BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040367
(400 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/418 (50%), Positives = 276/418 (66%), Gaps = 19/418 (4%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F+++++M+P+PP + SFN L G +AK K Y V+SL+KR++ GL PD T NILIN
Sbjct: 77 FSVFNHLIDMQPTPP-ISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILIN 135
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C+C + +V G VLG +LR +PN VTFTSL+KGLC SRI EA L K+ G P
Sbjct: 136 CYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRP 195
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------------EGFVD 162
NV TY TL+NGL TG+T++A+ L EEM +GNG FGV +G +D
Sbjct: 196 NVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLID 255
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
K KELFL+MK I+PDVV Y+S+I G C+ W AK L EM+D+GV PNVVTFNV++
Sbjct: 256 KGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLI 315
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
D LCK GKM+EA+ LL LMIQ G P+ F YNTL+DGFCL GR++ A++LFVSMES G
Sbjct: 316 DALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIE 375
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
SY++LINGYCK+ + A LY EM+ K I P V+ YNTL LF +V A+ L
Sbjct: 376 TDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNL 435
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
F EM+ + ++ TY +DGLCKN+++ EA+ELF L + I+ +NCLIDGL
Sbjct: 436 FGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGL 493
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 181/367 (49%), Gaps = 23/367 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + + L K+ D LF + G+ PD+ Y+ +I+ C GR +
Sbjct: 236 PNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGL 295
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ PN VTF LI LC ++ EA L + G P+ FTYNTLI+G
Sbjct: 296 FNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDG--- 352
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
F +EG +D A++LF+ M+ + I D V+Y +I G+C +
Sbjct: 353 --------------------FCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSG 392
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EAK L EMM + + P V+T+N ++ L + GK+ +A L M + P + YN
Sbjct: 393 RMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYN 452
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DG C ++ A ELF +E+ ++ ++ LI+G CK ++IE A L+ + +
Sbjct: 453 ILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHE 512
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G++P+V+ Y + L + Q+E A LF M+ G A + T+ T + G C+N + +
Sbjct: 513 GLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKV 572
Query: 375 VELFRTL 381
VEL + +
Sbjct: 573 VELLQEM 579
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 178/366 (48%), Gaps = 23/366 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ + + ++ LF + G+ P++ T+N+LI+ CK G++ +
Sbjct: 271 PDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHL 330
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ +P+ T+ +LI G C E RI +A LF + G E + +YN LING +
Sbjct: 331 LKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCK 390
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+G + +AK+L+ +M + I P V+TY +++ G
Sbjct: 391 SGRMV-----------------------EAKKLYREMMCKEIMPTVITYNTLLTGLFREG 427
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+A L EM + P T+N+++D LCKN + EA L + +P+ ++N
Sbjct: 428 KVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFN 487
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DG C ++ A+ELF + G V +Y+++I+G CK+ ++E A L+ M K
Sbjct: 488 CLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEK 547
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G P++V +NTL + ++++ +L EM + D T +D L K+ E
Sbjct: 548 GCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREY 607
Query: 375 VELFRT 380
+ L T
Sbjct: 608 LHLLPT 613
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 150/313 (47%), Gaps = 12/313 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FN+L L K + L K + G PD +TYN LI+ FC GR+ +
Sbjct: 306 PNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDL 365
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ +AV++ LI G C R++EA L+ ++ P V TYNTL+ GL+R
Sbjct: 366 FVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFR 425
Query: 135 TGHTIVALNLFEEMA-------SGNGEFGVEGF-----VDKAKELFLQMKDENINPDVVT 182
G A NLF EM S ++G + +A ELF +++ + P +
Sbjct: 426 EGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQI 485
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ +I G C A A+ L + +G++PNV+T+ V++ LCK+G+++ A L M
Sbjct: 486 FNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGME 545
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G PN +NTLM GFC + + EL M + + SI+++ K+++
Sbjct: 546 EKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYR 605
Query: 303 GALSLYGEMLSKG 315
L L ++G
Sbjct: 606 EYLHLLPTFPAQG 618
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 113/244 (46%), Gaps = 6/244 (2%)
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
+A +F + D P + ++ +++ + + L M G+ P+ +T N+++
Sbjct: 75 EAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILI 134
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
+ C K+D +L M++ G PN + +L+ G CL R++ A L M MG
Sbjct: 135 NCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYR 194
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKG------IKPDVVIYNTLFVVLFEIHQV 336
V +Y L+NG C A+ L+ EML+ IKP++V Y T+ L + +
Sbjct: 195 PNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLI 254
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
++ +LF EM+ G++ D Y + I G+C A LF + ++ +N L
Sbjct: 255 DKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVL 314
Query: 397 IDGL 400
ID L
Sbjct: 315 IDAL 318
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 8/231 (3%)
Query: 178 PDVVTYTSVIRGFCYAN--DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
PD + ++ C + +EA + ++D P + +FN ++ + K + +
Sbjct: 53 PDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVI 112
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
L M IG+ P+ N L++ +C +V+ + M G + +++ L+ G
Sbjct: 113 SLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGL 172
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG----- 350
C I A L +M+ G +P+VV Y TL L A KL +EM
Sbjct: 173 CLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGV 232
Query: 351 -VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + Y T ID LCK+ I + ELF ++ D+ AY+ +I G+
Sbjct: 233 TIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGM 283
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/418 (46%), Positives = 266/418 (63%), Gaps = 19/418 (4%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F FD M+ P PP + SFN L G LAK HY + SL+ + GL PDL+T +IL N
Sbjct: 76 FHFFDLMMRSHPIPP-ISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILAN 134
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C C + RVS + ILR + PN VT+T+LIKGLC E RI EA LF +++ GC P
Sbjct: 135 CLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTP 194
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE------------------GFVD 162
N TY TLI GL +TG+ +AL L +EM + ++GV G D
Sbjct: 195 NAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRED 254
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
+AKELF +MK + + PDV++Y+++I GFC A W+++K L EM+DQGVQP++VTF+V++
Sbjct: 255 EAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLI 314
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
D LCK GK+ EA +LL++MIQ G+ PN YN+L+DGFC+ G +N A+ELF+SM S G
Sbjct: 315 DTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLE 374
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
SY+ LINGYCK +++ A++LY EML G P+V Y TL LF+ +V A KL
Sbjct: 375 PDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKL 434
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
F M+ GV+A++ Y F+DGLCKN + EA+ELF L+ +L+I Y+CLIDGL
Sbjct: 435 FGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGL 492
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 122/280 (43%), Gaps = 50/280 (17%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N L ++ LF + S GL PD +Y LIN +CK +V +
Sbjct: 340 PNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNL 399
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+L+ +PN T+ +L+KGL + ++ +A LF ++ +G N Y ++GL +
Sbjct: 400 YNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCK 459
Query: 135 TGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKDENINPDVVT 182
A+ LF E+ S N + +E G ++ A ELF ++ E + PDVVT
Sbjct: 460 NDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVT 519
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN----------------------- 219
Y +I GFC + A L +M + G P+++ +N
Sbjct: 520 YNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMV 579
Query: 220 ------------VIMDELCKNGKMDEASRLLDLMIQIGVR 247
+++D LCK+ K + +DL+ + V+
Sbjct: 580 QKDVSPNAASCTIVVDMLCKDEKY---KKFVDLLPKFPVQ 616
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 86/183 (46%), Gaps = 8/183 (4%)
Query: 226 CKNGKMD--EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
CK G + +A DLM++ P +N L+ G ++ L+ M G +
Sbjct: 65 CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
+F+ SIL N C + AL+ +L +G P+VV Y TL L H++ A +LF
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL------RILKCELDIRAYNCLI 397
MQ+ G + TY T I GLC+ + A++L + + + C+ + Y+ +I
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIII 244
Query: 398 DGL 400
DGL
Sbjct: 245 DGL 247
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/418 (46%), Positives = 262/418 (62%), Gaps = 19/418 (4%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F F M+ P+PP + SF L LAK KHY V L+ ++ +G+ PD T NIL+N
Sbjct: 81 FQFFHLMMYSNPTPP-LSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLN 139
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C C + RV G V+ ILR + P+ VT+T+LIKGLC E RI +AA LFT+++ GC P
Sbjct: 140 CLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTP 199
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------------EGFVD 162
N TY TL+ GL RTG+ +AL L +EM + + +G+ + D
Sbjct: 200 NAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRED 259
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
+A++LF +MK + + P V++YTS+I GFC W EAK L EM++QGVQPNVVTFNV++
Sbjct: 260 EARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLI 319
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
D LCK GK+ EA LL++MIQ G+ PN YN+L++GFCL G +N A+ELFVSM S GC
Sbjct: 320 DVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCE 379
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
V Y++LINGYCK ++E A+ LY ML G +PDV Y L LF+ +V A KL
Sbjct: 380 PDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKL 439
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
F M+ G+ D + Y F++GLCKN + EA+ELF L+ +LDI +NCLIDGL
Sbjct: 440 FGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGL 497
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 155/320 (48%), Gaps = 12/320 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+ L ++ LF + + G+ P++ T+N+LI+ CK G+V +
Sbjct: 275 PTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDL 334
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ PN +T+ SLI+G C + A LF + GCEP+V Y LING +
Sbjct: 335 LEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCK 394
Query: 135 TGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKDENINPDVVT 182
T A+ L+ M V+ G V AK+LF MK I D+
Sbjct: 395 TSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYI 454
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y + G C EA L ++ ++ ++ FN ++D LCK GK++ A L + +
Sbjct: 455 YGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLP 514
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q ++P+ YN ++ FC G+V +A LF ME GCT +Y+ LI G+ ++K++E
Sbjct: 515 QEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLE 574
Query: 303 GALSLYGEMLSKGIKPDVVI 322
+ L M+ + + DV I
Sbjct: 575 KVVELLHMMVQRDVSLDVNI 594
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 121/244 (49%), Gaps = 6/244 (2%)
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
+A + F M N P + ++T ++ G +++ L +M G+ P+ T N+++
Sbjct: 79 QAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILL 138
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
+ LC ++ E ++ +++ G P+ Y TL+ G C+ R+++A LF M+ +GCT
Sbjct: 139 NCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCT 198
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSK----GI--KPDVVIYNTLFVVLFEIHQV 336
+Y L+ G C+ I AL L+ EML+ GI KP V+ Y+ + L + +
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRE 258
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
+ A LF+EM+ G+ +Y + I G C EA LF + + ++ +N L
Sbjct: 259 DEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVL 318
Query: 397 IDGL 400
ID L
Sbjct: 319 IDVL 322
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 187/414 (45%), Positives = 264/414 (63%), Gaps = 19/414 (4%)
Query: 6 YMLNMRPSP-PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCK 64
+ L MR +P P + SFN L LAK KHY V SL+ ++ +GL D T NIL+NC C
Sbjct: 57 FHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCN 116
Query: 65 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFT 124
+ R+ GF ILR ++PN VT+ +LIKGLC E RI EA LF +++ GC P+V T
Sbjct: 117 VNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVT 176
Query: 125 YNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE------------------GFVDKAKE 166
Y TLI GL TG+ +AL L +EM + + + G D+AK+
Sbjct: 177 YGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQ 236
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
LF +MK + + P +++Y S+I GFC A W E+K LL EM+DQG+QP++VTFNV++D LC
Sbjct: 237 LFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLC 296
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
K GK+ EA +LL +MI+ G+ P+ YN+L++GFC+ G +N A+ELFVSM S GC V
Sbjct: 297 KEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVI 356
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
SY++LINGY K ++E A+ LY EML G +P+V+ Y++L +F +V+ A KLF M
Sbjct: 357 SYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVM 416
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ G+A +++TY F+DGLCKN + EA++LF L+ +L+I NCLIDGL
Sbjct: 417 KAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGL 470
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 115/243 (47%), Gaps = 6/243 (2%)
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
A F M P + ++ ++ G +++ L +M G+ + T N++++
Sbjct: 53 ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN 112
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
LC ++ E +++ G PN YNTL+ G C+ R++ A LF+ M+ +GCT
Sbjct: 113 CLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTP 172
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSK------GIKPDVVIYNTLFVVLFEIHQVE 337
V +Y LI G C I AL L+ EML+ KP+V+ YN + L ++ + +
Sbjct: 173 DVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGRED 232
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
A +LF+EM+ G+ +Y + I G C E+ L + + D+ +N LI
Sbjct: 233 EAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLI 292
Query: 398 DGL 400
D L
Sbjct: 293 DTL 295
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 361 bits (927), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 190/418 (45%), Positives = 259/418 (61%), Gaps = 27/418 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F F M+ P+PP + SF L LAK KHY V L+ ++ +G+ PD T NIL+N
Sbjct: 81 FQFFHLMMYSNPTPP-LSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLN 139
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C C + RV G V+ ILR + P+ VT+T+LIKGLC E RI +AA LFT+++ GC P
Sbjct: 140 CLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTP 199
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------------EGFVD 162
N TY TL+ GL RTG+ +AL L +EM + + +G+ + D
Sbjct: 200 NAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRED 259
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
+A++LF +MK + + P V++YTS++ W EAK L EM++QGVQPNVVTFNV++
Sbjct: 260 EARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLI 311
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
D LCK GK+ EA LL++MIQ G+ PN YN+L++GFCL G +N A+ELFVSM S GC
Sbjct: 312 DVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCE 371
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
V Y++LINGYCK ++E A+ LY ML G +PDV Y L LF+ +V A KL
Sbjct: 372 PDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKL 431
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
F M+ G+ D + Y F++GLCKN + EA+ELF L+ +LDI +NCLIDGL
Sbjct: 432 FGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGL 489
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 126/270 (46%), Gaps = 33/270 (12%)
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
+A + F M N P + ++T ++ G +++ L +M G+ P+ T N+++
Sbjct: 79 QAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILL 138
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
+ LC ++ E ++ +++ G P+ Y TL+ G C+ R+++A LF M+ +GCT
Sbjct: 139 NCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCT 198
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSK----GI--KPDVVIYNTLFVV------- 329
+Y L+ G C+ I AL L+ EML+ GI KP V+ Y+ +
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRE 258
Query: 330 -----LFEIHQV---------------ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
LFE +V E A +LF+EM GV + T+ ID LCK
Sbjct: 259 DEARDLFEEMKVQGMTPTVISYTSLMWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEG 318
Query: 370 YIVEAVELFRTLRILKCELDIRAYNCLIDG 399
++EA +L + ++ YN LI+G
Sbjct: 319 KVIEAKDLLEVMIQRGIVPNLLTYNSLIEG 348
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 58/116 (50%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+ I L KN + LF +L S + D+ +N LI+ CK G++ + + ++
Sbjct: 447 YGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLP 506
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRT 135
+ P+ VT+ +I C ++++A LF K+ GC P+ TY TLI G + +
Sbjct: 507 QEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFES 562
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 62/142 (43%), Gaps = 2/142 (1%)
Query: 261 CLTGRVN--RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
C TG + +A + F M T + S++ L++G K K LY +M GI P
Sbjct: 70 CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
D N L L +++V + + R G D TY T I GLC I +A LF
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
++ L C + Y L+ GL
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGL 211
>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 628
Score = 343 bits (881), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 182/418 (43%), Positives = 261/418 (62%), Gaps = 32/418 (7%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ M++M+ +P + FN LFG LAK K Y V+S+ R+NS GL + + NIL+NC C
Sbjct: 95 FNQMIHMQTTPA-LSRFNNLFGALAKKKQYLHVISMCGRMNSIGLLKNFISLNILLNCLC 153
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ RV GFVV G ILR + PN TFT+L+KGLC E +I EA +F + VF C P+
Sbjct: 154 SVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFDCRPSAI 213
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------------EGFVDKAK 165
T LI+GL RTG+T AL L E M +GN +FG+ +G V++AK
Sbjct: 214 TCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKDGLVERAK 273
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
E F++MK++ I P+VVTYTS++ G C A++W EAK L IEM+D G+ P+VVTF+V++ L
Sbjct: 274 EFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGAL 333
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
CK GK+ EAS L DLM+Q V P+ YN L++G+CL G V+ K++F+SM + C H
Sbjct: 334 CKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDA 393
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
SYSIL+ YCK+ E+ GA+ LY EM+ +GI+P V+ Y+ +V A KLF E
Sbjct: 394 GSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYS----------KVGDARKLFGE 443
Query: 346 MQRDGVAADTWTYR---TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+Q + D+ +Y ++DGLCKN + EA+++F L K ++ +N LI+G+
Sbjct: 444 IQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGM 501
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 180/352 (51%), Gaps = 19/352 (5%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
P + +Y+ +I+ CK G V + PN VT+TSL+ GLC+ S EA L
Sbjct: 251 PTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRL 310
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE------------FGV 157
F ++ G P+V T++ LI L + G A LF+ M E + +
Sbjct: 311 FIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCL 370
Query: 158 EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
G VD+ K++FL M ++ D +Y+ +++ +C ++ + A L EMMD+G+QP V+T
Sbjct: 371 AGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVIT 430
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
++ + D G++ +LD + + +YN +DG C G V+ A ++F +E
Sbjct: 431 YSKVGDARKLFGEIQFQDMVLDSI-------SYSIYNVYLDGLCKNGCVSEALDVFYGLE 483
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
+ V ++ LING C+++++E A L+ + ++ ++PDVV Y + L ++ Q +
Sbjct: 484 NCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQ 543
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
+A+ LF EM+ G A + T+ T + GLC NS + VEL + K D
Sbjct: 544 KAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLHKMAARKLSPD 595
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 124/274 (45%), Gaps = 15/274 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +F++L G L K LF + + P TYNILI +C G V G +
Sbjct: 321 PDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKI 380
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ +A +++ L+K C +S + A L+ ++ G +P V TY+ + +
Sbjct: 381 FLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYSKVGDARKL 440
Query: 135 TGHTIVALNLFEEMASGNGEFGV----------EGFVDKAKELFLQMKDENINPDVVTYT 184
G F++M + + + G V +A ++F +++ +V +
Sbjct: 441 FGEI-----QFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFN 495
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
S+I G C + A L + ++ +QP+VVT+ +++ LCK G+ +A L M +
Sbjct: 496 SLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEK 555
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
G PN +NTLM G CL + EL M +
Sbjct: 556 GCAPNVVTFNTLMRGLCLNSERPKIVELLHKMAA 589
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 122/299 (40%), Gaps = 45/299 (15%)
Query: 142 LNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
L F E+ +G+F + +A F QM P + + ++ +
Sbjct: 73 LEQFLEINCKSGDFTLH----EALHFFNQMIHMQTTPALSRFNNLFGALAKKKQYLHVIS 128
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
+ M G+ N ++ N++++ LC ++ E + ++++ G RPN + L+ G C
Sbjct: 129 MCGRMNSIGLLKNFISLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLC 188
Query: 262 LTGRVNRAKELFVSM--------------------------------ESM---------G 280
L G++ A +F M E+M
Sbjct: 189 LEGKIGEAVRVFKIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGIN 248
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
C TV SYS +I+ CK+ +E A + EM KGI P+VV Y +L L + E A
Sbjct: 249 CKPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAK 308
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+LF EM G+ D T+ I LCK + EA LF + E R YN LI+G
Sbjct: 309 RLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEG 367
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 5/164 (3%)
Query: 242 IQIGVRPNAFVYNTL---MDGFCLTG--RVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+ I PN N L ++ C +G ++ A F M M T + ++ L
Sbjct: 59 LPINSTPNTQSDNPLEQFLEINCKSGDFTLHEALHFFNQMIHMQTTPALSRFNNLFGALA 118
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K K+ +S+ G M S G+ + + N L L + +V F +F + R G +T
Sbjct: 119 KKKQYLHVISMCGRMNSIGLLKNFISLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTR 178
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
T+ + GLC I EAV +F+ + + C LI GL
Sbjct: 179 TFTNLVKGLCLEGKIGEAVRVFKIMGVFDCRPSAITCGVLISGL 222
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 178/382 (46%), Positives = 240/382 (62%), Gaps = 17/382 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
SFN L LAK +HY V SL+K+++ GL+PDL T NILINC C + R++ G + I
Sbjct: 93 SFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGI 152
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+R + P+ VTFT+LIKGLC E RI+EA LF +++ GC PNV TY TLI GL G+
Sbjct: 153 MRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNI 212
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+AL +EM + D + +F N P+V++Y+ +I G C +W E
Sbjct: 213 NIALKWHQEMLN-----------DTSPYVF------NCRPNVISYSIIIDGLCKVGNWEE 255
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A CL EM+DQGVQPNVVTF+V++D LCK G++ +A +LL++MIQIG+ PN F Y +L+
Sbjct: 256 AICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIK 315
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
GFCL G +N AKELFVSM S G V SY++LINGYCK ++E A+ L+ EML G+ P
Sbjct: 316 GFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWP 375
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
DV L LF +V+ A +LF ++ + D F+DGLCKN YI EA++LF
Sbjct: 376 DVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLF 435
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
L +LDI + CLIDGL
Sbjct: 436 NELESYNMKLDIETFGCLIDGL 457
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 175/330 (53%), Gaps = 15/330 (4%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
Y+ N RP+ V S++I+ L K +++ + LF + G+ P++ T+++LI+ CK
Sbjct: 229 YVFNCRPN---VISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKE 285
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
G+V +L +++ PN T+TSLIKG C + A LF + G EP+V +Y
Sbjct: 286 GQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISY 345
Query: 126 NTLINGLYRTGHTIVALNLFEEM----------ASGN--GEFGVEGFVDKAKELFLQMKD 173
N LING +T A+ LF EM SG + G VD AKELF +K
Sbjct: 346 NMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKP 405
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
+ D+ + G C EA L E+ ++ ++ TF ++D LCK GK++
Sbjct: 406 YAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLET 465
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A L + + + G++P+A Y++++ GFC G+V++A LF ME GC+ + +YSIL+
Sbjct: 466 AWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMR 525
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
G+ ++ ++E + L M+ K + PD IY
Sbjct: 526 GFYESNKLEKVVQLLHRMIEKDVWPDDGIY 555
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 261 CLTGR--VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
C TG V +A + F M ++FS++ L+ G K + SLY +M G+ P
Sbjct: 70 CKTGSISVTQAHQFFDLM-----MRSIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWP 124
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
D++ N L L ++++ + R G D T+ T I GLC I+EA +LF
Sbjct: 125 DLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLF 184
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
++ L C ++ Y LI GL
Sbjct: 185 MRMQKLGCTPNVVTYGTLIKGL 206
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 79/193 (40%), Gaps = 6/193 (3%)
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
++ +FN ++ L K + L M G+ P+ N L++ C R+N
Sbjct: 90 SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAM 149
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
+ G V +++ LI G C I A L+ M G P+VV Y TL L +
Sbjct: 150 AGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCAL 209
Query: 334 HQVERAFKLFDEMQRD------GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
+ A K EM D + +Y IDGLCK EA+ LF + +
Sbjct: 210 GNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQ 269
Query: 388 LDIRAYNCLIDGL 400
++ ++ LID L
Sbjct: 270 PNVVTFSVLIDML 282
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 177/406 (43%), Positives = 249/406 (61%), Gaps = 28/406 (6%)
Query: 6 YMLNMRPSP-PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCK 64
+ L MR +P P + SFN L LAK KHY V SL+ ++ +GL D T NIL+NC C
Sbjct: 57 FHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCN 116
Query: 65 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFT 124
+ R+ GF ILR ++PN VT+ +LIKGLC E RI EA LF +++ GC P+V T
Sbjct: 117 VNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVT 176
Query: 125 YNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
Y TLI GL TG+ +AL L +EM + + + N P+V+TY
Sbjct: 177 YGTLIKGLCGTGNINIALKLHQEMLNDISRYEI-----------------NCKPNVITYN 219
Query: 185 SVIRGFCYANDWNEAKCLLI----------EMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
++ G C +EAK L EM+DQG+QP++VTFNV++D LCK GK+ EA
Sbjct: 220 IIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEA 279
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+LL +MI+ G+ P+ YN+L++GFC+ G +N A+ELFVSM S GC V SY++LING
Sbjct: 280 KKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLING 339
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
Y K ++E A+ LY EML G +P+V+ Y++L +F +V+ A KLF M+ G+A +
Sbjct: 340 YSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAEN 399
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++TY F+DGLCKN + EA++LF L+ +L+I NCLIDGL
Sbjct: 400 SYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGL 445
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 119/252 (47%), Gaps = 16/252 (6%)
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
A F M P + ++ ++ G +++ L +M G+ + T N++++
Sbjct: 53 ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN 112
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
LC ++ E +++ G PN YNTL+ G C+ R++ A LF+ M+ +GCT
Sbjct: 113 CLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTP 172
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSK------GIKPDVVIYNTLFVVLFEIHQVE 337
V +Y LI G C I AL L+ EML+ KP+V+ YN + L ++ + +
Sbjct: 173 DVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGRED 232
Query: 338 RAFKLFDEMQR----------DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
A +LF+EM+ G+ D T+ ID LCK ++EA +L +
Sbjct: 233 EAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIV 292
Query: 388 LDIRAYNCLIDG 399
D+ YN LI+G
Sbjct: 293 PDLVTYNSLIEG 304
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 169/384 (44%), Positives = 233/384 (60%), Gaps = 17/384 (4%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ SFN+L G LAK KHY V SL+K+++ GL P+ +T NILINC C + RV G +
Sbjct: 91 IISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMA 150
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
I+R + P+ VT+TSLIKGLC E RI EA LF +++ GC PNV TY TLI GL RTG
Sbjct: 151 GIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTG 210
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+ +AL L +EM +G + + N P++ +Y +I C W
Sbjct: 211 NINLALKLHQEMLNGTSPYAI-----------------NCKPNIFSYNIIIDELCKIGKW 253
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
EAK L EM+DQGV+P+VVTF+ ++D LCK G + EA + L+ M+ G+ P+ F + +L
Sbjct: 254 KEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSL 313
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
++GFCL G ++ AKELF+SM S G V SY++LI GYCK +E A+ LY EML G
Sbjct: 314 IEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGK 373
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
PD+ + L LF +V A KLF ++ V + + F+DGLCKN + EA+E
Sbjct: 374 WPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAME 433
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
LF L+ +LDI ++NCLIDGL
Sbjct: 434 LFNELKSYNMKLDIESFNCLIDGL 457
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 116/237 (48%), Gaps = 12/237 (5%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
D+ LF + S G PD+ +Y +LI +CK V + +LR P+ TF L
Sbjct: 324 DSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVL 383
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG 153
+KGL ++ +A LF ++ N++ + ++GL + G A+ LF E+ S N
Sbjct: 384 LKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNM 443
Query: 154 EFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
+ +E F ++ A ELF ++ E + PDVVTY +I GFC + A
Sbjct: 444 KLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANI 503
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
L M + G PN++T++ ++ KN K++E +LL MIQ V A +Y + D
Sbjct: 504 LFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVED 560
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 87/227 (38%), Gaps = 41/227 (18%)
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
++++FN+++ L K + L M G+ PN F N L++ C RV
Sbjct: 90 SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAM 149
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL--- 330
+ G V +Y+ LI G C I A L+ M G P+VV Y TL L
Sbjct: 150 AGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRT 209
Query: 331 ------FEIHQ--------------------------------VERAFKLFDEMQRDGVA 352
++HQ + A +LF+EM GV
Sbjct: 210 GNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVR 269
Query: 353 ADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
D T+ ID LCK ++EA + T+ + D+ + LI+G
Sbjct: 270 PDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEG 316
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 313 bits (803), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 169/409 (41%), Positives = 236/409 (57%), Gaps = 13/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ +L+M P PP + F L +AK KHY TVLSL +++S G+ P++YT NILIN FC
Sbjct: 44 FNRLLHMHP-PPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFC 102
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ RV F VL +IL+ P+ TFT+LI+GLC E +I EA LF K+ G +PNV
Sbjct: 103 HLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVV 162
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
TY TLINGL + G+T A+ L M GN + V + V +A LF QM
Sbjct: 163 TYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQM 222
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+PD+ TYTS++ C +W LL +M++ + P+VV F+ ++D LCK GK+
Sbjct: 223 VGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKV 282
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA ++D+MIQ GV P+ Y TLMDG CL ++ A ++F M G V SY+ L
Sbjct: 283 TEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTL 342
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
INGYCK +I+ A+ L+ EM K PD YNTL L + +++ A LF EM G
Sbjct: 343 INGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQ 402
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D TY +D LCKN ++ EA+ L + + DI+ YN +IDG+
Sbjct: 403 MPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGM 451
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 188/372 (50%), Gaps = 17/372 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + + L K++ +LF ++ G+ PD++TY L++ C + H +
Sbjct: 194 PDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTL 253
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ S P+ V F++++ LC E ++ EA + + G EP+V TY TL++G
Sbjct: 254 LNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCL 313
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
A+ +F+ M V + +DKA LF +M + PD T
Sbjct: 314 QSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKT 373
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++ G C+ +A L EM+ +G P++VT+++++D LCKN ++EA LL +
Sbjct: 374 YNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIE 433
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ P+ VYN ++DG C G + A++LF ++ S G +V++Y+I+I+G CK +
Sbjct: 434 ASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLN 493
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ EM PD YNT+ + ++ RA +L +EM G +AD T +
Sbjct: 494 EANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLV 553
Query: 363 -----DGLCKNS 369
DGL ++S
Sbjct: 554 EMLSDDGLDQSS 565
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 117/274 (42%), Gaps = 35/274 (12%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A F ++ + P +V + ++ ++ L +M GV PNV T N+
Sbjct: 37 LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C ++ A +L ++++G +P+ + TL+ G C+ G++ A LF M G
Sbjct: 97 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
V +Y LING CK A+ L M +PDVVIY ++ L + QV AF
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216
Query: 341 KLFDEMQRDGVAADTWTY-----------------------------------RTFIDGL 365
LF +M G++ D +TY T +D L
Sbjct: 217 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 276
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
CK + EA E+ + E D+ Y L+DG
Sbjct: 277 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDG 310
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 129/274 (47%), Gaps = 16/274 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+ + P V S+ L K D + LF+ + PD TYN L++
Sbjct: 323 VFDMMVR-KGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGL 381
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +GR+ + ++ P+ VT++ L+ LC + EA AL + P++
Sbjct: 382 CHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDI 441
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
YN +I+G+ R G A +LF ++S V G +++A +LF++
Sbjct: 442 QVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFME 501
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + +PD TY ++ RGF N+ A LL EM+ +G +V T ++++ L +G
Sbjct: 502 MDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDG- 560
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
+D++S L L + F++ + +GF L G
Sbjct: 561 LDQSSCFLMLSVLSEDDRRYFIF--IPEGFDLLG 592
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 169/409 (41%), Positives = 236/409 (57%), Gaps = 13/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ +L+M P PP + F L +AK KHY TVLSL +++S G+ P++YT NILIN FC
Sbjct: 53 FNRLLHMHP-PPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFC 111
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ RV F VL +IL+ P+ TFT+LI+GLC E +I EA LF K+ G +PNV
Sbjct: 112 HLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVV 171
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
TY TLINGL + G+T A+ L M GN + V + V +A LF QM
Sbjct: 172 TYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQM 231
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+PD+ TYTS++ C +W LL +M++ + P+VV F+ ++D LCK GK+
Sbjct: 232 VGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKV 291
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA ++D+MIQ GV P+ Y TLMDG CL ++ A ++F M G V SY+ L
Sbjct: 292 TEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTL 351
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
INGYCK +I+ A+ L+ EM K PD YNTL L + +++ A LF EM G
Sbjct: 352 INGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQ 411
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D TY +D LCKN ++ EA+ L + + DI+ YN +IDG+
Sbjct: 412 MPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGM 460
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 181/353 (51%), Gaps = 12/353 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + + L K++ +LF ++ G+ PD++TY L++ C + H +
Sbjct: 203 PDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTL 262
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ S P+ V F++++ LC E ++ EA + + G EP+V TY TL++G
Sbjct: 263 LNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCL 322
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
A+ +F+ M V + +DKA LF +M + PD T
Sbjct: 323 QSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKT 382
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++ G C+ +A L EM+ +G P++VT+++++D LCKN ++EA LL +
Sbjct: 383 YNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIE 442
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ P+ VYN ++DG C G + A++LF ++ S G +V++Y+I+I+G CK +
Sbjct: 443 ASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLN 502
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
A L+ EM PD YNT+ + ++ RA +L +EM G +AD+
Sbjct: 503 EANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADS 555
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 117/274 (42%), Gaps = 35/274 (12%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A F ++ + P +V + ++ ++ L +M GV PNV T N+
Sbjct: 46 LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C ++ A +L ++++G +P+ + TL+ G C+ G++ A LF M G
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
V +Y LING CK A+ L M +PDVVIY ++ L + QV AF
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 225
Query: 341 KLFDEMQRDGVAADTWTY-----------------------------------RTFIDGL 365
LF +M G++ D +TY T +D L
Sbjct: 226 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 285
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
CK + EA E+ + E D+ Y L+DG
Sbjct: 286 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDG 319
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 129/294 (43%), Gaps = 29/294 (9%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P + +++IL L KN+H + ++L K + ++ L PD+ YNI+I+ C+ G +
Sbjct: 409 RGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEA 468
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ + P+ T+ +I GLC + EA LF ++ C P+ TYNT+
Sbjct: 469 ARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIAR 528
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
G + T+ A+ L EEM + GF + L L + E+ D + + GF
Sbjct: 529 GFLQNNETLRAIQLLEEMLA-------RGFSADSCFLMLSVLSED---DRRYFIFIPEGF 578
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG-VRPN 249
W +C L E+ G E+ K+G +ASR L + VRP+
Sbjct: 579 DLLG-WEFMRCKLKELAKIG-------------EVSKSGT--KASRPLGGGHGLSLVRPD 622
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
+ N TG R++E+++ + + T + S + G ++ +G
Sbjct: 623 --LSNVNATKRMATGERKRSEEVWIEVGNEAYTSKLKDLSRFLVGRWDAEDEKG 674
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 164/409 (40%), Positives = 237/409 (57%), Gaps = 13/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML+ +P PP FN L +AK KH+ T+LSL ++++S G+ PD+YT I+IN C
Sbjct: 58 FNRMLHKQP-PPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLC 116
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ RV F L +IL+ P+A TFT+LI+GLC E +I EA LF K+ G +PNV
Sbjct: 117 HLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVV 176
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQM 171
TY TLINGL + G+T A+ L M GN + V F V +A +F +M
Sbjct: 177 TYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEM 236
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+P++VTY S+I G C +W L+ EM+D + P+V T N ++D LCK G +
Sbjct: 237 ITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMV 296
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA ++D+MI GV PN YN LMDG CL V+ A ++F +M C V SY+ L
Sbjct: 297 AEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTL 356
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
INGYCK + ++ A+ L+ EM + + P+ V YNTL L + +++ A LF EM G
Sbjct: 357 INGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQ 416
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D TYRT D LCKN ++ +A+ L + + + DI+ Y ++DG+
Sbjct: 417 IPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGM 465
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 186/375 (49%), Gaps = 15/375 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V F+ L L K++ ++F + + G+ P++ TYN LI+ CK+ H +
Sbjct: 208 PNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTL 267
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ ++ S P+ T +++ LC E + EA + + G EPNV TYN L++G
Sbjct: 268 MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL 327
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
VA+ +F+ M NG ++ VDKA LF +M + + P+ V
Sbjct: 328 RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQS-VDKAMYLFEEMSRQELTPNTV 386
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY ++I G C+ +A L EM+ +G P++VT+ + D LCKN +D+A LL +
Sbjct: 387 TYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAI 446
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
P+ +Y T++DG C G + A++LF ++ S G V++Y+I+I+G CK +
Sbjct: 447 EGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLL 506
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A L+ EM G P+ YN + ++ R +L +EM G + D T T
Sbjct: 507 AEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVST-TTL 565
Query: 362 IDGLCKNSYIVEAVE 376
+ G+ + + ++V+
Sbjct: 566 LVGMLSDDGLDQSVK 580
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 113/240 (47%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D+A F +M + P V + ++ + L +M G+ P+V T +
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ LC ++D A L ++++G +P+A + TL+ G C+ G++ A LF M G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
V +Y LING CK A+ L M +P+VV+++TL L + QV AF
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+F EM G++ + TY + I GLCK L + K D+ N ++D L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 117/246 (47%), Gaps = 14/246 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M++ + V S+N L K + D + LF+ ++ L P+ TYN LI+
Sbjct: 337 VFDTMVH-KDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGL 395
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +GR+ + ++ P+ VT+ +L LC + +A AL + +P++
Sbjct: 396 CHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDI 455
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
Y T+++G+ R G A +LF ++S + V +G + +A +LF +
Sbjct: 456 QIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSE 515
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M +P+ TY + RGF N+ LL EM+ +G +V T +++ L +G
Sbjct: 516 MNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG- 574
Query: 231 MDEASR 236
+D++ +
Sbjct: 575 LDQSVK 580
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%)
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
N +EA M+ + P+ V FN ++ + K L M G+ P+ +
Sbjct: 49 NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 108
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
+++ C RV+ A + +G +++ LI G C +I AL L+ +M+
Sbjct: 109 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 168
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+G +P+VV Y TL L ++ A +L M++ + + T ID LCK+ + E
Sbjct: 169 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTE 228
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A +F + +I YN LI GL
Sbjct: 229 AFNIFSEMITKGISPNIVTYNSLIHGL 255
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 311 bits (796), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 168/409 (41%), Positives = 236/409 (57%), Gaps = 13/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML+M P PP FN L +AK K Y TV SL +++S G+ PD+YT NILIN FC
Sbjct: 55 FNRMLHMHP-PPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFC 113
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ R F VL +IL+ P+ TFT+LI+GLC E +I +A LF K+ G +PNV
Sbjct: 114 HLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVV 173
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
TY TLINGL + G+T A+ L M GN + V + V +A LF +M
Sbjct: 174 TYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKM 233
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+PD+ TYTS+I C +W LL +M++ + P+VV F+ ++D LCK GK+
Sbjct: 234 VGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKI 293
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA ++D+MI GV PN YN LMDG CL ++ A ++F +M G V SY+ L
Sbjct: 294 TEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTL 353
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
INGYCK + ++ A L+ EM K + P+ V YNTL L + +++ A LF EM G
Sbjct: 354 INGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQ 413
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D TYR +D LCK S++ EA+ L +T+ + DI+ Y +IDG+
Sbjct: 414 IPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGM 462
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 183/366 (50%), Gaps = 12/366 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + + L K++ +LF ++ G+ PD++TY LI+ C + H +
Sbjct: 205 PDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTL 264
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ S P+ V F++++ LC E +I EA + + + G EPNV TYN L++G
Sbjct: 265 LNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCL 324
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
A+ +F+ M V + +DKA LF +M + + P+ VT
Sbjct: 325 QSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVT 384
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++ G C+ +A L EM+ G P++ T+ +++D LCK +DEA LL +
Sbjct: 385 YNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIE 444
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ P+ +Y ++DG C G + A+++F ++ S G V +Y+I+ING C+ ++
Sbjct: 445 GSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLD 504
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ EM G PD YNT+ L + + RA +L EM G +AD T +
Sbjct: 505 EANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLV 564
Query: 363 DGLCKN 368
+ LC +
Sbjct: 565 EMLCDD 570
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 141/293 (48%), Gaps = 23/293 (7%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ +R P V ++N L D + +F + G P++ +YN LIN +CK+
Sbjct: 302 MMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQ 361
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
R+ + + + PN VT+ +L+ GLC R+ +A ALF ++ G P++ TY
Sbjct: 362 RMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYR 421
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
L++ L + H +D+A L ++ N++PD+ YT V
Sbjct: 422 ILLDYLCKKSH-----------------------LDEAMALLKTIEGSNMDPDIQIYTIV 458
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G C A + A+ + + +G++PNV T+ ++++ LC+ G +DEA++L M G
Sbjct: 459 IDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGC 518
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
P+ YNT+ G RA +L M + G + V + ++L+ C +K
Sbjct: 519 SPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDK 571
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 117/274 (42%), Gaps = 35/274 (12%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A F +M + P V + ++ + L +M G+ P+V T N+
Sbjct: 48 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C + A +L ++++G++P+ + TL+ G C+ G++ A LF M G
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
V +Y LING CK A+ L M +PDVV+Y ++ L + QV AF
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227
Query: 341 KLFDEMQRDGVAADTWTY-----------------------------------RTFIDGL 365
LF +M G++ D +TY T +D L
Sbjct: 228 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 287
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
CK I EA ++ + I E ++ YN L+DG
Sbjct: 288 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDG 321
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 117/246 (47%), Gaps = 14/246 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M++ P V S+N L K + D LF+ + L P+ TYN L++
Sbjct: 334 VFDTMVH-NGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGL 392
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +GR+ + ++ P+ T+ L+ LC +S + EA AL + +P++
Sbjct: 393 CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDI 452
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQ 170
Y +I+G+ R G A ++F ++S V G +D+A +LF++
Sbjct: 453 QIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFME 512
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M +PD TY ++ +G + A LL EM+ +G +V T ++++ LC + K
Sbjct: 513 MDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDD-K 571
Query: 231 MDEASR 236
+D++ +
Sbjct: 572 LDQSVK 577
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%)
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
N ++A M+ P+ V FN ++ + K + L + M G+ P+ +
Sbjct: 46 NTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTL 105
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N L++ FC R A + + +G +++ LI G C +I AL L+ +M+
Sbjct: 106 NILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIG 165
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+G +P+VV Y TL L ++ A +L M++ D Y + ID LCK+ + E
Sbjct: 166 EGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTE 225
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A LF + DI Y LI L
Sbjct: 226 AFNLFSKMVGQGISPDIFTYTSLIHSL 252
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 311 bits (796), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 164/409 (40%), Positives = 237/409 (57%), Gaps = 13/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML+ +P PP FN L +AK KH+ T+LSL ++++S G+ PD+YT I+IN C
Sbjct: 58 FNRMLHKQP-PPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLC 116
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ RV F L +IL+ P+A TFT+LI+GLC E +I EA LF K+ G +PNV
Sbjct: 117 HLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVV 176
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQM 171
TY TLINGL + G+T A+ L M GN + V F V +A +F +M
Sbjct: 177 TYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEM 236
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+P++VTY S+I G C +W L+ EM+D + P+V T N ++D LCK G +
Sbjct: 237 ITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMV 296
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA ++D+MI GV PN YN LMDG CL V+ A ++F +M C V SY+ L
Sbjct: 297 AEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTL 356
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
INGYCK + ++ A+ L+ EM + + P+ V YNTL L + +++ A LF EM G
Sbjct: 357 INGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQ 416
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D TYRT D LCKN ++ +A+ L + + + DI+ Y ++DG+
Sbjct: 417 IPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGM 465
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 186/375 (49%), Gaps = 15/375 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V F+ L L K++ ++F + + G+ P++ TYN LI+ CK+ H +
Sbjct: 208 PNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTL 267
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ ++ S P+ T +++ LC E + EA + + G EPNV TYN L++G
Sbjct: 268 MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL 327
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
VA+ +F+ M NG ++ VDKA LF +M + + P+ V
Sbjct: 328 RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQS-VDKAMYLFEEMSRQELTPNTV 386
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY ++I G C+ +A L EM+ +G P++VT+ + D LCKN +D+A LL +
Sbjct: 387 TYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAI 446
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
P+ +Y T++DG C G + A++LF ++ S G V++Y+I+I+G CK +
Sbjct: 447 EGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLL 506
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A L+ EM G P+ YN + ++ R +L +EM G + D T T
Sbjct: 507 AEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVST-TTL 565
Query: 362 IDGLCKNSYIVEAVE 376
+ G+ + + ++V+
Sbjct: 566 LVGMLSDDGLDQSVK 580
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 113/240 (47%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D+A F +M + P V + ++ + L +M G+ P+V T +
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ LC ++D A L ++++G +P+A + TL+ G C+ G++ A LF M G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
V +Y LING CK A+ L M +P+VV+++TL L + QV AF
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+F EM G++ + TY + I GLCK L + K D+ N ++D L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 117/246 (47%), Gaps = 14/246 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M++ + V S+N L K + D + LF+ ++ L P+ TYN LI+
Sbjct: 337 VFDTMVH-KDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGL 395
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +GR+ + ++ P+ VT+ +L LC + +A AL + +P++
Sbjct: 396 CHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDI 455
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
Y T+++G+ R G A +LF ++S + V +G + +A +LF +
Sbjct: 456 QIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSE 515
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M +P+ TY + RGF N+ LL EM+ +G +V T +++ L +G
Sbjct: 516 MNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG- 574
Query: 231 MDEASR 236
+D++ +
Sbjct: 575 LDQSVK 580
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%)
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
N +EA M+ + P+ V FN ++ + K L M G+ P+ +
Sbjct: 49 NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 108
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
+++ C RV+ A + +G +++ LI G C +I AL L+ +M+
Sbjct: 109 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 168
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+G +P+VV Y TL L ++ A +L M++ + + T ID LCK+ + E
Sbjct: 169 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTE 228
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A +F + +I YN LI GL
Sbjct: 229 AFNIFSEMITKGISPNIVTYNSLIHGL 255
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 166/409 (40%), Positives = 235/409 (57%), Gaps = 13/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML M+P PP FN L +AK KH+ T+LSL +++S G+ P++YT +ILIN FC
Sbjct: 49 FNRMLRMQP-PPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFC 107
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ RV F VL +IL+ P+ TFT+LI+G+ E +I EA LF K+ G P+V
Sbjct: 108 HLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVV 167
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQM 171
TY TLINGL + G+T A+ L M N + V + V +A LF +M
Sbjct: 168 TYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEM 227
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+PD+ TY S+I C +W LL EM+D + P+VV+FN ++D LCK GK+
Sbjct: 228 VTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKV 287
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA ++D MIQ GV PN Y LMDG CL ++ A ++F +M GC V SY+ L
Sbjct: 288 TEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTL 347
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
INGYCK + I+ A+ L+GEM + + PD V Y+TL L + +++ A LF EM
Sbjct: 348 INGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQ 407
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ TYR +D LCKN Y+ EA+ L + + + DI+ N IDG+
Sbjct: 408 IPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGM 456
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 188/378 (49%), Gaps = 14/378 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + L K++ +LF + + G+ PD++TYN LI+ C + H +
Sbjct: 199 PNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATL 258
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ S P+ V+F +++ LC E ++ EA + K+ G EPNV TY L++G
Sbjct: 259 LNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCL 318
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
A+ +F+ M NG ++ +DKA LF +M + + PD V
Sbjct: 319 LSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQR-IDKAMYLFGEMCRQELIPDTV 377
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY+++I G C+ +A L EM+ PN+VT+ +++D LCKN + EA LL +
Sbjct: 378 TYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAI 437
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ P+ V N +DG C G + A++LF ++ S G V++YSI+ING C+ +
Sbjct: 438 EGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLL 497
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A L+ EM G + IYNT+ ++ RA +L EM G +AD T F
Sbjct: 498 DEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLF 557
Query: 362 IDGLCKNSYIVEAVELFR 379
+ L + ++ R
Sbjct: 558 VKMLSDDGLDQSLKQILR 575
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 111/240 (46%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A F +M P V + ++ + L +M G+ PN+ T ++
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C ++ A +L ++++G +P+ + TL+ G + G++ A LF M G
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEG 161
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
V +Y LING CK A+ L G M+ K +P+V YNT+ L + QV AF
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LF EM G++ D +TY + I LC L + K D+ ++N ++D L
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 111/253 (43%), Gaps = 13/253 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+ + P V S+N L K + D + LF + L PD TY+ LI+
Sbjct: 328 VFDTMV-CKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGL 386
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C + R+ + ++ PN VT+ L+ LC + EA AL + +P++
Sbjct: 387 CHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDI 446
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
N I+G+ R G A +LF ++S + V G +D+A +LF +
Sbjct: 447 QVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFRE 506
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + + Y ++ RGF N+ + A LL EM+ +G + T + + L +G
Sbjct: 507 MDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGL 566
Query: 231 MDEASRLLDLMIQ 243
++L +Q
Sbjct: 567 DQSLKQILREFVQ 579
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 306 bits (785), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 161/409 (39%), Positives = 240/409 (58%), Gaps = 13/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F ML M P P V F G +AK K Y TV+SL +++ G+ ++Y+ NILINC C
Sbjct: 80 FYRMLRMNPRPS-VVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLC 138
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
++ V VLG++ + P+A+TF +LI G C E I EA LF ++ G +P+V
Sbjct: 139 RLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVI 198
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
+Y+T+INGL ++G+T +AL L +M + + + V+ A +L +M
Sbjct: 199 SYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEM 258
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
D I PDVVTY++++ GFC NEA L EM+ + V PN VTF +++D LCK G +
Sbjct: 259 VDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMV 318
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA + + M + G PNA+ YN LMDG+CL +++ A+++ M GC V SY+IL
Sbjct: 319 SEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNIL 378
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
INGYCK + ++ A SL EM K + PD V Y+TL L ++ + + A LF EM G+
Sbjct: 379 INGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGL 438
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D TY T +DGLCK+ ++ EA++L ++++ K E DI YN LI+G+
Sbjct: 439 LPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGM 487
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 184/361 (50%), Gaps = 12/361 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++ + L K+ + + L + G+ PD+ TY+ +++ FC +G ++ ++
Sbjct: 230 PNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATIL 289
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ PN VTFT L+ GLC E + EA +F + G EPN +TYN L++G
Sbjct: 290 FNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCL 349
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
A + + M V + +D+AK L ++M ++ + PD VT
Sbjct: 350 NNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVT 409
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+++++G C EA L EM G+ P+++T++ ++D LCK+G +DEA +LL M
Sbjct: 410 YSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQ 469
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ + P+ +YN L++G + G++ AKELF + + G T+ +Y+I+I G K +
Sbjct: 470 ESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSD 529
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ +M G P+ YN + + A +L DEM +AD+ T++ +
Sbjct: 530 EAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589
Query: 363 D 363
D
Sbjct: 590 D 590
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 115/240 (47%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A F +M N P VV + + ++ L +M GV NV + N+
Sbjct: 73 IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ LC+ + A +L M ++G++P+A +NTL++G C+ G + A LF M G
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
V SYS +ING CK+ AL L +M KG KP++V Y T+ L + V A
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
L EM G+ D TY T + G C ++ EA LF + + + L+DGL
Sbjct: 253 DLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGL 312
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 167/409 (40%), Positives = 236/409 (57%), Gaps = 14/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML+M P PP FN L +AK K Y TV SL +++S G+ PD+YT NILIN FC
Sbjct: 57 FNRMLHMHP-PPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFC 115
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ R+ F VL +IL+ P+ TFT+LI+GLC E +I +A LF K+ G +PNV
Sbjct: 116 HLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVV 175
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
TY TLINGL + G+T A+ L M GN + V + V +A LF +M
Sbjct: 176 TYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKM 235
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+PD+ TYTS+I C +W LL +M++ + P+VV F+ ++D LCK GK+
Sbjct: 236 VGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKI 295
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA ++D+MI GV PN YN LMDG CL ++ A ++F +M G V SY+ L
Sbjct: 296 TEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTL 355
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
INGYCK + ++ A L+ EM K + P+ V YNTL + +++ A LF EM G
Sbjct: 356 INGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXC-HVGRLQDAIALFHEMVAHGQ 414
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D TYR +D LCK S++ EA+ L +T+ + DI+ Y +IDG+
Sbjct: 415 IPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGM 463
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 182/366 (49%), Gaps = 13/366 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + + L K++ +LF ++ G+ PD++TY LI+ C + H +
Sbjct: 207 PDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTL 266
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ S P+ V F++++ LC E +I EA + + + G EPNV TYN L++G
Sbjct: 267 LNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCL 326
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
A+ +F+ M V + +DKA LF +M + + P+ VT
Sbjct: 327 QSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVT 386
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++ C+ +A L EM+ G P++ T+ +++D LCK +DEA LL +
Sbjct: 387 YNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIE 445
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ P+ +Y ++DG C G + A+++F ++ S G V +Y+I+ING C+ ++
Sbjct: 446 GSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLD 505
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ EM G PD YNT+ L + + RA +L EM G +AD T +
Sbjct: 506 EANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLV 565
Query: 363 DGLCKN 368
+ LC +
Sbjct: 566 EMLCDD 571
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 158/356 (44%), Gaps = 47/356 (13%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F M+ SP + ++ L L + V +L ++ ++ + PD+ ++ +++
Sbjct: 229 FNLFSKMVGQGISPD-IFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVD 287
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK G+++ V+ ++ PN VT+ +L+ G C +S + EA +F + G P
Sbjct: 288 ALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAP 347
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMAS------------------------------ 150
NV +YNTLING + A LFEEM
Sbjct: 348 NVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHVGRLQDAIALFH 407
Query: 151 ---GNGEFG-------------VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+G+ + +D+A L ++ N++PD+ YT VI G C A
Sbjct: 408 EMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAG 467
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ A+ + + +G++PNV T+ ++++ LC+ G +DEA++L M G P+ YN
Sbjct: 468 ELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYN 527
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
T+ G RA +L M + G + V + ++L+ C +K + + E
Sbjct: 528 TITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSE 583
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 117/274 (42%), Gaps = 35/274 (12%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A F +M + P V + ++ + L +M G+ P+V T N+
Sbjct: 50 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C ++ A +L ++++G +P+ + TL+ G C+ G++ A LF M G
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
V +Y LING CK A+ L M +PDVV+Y ++ L + QV AF
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229
Query: 341 KLFDEMQRDGVAADTWTY-----------------------------------RTFIDGL 365
LF +M G++ D +TY T +D L
Sbjct: 230 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 289
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
CK I EA ++ + I E ++ YN L+DG
Sbjct: 290 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDG 323
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%)
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
N ++A M+ P+ V FN ++ + K + L + M G+ P+ +
Sbjct: 48 NTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTL 107
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N L++ FC R+ A + + +G +++ LI G C +I AL L+ +M+
Sbjct: 108 NILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIG 167
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+G +P+VV Y TL L ++ A +L M++ D Y + ID LCK+ + E
Sbjct: 168 EGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTE 227
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A LF + DI Y LI L
Sbjct: 228 AFNLFSKMVGQGISPDIFTYTSLIHSL 254
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 162/409 (39%), Positives = 236/409 (57%), Gaps = 13/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML+M+P PP V F + +A KHY TVLSL K+++S G+ D+YT I+IN FC
Sbjct: 62 FNRMLHMQP-PPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFC 120
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ RV GF VL +I + P+ TFT+LI+GLC E +I EA LF K+ G +PN
Sbjct: 121 HLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGV 180
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQM 171
TY TLI+GL + G++ A+ L M N E V + V++A +F +M
Sbjct: 181 TYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEM 240
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+P+V TY S+I G C ++W L+ EM+D + PNVV F ++D LCK G +
Sbjct: 241 IAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMV 300
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
A ++D+MIQ GV P+ Y LMDG CL ++ A ++F +M GC V SYS L
Sbjct: 301 TIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTL 360
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
INGYCK + I+ A+ L+ EM + + P++V YNTL L + ++ A LF EM G
Sbjct: 361 INGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQ 420
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D TYR +D LCK ++ +A+ + + + DI++YN +IDG+
Sbjct: 421 IPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGM 469
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 178/366 (48%), Gaps = 12/366 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + CL K++ + L++F + + G+ P++ TYN +I+ CK H +
Sbjct: 212 PNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATL 271
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ ++ S PN V FT+L+ LC E + A + + G EP+V TY L++G
Sbjct: 272 MNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCL 331
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
A +F+ M V + +DKA LF +M + P++VT
Sbjct: 332 RSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVT 391
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G C+ +A L EM+ G P++VT+ +++D LCK +D+A +L +
Sbjct: 392 YNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIE 451
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ P+ YN ++DG C G + A +LF S+ S G V++Y+I+ING C +
Sbjct: 452 GSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLA 511
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ EM + G PD YN + ++ A +L EM G +AD T +
Sbjct: 512 EATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIV 571
Query: 363 DGLCKN 368
+ L +
Sbjct: 572 EMLSDD 577
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 111/240 (46%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D+A F +M P VV + ++ ++ L +M G+ +V T +
Sbjct: 55 IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C ++D +L + ++G +P+ + TL+ G C+ G++ A LF M G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
+Y LI+G CK A+ L M+ K +P+V+ YNT+ LF+ QV A
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+F EM G++ + TY + I GLCK S L + K ++ + L+D L
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDAL 294
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 121/254 (47%), Gaps = 15/254 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+ + P V S++ L K + D + LF+ + L P++ TYN LI+
Sbjct: 341 VFDTMVR-KGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGL 399
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +GR+ + ++ S P+ VT+ L+ LC + +A A+ + P++
Sbjct: 400 CHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDI 459
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFL 169
+YN +I+G+ R G A +LF ++S NG ++G + +A +LF
Sbjct: 460 QSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMING-LCLQGLLAEATKLFR 518
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M + +PD TY + RGF N+ A LL EM+ +G + T +I++ L +G
Sbjct: 519 EMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDG 578
Query: 230 KMDEASRLLDLMIQ 243
++L +Q
Sbjct: 579 LDQSVKQILHEFVQ 592
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%)
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
N +EA M+ P+VV F I+ + L M +G+ + +
Sbjct: 53 NTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTL 112
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
+++ FC RV+ + + +G +++ LI G C +I AL L+ +M+
Sbjct: 113 AIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVG 172
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+G +P+ V Y TL L ++ A +L M + + TY T ID L K+ + E
Sbjct: 173 EGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNE 232
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A+ +F + ++ YN +I GL
Sbjct: 233 ALNIFSEMIAKGISPNVSTYNSIIHGL 259
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 166/409 (40%), Positives = 232/409 (56%), Gaps = 13/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML+M P PP + F L + K KHY TVLSL +++S G+ P++YT NILIN FC
Sbjct: 56 FNRMLHMHP-PPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFC 114
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ R+ F VL +IL+ PN TF +LI+GLC E +I E LF K+ G +PNV
Sbjct: 115 HLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVV 174
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQM 171
TY TLINGL + G T A+ L M GN + V + V +A LF +M
Sbjct: 175 TYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEM 234
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+P + TY S+I C +W LL EM++ + PNVV F+ ++D LCK GK+
Sbjct: 235 IHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKV 294
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA ++D+MI+ GV PN YN LMDG CL ++ A ++F +M G V SYS L
Sbjct: 295 MEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTL 354
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
INGYCK + IE A+ L+ EM K + P+ V Y+TL L + +++ A LF EM G
Sbjct: 355 INGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQ 414
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D +Y +D LCKN + EA+ L + + + DI+ Y +IDG+
Sbjct: 415 IPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGM 463
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 183/366 (50%), Gaps = 12/366 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + + L K++ +LF + G+ P ++TYN LI+ C + H +
Sbjct: 206 PDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTAL 265
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ S PN V F++++ LC E ++MEA + + G EPNV TYN L++G
Sbjct: 266 LNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCL 325
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
A+ +F+ M V + ++KA LF +M + + P+ VT
Sbjct: 326 RSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVT 385
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y++++ G C+ +A L EM+ +G P+ V++ +++D LCKN ++DEA LL +
Sbjct: 386 YSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIE 445
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ P+ +Y ++DG C G + A++LF ++ S G V++Y+I+ING C+ +
Sbjct: 446 GSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLA 505
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+GEM KG P+ YN + ++ R +L EM G +AD T +
Sbjct: 506 EASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLV 565
Query: 363 DGLCKN 368
+ L +
Sbjct: 566 EMLSDD 571
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A F +M + P + +T ++ ++ L +M G+ PN+ T N+
Sbjct: 49 LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C ++ A +L ++++G +PN +NTL+ G C+ G++ LF M G
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 168
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
V +Y LING CK A+ L M +PDVV+Y ++ L + QV +AF
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 228
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLC 366
LF EM G++ +TY + I LC
Sbjct: 229 NLFSEMIHQGISPSIFTYNSLIHALC 254
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 122/288 (42%), Gaps = 48/288 (16%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M+ R P V ++N L D + +F + G PD+ +Y+ LIN +
Sbjct: 300 VVDMMIK-RGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGY 358
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG----- 117
CK+ R+ + + R PN VT+++L+ GLC R+ +A ALF ++ G
Sbjct: 359 CKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDF 418
Query: 118 ------------------------------CEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
+P++ Y +I+G+ R G A +LF
Sbjct: 419 VSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSN 478
Query: 148 MASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
++S V +G + +A +LF +MK + +P+ TY + RGF N+
Sbjct: 479 LSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNE 538
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
LL EM+ +G +V T V+++ L +G ++L +Q
Sbjct: 539 TLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 586
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%)
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
N ++A M+ P++ F ++ + K L M G+ PN +
Sbjct: 47 NTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTL 106
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N L++ FC R+ A + + +G + +++ LI G C +I L L+ +M+
Sbjct: 107 NILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIG 166
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+G +P+VV Y TL L ++ A +L M++ D Y + ID LCK+ + +
Sbjct: 167 EGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQ 226
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A LF + I YN LI L
Sbjct: 227 AFNLFSEMIHQGISPSIFTYNSLIHAL 253
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 166/409 (40%), Positives = 232/409 (56%), Gaps = 13/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML+M P PP + F L + K KHY TVLSL +++S G+ P++YT NILIN FC
Sbjct: 47 FNRMLHMHP-PPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFC 105
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ R+ F VL +IL+ PN TF +LI+GLC E +I E LF K+ G +PNV
Sbjct: 106 HLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVV 165
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQM 171
TY TLINGL + G T A+ L M GN + V + V +A LF +M
Sbjct: 166 TYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEM 225
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+P + TY S+I C +W LL EM++ + PNVV F+ ++D LCK GK+
Sbjct: 226 IHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKV 285
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA ++D+MI+ GV PN YN LMDG CL ++ A ++F +M G V SYS L
Sbjct: 286 MEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTL 345
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
INGYCK + IE A+ L+ EM K + P+ V Y+TL L + +++ A LF EM G
Sbjct: 346 INGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQ 405
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D +Y +D LCKN + EA+ L + + + DI+ Y +IDG+
Sbjct: 406 IPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGM 454
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 183/366 (50%), Gaps = 12/366 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + + L K++ +LF + G+ P ++TYN LI+ C + H +
Sbjct: 197 PDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTAL 256
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ S PN V F++++ LC E ++MEA + + G EPNV TYN L++G
Sbjct: 257 LNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCL 316
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
A+ +F+ M V + ++KA LF +M + + P+ VT
Sbjct: 317 RSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVT 376
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y++++ G C+ +A L EM+ +G P+ V++ +++D LCKN ++DEA LL +
Sbjct: 377 YSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIE 436
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ P+ +Y ++DG C G + A++LF ++ S G V++Y+I+ING C+ +
Sbjct: 437 GSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLA 496
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+GEM KG P+ YN + ++ R +L EM G +AD T +
Sbjct: 497 EASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLV 556
Query: 363 DGLCKN 368
+ L +
Sbjct: 557 EMLSDD 562
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A F +M + P + +T ++ ++ L +M G+ PN+ T N+
Sbjct: 40 LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C ++ A +L ++++G +PN +NTL+ G C+ G++ LF M G
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 159
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
V +Y LING CK A+ L M +PDVV+Y ++ L + QV +AF
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 219
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLC 366
LF EM G++ +TY + I LC
Sbjct: 220 NLFSEMIHQGISPSIFTYNSLIHALC 245
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 122/288 (42%), Gaps = 48/288 (16%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M+ R P V ++N L D + +F + G PD+ +Y+ LIN +
Sbjct: 291 VVDMMIK-RGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGY 349
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG----- 117
CK+ R+ + + R PN VT+++L+ GLC R+ +A ALF ++ G
Sbjct: 350 CKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDF 409
Query: 118 ------------------------------CEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
+P++ Y +I+G+ R G A +LF
Sbjct: 410 VSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSN 469
Query: 148 MASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
++S V +G + +A +LF +MK + +P+ TY + RGF N+
Sbjct: 470 LSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNE 529
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
LL EM+ +G +V T V+++ L +G ++L +Q
Sbjct: 530 TLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 577
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%)
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
N ++A M+ P++ F ++ + K L M G+ PN +
Sbjct: 38 NTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTL 97
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N L++ FC R+ A + + +G + +++ LI G C +I L L+ +M+
Sbjct: 98 NILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIG 157
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+G +P+VV Y TL L ++ A +L M++ D Y + ID LCK+ + +
Sbjct: 158 EGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQ 217
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A LF + I YN LI L
Sbjct: 218 AFNLFSEMIHQGISPSIFTYNSLIHAL 244
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 166/412 (40%), Positives = 248/412 (60%), Gaps = 19/412 (4%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML MR +PP + FN + AK KHY T +SL RL G+ PDL T NILINCFC
Sbjct: 47 FNRMLCMRHTPP-IIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFC 105
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
MG+++ GF VL +IL+ + P+ +TFT+LIKGLC + ++ +A KL G + +
Sbjct: 106 HMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQV 165
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQM 171
+Y TLING+ + G T A+ L ++ + VE + V +A LF +M
Sbjct: 166 SYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEM 225
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+ DVVTYT++I GFC A+ EA LL EM+ + + PNV T+N+++D LCK GK+
Sbjct: 226 TAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKV 285
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA +L +M++ V+P+ Y+TLMDG+ L + +A+ +F +M MG T V SY+IL
Sbjct: 286 KEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTIL 345
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
ING+CKNK ++ AL+L+ EM K + P +V Y++L L + ++ + L DEM+ G+
Sbjct: 346 INGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGI 405
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLR---ILKCELDIRAYNCLIDGL 400
A+ TY + IDGLCKN ++ A+ LF ++ I C + L+DGL
Sbjct: 406 PANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSF---TFTILLDGL 454
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 163/297 (54%), Gaps = 23/297 (7%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
P++YTYNIL++ CK G+V VL +L++C P+ +T+++L+ G + +A +
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHV 326
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL 169
F + + G P+V +Y LING F VD+A LF
Sbjct: 327 FNAMSLMGVTPDVHSYTILING-----------------------FCKNKMVDEALNLFK 363
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M +N+ P +VTY+S+I G C + + L+ EM D+G+ NV+T+N ++D LCKNG
Sbjct: 364 EMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNG 423
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+D A L + M G+RP +F + L+DG C GR+ A+E F + + G V+ Y+
Sbjct: 424 HLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYN 483
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
++ING+CK +E AL++ +M G P+ V ++ + LF+ + ++A KL +M
Sbjct: 484 VMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQM 540
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 180/365 (49%), Gaps = 23/365 (6%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 95
+ L ++++ P++ YN +I+ CK VS + + + + + VT+T+LI
Sbjct: 183 AIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIY 242
Query: 96 GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEF 155
G C S++ EA L ++ + PNV+TYN L++ L +
Sbjct: 243 GFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCK--------------------- 281
Query: 156 GVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNV 215
EG V +AK + M + PDV+TY++++ G+ + +A+ + M GV P+V
Sbjct: 282 --EGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDV 339
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
++ ++++ CKN +DEA L M Q + P Y++L+DG C +GR++ +L
Sbjct: 340 HSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDE 399
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
M G V +Y+ LI+G CKN ++ A++L+ +M +GI+P + L L + +
Sbjct: 400 MRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGR 459
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
++ A + F ++ G D + Y I+G CK + EA+ + + C + ++
Sbjct: 460 LKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDI 519
Query: 396 LIDGL 400
+I+ L
Sbjct: 520 IINAL 524
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 122/240 (50%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
VD A F +M P ++ + ++ F ++ A L + +G+QP+++T N+
Sbjct: 40 VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNI 99
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C G++ +L +++ G +P+ + TL+ G CL G+VN+A + + G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 159
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
SY LING CK + GA+ L ++ + KP+V +YNT+ L + V A+
Sbjct: 160 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 219
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LF EM G++AD TY T I G C S + EA+ L + + ++ YN L+D L
Sbjct: 220 GLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 164/409 (40%), Positives = 244/409 (59%), Gaps = 13/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML MR +PP + FN + AK KHY T +SL RL G+ PDL T NILINCFC
Sbjct: 47 FNRMLCMRHTPP-IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFC 105
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
MG+++ GF VL +IL+ + P+ VT +LIKGLC + ++ +A KL G + N
Sbjct: 106 HMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQV 165
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQM 171
+Y TLING+ + G T A+ L ++ + VE + V +A LF +M
Sbjct: 166 SYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEM 225
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+ DVVTY+++I GFC EA LL EM+ + + PNV T+N+++D LCK GK+
Sbjct: 226 TVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKV 285
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA +L +M++ V+P+ Y+TLMDG+ L V +A+ +F +M MG T V +Y+IL
Sbjct: 286 KEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTIL 345
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
ING+CKNK ++ AL+L+ EM K + P +V Y++L L + ++ + L DEM+ G
Sbjct: 346 INGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQ 405
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
AD TY + IDGLCKN ++ A+ LF ++ + +I + L+DGL
Sbjct: 406 PADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGL 454
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 164/302 (54%), Gaps = 23/302 (7%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
P++YTYNIL++ CK G+V VL +L++C P+ +T+++L+ G + +A +
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHV 326
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL 169
F + + G P+V TY LING F VD+A LF
Sbjct: 327 FNAMSLMGVTPDVHTYTILING-----------------------FCKNKMVDEALNLFK 363
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M +N+ P +VTY+S+I G C + L+ EM D+G +V+T++ ++D LCKNG
Sbjct: 364 EMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNG 423
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+D A L + M +RPN F + L+DG C GR+ A+E+F + + G V++Y+
Sbjct: 424 HLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYN 483
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
++ING+CK +E AL++ +M G P+ + T+ + LF+ + ++A KL +M
Sbjct: 484 VMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIAR 543
Query: 350 GV 351
G+
Sbjct: 544 GL 545
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 182/384 (47%), Gaps = 12/384 (3%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP + N L L L +L + G + +Y LIN CK+G
Sbjct: 123 RGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRG 182
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+L +I PN ++++I LC + EA LF+++ V G +V TY+TLI
Sbjct: 183 AIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIY 242
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINP 178
G G A+ L EM V EG V +AK + M + P
Sbjct: 243 GFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKP 302
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
DV+TY++++ G+ + +A+ + M GV P+V T+ ++++ CKN +DEA L
Sbjct: 303 DVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLF 362
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
M Q + P Y++L+DG C +GR+ +L M G V +YS LI+G CKN
Sbjct: 363 KEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKN 422
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
++ A++L+ +M + I+P++ + L L + +++ A ++F ++ G + +TY
Sbjct: 423 GHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTY 482
Query: 359 RTFIDGLCKNSYIVEAVELFRTLR 382
I+G CK + EA+ + +
Sbjct: 483 NVMINGHCKQGLLEEALTMLSKME 506
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 120/240 (50%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
VD A F +M P ++ + ++ F ++ A L + +G+QP+++T N+
Sbjct: 40 VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C G++ +L +++ G P+ NTL+ G CL G+V +A + + G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
SY+ LING CK + GA+ L ++ + KP+V +Y+T+ L + V A+
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 219
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LF EM G++AD TY T I G C + EA+ L + + ++ YN L+D L
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 154/409 (37%), Positives = 239/409 (58%), Gaps = 12/409 (2%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F++ML+ +P P + +L + ++YD V+SL K++ GL P++YT +I +NCFC
Sbjct: 80 FNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFC 139
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
++ RV GF VL ++++ P VTFT+LI GLC +A LF + GC+P+V+
Sbjct: 140 QLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVY 199
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
TYNT+INGL + G T A L ++M + + + V++A ++F M
Sbjct: 200 TYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYM 259
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
K + I+PD+ TYTS+I+G C + W EA LL EM + P++VTFNV++D CK GK+
Sbjct: 260 KAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKV 319
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA +L M ++GV PN Y++LM G+ L V A++LF M + GC +FSY+IL
Sbjct: 320 SEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNIL 379
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
INGYCK K I+ A+ L+ EM+ +G+ P+ V YNTL ++ ++ A LF M +G
Sbjct: 380 INGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGN 439
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D +TY +DG CK Y+ +A LFR ++ + ++ Y L+ +
Sbjct: 440 LPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAM 488
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 134/398 (33%), Positives = 215/398 (54%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +F L L K + + LF + + G PD+YTYN +IN CK+G + +
Sbjct: 161 PTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGL 220
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ + PN VT+++LI LC + + EA +F+ ++ G P++FTY +LI GL +
Sbjct: 221 LKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCK 280
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
A L EM S N F EG V +A + M + + P+VVT
Sbjct: 281 FSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVT 340
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+S++ G+ D EA+ L M+ +G +PN+ ++N++++ CK ++DEA +L + MI
Sbjct: 341 YSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMI 400
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ PN YNTL+ GFC G++ A++LF +M + G +F+YSIL++G+CK +
Sbjct: 401 HQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLG 460
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ M S +KP++V+Y L + + + A KLF E+ G+ Y T I
Sbjct: 461 KAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTII 520
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+GLCK + EA+E FR + C D +YN +I GL
Sbjct: 521 NGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGL 558
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 162/409 (39%), Positives = 232/409 (56%), Gaps = 13/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML+M P PP F L +AK KHY TVLSL +++S G+ PD+YT NILIN FC
Sbjct: 100 FNRMLHMHP-PPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFC 158
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ R+ + F VL ++L+ P+ TF +LI+GLC E +I EA LF K G +P+V
Sbjct: 159 HLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVV 218
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQM 171
TY TL+NGL + G+T A+ L M N V + V +A LF +M
Sbjct: 219 TYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEM 278
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+PD+ TY S+I C +W LL EM++ + PNVV F+ ++D LCK G +
Sbjct: 279 ITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMI 338
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
A ++D+MI+ GV P+ Y LMDG CL ++ A ++F +M GC V SY+IL
Sbjct: 339 AIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNIL 398
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
INGYC+ + ++ A+ L +M +G+ D V YNTL L + +++ A LF EM G
Sbjct: 399 INGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQ 458
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D TYR +D LCKN ++ EA+ L + + + DI YN IDG+
Sbjct: 459 IPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGM 507
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 103/206 (50%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A F +M + P V +T ++ ++ L +M G+ P+V T N+
Sbjct: 93 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C ++ A +L ++++G +P+ +NTL+ G C+ G++ A LF G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
V +Y L+NG CK A+ L M+ K +P+V+ YNT+ L + QV AF
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLC 366
LF EM G++ D +TY + I LC
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALC 298
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 6/210 (2%)
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI---GVRPNA 250
N ++A M+ P+ V F ++ + KM S +L L Q+ G+ P+
Sbjct: 91 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSI---AKMKHYSTVLSLSTQMDSFGIPPDV 147
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
+ N L++ FC R+ A + + +GC +++ LI G C +I AL L+ +
Sbjct: 148 YTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDK 207
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
+ +G +PDVV Y TL L ++ A +L M + + Y T ID LCK+
Sbjct: 208 TIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQ 267
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ EA LF + DI YN LI L
Sbjct: 268 VTEAFNLFSEMITKGISPDIFTYNSLIHAL 297
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 162/409 (39%), Positives = 232/409 (56%), Gaps = 13/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML+M P PP F L +AK KHY TVLSL +++S G+ PD+YT NILIN FC
Sbjct: 138 FNRMLHMHP-PPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFC 196
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ R+ + F VL ++L+ P+ TF +LI+GLC E +I EA LF K G +P+V
Sbjct: 197 HLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVV 256
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQM 171
TY TL+NGL + G+T A+ L M N V + V +A LF +M
Sbjct: 257 TYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEM 316
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+PD+ TY S+I C +W LL EM++ + PNVV F+ ++D LCK G +
Sbjct: 317 ITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMI 376
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
A ++D+MI+ GV P+ Y LMDG CL ++ A ++F +M GC V SY+IL
Sbjct: 377 AIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNIL 436
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
INGYC+ + ++ A+ L +M +G+ D V YNTL L + +++ A LF EM G
Sbjct: 437 INGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQ 496
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D TYR +D LCKN ++ EA+ L + + + DI YN IDG+
Sbjct: 497 IPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGM 545
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 191/397 (48%), Gaps = 12/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FN L L L LF + G PD+ TY L+N CK+G S +
Sbjct: 218 PDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRL 277
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ PN + + ++I LC + ++ EA LF+++ G P++FTYN+LI+ L
Sbjct: 278 LRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCN 337
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
L EM + V EG + A ++ M + PDVVT
Sbjct: 338 LCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVT 397
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+++ G C ++ +EA + M+ +G PNV ++N++++ C+ +MD+A LL+ M
Sbjct: 398 YTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMS 457
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ + YNTL+ G C GR+ A LF M + G + +Y IL++ CKN +
Sbjct: 458 LQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLA 517
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ L + + D+++YN + ++E A LF + G+ D TY I
Sbjct: 518 EAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMI 577
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
GLCK + EA +LFR + C D YN +I G
Sbjct: 578 HGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRG 614
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 176/366 (48%), Gaps = 12/366 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + L K++ +LF + + G+ PD++TYN LI+ C + H +
Sbjct: 288 PNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTL 347
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ S PN V F++++ LC E I A + + G EP+V TY L++G
Sbjct: 348 LNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCL 407
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
A+ +F+ M V + +DKA L QM + + D VT
Sbjct: 408 RSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVT 467
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G C+ A L EM+ G P++VT+ +++D LCKN + EA LL +
Sbjct: 468 YNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIE 527
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ + VYN +DG C G + A++LF ++ S G V +Y+I+I+G CK ++
Sbjct: 528 GSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLD 587
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ +M G D IYNT+ ++ A +L EM +G +AD T +
Sbjct: 588 EANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIV 647
Query: 363 DGLCKN 368
+ L +
Sbjct: 648 EMLSDD 653
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 103/206 (50%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A F +M + P V +T ++ ++ L +M G+ P+V T N+
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C ++ A +L ++++G +P+ +NTL+ G C+ G++ A LF G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
V +Y L+NG CK A+ L M+ K +P+V+ YNT+ L + QV AF
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLC 366
LF EM G++ D +TY + I LC
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALC 336
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 119/247 (48%), Gaps = 13/247 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M++ + P V S+NIL + + D + L ++++ GL D TYN LI+
Sbjct: 417 VFDTMVH-KGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGL 475
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +GR+ H + ++ S P+ VT+ L+ LC + EA L + + ++
Sbjct: 476 CHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADI 535
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQ 170
YN I+G+ R G A +LF ++S + V G +D+A +LF +
Sbjct: 536 LVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRK 595
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + + D Y ++IRGF +N+ A LL EM+ +G +V T +I++ L +G
Sbjct: 596 MDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDGL 655
Query: 231 MDEASRL 237
RL
Sbjct: 656 DQSFERL 662
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 6/210 (2%)
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI---GVRPNA 250
N ++A M+ P+ V F ++ + KM S +L L Q+ G+ P+
Sbjct: 129 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSI---AKMKHYSTVLSLSTQMDSFGIPPDV 185
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
+ N L++ FC R+ A + + +GC +++ LI G C +I AL L+ +
Sbjct: 186 YTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDK 245
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
+ +G +PDVV Y TL L ++ A +L M + + Y T ID LCK+
Sbjct: 246 TIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQ 305
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ EA LF + DI YN LI L
Sbjct: 306 VTEAFNLFSEMITKGISPDIFTYNSLIHAL 335
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/409 (38%), Positives = 237/409 (57%), Gaps = 12/409 (2%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F++ML+ +P P + +L + ++YDTV+SL K++ GL P++YT +ILINCF
Sbjct: 85 FNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFS 144
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ RV F VL +I++ P VTFT+LI LC + +A LF + GC P+V+
Sbjct: 145 HLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVY 204
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQM 171
TY T+INGL + G T A L ++M + V + V++A ++F M
Sbjct: 205 TYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYM 264
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
K + I+PD+ TY S+I+G C + W EA LL EM + P++VTFNV++D +CK GK+
Sbjct: 265 KVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKV 324
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA +L M ++GV P+ Y++LM G+ L V A++LF +M + GC VFSY+IL
Sbjct: 325 SEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNIL 384
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
INGYCK K I+ A L+ EM+ +G+ P+ V YNTL L ++ + A LF M +G
Sbjct: 385 INGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGN 444
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +TY +DG CK Y +A LFR ++ + ++ YN LID +
Sbjct: 445 LPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAM 493
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 133/397 (33%), Positives = 213/397 (53%), Gaps = 12/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +F L L K + + LF + + G PD+YTY +IN CK+G + +
Sbjct: 166 PTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGL 225
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ + PN VT++++I + R+ EA +F+ ++V G P++FTYN+LI GL
Sbjct: 226 LKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCN 285
Query: 135 TGHTIVALNLFEEMASGN-----GEFGV-------EGFVDKAKELFLQMKDENINPDVVT 182
A L EM S N F V EG V +A+ + M + + PDVVT
Sbjct: 286 FSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVT 345
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+S++ G+ ++ EA+ L M+ +G +P+V ++N++++ CK ++DEA +L + MI
Sbjct: 346 YSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMI 405
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ PN YNTL+ G C G + A+ LF +M + G +F+YSIL++G+CK
Sbjct: 406 HQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFG 465
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ M S KP++V+YN L + + + A KLF E+ G+ + Y T I
Sbjct: 466 KAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTII 525
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+GLCK + EA+E FR + C D +YN +I G
Sbjct: 526 NGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRG 562
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 169/355 (47%), Gaps = 24/355 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF YM ++ P + ++N L L + +L + S + PD+ T+N+L++
Sbjct: 260 IFSYM-KVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTI 318
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G+VS VL + P+ VT++SL+ G S ++EA LF + GC+P+V
Sbjct: 319 CKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDV 378
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
F+YN LING + +D+AK+LF +M + + P+ V+
Sbjct: 379 FSYNILINGYCKVKR-----------------------IDEAKQLFNEMIHQGLTPNNVS 415
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G C EA+ L M G PN+ T+++++D CK G +A RL M
Sbjct: 416 YNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQ 475
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+PN +YN L+D C +G + A++LF + G Y+ +ING CK ++
Sbjct: 476 STYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLD 535
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
AL + M G PD + YN + RA +L EM+ G AD T
Sbjct: 536 EALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 154/409 (37%), Positives = 231/409 (56%), Gaps = 12/409 (2%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F++ML+ P P + +L + ++Y V+SL K++ GL PD+YT +ILI+CF
Sbjct: 82 FNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFS 141
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ RV F V ++++ P+AVTF +LI GLC + +A F GC+P V+
Sbjct: 142 HLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVY 201
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
TY T+INGL + G T A LF++M + V + V++A ++F M
Sbjct: 202 TYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYM 261
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
K + I+PD+ TY S+I+G C W EA LL EM + PN+ TFNV++D +CK GK+
Sbjct: 262 KAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKV 321
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA + M ++GV P+ Y++LM G+ L + A++LF +M + GC FSY+IL
Sbjct: 322 SEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNIL 381
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I GYCK K I+ A L+ EM+ +G+ PD V YNTL L ++ ++ A LF M +G
Sbjct: 382 IKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGN 441
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D +TY +DG CK Y+ +A LFR ++ + DI YN LID +
Sbjct: 442 LPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAM 490
Score = 228 bits (580), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 134/411 (32%), Positives = 215/411 (52%), Gaps = 13/411 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F M+ + P V +FN L L K + + F ++G P +YTY +IN
Sbjct: 150 FSVFSKMIKLGLQPDAV-TFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIIN 208
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK+G + + ++ + PN VT+ LI LC + + EA +F+ ++ P
Sbjct: 209 GLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISP 268
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGN-----GEFGV-------EGFVDKAKELF 168
++FTYN+LI GL A L EM S N F V EG V +A+ +F
Sbjct: 269 DIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVF 328
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
M + + PDVVTY+S++ G+ + EA+ L M+ +G +P+ ++N+++ CK
Sbjct: 329 KTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKA 388
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
++DEA +L + MI G+ P+ YNTL+ G C GR+ A++LF +M S G +F+Y
Sbjct: 389 KRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTY 448
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
S+L++G+CK + A L+ M S +KPD+ +YN L + + ++ A KLF E+
Sbjct: 449 SMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFV 508
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G+ + Y T I+ LCK + EA+E FR + C D +YN +I G
Sbjct: 509 QGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRG 559
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 191/384 (49%), Gaps = 20/384 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L K LFK++ G P++ TYNILI+ CK V+ +
Sbjct: 198 PTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDI 257
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ +P+ T+ SLI+GLC R EA+AL ++ PN+FT+N L++ + +
Sbjct: 258 FSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICK 317
Query: 135 TGHTIVALNLFEEMASGNGEFGVE-----------GF-----VDKAKELFLQMKDENINP 178
G A +F+ M E GVE G+ + +A++LF M + P
Sbjct: 318 EGKVSEAQGVFKTMT----EMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKP 373
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D +Y +I+G+C A +EAK L EM+ QG+ P+ V +N ++ LC+ G++ EA L
Sbjct: 374 DAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLF 433
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
M G P+ F Y+ L+DGFC G + +A LF M+S + Y+ILI+ CK
Sbjct: 434 KNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKF 493
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
++ A L+ E+ +G+ P+V IY T+ L + ++ A + F M+ DG D ++Y
Sbjct: 494 GNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSY 553
Query: 359 RTFIDGLCKNSYIVEAVELFRTLR 382
I G + A +L +R
Sbjct: 554 NVIIRGFLQYKDESRAAQLIGEMR 577
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 171/355 (48%), Gaps = 12/355 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++NIL L K+K + L +F + + + PD++TYN LI C R +
Sbjct: 233 PNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASAL 292
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + PN TF L+ +C E ++ EA +F + G EP+V TY++L+ G
Sbjct: 293 LNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSL 352
Query: 135 TGHTIVALNLFEEMASGNGEFG-------VEGF-----VDKAKELFLQMKDENINPDVVT 182
+ A LF+ M + + ++G+ +D+AK+LF +M + + PD V
Sbjct: 353 RMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVN 412
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G C EA+ L M G P++ T+++++D CK G + +A RL +M
Sbjct: 413 YNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQ 472
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
++P+ +YN L+D C G + A++LF + G V Y+ +IN CK ++
Sbjct: 473 STYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLD 532
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
AL + M G PD YN + + RA +L EM+ G A+ T
Sbjct: 533 EALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGT 587
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/410 (39%), Positives = 235/410 (57%), Gaps = 13/410 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ ML MRP PP + F+ L + + KHY TVLSL+K+++S G+ + YT NILIN F
Sbjct: 41 LFNRMLRMRP-PPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSF 99
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C + R+ F VLG IL+ + P+ TFT+LI+GLC E +I EA LF K+ G +P+V
Sbjct: 100 CHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDV 159
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQ 170
TY TLINGL + G+T A+ M N V + + +A LF
Sbjct: 160 LTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSD 219
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + I+P+ TY+S+I G C W EA L M+ + + P+ +TFN ++D LCK G
Sbjct: 220 MLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGM 279
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ +A ++D+MIQ ++P+ YN+LMDG CL + + +F +M GC +V SY+
Sbjct: 280 VVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTT 339
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LINGYCK + ++ A+ L+ EM +G+ PD V YNTL L + ++ A LF EM G
Sbjct: 340 LINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYG 399
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D TYR D LCKN + EA+ L + + + DI Y+ ++DG+
Sbjct: 400 QIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGM 449
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 187/397 (47%), Gaps = 12/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F L L L LF ++ G PD+ TY LIN CK+G S
Sbjct: 122 PSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRF 181
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + P V ++++I LC + ++ EA +LF+ + G PN FTY++LI+GL
Sbjct: 182 LRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCI 241
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
GH A+ LF M EG V KA + M ++ PDVVT
Sbjct: 242 LGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVT 301
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S++ G C ++ + + M+ +G P+V+++ +++ CK MD+A L + M
Sbjct: 302 YNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMS 361
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q G+ P+ YNTL+ G C GR+ A LF M G + +Y IL + CKN +
Sbjct: 362 QQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLA 421
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ L + + PD+ IY+ + + ++E A LF ++ G+ D TY I
Sbjct: 422 EAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMI 481
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+GLC+ + EA +LF + C + YN + G
Sbjct: 482 NGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRG 518
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 184/374 (49%), Gaps = 14/374 (3%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P V ++ + L K++ LSLF + + G+ P+ +TY+ LI+ C +G
Sbjct: 185 MEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGH 244
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ ++ P+ +TF +L+ LC E +++A + + +P+V TYN+
Sbjct: 245 WKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNS 304
Query: 128 LINGLYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDE 174
L++G +N+F+ M NG ++ +DKA LF +M +
Sbjct: 305 LMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQ-IMDKAMGLFEEMSQQ 363
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
+ PD VTY ++I G C+ +A L EM+ G P++VT+ ++ D LCKN ++ EA
Sbjct: 364 GLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEA 423
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
LL ++ + P+ +Y+ +MDG C G + A++LF + S G V +Y+I+ING
Sbjct: 424 MVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMING 483
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
C+ + A L+GEM G P+ YN + ++ RA +LF EM G + D
Sbjct: 484 LCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSID 543
Query: 355 TWTYRTFIDGLCKN 368
T ++ L +
Sbjct: 544 VSTTTLLVEMLSDD 557
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 144/297 (48%), Gaps = 23/297 (7%)
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVD 162
I +A +LF ++ P++ ++ L+ + R H L+L+++M S FG
Sbjct: 35 IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDS----FG------ 84
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
I + T +I FC+ N A +L +++ G QP+ TF ++
Sbjct: 85 -------------IPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLI 131
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
LC GK+ EA +L D M G +P+ Y TL++G C G + A SME C
Sbjct: 132 RGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCR 191
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
TV YS +I+ CK++++ ALSL+ +ML+KGI P+ Y++L L + + A +L
Sbjct: 192 PTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRL 251
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
F M + D T+ T +D LCK +V+A + + + D+ YN L+DG
Sbjct: 252 FYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDG 308
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 116/240 (48%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A LF +M P +V ++ ++ ++ L +M G+ N T N+
Sbjct: 35 IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C ++ A +L ++++G +P+ + TL+ G C+ G++ A +LF M G
Sbjct: 95 LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
V +Y LING CK A+ M + +P VV+Y+T+ L + Q+ A
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LF +M G++ + +TY + I GLC + EA+ LF + K D +N L+D L
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDAL 274
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 121/252 (48%), Gaps = 26/252 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+ + P V S+ L K + D + LF+ ++ GL PD TYN LI+
Sbjct: 321 VFDTMVR-KGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGL 379
Query: 63 CKMGRVS------HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF 116
C +GR+ H VV G+I P+ VT+ L LC R+ EA L +
Sbjct: 380 CHVGRLRDAIALFHEMVVYGQI------PDLVTYRILFDYLCKNHRLAEAMVLLKVIEGT 433
Query: 117 GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKA 164
+P++ Y+ +++G+ R G A +LF +++S V +G + +A
Sbjct: 434 NLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEA 493
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
+LF +M + +P+ TY + RGF N+ A L EM+ +G +V T ++++
Sbjct: 494 SKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEM 553
Query: 225 LCKNGKMDEASR 236
L +G +D++ +
Sbjct: 554 LSDDG-LDQSVK 564
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%)
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
N ++A L M+ P++V F+ ++ + + L M G+ N +
Sbjct: 33 NTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTL 92
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N L++ FC R+ A + + +G + +++ LI G C +I AL L+ +M
Sbjct: 93 NILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTG 152
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+G +PDV+ Y TL L ++ A + M++ Y T ID LCK+ + E
Sbjct: 153 EGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTE 212
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A+ LF + + Y+ LI GL
Sbjct: 213 ALSLFSDMLAKGISPNNFTYSSLIHGL 239
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 158/411 (38%), Positives = 241/411 (58%), Gaps = 15/411 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ +L +RP PP V FN L G L K KHY TV+SL K+++ + + P++YT ILINC C
Sbjct: 57 FNQLLGIRPLPP-VVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLC 115
Query: 64 KMGR--VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
R V F LG++ + P VTF +L+ GLC++++I++A LF ++ G P+
Sbjct: 116 HSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPS 175
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFL 169
+ TY T+I GL + GHT AL L ++M + V + ++A F
Sbjct: 176 LITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFS 235
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M D+ I P+VVTY+S++ GFC NEA L +M+ + V PN VTF +++D LCK G
Sbjct: 236 EMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEG 295
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+ EA R+ ++M + GV P+A+ Y+ LMDG+CL +++ A++LF M G +V Y+
Sbjct: 296 MILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYN 355
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
ILING+CK++ + A +L EM + + PD V Y+TL + + + A KLF EM
Sbjct: 356 ILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSY 415
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G+ D+ TY +DGLCK+ ++ EA L + ++ K E I YN LI G+
Sbjct: 416 GLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGM 466
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 189/361 (52%), Gaps = 12/361 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + L K++ + + F + G+ P++ TY+ +++ FC +G+++ +
Sbjct: 209 PDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSL 268
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ PN VTFT L+ GLC E I+EA +F + G EP+ +TY+ L++G
Sbjct: 269 FKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCL 328
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
A LF+ M V + +++AK L +M D ++ PD VT
Sbjct: 329 QSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVT 388
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+++++GFC A A+ L EM G+ P+ +T+++++D LCK+G +DEA RLL M
Sbjct: 389 YSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQ 448
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ + P+ +YN L+ G C G++ A+ELF ++ G +V +Y+++I+G K
Sbjct: 449 ESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSN 508
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A ++ +M+ G P+ YN A +L +EM G +AD+ T++ +
Sbjct: 509 EACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568
Query: 363 D 363
D
Sbjct: 569 D 569
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 163/409 (39%), Positives = 232/409 (56%), Gaps = 13/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML MRP PPP FN + L NKHY TV+SLFK+ G+ PDL T +ILINCFC
Sbjct: 45 FNLMLLMRP-PPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFC 103
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
++ F V IL+ F PNA+T +LIKGLC I +A +L G + +
Sbjct: 104 HQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQV 163
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
+Y TLINGL +TG T L ++ + + V + A +++ +M
Sbjct: 164 SYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEM 223
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+PDVVTYT++I GFC EA LL EM + + PNV TFN+++D L K GKM
Sbjct: 224 IVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKM 283
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA LL +M++ ++P+ F YN+L+DG+ L V AK +F SM G T V Y+ +
Sbjct: 284 KEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNM 343
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
ING CK K ++ A+SL+ EM K + PD+V YN+L L + H +ERA L M+ G+
Sbjct: 344 INGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGI 403
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D ++Y +DGLCK+ + +A E+F+ L L++ AY LI+ L
Sbjct: 404 QPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRL 452
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 168/337 (49%), Gaps = 23/337 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N + L KNK ++ + G+ PD+ TY LI+ FC MG + F +
Sbjct: 195 PDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSL 254
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + PN TF LI L E ++ EA L + +P+VFTYN+LI+G +
Sbjct: 255 LNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYF- 313
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
L +E V AK +F M + PDV YT++I G C
Sbjct: 314 ---------LVDE-------------VKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTK 351
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+EA L EM + + P++VT+N ++D LCKN ++ A L M + G++P+ + Y
Sbjct: 352 MVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYT 411
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DG C +GR+ AKE+F + + G V +Y++LIN CK + AL L +M K
Sbjct: 412 ILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDK 471
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
G PD V ++ + LFE + ++A K+ EM G+
Sbjct: 472 GCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 23/206 (11%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
Y + R P V + + L K K D +SLF+ + + PD+ TYN LI+ CK
Sbjct: 326 YSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKN 385
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
+ + R+ P+ ++T L+ GLC R+ +A +F +L G NV Y
Sbjct: 386 HHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAY 445
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
LIN L + GF D+A +L +M+D+ PD VT+
Sbjct: 446 TVLINRLCKA-----------------------GFFDEALDLKSKMEDKGCMPDAVTFDI 482
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGV 211
+IR ++ ++A+ +L EM+ +G+
Sbjct: 483 IIRALFEKDENDKAEKILREMIARGL 508
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 162/409 (39%), Positives = 241/409 (58%), Gaps = 13/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML MR +PP + FN + AK KHY T +SL RL G+ PDL T NILINCFC
Sbjct: 47 FNRMLCMRHTPP-IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFC 105
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
MG+++ GF VL +IL+ + P+ VT +LIKGLC + ++ +A KL G + N
Sbjct: 106 HMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQV 165
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQM 171
+Y TLING+ + G T A+ ++ + V + V +A LF +M
Sbjct: 166 SYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEM 225
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+ DVVTY ++I GFC EA LL EM+ + + PNV T+N+++D LCK GK+
Sbjct: 226 AVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKV 285
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA +L +M++ V+P+ Y+TLMDG+ L V +A+ +F +M MG T V +Y+IL
Sbjct: 286 KEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTIL 345
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
ING+CKNK ++ AL+L+ EM K + P +V Y++L L + ++ + L DEM+ G
Sbjct: 346 INGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQ 405
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
AD TY + IDGLCKN ++ A+ LF ++ + +I + L+DGL
Sbjct: 406 PADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGL 454
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 184/354 (51%), Gaps = 14/354 (3%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R + P V +N + + K + LF + G+ D+ TYN LI FC +G++
Sbjct: 193 RLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKE 252
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+L ++ PN T+ L+ LC E ++ EA ++ + +P+V TY+TL++
Sbjct: 253 AIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMD 312
Query: 131 GLYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENIN 177
G + A ++F M+ NG F VD+A LF +M +N+
Sbjct: 313 GYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILING-FCKNKMVDEALNLFKEMHQKNMV 371
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P +VTY+S+I G C + + L+ EM D+G +V+T++ ++D LCKNG +D A L
Sbjct: 372 PGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIAL 431
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
+ M +RPN F + L+DG C GR+ A+E+F + + G V++Y+++ING+CK
Sbjct: 432 FNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCK 491
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
+E AL++ +M G P+ + T+ + LF+ + ++A KL +M G+
Sbjct: 492 QGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 182/384 (47%), Gaps = 12/384 (3%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP + N L L L +L + G + +Y LIN CK+G
Sbjct: 123 RGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRA 182
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
L +I P+ V + ++I +C + EA LF+++ V G +V TYNTLI
Sbjct: 183 AIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIY 242
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINP 178
G G A+ L EM V EG V +AK + M + P
Sbjct: 243 GFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKP 302
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
DV+TY++++ G+ + +A+ + M GV P+V T+ ++++ CKN +DEA L
Sbjct: 303 DVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLF 362
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
M Q + P Y++L+DG C +GR++ +L M G V +YS LI+G CKN
Sbjct: 363 KEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKN 422
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
++ A++L+ +M + I+P++ + L L + +++ A ++F ++ G + +TY
Sbjct: 423 GHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTY 482
Query: 359 RTFIDGLCKNSYIVEAVELFRTLR 382
I+G CK + EA+ + +
Sbjct: 483 NVMINGHCKQGLLEEALTMLSKME 506
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 119/240 (49%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
VD A F +M P ++ + ++ F ++ A L + +G+QP+++T N+
Sbjct: 40 VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C G++ +L +++ G P+ NTL+ G CL G+V +A + + G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
SY+ LING CK + A+ ++ + KPDVV+YNT+ + + V A+
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAY 219
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LF EM G++AD TY T I G C + EA+ L + + ++ YN L+D L
Sbjct: 220 GLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 159/410 (38%), Positives = 238/410 (58%), Gaps = 14/410 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHY-DTVLSLFKRLNSTGLFPDLYTYNILINCF 62
F++ML+ +P P + FN L + K +HY D V+SL K++ GL PD YT ++LINCF
Sbjct: 109 FNHMLHRKPRPC-IIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCF 167
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
++ RV GF VL +I++ VTF +LI GLC + +A LF + G +P+V
Sbjct: 168 FQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDV 227
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQ 170
TY T+INGL + G T+ A LF +M + V + V++A ++F
Sbjct: 228 HTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSY 287
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
MK + I+P++ TY S+I+G C + W EA +L EMM + PN+VTF+++++ CK G
Sbjct: 288 MKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGN 347
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ EA +L M ++GV PN Y++LM+G+ L V A++LF M + GC VFSY+I
Sbjct: 348 VFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNI 407
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LINGYCK K I A L+ EM+ +G+ PD+V YNTL L ++ ++ A LF M +G
Sbjct: 408 LINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNG 467
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D TY +DG CK Y+ +A LFR ++ + ++ YN LID +
Sbjct: 468 NLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 517
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 127/395 (32%), Positives = 213/395 (53%), Gaps = 12/395 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ +FN L L K + + LF + + G PD++TY +IN CK+G +
Sbjct: 192 IVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFR 251
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ + P+ VT++++I LC + R+ EA +F+ ++ G PN+FTYN+LI GL
Sbjct: 252 KMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFS 311
Query: 137 HTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
A + EM S N F EG V +A+ + M + + P+VVTY+
Sbjct: 312 RWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYS 371
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
S++ G+ + EA+ L M+ +G +P+V ++N++++ CK ++ EA +L + MI
Sbjct: 372 SLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQ 431
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G+ P+ YNTL+DG C GR+ A +LF +M + G + +YSIL++G+CK + A
Sbjct: 432 GLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKA 491
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L+ M S +KP++V+YN L + + ++ A KLF E+ G+ + Y T I+G
Sbjct: 492 FRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIING 551
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
LCK + EA+E FR + C + +YN +I G
Sbjct: 552 LCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRG 586
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 190/368 (51%), Gaps = 23/368 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ + L K++ + L +F + + G+ P+++TYN LI C R +
Sbjct: 260 PDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAM 319
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ PN VTF+ LI C E + EA + + G EPNV TY++L+NG
Sbjct: 320 LNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNG--- 376
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ ++ V +A++LF M + PDV +Y +I G+C A
Sbjct: 377 --------------------YSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAK 416
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EAK L EM+ QG+ P++V++N ++D LC+ G++ EA L M+ G P+ Y+
Sbjct: 417 RIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYS 476
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DGFC G + +A LF +M+S + Y+ILI+ CK++ ++ A L+ E+ +
Sbjct: 477 ILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQ 536
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G++P+V IY T+ L + ++ A + F M+ DG + ++Y I G ++ A
Sbjct: 537 GLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRA 596
Query: 375 VELFRTLR 382
V+L +R
Sbjct: 597 VQLIGEMR 604
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 156/397 (39%), Positives = 225/397 (56%), Gaps = 24/397 (6%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML+ +P PP FN L +AK KH+ T+LSL ++++S G+ PD+YT I+IN C
Sbjct: 33 FNRMLHKQP-PPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLC 91
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ RV F L +IL+ P+A TFT+LI+GLC E +I EA LF K+ G +PNV
Sbjct: 92 HLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVV 151
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
TY TLINGL + A N+F EM + + I+P++VTY
Sbjct: 152 TYGTLINGLCKDRQVTEAFNIFSEMIT-----------------------KGISPNIVTY 188
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
S+I G C +W L+ EM+D + P+V T N ++D LCK G + EA ++D+MI
Sbjct: 189 NSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIH 248
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
GV PN YN LMDG CL V+ A ++F +M C V SY+ LINGYCK + ++
Sbjct: 249 RGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDK 308
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A+ L+ EM + + P+ V YNTL L + +++ A LF EM G D TYRT D
Sbjct: 309 AMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSD 368
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LCKN ++ +A+ L + + + DI+ Y ++DG+
Sbjct: 369 YLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGM 405
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 133/397 (33%), Positives = 204/397 (51%), Gaps = 37/397 (9%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML+M P PP F L +AK KHY TVLSL +++S G+ PD+YT NILIN FC
Sbjct: 569 FNRMLHMHP-PPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFC 627
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ R+ + F VL ++L+ F P+ VT+ +L+ GLC K+ G P++F
Sbjct: 628 HLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLC-------------KMITKGISPDIF 674
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
TYN+LI+ L NL E L +M + I P+VV +
Sbjct: 675 TYNSLIHAL---------CNLCEW--------------KHVTTLLNEMVNSKIMPNVVVF 711
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
++V+ C A ++ M+ +GV+P+VVT+ +MD C +MDEA ++ D M+
Sbjct: 712 STVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVH 771
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G PN YN L++G+C R+++A L M G +Y+ LI+G C ++
Sbjct: 772 KGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQH 831
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A++L+ EM++ G PD+V Y L L + H + A L ++ + AD Y ID
Sbjct: 832 AIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAID 891
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G+C+ + A +LF L + D+R YN +I GL
Sbjct: 892 GMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGL 928
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 186/375 (49%), Gaps = 15/375 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L L K++ ++F + + G+ P++ TYN LI+ CK+ H +
Sbjct: 148 PNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTL 207
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ ++ S P+ T +++ LC E + EA + + G EPNV TYN L++G
Sbjct: 208 MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL 267
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
VA+ +F+ M NG ++ VDKA LF +M + + P+ V
Sbjct: 268 RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQS-VDKAMYLFEEMSRQELTPNTV 326
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY ++I G C+ +A L EM+ +G P++VT+ + D LCKN +D+A LL +
Sbjct: 327 TYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAI 386
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
P+ +Y T++DG C G + A++LF ++ S G V++Y+I+I+G CK +
Sbjct: 387 EGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLL 446
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A L+ EM G P+ YN + ++ R +L +EM G + D T T
Sbjct: 447 AEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVST-TTL 505
Query: 362 IDGLCKNSYIVEAVE 376
+ G+ + + ++V+
Sbjct: 506 LVGMLSDDGLDQSVK 520
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/477 (22%), Positives = 192/477 (40%), Gaps = 81/477 (16%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M++ + V S+N L K + D + LF+ ++ L P+ TYN LI+
Sbjct: 277 VFDTMVH-KDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGL 335
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +GR+ + ++ P+ VT+ +L LC + +A AL + +P++
Sbjct: 336 CHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDI 395
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
Y T+++G+ R G A +LF ++S + V +G + +A +LF +
Sbjct: 396 QIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSE 455
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG- 229
M +P+ TY + RGF N+ LL EM+ +G +V T +++ L +G
Sbjct: 456 MNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGL 515
Query: 230 ---------------------------------------------KMDEASRLLDLMIQI 244
+D+A + M+ +
Sbjct: 516 DQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHM 575
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
P+ + L+ + L M+S G V++ +ILIN +C + + A
Sbjct: 576 HPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYA 635
Query: 305 LSL---------------YG-------EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
S+ YG +M++KGI PD+ YN+L L + + + L
Sbjct: 636 FSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTL 695
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+EM + + + T +D LCK I A ++ + E D+ Y L+DG
Sbjct: 696 LNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDG 752
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 124/239 (51%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D+A F +M + P V + ++ + L +M G+ P+V T +
Sbjct: 26 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ LC ++D A L ++++G +P+A + TL+ G C+ G++ A LF M G
Sbjct: 86 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
V +Y LING CK++++ A +++ EM++KGI P++V YN+L L ++ + +
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
L +EM + D +T T +D LCK + EA ++ + E ++ YN L+DG
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDG 264
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%)
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
N +EA M+ + P+ V FN ++ + K L M G+ P+ +
Sbjct: 24 NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 83
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
+++ C RV+ A + +G +++ LI G C +I AL L+ +M+
Sbjct: 84 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 143
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+G +P+VV Y TL L + QV AF +F EM G++ + TY + I GLCK
Sbjct: 144 EGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKH 203
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
L + K D+ N ++D L
Sbjct: 204 VTTLMNEMVDSKIMPDVFTLNTVVDAL 230
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 154/409 (37%), Positives = 233/409 (56%), Gaps = 13/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F M+ M P P V F G +AK K Y + +SL +++ G+ ++Y+ N+LINC C
Sbjct: 84 FYRMVRMNPRPS-VVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLC 142
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
++ V V+G++ + P+A+TF +LI GLC E +I EA LF ++ G EPNV
Sbjct: 143 RLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVI 202
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
+YNT+INGL + G+TI+A+ +F +M G+ V + V++A E +M
Sbjct: 203 SYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEM 262
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
D I PDVVTY +++ GFC NEA L EM+ + V P+ VTFN+++D LCK G +
Sbjct: 263 VDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMV 322
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA + + M + G PNA+ YN LMDG+CL +++ A ++ M GC + SY+IL
Sbjct: 323 SEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNIL 382
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
INGYCK+K + A L EM K + PD V Y+TL L ++ + A LF EM G+
Sbjct: 383 INGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGL 442
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D Y +DG CK+ ++ EA++L + + + + +I Y LI G+
Sbjct: 443 LPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGM 491
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 186/384 (48%), Gaps = 23/384 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + L K++ + + + G+ PD+ TYN +++ FC +G+++ +
Sbjct: 234 PNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRL 293
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ P+ VTF L+ GLC E + EA + + G EPN +TYN L++G
Sbjct: 294 FKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDG--- 350
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ + +D+A ++ M + P++ +Y +I G+C +
Sbjct: 351 --------------------YCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSK 390
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
NEAK LL EM ++ + P+ VT++ +M LC+ G+ EA L M G+ P+ Y+
Sbjct: 391 RMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYS 450
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DGFC G ++ A +L M + Y+ILI G ++E A L+ ++ +
Sbjct: 451 ILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSAD 510
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
GI+PD+ YN + L + + A++ F +M+ DG D+ +Y I G +N A
Sbjct: 511 GIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTA 570
Query: 375 VELFRTLRILKCELDIRAYNCLID 398
++L + + D + L+D
Sbjct: 571 IQLIDEMVGKRFSADSSTFQMLLD 594
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 118/240 (49%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A F +M N P VV + + ++ A L +M GV NV + NV
Sbjct: 77 IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ LC+ +D A ++ M ++G++P+A +NTL++G C G++ A LF M G
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
V SY+ +ING CKN A+ ++ +M KP+VV YNT+ L + V A
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ EM G+ D TY T + G C + EA LF+ + D +N L+DGL
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/118 (20%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
++ R P + + IL + + LF +L++ G+ PD++TYN++I K G
Sbjct: 472 MHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGL 531
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGCEPNVF 123
+ ++ F P++ ++ +I+G A L ++ + F + + F
Sbjct: 532 SDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTF 589
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 153/398 (38%), Positives = 233/398 (58%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
PP+ FN + G L K KHY T +SLFK++ G+ PDL+T NILINCFC +G+++ F V
Sbjct: 8 PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
LG+IL+ + PN +T +L+KGLC + + ++ K+ G + + +Y TL+NGL +
Sbjct: 68 LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G T AL L + + V + V++A +L+ +M I P+V+T
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+++I GFC A EA LL EM+ + + PNV T+ ++MD LCK GK+ EA LL +M
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ GV+PN YNTLMDG+CL G V AK++F +M G V+SY+I+I+ CK+K ++
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A++L E+L K + P+ V Y++L ++ ++ A L EM G AD TY + +
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLL 367
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D LCKN + +A LF ++ + + Y LIDGL
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGL 405
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/367 (32%), Positives = 190/367 (51%), Gaps = 16/367 (4%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ R + P V +N + L K+K + L+ +++ G+FP++ TY+ LI FC G
Sbjct: 140 MIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAG 199
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
++ F +L ++ PN T+T L+ LC E ++ EA L + G +PNV +YN
Sbjct: 200 QLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYN 259
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDE 174
TL++G G A +F M V + VD+A L ++ +
Sbjct: 260 TLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHK 319
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
N+ P+ VTY+S+I GFC A LL EM +G +VVT+ ++D LCKN +D+A
Sbjct: 320 NMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKA 379
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+ L M + G++PN + Y L+DG C GR A++LF + GC V++Y+++I+G
Sbjct: 380 TALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISG 439
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
CK ++ AL++ +M G PD V + + LFE Q ++A KL EM +A D
Sbjct: 440 LCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEM----IAKD 495
Query: 355 TWTYRTF 361
+R F
Sbjct: 496 LLRFRDF 502
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%)
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M+ + P +N ++ A LF M+ G +F+ +ILIN +C +
Sbjct: 1 MLLVRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQ 60
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ + ++ G++L G +P+ + NTL L +V+++ D++ G D +Y T
Sbjct: 61 MTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYAT 120
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++GLCK A++L R + ++ YN +IDGL
Sbjct: 121 LLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGL 160
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 161/409 (39%), Positives = 241/409 (58%), Gaps = 13/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML MR +PP + FN + AK KHY T +SL RL G+ PDL T NILINCFC
Sbjct: 47 FNRMLCMRHTPP-IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFC 105
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
MG+++ GF VL +IL+ + P+ VT +LIKGLC + ++ +A KL G + N
Sbjct: 106 HMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQV 165
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQM 171
+Y TLING+ + G T A+ L +++ + V + V +A LF +M
Sbjct: 166 SYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEM 225
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+ DVVTY+++I GFC EA LL EM+ + + PNV T+N+++D LCK GK+
Sbjct: 226 TVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKV 285
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA +L +M++ V+P+ Y+TLMDG+ L V +A+ +F +M MG T V +Y+IL
Sbjct: 286 KEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTIL 345
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
ING+CKNK ++ AL+L+ EM K + P +V Y++L L + ++ + L DEM G
Sbjct: 346 INGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQ 405
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
A+ TY + IDGLCKN ++ A+ LF ++ + + L+DGL
Sbjct: 406 PANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGL 454
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 155/283 (54%), Gaps = 23/283 (8%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
P++YTYNIL++ CK G+V VL +L++C P+ +T+++L+ G + +A +
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHV 326
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL 169
F + + G P+V TY LING F VD+A LF
Sbjct: 327 FNAMSLMGVTPDVHTYTILING-----------------------FCKNKMVDEALNLFK 363
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M +N+ P +VTY+S+I G C + L+ EM D+G NV+T++ ++D LCKNG
Sbjct: 364 EMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNG 423
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+D A L + M G+RPN F + L+DG C GR+ A+E+F + + G V++Y+
Sbjct: 424 HLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYN 483
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
++I+G+CK +E AL++ +M G PD V + + + LF+
Sbjct: 484 VMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFK 526
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 189/402 (47%), Gaps = 12/402 (2%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP + N L L L +L + G + +Y LIN CK+G
Sbjct: 123 RGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRA 182
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+L +I PN V ++++I LC + EA LF+++ V G +V TY+TLI
Sbjct: 183 AIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIY 242
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINP 178
G G A+ L EM V EG V +AK + M + P
Sbjct: 243 GFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKP 302
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
DV+TY++++ G+ + +A+ + M GV P+V T+ ++++ CKN +DEA L
Sbjct: 303 DVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLF 362
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
M Q + P Y++L+DG C +GR+ +L M G V +YS LI+G CKN
Sbjct: 363 KEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKN 422
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
++ A++L+ +M +GI+P+ + L L + +++ A ++F ++ G + +TY
Sbjct: 423 GHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTY 482
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
IDG CK + EA+ + + C D + +I L
Sbjct: 483 NVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIAL 524
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 144/264 (54%), Gaps = 14/264 (5%)
Query: 31 KHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTF 90
KHY T +SL RL G+ PDL+T NILINCFC MG+++ F +L +IL+ + P+ +TF
Sbjct: 940 KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999
Query: 91 TSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS 150
T+LI GLC + ++ +A KL G + N +Y TLING+ + G T A+ L ++
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDG 1059
Query: 151 GNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+ V V KA LF +M + I+ DVVTY ++I GFC E
Sbjct: 1060 RLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKE 1119
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK--MDEASRLLDLMIQIGVRPNAFVYNTL 256
A LL +M+ + + PNV T+N+++D LCK GK +DE+ +L M G + NA + +
Sbjct: 1120 AIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEII 1179
Query: 257 MDGFCLTGRVNRAKELFVSMESMG 280
+ ++ ++L M + G
Sbjct: 1180 ISALFEKDENDKVEKLLHEMIARG 1203
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 119/240 (49%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
VD A F +M P ++ + ++ F ++ A L + +G+QP+++T N+
Sbjct: 40 VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C G++ +L +++ G P+ NTL+ G CL G+V +A + + G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
SY LING CK + A+ L ++ + KP+VV+Y+T+ L + V A+
Sbjct: 160 FQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAY 219
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LF EM G++AD TY T I G C + EA+ L + + ++ YN L+D L
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%)
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
+G+QP++ T N++++ C G++ +L +++ G P+ + TL++G CL G+VN+
Sbjct: 955 KGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
A + + G SY LING CK + A+ L ++ + KPDVV+YNT+
Sbjct: 1015 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIID 1074
Query: 329 VLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
L + V +A+ LF EM G++AD TY T I G C + EA+ L + +
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINP 1134
Query: 389 DIRAYNCLIDGL 400
++R YN L+D L
Sbjct: 1135 NVRTYNILVDAL 1146
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 115/239 (48%), Gaps = 2/239 (0%)
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
A L +++ + I PD+ T +I FC+ +L +++ +G P+ +TF +++
Sbjct: 945 AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
LC G++++A D ++ G + N Y TL++G C G A +L ++
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
V Y+ +I+ CK++ + A L+ EM KGI DVV YNTL + +++ A L
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124
Query: 344 DEMQRDGVAADTWTYRTFIDGLCK--NSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++M + + TY +D LCK + E++ + + C+ + + +I L
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISAL 1183
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%)
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
K A+SL + KGI+PD+ N L + Q+ F + ++ + G DT T+
Sbjct: 940 KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
T I+GLC + +A+ L +L+ +Y LI+G+
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGV 1041
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 156/409 (38%), Positives = 238/409 (58%), Gaps = 13/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ +LN+ P+PP + F + G L K Y T +SL + + G+ DL T+NILINCF
Sbjct: 44 FNRILNINPTPP-IFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFS 102
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
++G F V IL+ + PNA+T T+LIKGLC + +I +A K+ G N
Sbjct: 103 QLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKV 162
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQM 171
Y TLINGL + G T AL L + + V + V++A +L+ +M
Sbjct: 163 CYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 222
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+PDVVTY+++I GFC N+A L +M+ + + P+V TF++++D CK G++
Sbjct: 223 VSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRV 282
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA +L +M++ G++P+ Y +LMDG+CL +VN+AK +F +M G T V SY+I+
Sbjct: 283 KEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIM 342
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
ING+CK K+++ A++L+ EM K I PDVV YN+L L + ++ A KL DEM GV
Sbjct: 343 INGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGV 402
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D TY + +D LCKN + +A+ L ++ + D+ Y LIDGL
Sbjct: 403 PHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGL 451
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 113/349 (32%), Positives = 185/349 (53%), Gaps = 12/349 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N + + K K + L+ + S G+ PD+ TY+ LI+ FC +G+++ +
Sbjct: 194 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGL 253
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ P+ TF+ L+ G C E R+ EA + + G +P+V TY +L++G
Sbjct: 254 FNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCL 313
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
A ++F MA G V+ + VD+A LF +M +NI PDVVT
Sbjct: 314 VKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVT 373
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S+I G C + + A L+ EM D+GV + +T+N I+D LCKN ++D+A LL M
Sbjct: 374 YNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMK 433
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G++P+ + Y L+DG C GR+ A+ +F + G TV++Y+++I G+C N +
Sbjct: 434 DEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFD 493
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
AL+L +M G P+ Y + + LFE + + A KL EM G+
Sbjct: 494 KALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGL 542
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 197/410 (48%), Gaps = 15/410 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFG-CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILI 59
F +F +L P + ++ G CL H L ++ + G + Y LI
Sbjct: 111 FSVFANILKKGYEPNAITLTTLIKGLCLKGQIH--QALHFHDKVVALGFHLNKVCYGTLI 168
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 119
N CK+G+ S +L R+ PN V + ++I +C + EA L++++ G
Sbjct: 169 NGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGIS 228
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKEL 167
P+V TY+ LI+G G A+ LF +M S F EG V +AK +
Sbjct: 229 PDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNV 288
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
M + I PDVVTY S++ G+C N+AK + M GV NV ++N++++ CK
Sbjct: 289 LAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCK 348
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
K+DEA L M + P+ YN+L+DG C +G+++ A +L M G H +
Sbjct: 349 IKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKIT 408
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y+ +++ CKN +++ A++L +M +GI+PD+ Y L L + +++ A +F+++
Sbjct: 409 YNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLL 468
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
G +TY I G C N +A+ L + C + + Y +I
Sbjct: 469 VKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIII 518
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P ++N + L KN D ++L ++ G+ PD+YTY ILI+ CK GR+
Sbjct: 400 RGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKD 459
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ +L + T+T +I+G C +A AL +K+ GC PN TY +I
Sbjct: 460 AQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIIL 519
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFG 156
L+ +A L EM + FG
Sbjct: 520 SLFEKDENDMAEKLLREMIARGLLFG 545
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 157/414 (37%), Positives = 236/414 (57%), Gaps = 22/414 (5%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAK-NKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
F++ML+ +P P + FN L + + ++YD V+SL K++ GL P+ T NILINCF
Sbjct: 78 FNHMLHRKPLPC-IIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCF 136
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C M V GF VL ++++ P +TFT+LI GLC +A LF + GC+P+V
Sbjct: 137 CLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDV 196
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEG----------------FVDKAKE 166
+TY T+INGL + G T A L ++M GE G + V++A +
Sbjct: 197 YTYTTIINGLCKMGETAAAAGLIKKM----GEVGCQPDVVTYSTLIDSLCKDRLVNEALD 252
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
+F MK + I+P VV+YTS+I+G C + W EA +L EM + P++VTF++++D C
Sbjct: 253 IFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFC 312
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
K G + EA +L M ++GV PN YN+LM G+ L V A++LF M + GC VF
Sbjct: 313 KEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVF 372
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
SYSILINGYC K I+ A L+ EM+ +G+ P+ V Y TL ++ ++ A +LF +M
Sbjct: 373 SYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDM 432
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+G D TY ++G CK Y+ +A LFR ++ + ++ Y LID +
Sbjct: 433 HTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSM 486
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 197/396 (49%), Gaps = 21/396 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+ R P V ++ + L K L K++ G PD+ TY+ LI+
Sbjct: 183 LFDDMV-ARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSL 241
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK V+ + + +P V++TSLI+GLC+ SR EA+A+ ++ P++
Sbjct: 242 CKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDI 301
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE-----------GF-----VDKAKE 166
T++ LI+ + G+ + A + + M E GVE G+ V +A++
Sbjct: 302 VTFSLLIDIFCKEGNVLEAQGVLKTMT----EMGVEPNVITYNSLMHGYSLQMEVVEARK 357
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
LF M PDV +Y+ +I G+C +EAK L EM+ QG+ PN V++ ++ C
Sbjct: 358 LFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFC 417
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
+ GK+ EA L M G P+ Y+ L++GFC G + +A LF +M+ +
Sbjct: 418 QLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLV 477
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
Y+ILI+ CK+ + A L+ E+ G++PDV IY T+ L + ++ A + F +M
Sbjct: 478 MYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKM 537
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
+ DG + ++Y I G ++ AV+L +R
Sbjct: 538 EEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMR 573
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 172/355 (48%), Gaps = 12/355 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ L L K++ + L +F + + G+ P + +Y LI C R +
Sbjct: 229 PDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAM 288
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P+ VTF+ LI C E ++EA + + G EPNV TYN+L++G
Sbjct: 289 LNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSL 348
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
+ A LF+ M + + V + +D+AK+LF +M + + P+ V+
Sbjct: 349 QMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVS 408
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT++I FC EA+ L +M G P++ T++V+++ CK G + +A RL M
Sbjct: 409 YTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQ 468
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
++PN +Y L+D C +G +N A++LF + G V Y+ +ING CK ++
Sbjct: 469 GTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLD 528
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
AL + +M G P+ YN + + RA +L EM+ G AD T
Sbjct: 529 EALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGT 583
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 150/398 (37%), Positives = 233/398 (58%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
PP+ F + G L K KHY TV+SL K++ + G+ PDL T +ILINCFC +G+++ F V
Sbjct: 8 PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
LG+IL+ + PN + +L+KGLC + + ++ K+ G + + +Y L+NGL +
Sbjct: 68 LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G T A+ L + + V + VD+A +L+ +M I PDV+T
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT++I GFC A EA LL EM+ + + PN+ T+N ++D LCK GK+ E+ LL +M
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMT 247
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ GV+P+ +Y+ LMDG+CL G V +AK++F+ M G V+SY+I+ING CK K ++
Sbjct: 248 KKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVD 307
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A++L EML K + PD V Y++L L ++ ++ L EM G A+ TY + +
Sbjct: 308 EAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLL 367
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
DGLCKN + +A+ LF ++ + + Y LIDGL
Sbjct: 368 DGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGL 405
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 178/363 (49%), Gaps = 16/363 (4%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R + P V ++ + L K+K D L+ +N+ G+FPD+ TY LI FC G++
Sbjct: 144 RSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLME 203
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
F +L ++ PN T+ +LI LC E ++ E+ L + G +P+V Y+ L++
Sbjct: 204 AFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMD 263
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINP 178
G G A +F M V + VD+A L +M +N+ P
Sbjct: 264 GYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIP 323
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D VTY+S+I G C L EM +G N+VT+N ++D LCKN +D+A L
Sbjct: 324 DTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALF 383
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
M + G++PN + Y L+DG C GR+ + + LF + G V++Y+++I+G CK
Sbjct: 384 MKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKE 443
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+ AL++ +M G P+ V + + L E + ++A KL EM +A +
Sbjct: 444 GMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEM----IAKGLLPF 499
Query: 359 RTF 361
R F
Sbjct: 500 RNF 502
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 165/428 (38%), Positives = 235/428 (54%), Gaps = 32/428 (7%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML M+P PP FN L +AK KH+ T+LSL +++S G+ P++YT +ILIN FC
Sbjct: 49 FNRMLRMQP-PPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFC 107
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ RV F VL +IL+ P+ TFT+LI+G+C E +I EA LF K+ G P+V
Sbjct: 108 HLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVV 167
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQM 171
TY TLINGL + G+T A+ L M N + V + V +A LF +M
Sbjct: 168 TYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEM 227
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+PD+ TY S+I C +W LL EM+D + P+VV+FN ++D LCK GK+
Sbjct: 228 VTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKV 287
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA ++D MIQ GV PN Y LMDG CL ++ A ++F +M GC V SY+ L
Sbjct: 288 TEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTL 347
Query: 292 INGYCKNKEIEGAL-------------------SLYGEMLSKGIKPDVVIYNTLFVVLFE 332
INGYCK + I+ A+ ++ M+ KG P+V+ YNTL +
Sbjct: 348 INGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCK 407
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
I ++++A LF EM R + DT TY T I GLC + +A+ LF + ++
Sbjct: 408 IQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVT 467
Query: 393 YNCLIDGL 400
Y L+D L
Sbjct: 468 YRILLDYL 475
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 193/397 (48%), Gaps = 33/397 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N L L + V +L + + + PD+ ++N +++ CK G+V+ V
Sbjct: 234 PDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDV 293
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING--- 131
+ ++++ PN VT+T+L+ G C S + EA +F + GC PNV +YNTLING
Sbjct: 294 VDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCK 353
Query: 132 LYRTGHTI----------------VALNLFEEMASG-------------NGEFGVEGFVD 162
+ R I A+ +F+ M NG ++ +D
Sbjct: 354 IQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQR-ID 412
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
KA LF +M + + PD VTY+++I G C+ +A L EM+ PN+VT+ +++
Sbjct: 413 KAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILL 472
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
D LCKN + EA LL + + P+ V N +DG C G + A++LF ++ S G
Sbjct: 473 DYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQ 532
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
V++YSI+ING C+ ++ A L+ EM G + IYNT+ ++ RA +L
Sbjct: 533 PDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQL 592
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
EM G +AD T F+ L + ++ R
Sbjct: 593 LQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILR 629
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 112/240 (46%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A F +M P V + ++ + L +M G+ PN+ T ++
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C ++ A +L ++++G +P+ + TL+ G C+ G++ A LF M G
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEG 161
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
V +Y LING CK A+ L G M+ K +P+V YNT+ L + QV AF
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LF EM G++ D +TY + I LC L + K D+ ++N ++D L
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 106/239 (44%), Gaps = 13/239 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+ + P V S+N L K + D + LF + L PD TY+ LI+
Sbjct: 382 VFDTMV-CKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGL 440
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C + R+ + ++ PN VT+ L+ LC + EA AL + +P++
Sbjct: 441 CHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDI 500
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
N I+G+ R G A +LF ++S + V G +D+A +LF +
Sbjct: 501 QVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFRE 560
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
M + + Y ++ RGF N+ + A LL EM+ +G + T + + L +G
Sbjct: 561 MDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 619
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 156/398 (39%), Positives = 236/398 (59%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
PP+ FN + AK KHY T +SL RL G+ PDL+T NILINCFC MG+++ GF V
Sbjct: 305 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSV 364
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +IL+ + P+ VT +LIKGLC + ++ +A KL G + N +Y TLING+ +
Sbjct: 365 LAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 424
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
G T A+ L ++ + VE + V +A LF +M + I+ DVVT
Sbjct: 425 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 484
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+++I GFC EA LL EM+ + + P+V T+ +++D L K GK+ EA +L +M+
Sbjct: 485 YSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVML 544
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ V+P+ F YNTLM+G+ L V +A+ +F +M MG T V +Y+ILING+CK+K ++
Sbjct: 545 KACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVD 604
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL+L+ EM K + PD V Y++L L + ++ + L DEM+ G AD TY + I
Sbjct: 605 EALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLI 664
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
DGLCKN ++ +A+ LF ++ + + L+DGL
Sbjct: 665 DGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGL 702
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 187/373 (50%), Gaps = 46/373 (12%)
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
VL +IL+ + P+ VT +LIKGLC + ++ EA KL G + N +Y TLING+
Sbjct: 50 VLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVC 109
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVV 181
R G T A+ ++ + VE + V +A LF +M + I+ +VV
Sbjct: 110 RIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVV 169
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY+++I GFC EA LL M+ + + PNV T+N+++D LCK GK+ EA +L +M
Sbjct: 170 TYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVM 229
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++ V+ N Y+TLMDG+ L V +A+ +F +M MG T V SY+I+ING+CK K +
Sbjct: 230 LKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRV 289
Query: 302 EGALSLYGEML----------------------------------SKGIKPDVVIYNTLF 327
+ AL+L+ EM+ KGI+PD+ N L
Sbjct: 290 DKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILI 349
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
+ Q+ F + ++ + G T T T I GLC + +A+ L +
Sbjct: 350 NCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQ 409
Query: 388 LDIRAYNCLIDGL 400
L+ +Y LI+G+
Sbjct: 410 LNQVSYATLINGV 422
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 184/354 (51%), Gaps = 14/354 (3%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R + P V ++ + L K + LF + G+ D+ TY+ LI FC +G++
Sbjct: 441 RLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKE 500
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+L ++ P+ T+T L+ L E ++ EA ++ + +P+VFTYNTL+N
Sbjct: 501 AIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMN 560
Query: 131 GLYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENIN 177
G A ++F M+ NG F VD+A LF +M +N+
Sbjct: 561 GYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILING-FCKSKMVDEALNLFKEMHQKNMV 619
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
PD VTY+S++ G C + + L+ EM D+G +V+T+N ++D LCKNG +D+A L
Sbjct: 620 PDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIAL 679
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
+ M G+RPN F + L+DG C GR+ A+E+F + + G V+ Y+++I G+CK
Sbjct: 680 FNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCK 739
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
+E AL++ +M G P+ V ++ + LF+ + ++A KL +M G+
Sbjct: 740 QGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 188/402 (46%), Gaps = 12/402 (2%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP + N L L L +L + G + +Y LIN CK+G
Sbjct: 371 RGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRG 430
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+L +I PN ++++I LC + EA LF+++ V G +V TY+TLI
Sbjct: 431 AIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIY 490
Query: 131 GLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINP 178
G G A+ L EM G EG V +AK + M + P
Sbjct: 491 GFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKP 550
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
DV TY +++ G+ + +A+ + M GV P+V T+ ++++ CK+ +DEA L
Sbjct: 551 DVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLF 610
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
M Q + P+ Y++L+DG C +GR++ +L M G V +Y+ LI+G CKN
Sbjct: 611 KEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKN 670
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
++ A++L+ +M +GI+P+ + L L + +++ A ++F ++ G D + Y
Sbjct: 671 GHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIY 730
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I G CK + EA+ + + C + ++ +I+ L
Sbjct: 731 NVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINAL 772
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 173/351 (49%), Gaps = 24/351 (6%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
P++ TYNIL++ CK G+V VL +L++C N +T+++L+ G + +A +
Sbjct: 201 PNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHV 260
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL 169
F + + G P+V +YN +ING + ALNLF+EM + F
Sbjct: 261 FNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMI-------LSRF--------- 304
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
P ++ + ++ F ++ A L + +G+QP++ T N++++ C G
Sbjct: 305 --------PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMG 356
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
++ +L +++ G P+ NTL+ G CL G+V +A + + G SY+
Sbjct: 357 QITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYA 416
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
LING CK + GA+ L ++ + KP+V +Y+T+ L + V A+ LF EM
Sbjct: 417 TLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVK 476
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G++AD TY T I G C + EA+ L + + D+R Y L+D L
Sbjct: 477 GISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDAL 527
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 179/402 (44%), Gaps = 13/402 (3%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP + N L L L +L + G + +Y LIN C++G
Sbjct: 57 RGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRA 116
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
L +I PN + ++I LC + EA LF+++ V G NV TY+TLI
Sbjct: 117 AIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIY 176
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINP 178
G G AL L M V EG V +AK + M +
Sbjct: 177 GFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKS 236
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
+V+TY++++ G+ + +A+ + M GV P+V ++N++++ CK ++D+A L
Sbjct: 237 NVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLF 296
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
MI + P +N ++D F + A L +E G +F+ +ILIN +C
Sbjct: 297 KEMI-LSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHM 355
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+I S+ ++L +G P V NTL L QV++A D++ G + +Y
Sbjct: 356 GQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSY 415
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
T I+G+CK A++L R + + ++ Y+ +ID L
Sbjct: 416 ATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDAL 457
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 141/292 (48%), Gaps = 24/292 (8%)
Query: 108 ALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKEL 167
++ TK+ G P+ T NTLI GL G AL+ +++ + +GF
Sbjct: 49 SVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLA-------QGF------- 94
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
+ V+Y ++I G C D A L ++ + +PNV +N I+D LCK
Sbjct: 95 ---------QLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCK 145
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
+ EA L M G+ N Y+TL+ GFC+ G++ A L M V +
Sbjct: 146 YQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCT 205
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y+IL++ CK +++ A S+ ML +K +V+ Y+TL F +++V++A +F+ M
Sbjct: 206 YNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMS 265
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
GV D +Y I+G CK + +A+ LF+ + IL I +N ++D
Sbjct: 266 LMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEM-ILSRFPPIIQFNKILDS 316
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%)
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
+LS+ ++L +G PD V NTL L QV+ A D++ G + +Y T I+
Sbjct: 47 SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G+C+ A++ R + + ++ YN +ID L
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDAL 143
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 156/397 (39%), Positives = 224/397 (56%), Gaps = 24/397 (6%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F ML+M P PPP+ F L +AK KHY TVLSL K+++S G+ PD+YT I+IN FC
Sbjct: 44 FHRMLHMHP-PPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFC 102
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ RV VL +IL+ P+ TFT+L++GLC +I EA +F K+ G +PNV
Sbjct: 103 HLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVV 162
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
TY TL+NGL + ALNLF EM + + I+PD+ TY
Sbjct: 163 TYGTLMNGLCKDRQLTEALNLFSEMIA-----------------------KGISPDIFTY 199
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
S+I C +W LL EM+ + PNVV+ N+++D LCK GK+ EA ++D+MIQ
Sbjct: 200 NSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQ 259
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
GV P+ Y LMDG CL ++ A ++F M GC V SY+ LINGYCK + I+
Sbjct: 260 GGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDK 319
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A+ L+ EM + + P+ + Y+TL L + +++ A LF+EM G + TY +D
Sbjct: 320 AMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLD 379
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LCKN + EA+ L + + + D++ YN IDG+
Sbjct: 380 YLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGM 416
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 188/368 (51%), Gaps = 15/368 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+ P V ++ L L K++ L+LF + + G+ PD++TYN LI+
Sbjct: 148 VFDKMVG-EGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHAL 206
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C + H +L +++S PN V+ ++ LC E ++ EA + + G EP+V
Sbjct: 207 CNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDV 266
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFL 169
TY L++G A+ +F+ M NG ++ +DKA LF
Sbjct: 267 VTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQR-IDKAMYLFE 325
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M + + P+ +TY+++I G C+ +A L EM+ G PN+VT+++++D LCKN
Sbjct: 326 EMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNH 385
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
++ EA LL + + P+ VYN +DG C G + A++LF ++ G V++++
Sbjct: 386 RLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHN 445
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
I+I G CK ++ A L+ EM G + YNT+ L + ++ RA +L +EM
Sbjct: 446 IMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLAR 505
Query: 350 GVAADTWT 357
G +AD T
Sbjct: 506 GFSADVST 513
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 132/278 (47%), Gaps = 23/278 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L D + +F + G ++ +YN LIN +CK+ R+ +
Sbjct: 264 PDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYL 323
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R PN +T+++LI GLC R+ +A ALF ++ G PN+ TY+ L++ L +
Sbjct: 324 FEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCK 383
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
A+ L + +EG N++PDV Y I G C A
Sbjct: 384 NHRLAEAMALLK---------AIEG--------------SNLDPDVQVYNIAIDGMCRAG 420
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
D A+ L + +G+QP+V T N+++ LCK G +DEAS+L M + G N YN
Sbjct: 421 DLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYN 480
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
T+ G + +RA +L M + G + V + ++L+
Sbjct: 481 TITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLV 518
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 121/239 (50%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A F +M + P + + ++ ++ L +M G+ P+V T +
Sbjct: 37 LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C ++D A +L ++++G +P+ + TL+ G C+ G++ A ++F M G
Sbjct: 97 VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
V +Y L+NG CK++++ AL+L+ EM++KGI PD+ YN+L L + + +
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVT 216
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
L +EM + + + + +D LCK + EA ++ + E D+ Y L+DG
Sbjct: 217 TLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDG 275
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 13/232 (5%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V S+N L K + D + LF+ + L P+ TY+ LI+ C +GR+ +
Sbjct: 301 VVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFN 360
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ PN VT++ L+ LC R+ EA AL + +P+V YN I+G+ R G
Sbjct: 361 EMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAG 420
Query: 137 HTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYT 184
A +LF +A + V G +D+A +LF +M + + TY
Sbjct: 421 DLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYN 480
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
++ +G N + A LL EM+ +G +V T +++ L +G +D++ +
Sbjct: 481 TITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDG-LDQSVK 531
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 81/170 (47%)
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+D+A M+ + P F + L+ + L M+S G V++ +I
Sbjct: 37 LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+IN +C ++ ALS+ ++L G +PD + TL L + ++ A +FD+M +G
Sbjct: 97 VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ TY T ++GLCK+ + EA+ LF + DI YN LI L
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHAL 206
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 90/207 (43%)
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
N ++A M+ P + F ++ + K L M G+ P+ +
Sbjct: 35 NTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTL 94
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
+++ FC RV+ A + + +G +++ L+ G C +I AL ++ +M+
Sbjct: 95 TIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVG 154
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+G +P+VV Y TL L + Q+ A LF EM G++ D +TY + I LC
Sbjct: 155 EGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKH 214
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
L + K ++ + N ++D L
Sbjct: 215 VTTLLNEMVKSKIMPNVVSLNIVVDAL 241
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 152/411 (36%), Positives = 238/411 (57%), Gaps = 15/411 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAK--NKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
F+++L +P+ + FN + G L K N HY T +SL +RL G+ PD++T+NILINC
Sbjct: 54 FNHLLRTKPTSS-IIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINC 112
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
+C M ++ F ++ +IL+ + P+ +TF +LIKGLC ++ EA + G +
Sbjct: 113 YCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLD 172
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFL 169
F+Y TLINGL + G T AL + ++ + V V A EL+
Sbjct: 173 QFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYS 232
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
QM + I+PDVVT++++I GFC EA L EM+ + + P+ TFN+++D LCK G
Sbjct: 233 QMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEG 292
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+ A +L +M++ GV PN Y++LMDG+CL +VN+AK + ++ MG SY
Sbjct: 293 NLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYC 352
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
+ING+CK K ++ ALSL+ +M KGI PD V YN+L L + ++ A++L DEM +
Sbjct: 353 TMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDN 412
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G A+ +TY ID LCKN ++ +A+ L + ++ + D+ +N LI GL
Sbjct: 413 GQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGL 463
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 190/398 (47%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FN L L N L + + G D ++Y LIN CK+G +
Sbjct: 136 PDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQM 195
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +I N V + ++I LC +++A L++++ P+V T++ LI G
Sbjct: 196 LRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCI 255
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G A LF EM N EG + AK + + M E + P+VVT
Sbjct: 256 VGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVT 315
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+S++ G+C N N+AK +L + G PN ++ +++ CK +DEA L + M
Sbjct: 316 YSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQ 375
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ P+ YN+L+DG C +GR++ A EL M G +F+Y+ LI+ CKN ++
Sbjct: 376 FKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVD 435
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A++L ++ +GI+PD+ +N L L ++ +++ A +F ++ G + + WTY +
Sbjct: 436 QAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMV 495
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+GLCK EA L + D Y LI L
Sbjct: 496 NGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQAL 533
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 179/353 (50%), Gaps = 27/353 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFG-CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
++ M+ + SP V +++G C+ + LF+ + + PD YT+NIL++
Sbjct: 230 LYSQMIAKKISPDVVTFSALIYGFCIVG--QLEEAFGLFREMVLKNINPDYYTFNILVDA 287
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK G + +L +++ PN VT++SL+ G C +++ +A + + G PN
Sbjct: 288 LCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPN 347
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
+Y T+ING + VD+A LF M+ + I PD V
Sbjct: 348 AHSYCTMINGFCKIK-----------------------MVDEALSLFNDMQFKGIAPDKV 384
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY S+I G C + + A L+ EM D G N+ T+N ++D LCKN +D+A L+ +
Sbjct: 385 TYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKI 444
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
G++P+ + +N L+ G C GR+ A+++F + S G + ++Y+I++NG CK
Sbjct: 445 KDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLF 504
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM-QRDGVAA 353
+ A +L +M GI PD V Y TL LF + E+A KL EM RD V A
Sbjct: 505 DEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVVYA 557
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
P + ++N L L KN H D ++L K++ G+ PD+YT+NILI CK+GR+ +
Sbjct: 414 QPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQ 473
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
V +L ++ NA T+ ++ GLC E EA AL +K+ G P+ TY TLI L
Sbjct: 474 DVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQAL 533
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDE 174
+ A L EM + + + +EG E+ L ++ E
Sbjct: 534 FHKDENEKAEKLLREMIARDVVYALEGL-----EMVLHLESE 570
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 155/409 (37%), Positives = 239/409 (58%), Gaps = 13/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F++M++ P P + F+ L L + KHY TVLSL KR+ + D++ +NILINCF
Sbjct: 72 FNHMIHKHP-LPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFS 130
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
++ RV F VLG+I++ F P+AVTF+SLI GLC E + A F ++ G +PN+
Sbjct: 131 RLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLH 190
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
TYNT+I G + G T VA+ L ++M G + + V +A ++F ++
Sbjct: 191 TYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEI 250
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
K + + PDV TY+ ++ G C ++ EA L EMM + P+VVTFN+++D+LCK G +
Sbjct: 251 KGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGML 310
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA ++ +MI+ GV PN YN+LM+G+CL +V A+ +F +M + GC V SY+IL
Sbjct: 311 SEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNIL 370
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
INGYCK + I+ A L+ EM +G+ P+ YNTL L + + A +LF +MQ G
Sbjct: 371 INGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGC 430
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ D T +D LCK Y+ A+ LFR ++ + ++ Y+ LI +
Sbjct: 431 SPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAM 479
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 184/336 (54%), Gaps = 12/336 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F+ L L + + F + ++G P+L+TYN +I FCK+G+ + +
Sbjct: 152 PDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGL 211
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ ++ P+ V + ++I GLC + + EA +F++++ G P+VFTY+ L++GL
Sbjct: 212 LKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCN 271
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+ A LF EM S N + EG + +A+ + M ++ + P+ T
Sbjct: 272 SDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYAT 331
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S++ G+C N EA+ + M+ +G PNVV++N++++ CK ++DEA L D M
Sbjct: 332 YNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMS 391
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ PN F YNTL+ G C GR A+ELF M++ GC+ + + +IL++ CK ++
Sbjct: 392 FRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLD 451
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
AL L+ M +KP++V Y+ L +++ ++ R
Sbjct: 452 NALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKIYR 487
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 156/337 (46%), Gaps = 23/337 (6%)
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C + + ++ P V F L+ L +L ++ + E +V
Sbjct: 60 CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
F +N LIN R A ++ ++ + G E PD VT
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKII----KLGFE-------------------PDAVT 156
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
++S+I G C+ + + A EM+ G QPN+ T+N I+ CK GK A LL M
Sbjct: 157 FSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMD 216
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G RP+ +YNT++DG C V+ A ++F ++ G VF+YSIL++G C + + E
Sbjct: 217 KAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKE 276
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A +L+ EM+S I PDVV +N L L + + A + M GV + TY + +
Sbjct: 277 EASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLM 336
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+G C + + EA +F + C ++ +YN LI+G
Sbjct: 337 NGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILING 373
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M + R P ++N L L + + LFK + + G PDL T IL++
Sbjct: 386 LFDEM-SFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSL 444
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRI 103
CK+G + + + + SC PN VT+ LI+ + +I
Sbjct: 445 CKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 150/409 (36%), Positives = 236/409 (57%), Gaps = 12/409 (2%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ +L+ + P + F + G L K+ HY TV+SL +++ G+ DL +ILINCF
Sbjct: 59 FNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFS 118
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
++G+ F VL +IL+ + PN +T T+LIKGLC + +I +A K+ G N
Sbjct: 119 QLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKV 178
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQM 171
+Y TLINGL + G T AL L + + V + V++A +L+ +M
Sbjct: 179 SYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 238
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+PDVVTY ++I GFC +A L +M+ + + PNV TFN+++D CK ++
Sbjct: 239 VSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRL 298
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA +L +M++ G++P+ F YN+LMD +CL VN+AK +F ++ G + SYSI+
Sbjct: 299 KEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIM 358
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I+G+CK K+++ A++L+ EM I PDVV YN+L L ++ ++ A KL DEM GV
Sbjct: 359 IHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGV 418
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D TY + +D LCKN + +A+ L ++ + DI Y L+DGL
Sbjct: 419 PHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGL 467
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 178/349 (51%), Gaps = 12/349 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N + + K K + L+ + S G+ PD+ TYN LI+ FC +G++ +
Sbjct: 210 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDL 269
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ PN TF L+ G C E R+ EA + + G +P+VFTYN+L++
Sbjct: 270 FNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCL 329
Query: 135 TGHTIVALNLFEEMAS-------GNGEFGVEGF-----VDKAKELFLQMKDENINPDVVT 182
A ++F ++ + + GF VD+A LF +M NI PDVVT
Sbjct: 330 VKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVT 389
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S+I G C + A L+ EM D+GV + +T+N I+D LCKN ++D+A LL M
Sbjct: 390 YNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMK 449
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G++P+ Y TL+DG C GR+ A+ +F + G V Y+ +I G+C + +
Sbjct: 450 DEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFD 509
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
+L L +M G P+ V Y + LF+ + ++A KL EM G+
Sbjct: 510 ESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 66/140 (47%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P ++N + L KN D ++L ++ G+ PD+ TY L++ CK GR+
Sbjct: 416 RGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLED 475
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+V +L + + +T++I+G C+ E+ L +K+ GC PN TY +I
Sbjct: 476 ARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIIC 535
Query: 131 GLYRTGHTIVALNLFEEMAS 150
L+ A L EM +
Sbjct: 536 SLFDKDENDKAEKLLREMIT 555
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 151/402 (37%), Positives = 238/402 (59%), Gaps = 12/402 (2%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R + PP FN + G L K+KHY TVL L +++ G+ P+L NILINCFC++G +
Sbjct: 79 RNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPF 138
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
F V +IL+ + P+ +TFT+LIKGLC + +I +A K+ G + +Y TLI+
Sbjct: 139 AFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIH 198
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINP 178
GL + G T AL+L + + + V + V++A +LF +M + I+P
Sbjct: 199 GLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISP 258
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
DVVTY+++I GFC N+A L +M+ + ++P+V TFN++++ CK+GKM E +
Sbjct: 259 DVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVF 318
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
D+M++ G++PN YN+LMDG+CL VN+AK +F +M G + SYSI+ING+CK
Sbjct: 319 DMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKI 378
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
K+ + A++L+ EM K I PDVV Y++L L + ++ A +L D+M GV TY
Sbjct: 379 KKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTY 438
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +D LCK + +A+ L L+ + ++ Y+ LI GL
Sbjct: 439 NSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGL 480
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 181/350 (51%), Gaps = 14/350 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N + + K K + LF + S G+ PD+ TY+ LI+ FC +G+++ +
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDL 282
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ P+ TF L+ C + ++ E +F + G +PN TYN+L++G
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCL 342
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
A ++F MA G NG ++ F D+A LF +M +NI PDVV
Sbjct: 343 VKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKF-DEAMNLFKEMHRKNIIPDVV 401
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY+S+I G + + A L+ +M D+GV P + T+N I+D LCK ++D+A LL +
Sbjct: 402 TYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKL 461
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
G++PN + Y+ L+ G C +G++ A+++F + G V +Y+I+I G+C
Sbjct: 462 KDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLF 521
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
AL+L +M G PD Y + + LF+ + + A KL EM GV
Sbjct: 522 NEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGV 571
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 189/379 (49%), Gaps = 23/379 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S+ L L K L L +R++ + P++ YN +I+ CK+ V+ F + +
Sbjct: 192 SYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEM 251
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ +P+ VT+++LI G C ++ +A LF K+ + +P+V+T+N L+N
Sbjct: 252 ISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNA------- 304
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
F +G + + K +F M + I P+ VTY S++ G+C + N+
Sbjct: 305 ----------------FCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
AK + M GV P++ +++++++ CK K DEA L M + + P+ Y++L+D
Sbjct: 349 AKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLID 408
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G +GR++ A +L M G T+ +Y+ +++ CK +++ A++L ++ KGI+P
Sbjct: 409 GLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQP 468
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
++ Y+ L L + ++E A K+F+ + G + TY I G C EA+ L
Sbjct: 469 NMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALL 528
Query: 379 RTLRILKCELDIRAYNCLI 397
+ C D + Y +I
Sbjct: 529 SKMEDNGCIPDAKTYEIII 547
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 170/330 (51%), Gaps = 13/330 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F M++ SP V ++ G K D + LF ++ + PD+YT+NIL+N
Sbjct: 245 FDLFSEMISKGISPDVVTYSALISGFCILGKLNDAI-DLFNKMILENIKPDVYTFNILVN 303
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
FCK G++ G V +++ PN VT+ SL+ G C + +A ++F + G P
Sbjct: 304 AFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNP 363
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELF 168
++ +Y+ +ING + A+NLF+EM N G + A +L
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLV 423
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
QM D + P + TY S++ C + ++A LL ++ D+G+QPN+ T+++++ LC++
Sbjct: 424 DQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQS 483
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
GK+++A ++ + ++ G N Y ++ GFC+ G N A L ME GC +Y
Sbjct: 484 GKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTY 543
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKP 318
I+I K E + A L EM+++G++P
Sbjct: 544 EIIILSLFKKDENDMAEKLLREMIARGVRP 573
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 125/256 (48%)
Query: 145 FEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
F +S + F VD A LF ++ N P + ++ + ++ L
Sbjct: 50 FISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQ 109
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
+M +G++PN+V N++++ C+ G + A + ++++G P+ + TL+ G CL G
Sbjct: 110 KMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKG 169
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
++ +A + ++G SY LI+G CK E AL L + ++P+VV+YN
Sbjct: 170 QIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYN 229
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
T+ + ++ V AF LF EM G++ D TY I G C + +A++LF + +
Sbjct: 230 TIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILE 289
Query: 385 KCELDIRAYNCLIDGL 400
+ D+ +N L++
Sbjct: 290 NIKPDVYTFNILVNAF 305
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 113/215 (52%), Gaps = 12/215 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S++I+ K K +D ++LFK ++ + PD+ TY+ LI+ K GR+S+ +
Sbjct: 363 PDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQL 422
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ ++ P T+ S++ LC ++ +A AL TKL+ G +PN++TY+ LI GL +
Sbjct: 423 VDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQ 482
Query: 135 TGHTIVALNLFEEM-ASGNG-----------EFGVEGFVDKAKELFLQMKDENINPDVVT 182
+G A +FE + G+ F VEG ++A L +M+D PD T
Sbjct: 483 SGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKT 542
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
Y +I ++ + A+ LL EM+ +GV+P +
Sbjct: 543 YEIIILSLFKKDENDMAEKLLREMIARGVRPRQIA 577
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 88/187 (47%)
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
N ++++ N +D+A L + +++ P AF +N ++ + + L
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
ME G + + +ILIN +C+ I A S++ ++L G PD + + TL L
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
Q+++AF D++ G D +Y T I GLCK A++L + + + ++ Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228
Query: 394 NCLIDGL 400
N +ID +
Sbjct: 229 NTIIDSM 235
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 155/409 (37%), Positives = 233/409 (56%), Gaps = 13/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML+M P PP + F + + K K Y TVLSL ++++S G+ ++YT N+LIN FC
Sbjct: 62 FNRMLHMHP-PPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFC 120
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ RV+ F VL +IL+ P+ +FT+LIKGLC E +I EA LF K+ G +P+V
Sbjct: 121 HLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVV 180
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
Y TLINGL +TGHT A+ L M GN + V + +A LF +M
Sbjct: 181 IYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEM 240
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+P++VT S++ C +W LL EM+D + PN ++ ++D LCK G +
Sbjct: 241 ITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMV 300
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
+A ++D+M Q GV P+ Y L+DG CL ++ A ++F M GC VFSY+ L
Sbjct: 301 AQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTL 360
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
INGYCK + ++ A+ L+ EM + + P+ V YNTL L + +++ A LF EM G
Sbjct: 361 INGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQ 420
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D TYR +D LCKN ++ +A+ L + + + DI+ Y +IDG+
Sbjct: 421 IPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGM 469
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 116/274 (42%), Gaps = 35/274 (12%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A F +M + P +V + ++ ++ L +M G+ NV T NV
Sbjct: 55 LDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNV 114
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C +++ A +L ++++G +P+ + TL+ G CL G++ A LF M G
Sbjct: 115 LINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEG 174
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
V Y+ LING CK A+ L M +PDVV+Y TL L + Q +AF
Sbjct: 175 FQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAF 234
Query: 341 KLFDEMQRDGVAAD---------------TWTY--------------------RTFIDGL 365
LF EM G++ + W + T +D L
Sbjct: 235 NLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDAL 294
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
CK + +A ++ + E D+ Y LIDG
Sbjct: 295 CKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDG 328
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 127/264 (48%), Gaps = 16/264 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M++ + P V S+N L K + D + LF+ + L P+ TYN LI+
Sbjct: 341 VFDMMVH-KGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGL 399
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +GR+ + ++ P+ VT+ L+ LC + +A AL + +P++
Sbjct: 400 CHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDI 459
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
Y +I+G+ R G A +LF ++S + V G +D+A +LF++
Sbjct: 460 QIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFME 519
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG- 229
M + + D TY ++ +GF N+ + A LL EM+ +G +V T +++ L +G
Sbjct: 520 MDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGL 579
Query: 230 KMDEASRLLDLM--IQIGVRPNAF 251
EA +L D+ ++I V+ F
Sbjct: 580 DQSEAHKLEDMFPHLRIQVKDTVF 603
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%)
Query: 190 FCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
+ + N ++A M+ P++V F I+ + K + L M G+ N
Sbjct: 49 YLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHN 108
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
+ N L++ FC RVN A + + +GC S++ LI G C +I AL L+
Sbjct: 109 VYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFD 168
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
+M+ +G +PDVVIY TL L + A +L M++ D Y T I LCK+
Sbjct: 169 KMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDR 228
Query: 370 YIVEAVELFRTL 381
+A LF +
Sbjct: 229 QQTQAFNLFSEM 240
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 152/411 (36%), Positives = 236/411 (57%), Gaps = 15/411 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAK--NKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
F ML MRP+P + FN + G + K N HY T +SL +L G+ P + T+NIL+NC
Sbjct: 45 FHRMLRMRPTPS-IVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNC 103
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
+C +G ++ F + +IL+ + P +TF +LI G+C ++ EA + G +
Sbjct: 104 YCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLD 163
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFL 169
+Y TLINGL + G T AL + +++ V + V A +L+
Sbjct: 164 QVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYS 223
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M + I+PDVVT+ S+I GFC EA L EM+ + + P+V TF++++D LCK+G
Sbjct: 224 EMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDG 283
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+ A +L +M++ GV P+ Y++LMDG+CL VN+AK +F +M +G SY+
Sbjct: 284 NITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYN 343
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
I+ING K K ++ ALSL+ EM KGI PD V YN+L L ++ ++ A++L DEM +
Sbjct: 344 IMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNN 403
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G+ AD TY + ID LCKN +I +A+ L + ++ + + YN LIDGL
Sbjct: 404 GIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGL 454
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 176/346 (50%), Gaps = 24/346 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ ++ M+ R SP V +FN L LF + + PD+YT++IL++
Sbjct: 219 YQLYSEMITKRISPD-VVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVD 277
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK G ++ +L +++ P+ VT++SL+ G C + + +A +F+ + G P
Sbjct: 278 ALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAP 337
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
+ +YN +INGL G VD+A LF +M + I PD
Sbjct: 338 HAHSYNIMINGL-----------------------GKIKMVDEALSLFKEMCCKGIAPDT 374
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY S+I G C + A L+ EM + G+ +++T+N ++D LCKN +D+A L+
Sbjct: 375 VTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKK 434
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+ G++P+ + YN L+DG C GR+ A+++F + G + ++Y+I+ING CK
Sbjct: 435 IKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGL 494
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
A L +M + GI PD V Y T+ LF + E+A KL EM
Sbjct: 495 FNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREM 540
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 150/402 (37%), Positives = 236/402 (58%), Gaps = 12/402 (2%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R + PP FN + G L K+KHY TVL L +++ G+ P+L NILINCFC++G +
Sbjct: 79 RNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPF 138
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
F V +IL+ + P+ +TFT+L KGLC + +I +A K+ G + +Y TLI+
Sbjct: 139 AFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIH 198
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINP 178
GL + G T AL+L + + + V + V++A +LF +M + I+P
Sbjct: 199 GLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISP 258
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
DVVTY+++I GFC +A L +M+ + ++P+V TFN++++ CK+GKM E +
Sbjct: 259 DVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVF 318
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
D+M++ G++PN YN+LMDG+CL VN+AK +F +M G + SYSI+ING+CK
Sbjct: 319 DMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKI 378
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
K+ + A++L+ EM K I PDVV Y++L L + ++ A +L D+M GV + TY
Sbjct: 379 KKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTY 438
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +D LCK + +A+ L + + DI Y+ LI GL
Sbjct: 439 NSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGL 480
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 181/355 (50%), Gaps = 14/355 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N + + K K + LF + S G+ PD+ TY+ LI+ FC +G++ +
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDL 282
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ P+ TF L+ C + ++ E +F + G +PN TYN+L++G
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCL 342
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
A ++F MA G NG ++ F D+A LF +M +NI PDVV
Sbjct: 343 VKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKF-DEAMNLFKEMHRKNIIPDVV 401
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY+S+I G + + A L+ +M D+GV PN+ T+N I+D LCK ++D+A LL
Sbjct: 402 TYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKF 461
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
G +P+ Y+ L+ G C +G++ A+++F + G V++Y+I+I G+C
Sbjct: 462 KDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLF 521
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
AL+L +M G PD Y + + LF+ + + A KL EM G+ + +
Sbjct: 522 NEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLNFY 576
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 187/379 (49%), Gaps = 23/379 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S+ L L K L L +R++ + P++ YN +I+ CK+ V+ F + +
Sbjct: 192 SYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEM 251
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ +P+ VT+++LI G C ++ +A LF K+ + +P+V+T+N L+N
Sbjct: 252 VSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNA------- 304
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
F +G + + K +F M + I P+ VTY S++ G+C + N+
Sbjct: 305 ----------------FCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
AK + M GV P++ +++++++ CK K DEA L M + + P+ Y++L+D
Sbjct: 349 AKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLID 408
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G +GR++ A +L M G + +Y+ +++ CK +++ A++L + KG +P
Sbjct: 409 GLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQP 468
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
D+ Y+ L L + ++E A K+F+++ G D + Y I G C EA+ L
Sbjct: 469 DISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALL 528
Query: 379 RTLRILKCELDIRAYNCLI 397
+ C D + Y +I
Sbjct: 529 SKMEDNGCIPDAKTYEIII 547
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 124/255 (48%)
Query: 145 FEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
F +S + F VD A LF ++ N P + ++ + ++ L
Sbjct: 50 FISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQ 109
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
+M +G++PN+V N++++ C+ G + A + ++++G P+ + TL G CL G
Sbjct: 110 KMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKG 169
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
++ +A + ++G SY LI+G CK E AL L + ++P+VV+YN
Sbjct: 170 QIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYN 229
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
T+ + ++ V AF LF EM G++ D TY I G C + +A++LF + +
Sbjct: 230 TIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILE 289
Query: 385 KCELDIRAYNCLIDG 399
+ D+ +N L++
Sbjct: 290 NIKPDVYTFNILVNA 304
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 68/140 (48%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP +C++N + L K D ++L + G PD+ TY+ILI C+ G++
Sbjct: 429 RGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLED 488
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
V +L + + +T +I+G C E EA AL +K+ GC P+ TY +I
Sbjct: 489 ARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIIL 548
Query: 131 GLYRTGHTIVALNLFEEMAS 150
L++ +A L EM +
Sbjct: 549 SLFKKDENDMAEKLLREMIA 568
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 88/187 (47%)
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
N ++++ N +D+A L + +++ P AF +N ++ + + L
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
ME G + + +ILIN +C+ I A S++ ++L G PD + + TL L
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
Q+++AF D++ G D +Y T I GLCK A++L + + + ++ Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228
Query: 394 NCLIDGL 400
N +ID +
Sbjct: 229 NTIIDSM 235
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 160/409 (39%), Positives = 232/409 (56%), Gaps = 13/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F++M+N P P + F LF L + KHY TV+SL K++ G+ D+ + ILINCFC
Sbjct: 79 FNHMVNTNPLPS-IVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFC 137
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
++ V +GF VLG+I++ PN +TF++LI G C E +I A LF + G +PNV
Sbjct: 138 RLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVH 197
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
+Y+ +I GL R G T + L E M E V + V++A +F +M
Sbjct: 198 SYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKM 257
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
K I P VVTYTS+I G W EA LL EM + P++V F+V++D +CK G++
Sbjct: 258 KGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEV 317
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA +L M ++GV P+ YNTLM+G+CL V A+++F M S G VFS+SIL
Sbjct: 318 SEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSIL 377
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
+NGYCK K I+ A L+ EM +G+ PD V YNTL L + + A +LF +M +G
Sbjct: 378 VNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGY 437
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ TY +D L K Y+ +A+ LFR + + D+ YN +IDG+
Sbjct: 438 PPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGM 486
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 153/316 (48%), Gaps = 12/316 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N + L K++ + + +F ++ TG+ P + TY LI+ +GR F +
Sbjct: 229 PDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGL 288
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P+ V F+ LI +C E + EA + + G EP+V TYNTL+NG
Sbjct: 289 LNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCL 348
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
+ A +FE M S V F +D+AK+LF +M + PD V+
Sbjct: 349 RMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVS 408
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G C A EA+ L +M G PN+VT+++++D L K G +D+A L M
Sbjct: 409 YNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAME 468
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G++P+ YN ++DG C G+ A+ELF + G + + I+G CK ++
Sbjct: 469 NSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLD 528
Query: 303 GALSLYGEMLSKGIKP 318
A + +M P
Sbjct: 529 EAHKAFRQMEKDDCSP 544
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 35/274 (12%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
++ A F M + N P +V + + + L +M G+ +V++ +
Sbjct: 72 INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C+ +D +L +I++G+ PN ++TL++GFC+ G++ RA ELF M + G
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF------------- 327
V SYSI+I G C+ + + L M G +PDVVIYNT+
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251
Query: 328 --------------VVLFE--IHQV------ERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
VV + IH + + AF L +EM+ + D + ID +
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIM 311
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
CK + EA + +T+ + E D+ YN L++G
Sbjct: 312 CKEGEVSEARVILKTMTEMGVEPDVATYNTLMNG 345
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + +++IL CL+K + D + LF+ + ++GL PDL TYNI+I+ CK G+
Sbjct: 438 PPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARE 497
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+ + PN T I G+C + EA F ++ C P
Sbjct: 498 LFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 66/170 (38%), Gaps = 35/170 (20%)
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+++A + M+ P+ + L L ME G +H V S +I
Sbjct: 72 INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LIN +C+ ++ S+ G+++ G++P+V+
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVI----------------------------- 162
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
T+ T I+G C I A+ELF + + ++ +Y+ +I GL
Sbjct: 163 ------TFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGL 206
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 156/409 (38%), Positives = 234/409 (57%), Gaps = 13/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F M+ + P P V F G AK K Y TV+SL +++ + ++Y+ NILINC C
Sbjct: 81 FYRMVRINPRPS-VVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLC 139
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
++ V VLG++ + P+A+TF +LI GLC E +I EA LF ++ G EPNV
Sbjct: 140 RLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVI 199
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
+Y T+INGL +TG+T +A+++F++M + V + V+ A E +M
Sbjct: 200 SYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEM 259
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I P+V TY S++ GFC NEA L EM+ + V PN VTF +++D LCK G +
Sbjct: 260 VERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMV 319
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA + + M + GV P+ YN LMDG+CL +N AK++F M GC SY+IL
Sbjct: 320 SEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNIL 379
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
INGYCK++ ++ A SL EM K + PD V Y+TL L ++ + + A LF EM G
Sbjct: 380 INGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGP 439
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ TY +DG CK+ ++ EA++L ++++ K E +I Y LI+G+
Sbjct: 440 HPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGM 488
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 203/430 (47%), Gaps = 47/430 (10%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V S NIL CL + H D +S+ ++ G+ PD T+N LIN C G++ +
Sbjct: 128 VYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFN 187
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV-------------- 122
+++ PN +++T++I GLC A +F K+ GC+PNV
Sbjct: 188 EMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDR 247
Query: 123 ---------------------FTYNTLINGLYRTGHTIVALNLFEEMASGN--------- 152
FTYN++++G G A LF+EM +
Sbjct: 248 LVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFT 307
Query: 153 ---GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
EG V +A+ +F M ++ + PD+ TY +++ G+C NEAK + M+ +
Sbjct: 308 ILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRK 367
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
G P ++N++++ CK+ +MDEA LL M + P+ Y+TLM G C GR A
Sbjct: 368 GCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEA 427
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
LF M S G + +Y IL++G+CK+ ++ AL L M K ++P++V Y L
Sbjct: 428 LNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEG 487
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
+F ++E A +LF ++ DG D TY I GL K EA +LFR + +
Sbjct: 488 MFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPN 547
Query: 390 IRAYNCLIDG 399
+YN +I G
Sbjct: 548 SCSYNVMIQG 557
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 123/274 (44%), Gaps = 35/274 (12%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
VD A F +M N P VV + + F ++ L +M V NV + N+
Sbjct: 74 VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ LC+ +D + +L M ++G+ P+A +N L++G C G++ A ELF M G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193
Query: 281 CTHTVFSYSILING-----------------------------------YCKNKEIEGAL 305
V SY+ +ING CK++ + A+
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
EM+ +GI P+V YN++ + Q+ A +LF EM V +T T+ +DGL
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
CK + EA +F T+ E DI YN L+DG
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMDG 347
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 154/409 (37%), Positives = 233/409 (56%), Gaps = 13/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F M+ M P P V F G AK K Y TV+SL +++ G+ ++Y+ N+LINC C
Sbjct: 76 FYRMVRMNPRPS-VAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLC 134
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
++ V +LG++ + P A TF +LI GLC E +I EA LF ++ G EPNV
Sbjct: 135 RLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVI 194
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
+YNT+INGL +TG+T +A+++F++M + V + V+ A E +M
Sbjct: 195 SYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEM 254
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
D I P+V TY ++ GFC NEA L EM+ + V P+ VT +++D LCK G +
Sbjct: 255 LDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMV 314
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA + + M + GV PN YN LMDG+CL +N AK++F M GC V SY+IL
Sbjct: 315 SEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNIL 374
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
ING+CK++ ++ A SL EM K + PD V Y+TL L + + + A +F EM G+
Sbjct: 375 INGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGL 434
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ TY +DG CK+ ++ EA++L ++++ K E +I + LI+G+
Sbjct: 435 LPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGM 483
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/397 (30%), Positives = 198/397 (49%), Gaps = 12/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FN L L + LF + G P++ +YN +IN CK G S V
Sbjct: 156 PTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDV 215
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ ++ P+ VT+ ++I LC + + +A +++ G PNVFTYN +++G
Sbjct: 216 FKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCI 275
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G A LF+EM + EG V +A+ +F M ++ + P++ T
Sbjct: 276 LGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNIST 335
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++ G+C NEAK + M+ QG P V ++N++++ CK+ +MDEA LL M
Sbjct: 336 YNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMY 395
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ P+ Y+TLM G C GR A +F M S G + +YSIL++G+CK+ ++
Sbjct: 396 HKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLD 455
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL L M K ++P++V + L +F ++E A +LF ++ DG+ TY I
Sbjct: 456 EALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMI 515
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
GL K EA +LFR + + +YN +I G
Sbjct: 516 KGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQG 552
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 189/384 (49%), Gaps = 23/384 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + L K++ + + + G+ P+++TYN +++ FC +G+++ +
Sbjct: 226 PDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRL 285
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ P+ VT T L+ GLC E + EA +F + G EPN+ TYN L++G
Sbjct: 286 FKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDG--- 342
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ ++ +++AK++F M + P V +Y +I GFC +
Sbjct: 343 --------------------YCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSR 382
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+EAK LL EM + + P+ VT++ +M LC+ G+ EA + M G+ PN Y+
Sbjct: 383 RMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYS 442
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DGFC G ++ A +L SM+ + ++ILI G ++E A L+ ++ +
Sbjct: 443 ILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFAD 502
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
GI+P + Y + L + + A+ LF +M+ DG ++ +Y I G +N A
Sbjct: 503 GIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTA 562
Query: 375 VELFRTLRILKCELDIRAYNCLID 398
+ L + + ++ + L+D
Sbjct: 563 IRLIDEMVGKRFSANLSTFQMLLD 586
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 122/274 (44%), Gaps = 35/274 (12%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A F +M N P V + + F ++ L +M GV NV + NV
Sbjct: 69 IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ LC+ +D A +L M ++G+ P A +N L++G C G++ A ELF M G
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE-------- 332
V SY+ +ING CK A+ ++ +M G KPDVV YNT+ L +
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248
Query: 333 ---------------------IH------QVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
+H Q+ A +LF EM V DT T +DGL
Sbjct: 249 EFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGL 308
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
CK + EA +F T+ E +I YN L+DG
Sbjct: 309 CKEGMVSEARLVFETMTEKGVEPNISTYNALMDG 342
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 88/173 (50%)
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
N +D+A M+++ RP+ + + F + + L M+ G TH V+S
Sbjct: 66 NISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYS 125
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
++LIN C+ ++ A+S+ G+M GI P +N L L +++ A +LF+EM
Sbjct: 126 LNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMV 185
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
R G + +Y T I+GLCK AV++F+ + C+ D+ YN +ID L
Sbjct: 186 RRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSL 238
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 155/409 (37%), Positives = 230/409 (56%), Gaps = 13/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
FD ML MRP PPP FN + L NKHY TV+SLFK+ S G PDL T NIL+NCFC
Sbjct: 51 FDRMLLMRP-PPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFC 109
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ ++ F VL IL+ + PNA+T +LIKGLC I +A ++ G + N
Sbjct: 110 HLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQV 169
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
+Y TLINGL +TG T L ++ + + V + A +L+ +M
Sbjct: 170 SYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEM 229
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+P+VVTY +++ GFC EA LL EM + + P+V TFN ++D L K GKM
Sbjct: 230 IVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKM 289
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
A +L +M++ ++P+ YN+L+DG+ +V AK +F SM G T V +Y+ +
Sbjct: 290 KAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTM 349
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I+G CK K ++ A+SL+ EM K + PD+V Y +L L + H +ERA L +M+ G+
Sbjct: 350 IDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGI 409
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D ++Y +D LCK + A E F+ L + L+++ YN +I+GL
Sbjct: 410 QPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGL 458
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/444 (29%), Positives = 221/444 (49%), Gaps = 44/444 (9%)
Query: 1 FCIFDYM---------LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPD 51
FCI ++ + ++ P VC+FN L L K + + + PD
Sbjct: 248 FCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPD 307
Query: 52 LYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 111
+ TYN LI+ + + +V + V + +S TPN T+T++I GLC E + EA +LF
Sbjct: 308 VVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFE 367
Query: 112 KLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EG 159
+++ P++ TY +LI+GL + H A+ L ++M + V G
Sbjct: 368 EMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGG 427
Query: 160 FVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 219
++ AKE F ++ + + +V TY +I G C A+ + EA L +M +G P+ +TF
Sbjct: 428 RLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFK 487
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIG-----------------------VRPNAFVYNTL 256
I+ L + + D+A ++L MI G ++P+ Y TL
Sbjct: 488 TIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTL 547
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
MDG+ L + AK +F SM MG T V Y+I+I+G CK K ++ A+SL+ EM K +
Sbjct: 548 MDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNM 607
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
P++V Y +L L + H +ERA L EM+ G+ D ++Y +DGLCK+ + A E
Sbjct: 608 FPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKE 667
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
+F+ L + L+++ Y +I+ L
Sbjct: 668 IFQRLLVKGYHLNVQVYTAMINEL 691
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 172/351 (49%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++ L L KN H + ++L K++ G+ PD+Y+Y IL++ CK GR+ +
Sbjct: 376 PDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEF 435
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R+L + N T+ +I GLC EA L +K+ GC P+ T+ T+I L+
Sbjct: 436 FQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFE 495
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
A + EM + + + + +AK + M I PDVVTY +++ G+ N
Sbjct: 496 KDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVN 555
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ AK + M GV PNV + +++D LCK +DEA L + M + PN Y
Sbjct: 556 ELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYT 615
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L+D C + RA L M+ G V+SY+IL++G CK+ +EGA ++ +L K
Sbjct: 616 SLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVK 675
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
G +V +Y + L + + A L +M+ G D T+ I L
Sbjct: 676 GYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWAL 726
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 177/388 (45%), Gaps = 4/388 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L K K D +SLF+ + + PD+ TY LI+ CK + +
Sbjct: 341 PNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIAL 400
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ P+ ++T L+ LC R+ A F +L V G NV TYN +INGL +
Sbjct: 401 CKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCK 460
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
A++L +M G G + K L KDEN + + + RG A
Sbjct: 461 ADLFGEAMDLKSKM-EGKGCMP-DAITFKTIICALFEKDENDKAEKILREMIARGLQEAR 518
Query: 195 D--WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
EAK +L M ++P+VVT+ +MD ++ A + M Q+GV PN
Sbjct: 519 KVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQC 578
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
Y ++DG C V+ A LF M+ + +Y+ LI+ CKN +E A++L EM
Sbjct: 579 YTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMK 638
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
GI+PDV Y L L + ++E A ++F + G + Y I+ LCK
Sbjct: 639 EHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFD 698
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
EA++L + C D ++ +I L
Sbjct: 699 EALDLQXKMEDKGCMPDAVTFDIIIWAL 726
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/409 (37%), Positives = 235/409 (57%), Gaps = 13/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML MR + P + F + G L K KH+ T +SL K++ G+ PDL T +ILINCFC
Sbjct: 120 FNGMLLMR-NTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFC 178
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+G+++ F VLG+IL+ + PN + T+L+KGLC + + ++ K+ G + N
Sbjct: 179 HLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQV 238
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
+Y TL+NGL + G T A+ L + + V + V++A + + +M
Sbjct: 239 SYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEM 298
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
I PDV+TY+++I GFC A A LL EM + + P+V T+ +++D LCK GK+
Sbjct: 299 NSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKL 358
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA LL +M + GV+PN Y+TLMDG+CL G V+ AK++F +M +V SY+I+
Sbjct: 359 KEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIM 418
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
ING CK K ++ A++L EML K + P+ V YN+L L + ++ A L E+ G
Sbjct: 419 INGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQ 478
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
AD TY + +DGLCKN + +A+ LF ++ + + Y LIDGL
Sbjct: 479 PADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGL 527
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 181/357 (50%), Gaps = 12/357 (3%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ R + P V +N + L K+K + + +NS G+FPD+ TY+ LI FC G
Sbjct: 262 MIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAG 321
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
++ F +L + P+ T+T LI LC E ++ EA L + G +PNV TY+
Sbjct: 322 QLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYS 381
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDE 174
TL++G G A +F M V + VD+A L +M +
Sbjct: 382 TLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHK 441
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
N+ P+ VTY S+I G C + A L+ E+ +G +V+T+ ++D LCKN +D+A
Sbjct: 442 NVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKA 501
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
L M + G++PN + Y L+DG C R+ A++LF + GC V++Y+++I G
Sbjct: 502 IALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGG 561
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
CK ++ AL++ +M G PD V + + LFE + ++A KL EM G+
Sbjct: 562 LCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 618
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 189/376 (50%), Gaps = 12/376 (3%)
Query: 37 LSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 96
L ++ + G + +Y L+N CK+G +L I P+ V + ++I G
Sbjct: 222 LHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDG 281
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG 156
LC + + EA +T++ G P+V TY+TLI G G + A +L EM N
Sbjct: 282 LCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPD 341
Query: 157 V------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
V EG + +AK L M E + P+VVTY++++ G+C + + AK +
Sbjct: 342 VYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFH 401
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
M+ V P+V ++N++++ LCK +DEA LL M+ V PN YN+L+DG C +G
Sbjct: 402 AMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSG 461
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
R+ A +L + G V +Y+ L++G CKN+ ++ A++L+ +M +GI+P+ Y
Sbjct: 462 RITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYT 521
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
L L + +++ A KLF + G D +TY I GLCK + EA+ + +
Sbjct: 522 ALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDN 581
Query: 385 KCELDIRAYNCLIDGL 400
C D + +I L
Sbjct: 582 GCIPDAVTFEIIIRSL 597
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 186/383 (48%), Gaps = 28/383 (7%)
Query: 45 STGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG--LCA--E 100
+ G+ P+L T +ILINC +G+++ F VLG+IL+ + PN++T T+L+KG CA
Sbjct: 4 AKGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETRCAIKL 63
Query: 101 SRIME----------AAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV--ALNLFEEM 148
R++E +++L + F T+ + + H +V A++ F M
Sbjct: 64 PRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQFNGM 123
Query: 149 -----ASGNGEFG-VEGFVDKAKE------LFLQMKDENINPDVVTYTSVIRGFCYANDW 196
EFG + G + K K L QM+ + I PD+VT + +I FC+
Sbjct: 124 LLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQM 183
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+ +L +++ G QPN + +M LC G++ ++ D ++ G + N Y TL
Sbjct: 184 AFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTL 243
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
++G C G A +L +E V Y+ +I+G CK+K + A Y EM S+GI
Sbjct: 244 LNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGI 303
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
PDV+ Y+TL Q+ AF L +EM + D +TY ID LCK + EA
Sbjct: 304 FPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKN 363
Query: 377 LFRTLRILKCELDIRAYNCLIDG 399
L + + ++ Y+ L+DG
Sbjct: 364 LLGVMTKEGVKPNVVTYSTLMDG 386
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 135/281 (48%), Gaps = 12/281 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ IL L K +L + G+ P++ TY+ L++ +C +G V + +
Sbjct: 340 PDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQI 399
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++++ P+ ++ +I GLC + EA L ++ PN TYN+LI+GL +
Sbjct: 400 FHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCK 459
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
+G AL+L +E+ V + +DKA LF++MK+ I P+ T
Sbjct: 460 SGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYT 519
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT++I G C A+ L ++ +G +V T+NV++ LCK G +DEA + M
Sbjct: 520 YTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKME 579
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
G P+A + ++ ++A++L M + G H
Sbjct: 580 DNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLH 620
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 109/283 (38%), Gaps = 61/283 (21%)
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
+ I P++VT + +I + + +L +++ G QPN +T +M G+
Sbjct: 5 KGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLM-----KGETRC 59
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGF---------------------CLTGRVNRAKEL 272
A +L ++ RP ++ ++L + V+ A
Sbjct: 60 AIKLPRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQ 119
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL------ 326
F M M T ++ + ++ K K A+SL +M KGI+PD+V + L
Sbjct: 120 FNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCH 179
Query: 327 -------FVVLFEI----------------------HQVERAFKLFDEMQRDGVAADTWT 357
F VL +I +V+++ D++ G + +
Sbjct: 180 LGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVS 239
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Y T ++GLCK A++L R + D+ YN +IDGL
Sbjct: 240 YGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGL 282
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 158/445 (35%), Positives = 244/445 (54%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P + FN L +AK +D V+SL +R+ + + DLY+YNILINCF
Sbjct: 67 LFGEMVQSRP-LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCF 125
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF------ 116
C+ ++ VLG++++ + P+ VT +SL+ G C RI EA AL ++ V
Sbjct: 126 CRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNT 185
Query: 117 -----------------------------GCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
GC+P++FTY T++NGL + G +AL+L ++
Sbjct: 186 VTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK 245
Query: 148 MASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M G E V + V+ A LF +M ++ I P+VVTY S+IR C
Sbjct: 246 MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 305
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++A LL +M+++ + PNVVTF+ ++D K GK+ EA +L D MI+ + P+ F Y++
Sbjct: 306 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 365
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L++GFC+ R++ AK +F M S C V +Y+ LI G+CK K +E + L+ EM +G
Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 425
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ + V YNTL LF+ + A K+F +M DGV D TY +DGLCK + +A+
Sbjct: 426 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 485
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
+F L+ K E DI YN +I+G+
Sbjct: 486 VVFEYLQKSKMEPDIYTYNIMIEGM 510
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 186/366 (50%), Gaps = 23/366 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V + + L K+ + L+LF +++ G+ P++ TYN LI C C GR S +L
Sbjct: 255 VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 314
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ PN VTF++LI E +++EA L+ ++ +P++FTY++LING
Sbjct: 315 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING----- 369
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
F + +D+AK +F M ++ P+VVTY ++I+GFC A
Sbjct: 370 ------------------FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
E L EM +G+ N VT+N ++ L + G D A ++ M+ GV P+ Y+ L
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG C G++ +A +F ++ +++Y+I+I G CK ++E L+ + KG+
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 531
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
KP+V+IY T+ E A LF EM+ DG ++ TY T I ++ + E
Sbjct: 532 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAE 591
Query: 377 LFRTLR 382
L + +R
Sbjct: 592 LIKEMR 597
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 200/408 (49%), Gaps = 13/408 (3%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
+ D M M P V ++ G NK + V +L R+ + G PDL+TY ++N
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV-ALIDRMVARGCQPDLFTYGTVVNG 229
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK G + +L ++ + + V +T++I LC + +A LFT++ G PN
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFL 169
V TYN+LI L G A L +M F EG + +A++L+
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M +I+PD+ TY+S+I GFC + +EAK + M+ + PNVVT+N ++ CK
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+++E L M Q G+ N YNTL+ G G + A+++F M S G + +YS
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
IL++G CK ++E AL ++ + ++PD+ YN + + + +VE + LF +
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
GV + Y T I G C+ EA LFR ++ + YN LI
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%)
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
++A L EM+ P++V FN ++ + K K D L + M + + + + YN L
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
++ FC ++ A + M +G + + S L+NGYC K I A++L +M
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+P+ V +NTL LF ++ A L D M G D +TY T ++GLCK I A+
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
L + + K E D+ Y +ID L
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDAL 265
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 73/137 (53%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + +++IL L K + L +F+ L + + PD+YTYNI+I CK G+V G+
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ + PN + +T++I G C + EA ALF +++ G PN TYNTLI
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581
Query: 134 RTGHTIVALNLFEEMAS 150
R G + L +EM S
Sbjct: 582 RDGDKAASAELIKEMRS 598
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 116/237 (48%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A +LF +M P +V + ++ N ++ L M + + ++ ++N+
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C+ ++ A +L M+++G P+ ++L++G+C R++ A L M M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
+++ LI+G + + A++L M+++G +PD+ Y T+ L + ++ A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
L +M++ + AD Y T ID LC + +A+ LF + ++ YN LI
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 158/445 (35%), Positives = 244/445 (54%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P + FN L +AK +D V+SL +R+ + + DLY+YNILINCF
Sbjct: 51 LFGEMVQSRPLPS-IVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCF 109
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF------ 116
C+ ++ VLG++++ + P+ VT +SL+ G C RI EA AL ++ V
Sbjct: 110 CRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNT 169
Query: 117 -----------------------------GCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
GC+P++FTY T++NGL + G +AL+L ++
Sbjct: 170 VTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK 229
Query: 148 MASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M G E V + V+ A LF +M ++ I P+VVTY S+IR C
Sbjct: 230 MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 289
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++A LL +M+++ + PNVVTF+ ++D K GK+ EA +L D MI+ + P+ F Y++
Sbjct: 290 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 349
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L++GFC+ R++ AK +F M S C V +Y+ LI G+CK K +E + L+ EM +G
Sbjct: 350 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 409
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ + V YNTL LF+ + A K+F +M DGV D TY +DGLCK + +A+
Sbjct: 410 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 469
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
+F L+ K E DI YN +I+G+
Sbjct: 470 VVFEYLQKSKMEPDIYTYNIMIEGM 494
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 186/366 (50%), Gaps = 23/366 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V + + L K+ + L+LF +++ G+ P++ TYN LI C C GR S +L
Sbjct: 239 VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 298
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ PN VTF++LI E +++EA L+ ++ +P++FTY++LING
Sbjct: 299 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING----- 353
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
F + +D+AK +F M ++ P+VVTY ++I+GFC A
Sbjct: 354 ------------------FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 395
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
E L EM +G+ N VT+N ++ L + G D A ++ M+ GV P+ Y+ L
Sbjct: 396 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 455
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG C G++ +A +F ++ +++Y+I+I G CK ++E L+ + KG+
Sbjct: 456 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 515
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
KP+V+IY T+ E A LF EM+ DG ++ TY T I ++ + E
Sbjct: 516 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAE 575
Query: 377 LFRTLR 382
L + +R
Sbjct: 576 LIKEMR 581
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 200/408 (49%), Gaps = 13/408 (3%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
+ D M M P V ++ G NK + V +L R+ + G PDL+TY ++N
Sbjct: 155 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV-ALIDRMVARGCQPDLFTYGTVVNG 213
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK G + +L ++ + + V +T++I LC + +A LFT++ G PN
Sbjct: 214 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 273
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFL 169
V TYN+LI L G A L +M F EG + +A++L+
Sbjct: 274 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 333
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M +I+PD+ TY+S+I GFC + +EAK + M+ + PNVVT+N ++ CK
Sbjct: 334 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 393
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+++E L M Q G+ N YNTL+ G G + A+++F M S G + +YS
Sbjct: 394 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 453
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
IL++G CK ++E AL ++ + ++PD+ YN + + + +VE + LF +
Sbjct: 454 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 513
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
GV + Y T I G C+ EA LFR ++ + YN LI
Sbjct: 514 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 561
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%)
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
++A L EM+ P++V FN ++ + K K D L + M + + + + YN L
Sbjct: 46 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 105
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
++ FC ++ A + M +G + + S L+NGYC K I A++L +M
Sbjct: 106 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 165
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+P+ V +NTL LF ++ A L D M G D +TY T ++GLCK I A+
Sbjct: 166 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 225
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
L + + K E D+ Y +ID L
Sbjct: 226 LLKKMEKGKIEADVVIYTTIIDAL 249
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 73/137 (53%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + +++IL L K + L +F+ L + + PD+YTYNI+I CK G+V G+
Sbjct: 446 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 505
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ + PN + +T++I G C + EA ALF +++ G PN TYNTLI
Sbjct: 506 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 565
Query: 134 RTGHTIVALNLFEEMAS 150
R G + L +EM S
Sbjct: 566 RDGDKAASAELIKEMRS 582
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 116/237 (48%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A +LF +M P +V + ++ N ++ L M + + ++ ++N+
Sbjct: 45 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 104
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C+ ++ A +L M+++G P+ ++L++G+C R++ A L M M
Sbjct: 105 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 164
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
+++ LI+G + + A++L M+++G +PD+ Y T+ L + ++ A
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
L +M++ + AD Y T ID LC + +A+ LF + ++ YN LI
Sbjct: 225 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 281
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/445 (35%), Positives = 241/445 (54%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P + FN L +AK K +D V+SL +++ + LYTYNILINCF
Sbjct: 34 LFGGMVKSRP-LPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCF 92
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM------------------ 104
C+ ++S +LG++++ + P+ VT +SL+ G C RI
Sbjct: 93 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 152
Query: 105 -----------------EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
EA AL ++ GC+PN+ TY ++NGL + G T +ALNL +
Sbjct: 153 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNK 212
Query: 148 MASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M + E V F VD A LF +M+ + I P+VVTY+S+I C
Sbjct: 213 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 272
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++A LL +M+++ + PN+VTFN ++D K GK EA +L D MI+ + P+ F YN+
Sbjct: 273 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 332
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L++GFC+ R+++AK++F M S C V +Y+ LI G+CK+K +E L+ EM +G
Sbjct: 333 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 392
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ D V Y TL LF + A K+F +M DGV D TY +DGLC N + +A+
Sbjct: 393 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 452
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
E+F ++ + +LDI Y +I+G+
Sbjct: 453 EVFDYMQKSEIKLDIYIYTTMIEGM 477
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 187/366 (51%), Gaps = 23/366 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V FN + L K +H D L+LFK + + G+ P++ TY+ LI+C C GR S +L
Sbjct: 222 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 281
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ PN VTF +LI E + +EA L+ + +P++FTYN+L+NG
Sbjct: 282 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNG----- 336
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
F + +DKAK++F M ++ PDVVTY ++I+GFC +
Sbjct: 337 ------------------FCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 378
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+ L EM +G+ + VT+ ++ L +G D A ++ M+ GV P+ Y+ L
Sbjct: 379 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 438
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG C G++ +A E+F M+ ++ Y+ +I G CK +++ L+ + KG+
Sbjct: 439 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 498
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
KP+VV YNT+ L ++ A+ L +M+ DG ++ TY T I ++ + E
Sbjct: 499 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAE 558
Query: 377 LFRTLR 382
L R +R
Sbjct: 559 LIREMR 564
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 127/276 (46%), Gaps = 24/276 (8%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
++D M+ R P + ++N L + D +F+ + S FPD+ TYN LI F
Sbjct: 314 LYDDMIK-RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 372
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK RV G + + + VT+T+LI+GL + A +F ++ G P++
Sbjct: 373 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 432
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TY+ L++GL G ++KA E+F M+ I D+
Sbjct: 433 MTYSILLDGLCNNGK-----------------------LEKALEVFDYMQKSEIKLDIYI 469
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT++I G C A ++ L + +GV+PNVVT+N ++ LC + EA LL M
Sbjct: 470 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 529
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
+ G PN+ YNTL+ G + EL M S
Sbjct: 530 EDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 565
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%)
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++R + ++A L M+ P++V FN ++ + K K D L + M
Sbjct: 15 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 74
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
++ + + YN L++ FC +++ A L M +G ++ + S L+NGYC K I
Sbjct: 75 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 134
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A++L +M+ G +PD + + TL LF ++ A L D M + G + TY +
Sbjct: 135 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 194
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+GLCK A+ L + K E D+ +N +ID L
Sbjct: 195 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 232
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 123/256 (48%), Gaps = 7/256 (2%)
Query: 149 ASGNGEF------GVEGF-VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
+SG+G++ G+ +D A LF M P +V + ++ ++
Sbjct: 9 SSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVIS 68
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
L +M + + T+N++++ C+ ++ A LL M+++G P+ ++L++G+C
Sbjct: 69 LGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC 128
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
R++ A L M MG +++ LI+G + + A++L M+ +G +P++V
Sbjct: 129 HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 188
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
Y + L + + A L ++M+ + AD + T ID LCK ++ +A+ LF+ +
Sbjct: 189 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 248
Query: 382 RILKCELDIRAYNCLI 397
++ Y+ LI
Sbjct: 249 ETKGIRPNVVTYSSLI 264
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/445 (35%), Positives = 241/445 (54%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P + FN L +AK K +D V+SL +++ + LYTYNILINCF
Sbjct: 72 LFGGMVKSRP-LPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCF 130
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM------------------ 104
C+ ++S +LG++++ + P+ VT +SL+ G C RI
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190
Query: 105 -----------------EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
EA AL ++ GC+PN+ TY ++NGL + G T +ALNL +
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNK 250
Query: 148 MASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M + E V F VD A LF +M+ + I P+VVTY+S+I C
Sbjct: 251 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 310
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++A LL +M+++ + PN+VTFN ++D K GK EA +L D MI+ + P+ F YN+
Sbjct: 311 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 370
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L++GFC+ R+++AK++F M S C V +Y+ LI G+CK+K +E L+ EM +G
Sbjct: 371 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 430
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ D V Y TL LF + A K+F +M DGV D TY +DGLC N + +A+
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
E+F ++ + +LDI Y +I+G+
Sbjct: 491 EVFDYMQKSEIKLDIYIYTTMIEGM 515
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 187/366 (51%), Gaps = 23/366 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V FN + L K +H D L+LFK + + G+ P++ TY+ LI+C C GR S +L
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ PN VTF +LI E + +EA L+ + +P++FTYN+L+NG
Sbjct: 320 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNG----- 374
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
F + +DKAK++F M ++ PDVVTY ++I+GFC +
Sbjct: 375 ------------------FCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 416
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+ L EM +G+ + VT+ ++ L +G D A ++ M+ GV P+ Y+ L
Sbjct: 417 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 476
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG C G++ +A E+F M+ ++ Y+ +I G CK +++ L+ + KG+
Sbjct: 477 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 536
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
KP+VV YNT+ L ++ A+ L +M+ DG ++ TY T I ++ + E
Sbjct: 537 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAE 596
Query: 377 LFRTLR 382
L R +R
Sbjct: 597 LIREMR 602
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 127/276 (46%), Gaps = 24/276 (8%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
++D M+ R P + ++N L + D +F+ + S FPD+ TYN LI F
Sbjct: 352 LYDDMIK-RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK RV G + + + VT+T+LI+GL + A +F ++ G P++
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TY+ L++GL G ++KA E+F M+ I D+
Sbjct: 471 MTYSILLDGLCNNGK-----------------------LEKALEVFDYMQKSEIKLDIYI 507
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT++I G C A ++ L + +GV+PNVVT+N ++ LC + EA LL M
Sbjct: 508 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 567
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
+ G PN+ YNTL+ G + EL M S
Sbjct: 568 EDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%)
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++R + ++A L M+ P++V FN ++ + K K D L + M
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
++ + + YN L++ FC +++ A L M +G ++ + S L+NGYC K I
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A++L +M+ G +PD + + TL LF ++ A L D M + G + TY +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+GLCK A+ L + K E D+ +N +ID L
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 270
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 123/256 (48%), Gaps = 7/256 (2%)
Query: 149 ASGNGEF------GVEGF-VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
+SG+G++ G+ +D A LF M P +V + ++ ++
Sbjct: 47 SSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVIS 106
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
L +M + + T+N++++ C+ ++ A LL M+++G P+ ++L++G+C
Sbjct: 107 LGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC 166
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
R++ A L M MG +++ LI+G + + A++L M+ +G +P++V
Sbjct: 167 HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 226
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
Y + L + + A L ++M+ + AD + T ID LCK ++ +A+ LF+ +
Sbjct: 227 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286
Query: 382 RILKCELDIRAYNCLI 397
++ Y+ LI
Sbjct: 287 ETKGIRPNVVTYSSLI 302
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/411 (38%), Positives = 233/411 (56%), Gaps = 14/411 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ M+P P V F+ LF + KHY V+SLF+ + G+ NI+ N +
Sbjct: 49 LFHRMVRMKPLPS-VIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVTNSY 107
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPN 121
C R+ F VL L++ N VTF +L+ GL AE+++ +A LF KL R CEPN
Sbjct: 108 CLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPN 167
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFL 169
Y T++NGL + GHT L+L M GN + V + +D A L
Sbjct: 168 EVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLN 227
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+MK +NI P++ TY S+I G C W + K LL EM++ + PNV TF++++D LCK G
Sbjct: 228 EMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEG 287
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+++A ++ MI+ GV P+ Y+ +MDG+CL G+V+RA+ +F + G +FSYS
Sbjct: 288 KVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYS 347
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
ILINGYCK K + A+ L+GE+ KG+KPD V Y+T+ L E+ ++ A K+FDEM R
Sbjct: 348 ILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRV 407
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G D + T + G K + EA+ LF L + + +I Y +I+GL
Sbjct: 408 GPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGL 458
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 185/398 (46%), Gaps = 58/398 (14%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
+ P V +++I+ L K+ + D ++L + + P+++TYN LI+ CK+G+
Sbjct: 199 TKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVK 258
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+L ++ PN TF+ LI GLC E ++ +A + + G EP++ TY+ +++G
Sbjct: 259 TLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDG- 317
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ + G VD+A+ +F ++D+ I P++ +Y+ +I G+C
Sbjct: 318 ----------------------YCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCK 355
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
+ +A L E+ +G++P+ VT++ I+ L + G++ +A ++ D M+++G P+ +
Sbjct: 356 KKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICL 415
Query: 253 YNTLM-----------------------------------DGFCLTGRVNRAKELFVSME 277
++TL+ +G C RV A +F +
Sbjct: 416 HSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLP 475
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
S+G V +Y+++I G+C+ + + +M G + + YN + F +++
Sbjct: 476 SIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKIS 535
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
EM G + D T I+ L +N IV+ +
Sbjct: 536 EIVSFMKEMAGRGFSFDATTTGVLINVLKENPSIVDMI 573
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 159/345 (46%), Gaps = 50/345 (14%)
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM---------------- 148
+A +LF ++ P+V ++ L + H ++LF EM
Sbjct: 45 DAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVT 104
Query: 149 ----------------------------ASGNGEFG---VEGFVDKAKELFLQMKDENI- 176
+ N G E V A LF ++ E I
Sbjct: 105 NSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKIC 164
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEAS 235
P+ V Y +V+ G E L+ +M+QG +P+V T+++++D LCK+ +D A
Sbjct: 165 EPNEVMYGTVMNGLS-KRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAI 223
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
LL+ M Q + PN F YN+L+DG C G+ + K L M ++ V ++SILI+G
Sbjct: 224 NLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGL 283
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
CK ++E A + M+ KG++PD++ Y+ + QV+RA ++F+ ++ G+ +
Sbjct: 284 CKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNI 343
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++Y I+G CK + +A++LF + + D Y+ ++ GL
Sbjct: 344 FSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGL 388
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 114/275 (41%), Gaps = 36/275 (13%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A LF +M P V+ ++ + + ++ L EM G+ + N+
Sbjct: 43 LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL------------------------ 256
+ + C ++D A +L + ++ G+ N +NTL
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162
Query: 257 ------------MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
M+G G + L ME V +YSI+I+ CK+ ++ A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
++L EM K I P++ YN+L L ++ Q E+ L EM + + T+ IDG
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDG 282
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
LCK + +A E+ R + E DI Y+ ++DG
Sbjct: 283 LCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDG 317
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 1/171 (0%)
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+D+A L M+++ P+ ++ L + LF M +G + +I
Sbjct: 43 LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+ N YC I+ A S+ L GI +VV +NTL LF ++V A LF ++ R+
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162
Query: 351 V-AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + Y T ++GL K + + + L R + + D+R Y+ +ID L
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDAL 213
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 144/410 (35%), Positives = 234/410 (57%), Gaps = 13/410 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P V F+ F +A+ K ++ VL K+L G+ ++YT NI+INCF
Sbjct: 75 LFQEMIRSRPLPSLV-DFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCF 133
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ + + VLG++++ + P+ TF +LIKGL E ++ EA L ++ GC+P+V
Sbjct: 134 CRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDV 193
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
TYN+++NG+ R+G T +AL+L +M N + V +G +D A LF +
Sbjct: 194 VTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE 253
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M+ + I VVTY S++RG C A WN+ LL +M+ + + PNV+TFNV++D K GK
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ EA+ L MI G+ PN YNTLMDG+C+ R++ A + M C+ + +++
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI GYC K ++ + ++ + +G+ + V Y+ L + +++ A +LF EM G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
V D TY +DGLC N + +A+E+F L+ K +L I Y +I+G+
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 188/390 (48%), Gaps = 23/390 (5%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R V +++ + L ++ D +SLFK + + G+ + TYN L+ CK G+ +
Sbjct: 222 RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWND 281
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
G ++L ++ PN +TF L+ E ++ EA L+ ++ G PN+ TYNTL++
Sbjct: 282 GALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
G + ++ + +A + M +PD+VT+TS+I+G+
Sbjct: 342 G-----------------------YCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 378
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C ++ + + +G+ N VT+++++ C++GK+ A L M+ GV P+
Sbjct: 379 CMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDV 438
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
Y L+DG C G++ +A E+F ++ + Y+ +I G CK ++E A +L+
Sbjct: 439 MTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCS 498
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
+ KG+KP+V+ Y + L + + A L +M+ DG A + TY T I ++
Sbjct: 499 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGD 558
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + +L ++ D + +ID L
Sbjct: 559 LTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 122/261 (46%), Gaps = 7/261 (2%)
Query: 145 FEEMASGN---GEFGVEGFVDKAKE----LFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
F +++GN E G VD K+ LF +M P +V ++ +N
Sbjct: 46 FSSISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFN 105
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
++ G+ N+ T N++++ C+ K A +L ++++G P+ +NTL+
Sbjct: 106 LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLI 165
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
G L G+V+ A L M GC V +Y+ ++NG C++ + AL L +M + +K
Sbjct: 166 KGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVK 225
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
DV Y+T+ L ++ A LF EM+ G+ + TY + + GLCK + L
Sbjct: 226 ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALL 285
Query: 378 FRTLRILKCELDIRAYNCLID 398
+ + + ++ +N L+D
Sbjct: 286 LKDMVSREIVPNVITFNVLLD 306
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 4/186 (2%)
Query: 219 NVIMDELCKNG----KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
NV E ++G K D+A L MI+ P+ ++ T + N +
Sbjct: 53 NVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCK 112
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
+E G H +++ +I+IN +C+ + A S+ G+++ G +PD +NTL LF
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
+V A L D M +G D TY + ++G+C++ A++L R + + D+ Y+
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232
Query: 395 CLIDGL 400
+ID L
Sbjct: 233 TIIDSL 238
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 145/410 (35%), Positives = 234/410 (57%), Gaps = 13/410 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P V F+ F +A K ++ VL K++ G+ ++YT NI+INCF
Sbjct: 52 LFQEMIRSRPLPSLV-DFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCF 110
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ + + VLG++++ + P+ TF +LI GLC ES++ EA L ++ GC+PNV
Sbjct: 111 CRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNV 170
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
TYN+++NG+ ++G T +AL+L +M N + V +G +D A LF +
Sbjct: 171 VTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE 230
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M+ + I +VTY S++ G C A WN+ LL +M + + PNV+TFNV++D K GK
Sbjct: 231 METKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGK 290
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ EA+ L MI G+ PN YN+LMDG+C+ R++ A + M C+ + +++
Sbjct: 291 LQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTS 350
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI GYCK K ++ + L+ ++ +G+ + V Y+ L + ++E A +LF EM G
Sbjct: 351 LIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLG 410
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
V D TY +DGLC N + +A+E+F L+ K LDI Y +I+G+
Sbjct: 411 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGM 460
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 191/393 (48%), Gaps = 23/393 (5%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
++ R V +++ + L ++ D +SLFK + + G+ L TYN L+ CK G+
Sbjct: 196 MDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGK 255
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ G +L + PN +TF LI E ++ EA L+ ++ G PN TYN+
Sbjct: 256 WNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNS 315
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
L++G + ++ + +A + M N +PD+VT+TS+I
Sbjct: 316 LMDG-----------------------YCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLI 352
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
+G+C +E L ++ +G+ N VT+++++ C++GK++ A L M+ +GV
Sbjct: 353 KGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVL 412
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P+ Y L+DG C G++ +A E+F ++ + Y+I+I G CK ++E A +L
Sbjct: 413 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNL 472
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
+ + KG+KP+V+ Y + L + + A L +M+ DG + TY T I +
Sbjct: 473 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLR 532
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + + +L ++ D + +ID L
Sbjct: 533 DGDLTASAKLIEEMKSCGFSADASSIKMVIDML 565
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 117/237 (49%)
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
D A +LF +M P +V ++ G +N +M G+ N+ T N++
Sbjct: 47 DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
++ C+ K A +L ++++G P+ +NTL++G CL +V+ A L M GC
Sbjct: 107 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGC 166
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
V +Y+ ++NG CK+ + AL L +M + +K DV Y+T+ L ++ A
Sbjct: 167 QPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAIS 226
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
LF EM+ G+ + TY + + GLCK + V+L + + K ++ +N LID
Sbjct: 227 LFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLID 283
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%)
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K D+A L MI+ P+ ++ G T + N + ME G H +++ +
Sbjct: 45 KEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLN 104
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
I+IN +C+ + A S+ G+++ G +PD +NTL L +V A L M +
Sbjct: 105 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVEN 164
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G + TY + ++G+CK+ A++L R + + D+ Y+ +ID L
Sbjct: 165 GCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSL 215
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 144/410 (35%), Positives = 234/410 (57%), Gaps = 13/410 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P V F+ F +A+ K ++ VL K+L G+ ++YT NI+INCF
Sbjct: 75 LFQEMIRSRPLPSLV-DFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCF 133
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ + + VLG++++ + P+ TF +LIKGL E ++ EA L ++ GC+P+V
Sbjct: 134 CRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDV 193
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
TYN+++NG+ R+G T +AL+L +M N + V +G +D A LF +
Sbjct: 194 VTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE 253
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M+ + I VVTY S++RG C A WN+ LL +M+ + + PNV+TFNV++D K GK
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ EA+ L MI G+ PN YNTLMDG+C+ R++ A + M C+ + +++
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI GYC K ++ + ++ + +G+ + V Y+ L + +++ A +LF EM G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
V D TY +DGLC N + +A+E+F L+ K +L I Y +I+G+
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 188/390 (48%), Gaps = 23/390 (5%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R V +++ + L ++ D +SLFK + + G+ + TYN L+ CK G+ +
Sbjct: 222 RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWND 281
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
G ++L ++ PN +TF L+ E ++ EA L+ ++ G PN+ TYNTL++
Sbjct: 282 GALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
G + ++ + +A + M +PD+VT+TS+I+G+
Sbjct: 342 G-----------------------YCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 378
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C ++ + + +G+ N VT+++++ C++GK+ A L M+ GV P+
Sbjct: 379 CMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDV 438
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
Y L+DG C G++ +A E+F ++ + Y+ +I G CK ++E A +L+
Sbjct: 439 MTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCS 498
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
+ KG+KP+V+ Y + L + + A L +M+ DG A + TY T I ++
Sbjct: 499 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGD 558
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + +L ++ D + +ID L
Sbjct: 559 LTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 112/237 (47%)
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
D A LF +M P +V ++ +N ++ G+ N+ T N++
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
++ C+ K A +L ++++G P+ +NTL+ G L G+V+ A L M GC
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
V +Y+ ++NG C++ + AL L +M + +K DV Y+T+ L ++ A
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
LF EM+ G+ + TY + + GLCK + L + + + ++ +N L+D
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 4/186 (2%)
Query: 219 NVIMDELCKNG----KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
NV E ++G K D+A L MI+ P+ ++ T + N +
Sbjct: 53 NVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCK 112
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
+E G H +++ +I+IN +C+ + A S+ G+++ G +PD +NTL LF
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
+V A L D M +G D TY + ++G+C++ A++L R + + D+ Y+
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232
Query: 395 CLIDGL 400
+ID L
Sbjct: 233 TIIDSL 238
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 144/412 (34%), Positives = 234/412 (56%), Gaps = 13/412 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+F M+ RP P V F+ F +A+ K ++ VL K+L G+ ++YT NI+IN
Sbjct: 63 IALFQEMIRSRPLPSLV-DFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 121
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CFC+ + + VLG++++ + P+ TF +LIKGL E ++ EA L ++ GC+P
Sbjct: 122 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 181
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELF 168
+V TYN+++NG+ R+G T +AL+L +M N + V +G +D A LF
Sbjct: 182 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 241
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+M+ + I VVTY S++RG C A WN+ LL +M+ + + PNV+TFNV++D K
Sbjct: 242 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 301
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
GK+ EA+ L MI G+ PN YNTLMDG+C+ R++ A + M C+ + ++
Sbjct: 302 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 361
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ LI GYC K ++ + ++ + +G+ + V Y+ L + +++ A +LF EM
Sbjct: 362 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 421
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GV D TY +DGLC N + +A+E+F L+ K +L I Y +I+G+
Sbjct: 422 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 473
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 187/384 (48%), Gaps = 23/384 (5%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +++ + L ++ D +SLFK + + G+ + TYN L+ CK G+ + G ++L
Sbjct: 218 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 277
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ PN +TF L+ E ++ EA L+ ++ G PN+ TYNTL++G
Sbjct: 278 DMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG----- 332
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+ ++ + +A + M +PD+VT+TS+I+G+C
Sbjct: 333 ------------------YCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 374
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
++ + + +G+ N VT+++++ C++GK+ A L M+ GV P+ Y L
Sbjct: 375 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 434
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG C G++ +A E+F ++ + Y+ +I G CK ++E A +L+ + KG+
Sbjct: 435 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 494
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
KP+V+ Y + L + + A L +M+ DG A + TY T I ++ + + +
Sbjct: 495 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAK 554
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
L ++ D + +ID L
Sbjct: 555 LIEEMKSCGFSADASSIKMVIDML 578
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 112/237 (47%)
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
D A LF +M P +V ++ +N ++ G+ N+ T N++
Sbjct: 60 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
++ C+ K A +L ++++G P+ +NTL+ G L G+V+ A L M GC
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 179
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
V +Y+ ++NG C++ + AL L +M + +K DV Y+T+ L ++ A
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 239
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
LF EM+ G+ + TY + + GLCK + L + + + ++ +N L+D
Sbjct: 240 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 296
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 4/186 (2%)
Query: 219 NVIMDELCKNG----KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
NV E ++G K D+A L MI+ P+ ++ T + N +
Sbjct: 43 NVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCK 102
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
+E G H +++ +I+IN +C+ + A S+ G+++ G +PD +NTL LF
Sbjct: 103 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 162
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
+V A L D M +G D TY + ++G+C++ A++L R + + D+ Y+
Sbjct: 163 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 222
Query: 395 CLIDGL 400
+ID L
Sbjct: 223 TIIDSL 228
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 122/302 (40%), Gaps = 23/302 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ ++ L K L +++ G P+ TYN LI + G ++ +
Sbjct: 496 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 555
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK--------LRVFGCEPNVFTYN 126
+ + F+ +A + +I L + + + +K L + G E +
Sbjct: 556 IEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKIRLSSL 615
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
T + ++ +LN+ A G + + K + + K +N + V+ +
Sbjct: 616 TFVK-MFPCNTITTSLNVNTIEARGMNSAELNRDLRKLRRSSVLKKFKNRDVRVLVTNEL 674
Query: 187 IRGFCYANDW--NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK---MDEASRLLDLM 241
+ W +A+C L M+D + + V + + + G+ + A L M
Sbjct: 675 L-------TWGLEDAECDL--MVDLELPTDAVHYAHRAGRMRRPGRKMTVVTAEELHKEM 725
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
IQ G+ PN Y++L+DGFC R++ A ++ M + G + + + L+ K E
Sbjct: 726 IQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKGDSDIRYLLAGLMRKKRKGSET 785
Query: 302 EG 303
EG
Sbjct: 786 EG 787
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 280 bits (717), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 148/410 (36%), Positives = 231/410 (56%), Gaps = 13/410 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ +L P+PP + F + G L K+KHY TVLSLF+++ G+ P+ +NILINCF
Sbjct: 57 LFNCLLRQNPTPPDM-EFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCF 115
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C++G + F VL +IL+ + P+ +T + IKG C + +I +A KL G +
Sbjct: 116 CQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQ 175
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQ 170
+Y TLINGL + G T AL L + + V + V+ A +L+ +
Sbjct: 176 VSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSE 235
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M I+ ++VTY+++I GFC +A L +M + + P+V TFN+++D CK G+
Sbjct: 236 MVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGR 295
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ EA L +M++ G++P+ YN+LMDG+CL VN AK + +M G T TV SY+I
Sbjct: 296 VKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNI 355
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+ING+CK K ++ A+ L+ EM K I P+V+ YN+L L + ++ A +L D M G
Sbjct: 356 VINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRG 415
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D TY + +D LCKN + +A+ L L+ ++ Y LIDGL
Sbjct: 416 QQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGL 465
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 179/351 (50%), Gaps = 24/351 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F ++ M++ R S V ++ G K D + LF ++ S + PD+YT+NIL++
Sbjct: 230 FDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAI-GLFNKMTSENINPDVYTFNILVD 288
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
FCK GRV L +++ P+ VT+ SL+ G C + + A ++ + G
Sbjct: 289 AFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTA 348
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
V +YN +ING + VD+A +LF +M + I P+V
Sbjct: 349 TVRSYNIVINGFCKIK-----------------------MVDQAMKLFKEMHHKQIFPNV 385
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+TY S+I G C + + A L+ M D+G QP+++T++ I+D LCKN +D+A LL
Sbjct: 386 ITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIK 445
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+ G+RPN + Y L+DG C GR+ A+ +F + G TV +Y+++I G+C +
Sbjct: 446 LKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGL 505
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
+ ALSL +M PD + Y + LF+ + ++A KL EM G+
Sbjct: 506 FDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGL 556
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 195/410 (47%), Gaps = 15/410 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFG-CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILI 59
F + +L M P + + G CL H L+ +L + G D +Y LI
Sbjct: 125 FSVLAKILKMGYEPDTITLNTFIKGFCLKGQIH--QALNFHDKLVALGFHLDQVSYGTLI 182
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 119
N CK+G +L R+ + V ++++I +C + + +A L++++
Sbjct: 183 NGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRIS 242
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKEL 167
N+ TY+ LI+G G A+ LF +M S N F EG V +AK
Sbjct: 243 SNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNG 302
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
M + I PD+VTY S++ G+C N+ N AK +L M +GV V ++N++++ CK
Sbjct: 303 LAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCK 362
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
+D+A +L M + PN YN+L+DG C +GR++ A EL M G + +
Sbjct: 363 IKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIIT 422
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
YS +++ CKN ++ A++L ++ +GI+P++ Y L L + ++E A +F+++
Sbjct: 423 YSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLL 482
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
G TY I G C + EA+ L ++ C D Y +I
Sbjct: 483 VKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIII 532
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 175/392 (44%), Gaps = 58/392 (14%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
++ R V S+NI+ K K D + LFK ++ +FP++ TYN LI+ CK GR
Sbjct: 341 MSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGR 400
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+S+ ++ + P+ +T++S++ LC + +A AL KL+ G PN++TY
Sbjct: 401 ISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTI 460
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
LI+GL + G A N+FE++ V+G+ N V TYT +I
Sbjct: 461 LIDGLCKGGRLEDARNIFEDLL-------VKGY----------------NLTVNTYTVMI 497
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
+GFC ++EA LL +M D P+ +T+ +I+ L + D+A +LL MI G+
Sbjct: 498 QGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLL 557
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV----FSYSILINGYCKNKEIEG 303
+ Y + F A F++ +S+ CT + ++ +L YC
Sbjct: 558 YSFLEYGSWSLSFM------AAPAHFLNNDSLQCTSSQESGNWAKLLLERIYCD------ 605
Query: 304 ALSLYGEMLSKGIK-PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
+ M K ++ P V+IY+T + + G D TY I
Sbjct: 606 CVLTKSNMRDKDVECPSVIIYSTC------------------DWSKQGYILDVNTYTVMI 647
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
G C + E++ L + + C D Y+
Sbjct: 648 QGFCSHGLFDESLALLSKMEVNGCIPDAVTYD 679
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 157/345 (45%), Gaps = 47/345 (13%)
Query: 103 IMEAAALFT-----------------------------------KLRVFGCEPNVFTYNT 127
+++A +LF K+ G +PN +N
Sbjct: 51 VVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNI 110
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDEN 175
LIN + G A ++ ++ E F ++G + +A ++
Sbjct: 111 LINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALG 170
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+ D V+Y ++I G C + A LL + + VQ +VV ++ I+D +CK+ +++A
Sbjct: 171 FHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAF 230
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
L M+ + N Y+ L+ GFC+ G++ A LF M S V++++IL++ +
Sbjct: 231 DLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAF 290
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
CK ++ A + M+ +GIKPD+V YN+L +++V A + + M GV A
Sbjct: 291 CKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATV 350
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+Y I+G CK + +A++LF+ + + ++ YN LIDGL
Sbjct: 351 RSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGL 395
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 92/206 (44%)
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
ND +A L ++ Q P + F I+ L K+ L M G++PN +
Sbjct: 49 NDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNF 108
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N L++ FC G + A + + MG + + I G+C +I AL+ + ++++
Sbjct: 109 NILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVA 168
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
G D V Y TL L ++ + A +L + V D Y T ID +CK+ + +
Sbjct: 169 LGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVND 228
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
A +L+ + + +I Y+ LI G
Sbjct: 229 AFDLYSEMVSRRISSNIVTYSALISG 254
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%)
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
N + +A L + +++ P + ++ + + LF ME G +
Sbjct: 48 NNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVN 107
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
++ILIN +C+ I A S+ ++L G +PD + NT Q+ +A D++
Sbjct: 108 FNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLV 167
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G D +Y T I+GLCK A+EL R + +LD+ Y+ +ID +
Sbjct: 168 ALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSM 220
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 155/445 (34%), Positives = 239/445 (53%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P V FN LF +AK K Y+ VL+L K++ S G+ +YT +I+INCF
Sbjct: 75 LFRDMIQSRP-LPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCF 133
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ ++S+ F +G+I++ + P+ V F +L+ GLC E R+ EA L ++ G +P +
Sbjct: 134 CRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTL 193
Query: 123 FTYNTLINGLY-----------------------------------RTGHTIVALNLFEE 147
T NTL+NGL ++G T +A+ L +
Sbjct: 194 ITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 148 MASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M N + +G +D A LF +M+ + D++TY ++I GFC A
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++ LL +M+ + + PNVVTF+V++D K GK+ EA +LL M+Q G+ PN YN+
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNS 373
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L+DGFC R+ A ++ M S GC + +++ILINGYCK I+ L L+ EM +G
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRG 433
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ + V YNTL + ++E A KLF EM V D +Y+ +DGLC N + +A+
Sbjct: 434 VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKAL 493
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
E+F + K ELDI Y +I G+
Sbjct: 494 EIFGKIEKSKMELDIGIYMIIIHGM 518
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 195/407 (47%), Gaps = 13/407 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M+ M P + + N L L N + L R+ TG P+ TY ++N
Sbjct: 180 LVDRMVEM-GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM 238
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G+ + +L ++ +AV ++ +I GLC + + A LF ++ + G + ++
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 298
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
TYNTLI G G L +M F EG + +A +L +
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKE 358
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M I P+ +TY S+I GFC N EA ++ M+ +G P+++TFN++++ CK +
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+D+ L M GV N YNTL+ GFC +G++ AK+LF M S + SY I
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L++G C N E+E AL ++G++ ++ D+ IY + + +V+ A+ LF + G
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
V D Y I LC+ + +A LFR + D YN LI
Sbjct: 539 VKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILI 585
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 172/363 (47%), Gaps = 23/363 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
++I+ L K+ D +LF + G D+ TYN LI FC GR G +L ++
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+ +PN VTF+ LI E ++ EA L ++ G PN TYN+LI+G
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDG-------- 377
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
F E +++A ++ M + +PD++T+ +I G+C AN ++
Sbjct: 378 ---------------FCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDG 422
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
L EM +GV N VT+N ++ C++GK++ A +L M+ VRP+ Y L+DG
Sbjct: 423 LELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG 482
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
C G + +A E+F +E + Y I+I+G C +++ A L+ + KG+K D
Sbjct: 483 LCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLD 542
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
YN + L + +A LF +M +G A D TY I + A EL
Sbjct: 543 ARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIE 602
Query: 380 TLR 382
++
Sbjct: 603 EMK 605
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 121/249 (48%), Gaps = 2/249 (0%)
Query: 151 GNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG 210
+G G++ D A +LF M P V+ + + + L +M +G
Sbjct: 61 SSGLVGIKA--DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKG 118
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
+ ++ T +++++ C+ K+ A + ++++G P+ ++NTL++G CL RV+ A
Sbjct: 119 IAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEAL 178
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
EL M MG T+ + + L+NG C N ++ A+ L M+ G +P+ V Y + V+
Sbjct: 179 ELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM 238
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
+ Q A +L +M+ + D Y IDGLCK+ + A LF + I + DI
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 298
Query: 391 RAYNCLIDG 399
YN LI G
Sbjct: 299 ITYNTLIGG 307
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/441 (34%), Positives = 239/441 (54%), Gaps = 48/441 (10%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ RP P + FN L +AK K +D V+SL +++ G+ +LYTYNILINCFC+
Sbjct: 1 MVKSRP-LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRS 59
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM---------------------- 104
++S +LG++++ + P+ VT +SL+ G C RI
Sbjct: 60 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119
Query: 105 -------------EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG 151
EA AL ++ GC+PN+ TY ++NGL + G +A NL +M +
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Query: 152 NGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
E V F VD A LF +M+ + I P+VVTY+S+I C W++A
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 239
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
LL +M+++ + PN+VTFN ++D K GK EA +L D MI+ + P+ F YN+L++G
Sbjct: 240 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 299
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
FC+ R+++AK++F M S C + +Y+ LI G+CK+K +E L+ EM +G+ D
Sbjct: 300 FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 359
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
V Y TL LF + A K+F +M DGV D TY +DGLC N + +A+E+F
Sbjct: 360 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 419
Query: 380 TLRILKCELDIRAYNCLIDGL 400
++ + +LDI Y +I+G+
Sbjct: 420 YMQKSEIKLDIYIYTTMIEGM 440
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 185/366 (50%), Gaps = 23/366 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V FN + L K +H D L+LFK + + G+ P++ TY+ LI+C C GR S +L
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ PN VTF +LI E + +EA L + +P++FTYN+LING
Sbjct: 245 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING----- 299
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
F + +DKAK++F M ++ PD+ TY ++I+GFC +
Sbjct: 300 ------------------FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRV 341
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+ L EM +G+ + VT+ ++ L +G D A ++ M+ GV P+ Y+ L
Sbjct: 342 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 401
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG C G++ +A E+F M+ ++ Y+ +I G CK +++ L+ + KG+
Sbjct: 402 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 461
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
KP+VV YNT+ L ++ A+ L +M+ DG D+ TY T I ++ + E
Sbjct: 462 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 521
Query: 377 LFRTLR 382
L R +R
Sbjct: 522 LIREMR 527
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 122/268 (45%), Gaps = 23/268 (8%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P + ++N L + D +F+ + S FPDL TYN LI FCK RV
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
G + + + VT+T+LI+GL + A +F ++ G P++ TY+ L++
Sbjct: 344 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 403
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
GL G ++KA E+F M+ I D+ YT++I G
Sbjct: 404 GLCNNGK-----------------------LEKALEVFDYMQKSEIKLDIYIYTTMIEGM 440
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C A ++ L + +GV+PNVVT+N ++ LC + EA LL M + G P++
Sbjct: 441 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDS 500
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMES 278
YNTL+ G + EL M S
Sbjct: 501 GTYNTLIRAHLRDGDKAASAELIREMRS 528
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 140/410 (34%), Positives = 233/410 (56%), Gaps = 13/410 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P V F+ F +A+ K ++ VL K+L G+ ++YT NI+INCF
Sbjct: 75 LFQEMIRSRPLPGLV-DFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCF 133
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ + + VLG++++ + P+ TF +LI GLC E ++ +A L ++ GC+P++
Sbjct: 134 CRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDM 193
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
TYN+++NG+ R+G T +A ++ +M N + V +G +D A LF +
Sbjct: 194 VTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE 253
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M+ + I VVTY S++RG C A WN+ LL +M+ + + PNV+TFNV++D K GK
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ EA+ L MI G+ PN YNTLMDG+C+ R++ A + M C+ + +++
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI GYC K ++ + ++ + +G+ + V Y+ L + +++ A +LF EM G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
V D TY +DGLC N + +A+E+F L+ K +L I Y +I+G+
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 192/399 (48%), Gaps = 25/399 (6%)
Query: 4 FDYMLNM--RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
FD + M R V +++ + L ++ D +SLFK + + G+ + TYN L+
Sbjct: 213 FDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK G+ + G ++L ++ PN +TF L+ E ++ EA L+ ++ G PN
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
+ TYNTL++G + ++ + +A + M +PD+V
Sbjct: 333 IITYNTLMDG-----------------------YCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
T+TS+I+G+C ++ + + +G+ N VT+++++ C++GK+ A L M
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ GV P+ Y L+DG C G++ +A E+F ++ + Y+ +I G CK ++
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A +L+ + KG+KP+V+ Y + L + + A L +M+ DG A + TY T
Sbjct: 490 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 549
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I ++ + + +L ++ D + +ID L
Sbjct: 550 IRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 142/306 (46%), Gaps = 10/306 (3%)
Query: 103 IMEAAALFTKLRVFG-CEPNVFTYNTLINGLYRTGHTIVAL--NLFEEMASGN---GEFG 156
+M ++ T L+ F +P++ TL L T + ++ F + +GN E
Sbjct: 1 MMIQRSITTNLKAFRMVQPHLLKTGTLRTDLLCTISSFLSSCERDFSSITNGNVCFRERL 60
Query: 157 VEGFVDKAKE----LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
G VD K+ LF +M P +V ++ +N ++ G+
Sbjct: 61 RSGIVDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIA 120
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
N+ T N++++ C+ K A +L ++++G P+ +NTL++G CL G+V++A L
Sbjct: 121 HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVL 180
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
M GC + +Y+ ++NG C++ + A + +M + +K DV Y+T+ L
Sbjct: 181 VDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCR 240
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
++ A LF EM+ G+ + TY + + GLCK + L + + + ++
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300
Query: 393 YNCLID 398
+N L+D
Sbjct: 301 FNVLLD 306
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 4/192 (2%)
Query: 213 PNVVTFNVIMDELCKNG----KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
++ NV E ++G K D+A L MI+ P ++ T + N
Sbjct: 47 SSITNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNL 106
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
+ +E G H +++ +I+IN +C+ + A S+ G+++ G +PD +NTL
Sbjct: 107 VLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIN 166
Query: 329 VLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
L +V +A L D M +G D TY + ++G+C++ A ++ R + +
Sbjct: 167 GLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKA 226
Query: 389 DIRAYNCLIDGL 400
D+ Y+ +ID L
Sbjct: 227 DVFTYSTIIDSL 238
>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 152/409 (37%), Positives = 231/409 (56%), Gaps = 28/409 (6%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F ML + P+P V F + L K KHY TV+SLF +L G+ P++ + +ILINC+C
Sbjct: 59 FHRMLLLNPAPS-VIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYC 117
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+G++ F + +IL+ + PN +T T+L+KG C ++ EA + G N
Sbjct: 118 HLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQV 177
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
+Y TLINGL + G T AL + ++ V + V+ A EL+ +M
Sbjct: 178 SYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEM 237
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+P VVT S+I G+C + EA LL EM+ + + P+V TFN+++D LCK GK+
Sbjct: 238 ITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKI 297
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA + +M++ GV P+ Y++LMDG+CL VN+AK + YSI+
Sbjct: 298 KEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHV---------------YSIV 342
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
ING+CK K ++ ALSL+ EM + I PD V YN+L L + ++ A++L DEM+ G
Sbjct: 343 INGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQ 402
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
AD TY + ID LCKN ++ +A+ L + ++ +LD+ YN LIDGL
Sbjct: 403 PADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGL 451
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 172/335 (51%), Gaps = 3/335 (0%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++ + L K+K + L+ + + + P + T N LI +C +G+ F +L
Sbjct: 211 VVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLR 270
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ P+ TF L+ LC E +I EA + + G P+V TY++L++G
Sbjct: 271 EMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVN 330
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
A +++ + +G F VDKA LF +M+ I PD VTY S+I G C +
Sbjct: 331 EVNKAKHVYSIVING---FCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRI 387
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+ A L+ EM D G +++T+N ++D LCKN +D+A L+ + G++ + + YN L
Sbjct: 388 SYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNIL 447
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG C GR+ A+ +F + G TV++Y+I+ING C + A +L +M G
Sbjct: 448 IDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGC 507
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
PD V T+ LFE + ERA KL EM G+
Sbjct: 508 VPDAVTCETIIRALFENDKNERAEKLLREMIARGL 542
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 187/414 (45%), Gaps = 35/414 (8%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFG-CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILI 59
F IF +L M P + ++ G CL N L + + G + +Y LI
Sbjct: 126 FSIFAKILKMGYHPNTITLTTLVKGFCL--NHKVKEALHFHDHVLALGFHFNQVSYGTLI 183
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 119
N CK+G +L +I + + V ++++I GLC + + +A L++++
Sbjct: 184 NGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRIS 243
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKEL 167
P V T N+LI G G A L EM N V EG + +AK
Sbjct: 244 PTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSG 303
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL---------IEMMDQG-------- 210
M E + PDVVTY+S++ G+C N+ N+AK + I+M+D+
Sbjct: 304 IAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMR 363
Query: 211 ---VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+ P+ VT+N ++D LCK+G++ A L+D M G + YN+L+D C V+
Sbjct: 364 CRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVD 423
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
+A L ++ G +++Y+ILI+G CK ++ A ++ ++L KG V Y +
Sbjct: 424 KAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMI 483
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
L + A L +M+ +G D T T I L +N A +L R +
Sbjct: 484 NGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREM 537
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 111/240 (46%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
VD F +M N P V+ + ++ + L ++ G++PN+V+ ++
Sbjct: 52 VDDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSI 111
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C G+M A + ++++G PN TL+ GFCL +V A + ++G
Sbjct: 112 LINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALG 171
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
SY LING CK E AL + ++ K + DVV+Y+T+ L + V A+
Sbjct: 172 FHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAY 231
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+L+ EM ++ T + I G C EA L R + + D+ +N L+D L
Sbjct: 232 ELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDAL 291
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 149/409 (36%), Positives = 233/409 (56%), Gaps = 13/409 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F++++NM+P P V FN + G + K KH +SL K++ G+ P ++T +I INC+
Sbjct: 71 LFNHLINMQPLPS-VIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCY 129
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +G + F VLG +L+ + PN +T T+++KGLC + +A + G +
Sbjct: 130 CHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDE 189
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
Y TLINGL + G +I A L +EM F + KA++L+L+
Sbjct: 190 VCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLK 249
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ D I+PD++TYTS+IRGFC W E K L+ EM+++ + PNV TFNV++D C+ GK
Sbjct: 250 IVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGK 309
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
M EA + +LM++ G +P+ +NTL+ G CL G V A++LF ++ G V+SY+I
Sbjct: 310 MIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTI 369
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI GYCK K I+ A+SL+ EM K + D+V+Y++L L + ++ A++LF + DG
Sbjct: 370 LIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDG 429
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ TY ID CK I +ELF+ + + YN LI+G
Sbjct: 430 PPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILING 478
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 178/353 (50%), Gaps = 23/353 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +N++ K++ L+ ++ G+ PD+ TY LI FC+ G+ +
Sbjct: 222 PNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQL 281
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ ++ PN TF LI C + +++EA +F + G +P++ T+NTLI
Sbjct: 282 MCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLI----- 336
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+GH + G V +A++LF + + I PDV +YT +I G+C
Sbjct: 337 SGHCL------------------HGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCK 378
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+EA L EM + + ++V ++ ++D LCK+G++ A L + G PN YN
Sbjct: 379 RIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYN 438
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+D FC ++ ELF M G T TV +Y+ILINGYCK+K I A++L M SK
Sbjct: 439 ILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSK 498
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
+ PD + YN+LF L + ++ A++LF M G D TY +D CK
Sbjct: 499 NLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCK 551
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 172/391 (43%), Gaps = 54/391 (13%)
Query: 57 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF 116
+++ C R+ + F R C NA +S + I +A LF L
Sbjct: 26 VVMLCIATTTRLRYAFHKFLRFFSHCPKQNAKILSSF-------NGIDDAVTLFNHLINM 78
Query: 117 GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------------GEFG-- 156
P+V +NT+I + + H VA++L ++M GE G
Sbjct: 79 QPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFA 138
Query: 157 ---------------------------VEGFVDKAKELFLQMKDENINPDVVTYTSVIRG 189
+ G V KA + + + + D V Y ++I G
Sbjct: 139 FSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLING 198
Query: 190 FCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
C +A LL EM Q V+PN+V +N+I+D CK+ +A L ++ +G+ P+
Sbjct: 199 LCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPD 258
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
Y +L+ GFC TG+ K+L M + V+++++LI+ +C+ ++ A ++
Sbjct: 259 ILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFN 318
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
M+ +G +PD+V +NTL V A KLFD + G+ D W+Y I G CK
Sbjct: 319 LMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCK 378
Query: 370 YIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I EAV LF +R LDI Y+ LIDGL
Sbjct: 379 RIDEAVSLFNEMRCKNMVLDIVLYSSLIDGL 409
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 153/299 (51%), Gaps = 12/299 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++ L + + V L + + + P++YT+N+LI+ FC+ G++ +
Sbjct: 257 PDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGM 316
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ P+ VTF +LI G C ++EA LF + G P+V++Y LI G +
Sbjct: 317 FNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCK 376
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
A++LF EM N + G + A ELF + ++ P+V+T
Sbjct: 377 CKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVIT 436
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I FC D + L M +G+ P V+T+N++++ CK+ ++ EA LL +M
Sbjct: 437 YNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQ 496
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ P++ YN+L DG C +GR++ A ELF M G V +Y++L++ +CK +++
Sbjct: 497 SKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 277 bits (708), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 155/445 (34%), Positives = 241/445 (54%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P + F+ L +AK K +D V+S +++ G+ +LYTYNI+INC
Sbjct: 52 LFGEMVKSRPFPS-IVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCL 110
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL------------- 109
C+ ++S +LG++++ + P+ VT SL+ G C +RI EA AL
Sbjct: 111 CRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 170
Query: 110 --FT--------------------KLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
FT ++ V GC+P++ TY +INGL + G +ALNL +
Sbjct: 171 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK 230
Query: 148 MASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M G E V + VD A LF +M ++ I PDV TY+S+I C
Sbjct: 231 MEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 290
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++A LL +M+++ + PNVVTFN ++D K GK+ EA +L D MIQ + PN YN+
Sbjct: 291 WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNS 350
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L++GFC+ R++ A+++F M S C V +Y+ LING+CK K++ + L+ +M +G
Sbjct: 351 LINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRG 410
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ + V Y TL F+ + A +F +M DGV + TY T +DGLCKN + +A+
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
+F L+ K E DI YN + +G+
Sbjct: 471 VVFEYLQKSKMEPDIYTYNIMSEGM 495
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 192/384 (50%), Gaps = 23/384 (5%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++ + L K +H D L+LF +++ G+ PD++TY+ LI+C C GR S +L
Sbjct: 240 VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 299
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+L PN VTF SLI E +++EA LF ++ +PN+ TYN+LING
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLING----- 354
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
F + +D+A+++F M ++ PDVVTY ++I GFC A
Sbjct: 355 ------------------FCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKV 396
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+ L +M +G+ N VT+ ++ + D A + M+ GV PN YNTL
Sbjct: 397 VDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTL 456
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG C G++ +A +F ++ +++Y+I+ G CK ++E L+ + KG+
Sbjct: 457 LDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGV 516
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
KPDV+ YNT+ + E A+ LF +M+ DG D+ TY T I ++ + E
Sbjct: 517 KPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 576
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
L + +R + D Y + D L
Sbjct: 577 LIKEMRSCRFAGDASTYGLVTDML 600
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 137/269 (50%), Gaps = 5/269 (1%)
Query: 129 INGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
+ G+Y +G ++ + + E S N ++ +D+A +LF +M P +V ++ ++
Sbjct: 19 LRGIYFSG---LSYDGYREKLSRNALLHLK--LDEAVDLFGEMVKSRPFPSIVEFSKLLS 73
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
++ +M GV N+ T+N++++ LC+ ++ A +L M+++G P
Sbjct: 74 AIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGP 133
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
+ N+L++GFC R++ A L M MG +++ L++G ++ + A++L
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
M+ KG +PD+V Y + L + + + A L ++M++ + AD Y T ID LCK
Sbjct: 194 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKY 253
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLI 397
++ +A+ LF + D+ Y+ LI
Sbjct: 254 RHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 277 bits (708), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 146/398 (36%), Positives = 225/398 (56%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
PP+ FN + G LAK K Y T +SL K++ G+ + T NILINCFC +G+++ F V
Sbjct: 8 PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
LG+IL+ + P+ +T +L+KGLC + + ++ K+ G + + +Y TL+NGL +
Sbjct: 68 LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G T A+ L + + V + V++A +L+ +M I PD +T
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT++I GFC A LL EM+ + + P V +N++++ LCK G + EA LL +M
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G++P Y+TLMDG+CL G V AK++F +M MG V+SY+I+ING CK K ++
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A++L EML K + PD V YN+L L + ++ A L +EM G AD TY + +
Sbjct: 308 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLL 367
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D LCKN + +A LF ++ + + Y LIDGL
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGL 405
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 178/357 (49%), Gaps = 12/357 (3%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ R + P V +N + L K+K + L+ +++ G+FPD TY LI FC +G
Sbjct: 140 MIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLG 199
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
++ F +L ++ P + LI LC E + EA L + G +P V TY+
Sbjct: 200 QLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYS 259
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDE 174
TL++G G A +F M V + VD+A L +M +
Sbjct: 260 TLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHK 319
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
N+ PD VTY S+I G C + A L+ EM +G +VVT+ ++D LCKN +D+A
Sbjct: 320 NMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKA 379
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+ L M + G++P + Y L+DG C GR+ A+ELF + GC V++Y+++I+G
Sbjct: 380 TALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISG 439
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
CK + AL++ +M G P+ V + + LFE + ++A KL EM G+
Sbjct: 440 LCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 496
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%)
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M+ + P +N ++ + A L ME G + +ILIN +C +
Sbjct: 1 MLLVRHTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQ 60
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ + S+ G++L G +PD + NTL L +V+++ D++ G D +Y T
Sbjct: 61 MAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGT 120
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++GLCK AV+L R + ++ YN +IDGL
Sbjct: 121 LLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGL 160
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 277 bits (708), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 152/410 (37%), Positives = 231/410 (56%), Gaps = 12/410 (2%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ +L+ PP F + G L K K Y T LSL +++ G+ PD T N+L+NCF
Sbjct: 44 LFNRLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCF 103
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
++G + F V +IL+ + P+AVTFT LIKGLC + + +A K+ G + +
Sbjct: 104 SQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQ 163
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
+Y TLINGL R G T A+ L + V + V+ A +L+ +
Sbjct: 164 VSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCE 223
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + I+PDVVTY+S+I GFC A L M+ + PNV TF++++D CK GK
Sbjct: 224 MVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGK 283
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ EA +L +M++ V+ + YN+LMDG+CL +VN+AK LF M G T V+SYSI
Sbjct: 284 VREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSI 343
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+ING+CK K ++ A+ L+ EM K I P+VV YN+L L + + A +L DEM G
Sbjct: 344 MINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRG 403
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++ TY + +D +CKN+++ +A+ L ++ + DI Y LI+GL
Sbjct: 404 QPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGL 453
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 203/412 (49%), Gaps = 13/412 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F +L P V +F IL L L ++ + G D +Y LIN
Sbjct: 113 FSVFAKILKKGYHPDAV-TFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLIN 171
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C++G +L R+ PN V ++++I +C + + +A L+ ++ P
Sbjct: 172 GLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISP 231
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELF 168
+V TY++LI+G G A++LF M S N F EG V +AK +
Sbjct: 232 DVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVL 291
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
M +N+ DVVTY S++ G+C N+AK L M +GV P+V +++++++ CK
Sbjct: 292 AVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKI 351
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
+DEA +L + M + PN YN+L+DG C +GR + A EL M G + +Y
Sbjct: 352 KMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITY 411
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ +++ CKN ++ A+ L ++ KGI+PD+ Y L L ++ +++ A K+F+++
Sbjct: 412 NSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLV 471
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G + + +TY + I+G C + E + + ++ C + Y LI L
Sbjct: 472 KGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSL 523
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 185/349 (53%), Gaps = 12/349 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + + K+K + L+ + S + PD+ TY+ LI+ FC +G++ + +
Sbjct: 196 PNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDL 255
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R++ PN TF+ LI G C E ++ EA + + + +V TYN+L++G
Sbjct: 256 FNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCL 315
Query: 135 TGHTIVALNLFEEMAS-------GNGEFGVEGF-----VDKAKELFLQMKDENINPDVVT 182
A +LF MA + + GF VD+A +LF +M + I P+VVT
Sbjct: 316 VKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVT 375
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S++ G C + + A L+ EM D+G N++T+N I+D +CKN +D+A LL +
Sbjct: 376 YNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIK 435
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G++P+ F Y L++G C GR++ A+++F + G + +++Y+ LING+C +
Sbjct: 436 EKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFD 495
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
L++ +M G P+ + Y L LFE + ++A KL EM G+
Sbjct: 496 EGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P + ++N + + KN H D + L ++ G+ PD++TY +LIN CK+GR+
Sbjct: 402 RGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDD 461
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
V +L ++PN T+TSLI G C + E A+ +K++ GC PN TY LI+
Sbjct: 462 AQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIH 521
Query: 131 GLYRTGHTIVALNLFEEMAS 150
L+ A L EM +
Sbjct: 522 SLFEKDENDKAEKLLREMIA 541
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/446 (34%), Positives = 243/446 (54%), Gaps = 48/446 (10%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
+F M+ RP P + F+ L +AK +D V+SL +++ + G+ + YTY+IL+NC
Sbjct: 67 ALFGEMVKSRPFPS-IIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNC 125
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL------------ 109
FC+ ++ VLG++++ + P+ VT +SL+ G C RI EA AL
Sbjct: 126 FCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPD 185
Query: 110 -----------------------FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
++ GC+P++FTY T++NGL + G +AL+L +
Sbjct: 186 TVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLK 245
Query: 147 EMASGNGEFGV-------EGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+M G E V +G +D A +LF +M+ + I PDV TY S+I C
Sbjct: 246 KMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYG 305
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
W++A LL +M+++ + PNVVTFN ++D K GK+ EA +L D MIQ + PN YN
Sbjct: 306 RWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 365
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L++GFC+ R++ A+++F M S C V +Y+ LI G+CK K +E + L+ EM +
Sbjct: 366 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQR 425
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+ + V YNTL LF+ + A K+F +M DGV D TY +DGLCK + +A
Sbjct: 426 GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 485
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ +F L+ K E +I YN +I+G+
Sbjct: 486 LVVFEYLQKSKMEPNIYTYNIMIEGM 511
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 186/366 (50%), Gaps = 23/366 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +N + L K KH D LF ++ + G+ PD++TYN LI+C C GR S +L
Sbjct: 256 VVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLS 315
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ PN VTF SLI E +++EA LF ++ +PN+ TYN+LING
Sbjct: 316 DMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLING----- 370
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
F + +D+A+++F M ++ PDVVTY ++I+GFC A
Sbjct: 371 ------------------FCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRV 412
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
E L EM +G+ N VT+N ++ L + G D A ++ M+ GV P+ Y+ L
Sbjct: 413 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 472
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG C G++ +A +F ++ +++Y+I+I G CK ++E L+ + KG+
Sbjct: 473 LDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 532
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
KP+V+IY T+ E A LF EM+ DG D+ Y T I ++ + E
Sbjct: 533 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAE 592
Query: 377 LFRTLR 382
L + +R
Sbjct: 593 LIKEMR 598
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 175/363 (48%), Gaps = 24/363 (6%)
Query: 37 LSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 96
LS F R +G Y + N ++ ++ + G +++S P+ + F+ L+
Sbjct: 32 LSFFWRRAFSGKTSYDYREKLSRNGLSEL-KLDDAVALFGEMVKSRPFPSIIEFSKLLSA 90
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG 156
+ ++ +L +++ G N +TY+ L+N R +AL + +M + G
Sbjct: 91 IAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMM----KLG 146
Query: 157 VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
E PD+VT +S++ G+C+ +EA L+ +M++ G +P+ V
Sbjct: 147 YE-------------------PDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTV 187
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
TFN ++ L + K EA L+D M+ G +P+ F Y T+++G C G ++ A L M
Sbjct: 188 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 247
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
E V Y+ +I+G CK K ++ A L+ +M +KGIKPDV YN+L L +
Sbjct: 248 EKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRW 307
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
A +L +M + + T+ + ID K ++EA +LF + + +I YN L
Sbjct: 308 SDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 367
Query: 397 IDG 399
I+G
Sbjct: 368 ING 370
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 105/204 (51%)
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
++A L EM+ P+++ F+ ++ + K K D L + M +G+ N + Y+ L
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
++ FC ++ A + M +G + + S L+NGYC K I A++L +M+ G
Sbjct: 123 LNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGY 182
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
KPD V +NTL LF ++ A L D M G D +TY T ++GLCK I A+
Sbjct: 183 KPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 242
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
L + + K E ++ YN +IDGL
Sbjct: 243 LLKKMEKGKIEANVVIYNTIIDGL 266
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 72/137 (52%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + +++IL L K + L +F+ L + + P++YTYNI+I CK G+V G+
Sbjct: 463 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWD 522
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ + PN + +T++I G C + EA ALF +++ G P+ YNTLI
Sbjct: 523 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARL 582
Query: 134 RTGHTIVALNLFEEMAS 150
R G + L +EM S
Sbjct: 583 RDGDKAASAELIKEMRS 599
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 156/445 (35%), Positives = 240/445 (53%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P + FN L +AK K +D V+SL +R+ + + DLY+YNILINCF
Sbjct: 67 LFGEMVQSRP-LPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCF 125
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM------------------ 104
C+ ++ VLG++++ + P+ VT +SL+ G C RI
Sbjct: 126 CRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 185
Query: 105 -----------------EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
EA AL ++ GC+P++ TY ++NGL + G +AL+L ++
Sbjct: 186 VTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKK 245
Query: 148 MASGNGEFGV-------EGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M G E V +G +D A LF +M+ + I PDV TY S+I C
Sbjct: 246 MEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGR 305
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++A LL M+++ + PNVVTF+ ++D K GK+ EA +L D MI+ + P+ F Y++
Sbjct: 306 WSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 365
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L++GFC+ R++ AK +F M S C V +Y+ LI G+CK K +E + L+ EM +G
Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 425
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ + V YNTL LF+ + A K+F +M DGV D TY +DGLCK + +A+
Sbjct: 426 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 485
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
+F L+ K E DI YN +I+G+
Sbjct: 486 VVFEYLQKSKMEPDIYTYNIMIEGM 510
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 188/366 (51%), Gaps = 23/366 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +N + L K KH D +LF ++ + G+ PD++TYN LI+C C GR S +L
Sbjct: 255 VVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLS 314
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ PN VTF++LI E +++EA L+ ++ +P++FTY++LING
Sbjct: 315 NMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING----- 369
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
F + +D+AK +F M ++ P+VVTY ++I+GFC A
Sbjct: 370 ------------------FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
E L EM +G+ N VT+N ++ L + G D A ++ M+ GV P+ Y+ L
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG C G++ +A +F ++ +++Y+I+I G CK ++E L+ + KG+
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 531
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
KP+V+IY T+ E A LF EM+ DG D+ Y T I ++ + E
Sbjct: 532 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAE 591
Query: 377 LFRTLR 382
L + +R
Sbjct: 592 LIKEMR 597
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 126/408 (30%), Positives = 200/408 (49%), Gaps = 13/408 (3%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
+ D M+ M P V ++ G NK + V +L ++ G PDL TY ++N
Sbjct: 171 ALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAV-ALVDQMVQRGCQPDLVTYGAVVNG 229
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK G + +L ++ + + V + ++I GLC I +A ALF K+ G P+
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPD 289
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFL 169
VFTYN+LI+ L G A L M F EG + +A++L+
Sbjct: 290 VFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M +I+PD+ TY+S+I GFC + +EAK + M+ + PNVVT+N ++ CK
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+++E L M Q G+ N YNTL+ G G + A+++F M S G + +YS
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
IL++G CK ++E AL ++ + ++PD+ YN + + + +VE + LF +
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
GV + Y T I G C+ EA LFR ++ D YN LI
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLI 577
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 105/204 (51%)
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
++A L EM+ P++V FN ++ + K K D L + M + + + + YN L
Sbjct: 62 DDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNIL 121
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
++ FC ++ A + M +G + + S L+NGYC +K I A++L +M+ G
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 181
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
KPD V +NTL LF ++ A L D+M + G D TY ++GLCK I A+
Sbjct: 182 KPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALS 241
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
L + + K E D+ YN +IDGL
Sbjct: 242 LLKKMEKGKIEADVVIYNTIIDGL 265
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 145/301 (48%), Gaps = 13/301 (4%)
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG 156
+ ++S+ M A F +LR P +F+ + G+Y + + + E S N
Sbjct: 10 VASQSKKMSLAKRFAQLR--KASP-LFS----LRGVYFSAASYD----YREKLSRNALLN 58
Query: 157 VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
++ +D A LF +M P +V + ++ ++ L M + + ++
Sbjct: 59 LK--LDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLY 116
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
++N++++ C+ ++ A +L M+++G P+ ++L++G+C + R++ A L M
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 176
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
MG +++ LI+G + + A++L +M+ +G +PD+V Y + L + +
Sbjct: 177 VEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDI 236
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
+ A L +M++ + AD Y T IDGLCK +I +A LF + D+ YN L
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSL 296
Query: 397 I 397
I
Sbjct: 297 I 297
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 72/137 (52%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + +++IL L K + L +F+ L + + PD+YTYNI+I CK G+V G+
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ + PN + +T++I G C + EA ALF +++ G P+ YNTLI
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARL 581
Query: 134 RTGHTIVALNLFEEMAS 150
R G + L +EM S
Sbjct: 582 RDGDKAASAELIKEMRS 598
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 151/413 (36%), Positives = 233/413 (56%), Gaps = 14/413 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F M+ +P P V SF+ L + KHY +V+SLF+ ++ + + +I++N
Sbjct: 57 FSLFRQMVRTKPLPS-VASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVN 115
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCE 119
C M R GF VL + N VTFT+LI+GL AE+++ +A LF KL R CE
Sbjct: 116 SCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICE 175
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKEL 167
PN Y T++NGL + GHT A +L M G+ + F +G +D A L
Sbjct: 176 PNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSL 235
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
+MK ++I PD+ TY+++I C + W + L +EM+ + PNV TFN ++D LCK
Sbjct: 236 LNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCK 295
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
GK+++A ++ MI+ GV P+ YN ++DG+ L G+V+RA+E+F SM + + S
Sbjct: 296 EGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIIS 355
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y+ILINGY + K+I+ A+ + E+ KG+KP +V N L LFE+ + + A FDEM
Sbjct: 356 YNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEML 415
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G D +T+ T + G KN + EA+ F L + + +I+ Y +IDGL
Sbjct: 416 SAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGL 468
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 194/391 (49%), Gaps = 14/391 (3%)
Query: 22 ILFGCLAKNKHYDTVLSLFKRLNSTGL-FPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
++ G A+NK D V LFK+L + P+ Y ++N CK G F +L + +
Sbjct: 148 LIRGLFAENKVKDAV-HLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQ 206
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
PN T+T +I C + + A +L +++ P++FTY+TLI+ L +
Sbjct: 207 GSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWEN 266
Query: 141 ALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
LF EM N V EG V+ A+E+ M ++ ++PDV+TY +I
Sbjct: 267 VRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIID 326
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
G+ + A+ + M+++ ++P+++++N++++ + K+DEA ++ + Q G++P
Sbjct: 327 GYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKP 386
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
+ N L+ G GR A+ F M S G ++++ L+ GY KN +E A+S +
Sbjct: 387 SIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHF 446
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
++ + ++ IY + L + ++++A F+++ G+ D TY I G C+
Sbjct: 447 HKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQE 506
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ EA ++ R + C D R YN ++ G
Sbjct: 507 GLLDEAKDMLRKMEDNGCLADNRTYNVIVRG 537
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 179/367 (48%), Gaps = 23/367 (6%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++ + P ++ I+ K+ D SL + + PD++TY+ LI+ CK+
Sbjct: 203 LMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLS 262
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ + + ++ PN TF S+I GLC E ++ +A + + G +P+V TYN
Sbjct: 263 QWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYN 322
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
+I+G +G+ G VD+A+E+F M +++I PD+++Y +
Sbjct: 323 MIIDG-----------------------YGLRGQVDRAREIFDSMINKSIEPDIISYNIL 359
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G+ +EA + E+ +G++P++VT NV++ L + G+ A D M+ G
Sbjct: 360 INGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGH 419
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+ + + TL+ G+ G V A F +E + Y+ +I+G CKN +++ A +
Sbjct: 420 IPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHA 479
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
+ ++ G+ PDV+ Y + + ++ A + +M+ +G AD TY + G
Sbjct: 480 TFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFL 539
Query: 367 KNSYIVE 373
+++ + E
Sbjct: 540 RSNKVSE 546
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 150/324 (46%), Gaps = 23/324 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P VC+FN + L K + + + + G+ PD+ TYN++I+ + G+V +
Sbjct: 281 PNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREI 340
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ P+ +++ LI G + +I EA + ++ G +P++ T N L++GL+
Sbjct: 341 FDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFE 400
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G T A N F+EM S G + PD+ T+ +++ G+
Sbjct: 401 LGRTKSAQNFFDEMLSA-------GHI----------------PDLYTHCTLLGGYFKNG 437
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EA ++ + N+ + ++D LCKNGK+D+A + + IG+ P+ Y
Sbjct: 438 LVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYT 497
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
++ G+C G ++ AK++ ME GC +Y++++ G+ ++ ++ + E+ K
Sbjct: 498 AMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGK 557
Query: 315 GIKPDVVIYNTLFVVLFEIHQVER 338
+ L ++ E + R
Sbjct: 558 SFSFEAATVELLMDIIAEDPSITR 581
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 127/292 (43%), Gaps = 42/292 (14%)
Query: 150 SGNGEFGVEGF------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA---- 199
S G FGV +D A LF QM P V +++ +++ + ++
Sbjct: 36 SVKGNFGVSNEFQNVKCLDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLF 95
Query: 200 --------------------KCLLIEMMD-----------QGVQPNVVTFNVIMDELCKN 228
C L+ D +G+ N VTF ++ L
Sbjct: 96 REIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAE 155
Query: 229 GKMDEASRLLDLMIQIGV-RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
K+ +A L +++ + PN +Y T+M+G C G +A +L ME +
Sbjct: 156 NKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRT 215
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y+I+I+ +CK+ ++GA SL EM K I PD+ Y+TL L ++ Q E LF EM
Sbjct: 216 YTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMI 275
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + T+ + IDGLCK + +A E+ R + + D+ YN +IDG
Sbjct: 276 HLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDG 327
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IFD M+N + P + S+NIL A+ K D + + + ++ GL P + T N+L++
Sbjct: 340 IFDSMIN-KSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGL 398
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
++GR +L + P+ T +L+ G + EA + F KL + N+
Sbjct: 399 FELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNI 458
Query: 123 FTYNTLINGLYRTGHTIVALNLFEE---------------MASGNGEFGVEGFVDKAKEL 167
Y +I+GL + G A FE+ M SG + EG +D+AK++
Sbjct: 459 QIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISG---YCQEGLLDEAKDM 515
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
+M+D D TY ++RGF +N +E K L E+ + T ++MD + +
Sbjct: 516 LRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAE 575
Query: 228 NGKMDEASRLLDLMI 242
+ + + L I
Sbjct: 576 DPSITRKMHWIKLHI 590
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 150/413 (36%), Positives = 233/413 (56%), Gaps = 14/413 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F M+ +P P V SF+ L L KHY +V+S+F+ ++ + D + + ++N
Sbjct: 57 FSLFRQMVTTKPLPSAV-SFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALSTVVN 115
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCE 119
C M R GF VL + N VTFT+LI+GL AE+++ +A LF KL R CE
Sbjct: 116 SCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICE 175
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKEL 167
P+ Y T+++GL + GHT A +L M G + F +G +D A L
Sbjct: 176 PDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSL 235
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
+MK +NI PD++TYTS+I G + W + + L +EM+ + P+V TFN ++D LCK
Sbjct: 236 LNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCK 295
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
GK+++A ++ MI+ GV PN YN +MDG+CL G++ RA+ +F SM G + S
Sbjct: 296 EGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIIS 355
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y+ LINGY + K+++ A+ L+ E+ G+KP +V + L LFE+ + E A FDEMQ
Sbjct: 356 YTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQ 415
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G + +T+ T + G KN + EA+ F L + + +I+ Y +I+GL
Sbjct: 416 AAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGL 468
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 185/385 (48%), Gaps = 23/385 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + L K H L + + PD YNI+I+ FCK G + +
Sbjct: 176 PDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSL 235
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + P+ +T+TSLI GL S+ + LF ++ P+V T+N++I+GL +
Sbjct: 236 LNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCK 295
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
EG V+ A+E+ M ++ + P+ +TY V+ G+C
Sbjct: 296 -----------------------EGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRG 332
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
A+ + M+D+G++P+++++ +++ + KMD+A +L + Q G++P+ +
Sbjct: 333 QMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCS 392
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ G GR AK F M++ G ++++ L+ GY KN +E A+S + ++ +
Sbjct: 393 VLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERR 452
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
++ IY + L + ++++A F+++ G+ D TY I G C+ + EA
Sbjct: 453 REDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEA 512
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
++ R + C D R YN ++ G
Sbjct: 513 KDMLRKMEDNGCLPDNRTYNVIVRG 537
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 155/332 (46%), Gaps = 14/332 (4%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + ++ L L K ++ V +LF + ++PD+ T+N +I+ CK G+V
Sbjct: 245 PPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEE 304
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
++ ++ PN +T+ ++ G C ++ A +F + G EP++ +Y LING
Sbjct: 305 IMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYV 364
Query: 134 RTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDV 180
A+ LF E++ G F V G + AK F +M+ P++
Sbjct: 365 EKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEV-GRTECAKIFFDEMQAAGHIPNL 423
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
T+ +++ G+ EA ++ + N+ + +++ LCKNGK+D+A +
Sbjct: 424 YTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEK 483
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+ IG+ P+ Y ++ G+C G ++ AK++ ME GC +Y++++ G+ ++ +
Sbjct: 484 LPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSK 543
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
+ + E+ K + L ++ E
Sbjct: 544 VSEMKAFLKEIAGKSFSFEAATVELLMDIIAE 575
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 1/170 (0%)
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+D+A L M+ P+A ++ L+ + +F + + F+ S
Sbjct: 53 LDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALST 112
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
++N C + S+ KGI + V + TL LF ++V+ A LF ++ R+
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172
Query: 351 V-AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ D Y T +DGLCK + +A +L R + + D YN +ID
Sbjct: 173 ICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDA 222
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 50/108 (46%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
+ L R + + + L KN D + F++L GL PD+ TY +I+ +C+
Sbjct: 447 HKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQE 506
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL 113
G + +L ++ + P+ T+ +++G S++ E A ++
Sbjct: 507 GLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEI 554
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 274 bits (700), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 152/445 (34%), Positives = 240/445 (53%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P + FN L +AK K +D V+SL +++ G+ +LYTYNILINCF
Sbjct: 72 LFGGMVKSRPLPS-IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCF 130
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM------------------ 104
C+ ++S +LG++++ + P+ VT +SL+ G C RI
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190
Query: 105 -----------------EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
EA AL ++ GC+PN+ TY ++NGL + G +A NL +
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK 250
Query: 148 MASGNGEFGVEGFV------------DKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M + E V + D A LF +M+++ + P+V+TY+S+I C
Sbjct: 251 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYER 310
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++A LL +M+++ + PNVVTFN ++D K GK+ EA +L D MI+ + P+ F Y++
Sbjct: 311 WSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 370
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L++GFC+ R++ AK +F M S C V +Y+ LING+CK K I+ + L+ EM +G
Sbjct: 371 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG 430
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ + V Y TL F+ + A +F +M DGV + TY T +DGLCKN + +A+
Sbjct: 431 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 490
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
+F L+ K E I YN +I+G+
Sbjct: 491 VVFEYLQRSKMEPTIYTYNIMIEGM 515
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 167/315 (53%), Gaps = 12/315 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++ + L K +H D L+LF + + G+ P++ TY+ LI+C C R S +L
Sbjct: 260 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLS 319
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ PN VTF +LI E +++EA L+ ++ +P++FTY++LING
Sbjct: 320 DMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 379
Query: 137 HTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
A ++FE M S + F +D+ ELF +M + + VTYT
Sbjct: 380 RLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYT 439
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
++I GF A D + A+ + +M+ GV PN++T+N ++D LCKNGK+++A + + + +
Sbjct: 440 TLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 499
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
+ P + YN +++G C G+V +LF S+ G V Y+ +I+G+C+ E A
Sbjct: 500 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEA 559
Query: 305 LSLYGEMLSKGIKPD 319
+L+ +M G PD
Sbjct: 560 DALFRKMREDGPLPD 574
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 150/317 (47%), Gaps = 23/317 (7%)
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
F+ + + +++ ++ +A LF + P++F +N L++ + + + +
Sbjct: 46 FSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVI 105
Query: 143 NLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
+L E +M+ I+ ++ TY +I FC + + A L
Sbjct: 106 SLGE-----------------------KMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
L +MM G +P++VT + +++ C ++ +A L+D M+++G RP+ + TL+ G L
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
+ + A L M GC + +Y +++NG CK +I+ A +L +M + I+ +VVI
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
Y+T+ L + + A LF EM+ GV + TY + I LC +A L +
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 383 ILKCELDIRAYNCLIDG 399
K ++ +N LID
Sbjct: 323 ERKINPNVVTFNALIDA 339
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 117/255 (45%), Gaps = 18/255 (7%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC---KMGR 67
R P V +FN L K L+ + + PD++TY+ LIN FC ++
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
H F ++ I + CF PN VT+ +LI G C RI E LF ++ G N TY T
Sbjct: 384 AKHMFELM--ISKDCF-PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDEN 175
LI+G ++ A +F++M S + G ++KA +F ++
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 500
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+ P + TY +I G C A + L + +GV+P+V+ +N ++ C+ G +EA
Sbjct: 501 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEAD 560
Query: 236 RLLDLMIQIGVRPNA 250
L M + G P++
Sbjct: 561 ALFRKMREDGPLPDS 575
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%)
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++R ++ ++A L M+ P++ FN ++ + K K D L + M
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
++G+ N + YN L++ FC +++ A L M +G ++ + S L+NGYC K I
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A++L +M+ G +PD + + TL LF ++ A L D M + G + TY +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+GLCK I A L + K E ++ Y+ +ID L
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL 270
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 125/259 (48%), Gaps = 7/259 (2%)
Query: 149 ASGNGEF------GVEGF-VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
+SG+G++ G+ +D A LF M P + + ++ ++
Sbjct: 47 SSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVIS 106
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
L +M G+ N+ T+N++++ C+ ++ A LL M+++G P+ ++L++G+C
Sbjct: 107 LGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC 166
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
R++ A L M MG +++ LI+G + + A++L M+ +G +P++V
Sbjct: 167 HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 226
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
Y + L + ++ AF L ++M+ + A+ Y T ID LCK + +A+ LF +
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
Query: 382 RILKCELDIRAYNCLIDGL 400
++ Y+ LI L
Sbjct: 287 ENKGVRPNVITYSSLISCL 305
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 138/398 (34%), Positives = 227/398 (57%), Gaps = 24/398 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P + FN L + K K YD V+SL K++ G+ DLYT+NI+INCF
Sbjct: 72 LFREMVKTRPFPS-IVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCF 130
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +VS VLG++L+ + P+ VT SL+ G C +R+ +A +L K+ G P++
Sbjct: 131 CCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDI 190
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
YN +I+ L +T AL+ F+E+ + I P+VVT
Sbjct: 191 VAYNAIIDSLCKTRRVNDALDFFKEIGR-----------------------KGIRPNVVT 227
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+++ G C + WN+A LL +M+ + + PNV+T++ ++D KNGK+ EA + + M+
Sbjct: 228 YTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMV 287
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
++ + P+ Y++L++G CL R++ A ++F M S GC V SY+ LING+CK K +E
Sbjct: 288 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVE 347
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
+ L+ +M +G+ + V YNTL F++ V++A + F +M GV+ D WTY +
Sbjct: 348 DGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILL 407
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GLC N + +A+ +F ++ + +LDI Y +I G+
Sbjct: 408 GGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGM 445
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 159/315 (50%), Gaps = 14/315 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N + L K + + L FK + G+ P++ TY L+N C GR + +
Sbjct: 188 PDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARL 247
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ TPN +T+++L+ +++EA +F ++ +P++ TY++LINGL
Sbjct: 248 LRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCL 307
Query: 135 TGHTIVALNLFEEMASGNGEFG--------VEGF-----VDKAKELFLQMKDENINPDVV 181
A +F+ M S G F + GF V+ +LF +M + + V
Sbjct: 308 HDRIDEANQMFDLMVS-KGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTV 366
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY ++I+GF D ++A+ +M GV P++ T+N+++ LC NG +++A + + M
Sbjct: 367 TYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDM 426
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ + + Y T++ G C TG+V A LF S+ G + +Y+ +++G C
Sbjct: 427 QKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQ 486
Query: 302 EGALSLYGEMLSKGI 316
+LY +M +G+
Sbjct: 487 HEVEALYTKMKQEGL 501
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF+ M+ M P + +++ L L + D +F + S G FPD+ +YN LIN F
Sbjct: 282 IFEEMVRMSIDPD-IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGF 340
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK RV G + ++ + N VT+ +LI+G + +A F+++ FG P++
Sbjct: 341 CKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDI 400
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+TYN L+ GL G ++KA +F M+ ++ D+VT
Sbjct: 401 WTYNILLGGLCDNG-----------------------LLEKALVIFEDMQKSEMDLDIVT 437
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+VI+G C +A L + +G++P++VT+ +M LC G E L M
Sbjct: 438 YTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMK 497
Query: 243 QIGVRPNAFVYNTLMDGFCL-TGRVNRAKELFVSMESMG 280
Q G+ N + CL G + + EL M S G
Sbjct: 498 QEGLMKNDSM-------LCLGDGDITISAELIKKMLSCG 529
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 117/237 (49%)
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
A LF +M P +V + ++ ++ L +M G++ ++ TFN++++
Sbjct: 69 AINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
C ++ A +L M+++G P+ +L++GFC RV+ A L M +G
Sbjct: 129 CFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRP 188
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
+ +Y+ +I+ CK + + AL + E+ KGI+P+VV Y L L + A +L
Sbjct: 189 DIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLL 248
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+M + + + TY +D KN ++EA E+F + + + DI Y+ LI+GL
Sbjct: 249 RDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGL 305
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%)
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
++A L EM+ P++V FN ++ + K K D L M +G+R + + +N +
Sbjct: 67 HDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIV 126
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
++ FC +V+ A + M +G + L+NG+C+ + A+SL +M+ G
Sbjct: 127 INCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+PD+V YN + L + +V A F E+ R G+ + TY ++GLC + +A
Sbjct: 187 RPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAAR 246
Query: 377 LFRTLRILKCELDIRAYNCLIDG 399
L R + K ++ Y+ L+D
Sbjct: 247 LLRDMIKRKITPNVITYSALLDA 269
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 82/171 (47%)
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+ +A L M++ P+ +N L+ + + L ME +G + +++++
Sbjct: 65 KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
I+IN +C ++ ALS+ G+ML G +PD V +L ++V A L D+M
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G D Y ID LCK + +A++ F+ + ++ Y L++GL
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGL 235
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 154/445 (34%), Positives = 233/445 (52%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F ML RP P V FN LFG LA+ K YD VL+L K++ G+ DLYT NI+INCF
Sbjct: 77 LFQSMLRSRP-LPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCF 135
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL------------- 109
C+ ++ F +G+I + + PN VTF +L+ GLC E R+ EA L
Sbjct: 136 CRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDL 195
Query: 110 ----------------------FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
++ GC+PN FTY ++N + ++G+T AL+L +
Sbjct: 196 ITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRK 255
Query: 148 MASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M + V +G +D A F +M+ + I +V TY S+I FC
Sbjct: 256 MEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGR 315
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++ LL +M+ + + PNVVTF+ ++D L K GK+ EA L + MI G+ PN YN+
Sbjct: 316 WDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNS 375
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L+ G C R++ A ++ M S GC +++Y+ILING+CK K+++ + L+ +M +G
Sbjct: 376 LIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRG 435
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ D V Y+TL + ++ A K+F EM GV TY +DGLC N + EA+
Sbjct: 436 MIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEAL 495
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
+ + K ELDI YN +I G+
Sbjct: 496 GILDQMHKCKMELDIGIYNIIIHGM 520
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/370 (32%), Positives = 193/370 (52%), Gaps = 12/370 (3%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P V ++ I+ L K+ D LS F + + G+ +++TYN LI FC GR
Sbjct: 256 MEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGR 315
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
G +L ++ TPN VTF++LI L E ++ EA L+ ++ G EPN TYN+
Sbjct: 316 WDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNS 375
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGE-------FGVEGF-----VDKAKELFLQMKDEN 175
LI GL A + + M S + + GF VD LF +M
Sbjct: 376 LIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRG 435
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+ D VTY+++I+GFC + AK + EM+ QGV P ++T+ +++D LC NG+++EA
Sbjct: 436 MIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEAL 495
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+LD M + + + +YN ++ G C +V+ A LF S+ S G + SY+I+++G
Sbjct: 496 GILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGL 555
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
CK + A +L+ +M G +PD YNTL + + + +L +EM+R G ++D
Sbjct: 556 CKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDA 615
Query: 356 WTYRTFIDGL 365
T + +D L
Sbjct: 616 STVKIVMDML 625
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 114/274 (41%), Gaps = 35/274 (12%)
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
D A LF M P V+ + + ++ L +M +G+ ++ T N++
Sbjct: 72 DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIM 131
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG----------------- 264
++ C+ K+ A + + ++G PN +NTL++G CL G
Sbjct: 132 INCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQH 191
Query: 265 ------------------RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
RV+ A +L M + GC F+Y ++N CK+ AL
Sbjct: 192 VPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALD 251
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L +M + IKP VV Y + L + +++ A F EM+ G+ A+ +TY + I C
Sbjct: 252 LLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFC 311
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +L R + K ++ ++ LID L
Sbjct: 312 SFGRWDDGAQLLRDMITRKITPNVVTFSALIDSL 345
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 103/227 (45%), Gaps = 24/227 (10%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+++R +++ L +++ +F+ + S G+ P + TY IL++ C G
Sbjct: 431 MSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGE 490
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ +L ++ + + + +I G+C +++ +A +LF L G + ++ +YN
Sbjct: 491 LEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNI 550
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
+++GL + + +A LF +MK++ PD TY ++I
Sbjct: 551 MLSGLCKRSS-----------------------LSEADALFRKMKEDGYEPDGCTYNTLI 587
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
R ND + L+ EM G + T ++MD L +G++D++
Sbjct: 588 RAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDML-SSGELDKS 633
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%)
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K D+A L M++ P +N L T + + L ME G + +++ +
Sbjct: 70 KKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLN 129
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
I+IN +C+ +++ A S G++ G +P+ V +NTL L +V A +L D M
Sbjct: 130 IMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLS 189
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
D T T ++GLC + EAV+L + C+
Sbjct: 190 QHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQ 227
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/409 (36%), Positives = 233/409 (56%), Gaps = 13/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML MRP PPP+ F + G L K KHY V+ LF+R+ G+ + T NILIN +C
Sbjct: 37 FNRMLRMRP-PPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYC 95
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ +++ F V +IL+ + P+ +T+T+LI+GLC ++ E+ +L G + +
Sbjct: 96 HLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHV 155
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
+Y TLINGL + G T AL L ++ V + V A +L+ +M
Sbjct: 156 SYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEM 215
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
++ + P+VVTYTS+I GFC ++A LL EM+ + V PNV TFN ++D LCK GKM
Sbjct: 216 FEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKM 275
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA L+ +M++ GV P+ F YN LMDG+ L +AK +F M MG T V SYS++
Sbjct: 276 REAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVM 335
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I+G K K ++ A+ L+ M ++ + PDVV Y++L L + ++ A K DEM G
Sbjct: 336 ISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQ 395
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ TY + ID LCK+ + +A+ L + ++ + ++ YN L+DGL
Sbjct: 396 PPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGL 444
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 118/344 (34%), Positives = 182/344 (52%), Gaps = 12/344 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N + L K+K L+ + +FP++ TY LI FC +G++ F +
Sbjct: 187 PDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGL 246
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ PN TF +L+ GLC E ++ EA +L + G P+VFTYN L++G +
Sbjct: 247 LNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFL 306
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
A N+F MA V + +D+A +LF M++EN+ PDVV
Sbjct: 307 VKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVA 366
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+S+I G C + N A + EM D+G PNV+T+ ++D LCK+ ++D+A LL +
Sbjct: 367 YSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIK 426
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G++ N + YN L+DG C GR+ A+++F + G V +YSI+ING CK +
Sbjct: 427 DQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFD 486
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
AL+L +M KG PD + Y T+ FE ++A KL EM
Sbjct: 487 EALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREM 530
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 105/204 (51%), Gaps = 12/204 (5%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V S++++ L+K K D + LF+ + + + PD+ Y+ LI+ CK GR++ +
Sbjct: 329 VHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVD 388
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ PN +T+TSLI LC ++ +A AL K++ G + N++TYN L++GL + G
Sbjct: 389 EMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDG 448
Query: 137 HTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYT 184
A +F+++ V E D+A L +M+D+ PD + Y
Sbjct: 449 RLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYE 508
Query: 185 SVIRGFCYANDWNEAKCLLIEMMD 208
++I F + ++A+ LL EM+D
Sbjct: 509 TIINAFFEKDMNDKAEKLLREMID 532
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 70/138 (50%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP V ++ L L K+ D ++L K++ G+ ++YTYNIL++ CK GR++
Sbjct: 393 RGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTD 452
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
V +L + VT++ +I GLC ES EA L +K+ GC P+ Y T+IN
Sbjct: 453 AQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIIN 512
Query: 131 GLYRTGHTIVALNLFEEM 148
+ A L EM
Sbjct: 513 AFFEKDMNDKAEKLLREM 530
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%)
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+++A + M+++ P + ++ T LF ME G + +I
Sbjct: 30 LNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNI 89
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LIN YC ++I A S++ ++L G +PD++ Y TL L QV+ + D + G
Sbjct: 90 LINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQG 149
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ D +Y T I+GLCK A+ L R + C D+ YN +IDGL
Sbjct: 150 IKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGL 199
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 155/445 (34%), Positives = 236/445 (53%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ M+ RP P + F+ LF +A+ K YD VL K ++ G+ ++YT NI+INCF
Sbjct: 56 LFESMIQSRPLPSLI-DFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCF 114
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ ++ F V+GR L+ F PN +TF++LI G C E R+ EA AL ++ PNV
Sbjct: 115 CRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNV 174
Query: 123 FTYNTLINGLY-----------------------------------RTGHTIVALNLFEE 147
T NTLINGL ++G+T +AL+LF +
Sbjct: 175 VTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRK 234
Query: 148 MASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M + + V +G +D A LF +M+ + I DVV Y+S+I G C
Sbjct: 235 MEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGR 294
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++ +L EM+ + + PNVVTF+ ++D K GK+ EA L + M+ G+ P+ Y++
Sbjct: 295 WDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSS 354
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L+DGFC R+ A ++ M S GC + +YSILIN YCK K ++ + L+ E+ SKG
Sbjct: 355 LIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKG 414
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ D V YNTL + ++ A +LF EM GV TY +DGLC N + +A+
Sbjct: 415 LVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKAL 474
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
E+F ++ + L I YN +I G+
Sbjct: 475 EIFEKMQKSRMILGIGIYNIIIHGM 499
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/407 (30%), Positives = 200/407 (49%), Gaps = 13/407 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M+ M+ P V + N L L L L R+ G + TY ++N
Sbjct: 161 LVDRMVEMKYRPN-VVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRM 219
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G + + ++ + V ++ +I LC + + +A +LF ++ + G + +V
Sbjct: 220 CKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADV 279
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
Y+++I GL G + EM N F EG + +AKEL+ +
Sbjct: 280 VAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNE 339
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M I PD +TY+S+I GFC N EA +L M+ +G +PN+VT++++++ CK +
Sbjct: 340 MVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKR 399
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+D RL + G+ + YNTL+ GFC +G++N AKELF M S G +V +Y I
Sbjct: 400 VDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGI 459
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L++G C N E++ AL ++ +M + + IYN + + +V+ A+ LF + G
Sbjct: 460 LLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKG 519
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
V D TY I GLCK + EA LFR ++ C YN LI
Sbjct: 520 VKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILI 566
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 170/377 (45%), Gaps = 48/377 (12%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R V ++I+ L K+ + D LSLF + G+ D+ Y+ +I C GR
Sbjct: 238 RSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDD 297
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
G +L ++ PN VTF++LI E +++EA L+ ++ G P+ TY++LI+
Sbjct: 298 GAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLID 357
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINP 178
G + A + + M S E + + VD LF ++ + +
Sbjct: 358 GFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVA 417
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D VTY ++++GFC + N AK L EM+ +GV P+VVT+ +++D LC NG++ +A +
Sbjct: 418 DTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIF 477
Query: 239 DLMIQI-----------------------------------GVRPNAFVYNTLMDGFCLT 263
+ M + GV+P+ YN ++ G C
Sbjct: 478 EKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKK 537
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
G ++ A LF M+ GC + +Y+ILI + + ++ L EM +G D
Sbjct: 538 GSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTI 597
Query: 324 NTLFVVLFEIHQVERAF 340
+ VV+ ++++ F
Sbjct: 598 K-MVVVMLSDGRLDKTF 613
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 115/240 (47%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
V++A +LF M P ++ ++ + +++ EM G++ N+ T N+
Sbjct: 50 VNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNI 109
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C+ K+ A ++ ++ G PN ++TL++GFCL GRV+ A L M M
Sbjct: 110 MINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMK 169
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
V + + LING C + AL L M+ G + + + Y + + + A
Sbjct: 170 YRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALAL 229
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LF +M+ + A Y ID LCK+ + +A+ LF + + + D+ AY+ +I GL
Sbjct: 230 DLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGL 289
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%)
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
+VN A +LF SM ++ +S L + + KE + L EM GI+ ++ N
Sbjct: 49 KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
+ ++ AF + + G +T T+ T I+G C + EAV L + +
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEM 168
Query: 385 KCELDIRAYNCLIDGL 400
K ++ N LI+GL
Sbjct: 169 KYRPNVVTVNTLINGL 184
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/367 (39%), Positives = 213/367 (58%), Gaps = 12/367 (3%)
Query: 46 TGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME 105
GL P+ T NILINCFC++ RV GF VL + ++ P VTFT+LI GL + +
Sbjct: 4 AGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQ 63
Query: 106 AAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF----- 160
A LF + GC+P+ +TY T+INGL + G T +A LF++M + V +
Sbjct: 64 AVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIH 123
Query: 161 -------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
V++A ++F MK ++I+P + TYTS+I+G C + W EA LL EM + P
Sbjct: 124 SLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMP 183
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
NVVTFNV++D CK GK+ A +L M ++GV P+ YN+LM G+ + V A++LF
Sbjct: 184 NVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLF 243
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
M + GC VFSYSILINGYCK K I+ A L+ EM+ +G P+ V YNTL L ++
Sbjct: 244 DVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQL 303
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
++ A LF M +G + +TY +DG CK Y+ +A LFR ++ + ++ Y
Sbjct: 304 GRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMY 363
Query: 394 NCLIDGL 400
N L++ +
Sbjct: 364 NILVNAM 370
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 127/397 (31%), Positives = 207/397 (52%), Gaps = 12/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +F L L K + + LF + + G PD YTY +IN CK+G + +
Sbjct: 43 PTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGL 102
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ + N VT+++LI LC R+ EA +F+ ++ P +FTY +LI GL
Sbjct: 103 FKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCN 162
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
A L EM S N F EG V A+ + M + + PDVVT
Sbjct: 163 FSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVT 222
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S++ G+ + EA+ L M+ +G +P+V +++++++ CK ++DEA +L + MI
Sbjct: 223 YNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMI 282
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G PN YNTL+ G C GR+ A++LF +M + G +++Y+IL++G+CK +
Sbjct: 283 HQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLG 342
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ M S +KP++V+YN L + + ++ A +LF E+ G+ + Y T I
Sbjct: 343 KAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTII 402
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+GLCK + EA+E FR + C D +YN +I G
Sbjct: 403 NGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRG 439
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 197/396 (49%), Gaps = 21/396 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+ R P ++ + L K LFK++ G ++ TY+ LI+
Sbjct: 67 LFDDMV-ARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSL 125
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK RV+ + + +P T+TSLI+GLC SR EA+AL ++ PNV
Sbjct: 126 CKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNV 185
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE-----------GF-----VDKAKE 166
T+N L++ + G + A + + M E GVE G+ V +A++
Sbjct: 186 VTFNVLVDTFCKEGKVLAAEGVLKTMT----EMGVEPDVVTYNSLMYGYSMWTEVVEARK 241
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
LF M + PDV +Y+ +I G+C A +EAK L EM+ QG PN V++N ++ LC
Sbjct: 242 LFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLC 301
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
+ G++ EA L M G PN + Y L+DGFC G + +A LF +M+S +
Sbjct: 302 QLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLV 361
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
Y+IL+N CK+ ++ A L+ E+ G++P+V IY T+ L + ++ A + F M
Sbjct: 362 MYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNM 421
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
+ DG D ++Y I G ++ AV L +R
Sbjct: 422 EDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMR 457
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 166/355 (46%), Gaps = 24/355 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF YM + P + ++ L L + +L + S + P++ T+N+L++ F
Sbjct: 137 IFSYM-KAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTF 195
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G+V VL + P+ VT+ SL+ G + ++EA LF + GC+P+V
Sbjct: 196 CKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDV 255
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
F+Y+ LING + +D+AK+LF +M + P+ V+
Sbjct: 256 FSYSILINGYCKAKR-----------------------IDEAKQLFNEMIHQGSTPNNVS 292
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G C EA+ L M G PN+ T+ +++D CK G + +A RL M
Sbjct: 293 YNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQ 352
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
++PN +YN L++ C +G + A+ELF + +G V Y+ +ING CK ++
Sbjct: 353 STYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLD 412
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
AL + M G PD YN + + RA L EM+ G D T
Sbjct: 413 EALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 113/229 (49%)
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M+ ++P+ T +I FC + +L + + G+QP +VTF +++ L K GK
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+A L D M+ G +P+ + Y T+++G C G A LF ME GC V +YS
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI+ CK + + AL ++ M +K I P + Y +L L + + A L +EM
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + T+ +D CK ++ A + +T+ + E D+ YN L+ G
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYG 229
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 68/125 (54%)
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
ME G + + +ILIN +C+ + ++ S+ + + G++P +V + TL L ++ +
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
+A +LFD+M G D +TY T I+GLCK A LF+ + C+L++ Y+
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120
Query: 396 LIDGL 400
LI L
Sbjct: 121 LIHSL 125
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 154/420 (36%), Positives = 231/420 (55%), Gaps = 34/420 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI---------LINCFCKM 65
P +FNIL CL K + L+ + G PD+ TY+I LI+ CK
Sbjct: 8 PDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKE 67
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
G+V +L +++ + VT+++LIKGLC E RI EA LF ++ GC P+ TY
Sbjct: 68 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 127
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGNGEFGV-------------EGFV-----DKAKEL 167
TL+ GL +TG+ +AL L +EM + G +G+ +G D+A+EL
Sbjct: 128 GTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAREL 187
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
F +MK + + PDV++YTS+I GFC++ W +AKCL EM+D G+QP+V T V++D CK
Sbjct: 188 FKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCK 247
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
GK+ EA+ LL++M+ G + Y+TL+ G C+ R++ A +LF+SM+ +GC +
Sbjct: 248 EGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIA 307
Query: 288 YSILINGYCKNKEIEGALSLYGEMLS-------KGIKPDVVIYNTLFVVLFEIHQVERAF 340
Y L+ G C+ +I AL L+ EML+ K I+PDV + L +L + +V A
Sbjct: 308 YGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEAN 367
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+L + M + G D TY T I GLC I EA LF +++ L C D Y L+ GL
Sbjct: 368 ELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGL 427
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/409 (35%), Positives = 227/409 (55%), Gaps = 24/409 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+ L + ++ LF + G+ PD+ T ++LI+ CK G+V +
Sbjct: 491 PDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKL 550
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ + VT T+L+KGLC + RI +A LF K++ GC PNV T TL+ GL +
Sbjct: 551 LEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQ 610
Query: 135 TGHTIVALNLFEEMASGNGEFGVE------------------GFVDKAKELFLQMKDENI 176
+G+ +AL L + M S +G+ G D+A+ELF +MK +
Sbjct: 611 SGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGV 670
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
PDV++YTS+I GFC + W +AK L EM+D GVQP+V TF+V++D LCK GK+ EA+
Sbjct: 671 IPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANE 730
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
LL++MIQ G PN Y TL+ G C+ R++ A +LF+ M+ +GC V +Y L+ G C
Sbjct: 731 LLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLC 790
Query: 297 KNKEIEGALSLYGEMLSK------GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+ I+ AL L+ +MLS KPDV+ Y+ + L + + + A +LF EM+ G
Sbjct: 791 QTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALG 850
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
V + +Y + I G C++ + +A LF + +L+ Y+ +I G
Sbjct: 851 VIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHG 899
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 144/417 (34%), Positives = 234/417 (56%), Gaps = 31/417 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKR-LNSTGLF------PDLYTYNILINCFCKMGR 67
P ++ L L + + L L + LN T + PD+ T ++LI+ CK G+
Sbjct: 303 PDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGK 362
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V +L +++ + VT+++LIKGLC E RI EA LF ++ GC P+ TY T
Sbjct: 363 VIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGT 422
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGV-------------EGFV-----DKAKELFL 169
L+ GL +TG+ +AL L +EM + G +G+ +G D+A+ELF
Sbjct: 423 LMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFE 482
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+MK + I PDV++YT++I GFC + W +AKCL EM+D G+QP+V T +V++D LCK G
Sbjct: 483 EMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKG 542
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+ EA++LL+++IQ G + TL+ G C+ R+++A +LF+ M+ +GC V + +
Sbjct: 543 KVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCA 602
Query: 290 ILINGYCKNKEIEGALSLYGEMLSK----GI--KPDVVIYNTLFVVLFEIHQVERAFKLF 343
L+ G C++ I+ AL L+ MLS GI KP+ + Y+ + L + + + A +LF
Sbjct: 603 TLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELF 662
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
EM+ GV D +Y + I G C++ +A LF + + + D+ ++ LID L
Sbjct: 663 KEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDML 719
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 149/297 (50%), Gaps = 29/297 (9%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S++I+ L K D LFK + + G+ PD+ +Y LI+ FC+ G+ +
Sbjct: 637 PNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYL 696
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ P+ TF+ LI LC E +++EA L + GC PN TY TL+ GL
Sbjct: 697 FNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCM 756
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ +A +LF++M+ PDVVTY ++++G C
Sbjct: 757 NDR-----------------------ISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTG 793
Query: 195 DWNEAKCLLIEMMDQGVQ------PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
+ A L +M+ Q P+V+++++I+D LCK+G+ DEA L M +GV P
Sbjct: 794 NIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIP 853
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
N Y +L+ GFC +G++ AK LF M G +YS++I+G+CK +I+ AL
Sbjct: 854 NVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 157/315 (49%), Gaps = 27/315 (8%)
Query: 113 LRVFGCEPNVFTYNTLIN----------------GLYRTGHT--IVALNLFEEMASGNGE 154
+R+ G P+ FT+N LIN G+ R G+ IV ++ ++ + +
Sbjct: 1 MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60
Query: 155 FGV---EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
+ EG V +A EL M D+VTY+++I+G C + +EA L + M G
Sbjct: 61 IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ------IGVRPNAFVYNTLMDGFCLTGR 265
+P+ +T+ +M LC+ G ++ A +L M+ I +P Y+ ++DG C R
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
+ A+ELF M++ G V SY+ LI+G+C + + E A L+ EML GI+PDV
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L + + +V A +L + M G D TY T I GLC I EA +LF +++ L
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300
Query: 386 CELDIRAYNCLIDGL 400
C D AY L+ GL
Sbjct: 301 CRPDAIAYGTLMKGL 315
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/445 (33%), Positives = 236/445 (53%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M++ RP P V F+ LF +AK K YD VL+L K++ G+ +LYT +I+INCF
Sbjct: 75 LFRDMIHSRPLPT-VIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCF 133
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRI------------------- 103
C+ ++ F +G+I++ + PN +TF++LI GLC E R+
Sbjct: 134 CRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDL 193
Query: 104 ----------------MEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
EA L K+ +GC+PN TY ++N + ++G T +A+ L +
Sbjct: 194 ITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 148 MASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M N + G +D A LF +M+ + I +++TY +I GFC A
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 313
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++ LL +M+ + + PNVVTF+V++D K GK+ EA L MI G+ P+ Y +
Sbjct: 314 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 373
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L+DGFC +++A ++ M S GC + +++ILINGYCK I+ L L+ +M +G
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ D V YNTL E+ ++ A +LF EM V + TY+ +DGLC N +A+
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL 493
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
E+F + K ELDI YN +I G+
Sbjct: 494 EIFEKIEKSKMELDIGIYNIIIHGM 518
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 116/239 (48%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
D A +LF M P V+ ++ + ++ L +M +G+ N+ T ++
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C+ K+ A + +I++G PN ++TL++G CL GRV+ A EL M MG
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
+ + + L+NG C + + A+ L +M+ G +P+ V Y + V+ + Q A
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+L +M+ + D Y IDGLCK+ + A LF + + +I YN LI G
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%)
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
++Y +R ++A L +M+ P V+ F+ + + K + D L
Sbjct: 54 LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 113
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M G+ N + + +++ FC ++ A + +G ++S LING C
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ AL L M+ G KPD++ NTL L + A L D+M G + TY
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++ +CK+ A+EL R + +LD Y+ +IDGL
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 1/146 (0%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M++ R PP + ++ IL L N + L +F+++ + + D+ YNI+I+
Sbjct: 460 LFQEMVS-RKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +V + + + P T+ +I GLC + + EA LF K+ G P+
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 578
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEM 148
+TYN LI G ++ L EE+
Sbjct: 579 WTYNILIRAHLGDGDATKSVKLIEEL 604
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
L ++ P V ++NI+ G L K LF+++ G PD +TYNILI G
Sbjct: 534 LPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGD 593
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLI 94
+ ++ + R F+ +A T +I
Sbjct: 594 ATKSVKLIEELKRCGFSVDASTIKMVI 620
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/409 (36%), Positives = 231/409 (56%), Gaps = 12/409 (2%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+++L+MR P+ FN + L K H+ T +S K++ + PDL+T+NILINCFC
Sbjct: 51 FNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFC 110
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+G ++ F VL +I + F P+ VT T+LIKGLC ++ EA + G +
Sbjct: 111 HLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQV 170
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
+Y TLINGL +TG T AL + ++ + V + V A +L +M
Sbjct: 171 SYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEM 230
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I PDVVTYT++I G EA L +M+ + ++P+V TFN+++D LCK G+M
Sbjct: 231 IVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEM 290
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
+A +L +MI+ GV N YN+LMDG+ L + N+A +F +M G T V SYSI+
Sbjct: 291 KKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIM 350
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
ING CK K ++ A++L+ EM SK + P+ V YN+L L + ++ A+ L +EM G
Sbjct: 351 INGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQ 410
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
AD TY + +D LCKN + +A+ L ++ + +I Y L+DGL
Sbjct: 411 PADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGL 459
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 188/375 (50%), Gaps = 12/375 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S+ L L K L + ++++ + P++ YN +I+ CK V H + +
Sbjct: 171 SYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEM 230
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ P+ VT+T+LI G R+ EA LF ++ + +P+V+T+N L++GL + G
Sbjct: 231 IVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEM 290
Query: 139 IVALNLFEEMASGNGEFGV-------EGFV-----DKAKELFLQMKDENINPDVVTYTSV 186
A N+ M + + +G+ +KA +F M + PDV +Y+ +
Sbjct: 291 KKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIM 350
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G C +EA L EM + + PN VT+N ++D L K G++ +A L++ M G
Sbjct: 351 INGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQ 410
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+ Y++L+D C +V++A L ++ G +++Y+IL++G CKN ++ A +
Sbjct: 411 PADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQA 470
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
+Y ++L KG DV +YN + L + + A L +M+ +G D TY T + L
Sbjct: 471 VYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALF 530
Query: 367 KNSYIVEAVELFRTL 381
+N +AV+L R +
Sbjct: 531 ENDKNDKAVKLLREM 545
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 178/349 (51%), Gaps = 24/349 (6%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ R P V +++GCL + + V LF ++ + PD+YT+NIL++ CK G
Sbjct: 230 MIVKRIFPDVVTYTTLIYGCLIVGRLKEAV-GLFNQMLLKNIKPDVYTFNILVDGLCKEG 288
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ VL +++ N VT+ SL+ G + +A +F + G P+V +Y+
Sbjct: 289 EMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYS 348
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
+INGL +T A+NLF+EM S +++ P+ VTY S+
Sbjct: 349 IMINGLCKTKMVDEAVNLFKEMHS-----------------------KSMAPNTVTYNSL 385
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G ++A L+ EM ++G +V+T++ ++D LCKN ++D+A L+ + G+
Sbjct: 386 IDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGI 445
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+PN + Y L+DG C GR+ A+ ++ + G V Y++++NG CK + ALS
Sbjct: 446 QPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALS 505
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
L +M G PD V Y TL LFE + ++A KL EM G A +
Sbjct: 506 LVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQGSAVGS 554
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 146/409 (35%), Positives = 228/409 (55%), Gaps = 13/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F++M ++ P+P FN + L K Y T +SL+K++ + + PD +T NI+INCFC
Sbjct: 46 FNHMFHVHPTPHTF-HFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFC 104
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
G+V F + +IL+ + PN +T +L+KGLC E ++ EA K+ G +
Sbjct: 105 HFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGI 164
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
+Y LING+ + G T A+ L + + V + VD+A +L+ +M
Sbjct: 165 SYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEM 224
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+PDVVTY+ ++ GFC N A LL EM+ + + P++ T+ +++D LCK GK+
Sbjct: 225 VGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKV 284
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA +L +M++ V + VY+TLMDG+CL VN AK +F +M MG T V YSI+
Sbjct: 285 KEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIM 344
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
ING CK K ++ AL+L+ E+ K + PD V Y +L L + ++ + LFDEM G
Sbjct: 345 INGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQ 404
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D TY ID LCKN ++ A+ LF ++ ++ + L+DGL
Sbjct: 405 PPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGL 453
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 167/337 (49%), Gaps = 23/337 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++IL + + L + + PD+YTY IL++ CK G+V V
Sbjct: 231 PDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENV 290
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++++C + V +++L+ G C + + A +F + G P+V Y+ +INGL +
Sbjct: 291 LAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCK 350
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
ALNLFEE+ +N+ PD VTYTS+I C +
Sbjct: 351 IKRVDEALNLFEEI-----------------------HQKNMVPDTVTYTSLIDCLCKSG 387
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ L EM+D+G P+V+T+N ++D LCKNG +D A L + M +RPN + +
Sbjct: 388 RISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFT 447
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DG C GR+ A E F + + G V +Y+++ING CK ++ AL+L M
Sbjct: 448 ILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDN 507
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
G D V + + F+ + ++A KL EM G+
Sbjct: 508 GCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGL 544
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 12/218 (5%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
Y + P V ++I+ L K K D L+LF+ ++ + PD TY LI+C CK
Sbjct: 327 YTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKS 386
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
GR+S+ + + +L P+ +T+ +LI LC + A ALF K++ PNV+T+
Sbjct: 387 GRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTF 446
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKD 173
L++GL + G AL F+++ + V EG +D+A L +M+D
Sbjct: 447 TILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMED 506
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
D VT+ +IR F ++ ++A+ L+ EM+ +G+
Sbjct: 507 NGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGL 544
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 114/273 (41%), Gaps = 35/273 (12%)
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
D A F M + P + ++ + A L +M V+P+ T N+I
Sbjct: 40 DDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNII 99
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
++ C G++ A + ++++G +PN NTLM G CL G+V A + + G
Sbjct: 100 INCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGF 159
Query: 282 THTVFSYSILINGYCKNKEIEGAL-----------------------------------S 306
+ SY ILING CK E A+
Sbjct: 160 RLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYD 219
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
LY EM+ KGI PDVV Y+ L + Q+ RA L +EM + + D +TY +D LC
Sbjct: 220 LYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALC 279
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
K + EA + + LD+ Y+ L+DG
Sbjct: 280 KEGKVKEAENVLAVMVKACVNLDVVVYSTLMDG 312
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 56/139 (40%)
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
LT + A F M + T F ++ ++ K A+SLY +M ++PD
Sbjct: 35 LTHNADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYF 94
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
N + QV AF ++ + G +T T T + GLC + EA+ +
Sbjct: 95 TLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKV 154
Query: 382 RILKCELDIRAYNCLIDGL 400
L +Y LI+G+
Sbjct: 155 LAQGFRLSGISYGILINGV 173
>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 589
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 152/410 (37%), Positives = 218/410 (53%), Gaps = 14/410 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F M+ M P P F LFG + K KHY T +SL K + S G+ PD+YT I+INC C
Sbjct: 59 FHKMVVMNPLPREK-DFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIIINCLC 117
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ GF VLG + + P VTF +LI GLCAE + AA L G + N +
Sbjct: 118 HLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSY 177
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV-------------EGFVDKAKELFLQ 170
TY +INGL + G T A+ E++ N + V +G V +A LF
Sbjct: 178 TYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSG 237
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + I PD+V Y S+I G C W EA LL MM +G+ PNV TFNV++D CK+G
Sbjct: 238 MTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGM 297
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ A ++ M+ +GV P+ YN+++ G CL ++ A ++F M G + +YS
Sbjct: 298 ISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSS 357
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI+G+CK K I AL L GEM++ G+ PDVV ++TL + + E A +LF M
Sbjct: 358 LIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHD 417
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ T +DGL K + EA+ LFR + + EL++ YN ++DG+
Sbjct: 418 QHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGM 467
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 172/364 (47%), Gaps = 12/364 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +++ + L K+ L+LF + S G+ PDL YN LI+ C GR +LG
Sbjct: 212 VIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLG 271
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++R PN TF L+ C + I A + + G EP+V TYN++I+G
Sbjct: 272 NMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLS 331
Query: 137 HTIVALNLFEEMASG-------NGEFGVEGF-----VDKAKELFLQMKDENINPDVVTYT 184
A+ +FE M + G+ ++KA L +M + +NPDVVT++
Sbjct: 332 QMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWS 391
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
++I GFC A AK L M + PN+ T +I+D L K EA L M ++
Sbjct: 392 TLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKM 451
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
+ N +YN ++DG C G++N A+ELF + S G V +Y+ +I G CK ++ A
Sbjct: 452 NLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDA 511
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
+L +M G P+ YN L + + + R+ K M+ G++AD T I
Sbjct: 512 ENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATTTELLISY 571
Query: 365 LCKN 368
N
Sbjct: 572 FSAN 575
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 185/399 (46%), Gaps = 13/399 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +F L L + L G + YTY +IN CK G S +
Sbjct: 139 PTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILY 198
Query: 75 LGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
L +I R+C + +++++ LC + + EA LF+ + G +P++ YN+LI+GL
Sbjct: 199 LEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLC 258
Query: 134 RTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
G A L M F +G + +AK + M + PDVV
Sbjct: 259 NFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVV 318
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY SVI G C + +A + M+ +G PN+VT++ ++ CK +++A LL M
Sbjct: 319 TYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEM 378
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G+ P+ ++TL+ GFC G+ AKELF +M + + +I+++G K +
Sbjct: 379 VNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFH 438
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A+SL+ EM ++ +VVIYN + + ++ A +LF + G+ D Y T
Sbjct: 439 SEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTM 498
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I GLCK + +A L + C + YN + GL
Sbjct: 499 IKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGL 537
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 141/298 (47%), Gaps = 12/298 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FN+L K+ ++ + G+ PD+ TYN +I+ C + ++ V
Sbjct: 280 PNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKV 339
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ F PN VT++SLI G C I +A L ++ G P+V T++TLI G +
Sbjct: 340 FELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCK 399
Query: 135 TGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKDENINPDVVT 182
G A LF M + ++ F +A LF +M+ N+ +VV
Sbjct: 400 AGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVI 459
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y V+ G C N+A+ L + +G++ +VV + ++ LCK G +D+A LL M
Sbjct: 460 YNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKME 519
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+ G PN F YN + G ++R+ + + M+ G + + +LI+ + NKE
Sbjct: 520 ENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATTTELLISYFSANKE 577
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 151/445 (33%), Positives = 236/445 (53%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M++ RP P V F+ LF +AK K YD VL+L K++ G+ +LYT +I+INCF
Sbjct: 173 LFRDMIHSRPLPT-VIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCF 231
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL------------- 109
C+ ++ F +G+I++ + PN +TF++LI GLC E R+ EA L
Sbjct: 232 CRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDL 291
Query: 110 ----------------------FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
K+ +GC+PN TY ++N + ++G T +A+ L +
Sbjct: 292 ITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRK 351
Query: 148 MASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M N + G +D A LF +M+ + I +++TY +I GFC A
Sbjct: 352 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 411
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++ LL +M+ + + PNVVTF+V++D K GK+ EA L MI G+ P+ Y +
Sbjct: 412 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 471
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L+DGFC +++A ++ M S GC + +++ILINGYCK I+ L L+ +M +G
Sbjct: 472 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 531
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ D V YNTL E+ ++ A +LF EM V + TY+ +DGLC N +A+
Sbjct: 532 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL 591
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
E+F + K ELDI YN +I G+
Sbjct: 592 EIFEKIEKSKMELDIGIYNIIIHGM 616
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 116/239 (48%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
D A +LF M P V+ ++ + ++ L +M +G+ N+ T ++
Sbjct: 167 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 226
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C+ K+ A + +I++G PN ++TL++G CL GRV+ A EL M MG
Sbjct: 227 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 286
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
+ + + L+NG C + + A+ L +M+ G +P+ V Y + V+ + Q A
Sbjct: 287 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 346
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+L +M+ + D Y IDGLCK+ + A LF + + +I YN LI G
Sbjct: 347 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 405
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%)
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
++A L +M+ P V+ F+ + + K + D L M G+ N + + +
Sbjct: 168 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 227
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
++ FC ++ A + +G ++S LING C + AL L M+ G
Sbjct: 228 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 287
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
KPD++ NTL L + A L D+M G + TY ++ +CK+ A+E
Sbjct: 288 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 347
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
L R + +LD Y+ +IDGL
Sbjct: 348 LLRKMEERNIKLDAVKYSIIIDGL 371
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 1/146 (0%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M++ R PP + ++ IL L N + L +F+++ + + D+ YNI+I+
Sbjct: 558 LFQEMVS-RKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 616
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +V + + + P T+ +I GLC + + EA LF K+ G P+
Sbjct: 617 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 676
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEM 148
+TYN LI G ++ L EE+
Sbjct: 677 WTYNILIRAHLGDGDATKSVKLIEEL 702
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 78/169 (46%)
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K D+A L MI P ++ L T + + L ME G H +++ S
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 225
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
I+IN +C+ +++ A S G+++ G +P+ + ++TL L +V A +L D M
Sbjct: 226 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 285
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
G D T T ++GLC + EA+ L + C+ + Y +++
Sbjct: 286 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 334
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
L ++ P V ++NI+ G L K LF+++ G PD +TYNILI G
Sbjct: 632 LPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGD 691
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAES 101
+ ++ + R F+ +A T +I L +
Sbjct: 692 ATKSVKLIEELKRCGFSVDASTIKMVIDMLSDDK 725
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 270 bits (691), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 136/398 (34%), Positives = 229/398 (57%), Gaps = 24/398 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P + FN L + K K YD V+SL K++ G+ DLYT+NI+INCF
Sbjct: 175 LFSDMVKSRPFPS-IVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCF 233
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +VS +LG++L+ + P+ VT SL+ G C +R+ +A +L K+ G +P++
Sbjct: 234 CCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDI 293
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
YN +I+ L +T V+ A + F +++ + I P+VVT
Sbjct: 294 VAYNAIIDSLCKTKR-----------------------VNDAFDFFKEIERKGIRPNVVT 330
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+++ G C ++ W++A LL +M+ + + PNV+T++ ++D KNGK+ EA L + M+
Sbjct: 331 YTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 390
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
++ + P+ Y++L++G CL R++ A ++F M S GC V SY+ LING+CK K +E
Sbjct: 391 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 450
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
+ L+ EM +G+ + V YNTL F+ V++A + F +M G++ D WTY +
Sbjct: 451 DGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 510
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GLC N + +A+ +F ++ + +LDI Y +I G+
Sbjct: 511 GGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGM 548
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 152/445 (34%), Positives = 243/445 (54%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P + F+ L +AK +D V+SL +++ + G+ + YTY+ILINCF
Sbjct: 682 LFGEMVKSRPFPS-IIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCF 740
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ ++ VLG++++ + PN VT +SL+ G C RI EA AL ++ V G +PN
Sbjct: 741 CRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNT 800
Query: 123 FTYNTLINGLY-----------------------------------RTGHTIVALNLFEE 147
T+NTLI+GL+ + G T +A NL +
Sbjct: 801 VTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNK 860
Query: 148 MASGNGEFGV-------EGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M G E GV +G +D A LF +M+ + I P+VVTY+S+I C
Sbjct: 861 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 920
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++A LL +M+++ + P+V TF+ ++D K GK+ EA +L D M++ + P+ Y++
Sbjct: 921 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 980
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L++GFC+ R++ AK++F M S C V +Y+ LI G+CK K +E + ++ EM +G
Sbjct: 981 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 1040
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ + V YN L LF+ + A ++F EM DGV + TY T +DGLCKN + +A+
Sbjct: 1041 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 1100
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
+F L+ K E I YN +I+G+
Sbjct: 1101 VVFEYLQRSKMEPTIYTYNIMIEGM 1125
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 189/368 (51%), Gaps = 23/368 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N + L K KH D L+LFK + + G+ P++ TY+ LI+C C GR S +
Sbjct: 868 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 927
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+ TF++LI E +++EA L+ ++ +P++ TY++LING
Sbjct: 928 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING--- 984
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
F + +D+AK++F M ++ PDVVTY ++I+GFC
Sbjct: 985 --------------------FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 1024
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
E + EM +G+ N VT+N+++ L + G D A + M+ GV PN YN
Sbjct: 1025 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 1084
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+DG C G++ +A +F ++ T+++Y+I+I G CK ++E L+ + K
Sbjct: 1085 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 1144
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+KPDVV YNT+ E A LF EM+ DG ++ Y T I ++ +
Sbjct: 1145 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 1204
Query: 375 VELFRTLR 382
EL + +R
Sbjct: 1205 AELIKEMR 1212
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 194/414 (46%), Gaps = 33/414 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++NIL G L N + L +F+ + + D+ TY +I CK G+V + +
Sbjct: 501 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 560
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN-------- 126
+ P+ VT+T+++ GLC + + E AL+TK++ G N T +
Sbjct: 561 FCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSA 620
Query: 127 TLINGLYRTGHTIV------------ALNL-----------FEEMASGNGEFGVEGFVDK 163
LI + G+ AL+L + E S NG ++ +D
Sbjct: 621 ELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELK--LDD 678
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
A LF +M P ++ ++ ++ N ++ L +M + G+ N T++++++
Sbjct: 679 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 738
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
C+ ++ A +L M+++G PN ++L++G+C + R++ A L M G
Sbjct: 739 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 798
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
+++ LI+G + + A++L M++KG +PD+V Y + L + + AF L
Sbjct: 799 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 858
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
++M++ + Y T IDGLCK ++ +A+ LF+ + ++ Y+ LI
Sbjct: 859 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 912
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 187/426 (43%), Gaps = 30/426 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF+ M R + ++ + + K + SLF L+ GL PD+ TY +++
Sbjct: 525 IFEDM-QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 583
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE--SRIME---AAALFTKLRVFG 117
C G + + ++ + N T + L AE +++ A +L ++
Sbjct: 584 CTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGV 643
Query: 118 CEP-----NVFTYNTLIN---GLYRTGHTIVALN----LFEEMASGNGEFGVEGFV---- 161
C+ F+ T + L R G + + L+ LF EM + F
Sbjct: 644 CKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLS 703
Query: 162 --------DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
D L QM++ I + TY+ +I FC + A +L +MM G +P
Sbjct: 704 AIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEP 763
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
N+VT + +++ C + ++ EA L+D M G +PN +NTL+ G L + + A L
Sbjct: 764 NIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALI 823
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
M + GC + +Y +++NG CK + + A +L +M ++P V+IYNT+ L +
Sbjct: 824 DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKY 883
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
++ A LF EM+ G+ + TY + I LC +A L + K D+ +
Sbjct: 884 KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 943
Query: 394 NCLIDG 399
+ LID
Sbjct: 944 SALIDA 949
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 131/296 (44%), Gaps = 14/296 (4%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V +F+ L K L+ + + P + TY+ LIN FC R+
Sbjct: 934 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 993
Query: 71 GFVVLG-RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
+ + + CF P+ VT+ +LIKG C R+ E +F ++ G N TYN LI
Sbjct: 994 AKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 1052
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENIN 177
GL++ G +A +F+EM S + G ++KA +F ++ +
Sbjct: 1053 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 1112
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P + TY +I G C A + L + +GV+P+VV +N ++ C+ G +EA L
Sbjct: 1113 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 1172
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
M + G PN+ YNTL+ G + EL M S G + ++ N
Sbjct: 1173 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 1228
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 118/240 (49%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
++ A +LF M P +V + ++ ++ L +M G++ ++ TFN+
Sbjct: 169 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 228
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C ++ A +L M+++G P+ +L++GFC RV+ A L M +G
Sbjct: 229 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 288
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
+ +Y+ +I+ CK K + A + E+ KGI+P+VV Y L L + A
Sbjct: 289 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 348
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+L +M + + + TY +D KN ++EA ELF + + + DI Y+ LI+GL
Sbjct: 349 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 408
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 82/171 (47%)
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+++A L M++ P+ +N L+ + + L ME +G + +++++
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
I+IN +C ++ ALS+ G+ML G +PD V +L ++V A L D+M
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G D Y ID LCK + +A + F+ + ++ Y L++GL
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 338
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 270 bits (691), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 137/398 (34%), Positives = 229/398 (57%), Gaps = 24/398 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P V FN L + K K YD V+SL K++ G+ DLYT+NI+INCF
Sbjct: 72 LFSDMVKSRPFPSIV-DFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCF 130
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +VS +LG++L+ + P+ VT SL+ G C +R+ +A +L K+ G +P++
Sbjct: 131 CCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDI 190
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
YN +I+ L +T V+ A + F +++ + I P+VVT
Sbjct: 191 VAYNAIIDSLCKTKR-----------------------VNDAFDFFKEIERKGIRPNVVT 227
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+++ G C ++ W++A LL +M+ + + PNV+T++ ++D KNGK+ EA L + M+
Sbjct: 228 YTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
++ + P+ Y++L++G CL R++ A ++F M S GC V SY+ LING+CK K +E
Sbjct: 288 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
+ L+ EM +G+ + V YNTL F+ V++A + F +M G++ D WTY +
Sbjct: 348 DGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GLC N + +A+ +F ++ + +LDI Y +I G+
Sbjct: 408 GGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGM 445
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 122/259 (47%), Gaps = 21/259 (8%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ M+ M P V +++ L L + D +F + S G D+ +YN LIN F
Sbjct: 282 LFEEMVRMSIDPDIV-TYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 340
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK RV G + + + N VT+ +LI+G + +A F+++ FG P++
Sbjct: 341 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
+TYN L+ GL G AL +FE+M + + G V++A LF
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 460
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ + + PD+VTYT+++ G C +E + L +M +G+ N T + +G
Sbjct: 461 LSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS--------DGD 512
Query: 231 MDEASRLLDLMIQIGVRPN 249
+ ++ L+ M+ G P+
Sbjct: 513 ITLSAELIKKMLSCGYAPS 531
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 118/240 (49%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
++ A +LF M P +V + ++ ++ L +M G++ ++ TFN+
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C ++ A +L M+++G P+ +L++GFC RV+ A L M +G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
+ +Y+ +I+ CK K + A + E+ KGI+P+VV Y L L + A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+L +M + + + TY +D KN ++EA ELF + + + DI Y+ LI+GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 82/171 (47%)
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+++A L M++ P+ +N L+ + + L ME +G + +++++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
I+IN +C ++ ALS+ G+ML G +PD V +L ++V A L D+M
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G D Y ID LCK + +A + F+ + ++ Y L++GL
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 270 bits (691), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 137/398 (34%), Positives = 229/398 (57%), Gaps = 24/398 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P V FN L + K K YD V+SL K++ G+ DLYT+NI+INCF
Sbjct: 72 LFSDMVKSRPFPSIV-DFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCF 130
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +VS +LG++L+ + P+ VT SL+ G C +R+ +A +L K+ G +P++
Sbjct: 131 CCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDI 190
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
YN +I+ L +T V+ A + F +++ + I P+VVT
Sbjct: 191 VAYNAIIDSLCKTKR-----------------------VNDAFDFFKEIERKGIRPNVVT 227
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+++ G C ++ W++A LL +M+ + + PNV+T++ ++D KNGK+ EA L + M+
Sbjct: 228 YTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
++ + P+ Y++L++G CL R++ A ++F M S GC V SY+ LING+CK K +E
Sbjct: 288 RMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
+ L+ EM +G+ + V YNTL F+ V++A + F +M G++ D WTY +
Sbjct: 348 DGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GLC N + +A+ +F ++ + +LDI Y +I G+
Sbjct: 408 GGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGM 445
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 122/259 (47%), Gaps = 21/259 (8%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ M+ M P V +++ L L + D +F + S G D+ +YN LIN F
Sbjct: 282 LFEEMVRMSIDPDIV-TYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 340
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK RV G + + + N VT+ +LI+G + +A F+++ FG P++
Sbjct: 341 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
+TYN L+ GL G AL +FE+M + + G V++A LF
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 460
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ + + PD+VTYT+++ G C +E + L +M +G+ N T + +G
Sbjct: 461 LSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS--------DGD 512
Query: 231 MDEASRLLDLMIQIGVRPN 249
+ ++ L+ M+ G P+
Sbjct: 513 ITLSAELIKKMLSCGYAPS 531
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 118/240 (49%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
++ A +LF M P +V + ++ ++ L +M G++ ++ TFN+
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C ++ A +L M+++G P+ +L++GFC RV+ A L M +G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
+ +Y+ +I+ CK K + A + E+ KGI+P+VV Y L L + A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+L +M + + + TY +D KN ++EA ELF + + + DI Y+ L++GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGL 305
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 82/171 (47%)
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+++A L M++ P+ +N L+ + + L ME +G + +++++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
I+IN +C ++ ALS+ G+ML G +PD V +L ++V A L D+M
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G D Y ID LCK + +A + F+ + ++ Y L++GL
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 582
Score = 270 bits (691), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 148/409 (36%), Positives = 227/409 (55%), Gaps = 12/409 (2%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ +L+ + PP+ FN + L K KH+ T LSL +++ G+ D +T+NILINCF
Sbjct: 57 FNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFS 116
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
++G S F V G+IL+ F PNA+TF +LIKGLC + I +A K+ G +
Sbjct: 117 QLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQV 176
Query: 124 TYNTLINGLYRTGHTIVALNLFE----EMASGNG--------EFGVEGFVDKAKELFLQM 171
+Y TLINGL + G AL L + ++ N V+ A +L+ QM
Sbjct: 177 SYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQM 236
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+PD T S+I GFC EA LL +M+ + + P + TF++++D CK GK+
Sbjct: 237 VAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKV 296
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA +L + ++ + + YN+LMDG+CL +N+AK++F SM S G V SY+ +
Sbjct: 297 KEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTM 356
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
ING CK K ++ A++L+ EM + I P+VV YN+L L ++ ++ KL DEM G
Sbjct: 357 INGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQ 416
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ TY + +D LCKN ++ +A+ L L+ D+ Y LI GL
Sbjct: 417 PPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGL 465
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 176/351 (50%), Gaps = 24/351 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F ++ M+ R SP ++++G + + V L ++ + P +YT++IL++
Sbjct: 230 FDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAV-GLLHKMILENINPRMYTFSILVD 288
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
FCK G+V ++LG ++ + VT+ SL+ G C I +A +F + G
Sbjct: 289 AFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIA 348
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
NV +Y T+INGL + A+NLFEEM + I P+V
Sbjct: 349 NVQSYTTMINGLCKIKMVDEAVNLFEEM-----------------------RCRKIIPNV 385
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY S+I G + L+ EM D+G PN++T+N I+D LCKN +D+A LL
Sbjct: 386 VTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTN 445
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+ G+RP+ + Y L+ G C +G++ A+++F + G V++Y+++I G+C
Sbjct: 446 LKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGL 505
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
+ AL+L +M G P+ Y + + LFE + + A KL EM G+
Sbjct: 506 FDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGL 556
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 7/166 (4%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP + ++N + L KN H D ++L L G+ PD+YTY +LI C+ G++
Sbjct: 414 RGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLED 473
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
V +L + + T+T +I+G C + A AL +K+ GC PN TY +I
Sbjct: 474 AQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVIL 533
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI 176
L+ +A L EM + G +D+ ++L K+ +
Sbjct: 534 SLFEKDENDMAEKLLREMIA-------RGLLDEKSYIYLASKETGV 572
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 270 bits (691), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 152/446 (34%), Positives = 243/446 (54%), Gaps = 48/446 (10%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
+F M+ RP P + F+ L +AK +D V+SL +++ + G+ + YTY+ILINC
Sbjct: 67 ALFGEMVKSRPFPS-IIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINC 125
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
FC+ ++ VLG++++ + PN VT +SL+ G C RI EA AL ++ V G +PN
Sbjct: 126 FCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPN 185
Query: 122 VFTYNTLINGLY-----------------------------------RTGHTIVALNLFE 146
T+NTLI+GL+ + G T +A NL
Sbjct: 186 TVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLN 245
Query: 147 EMASGNGEFGV-------EGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+M G E GV +G +D A LF +M+ + I P+VVTY+S+I C
Sbjct: 246 KMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
W++A LL +M+++ + P+V TF+ ++D K GK+ EA +L D M++ + P+ Y+
Sbjct: 306 RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L++GFC+ R++ AK++F M S C V +Y+ LI G+CK K +E + ++ EM +
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 425
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+ + V YN L LF+ + A ++F EM DGV + TY T +DGLCKN + +A
Sbjct: 426 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ +F L+ K E I YN +I+G+
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGM 511
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 189/368 (51%), Gaps = 23/368 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N + L K KH D L+LFK + + G+ P++ TY+ LI+C C GR S +
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+ TF++LI E +++EA L+ ++ +P++ TY++LING
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING--- 370
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
F + +D+AK++F M ++ PDVVTY ++I+GFC
Sbjct: 371 --------------------FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 410
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
E + EM +G+ N VT+N+++ L + G D A + M+ GV PN YN
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+DG C G++ +A +F ++ T+++Y+I+I G CK ++E L+ + K
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 530
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+KPDVV YNT+ E A LF EM+ DG ++ Y T I ++ +
Sbjct: 531 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590
Query: 375 VELFRTLR 382
EL + +R
Sbjct: 591 AELIKEMR 598
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 131/296 (44%), Gaps = 14/296 (4%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V +F+ L K L+ + + P + TY+ LIN FC R+
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 71 GFVVLG-RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
+ + + CF P+ VT+ +LIKG C R+ E +F ++ G N TYN LI
Sbjct: 380 AKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENIN 177
GL++ G +A +F+EM S + G ++KA +F ++ +
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P + TY +I G C A + L + +GV+P+VV +N ++ C+ G +EA L
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
M + G PN+ YNTL+ G + EL M S G + ++ N
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 144/301 (47%), Gaps = 23/301 (7%)
Query: 99 AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE 158
+E ++ +A ALF ++ P++ ++ L++ + + V ++L E
Sbjct: 58 SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGE------------ 105
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
QM++ I + TY+ +I FC + A +L +MM G +PN+VT
Sbjct: 106 -----------QMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTL 154
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
+ +++ C + ++ EA L+D M G +PN +NTL+ G L + + A L M +
Sbjct: 155 SSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVA 214
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
GC + +Y +++NG CK + + A +L +M ++P V+IYNT+ L + ++
Sbjct: 215 KGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDD 274
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A LF EM+ G+ + TY + I LC +A L + K D+ ++ LID
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334
Query: 399 G 399
Sbjct: 335 A 335
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 122/240 (50%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A LF +M P ++ ++ ++ N ++ L +M + G+ N T+++
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C+ ++ A +L M+++G PN ++L++G+C + R++ A L M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
+++ LI+G + + A++L M++KG +PD+V Y + L + + AF
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
L ++M++ + Y T IDGLCK ++ +A+ LF+ + ++ Y+ LI L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 270 bits (690), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 151/445 (33%), Positives = 241/445 (54%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P + F+ L +AK +D V+SL +++ + G+ +LYTY+ILINCF
Sbjct: 68 LFGDMVKSRPFPS-IVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCF 126
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM------------------ 104
C+ ++S VL ++++ + P+ VT SL+ G C +RI
Sbjct: 127 CRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDS 186
Query: 105 -----------------EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
EA AL ++ V GC+P++ TY ++NGL + G +AL+L ++
Sbjct: 187 FTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKK 246
Query: 148 MASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M G E GV + V+ A LF +M ++ I P+VVTY S+IR C
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++A LL +M+++ + PNVVTF+ ++D K GK+ EA +L D MI+ + P+ F Y++
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 366
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L++GFC+ R++ AK +F M S C V +Y+ LI G+CK K ++ + L+ EM +G
Sbjct: 367 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG 426
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ + V Y TL F+ + + A +F +M DGV D TY +DGLC N + A+
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL 486
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
+F L+ K E DI YN +I+G+
Sbjct: 487 VVFEYLQRSKMEPDIYTYNIMIEGM 511
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 184/368 (50%), Gaps = 23/368 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N + L K+ + L+LF +++ G+ P++ TYN LI C C GR S +
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ PN VTF++LI E +++EA L+ ++ +P++FTY++LING
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING--- 370
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
F + +D+AK +F M ++ P+VVTY ++I+GFC A
Sbjct: 371 --------------------FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+E L EM +G+ N VT+ ++ + + D A + M+ GV P+ Y+
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYS 470
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DG C G+V A +F ++ +++Y+I+I G CK ++E L+ + K
Sbjct: 471 ILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 530
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+KP+VV Y T+ E A LF EM+ +G D+ TY T I ++ +
Sbjct: 531 GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAAS 590
Query: 375 VELFRTLR 382
EL R +R
Sbjct: 591 AELIREMR 598
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 124/276 (44%), Gaps = 24/276 (8%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
++D M+ R P + +++ L + D +F+ + S FP++ TYN LI F
Sbjct: 348 LYDEMIK-RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 406
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK RV G + + + N VT+T+LI G A +F ++ G P++
Sbjct: 407 CKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDI 466
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TY+ L++GL G AL +FE ++ ++K + PD+ T
Sbjct: 467 MTYSILLDGLCNNGKVETALVVFE-------------YLQRSK----------MEPDIYT 503
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I G C A + L + +GV+PNVVT+ +M C+ G +EA L M
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMK 563
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
+ G P++ YNTL+ G + EL M S
Sbjct: 564 EEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 116/237 (48%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A LF M P +V ++ ++ N ++ L +M + G+ N+ T+++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C+ ++ A +L M+++G P+ N+L++GFC R++ A L M MG
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
F+++ LI+G ++ A++L M+ KG +PD+V Y + L + ++ A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
L +M++ + Y T ID LC + +A+ LF + ++ YN LI
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 101/204 (49%)
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
++A L +M+ P++V F+ ++ + K K D L + M +G+ N + Y+ L
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
++ FC +++ A + M +G + + + L+NG+C I A+SL G+M+ G
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+PD +NTL LF ++ A L D M G D TY ++GLCK I A+
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
L + + K E + YN +ID L
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDAL 266
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 91/171 (53%)
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+D+A L M++ P+ ++ L+ + + L M+++G +H +++YS
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
ILIN +C+ ++ AL++ +M+ G +PD+V N+L +++ A L +M
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G D++T+ T I GL +++ EAV L + + C+ D+ Y +++GL
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL 231
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 152/446 (34%), Positives = 240/446 (53%), Gaps = 48/446 (10%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
+F M+ RP P + F+ L +AK +D V+SL +++ + G+ + YTY+ILINC
Sbjct: 67 ALFGEMVKSRPFPS-IIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINC 125
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
FC+ ++ VLG++++ + PN VT +SL+ G C RI EA AL ++ V G +PN
Sbjct: 126 FCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPN 185
Query: 122 VFTYNTLINGLY-----------------------------------RTGHTIVALNLFE 146
T+NTLI+GL+ + G T +A L
Sbjct: 186 TVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLN 245
Query: 147 EMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+M G E GV +D A LF +M+ + I P+VVTY+S+I C
Sbjct: 246 KMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
W++A LL +M+++ + P+V TF+ ++D K GK+ EA +L D M++ + P+ Y+
Sbjct: 306 RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L++GFC+ R++ AK++F M S C V SYS LI G+CK K ++ + L+ EM +
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQR 425
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+ + V Y TL LF+ + A ++F EM DGV + TY T +DGLCKN + +A
Sbjct: 426 GLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ +F L+ K E I YN +I+G+
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGM 511
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 190/368 (51%), Gaps = 23/368 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + + L KNKH D L+LFK + + G+ P++ TY+ LI+C C GR S +
Sbjct: 254 PGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+ TF++LI E +++EA L+ ++ +P++ TY++LING
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING--- 370
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
F + +D+AK++F M ++ PDVV+Y+++I+GFC A
Sbjct: 371 --------------------FCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAK 410
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+E L EM +G+ N VT+ ++ L + G D A + M+ GV PN YN
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+DG C G++ +A +F ++ T+++Y+I+I G CK ++E L+ + K
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 530
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+KPDVV YNT+ E A LF EM+ DG ++ Y T I ++ +
Sbjct: 531 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590
Query: 375 VELFRTLR 382
EL + +R
Sbjct: 591 AELIKEMR 598
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 163/333 (48%), Gaps = 23/333 (6%)
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
++ + G +++S P+ + F+ L+ + ++ +L +++ G N +TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
LIN R +AL + +M + G E P++VT +S+
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMM----KLGYE-------------------PNIVTLSSL 157
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
+ G+C++ +EA L+ +M G QPN VTFN ++ L + K EA L+D M+ G
Sbjct: 158 LNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGC 217
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+P+ Y +++G C G + A L ME V Y+ +I+G CKNK ++ AL+
Sbjct: 218 QPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALN 277
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L+ EM +KGI+P+VV Y++L L + A +L +M + D +T+ ID
Sbjct: 278 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 337
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
K +VEA +L+ + + I Y+ LI+G
Sbjct: 338 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 370
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 132/296 (44%), Gaps = 14/296 (4%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V +F+ L K L+ + + P + TY+ LIN FC R+
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 71 GFVVLG-RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
+ + + CF P+ V++++LIKG C R+ E LF ++ G N TY TLI
Sbjct: 380 AKQMFEFMVSKHCF-PDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENIN 177
GL++ G +A +F+EM S + G ++KA +F ++ +
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P + TY +I G C A + L + +GV+P+VV +N ++ C+ G +EA L
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
M + G PN+ YNTL+ G + EL M S G + ++ N
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 129/253 (50%), Gaps = 2/253 (0%)
Query: 145 FEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
+ E S NG ++ +D A LF +M P ++ ++ ++ N ++ L
Sbjct: 48 YREKLSRNGLSELK--LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGE 105
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
+M + G+ N T++++++ C+ ++ A +L M+++G PN ++L++G+C +
Sbjct: 106 QMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSK 165
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
R++ A L M G +++ LI+G + + A++L M++KG +PD+V Y
Sbjct: 166 RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYG 225
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
+ L + + AF L ++M++ + Y T IDGLCKN ++ +A+ LF+ +
Sbjct: 226 VVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETK 285
Query: 385 KCELDIRAYNCLI 397
++ Y+ LI
Sbjct: 286 GIRPNVVTYSSLI 298
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 149/413 (36%), Positives = 231/413 (55%), Gaps = 14/413 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F M+ +P P V SF+ L L KHY +V+SLF+ ++ + + +I++N
Sbjct: 57 FSLFRQMVRTKPLPS-VVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVN 115
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCE 119
C M R GF VL + N V F +L++GL AE+++ +A LF KL R CE
Sbjct: 116 SCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICE 175
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKEL 167
PN Y T++NGL + GHT A +L M G+ + F +G +D A L
Sbjct: 176 PNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSL 235
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
+MK ++I PD+ TY+++I C + W + L +EM+ + PNV TFN ++D LCK
Sbjct: 236 LNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCK 295
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
GK+++A ++ MI+ GV P+ YN ++DG+ L G+V+RA+E+F SM + + S
Sbjct: 296 EGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIIS 355
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y+ILINGY + K+I+ A+ + E+ KG+KP +V N L LFE+ + + A FDEM
Sbjct: 356 YNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEML 415
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G D +T+ T + G KN + EA+ F L + + +I+ Y +IDGL
Sbjct: 416 SAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGL 468
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 197/394 (50%), Gaps = 15/394 (3%)
Query: 20 FNILF-GCLAKNKHYDTVLSLFKRLNSTGL-FPDLYTYNILINCFCKMGRVSHGFVVLGR 77
FN L G A+NK D V LFK+L + P+ Y ++N CK G F +L
Sbjct: 145 FNTLLRGLFAENKVKDAV-HLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRL 203
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
+ + PN ++ +I C + + A +L +++ P++FTY+TLI+ L +
Sbjct: 204 MEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQ 263
Query: 138 ---------TIVALNLFEEMASGNGEFG---VEGFVDKAKELFLQMKDENINPDVVTYTS 185
++ LN++ + + N EG V+ A+E+ M ++ ++PDV+TY
Sbjct: 264 WENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNM 323
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I G+ + A+ + M+++ ++PN++++N++++ + K+DEA ++ + Q G
Sbjct: 324 IIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKG 383
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
++P+ N L+ G GR A+ F M S G ++++ L+ GY KN +E A+
Sbjct: 384 LKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAM 443
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
S + ++ + ++ IY + L + ++++A F+++ G+ D TY I G
Sbjct: 444 SHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGY 503
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
C+ + EA ++ R + C D R YN ++ G
Sbjct: 504 CQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRG 537
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 180/367 (49%), Gaps = 23/367 (6%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++ + P C ++I+ K+ D SL + + PD++TY+ LI+ CK+
Sbjct: 203 LMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLS 262
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ + + ++ PN TF S+I GLC E ++ +A + + G +P+V TYN
Sbjct: 263 QWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYN 322
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
+I+G +G+ G VD+A+E+F M +++I P++++Y +
Sbjct: 323 MIIDG-----------------------YGLRGQVDRAREIFDSMINKSIEPNIISYNIL 359
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G+ +EA + E+ +G++P++VT NV++ L + G+ A D M+ G
Sbjct: 360 INGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGH 419
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+ + + TL+ G+ G V A F +E + Y+ +I+G CKN +++ A +
Sbjct: 420 IPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHA 479
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
+ ++ G+ PDV+ Y + + ++ A + +M+ +G AD TY + G
Sbjct: 480 TFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFL 539
Query: 367 KNSYIVE 373
+++ + E
Sbjct: 540 RSNKVSE 546
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 123/292 (42%), Gaps = 42/292 (14%)
Query: 150 SGNGEFGVEGF------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
S G FGV +D A LF QM P VV+++ +++ + ++ L
Sbjct: 36 SVKGNFGVSNEFENVKCLDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLF 95
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL------- 256
E+ + + +++++ C + D +L + + G+ N ++NTL
Sbjct: 96 REIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAE 155
Query: 257 -----------------------------MDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
M+G C G +A +L ME
Sbjct: 156 NKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCI 215
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
YSI+I+ +CK+ ++GA SL EM K I PD+ Y+TL L ++ Q E LF EM
Sbjct: 216 YSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMI 275
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + T+ + IDGLCK + +A E+ R + + D+ YN +IDG
Sbjct: 276 HLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDG 327
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/412 (35%), Positives = 233/412 (56%), Gaps = 15/412 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSL--FKRLNSTGLFPDLYTYNILIN 60
+F M+ RP P + FN L +AK K +D V+SL ++ G P + T + L+N
Sbjct: 29 LFGGMVKSRPLPS-IFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLN 87
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+C R+S ++ +++ + P+ +TFT+LI GL ++ EA AL ++ GC+P
Sbjct: 88 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 147
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELF 168
N+ TY ++NGL + G +A NL +M + E V F VD A LF
Sbjct: 148 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 207
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+M+ + I P+VVTY+S+I C W++A LL +M+++ + PN+VTFN ++D K
Sbjct: 208 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 267
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
GK EA +L D MI+ + P+ F YN+L++GFC+ R+++AK++F M S C + +Y
Sbjct: 268 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 327
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ LI G+CK+K +E L+ EM +G+ D V Y TL LF + A K+F +M
Sbjct: 328 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 387
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
DGV D TY +DGLC N + +A+E+F ++ + +LDI Y +I+G+
Sbjct: 388 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 439
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 185/366 (50%), Gaps = 23/366 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V FN + L K +H D L+LFK + + G+ P++ TY+ LI+C C GR S +L
Sbjct: 184 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 243
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ PN VTF +LI E + +EA L + +P++FTYN+LING
Sbjct: 244 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING----- 298
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
F + +DKAK++F M ++ PD+ TY ++I+GFC +
Sbjct: 299 ------------------FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRV 340
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+ L EM +G+ + VT+ ++ L +G D A ++ M+ GV P+ Y+ L
Sbjct: 341 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 400
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG C G++ +A E+F M+ ++ Y+ +I G CK +++ L+ + KG+
Sbjct: 401 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 460
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
KP+VV YNT+ L ++ A+ L +M+ DG D+ TY T I ++ + E
Sbjct: 461 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 520
Query: 377 LFRTLR 382
L R +R
Sbjct: 521 LIREMR 526
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 69/137 (50%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + +++IL L N + L +F + + + D+Y Y +I CK G+V G+
Sbjct: 391 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 450
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ + PN VT+ ++I GLC++ + EA AL K++ G P+ TYNTLI
Sbjct: 451 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 510
Query: 134 RTGHTIVALNLFEEMAS 150
R G + L EM S
Sbjct: 511 RDGDKAASAELIREMRS 527
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 145/409 (35%), Positives = 227/409 (55%), Gaps = 12/409 (2%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+++L+ + P + F + G L K HY V+SL +++ G+ +L T +ILINCF
Sbjct: 56 FNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFS 115
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
++G S F V IL+ + P+A+T T+LIKGLC + I +A K+ G + N
Sbjct: 116 QLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQV 175
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
+Y TLINGL + G T AL + + V + V+ A + + +M
Sbjct: 176 SYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEM 235
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I P VVTY ++I G C +A LL +M+ + + P V TF++++D CK GK+
Sbjct: 236 VAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKV 295
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA + +M++ V+PN YN+LM+G+CL VN+A+ +F +M +G V SYSI+
Sbjct: 296 KEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIM 355
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I+G+CK K ++ A+ L+ EM K I PDVV YN+L L + ++ A KL EM G
Sbjct: 356 ISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQ 415
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ TY + +D LCKN ++ +A+EL L+ + + YN LI+GL
Sbjct: 416 PPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGL 464
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 197/390 (50%), Gaps = 25/390 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFG-CLAKNKH-----YDTVLSLFKRLNSTGLFPDLYT 54
F +F +L P + ++ G CL + H +D VL+L +LN +
Sbjct: 124 FSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQV-------S 176
Query: 55 YNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLR 114
Y LIN CK+G+ +L RI + V + ++I G+C + + +A ++++
Sbjct: 177 YRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMV 236
Query: 115 VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVD 162
P V TYNTLI GL G A+ L +M N F EG V
Sbjct: 237 AKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVK 296
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
+AK +F+ M +++ P++VTY S++ G+C N+ N+A+ + M GV P+V ++++++
Sbjct: 297 EAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMI 356
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
CK +DEA +L + M + P+ YN+L+DG C +GR++ A +L M G
Sbjct: 357 SGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQP 416
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
+ +Y+ L++ CKN ++ A+ L ++ I+P V YN L L + +++ A K+
Sbjct: 417 PNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKV 476
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
F+++ +G D +TY T I G CK +++
Sbjct: 477 FEDVLVNGYNIDVYTYNTMIKGFCKKGFVI 506
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 145/409 (35%), Positives = 229/409 (55%), Gaps = 12/409 (2%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+++L + PP FN + L K KH+ T LSL +++ G+ D +T+NILINCF
Sbjct: 48 FNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFS 107
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
++G S F + +IL+ + P A+TF +LIKGLC + I +A K+ G +
Sbjct: 108 QLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQV 167
Query: 124 TYNTLINGLYRTGHTIVALNLFE----EMASGNG--------EFGVEGFVDKAKELFLQM 171
+Y TLINGL + G AL L + ++ N V+ A +L+ QM
Sbjct: 168 SYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQM 227
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I PDV TY ++I GF + N A L +M + + PNV TFN+++D CK GK+
Sbjct: 228 VAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKV 287
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
++A +L +M++ ++P+ YN+LMDG+C +VN+AK++F SM S G V Y+ +
Sbjct: 288 NDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTM 347
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
+NG+CK K ++ A++L+ EM + I P+VV Y++L L ++ ++ A KL DEM G
Sbjct: 348 VNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQ 407
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ TY + +D LCKN ++ +A+ L L+ D+ Y LI GL
Sbjct: 408 PPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGL 456
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 173/332 (52%), Gaps = 23/332 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L + + + LF ++ + P++YT+NIL++ FCK G+V+ VV
Sbjct: 234 PDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVV 293
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ P+ VT+ SL+ G C+ +++ +A +F + G NV Y T++NG +
Sbjct: 294 LAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCK 353
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
A+NLFEEM + I P+VVTY+S+I G C
Sbjct: 354 IKMVDEAINLFEEM-----------------------RCRKIIPNVVTYSSLIDGLCKLG 390
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
A L+ EM D+G PN+VT++ I+D LCKN +D+A LL + G+RP+ + Y
Sbjct: 391 RIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYT 450
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ G C +GR+ A+ +F + G V++Y+++I G+C + AL+L +M
Sbjct: 451 ILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDN 510
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
G P+ Y + + LFE + + A KL EM
Sbjct: 511 GCIPNAKTYELVILSLFEKDENDTAEKLLREM 542
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 197/428 (46%), Gaps = 48/428 (11%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F IF +L + P +FN L L H L ++ + G D +Y LIN
Sbjct: 116 FSIFAKILK-KGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLIN 174
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK+GR++ +L R+ PNAV + +I +C + +A L++++ P
Sbjct: 175 GLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICP 234
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELF 168
+VFTYN LI+G A++LF +M N F EG V+ AK +
Sbjct: 235 DVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVL 294
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL------------------------I 204
M ++I PDVVTY S++ G+C N N+AK + I
Sbjct: 295 AIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKI 354
Query: 205 EMMDQGVQ-----------PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+M+D+ + PNVVT++ ++D LCK G++ A +L+D M G PN Y
Sbjct: 355 KMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTY 414
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
++++D C V++A L +++ G +++Y+ILI G C++ +E A +++ ++L
Sbjct: 415 SSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLV 474
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG DV Y + + ++A L +M+ +G + TY I L +
Sbjct: 475 KGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDT 534
Query: 374 AVELFRTL 381
A +L R +
Sbjct: 535 AEKLLREM 542
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 150/410 (36%), Positives = 230/410 (56%), Gaps = 13/410 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ ML MRP PPP FN + L K + + T +SL K L+ G+ DL T NILINCF
Sbjct: 56 LFNRMLLMRP-PPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCF 114
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +G+++ F VL IL+ + P+ +T T+LIKGLC + +A + + +
Sbjct: 115 CHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDR 174
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
+Y TLINGL + G T A+ L + + + V V +A L+ +
Sbjct: 175 ISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSE 234
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + I P+VVTYT++I GFC EA LL EM + + P+V TF++++D L K GK
Sbjct: 235 MNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGK 294
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
M A +L +M++ V+P+ YN+L+DG+ L V AK +F SM G T V SY+I
Sbjct: 295 MKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTI 354
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+I+G CK K ++ A+SL+ EM K + P+ + +N+L L + ++ + L D+M+
Sbjct: 355 MIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRS 414
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
AD TY + ID LCKN ++ +A+ LF+ + + + D+ Y LIDGL
Sbjct: 415 QLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGL 464
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 180/356 (50%), Gaps = 12/356 (3%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
L R P V +NI+ L KNK +L+ +N+ ++P++ TY LI FC MG
Sbjct: 200 LEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGC 259
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ +L + P+ TF+ LI L E ++ A + + +P+V TYN+
Sbjct: 260 LIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNS 319
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDEN 175
L++G + A +F MA GV+ + VD+A LF +MK +N
Sbjct: 320 LVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKN 379
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+ P+ +T+ S+I G C + L+ +M D+ +V+T++ ++D LCKN +D+A
Sbjct: 380 VIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAI 439
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
L MI ++P+ + Y L+DG C GR+ A+E+F + G + +Y+++I+G+
Sbjct: 440 ALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGF 499
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
CK + AL+L +M G P+ + ++ + LFE + ++A KL EM G+
Sbjct: 500 CKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGL 555
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 172/364 (47%), Gaps = 23/364 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S+ L L K + L + L + PD+ YNI+I+ CK V + +
Sbjct: 176 SYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEM 235
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PN VT+T+LI G C ++EA AL ++++ P+V+T++ LI+ L
Sbjct: 236 NAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDAL------ 289
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
G EG + AK + M + PDVVTY S++ G+ N+
Sbjct: 290 -----------------GKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKH 332
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
AK + M GV P V ++ +++D LCK +DEA L + M V PN +N+L+D
Sbjct: 333 AKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLID 392
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G C +GR+ +L M V +YS LI+ CKN ++ A++L+ +M+++ I+P
Sbjct: 393 GLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQP 452
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
D+ Y L L + +++ A ++F + G D TY I G CK EA+ L
Sbjct: 453 DMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALL 512
Query: 379 RTLR 382
+
Sbjct: 513 SKME 516
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 91/206 (44%)
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
ND N+A L M+ P FN I+ L K + A L + G+ +
Sbjct: 48 NDHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTL 107
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N L++ FC G++ + + ++ G V + + LI G C E++ AL + ++++
Sbjct: 108 NILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVA 167
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+ D + Y TL L +I + + A +L ++ + D Y ID LCKN + E
Sbjct: 168 LEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGE 227
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
A L+ + + ++ Y LI G
Sbjct: 228 ACNLYSEMNAKQIYPNVVTYTTLIYG 253
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 80/169 (47%)
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
++A L + M+ + P F +N ++ R A L ++ G T + + +IL
Sbjct: 51 NDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNIL 110
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
IN +C +I + S+ +L +G PDV+ TL L +V++A K D++
Sbjct: 111 INCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEF 170
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D +Y T I+GLCK A++L R L + D+ YN +ID L
Sbjct: 171 QLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSL 219
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 150/445 (33%), Positives = 238/445 (53%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ M+ RP P P+ FN L +A+ K YD VL K + G+ D+YT I+INC+
Sbjct: 57 LFESMIQSRPLPTPI-DFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCY 115
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL--------- 113
C+ ++ F VLGR + + P+ +TF++L+ G C E R+ EA AL ++
Sbjct: 116 CRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDL 175
Query: 114 --------------RV------------FGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
RV +G +P+ TY ++N L ++G++ +AL+LF +
Sbjct: 176 VTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRK 235
Query: 148 MASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M N + V +G D A LF +M+ + I DVVTY+S+I G C
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++ +L EM+ + + P+VVTF+ ++D K GK+ EA L + MI G+ P+ YN+
Sbjct: 296 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 355
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L+DGFC ++ A ++F M S GC + +YSILIN YCK K ++ + L+ E+ SKG
Sbjct: 356 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ P+ + YNTL + + ++ A +LF EM GV TY +DGLC N + +A+
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
E+F ++ + L I YN +I G+
Sbjct: 476 EIFEKMQKSRMTLGIGIYNIIIHGM 500
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/407 (31%), Positives = 203/407 (49%), Gaps = 13/407 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M+ M+ P V ++ G K + L L R+ G PD TY ++N
Sbjct: 162 LVDRMVEMKQRPDLVTVSTLINGLCLKGR-VSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G + + ++ + V ++ +I LC + +A +LF ++ + G + +V
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
TY++LI GL G + EM N F EG + +AKEL+ +
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M I PD +TY S+I GFC N +EA + M+ +G +P++VT++++++ CK +
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+D+ RL + G+ PN YNTL+ GFC +G++N AKELF M S G +V +Y I
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L++G C N E+ AL ++ +M + + IYN + + +V+ A+ LF + G
Sbjct: 461 LLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 520
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
V D TY I GLCK + EA LFR ++ C D YN LI
Sbjct: 521 VKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 192/390 (49%), Gaps = 23/390 (5%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R V ++I+ L K+ +D LSLF + G+ D+ TY+ LI C G+
Sbjct: 239 RNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDD 298
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
G +L ++ P+ VTF++LI E +++EA L+ ++ G P+ TYN+LI+
Sbjct: 299 GAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID 358
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
G F E + +A ++F M + PD+VTY+ +I +
Sbjct: 359 G-----------------------FCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C A ++ L E+ +G+ PN +T+N ++ C++GK++ A L M+ GV P+
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
Y L+DG C G +N+A E+F M+ T + Y+I+I+G C +++ A SL+
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 515
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
+ KG+KPDVV YN + L + + A LF +M+ DG D +TY I S
Sbjct: 516 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 575
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++ +VEL +++ D +ID L
Sbjct: 576 LISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M++ R PP V ++ IL L N + L +F+++ + + + YNI+I+
Sbjct: 442 LFQEMVS-RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 500
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +V + + + P+ VT+ +I GLC + + EA LF K++ GC P+
Sbjct: 501 CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 560
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEM 148
FTYN LI I ++ L EEM
Sbjct: 561 FTYNILIRAHLGGSGLISSVELIEEM 586
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 4/159 (2%)
Query: 224 ELCKNG----KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
E +NG K+++A L + MIQ P +N L T + + ME
Sbjct: 40 ERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELN 99
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G H +++ +I+IN YC+ K++ A S+ G G +PD + ++TL +V A
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
L D M D T T I+GLC + EA+ L
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLI 198
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 148/409 (36%), Positives = 229/409 (55%), Gaps = 13/409 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F ++ M P P V FN++ G + K KHY T +SL K++ G+ P + T +ILINC+
Sbjct: 65 LFTRLITMHPLPS-VVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCY 123
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +G + F VLG +L+ + NA+T T+++KGLC + +A + G +
Sbjct: 124 CHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDE 183
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
TY TLINGL + G T A L +M V +G V +A++L+
Sbjct: 184 VTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSD 243
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ I+PDV TYT +I GFC W E LL +M+D+ V NV T+N+++D LCK G
Sbjct: 244 VVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGM 303
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ +A + +LMI+ G RP+ +NTLM G+CL V A++LF + G T V+SY+I
Sbjct: 304 LGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNI 363
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI GYCKN I+ ALSL+ +M K + P++V Y++L L + ++ A++LF + G
Sbjct: 364 LIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGG 423
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + TY +D LCK + +A+ELF + ++ +YN LI+G
Sbjct: 424 PSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILING 472
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 192/382 (50%), Gaps = 12/382 (3%)
Query: 30 NKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVT 89
N L + + G D TY LIN CK+G F +L ++ PN V
Sbjct: 161 NGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVI 220
Query: 90 FTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
+ ++ GLC + + EA L++ + G +P+VFTY LI+G G L +M
Sbjct: 221 YNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMV 280
Query: 150 SGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
N V +G + KA ++ M + PD+VT+ +++ G+C ND
Sbjct: 281 DRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVV 340
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
EA+ L + G+ P+V ++N+++ CKN ++DEA L + M + PN Y++L+
Sbjct: 341 EARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLI 400
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
DG C +GR++ A ELF ++ G + V +Y+I+++ CK + ++ A+ L+ M +G+
Sbjct: 401 DGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLT 460
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
P+V YN L + +++ A LF+EM R + D+ TY IDGLCK+ I A EL
Sbjct: 461 PNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWEL 520
Query: 378 FRTLRILKCELDIRAYNCLIDG 399
F + +D+ YN L D
Sbjct: 521 FNVMHDGGPPVDVITYNILFDA 542
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 153/345 (44%), Gaps = 47/345 (13%)
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN---------- 152
I +A ALFT+L P+V +N ++ + + H A++L ++M
Sbjct: 59 IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118
Query: 153 --------GEFG-----------------------------VEGFVDKAKELFLQMKDEN 175
G G + G V KA E + +
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
D VTY ++I G C EA LL +M Q V+PNVV +N+I+D LCK+G + EA
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
L ++ G+ P+ F Y L+ GFC G+ L M V++Y+ILI+
Sbjct: 239 DLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDAL 298
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
CK + A + M+ +G +PD+V +NTL + V A KLFD G+ D
Sbjct: 299 CKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDV 358
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
W+Y I G CKN+ I EA+ LF + K +I Y+ LIDGL
Sbjct: 359 WSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGL 403
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 102/213 (47%), Gaps = 23/213 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+NIL KN D LSLF ++N L P++ TY+ LI+ CK GR+S+ + +
Sbjct: 356 PDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWEL 415
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
I +PN +T+ ++ LC + +A LF + G PNV +YN LING +
Sbjct: 416 FSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCK 475
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ A+NLFEEM N+ PD VTY +I G C +
Sbjct: 476 SKRIDEAMNLFEEMHR-----------------------RNLVPDSVTYNCLIDGLCKSG 512
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
+ A L M D G +V+T+N++ D K
Sbjct: 513 RISHAWELFNVMHDGGPPVDVITYNILFDAFSK 545
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 69/137 (50%), Gaps = 1/137 (0%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F + + PSP V ++NI+ L K + D + LF + GL P++ +YNILIN +
Sbjct: 415 LFSAIHDGGPSPN-VITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGY 473
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK R+ + + R P++VT+ LI GLC RI A LF + G +V
Sbjct: 474 CKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDV 533
Query: 123 FTYNTLINGLYRTGHTI 139
TYN L + + H I
Sbjct: 534 ITYNILFDAFSKIQHVI 550
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+N + P + +++ L L K+ LF ++ G P++ TYNI+++ CK+
Sbjct: 384 MNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQL 443
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V + + TPN ++ LI G C RI EA LF ++ P+ TYN
Sbjct: 444 VDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNC 503
Query: 128 LINGLYRTGHTIVALNLFEEMASG 151
LI+GL ++G A LF M G
Sbjct: 504 LIDGLCKSGRISHAWELFNVMHDG 527
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 150/445 (33%), Positives = 238/445 (53%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ M+ RP P P+ FN L +A+ K YD VL K + G+ D+YT I+INC+
Sbjct: 86 LFESMIQSRPLPTPI-DFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCY 144
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL--------- 113
C+ ++ F VLGR + + P+ +TF++L+ G C E R+ EA AL ++
Sbjct: 145 CRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDL 204
Query: 114 --------------RV------------FGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
RV +G +P+ TY ++N L ++G++ +AL+LF +
Sbjct: 205 VTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRK 264
Query: 148 MASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M N + V +G D A LF +M+ + I DVVTY+S+I G C
Sbjct: 265 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 324
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++ +L EM+ + + P+VVTF+ ++D K GK+ EA L + MI G+ P+ YN+
Sbjct: 325 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 384
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L+DGFC ++ A ++F M S GC + +YSILIN YCK K ++ + L+ E+ SKG
Sbjct: 385 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 444
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ P+ + YNTL + + ++ A +LF EM GV TY +DGLC N + +A+
Sbjct: 445 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 504
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
E+F ++ + L I YN +I G+
Sbjct: 505 EIFEKMQKSRMTLGIGIYNIIIHGM 529
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/407 (31%), Positives = 203/407 (49%), Gaps = 13/407 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M+ M+ P V ++ G K + L L R+ G PD TY ++N
Sbjct: 191 LVDRMVEMKQRPDLVTVSTLINGLCLKGR-VSEALVLIDRMVEYGFQPDEVTYGPVLNRL 249
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G + + ++ + V ++ +I LC + +A +LF ++ + G + +V
Sbjct: 250 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 309
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
TY++LI GL G + EM N F EG + +AKEL+ +
Sbjct: 310 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 369
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M I PD +TY S+I GFC N +EA + M+ +G +P++VT++++++ CK +
Sbjct: 370 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 429
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+D+ RL + G+ PN YNTL+ GFC +G++N AKELF M S G +V +Y I
Sbjct: 430 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 489
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L++G C N E+ AL ++ +M + + IYN + + +V+ A+ LF + G
Sbjct: 490 LLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 549
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
V D TY I GLCK + EA LFR ++ C D YN LI
Sbjct: 550 VKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 596
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 192/390 (49%), Gaps = 23/390 (5%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R V ++I+ L K+ +D LSLF + G+ D+ TY+ LI C G+
Sbjct: 268 RNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDD 327
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
G +L ++ P+ VTF++LI E +++EA L+ ++ G P+ TYN+LI+
Sbjct: 328 GAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID 387
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
G F E + +A ++F M + PD+VTY+ +I +
Sbjct: 388 G-----------------------FCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 424
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C A ++ L E+ +G+ PN +T+N ++ C++GK++ A L M+ GV P+
Sbjct: 425 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 484
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
Y L+DG C G +N+A E+F M+ T + Y+I+I+G C +++ A SL+
Sbjct: 485 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 544
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
+ KG+KPDVV YN + L + + A LF +M+ DG D +TY I S
Sbjct: 545 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 604
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++ +VEL +++ D +ID L
Sbjct: 605 LISSVELIEEMKVCGFSADSSTIKMVIDML 634
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M++ R PP V ++ IL L N + L +F+++ + + + YNI+I+
Sbjct: 471 LFQEMVS-RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 529
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +V + + + P+ VT+ +I GLC + + EA LF K++ GC P+
Sbjct: 530 CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 589
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEM 148
FTYN LI I ++ L EEM
Sbjct: 590 FTYNILIRAHLGGSGLISSVELIEEM 615
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 4/159 (2%)
Query: 224 ELCKNG----KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
E +NG K+++A L + MIQ P +N L T + + ME
Sbjct: 69 ERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELN 128
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G H +++ +I+IN YC+ K++ A S+ G G +PD + ++TL +V A
Sbjct: 129 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 188
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
L D M D T T I+GLC + EA+ L
Sbjct: 189 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLI 227
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 146/409 (35%), Positives = 228/409 (55%), Gaps = 24/409 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+ L + ++ LF + G+ PD+ T ++LI+ CK G+V +
Sbjct: 335 PDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKL 394
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ P+ VT T+L+KGLC + RI +A LF K++ GC PNV T TL+ GL +
Sbjct: 395 LEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQ 454
Query: 135 TGHTIVALNLFEEMASGNGEFGVE------------------GFVDKAKELFLQMKDENI 176
+G+ +AL L + M S +G+ G D+A+ELF +MK +
Sbjct: 455 SGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGV 514
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
PDV++YTS+I GFC + W +AK L EM+D GVQP+V TF+V++D LCK GK+ EA+
Sbjct: 515 IPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANE 574
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
LL++MIQ G PN Y TL+ G C+ R++ A +LF+ M+ +GC V +Y L+ G C
Sbjct: 575 LLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLC 634
Query: 297 KNKEIEGALSLYGEMLSK------GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+ I+ AL L+ +MLS KPDV+ Y+ + L + + + A +LF EM+ G
Sbjct: 635 QTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALG 694
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
V + +Y + I G C++ + +A LF + +L+ Y+ +I G
Sbjct: 695 VIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHG 743
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 147/445 (33%), Positives = 239/445 (53%), Gaps = 59/445 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S++I+ L K++ D LFK + + G+ PD+ +Y LI+ FC+ G+ +
Sbjct: 119 PTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCL 178
Query: 75 LGRIL----RSCFTPNA-------------------------------VTFTSLIKGLCA 99
+L RS T ++ VT+++LIKGLC
Sbjct: 179 FNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCM 238
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV-- 157
+ RI EA LF ++ GC P+ Y TL+ GL +TG+ AL L +EM + G +G+
Sbjct: 239 KHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKC 298
Query: 158 -----------EGFV-----DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
+G D+A+ELF +MK + I PDV++YT++I GFC + W +AKC
Sbjct: 299 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKC 358
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
L EM+D G+QP+V T +V++D LCK GK+ EA++LL+++IQ G P+ TL+ G C
Sbjct: 359 LFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLC 418
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK----GI- 316
+ R+++A +LF+ M+ +GC V + + L+ G C++ I+ AL L+ MLS GI
Sbjct: 419 MKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGIN 478
Query: 317 -KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
KP+ + Y+ + L + + + A +LF EM+ GV D +Y + I G C++ +A
Sbjct: 479 CKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAK 538
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
LF + + + D+ ++ LID L
Sbjct: 539 YLFNEMVDIGVQPDVTTFSVLIDML 563
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 144/413 (34%), Positives = 218/413 (52%), Gaps = 59/413 (14%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G+ PD+ T +LI+ FCK G+V +L +++ + VT+++LIKGLC + RI EA
Sbjct: 5 GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEA 64
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV--------- 157
LF ++ GC P+ Y TL+ GL +TG +AL+L +EM + ++G+
Sbjct: 65 TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSY 124
Query: 158 ----EGFV-----DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD 208
+G D+A+ELF +MK + + PDV++YTS+I GFC + W +AKCL EM+D
Sbjct: 125 SIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD 184
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ------------------------- 243
G++ +V T ++++D LCK GK+ EA+ LL++MIQ
Sbjct: 185 VGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISE 244
Query: 244 ----------IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM------ESMGCTHTVFS 287
+G RP+A Y TLM G C TG +N A +L M + C T+ S
Sbjct: 245 ATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLIS 304
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
YSI+I+G CK++ + A L+ EM ++GI PDV+ Y TL + E+A LF+EM
Sbjct: 305 YSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEML 364
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G+ D T ID LCK ++EA +L + C D+ L+ GL
Sbjct: 365 DVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGL 417
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 125/409 (30%), Positives = 202/409 (49%), Gaps = 26/409 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV-- 74
+ +++ L L LF + G PD Y L+ C+ G ++ +
Sbjct: 226 IVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQ 285
Query: 75 -----LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
GR C P ++++ +I GLC + R EA LF +++ G P+V +Y TLI
Sbjct: 286 EMLNDTGRYGIKC-KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLI 344
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENIN 177
+G +G A LF EM + V +G V +A +L +
Sbjct: 345 HGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCI 404
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
PDVVT T++++G C + ++A L ++M G PNVVT +M LC++G + A L
Sbjct: 405 PDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALEL 464
Query: 238 LDLMIQ------IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
M+ I +PNA Y+ ++DG C GR + A+ELF M+++G V SY+ L
Sbjct: 465 HKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSL 524
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I+G+C++ + + A L+ EM+ G++PDV ++ L +L + +V A +L + M + G
Sbjct: 525 IHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGC 584
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+T TY T + GLC N I EA +LF ++ L C D+ Y L+ GL
Sbjct: 585 IPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGL 633
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 154/306 (50%), Gaps = 32/306 (10%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
Y +N +P+ S++I+ L K D LFK + + G+ PD+ +Y LI+ FC+
Sbjct: 475 YGINCKPN---AISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRS 531
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
G+ + ++ P+ TF+ LI LC E +++EA L + GC PN TY
Sbjct: 532 GKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTY 591
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
TL+ GL + +A +LF++M+ PDVVTY +
Sbjct: 592 TTLVKGLCMNDR-----------------------ISEATQLFMKMQKLGCLPDVVTYGT 628
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQ------PNVVTFNVIMDELCKNGKMDEASRLLD 239
+++G C + A L +M+ Q P+V+++++I+D LCK+G+ DEA L
Sbjct: 629 LMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFK 688
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M +GV PN Y +L+ GFC +G++ AK LF M G +YS++I+G+CK
Sbjct: 689 EMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEG 748
Query: 300 EIEGAL 305
+I+ AL
Sbjct: 749 QIDKAL 754
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 119/236 (50%), Gaps = 41/236 (17%)
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M+ G+QP+V T V++D CK GK+ EA+ LL++M+Q G + Y+TL+ G C+ R
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 266 VNRAKELFVSMESMG-----------------------------------------CTHT 284
++ A +LF+SM+ +G C T
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
+ SYSI+I+G CK++ + A L+ EM ++G+ PDV+ Y +L + E+A LF+
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
EM G+ +D T ID LCK ++EA EL + C LDI Y+ LI GL
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGL 236
>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Glycine max]
Length = 545
Score = 267 bits (682), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 152/409 (37%), Positives = 229/409 (55%), Gaps = 21/409 (5%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F ML MR +PP + FN + AK KHY TV+SL +RL + PD +T NILINCFC
Sbjct: 51 FHRMLCMRHTPP-IIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFC 109
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+G+++ F VL +IL+ + P+ VT T+LIKGLC + ++ +A KL G +
Sbjct: 110 HLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQV 169
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
+Y TLING+ + G T A+ L + E V V +A LF +M
Sbjct: 170 SYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEM 229
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+ +VVTY+++I GFC EA L EM+ + + P+V +N ++D L K GK+
Sbjct: 230 SVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKV 289
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA +L ++++ ++PN YNTL+DG+ AK +F ++ MG T V+SY+I+
Sbjct: 290 KEAKNVLAVIVKTCLKPNVITYNTLIDGY--------AKHVFNAVGLMGVTPDVWSYNIM 341
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
IN CK K +E AL+LY EM K + P+ V YN+L L + ++ A+ L DEM G
Sbjct: 342 INRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGH 401
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
A+ TY + I+GLCKN + +A+ L ++ + D+ N L+ GL
Sbjct: 402 HANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGL 450
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 180/346 (52%), Gaps = 5/346 (1%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R + P V +N + CL K K +LF ++ G+ ++ TY+ +I+ FC +G+++
Sbjct: 197 RLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTE 256
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
L ++ P+ + +L+ L E ++ EA + + +PNV TYNTLI+
Sbjct: 257 ALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLID 316
Query: 131 GLYRTGHTIVAL-NLFEEMASGN---GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
G + V L + ++ S N V++A L+ +M +N+ P+ VTY S+
Sbjct: 317 GYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSL 376
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G C + + A L+ EM D+G NV+T+N +++ LCKNG++D+A L++ M G+
Sbjct: 377 IDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGI 436
Query: 247 RPNAFVYNTLMDG-FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
+P+ + N L+ G C R+ A+ LF + G V++Y+I+I G+CK ++ A
Sbjct: 437 QPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAY 496
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
+L +M G P+ + + + L E + ++A KL EM G+
Sbjct: 497 ALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGL 542
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 112/240 (46%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
VD A F +M P ++ + ++ F + L + + +QP+ T N+
Sbjct: 44 VDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNI 103
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C G+++ A +L +++ G +P+ TL+ G CL G+V +A + + G
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
SY LING CK E A+ L + + +P+VV+YNT+ L + V A
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEAC 223
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LF EM G++A+ TY I G C + EA+ + + D+ YN L+D L
Sbjct: 224 NLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDAL 283
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 267 bits (682), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 150/445 (33%), Positives = 238/445 (53%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P + FN L +AK ++ V+SL +++ + G+ DLYTY+I INCF
Sbjct: 70 LFGDMVKSRPFPS-IVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF 128
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM------------------ 104
C+ ++S VL ++++ + P+ VT +SL+ G C RI
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 105 -----------------EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
EA AL ++ GC+P++ TY T++NGL + G +AL+L ++
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK 248
Query: 148 MASGNGEFGV-------EGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M G E V +G +D A LF +M ++ I PDV TY+S+I C
Sbjct: 249 MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 308
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++A LL +M+++ + PNVVTF+ ++D K GK+ EA +L D MI+ + P+ F Y++
Sbjct: 309 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 368
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L++GFC+ R++ AK +F M S C V +YS LI G+CK K +E + L+ EM +G
Sbjct: 369 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRG 428
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ + V Y TL F+ + A +F +M GV + TY +DGLCKN + +A+
Sbjct: 429 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 488
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
+F L+ E DI YN +I+G+
Sbjct: 489 VVFEYLQRSTMEPDIYTYNIMIEGM 513
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 191/353 (54%), Gaps = 12/353 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +N + L K KH D L+LF +++ G+ PD++TY+ LI+C C GR S +L
Sbjct: 258 VVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 317
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ PN VTF++LI E +++EA L+ ++ +P++FTY++LING
Sbjct: 318 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 377
Query: 137 HTIVALNLFEEMASGNG-------EFGVEGF-----VDKAKELFLQMKDENINPDVVTYT 184
A ++FE M S + ++GF V++ ELF +M + + VTYT
Sbjct: 378 RLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYT 437
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
++I GF A D + A+ + +M+ GV PN++T+N+++D LCKNGK+ +A + + + +
Sbjct: 438 TLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS 497
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
+ P+ + YN +++G C G+V ELF ++ G + V +Y+ +I+G+C+ E A
Sbjct: 498 TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEA 557
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
SL +M G P+ YNTL E + +L EM+ G A D T
Sbjct: 558 DSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 131/285 (45%), Gaps = 18/285 (6%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC---KMGR 67
R P V +F+ L K L+ + + PD++TY+ LIN FC ++
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
H F ++ I + CF PN VT+++LIKG C R+ E LF ++ G N TY T
Sbjct: 382 AKHMFELM--ISKDCF-PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDEN 175
LI+G ++ A +F++M S + G + KA +F ++
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+ PD+ TY +I G C A + L + +GV PNV+ +N ++ C+ G +EA
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
LL M + G PN+ YNTL+ G + EL M S G
Sbjct: 559 SLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCG 603
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 121/237 (51%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
VD A +LF M P +V + ++ N + L +M G+ ++ T+++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
++ C+ ++ A +L M+++G P+ ++L++G+C + R++ A L M MG
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
F+++ LI+G + + A++L +M+ +G +PD+V Y T+ L + ++ A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
L +M++ + AD Y T IDGLCK ++ +A+ LF + D+ Y+ LI
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 26/208 (12%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
D +FK++ S G+ P++ TYNIL++ CK G+++ VV + RS P+ T+ +
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG 153
I+G+C ++ + LF L + G PNV YNT+I+G R G
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK--------------- 554
Query: 154 EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
++A L +MK++ P+ TY ++IR D + L+ EM G
Sbjct: 555 --------EEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAG 606
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLM 241
+ T ++ + L +G++D++ LD++
Sbjct: 607 DASTIGLVTNML-HDGRLDKS--FLDML 631
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 90/206 (43%), Gaps = 35/206 (16%)
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+D+A L M++ P+ +N L+ + L M+++G +H +++YS
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 290 ILI-----------------------------------NGYCKNKEIEGALSLYGEMLSK 314
I I NGYC +K I A++L +M+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G KPD + TL LF ++ A L D+M + G D TY T ++GLCK I A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ L + + K E D+ YN +IDGL
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGL 268
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+Y L P + ++NI+ + K + LF L+ G+ P++ YN +I+ F
Sbjct: 490 VFEY-LQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGF 548
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ G +L ++ PN+ T+ +LI+ + +A L ++R G +
Sbjct: 549 CRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDA 608
Query: 123 FTYNTLINGLY 133
T + N L+
Sbjct: 609 STIGLVTNMLH 619
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 267 bits (682), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 149/445 (33%), Positives = 234/445 (52%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M RP P + F+ LF +A+ K YD VL L K++ G+ +LYT +I+INC
Sbjct: 59 LFQEMTRSRPRPRLI-DFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCC 117
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ ++S F +G+I++ + P+ VTF++LI GLC E R+ EA L ++ G +P +
Sbjct: 118 CRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177
Query: 123 FTYNTLINGLY-----------------------------------RTGHTIVALNLFEE 147
T N L+NGL ++G T +A+ L +
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237
Query: 148 MASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M + +G +D A LF +M+ + D++ YT++IRGFCYA
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++ LL +M+ + + P+VV F+ ++D K GK+ EA L MIQ G+ P+ Y +
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L+DGFC ++++A + M S GC + +++ILINGYCK I+ L L+ +M +G
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ D V YNTL E+ ++E A +LF EM V D +Y+ +DGLC N +A+
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
E+F + K ELDI YN +I G+
Sbjct: 478 EIFEKIEKSKMELDIGIYNIIIHGM 502
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 191/414 (46%), Gaps = 47/414 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F+ L L L L R+ G P L T N L+N C G+VS ++
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL 199
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R++ + F PN VT+ ++K +C + A L K+ + + Y+ +I+GL +
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259
Query: 135 TGHTIVALNLFEEMA--------------------SGNGEFGV----------------- 157
G A NLF EM +G + G
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 158 ----------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
EG + +A+EL +M I+PD VTYTS+I GFC N ++A +L M+
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+G PN+ TFN++++ CK +D+ L M GV + YNTL+ GFC G++
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
AKELF M S + SY IL++G C N E E AL ++ ++ ++ D+ IYN +
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+ +V+ A+ LF + GV D TY I GLCK + EA LFR +
Sbjct: 500 HGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM 553
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 118/238 (49%)
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
D A +LF +M P ++ ++ + ++ L +M +G+ N+ T +++
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
++ C+ K+ A + +I++G P+ ++TL++G CL GRV+ A EL M MG
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
T+ + + L+NG C N ++ A+ L M+ G +P+ V Y + V+ + Q A +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
L +M+ + D Y IDGLCK+ + A LF + I + DI Y LI G
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%)
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
V+Y +R ++A L EM +P ++ F+ + + + + D L
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M G+ N + + +++ C +++ A + +G ++S LING C
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ AL L M+ G KP ++ N L L +V A L D M G + TY
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +CK+ A+EL R + K +LD Y+ +IDGL
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGL 257
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 1/146 (0%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M++ R P + S+ IL L N + L +F+++ + + D+ YNI+I+
Sbjct: 444 LFQEMVSRRVRPD-IVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +V + + + P+ T+ +I GLC + + EA LF K+ G PN
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEM 148
TYN LI G + L EE+
Sbjct: 563 CTYNILIRAHLGEGDATKSAKLIEEI 588
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
L ++ P V ++NI+ G L K LF+++ G P+ TYNILI G
Sbjct: 518 LPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGD 577
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLI 94
+ ++ I R F+ +A T ++
Sbjct: 578 ATKSAKLIEEIKRCGFSVDASTVKMVV 604
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 149/445 (33%), Positives = 234/445 (52%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M RP P + F+ LF +A+ K YD VL L K++ G+ +LYT +I+INC
Sbjct: 59 LFQEMTRSRPRPRLI-DFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCC 117
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ ++S F +G+I++ + P+ VTF++LI GLC E R+ EA L ++ G +P +
Sbjct: 118 CRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177
Query: 123 FTYNTLINGLY-----------------------------------RTGHTIVALNLFEE 147
T N L+NGL ++G T +A+ L +
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237
Query: 148 MASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M + +G +D A LF +M+ + D++ YT++IRGFCYA
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++ LL +M+ + + P+VV F+ ++D K GK+ EA L MIQ G+ P+ Y +
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L+DGFC ++++A + M S GC + +++ILINGYCK I+ L L+ +M +G
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ D V YNTL E+ ++E A +LF EM V D +Y+ +DGLC N +A+
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
E+F + K ELDI YN +I G+
Sbjct: 478 EIFEKIEKSKMELDIGIYNIIIHGM 502
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 191/414 (46%), Gaps = 47/414 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F+ L L L L R+ G P L T N L+N C G+VS ++
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL 199
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R++ + F PN VT+ ++K +C + A L K+ + + Y+ +I+GL +
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259
Query: 135 TGHTIVALNLFEEMA--------------------SGNGEFGV----------------- 157
G A NLF EM +G + G
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 158 ----------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
EG + +A+EL +M I+PD VTYTS+I GFC N ++A +L M+
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+G PN+ TFN++++ CK +D+ L M GV + YNTL+ GFC G++
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
AKELF M S + SY IL++G C N E E AL ++ ++ ++ D+ IYN +
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+ +V+ A+ LF + GV D TY I GLCK + EA LFR +
Sbjct: 500 HGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM 553
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 193/418 (46%), Gaps = 36/418 (8%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++I+ L K+ D +LF + G D+ Y LI FC GR G +L +
Sbjct: 249 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
++ TP+ V F++LI E ++ EA L ++ G P+ TY +LI+G +
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368
Query: 139 IVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSV 186
A ++ + M S + F +D ELF +M + D VTY ++
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I+GFC AK L EM+ + V+P++V++ +++D LC NG+ ++A + + + + +
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+ +YN ++ G C +V+ A +LF S+ G V +Y+I+I G CK + A
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR------- 359
L+ +M G P+ YN L ++ KL +E++R G + D T R
Sbjct: 549 LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLA 608
Query: 360 ---------------TFIDGLC--KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
T + C +N+ + +A LF+ ++ + + ++ YN +I GL
Sbjct: 609 RMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGL 666
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 178/407 (43%), Gaps = 36/407 (8%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V +F+ L C K L K + G+ PD TY LI+ FCK ++
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 370
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+L ++ PN TF LI G C + I + LF K+ + G + TYNTLI
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINP 178
G G VA LF+EM S + G +KA E+F +++ +
Sbjct: 431 GFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL 490
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D+ Y +I G C A+ ++A L + +GV+P+V T+N+++ LCK G + EA L
Sbjct: 491 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLF 550
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL----------------------FVSM 276
M + G PN YN L+ G ++ +L M
Sbjct: 551 RKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARM 610
Query: 277 ESMGCTHTVFSYSILINGYC--KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
G VF+++ L+ +C +N + A +L+ M + G KP+VV YNT+ L +
Sbjct: 611 LKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGN 670
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+ + + D+M G + T TFI GLCK A+ L R +
Sbjct: 671 MISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKM 717
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 127/279 (45%), Gaps = 6/279 (2%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M++ R P + S+ IL L N + L +F+++ + + D+ YNI+I+
Sbjct: 444 LFQEMVSRRVRPD-IVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +V + + + P+ T+ +I GLC + + EA LF K+ G PN
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDK-AKELFLQMKDENINPDVV 181
TYN LI G + L EE+ F V+ + A +M PDV
Sbjct: 563 CTYNILIRAHLGEGDATKSAKLIEEIKRCG--FSVDASTLRFALSTLARMLKAGHEPDVF 620
Query: 182 TYTSVIRGFCYANDWN--EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
T+T+++R FC + + +A L M G +PNVVT+N ++ L + + +LD
Sbjct: 621 TFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLD 680
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
M + G +PNA +T + G C A L ME+
Sbjct: 681 QMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKMEN 719
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 118/238 (49%)
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
D A +LF +M P ++ ++ + ++ L +M +G+ N+ T +++
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
++ C+ K+ A + +I++G P+ ++TL++G CL GRV+ A EL M MG
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
T+ + + L+NG C N ++ A+ L M+ G +P+ V Y + V+ + Q A +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
L +M+ + D Y IDGLCK+ + A LF + I + DI Y LI G
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%)
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
V+Y +R ++A L EM +P ++ F+ + + + + D L
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M G+ N + + +++ C +++ A + +G ++S LING C
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ AL L M+ G KP ++ N L L +V A L D M G + TY
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +CK+ A+EL R + K +LD Y+ +IDGL
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGL 257
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFC--KMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
LS R+ G PD++T+ L+ FC + V + + + PN VT+ ++
Sbjct: 603 ALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTV 662
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN 152
IKGL + I + + ++ GC+PN T +T I+GL + A+ L +M + N
Sbjct: 663 IKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKMENDN 721
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 164/446 (36%), Positives = 241/446 (54%), Gaps = 51/446 (11%)
Query: 3 IFDYMLNMRPSPPPVCS--FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+FD L P P C+ FN L +AK +Y TV +++++N G+ PDLYT NILI+
Sbjct: 933 LFDRSLCSEPMP---CTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIH 989
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL------- 113
C C + V GF V G L+ F P+AVT T+L+KG+ E+ I +A LF ++
Sbjct: 990 CCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLG 1049
Query: 114 --RVFG-------------------------CEPNVFTYNTLINGLYRTGHTIVALNLFE 146
+ +G C+ +VFTY +I+ L + G T AL++F
Sbjct: 1050 DAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFS 1109
Query: 147 EMASGNGEFGVE------------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
EM V G + +A E F +M+ I+ DV TY S+I G A
Sbjct: 1110 EMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAG 1169
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
W E L M+D+G P+ TF +++D LCK GK+ EA ++L+LM G P+ YN
Sbjct: 1170 LWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYN 1229
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TLM+G CL G++ A +LF S+ G VFSY+ILINGYCK+++I+ A + EM K
Sbjct: 1230 TLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPK 1289
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+KP V YNTL L + +V A KLF EMQ G TY +DGLCKN ++ EA
Sbjct: 1290 GLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEA 1349
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
++LF++++ + + +I ++ L+DG+
Sbjct: 1350 MDLFQSIKKTEHKPNIEVFSILLDGM 1375
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 208/396 (52%), Gaps = 17/396 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRL--NSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
++ IL L K + + L +++ N G D++TY ++I+ CK G + +
Sbjct: 1053 TYGILINGLCKARKTGLAIKLHEKMKGNCKG---DVFTYGMIIDALCKDGMTTEALDMFS 1109
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ + P+ V ++SL+ GLC R+ EA F ++ G +V+TYN+LI+GL R G
Sbjct: 1110 EMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAG 1169
Query: 137 ---HTIVALNLFEEMASGNGEFGV---------EGFVDKAKELFLQMKDENINPDVVTYT 184
LNL + F EG V +A+++ M+ + PD++TY
Sbjct: 1170 LWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYN 1229
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+++ G C +A L + D+G++ NV ++N++++ CK+ K+DEA R + M
Sbjct: 1230 TLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPK 1289
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G++P+ YNTL+ C +GRV A++LFV M++ G + +Y +L++G CKN +E A
Sbjct: 1290 GLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEA 1349
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
+ L+ + KP++ +++ L + ++E A+K FDE+ ++G+ DT Y I+G
Sbjct: 1350 MDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILING 1409
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LC + EAV+L + C D +N +I L
Sbjct: 1410 LCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNL 1445
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 173/352 (49%), Gaps = 12/352 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L L + L FK + G+ D+YTYN LI+ + G
Sbjct: 1118 PDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWF 1177
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ F+P+A TFT LI GLC E ++ EA + +R G EP++ TYNTL+NGL
Sbjct: 1178 LNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCL 1237
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
G A LFE +A + V + +D+A F +M+ + + P VT
Sbjct: 1238 VGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVT 1297
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I C + A+ L +EM G + T+ V++D LCKNG ++EA L +
Sbjct: 1298 YNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIK 1357
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ +PN V++ L+DG C G++ A + F + G +Y+ILING C +
Sbjct: 1358 KTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLS 1417
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
A+ L +M KG PD + +N + L + +++ A +L +EM+ + D
Sbjct: 1418 EAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 1469
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 128/263 (48%), Gaps = 12/263 (4%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++ + P + ++N L L + LF+ L G+ ++++YNILIN +CK
Sbjct: 1215 LMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQ 1274
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
++ F + P+ VT+ +LI LC R+ A LF +++ G + TY
Sbjct: 1275 KIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYC 1334
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKDE 174
L++GL + GH A++LF+ + + +E G +++A + F ++
Sbjct: 1335 VLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKN 1394
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
+ PD + Y +I G C +EA LL +M ++G P+ +TFNVI+ L K ++ EA
Sbjct: 1395 GLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEA 1454
Query: 235 SRLLDLMIQIGVRPNAFVYNTLM 257
+LL+ M P+ V + L+
Sbjct: 1455 IQLLEEMRNRNFSPDEAVTSMLL 1477
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 14/222 (6%)
Query: 4 FDYMLNMRPS--PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
F + MRP P ++N L G L ++ T LF + + G F L TY +L++
Sbjct: 1280 FRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDG 1339
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK G + + I ++ PN F+ L+ G+C ++ EA F ++ G EP+
Sbjct: 1340 LCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPD 1399
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMAS-----GNGEFGV-------EGFVDKAKELFL 169
YN LINGL G A+ L +M + F V E + +A +L
Sbjct: 1400 TIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLE 1459
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
+M++ N +PD + ++ + W+ A L + +GV
Sbjct: 1460 EMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKGV 1501
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 92/193 (47%), Gaps = 3/193 (1%)
Query: 210 GVQPNVVTFNVIMDELCKNG--KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
G + ++ F + + C+ G K+++A +L D + P +N L+ G +
Sbjct: 904 GTKASLSPFERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYS 963
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
++ + +G +++ +ILI+ C + + ++G L +G +PD V TL
Sbjct: 964 TVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLV 1023
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
++ + + A +LFDEM + G+ D TY I+GLCK A++L ++ C+
Sbjct: 1024 KGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKG-NCK 1082
Query: 388 LDIRAYNCLIDGL 400
D+ Y +ID L
Sbjct: 1083 GDVFTYGMIIDAL 1095
>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 525
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 149/404 (36%), Positives = 215/404 (53%), Gaps = 14/404 (3%)
Query: 10 MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS 69
M P PP F LFG + K KHY T +SL K S G+ PD++T I+INC C +
Sbjct: 1 MNPLPPDK-DFATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTV 59
Query: 70 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
GF VLG + + P VTF +LI GLCAE + AA L G E N +T+ T+I
Sbjct: 60 FGFSVLGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTII 119
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFGV-------------EGFVDKAKELFLQMKDENI 176
NGL + G T A++ E++ N F + +G + A F M + I
Sbjct: 120 NGLCKVGDTAGAISYLEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGI 179
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
PD+V Y S+I G C WNEA LL MM +G+ PNV TFNV++D CK GK+ A
Sbjct: 180 QPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKT 239
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
++ M+ +GV P+ YN+++ G CL ++N A ++F M G V +YS LI+G+C
Sbjct: 240 IMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWC 299
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K + I A+ + EM++ G+ DVV ++TL + + E A +LF M +
Sbjct: 300 KTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQ 359
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
T +DGL K + EA+ LFR + + EL+I YN ++DG+
Sbjct: 360 TCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGM 403
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 12/362 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+++ + L K+ L+ F + G+ PDL YN LI+ C GR + +LG +
Sbjct: 150 AYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNM 209
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+R PN TF L+ C E +I A + + G EP+V TYN++I+G
Sbjct: 210 MRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQM 269
Query: 139 IVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSV 186
A+ +FE M V + ++KA + +M + +N DVVT++++
Sbjct: 270 NDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTL 329
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I GFC A A L M + PN+ T +I+D L K EA L M ++ +
Sbjct: 330 IGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNL 389
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
N YN ++DG C G+ N A+ELF + S G V +Y+ +I G CK ++ A
Sbjct: 390 ELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAED 449
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L +M G P+ YN L L + + + R+ K M+ G++AD T I
Sbjct: 450 LLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMKGKGLSADATTTELLISYFS 509
Query: 367 KN 368
N
Sbjct: 510 AN 511
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 183/399 (45%), Gaps = 13/399 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +F L L + L G + YT+ +IN CK+G +
Sbjct: 75 PTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISY 134
Query: 75 LGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
L +I R+ + +++++ LC + + A F+ + G +P++ YN+LI+GL
Sbjct: 135 LEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLC 194
Query: 134 RTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
G A L M F EG + +AK + M + PDVV
Sbjct: 195 SFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVV 254
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY SVI G C + N+A + M+ +G+ PNVVT++ ++ CK +++A +LD M
Sbjct: 255 TYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEM 314
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G+ + ++TL+ GFC GR A ELF +M + + +I+++G K +
Sbjct: 315 VNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFH 374
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A+SL+ +M ++ ++V YN + + + A +LF + G+ D Y T
Sbjct: 375 SEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTM 434
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I GLCK + +A +L + C + YN L+ GL
Sbjct: 435 IKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGL 473
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 155/333 (46%), Gaps = 47/333 (14%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N L L ++ +L + G+ P++ T+N+L++ FCK G++S +
Sbjct: 181 PDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTI 240
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ ++ P+ VT+ S+I G C S++ +A +F + G PNV TY++LI+G +
Sbjct: 241 MCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCK 300
Query: 135 TGHTIVALNLFEEMA--------------------SGNGEFGVE---------------- 158
T + A+ + +EM +G E +E
Sbjct: 301 TRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQT 360
Query: 159 -----------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
F +A LF +M+ N+ ++VTY V+ G C +N+A+ L +
Sbjct: 361 CAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLP 420
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+G+Q +VV + ++ LCK G +D+A LL M + G PN F YN L+ G ++
Sbjct: 421 SKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDIS 480
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
R+ + + M+ G + + +LI+ + NKE
Sbjct: 481 RSTKYLMLMKGKGLSADATTTELLISYFSANKE 513
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 140/398 (35%), Positives = 223/398 (56%), Gaps = 24/398 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M++ RP P + F L +AK K +D V+SLF+++ G+ P LYT NI++NC
Sbjct: 69 LFTRMVHSRPLPS-IVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCV 127
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ + LG++++ F P+ VTFTSL+ G C +RI +A ALF ++ G PNV
Sbjct: 128 CRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNV 187
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TY TLI+ L + H ++ A E+F QM D I P+VVT
Sbjct: 188 VTYTTLIHCLCKNRH-----------------------LNHAVEIFNQMGDNGIRPNVVT 224
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S++ G C W++A LL +MM +G+QPNV+TF ++D K GK+ EA L +MI
Sbjct: 225 YNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMI 284
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q+ V P+ F Y L++G C GR++ A+++F MES G +Y+ LI+G+CK+K +E
Sbjct: 285 QMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVE 344
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
++ EM KG+ + + Y L + + + A ++F++M D TY +
Sbjct: 345 DGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLL 404
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
DGLC N Y+ +A+ +F+ +R + +++I Y +I G+
Sbjct: 405 DGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGM 442
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 172/330 (52%), Gaps = 15/330 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD ++ M P V ++ L CL KN+H + + +F ++ G+ P++ TYN L++
Sbjct: 174 LFDQIVGM-GFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGL 232
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C++GR S +L +++ PN +TFT+LI +IMEA L+ + P+V
Sbjct: 233 CEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDV 292
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG--------VEGF-----VDKAKELFL 169
FTY LINGL G A +F M S NG + + GF V+ ++F
Sbjct: 293 FTYTALINGLCTYGRLDEARQMFYLMES-NGYYPNEVTYTTLIHGFCKSKRVEDGTKIFY 351
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M + + + +TYT +I+G+C + A+ + +M + P++ T+NV++D LC NG
Sbjct: 352 EMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNG 411
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+++A + M + + N Y ++ G C G+V A +LF S+ S G V +Y+
Sbjct: 412 YVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYT 471
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
+I+G+C+ I A +L+ +M G P+
Sbjct: 472 TMISGFCRRGFIHEADALFKKMKEDGFLPN 501
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 124/239 (51%)
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
++A +LF +M P +V +T ++ ++ L +M G+ P + T N++
Sbjct: 64 NEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIV 123
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
M+ +C++ + AS L M+++G P+ + +L+ GFC R+ A LF + MG
Sbjct: 124 MNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGF 183
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
V +Y+ LI+ CKN+ + A+ ++ +M GI+P+VV YN+L L EI + A
Sbjct: 184 RPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAW 243
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
L +M + G+ + T+ ID K I+EA EL++ + + D+ Y LI+GL
Sbjct: 244 LLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGL 302
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 116/254 (45%), Gaps = 12/254 (4%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V +F L K L+K + ++PD++TY LIN C GR+
Sbjct: 251 RGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDE 310
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ + + + PN VT+T+LI G C R+ + +F ++ G N TY LI
Sbjct: 311 ARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQ 370
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKDENINP 178
G G VA +F +M S + G+V+KA +F M+ ++
Sbjct: 371 GYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDI 430
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
++VTYT +I+G C +A L + +G++PNV+T+ ++ C+ G + EA L
Sbjct: 431 NIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALF 490
Query: 239 DLMIQIGVRPNAFV 252
M + G PN V
Sbjct: 491 KKMKEDGFLPNESV 504
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 106/218 (48%)
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++R + +NEA L M+ P++V F ++ + K + D L + M
Sbjct: 50 YRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQ 109
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+G+ P + N +M+ C + + RA M +G + +++ L++G+C IE
Sbjct: 110 ILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIE 169
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL+L+ +++ G +P+VV Y TL L + + A ++F++M +G+ + TY + +
Sbjct: 170 DALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLV 229
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GLC+ +A L R + + ++ + LID
Sbjct: 230 SGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAF 267
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 149/410 (36%), Positives = 223/410 (54%), Gaps = 14/410 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNST-GLFPDLYTYNILINCF 62
F M M P P V F +L G + K KHY T +SL K ++S+ G+ PD + N++IN
Sbjct: 63 FHTMAKMNPLPS-VIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVVINSL 121
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C + V+ GF VLG +L+ P+ VTFT LI GLC + + A L + G +V
Sbjct: 122 CHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDV 181
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
TY LINGL + G T A+ +M N V +G V +A L L+
Sbjct: 182 KTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLE 241
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + I P++VTYT +I+G C W EA LL EMM GV P++ + N+++D LCK GK
Sbjct: 242 MSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGK 301
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ +A ++ MI +G P+ F YN+L+D +CL +++ A +F M S GC + +Y+
Sbjct: 302 IMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTS 361
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI+G+CK K I A+ L EM+ G PDVV + TL ++ + A +LF M + G
Sbjct: 362 LIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYG 421
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ T +DGLCK+ + EA+ LF + +L+I Y+ ++DG+
Sbjct: 422 QVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGM 471
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 169/367 (46%), Gaps = 12/367 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L K+ L L ++ G+ P+L TY LI C GR +
Sbjct: 214 PNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSL 273
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ P+ + L+ LC E +IM+A ++ + + G P+VFTYN+LI+
Sbjct: 274 LDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCL 333
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
A +FE M S + + ++KA L +M PDVVT
Sbjct: 334 QNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVT 393
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+T++I GFC AK L + M G PN+ T +I+D LCK+ + EA L M
Sbjct: 394 WTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAME 453
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ + N +Y+ ++DG C G++N A ELF + + G V++Y+I+ING+ K ++
Sbjct: 454 KSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLD 513
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L M G PD YN L ++ R+ K M+ G + D T I
Sbjct: 514 KAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMII 573
Query: 363 DGLCKNS 369
+ L N
Sbjct: 574 NYLSTNQ 580
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 109/271 (40%), Gaps = 47/271 (17%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L D +F+ + S G PD+ Y LI+ +CK+ ++ +
Sbjct: 319 PDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHL 378
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ FTP+ VT+T+LI G C R + A LF + +G PN+ T +++GL +
Sbjct: 379 LDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCK 438
Query: 135 TGHTIVALNLFEEMASGNGE---------------------------------------- 154
+ AL+LF M N +
Sbjct: 439 SQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYA 498
Query: 155 -------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
F +G +DKA++L M++ PD TY ++G + + L M
Sbjct: 499 YTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMR 558
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D+G + T +I++ L N +E L
Sbjct: 559 DKGFSVDATTTEMIINYLSTNQGDNELREFL 589
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/410 (34%), Positives = 230/410 (56%), Gaps = 13/410 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+++L+M PP+ FN + L K H+ +S +++ G+ P+++T+NILINCF
Sbjct: 40 FNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFS 99
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ +++ F ++ +IL+ + P+ VT +L++GLC ++ EA + +
Sbjct: 100 HLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQV 159
Query: 124 TYNTLINGLYRTGHTIVALNLFEEM-------------ASGNGEFGVEGFVDKAKELFLQ 170
+Y TLINGL ++G T AL L ++ + F + V A +L+ +
Sbjct: 160 SYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSE 219
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + I P+VVT+ S+I GFC EA LL EM V PNV TFN+++D LCK G+
Sbjct: 220 MIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGE 279
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ +A+ +L +MI+ GV PN Y +LMDG+ L VN+AK +F ++ G T V SYS+
Sbjct: 280 VKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSV 339
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+ING CKNK ++ A+ L+ EM K + P+ V Y++L L + ++ + L DE+ G
Sbjct: 340 MINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRG 399
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
A+ TY + ++GLCKN + +A+ L ++ + D+ Y L+DGL
Sbjct: 400 QPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGL 449
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/383 (30%), Positives = 193/383 (50%), Gaps = 24/383 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLF-PDLYTYNILINCFCKMGRVSHGFVVLGR 77
S+ L L K+ L L +++ L PD+ Y +I+ FCK V + +
Sbjct: 160 SYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSE 219
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
++ PN VTF SLI G C ++ EA L ++ + PNV+T+N LI+GL +
Sbjct: 220 MIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCK--- 276
Query: 138 TIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
EG V KA + M + + P+VVTYTS++ G+ + N
Sbjct: 277 --------------------EGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVN 316
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
+AK + + +GV PNV +++V+++ LCKN +DEA +L M + PN Y++L+
Sbjct: 317 KAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLI 376
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
DG C +GR++ +L + + G + +Y+ L+NG CKN +++ A++L +M +GI+
Sbjct: 377 DGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQ 436
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
PD+ Y TL L + +++ A +++ ++ G + Y I+GLCK + EA+ L
Sbjct: 437 PDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSL 496
Query: 378 FRTLRILKCELDIRAYNCLIDGL 400
+ C D Y LI L
Sbjct: 497 LSQMEDNGCMPDAVTYETLISAL 519
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 171/332 (51%), Gaps = 23/332 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FN L + L ++ + P++YT+NILI+ CK G V V
Sbjct: 227 PNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSV 286
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ PN VT+TSL+ G + +A +F + + G PNV +Y+ +INGL +
Sbjct: 287 LSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCK 346
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
VD+A +LF +M +N+ P+ VTY+S+I G C +
Sbjct: 347 NK-----------------------MVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSG 383
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
++ L+ E+ ++G N++T+N +++ LCKN ++D+A LL M G++P+ Y
Sbjct: 384 RISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYT 443
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+DG C GR+ A+ ++ + G + Y+++ING CK + ALSL +M
Sbjct: 444 TLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDN 503
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
G PD V Y TL LF+ ++ +A KL EM
Sbjct: 504 GCMPDAVTYETLISALFKNNKNGKAVKLLREM 535
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+N R P + ++N L L KN D ++L ++ G+ PD+ TY L++ CK GR
Sbjct: 395 INNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGR 454
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ + +L + N +T +I GLC E EA +L +++ GC P+ TY T
Sbjct: 455 LKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYET 514
Query: 128 LINGLYRTGHTIVALNLFEEM 148
LI+ L++ A+ L EM
Sbjct: 515 LISALFKNNKNGKAVKLLREM 535
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 23/200 (11%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
++++ P +++ L L K+ V L +N+ G ++ TYN L+N CK +
Sbjct: 360 MHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQ 419
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V +L ++ P+ T+T+L+ GLC R+ +A ++ L G N+ Y
Sbjct: 420 VDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTV 479
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
+INGL + EGF D+A L QM+D PD VTY ++I
Sbjct: 480 MINGLCK-----------------------EGFFDEALSLLSQMEDNGCMPDAVTYETLI 516
Query: 188 RGFCYANDWNEAKCLLIEMM 207
N +A LL EM+
Sbjct: 517 SALFKNNKNGKAVKLLREMI 536
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 139/406 (34%), Positives = 218/406 (53%), Gaps = 24/406 (5%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
SF IL C LS F +L GL PD+ T+N L++ C RVS + ++
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ PN VTFT+L+ GLC E RI+EA AL ++ G +P TY T+++G+ + G T
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235
Query: 139 IVALNLFEEMASGN-------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
+ ALNL +M + +G A+ LF +M+++ I PD+ TY S
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I GFC + W++A+ LL EM+++ + P+VVT+N +++ K GK EA L D M+ G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
+ PN Y++++DGFC R++ A+ +F M + GC+ + +++ LI+GYC K I+ +
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGM 415
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
L EM G+ D YNTL + + + A L EM G+ D T T +DGL
Sbjct: 416 ELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGL 475
Query: 366 CKNSYIVEAVELFRTLRILKCEL-----------DIRAYNCLIDGL 400
C N + +A+E+F+ ++ K +L D++ YN LI GL
Sbjct: 476 CDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGL 521
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 193/427 (45%), Gaps = 58/427 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L K+ + +LF + G+FPDL+TYN +I FC GR S +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L +P+ VT+ +LI E + EA L+ ++ G PN TY+++I+G +
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372
Query: 135 TGHTIVALNLFEEMASGNGEFG-------VEGF-----VDKAKELFLQMKDENINPDVVT 182
A ++F MA+ ++G+ +D EL +M + + D T
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD---------- 232
Y ++I GF D N A LL EM+ G+ P++VT + ++D LC NGK+
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492
Query: 233 ------------------------------------EASRLLDLMIQIGVRPNAFVYNTL 256
EA L + M G+ P+ Y+++
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG C R++ A ++F SM S + V +++ LINGYCK ++ L L+ EM +GI
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+ + Y TL ++ + A +F EM GV DT T R + GL + AV
Sbjct: 613 VANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVA 672
Query: 377 LFRTLRI 383
+ L++
Sbjct: 673 MLEKLQM 679
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 176/363 (48%), Gaps = 29/363 (7%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS- 69
R P V ++N L K + L+ + G+ P+ TY+ +I+ FCK R+
Sbjct: 319 RKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDA 378
Query: 70 --HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
H F ++ + C +PN +TF +LI G C RI + L ++ G + TYNT
Sbjct: 379 AEHMFYLMAT--KGC-SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 128 LINGLYRTGHTIVALNLFEEMASG-------NGEFGVEGFVDKAK-----ELFLQMKDEN 175
LI+G Y G AL+L +EM S + ++G D K E+F M+
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495
Query: 176 -----------INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
+ PDV TY +I G + EA+ L EM +G+ P+ +T++ ++D
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
LCK ++DEA+++ D M PN + TL++G+C GRV+ ELF M G
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
+Y LI G+ K I GAL ++ EM+S G+ PD + + L+ +++RA + +
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLE 675
Query: 345 EMQ 347
++Q
Sbjct: 676 KLQ 678
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 146/313 (46%), Gaps = 34/313 (10%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
Y++ + P + +FN L K D + L + TGL D TYN LI+ F +
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF--------- 116
G ++ +L ++ S P+ VT +L+ GLC ++ +A +F ++
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503
Query: 117 --GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDE 174
G EP+V TYN LI+GL G + +A+EL+ +M
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFL-----------------------EAEELYEEMPHR 540
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
I PD +TY+S+I G C + +EA + M + PNVVTF +++ CK G++D+
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
L M + G+ NA Y TL+ GF G +N A ++F M S G + ++ G
Sbjct: 601 LELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660
Query: 295 YCKNKEIEGALSL 307
+E++ A+++
Sbjct: 661 LWSKEELKRAVAM 673
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 1/213 (0%)
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
GF +A L +M+ P+VV F +M + + + D L M + +R
Sbjct: 53 GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
+ + + L+ FC ++ A F + +G V +++ L++G C + AL+L+
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
+M +P+VV + TL L ++ A L D M DG+ TY T +DG+CK
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232
Query: 369 SYIVEAVELFRTLRILKCEL-DIRAYNCLIDGL 400
V A+ L R + + + ++ Y+ +ID L
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSL 265
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 63/145 (43%)
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L GF + A +LF M +V + L+ + + + +SLY +M K
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
I+ D+ + L ++ A F ++ + G+ D T+ T + GLC + EA+
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
LF + C ++ + L++GL
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGL 194
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 141/406 (34%), Positives = 220/406 (54%), Gaps = 24/406 (5%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
SFNIL C LS F ++ GL PD+ T+ L++ C RVS ++
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQM 175
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ PN VTFT+L+ GLC E RI+EA AL ++ G +P TY T+++G+ + G T
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235
Query: 139 IVALNLFEEMASGN-------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
+ ALNL +M + +G A+ LF +M+++ I PD+ TY S
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I GFC + W++A+ LL EM+++ + P+VVT+N +++ K GK EA+ L D M+ G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRG 355
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
+ PN YN+++DGFC R++ A+++F M + GC+ VF+++ LI+GYC K I+ +
Sbjct: 356 IIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGM 415
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
L EM +G+ + V YNTL + + A L +M GV D T T +DGL
Sbjct: 416 ELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 475
Query: 366 CKNSYIVEAVELFRTLRILKCEL-----------DIRAYNCLIDGL 400
C N + +A+E+F+ ++ K +L D+ YN LI GL
Sbjct: 476 CDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGL 521
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 193/427 (45%), Gaps = 58/427 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L K+ + +LF + G+FPDL+TYN +I FC GR S +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L +P+ VT+ +LI E + EAA L+ ++ G PN TYN++I+G +
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 372
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
A ++F MA+ V F +D EL +M + + VT
Sbjct: 373 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 432
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD---------- 232
Y ++I GFC D N A L +M+ GV P++VT N ++D LC NGK+
Sbjct: 433 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 492
Query: 233 ------------------------------------EASRLLDLMIQIGVRPNAFVYNTL 256
EA L + M G+ P+ Y+++
Sbjct: 493 KSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG C R++ A ++FVSM S + V +++ LINGYCK ++ L L+ EM +GI
Sbjct: 553 IDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGI 612
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
D +IY TL ++ + A +F EM GV DT T R + G + AV
Sbjct: 613 VADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVA 672
Query: 377 LFRTLRI 383
+ L++
Sbjct: 673 MLEDLQM 679
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 1/213 (0%)
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
GF +A L +M+ P+VV F +M + + + D L M + +R
Sbjct: 53 GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
+ + +N L+ FC ++ A F + +G V +++ L++G C + AL +
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
+M +P+VV + TL L ++ A L D M DG+ TY T +DG+CK
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232
Query: 369 SYIVEAVELFRTLRILKCEL-DIRAYNCLIDGL 400
V A+ L R + + + ++ Y+ +ID L
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSL 265
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 60/139 (43%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ + L K D +F + S P++ T+N LIN +CK GRV G +
Sbjct: 544 PDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLEL 603
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R +A+ + +LI G I A +F ++ G P+ T ++ G +
Sbjct: 604 FCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWS 663
Query: 135 TGHTIVALNLFEEMASGNG 153
A+ + E++ G
Sbjct: 664 KEELERAVAMLEDLQMSVG 682
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 64/145 (44%)
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L GF + A +LF M +V + L+ + + + +SLY +M K
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
I+ D+ +N L ++ A F ++ + G+ D T+ T + GLC + EA+
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
+ F + C ++ + L++GL
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGL 194
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 138/406 (33%), Positives = 218/406 (53%), Gaps = 24/406 (5%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
SF IL C LS F ++ GL PD+ T+N L++ C RVS + ++
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ PN VTFT+L+ GLC E RI+EA AL ++ G +P TY T+++G+ + G T
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235
Query: 139 IVALNLFEEMASGN-------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
+ ALNL +M + +G A+ LF +M+++ I PD+ TY S
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I GFC + W++A+ LL EM+++ + P+VVT+N +++ K GK EA L D M+ G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
+ PN Y++++DGFC R++ A+ +F M + GC+ + +++ LI+GYC K I+ +
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGM 415
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
L EM G+ D YNTL + + + A L EM G+ D T T +DGL
Sbjct: 416 ELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGL 475
Query: 366 CKNSYIVEAVELFRTLRILKCEL-----------DIRAYNCLIDGL 400
C N + +A+E+F+ ++ K +L D++ YN LI GL
Sbjct: 476 CDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGL 521
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 193/427 (45%), Gaps = 58/427 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L K+ + +LF + G+FPDL+TYN +I FC GR S +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L +P+ VT+ +LI E + EA L+ ++ G PN TY+++I+G +
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372
Query: 135 TGHTIVALNLFEEMASGNGEFG-------VEGF-----VDKAKELFLQMKDENINPDVVT 182
A ++F MA+ ++G+ +D EL +M + + D T
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD---------- 232
Y ++I GF D N A LL EM+ G+ P++VT + ++D LC NGK+
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492
Query: 233 ------------------------------------EASRLLDLMIQIGVRPNAFVYNTL 256
EA L + M G+ P+ Y+++
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG C R++ A ++F SM S + V +++ LINGYCK ++ L L+ EM +GI
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+ + Y TL ++ + A +F EM GV DT T R + GL + AV
Sbjct: 613 VANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVA 672
Query: 377 LFRTLRI 383
+ L++
Sbjct: 673 MLEKLQM 679
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 176/363 (48%), Gaps = 29/363 (7%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS- 69
R P V ++N L K + L+ + G+ P+ TY+ +I+ FCK R+
Sbjct: 319 RKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDA 378
Query: 70 --HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
H F ++ + C +PN +TF +LI G C RI + L ++ G + TYNT
Sbjct: 379 AEHMFYLMAT--KGC-SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 128 LINGLYRTGHTIVALNLFEEMASG-------NGEFGVEGFVDKAK-----ELFLQMKDEN 175
LI+G Y G AL+L +EM S + ++G D K E+F M+
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495
Query: 176 -----------INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
+ PDV TY +I G + EA+ L EM +G+ P+ +T++ ++D
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
LCK ++DEA+++ D M PN + TL++G+C GRV+ ELF M G
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
+Y LI G+ K I GAL ++ EM+S G+ PD + + L+ +++RA + +
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLE 675
Query: 345 EMQ 347
++Q
Sbjct: 676 KLQ 678
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 146/313 (46%), Gaps = 34/313 (10%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
Y++ + P + +FN L K D + L + TGL D TYN LI+ F +
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF--------- 116
G ++ +L ++ S P+ VT +L+ GLC ++ +A +F ++
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503
Query: 117 --GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDE 174
G EP+V TYN LI+GL G + +A+EL+ +M
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFL-----------------------EAEELYEEMPHR 540
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
I PD +TY+S+I G C + +EA + M + PNVVTF +++ CK G++D+
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
L M + G+ NA Y TL+ GF G +N A ++F M S G + ++ G
Sbjct: 601 LELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660
Query: 295 YCKNKEIEGALSL 307
+E++ A+++
Sbjct: 661 LWSKEELKRAVAM 673
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 1/213 (0%)
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
GF +A L +M+ P+VV F +M + + + D L M + +R
Sbjct: 53 GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
+ + + L+ FC ++ A F + +G V +++ L++G C + AL+L+
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
+M +P+VV + TL L ++ A L D M DG+ TY T +DG+CK
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232
Query: 369 SYIVEAVELFRTLRILKCEL-DIRAYNCLIDGL 400
V A+ L R + + + ++ Y+ +ID L
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSL 265
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 63/145 (43%)
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L GF + A +LF M +V + L+ + + + +SLY +M K
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
I+ D+ + L ++ A F ++ + G+ D T+ T + GLC + EA+
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
LF + C ++ + L++GL
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGL 194
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 138/406 (33%), Positives = 218/406 (53%), Gaps = 24/406 (5%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
SFNIL C LS F ++ GL PD+ T+ L++ C RVS + ++
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQM 175
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ PN VTFT+L+ GLC E RI+EA AL ++ G +P TY T+++G+ + G T
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235
Query: 139 IVALNLFEEMASGN-------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
+ ALNL +M + +G A+ LF +M+++ I PD+ TY S
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I GFC + W++A+ LL EM+++ + P+VVT+N +++ K GK EA L D M+ G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
+ PN Y++++DGFC R++ A+ +F M + GC+ + +++ LI+GYC K I+ +
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGM 415
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
L EM G+ D YNTL + + + A L EM G+ D T T +DGL
Sbjct: 416 ELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGL 475
Query: 366 CKNSYIVEAVELFRTLRILKCEL-----------DIRAYNCLIDGL 400
C N + +A+E+F+ ++ K +L D++ YN LI GL
Sbjct: 476 CDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGL 521
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 193/427 (45%), Gaps = 58/427 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L K+ + +LF + G+FPDL+TYN +I FC GR S +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L +P+ VT+ +LI E + EA L+ ++ G PN TY+++I+G +
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372
Query: 135 TGHTIVALNLFEEMASGNGEFG-------VEGF-----VDKAKELFLQMKDENINPDVVT 182
A ++F MA+ ++G+ +D EL +M + + D T
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD---------- 232
Y ++I GF D N A LL EM+ G+ P++VT + ++D LC NGK+
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492
Query: 233 ------------------------------------EASRLLDLMIQIGVRPNAFVYNTL 256
EA L + M G+ P+ Y+++
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG C R++ A ++F SM S + V +++ LINGYCK ++ L L+ EM +GI
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+ + Y TL ++ + A +F EM GV DT T R + GL + AV
Sbjct: 613 VANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVA 672
Query: 377 LFRTLRI 383
+ L++
Sbjct: 673 MLEKLQM 679
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 176/363 (48%), Gaps = 29/363 (7%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS- 69
R P V ++N L K + L+ + G+ P+ TY+ +I+ FCK R+
Sbjct: 319 RKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDA 378
Query: 70 --HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
H F ++ + C +PN +TF +LI G C RI + L ++ G + TYNT
Sbjct: 379 AEHMFYLMAT--KGC-SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 128 LINGLYRTGHTIVALNLFEEMASG-------NGEFGVEGFVDKAK-----ELFLQMKDEN 175
LI+G Y G AL+L +EM S + ++G D K E+F M+
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495
Query: 176 -----------INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
+ PDV TY +I G + EA+ L EM +G+ P+ +T++ ++D
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
LCK ++DEA+++ D M PN + TL++G+C GRV+ ELF M G
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
+Y LI G+ K I GAL ++ EM+S G+ PD + + L+ +++RA + +
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLE 675
Query: 345 EMQ 347
++Q
Sbjct: 676 KLQ 678
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 146/313 (46%), Gaps = 34/313 (10%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
Y++ + P + +FN L K D + L + TGL D TYN LI+ F +
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF--------- 116
G ++ +L ++ S P+ VT +L+ GLC ++ +A +F ++
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503
Query: 117 --GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDE 174
G EP+V TYN LI+GL G + +A+EL+ +M
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFL-----------------------EAEELYEEMPHR 540
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
I PD +TY+S+I G C + +EA + M + PNVVTF +++ CK G++D+
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
L M + G+ NA Y TL+ GF G +N A ++F M S G + ++ G
Sbjct: 601 LELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660
Query: 295 YCKNKEIEGALSL 307
+E++ A+++
Sbjct: 661 LWSKEELKRAVAM 673
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 1/213 (0%)
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
GF +A L +M+ P+VV F +M + + + D L M + +R
Sbjct: 53 GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
+ + +N L+ FC ++ A F + +G V +++ L++G C + AL+L+
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLF 172
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
+M +P+VV + TL L ++ A L D M DG+ TY T +DG+CK
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232
Query: 369 SYIVEAVELFRTLRILKCEL-DIRAYNCLIDGL 400
V A+ L R + + + ++ Y+ +ID L
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSL 265
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 64/145 (44%)
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L GF + A +LF M +V + L+ + + + +SLY +M K
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
I+ D+ +N L ++ A F ++ + G+ D T+ T + GLC + EA+
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
LF + C ++ + L++GL
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGL 194
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 260 bits (664), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 143/403 (35%), Positives = 224/403 (55%), Gaps = 31/403 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F +M+ RP P + F L +AK K +D V++L K L G+ DLYT N+L+NCF
Sbjct: 58 LFSHMVESRPLPS-IIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCF 116
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ + LG++++ F P+ TFTSLI G C +RI EA ++ ++ G +P+V
Sbjct: 117 CQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDV 176
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
Y T+I+ L + GH VD A LF QM++ I PDVV
Sbjct: 177 VIYTTIIDSLCKNGH-----------------------VDNALSLFNQMENYGIRPDVVM 213
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YTS++ G C + W +A LL MM + ++P+V+TFN ++D K GK+ +A L + MI
Sbjct: 214 YTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMI 273
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q+ + PN F Y +L++G C+ GR++ A+++F ME+ GC V +Y+ LING+CK K++E
Sbjct: 274 QMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVE 333
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ ++ EM KG+ + + Y TL + + A ++F M GV + TY +
Sbjct: 334 DAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLL 393
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELD-----IRAYNCLIDGL 400
LC N + +A+ +F ++ K E+D IR YN L+ GL
Sbjct: 394 HCLCYNGKVNKALMIFEDMQ--KREIDGVPPNIRTYNVLLHGL 434
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 186/371 (50%), Gaps = 26/371 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + + L KN H D LSLF ++ + G+ PD+ Y L+N C GR ++
Sbjct: 174 PDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLL 233
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ P+ +TF +LI E ++++A L+ ++ PN+FTY +LINGL
Sbjct: 234 LRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLC- 292
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+EG +D+A+++F M+ + PDVV YTS+I GFC
Sbjct: 293 ----------------------MEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCK 330
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+A + EM +G+ N +T+ ++ GK + A + M+ GV PN YN
Sbjct: 331 KVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYN 390
Query: 255 TLMDGFCLTGRVNRAKELFVSMESM---GCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
L+ C G+VN+A +F M+ G + +Y++L++G C N ++E AL ++G+M
Sbjct: 391 VLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDM 450
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
+ + ++ Y + + + +V+ A LF + GV + TY T I GL + +
Sbjct: 451 QKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLM 510
Query: 372 VEAVELFRTLR 382
+EA LFR ++
Sbjct: 511 LEAHVLFRKMK 521
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 120/239 (50%)
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
++A +LF M + P ++ +T ++ ++ L + GV ++ T N++
Sbjct: 53 NEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLL 112
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
M+ C++ + AS L ++++G P+ F + +L++GFCL R+ A + M MG
Sbjct: 113 MNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGI 172
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
V Y+ +I+ CKN ++ ALSL+ +M + GI+PDVV+Y +L L + A
Sbjct: 173 KPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADL 232
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
L M + + D T+ ID K +++A EL+ + + +I Y LI+GL
Sbjct: 233 LLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGL 291
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 112/217 (51%)
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++R ++ +NEA L M++ P+++ F +++ + K K D L +
Sbjct: 39 YREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQ 98
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+GV + + N LM+ FC + + A + +G +F+++ LING+C IE
Sbjct: 99 IMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIE 158
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+S+ +M+ GIKPDVVIY T+ L + V+ A LF++M+ G+ D Y + +
Sbjct: 159 EAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLV 218
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+GLC + +A L R + K + D+ +N LID
Sbjct: 219 NGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDA 255
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 39/153 (25%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNS---TGLFPDLYTYNILI 59
+F +M++ R PP + ++N+L CL N + L +F+ + G+ P++ TYN+L+
Sbjct: 373 VFGHMVS-RGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLL 431
Query: 60 NCFCKMGRVSHGFVVLGRILR-----------------------------------SCFT 84
+ C G++ +V G + +
Sbjct: 432 HGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVK 491
Query: 85 PNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 117
PN VT+T++I GL E ++EA LF K++ G
Sbjct: 492 PNVVTYTTMISGLFREGLMLEAHVLFRKMKEDG 524
>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 543
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 222/409 (54%), Gaps = 13/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
+ M+ M+P P V FN+LFG +AK KHY T +SL K ++ G+ P++ T+NI+INC C
Sbjct: 14 YHKMVTMKPFPC-VKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNIVINCLC 72
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
++ GF VLG + + P+ VTFT+++ GLC E + +A L+ G E + +
Sbjct: 73 RLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRY 132
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
T +INGL + GH+ AL+ ++M N V +G V +A +LF QM
Sbjct: 133 TRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQM 192
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I P++ TY +I G C + W EA LL MM +G+ P+V TFNVI K G +
Sbjct: 193 TGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMI 252
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
A + M +G+ N YN+++ C+ ++ A E+F M GC + +Y+ L
Sbjct: 253 SRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSL 312
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I+G+C+ K + A+ GEM++ G+ PDVV ++TL + + A +LF M + G
Sbjct: 313 IHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQ 372
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D T +DGL K + EA+ LFR L + +LDI Y+ +++G+
Sbjct: 373 LPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGM 421
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 178/409 (43%), Gaps = 47/409 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +F + L + + L G D YT +IN CK+G S
Sbjct: 94 PSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSY 153
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ + +++++ GLC + + EA LF+++ G +PN+FTYN LI+GL
Sbjct: 154 LKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCN 213
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
A L M G F G + +AK +F M I +VVT
Sbjct: 214 FDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVT 273
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S+I C N +A + M+ +G PN+VT+N ++ C+ M++A L M+
Sbjct: 274 YNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMV 333
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-------------------------- 276
G+ P+ ++TL+ GFC G+ AKELF M
Sbjct: 334 NNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHS 393
Query: 277 ---------ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
E M + YSI++NG C + ++ AL L+ + SKG+K DVV YN +
Sbjct: 394 EAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMI 453
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
L + ++ A L +M+ +G D TY F+ GL + I ++ +
Sbjct: 454 NGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTK 502
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 167/394 (42%), Gaps = 55/394 (13%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
L K H LS K++ D+ Y+ +++ CK G V + ++ PN
Sbjct: 141 LCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPN 200
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
T+ LI GLC R EAA L + G P+V T+N + +TG A ++F
Sbjct: 201 LFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFS 260
Query: 147 EMASGNGEFGVEGFV----------------DKAKELFLQMKDENINPDVVTYTSVIRGF 190
M G G+E V A E+F M + P++VTY S+I G+
Sbjct: 261 FM----GHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGW 316
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN- 249
C + N+A L EM++ G+ P+VVT++ ++ CK GK A L +M + G P+
Sbjct: 317 CETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDL 376
Query: 250 ----------------------------------AFVYNTLMDGFCLTGRVNRAKELFVS 275
+Y+ +++G C +G++N A ELF
Sbjct: 377 QTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSY 436
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
+ S G V +Y+I+ING CK ++ A L +M G PD YN L ++
Sbjct: 437 LSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYE 496
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
+ ++ K M+ G A+ T + I+ N
Sbjct: 497 ISKSTKYLMFMKGKGFRANATTTKLLINYFSANK 530
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 143/299 (47%), Gaps = 14/299 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FN++ G K S+F + G+ ++ TYN +I C + ++ V
Sbjct: 234 PDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEV 293
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++R PN VT+ SLI G C + +A ++ G +P+V T++TLI G +
Sbjct: 294 FDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCK 353
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G + A LF M +G F F +A LF +++ N + D++
Sbjct: 354 AGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCH-FHSEAMSLFRELEKMNSDLDII 412
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y+ ++ G C + N+A L + +GV+ +VVT+N++++ LCK G +D+A LL M
Sbjct: 413 IYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKM 472
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+ G P+ YN + G ++++ + + M+ G + +LIN + NKE
Sbjct: 473 EENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLINYFSANKE 531
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
++++ P + + I+ L K + +SLF+ L D+ Y+I++N C
Sbjct: 365 FVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSS 424
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
G+++ + + + VT+ +I GLC E + +A L K+ GC P+ TY
Sbjct: 425 GKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTY 484
Query: 126 NTLINGLYR 134
N + GL R
Sbjct: 485 NVFVQGLLR 493
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%)
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
V+ A + + M +M V +++L K K A+SL M G+KP+V +N
Sbjct: 7 VDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNI 66
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
+ L ++ F + M + GV T+ T ++GLC + +A+ L+ +
Sbjct: 67 VINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMG 126
Query: 386 CELDIRAYNCLIDGL 400
E D +I+GL
Sbjct: 127 YESDRYTRGAIINGL 141
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 138/406 (33%), Positives = 217/406 (53%), Gaps = 24/406 (5%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
SFNIL C LS F ++ GL PD+ T+ L++ C RVS ++
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQM 175
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ PN VTFT+L+ GLC E RI+EA AL ++ G +P TY T+++G+ + G T
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235
Query: 139 IVALNLFEEMASGN-------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
+ ALNL +M + +G A+ LF +M+++ I PD+ TY S
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I GFC + W++A+ LL EM+++ + P+VVT+N +++ K GK EA L D M+ G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
+ PN Y++++DGFC R++ A+ +F M + GC+ + +++ LI+GYC K I+ +
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGM 415
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
L EM G+ D YNTL + + + A L EM G+ D T T +DGL
Sbjct: 416 ELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGL 475
Query: 366 CKNSYIVEAVELFRTLRILKCEL-----------DIRAYNCLIDGL 400
C N + +A+E+F+ ++ K +L D++ YN LI GL
Sbjct: 476 CDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGL 521
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 193/427 (45%), Gaps = 58/427 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L K+ + +LF + G+FPDL+TYN +I FC GR S +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L +P+ VT+ +LI E + EA L+ ++ G PN TY+++I+G +
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372
Query: 135 TGHTIVALNLFEEMASGNGEFG-------VEGF-----VDKAKELFLQMKDENINPDVVT 182
A ++F MA+ ++G+ +D EL +M + + D T
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD---------- 232
Y ++I GF D N A LL EM+ G+ P++VT + ++D LC NGK+
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492
Query: 233 ------------------------------------EASRLLDLMIQIGVRPNAFVYNTL 256
EA L + M G+ P+ Y+++
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG C R++ A ++F SM S + V +++ LINGYCK ++ L L+ EM +GI
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+ + Y TL ++ + A +F EM GV DT T R + GL + AV
Sbjct: 613 VANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVA 672
Query: 377 LFRTLRI 383
+ L++
Sbjct: 673 MLEKLQM 679
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 176/363 (48%), Gaps = 29/363 (7%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS- 69
R P V ++N L K + L+ + G+ P+ TY+ +I+ FCK R+
Sbjct: 319 RKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDA 378
Query: 70 --HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
H F ++ + C +PN +TF +LI G C RI + L ++ G + TYNT
Sbjct: 379 AEHMFYLMAT--KGC-SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 128 LINGLYRTGHTIVALNLFEEMASG-------NGEFGVEGFVDKAK-----ELFLQMKDEN 175
LI+G Y G AL+L +EM S + ++G D K E+F M+
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495
Query: 176 -----------INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
+ PDV TY +I G + EA+ L EM +G+ P+ +T++ ++D
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
LCK ++DEA+++ D M PN + TL++G+C GRV+ ELF M G
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
+Y LI G+ K I GAL ++ EM+S G+ PD + + L+ +++RA + +
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLE 675
Query: 345 EMQ 347
++Q
Sbjct: 676 KLQ 678
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 146/313 (46%), Gaps = 34/313 (10%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
Y++ + P + +FN L K D + L + TGL D TYN LI+ F +
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF--------- 116
G ++ +L ++ S P+ VT +L+ GLC ++ +A +F ++
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503
Query: 117 --GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDE 174
G EP+V TYN LI+GL G + +A+EL+ +M
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFL-----------------------EAEELYEEMPHR 540
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
I PD +TY+S+I G C + +EA + M + PNVVTF +++ CK G++D+
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
L M + G+ NA Y TL+ GF G +N A ++F M S G + ++ G
Sbjct: 601 LELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660
Query: 295 YCKNKEIEGALSL 307
+E++ A+++
Sbjct: 661 LWSKEELKRAVAM 673
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 1/213 (0%)
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
GF +A L +M+ P+VV F +M + + + D L M + +R
Sbjct: 53 GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
+ + +N L+ FC ++ A F + +G V +++ L++G C + AL +
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
+M +P+VV + TL L ++ A L D M DG+ TY T +DG+CK
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232
Query: 369 SYIVEAVELFRTLRILKCEL-DIRAYNCLIDGL 400
V A+ L R + + + ++ Y+ +ID L
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSL 265
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 64/145 (44%)
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L GF + A +LF M +V + L+ + + + +SLY +M K
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
I+ D+ +N L ++ A F ++ + G+ D T+ T + GLC + EA+
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
+ F + C ++ + L++GL
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGL 194
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/408 (35%), Positives = 216/408 (52%), Gaps = 13/408 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ M+ + P PPP F+ L G + + HY T +SLF +L S G+ P + T+ ILINC+
Sbjct: 43 FNRMVRVFP-PPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYF 101
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ F +L IL+S + PN VTF ++I G C I +A L G + F
Sbjct: 102 HQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQF 161
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
TY TLINGL + G AL+L +EM + + + +GFV A L Q+
Sbjct: 162 TYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQI 221
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I D VTY S+I G C W E LL +M+ + V P+ TFN+++D LCK G++
Sbjct: 222 GERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRI 281
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA +L +M + G +P+ YN LM+G+C V+ A+ELF M G V +Y++L
Sbjct: 282 LEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVL 341
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I+GYCK K ++ A+ L+ E+ +K + P + YN+L L ++ KL DEM
Sbjct: 342 IDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQ 401
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
D TY ID LCK I+EA+ + + + +I YN ++DG
Sbjct: 402 PPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDG 449
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 121/361 (33%), Positives = 195/361 (54%), Gaps = 24/361 (6%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
+++ GC + + + V L ++ + PD YT+NILI+ CK GR+ VL + +
Sbjct: 235 SLIDGCCSVGR-WQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSK 293
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
P+ VT+ +L++G C+ + EA LF ++ G EP+V YN LI+G +T
Sbjct: 294 RGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTK---- 349
Query: 141 ALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
VD+A LF ++ ++N+ P + +Y S+I G C + + K
Sbjct: 350 -------------------MVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVK 390
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
LL EM P+VVT+N+++D LCK G++ EA +L +M++ GV+PN YN +MDG+
Sbjct: 391 KLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGY 450
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
CL VN AK++F M G + +Y++LINGYCK + ++ A+ L+ EM K + PD+
Sbjct: 451 CLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDI 510
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
YN+L L + ++ +L DEM G + D TY +D CK +A+ LFR
Sbjct: 511 ASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQ 570
Query: 381 L 381
+
Sbjct: 571 I 571
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/382 (31%), Positives = 190/382 (49%), Gaps = 23/382 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ L L+KN L L + + + + P+L Y+ LI+ CK G VS + +I
Sbjct: 162 TYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQI 221
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+AVT+ SLI G C+ R E L TK+ +P+ +T+N LI+ L + G
Sbjct: 222 GERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRI 281
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+ A + M S GE PD+VTY +++ G+C + +E
Sbjct: 282 LEAQGVLA-MMSKRGE----------------------KPDIVTYNALMEGYCSRENVHE 318
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A+ L M+ +G++P+V+ +NV++D CK +DEA L + + P YN+L+D
Sbjct: 319 ARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLID 378
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G C +GR++ K+L M V +Y+ILI+ CK I AL + M+ KG+KP
Sbjct: 379 GLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKP 438
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
++V YN + + V A +F+ M + G+ D Y I+G CK + EA+ LF
Sbjct: 439 NIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLF 498
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
+ +R DI +YN LIDGL
Sbjct: 499 KEMRHKNLIPDIASYNSLIDGL 520
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 184/361 (50%), Gaps = 14/361 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ M+ R P V ++N+L K K D + LFK L + L P + +YN LI+
Sbjct: 322 LFNRMVK-RGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGL 380
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C GR+SH +L + S P+ VT+ LI LC E RI+EA + + G +PN+
Sbjct: 381 CNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNI 440
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQ 170
TYN +++G + VA ++F M E + + VD+A LF +
Sbjct: 441 VTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKE 500
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M+ +N+ PD+ +Y S+I G C + LL EM D G P+V+T+N+++D CK
Sbjct: 501 MRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQP 560
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
D+A L +++ G+ P+ + + ++D C ++ A++ + GC+ V +Y+I
Sbjct: 561 FDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTI 619
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LIN CK+ A+ L +M PD + + + VL + ++ ++A KL +EM G
Sbjct: 620 LINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARG 679
Query: 351 V 351
+
Sbjct: 680 L 680
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 182/376 (48%), Gaps = 24/376 (6%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M++ R P + ++N L ++ LF R+ GL PD+ YN+LI+ +CK
Sbjct: 290 MMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTK 349
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
V V+ + P ++ SLI GLC RI L ++ P+V TYN
Sbjct: 350 MVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYN 409
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
LI+ L + G + AL + L + MK + + P++VTY ++
Sbjct: 410 ILIDALCKEGRILEALGV----------------------LVMMMK-KGVKPNIVTYNAM 446
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
+ G+C N+ N AK + M+ G++P+++ +NV+++ CK +DEA L M +
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+ YN+L+DG C GR+ +EL M G + V +Y+IL++ +CK + + A+S
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAIS 566
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L+ +++ +GI PD + + L + +++ A + G + + TY I+ LC
Sbjct: 567 LFRQIV-EGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALC 625
Query: 367 KNSYIVEAVELFRTLR 382
K+ EA+ L +
Sbjct: 626 KDGSFGEAMLLLSKME 641
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 112/240 (46%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
VD A F +M P + ++ + A L ++ +G+ P++ TF +
Sbjct: 36 VDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTI 95
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ A LL +++ G +PN +NT+++GFC+ G + +A + ++ + G
Sbjct: 96 LINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQG 155
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
F+Y LING KN +I+ AL L EM ++P++V+Y+ L L + V A
Sbjct: 156 YLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDAL 215
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
L ++ G+ D TY + IDG C E +L + + D +N LID L
Sbjct: 216 GLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDAL 275
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%)
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
C+ +D+A + M+++ P V++ L+ G A LF ++S G + ++
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
+++ILIN Y A SL +L G +P++V +NT+ + +A
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ G D +TY T I+GL KN I A+ L + + + ++ Y+ LIDGL
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGL 205
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/408 (35%), Positives = 216/408 (52%), Gaps = 13/408 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ M+ + P PPP F+ L G + + HY T +SLF +L S G+ P + T+ ILINC+
Sbjct: 43 FNRMVRVFP-PPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYF 101
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ F +L IL+S + PN VTF ++I G C I +A L G + F
Sbjct: 102 HQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQF 161
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
TY TLINGL + G AL+L +EM + + + +GFV A L Q+
Sbjct: 162 TYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQI 221
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I D VTY S+I G C W E LL +M+ + V P+ TFN+++D LCK G++
Sbjct: 222 GERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRI 281
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA +L +M + G +P+ YN LM+G+C V+ A+ELF M G V +Y++L
Sbjct: 282 LEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVL 341
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I+GYCK K ++ A+ L+ E+ +K + P + YN+L L ++ KL DEM
Sbjct: 342 IDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQ 401
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
D TY ID LCK I+EA+ + + + +I YN ++DG
Sbjct: 402 PPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDG 449
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 121/361 (33%), Positives = 195/361 (54%), Gaps = 24/361 (6%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
+++ GC + + + V L ++ + PD YT+NILI+ CK GR+ VL + +
Sbjct: 235 SLIDGCCSVGR-WQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSK 293
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
P+ VT+ +L++G C+ + EA LF ++ G EP+V YN LI+G +T
Sbjct: 294 RGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTK---- 349
Query: 141 ALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
VD+A LF ++ ++N+ P + +Y S+I G C + + K
Sbjct: 350 -------------------MVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVK 390
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
LL EM P+VVT+N+++D LCK G++ EA +L +M++ GV+PN YN +MDG+
Sbjct: 391 KLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGY 450
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
CL VN AK++F M G + +Y++LINGYCK + ++ A+ L+ EM K + PD+
Sbjct: 451 CLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDI 510
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
YN+L L + ++ +L DEM G + D TY +D CK +A+ LFR
Sbjct: 511 ASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQ 570
Query: 381 L 381
+
Sbjct: 571 I 571
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/382 (31%), Positives = 190/382 (49%), Gaps = 23/382 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ L L+KN L L + + + + P+L Y+ LI+ CK G VS + +I
Sbjct: 162 TYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQI 221
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+AVT+ SLI G C+ R E L TK+ +P+ +T+N LI+ L + G
Sbjct: 222 GERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRI 281
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+ A + M S GE PD+VTY +++ G+C + +E
Sbjct: 282 LEAQGVLA-MMSKRGE----------------------KPDIVTYNALMEGYCSRENVHE 318
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A+ L M+ +G++P+V+ +NV++D CK +DEA L + + P YN+L+D
Sbjct: 319 ARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLID 378
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G C +GR++ K+L M V +Y+ILI+ CK I AL + M+ KG+KP
Sbjct: 379 GLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKP 438
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
++V YN + + V A +F+ M + G+ D Y I+G CK + EA+ LF
Sbjct: 439 NIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLF 498
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
+ +R DI +YN LIDGL
Sbjct: 499 KEMRHKNLIPDIASYNSLIDGL 520
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 184/361 (50%), Gaps = 14/361 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ M+ R P V ++N+L K K D + LFK L + L P + +YN LI+
Sbjct: 322 LFNRMVK-RGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGL 380
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C GR+SH +L + S P+ VT+ LI LC E RI+EA + + G +PN+
Sbjct: 381 CNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNI 440
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQ 170
TYN +++G + VA ++F M E + + VD+A LF +
Sbjct: 441 VTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKE 500
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M+ +N+ PD+ +Y S+I G C + LL EM D G P+V+T+N+++D CK
Sbjct: 501 MRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQP 560
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
D+A L +++ G+ P+ + + ++D C ++ A++ + GC+ V +Y+I
Sbjct: 561 FDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTI 619
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LIN CK+ A+ L +M PD + + + VL + ++ ++A KL +EM G
Sbjct: 620 LINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARG 679
Query: 351 V 351
+
Sbjct: 680 L 680
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 182/376 (48%), Gaps = 24/376 (6%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M++ R P + ++N L ++ LF R+ GL PD+ YN+LI+ +CK
Sbjct: 290 MMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTK 349
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
V V+ + P ++ SLI GLC RI L ++ P+V TYN
Sbjct: 350 MVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYN 409
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
LI+ L + G + AL + L + MK + + P++VTY ++
Sbjct: 410 ILIDALCKEGRILEALGV----------------------LVMMMK-KGVKPNIVTYNAM 446
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
+ G+C N+ N AK + M+ G++P+++ +NV+++ CK +DEA L M +
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+ YN+L+DG C GR+ +EL M G + V +Y+IL++ +CK + + A+S
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAIS 566
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L+ +++ +GI PD + + L + +++ A + G + + TY I+ LC
Sbjct: 567 LFRQIV-EGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALC 625
Query: 367 KNSYIVEAVELFRTLR 382
K+ EA+ L +
Sbjct: 626 KDGSFGEAMLLLSKME 641
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 112/240 (46%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
VD A F +M P + ++ + A L ++ +G+ P++ TF +
Sbjct: 36 VDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTI 95
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ A LL +++ G +PN +NT+++GFC+ G + +A + ++ + G
Sbjct: 96 LINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQG 155
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
F+Y LING KN +I+ AL L EM ++P++V+Y+ L L + V A
Sbjct: 156 YLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDAL 215
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
L ++ G+ D TY + IDG C E +L + + D +N LID L
Sbjct: 216 GLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDAL 275
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%)
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
C+ +D+A + M+++ P V++ L+ G A LF ++S G + ++
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
+++ILIN Y A SL +L G +P++V +NT+ + +A
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ G D +TY T I+GL KN I A+ L + + + ++ Y+ LIDGL
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGL 205
>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
Length = 861
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/414 (35%), Positives = 221/414 (53%), Gaps = 38/414 (9%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG---LFPDLYTYNILI 59
+FD +L R + N +A++ V S + R+ G + PDL TY ILI
Sbjct: 37 VFDELLR-RGRGASIYGLNRALADVARHSPAAAV-SRYNRMARAGADEVTPDLCTYGILI 94
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGC 118
C C+ GR+ GF LG +++ F A+TFT L+KGLCA+ R +A + ++ GC
Sbjct: 95 GCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELGC 154
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINP 178
PNVF+YN L+NGL + AL L MA G P
Sbjct: 155 IPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGG--------------------GSPP 194
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD------ 232
DVV+YT+VI GF D ++A EM+D+G+ P+VVT++ I+ LCK MD
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHC 254
Query: 233 ------EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
E+ +L DLM++IGV+P+ Y+TL+DG+CL G+++ A +L M S+G
Sbjct: 255 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTV 314
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+YS LINGYCK +E AL L+ EM S G+ PD++ YN + LF+ + A +L+ +
Sbjct: 315 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 374
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G + TY + GLCKN +A+++F+ L ++ +L+ R +N +ID L
Sbjct: 375 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDAL 428
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 133/291 (45%), Gaps = 35/291 (12%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF---------- 62
SPP V S+ + K D S + + G+ PD+ TY+ +I
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPW 251
Query: 63 --CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK GRV + ++R P+ +T+++LI G C ++ EA L + + G +P
Sbjct: 252 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKP 311
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
N TY+TLING + AL LF+EM S ++PD+
Sbjct: 312 NTVTYSTLINGYCKISRMEDALVLFKEMES-----------------------SGVSPDI 348
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+TY +++G AK L + + + G Q + T+N+I+ LCKN D+A ++
Sbjct: 349 ITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQN 408
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
+ + ++ A +N ++D GR + AK+LFV+ S G ++Y ++
Sbjct: 409 LCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 459
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 15/238 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFG-CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
+FD M+ + P + ++ G CLA D + L + S GL P+ TY+ LIN
Sbjct: 265 LFDLMVRIGVKPDIITYSTLIDGYCLAGK--MDEAMKLLSGMVSVGLKPNTVTYSTLING 322
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
+CK+ R+ V+ + S +P+ +T+ +++GL R A L+ ++ G +
Sbjct: 323 YCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIE 382
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFV------------DKAKELFL 169
+ TYN +++GL + T AL +F+ + + + F D+AK+LF+
Sbjct: 383 LSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFV 442
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
+ P+ TY + E L + M D G + N I+ EL +
Sbjct: 443 AFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQ 500
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/372 (37%), Positives = 215/372 (57%), Gaps = 14/372 (3%)
Query: 43 LNSTGLFPDLYTYNILINCFCKMGR--VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 100
++ + + PD+YT ILINCFC F VLG + + PN VTF++L+ GL ++
Sbjct: 1 MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60
Query: 101 SRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV--- 157
++I++A LF ++ G EP+V TY+T+INGL + G T +A+ L ++M + V
Sbjct: 61 AKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVY 120
Query: 158 ---------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD 208
+ + +A E +M + I+P+VVTY+S++ GFC NEA L +M++
Sbjct: 121 STIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVE 180
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
+ V P+ VTFN+++D L K G + EA + + MI+ GV PN YN LMDG+C +++
Sbjct: 181 RNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDE 240
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
A++LF M GC +V SY+ILI G+CK+ I+ A L EM K + PD V Y+TL
Sbjct: 241 AQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMK 300
Query: 329 VLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
+ + + A KL +EM+ G+ D TY +DGLCK ++ EA EL + ++ K E
Sbjct: 301 GFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEP 360
Query: 389 DIRAYNCLIDGL 400
+I Y LI G+
Sbjct: 361 NIFIYTILIQGM 372
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 126/411 (30%), Positives = 206/411 (50%), Gaps = 13/411 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F + M + P V +L G +K K D V LF + G PD+ TY+ +IN
Sbjct: 32 FSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAV-KLFDEMVKMGYEPDVITYSTIIN 90
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CKMG + +L ++ PN V ++++I LC + I EA +++ G P
Sbjct: 91 GLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISP 150
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELF 168
NV TY+++++G G + A +LF++M N EG + +A+ +F
Sbjct: 151 NVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVF 210
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
M ++ + P+V TY +++ G+C + +EA+ L M+ +G P+V ++N+++ CK+
Sbjct: 211 ETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKS 270
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G++DEA LL M + P+ Y+TLM GFC GR A++L M S G + +Y
Sbjct: 271 GRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTY 330
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
SI+++G CK ++ A L M I+P++ IY L + ++E A +LF +
Sbjct: 331 SIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFV 390
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G+ D TY I GL K EA ELFR + + C + YN +I G
Sbjct: 391 KGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQG 441
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 192/391 (49%), Gaps = 13/391 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+ M P V +++ + L K + L K++ G P++ Y+ +I+
Sbjct: 69 LFDEMVKM-GYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSL 127
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK ++ L ++ +PN VT++S++ G C R EA +LF ++ P+
Sbjct: 128 CKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDT 187
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQ 170
T+N L++GL + G + A +FE M E V + +D+A++LF
Sbjct: 188 VTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNI 247
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + P V +Y +I+G C + +EAK LL EM + + P+ VT++ +M C++G+
Sbjct: 248 MVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGR 307
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+A +LL+ M G+ P+ Y+ ++DG C G ++ A EL +M+ +F Y+I
Sbjct: 308 PQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTI 367
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI G C ++E A L+ + KGI+PDVV Y + L + A +LF +M G
Sbjct: 368 LIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHG 427
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
++ TY I G +N A L +
Sbjct: 428 CLPNSCTYNVIIQGFLRNGDTSNAGRLIEEM 458
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 180/361 (49%), Gaps = 12/361 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L K+K + + + G+ P++ TY+ +++ FC +GR + +
Sbjct: 115 PNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSL 174
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ P+ VTF L+ GL E I+EA +F + G EPNV TYN L++G
Sbjct: 175 FKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCS 234
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
A LF M V G +D+AK L +M + + PD VT
Sbjct: 235 QSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVT 294
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+++++GFC +A+ LL EM G+ P+++T+++++D LCK G +DEA LL M
Sbjct: 295 YSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQ 354
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ + PN F+Y L+ G C G++ A+ELF ++ G V +Y+++I+G K
Sbjct: 355 ESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSN 414
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ +M G P+ YN + A +L +EM G +AD+ T++
Sbjct: 415 EACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLS 474
Query: 363 D 363
D
Sbjct: 475 D 475
>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 952
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 147/414 (35%), Positives = 221/414 (53%), Gaps = 38/414 (9%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG---LFPDLYTYNILI 59
+FD +L R + N +A++ V S + R+ G + PDL TY ILI
Sbjct: 37 VFDELLR-RGRGASIYGLNRALADVARHSPAAAV-SRYNRMARAGADEVTPDLCTYGILI 94
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGC 118
C C+ GR+ GF LG +++ F A+TFT L+KGLCA+ R +A + ++ GC
Sbjct: 95 GCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELGC 154
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINP 178
PNVF+YN L+NGL + AL L MA G P
Sbjct: 155 IPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGG--------------------GSPP 194
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD------ 232
DVV+YT+VI GF D ++A EM+D+G+ P+VVT++ I+ LCK MD
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHC 254
Query: 233 ------EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
E+ +L DLM++IGV+P+ Y+TL+DG+CL G+++ A +L M S+G
Sbjct: 255 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTV 314
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+YS LINGYCK +E AL L+ EM S G+ PD++ YN + LF+ + A +L+ +
Sbjct: 315 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 374
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G + TY + GLCKN +A+++F+ L ++ +L+ R +N +ID L
Sbjct: 375 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDAL 428
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 133/291 (45%), Gaps = 35/291 (12%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF---------- 62
SPP V S+ + K D S + + G+ PD+ TY+ +I
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPW 251
Query: 63 --CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK GRV + ++R P+ +T+++LI G C ++ EA L + + G +P
Sbjct: 252 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKP 311
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
N TY+TLING + AL LF+EM S ++PD+
Sbjct: 312 NTVTYSTLINGYCKISRMEDALVLFKEMES-----------------------SGVSPDI 348
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+TY +++G AK L + + + G Q + T+N+I+ LCKN D+A ++
Sbjct: 349 ITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQN 408
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
+ + ++ A +N ++D GR + AK+LFV+ S G ++Y ++
Sbjct: 409 LCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 459
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 157/390 (40%), Gaps = 73/390 (18%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRL---NSTGLFPDLYTYNILINCFCKMGRVSHG 71
P V S+N L L L L + G PD+ +Y +IN F K G
Sbjct: 156 PNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCA------------ESRIMEAAALFTKLRVFGCE 119
+ +L P+ VT++S+I LC E R++E+ LF + G +
Sbjct: 216 YSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVK 275
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPD 179
P++ TY+TLI+G + + G +D+A +L M + P+
Sbjct: 276 PDIITYSTLIDG-----------------------YCLAGKMDEAMKLLSGMVSVGLKPN 312
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
VTY+++I G+C + +A L EM GV P+++T+N+I+ L + + A L
Sbjct: 313 TVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 372
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
+ + G + YN ++ G C KNK
Sbjct: 373 RITESGTQIELSTYNIILHGLC-----------------------------------KNK 397
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
+ AL ++ + +K + +N + L ++ + + A LF +G+ + WTYR
Sbjct: 398 LTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYR 457
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELD 389
+ + + E +LF ++ C +D
Sbjct: 458 LMAENIIGQGLLEELDQLFLSMEDNGCTVD 487
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/406 (33%), Positives = 218/406 (53%), Gaps = 24/406 (5%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
SF IL C LS F ++ GL PD+ T+N L++ C RVS + ++
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ PN VTFT+L+ GLC E RI+EA AL ++ G +P TY T+++G+ + G T
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDT 235
Query: 139 IVALNLFEEMASGN-------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
+ AL+L +M + +G A+ LF +M+++ I PD+ TY S
Sbjct: 236 VSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I GFC + W++A+ LL EM+++ + P+VVT+N +++ K GK EA L D M+ G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
+ PN Y++++DGFC R++ A+ +F M + GC+ + +++ LI+GYC K I+ +
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGM 415
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
L EM G+ D YNTL + + + A L EM G+ D T T +DGL
Sbjct: 416 ELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGL 475
Query: 366 CKNSYIVEAVELFRTLRILKCEL-----------DIRAYNCLIDGL 400
C N + +A+E+F+ ++ K +L D++ YN LI GL
Sbjct: 476 CDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGL 521
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 193/427 (45%), Gaps = 58/427 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L K+ + +LF + G+FPDL+TYN +I FC GR S +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L +P+ VT+ +LI E + EA L+ ++ G PN TY+++I+G +
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372
Query: 135 TGHTIVALNLFEEMASGNGEFG-------VEGF-----VDKAKELFLQMKDENINPDVVT 182
A ++F MA+ ++G+ +D EL +M + + D T
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD---------- 232
Y ++I GF D N A LL EM+ G+ P++VT + ++D LC NGK+
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492
Query: 233 ------------------------------------EASRLLDLMIQIGVRPNAFVYNTL 256
EA L + M G+ P+ Y+++
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG C R++ A ++F SM S + V +++ LINGYCK ++ L L+ EM +GI
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+ + Y TL ++ + A +F EM GV DT T R + GL + AV
Sbjct: 613 VANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVA 672
Query: 377 LFRTLRI 383
+ L++
Sbjct: 673 MLEKLQM 679
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 176/363 (48%), Gaps = 29/363 (7%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS- 69
R P V ++N L K + L+ + G+ P+ TY+ +I+ FCK R+
Sbjct: 319 RKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDA 378
Query: 70 --HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
H F ++ + C +PN +TF +LI G C RI + L ++ G + TYNT
Sbjct: 379 AEHMFYLMAT--KGC-SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 128 LINGLYRTGHTIVALNLFEEMASG-------NGEFGVEGFVDKAK-----ELFLQMKDEN 175
LI+G Y G AL+L +EM S + ++G D K E+F M+
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495
Query: 176 -----------INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
+ PDV TY +I G + EA+ L EM +G+ P+ +T++ ++D
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
LCK ++DEA+++ D M PN + TL++G+C GRV+ ELF M G
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
+Y LI G+ K I GAL ++ EM+S G+ PD + + L+ +++RA + +
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLE 675
Query: 345 EMQ 347
++Q
Sbjct: 676 KLQ 678
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 146/313 (46%), Gaps = 34/313 (10%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
Y++ + P + +FN L K D + L + TGL D TYN LI+ F +
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF--------- 116
G ++ +L ++ S P+ VT +L+ GLC ++ +A +F ++
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503
Query: 117 --GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDE 174
G EP+V TYN LI+GL G + +A+EL+ +M
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFL-----------------------EAEELYEEMPHR 540
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
I PD +TY+S+I G C + +EA + M + PNVVTF +++ CK G++D+
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
L M + G+ NA Y TL+ GF G +N A ++F M S G + ++ G
Sbjct: 601 LELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660
Query: 295 YCKNKEIEGALSL 307
+E++ A+++
Sbjct: 661 LWSKEELKRAVAM 673
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 1/213 (0%)
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
GF +A L +M+ P+VV F +M + + + D L M + +R
Sbjct: 53 GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
+ + + L+ FC ++ A F + +G V +++ L++G C + AL+L+
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
+M +P+VV + TL L ++ A L D M DG+ TY T +DG+CK
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKI 232
Query: 369 SYIVEAVELFRTL-RILKCELDIRAYNCLIDGL 400
V A++L R + I ++ Y+ +ID L
Sbjct: 233 GDTVSALDLLRKMEEISHIIPNVVIYSAIIDSL 265
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 63/145 (43%)
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L GF + A +LF M +V + L+ + + + +SLY +M K
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
I+ D+ + L ++ A F ++ + G+ D T+ T + GLC + EA+
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
LF + C ++ + L++GL
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGL 194
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 148/453 (32%), Positives = 232/453 (51%), Gaps = 56/453 (12%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P V FN L G + + + D V+SL++++ + D+Y++NILI CF
Sbjct: 64 LFSDMVRSRPLPS-VIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCF 122
Query: 63 CKMGRVSHGFVVLGRILRSCFTP-------------------------------NAVTFT 91
C ++ G+I + F P N VTFT
Sbjct: 123 CSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCRPNVVTFT 182
Query: 92 SLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF---EEM 148
+L+ GLC E R++EA AL ++ G +PN TY T+++G+ + G T+ ALNL EEM
Sbjct: 183 TLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEM 242
Query: 149 ASGNGEFGV----------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+ + +G A L+ +M+++ I PD+ TY +I GFC + W+E
Sbjct: 243 SHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSE 302
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A+ LL EM+++ + PNVVT++ +++ K K EA L D M+ G+ PN YN+++D
Sbjct: 303 AQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMID 362
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
GFC R++ A+ +F M + GC+ VF+++ LI+GYC K I+ L EM G+
Sbjct: 363 GFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVA 422
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
D YNTL + + A L +M GV D T T +DGLC N + +A+E+F
Sbjct: 423 DTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMF 482
Query: 379 RTLRILKCEL-----------DIRAYNCLIDGL 400
+ ++ K +L D++ YN LI GL
Sbjct: 483 KAMQKSKMDLDASRPFNGVEPDVQTYNILISGL 515
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 191/435 (43%), Gaps = 58/435 (13%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M M P V ++ + L K+ + +L+ + G+FPDL+TYN +I+ FC G
Sbjct: 239 MEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSG 298
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
R S +L +L PN VT+++LI E + EA L+ ++ G PN TYN
Sbjct: 299 RWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYN 358
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDE 174
++I+G + A ++F MA+ V F +D EL +M +
Sbjct: 359 SMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTET 418
Query: 175 NINPDVVTYTSVIRGFCYANDWNEA----------------------------------- 199
+ D TY ++I GFC D N A
Sbjct: 419 GLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDA 478
Query: 200 ----KCLLIEMMD-------QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
K + MD GV+P+V T+N+++ L GK EA L M G+ P
Sbjct: 479 LEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVP 538
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
N Y+++++G C R++ A ++F SM S + V +++ L++GYCK ++ L L+
Sbjct: 539 NTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELF 598
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
EM +GI D + Y TL ++ + A +F EM GV DT T R+ + L
Sbjct: 599 CEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSK 658
Query: 369 SYIVEAVELFRTLRI 383
+ AV + L++
Sbjct: 659 EELKRAVAMLEDLQM 673
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 5/213 (2%)
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
GF +A L +M+ P+V+ FN +M + + + D L M + +
Sbjct: 51 GFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPC 110
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
+ + +N L+ FC ++ A F + +G V ++S L++G C + AL L+
Sbjct: 111 DVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLF 170
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
+M +P+VV + TL L +V A L D M DG+ + TY T +DG+CK
Sbjct: 171 HQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKI 226
Query: 369 SYIVEAVELFRTLRILK-CELDIRAYNCLIDGL 400
V A+ L R + + + ++ Y+ +IDGL
Sbjct: 227 GDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGL 259
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 55/110 (50%)
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L +G+ + K +E A+ L+ +M+ P V+ +N L V+ + + + L+ +M+R
Sbjct: 48 LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ D +++ I C S + A+ F + L + D+ ++ L+ GL
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGL 157
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 137/408 (33%), Positives = 221/408 (54%), Gaps = 13/408 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F M M P P + F G +AK K Y TV+ L +++ G+ +Y+ NILINC C
Sbjct: 81 FYRMARMNPRPS-IVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLC 139
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
++ V V G++ + P+ +TFT+LI G+C E +I A L+ ++ G EP+V
Sbjct: 140 RLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVI 199
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
+YNTLINGL +G+T +A+++F++M + V + V+ A + +M
Sbjct: 200 SYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEM 259
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
I PD +TY S++ G C NEA L M G +P+VVT+N+I+D L K+ +
Sbjct: 260 VGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLV 319
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
++A+ L M+ G+ P+ Y T++ G C G++N A LF ME GC V +Y+ +
Sbjct: 320 NDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTI 379
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I+ CK++ + A+ EM+ +GI P+ V Y+T+ + Q++ A +LF EM V
Sbjct: 380 IDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNV 439
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+T T+ +DGLC+ + EA +F T+ E +I YN L++G
Sbjct: 440 MPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNG 487
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 134/433 (30%), Positives = 226/433 (52%), Gaps = 47/433 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+N L L + + + + +FK++ G P++ TYN +I+ CK V+
Sbjct: 196 PDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDF 255
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+A+T+ S++ GLC ++ EA LF ++ GC+P+V TYN +I+ LY+
Sbjct: 256 LSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYK 315
Query: 135 T-----------------------------------GHTIVALNLFEEMASGNGEFGVEG 159
G A+ LF++M + V
Sbjct: 316 DRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVA 375
Query: 160 F------------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
+ V+ A E +M D I P+ VTY++++ GFC +EA L EM+
Sbjct: 376 YNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMV 435
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+ V PN +TF++++D LC+ G + EA + + M + GV PN + YN LM+G+CL ++N
Sbjct: 436 GRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMN 495
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A+++F M GC + SY+ILINGYC ++ ++ A +L +M K + P+ V YNT+
Sbjct: 496 EARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIM 555
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
L + ++ A +LF +M G+ TY ++GLCK+ ++ EA++LF++++ K E
Sbjct: 556 KGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLE 615
Query: 388 LDIRAYNCLIDGL 400
DI Y LI+G+
Sbjct: 616 PDIILYTILIEGM 628
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/422 (31%), Positives = 208/422 (49%), Gaps = 47/422 (11%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP ++N + L + LFKR+ G PD+ TYNI+I+ K V+
Sbjct: 262 RGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVND 321
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
L ++ P+ VT+T+++ GLC ++ EA LF K+ GC+P+V YNT+I+
Sbjct: 322 AADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIID 381
Query: 131 GL---------------------------YRT--------GHTIVALNLFEEMASGNG-- 153
L Y T G A LF+EM N
Sbjct: 382 SLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMP 441
Query: 154 ---EFGV-------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
F + EG V +A+ +F M ++ + P++ TY +++ G+C NEA+ +
Sbjct: 442 NTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVF 501
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
M+ +G P++ ++N++++ C + +MD+A LL M + PN YNT+M G C
Sbjct: 502 EIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYV 561
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
GR+ A+ELF M S G T+ +YSIL+NG CK+ ++ AL L+ M K ++PD+++Y
Sbjct: 562 GRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILY 621
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
L +F ++E A LF ++ DG+ TY I GL K EA ELFR ++
Sbjct: 622 TILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKWKM 681
Query: 384 LK 385
+K
Sbjct: 682 MK 683
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 148/324 (45%), Gaps = 23/324 (7%)
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
R+ R P+ V F + + + L ++ +FG V++ N LIN L R
Sbjct: 83 RMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLN 142
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
H VD A ++ +M I PDV+T+T++I G C
Sbjct: 143 H-----------------------VDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKI 179
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
A L EM+ G +P+V+++N +++ LC +G + A + M Q G +PN YNT+
Sbjct: 180 KVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTI 239
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+D C VN A + M G +Y+ +++G C ++ A L+ M G
Sbjct: 240 IDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGC 299
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
KPDVV YN + L++ V A EM G+ D TY T + GLC + EA+
Sbjct: 300 KPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIR 359
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
LF+ + C+ D+ AYN +ID L
Sbjct: 360 LFKKMEQKGCKPDVVAYNTIIDSL 383
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 116/240 (48%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
VD A F +M N P +V + + ++ L +M GV V + N+
Sbjct: 74 VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ LC+ +D A + M ++G++P+ + TL++G C G++ A EL+ M G
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
V SY+ LING C + A+ ++ +M G KP+VV YNT+ L + V A
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
EM G+ D TY + + GLC + EA LF+ + C+ D+ YN +ID L
Sbjct: 254 DFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSL 313
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 143/412 (34%), Positives = 227/412 (55%), Gaps = 32/412 (7%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F +L P+PP + FN + G L K+KHY TVLSL +++ G+ P L+ +
Sbjct: 61 FSLFSRLLRQNPTPPAI-EFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHF----- 114
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
H ++G + PN +TFT+LIKGLC + +I +A + G +
Sbjct: 115 --------QHPHQLMG------YHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQL 160
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELF 168
+ Y TLI+GL + G T AL+L + + V + V+ A +L+
Sbjct: 161 DQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLY 220
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+M + I+P+VVTY+++I GF +A L +M+ + ++P+V TFN+++D CK+
Sbjct: 221 SEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKD 280
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
GKM E + +M++ G++PN Y +LMDG+CL VN+AK + +M G + SY
Sbjct: 281 GKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSY 340
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ILI+G+CK K+++ A++L+ EM K I PDVV YN+L L ++ ++ A KL DEM
Sbjct: 341 NILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHD 400
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GV D TY + +D LCKN + +A+ L L+ ++ Y LIDGL
Sbjct: 401 RGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGL 452
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 172/334 (51%), Gaps = 23/334 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ L + LF ++ + PD+YT+NIL++ FCK G++ G V
Sbjct: 230 PNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTV 289
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ PN VT+ SL+ G C + +A ++ + G P++ +YN LI+G +
Sbjct: 290 FAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCK 349
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
A+NLF+EM ++I PDVVTY S+I G C
Sbjct: 350 IKKVDEAMNLFKEMHH-----------------------KHIIPDVVTYNSLIDGLCKLG 386
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ A L+ EM D+GV P+++T++ I+D LCKN ++D+A LL + G+RPN + Y
Sbjct: 387 KISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYT 446
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DG C GR+ A +F + G TV +Y+++I+G+C + AL+L +M
Sbjct: 447 ILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDN 506
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
PD V Y + LF+ + ++A KL + + R
Sbjct: 507 SCIPDAVTYEIIIRSLFDKDENDKAEKLREMITR 540
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 112/270 (41%), Gaps = 51/270 (18%)
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+ Y+S+ F ND +A L ++ Q P + FN I+ L K+ L
Sbjct: 42 IPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQ 101
Query: 241 M----------------IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG---- 280
M +G PN + TL+ G CL G++++A ++ +MG
Sbjct: 102 MEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLD 161
Query: 281 -------------------------------CTHTVFSYSILINGYCKNKEIEGALSLYG 309
V YS +I+G CK+K + A LY
Sbjct: 162 QVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYS 221
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
EM+SKGI P+VV Y+ L F + Q++ A LF++M + + D +T+ +DG CK+
Sbjct: 222 EMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDG 281
Query: 370 YIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ E +F + + ++ Y L+DG
Sbjct: 282 KMKEGKTVFAMMMKQGIKPNVVTYCSLMDG 311
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 68/141 (48%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP + +++ + L KN D ++L +L G+ P++YTY ILI+ CK GR+
Sbjct: 401 RGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLED 460
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ +L + T+T +I G C + EA AL +K++ C P+ TY +I
Sbjct: 461 AHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIR 520
Query: 131 GLYRTGHTIVALNLFEEMASG 151
L+ A L E + G
Sbjct: 521 SLFDKDENDKAEKLREMITRG 541
>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/384 (38%), Positives = 213/384 (55%), Gaps = 16/384 (4%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ +L+M P PP + F L +AK KHY TVLSL +++S G+ P++YT NILIN FC
Sbjct: 33 FNRLLHMHP-PPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFC 91
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ RV F VL +IL+ P+ TFT+LI+GLC E +I EA LF K+ G +PNV
Sbjct: 92 HLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVV 151
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
TY TLINGL + G+T A+ L M GN + V + V +A LF QM
Sbjct: 152 TYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQM 211
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+PD+ TYTS++ C +W LL +M++ + P+VV F+ ++D LCK GK+
Sbjct: 212 VGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKV 271
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA ++D+MIQ GV P+ Y TLMDG CL ++ A ++F M G V SY+ L
Sbjct: 272 TEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTL 331
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV-ERAFKLFDEMQRDG 350
IN K+ G +SL + PD V + V+ + ++ E+ L +EM
Sbjct: 332 INA--GKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDKMKLFEKGRTLLNEMVNSK 389
Query: 351 VAADTWTYRTFIDGLCKNSYIVEA 374
+ + + T +D LCK ++EA
Sbjct: 390 IMPNVVIFSTVVDALCKEGKVMEA 413
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 156/326 (47%), Gaps = 29/326 (8%)
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING---LY 133
R+L P+ V F L+ + +L T++ FG PNV+T N LIN L
Sbjct: 35 RLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLN 94
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
R G L AK L L + PD T+T++IRG C
Sbjct: 95 RVGFAFSVL---------------------AKILKLGHQ-----PDPTTFTTLIRGLCVE 128
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
EA L +M+D+G QPNVVT+ +++ LCK G A RLL M Q +P+ +Y
Sbjct: 129 GKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIY 188
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
+++D C +V A LF M G + +F+Y+ L++ C E + +L +M++
Sbjct: 189 TSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVN 248
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
I PDVVI++T+ L + +V A ++ D M + GV D TY T +DG C S + E
Sbjct: 249 SKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDE 308
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
AV++F + D+ +Y LI+
Sbjct: 309 AVKVFDMMVRKGFAPDVISYTTLINA 334
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 130/277 (46%), Gaps = 58/277 (20%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + + L K++ +LF ++ G+ PD++TY L++ C + H +
Sbjct: 183 PDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTL 242
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ S P+ V F++++ LC E ++ EA + + G EP+V TY TL++G
Sbjct: 243 LNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDG--- 299
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIR------ 188
H + + +D+A ++F M + PDV++YT++I
Sbjct: 300 --HCL------------------QSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDG 339
Query: 189 -GFCYAND---------------------------WNEAKCLLIEMMDQGVQPNVVTFNV 220
G + + + + LL EM++ + PNVV F+
Sbjct: 340 GGLVSLQEVIGLVKETPDAVKGGAVEVIRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFST 399
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAF-VYNTL 256
++D LCK GK+ EA ++D+MI+ GV PNA V++T+
Sbjct: 400 VVDALCKEGKVMEAHDVVDMMIKRGVEPNAVKVFDTM 436
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 141/326 (43%), Gaps = 47/326 (14%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F + +L + P P +F L L L LF ++ G P++ TY LIN
Sbjct: 100 FSVLAKILKLGHQPDPT-TFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLIN 158
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK+G S +L + + P+ V +TS+I LC + ++ EA LF+++ G P
Sbjct: 159 GLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISP 218
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELF 168
++FTY +L++ L L +M + EG V +A E+
Sbjct: 219 DIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIV 278
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
M + PDVVTYT+++ G C ++ +EA + M+ +G P+V+++ +++ K+
Sbjct: 279 DMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKD 338
Query: 229 G---------------------------------KMDEASR-LLDLMIQIGVRPNAFVYN 254
G K+ E R LL+ M+ + PN +++
Sbjct: 339 GGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFS 398
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMG 280
T++D C G+V A ++ M G
Sbjct: 399 TVVDALCKEGKVMEAHDVVDMMIKRG 424
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 117/274 (42%), Gaps = 35/274 (12%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A F ++ + P +V + ++ ++ L +M GV PNV T N+
Sbjct: 26 LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 85
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C ++ A +L ++++G +P+ + TL+ G C+ G++ A LF M G
Sbjct: 86 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 145
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
V +Y LING CK A+ L M +PDVVIY ++ L + QV AF
Sbjct: 146 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 205
Query: 341 KLFDEMQRDGVAADTWTY-----------------------------------RTFIDGL 365
LF +M G++ D +TY T +D L
Sbjct: 206 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 265
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
CK + EA E+ + E D+ Y L+DG
Sbjct: 266 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDG 299
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 111/227 (48%), Gaps = 12/227 (5%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F M+ SP + ++ L L + V +L ++ ++ + PD+ ++ +++
Sbjct: 205 FNLFSQMVGQGISPD-IFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVD 263
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK G+V+ ++ +++ P+ VT+T+L+ G C +S + EA +F + G P
Sbjct: 264 ALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAP 323
Query: 121 NVFTYNTLINGLYRTGHTIVALN----LFEEMASGNGEFGVE-------GFVDKAKELFL 169
+V +Y TLIN + G +V+L L +E VE +K + L
Sbjct: 324 DVISYTTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDKMKLFEKGRTLLN 383
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
+M + I P+VV +++V+ C EA ++ M+ +GV+PN V
Sbjct: 384 EMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNAV 430
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/445 (32%), Positives = 235/445 (52%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P + FN L +AK ++ V+SL +++ + G+ DLYTY+I INCF
Sbjct: 70 LFGDMVKSRPFPS-IVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF 128
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM------------------ 104
C+ ++S VL ++++ + P+ VT +SL+ G C RI
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 105 -----------------EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
EA AL ++ GC+P++ TY T++NGL + G +ALNL +
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNK 248
Query: 148 MASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M + + V F V+ A +LF +M+ + I P+VVTY S+I C
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGR 308
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++A LL M+++ + PNVVTFN ++D K GK+ EA +L + MIQ + P+ YN
Sbjct: 309 WSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNL 368
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L++GFC+ R++ AK++F M S C + +Y+ LING+CK K +E + L+ EM +G
Sbjct: 369 LINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRG 428
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ + V Y T+ F+ + A +F +M + V D TY + GLC + A+
Sbjct: 429 LVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTAL 488
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
+F+ L+ + EL+I YN +I+G+
Sbjct: 489 VIFKYLQKSEMELNIFIYNTMIEGM 513
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 153/348 (43%), Gaps = 44/348 (12%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V FN + L K +H + + LF + + G+ P++ TYN LINC C GR S +L
Sbjct: 258 VVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLS 317
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+L PN VTF +LI E +++EA L ++ +P+ TYN LING
Sbjct: 318 NMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHN 377
Query: 137 HTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYT 184
A +F+ M S + ++ + V+ ELF +M + + VTYT
Sbjct: 378 RLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYT 437
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA---------- 234
++I+GF A D + A+ + +M+ V +++T+++++ LC GK+D A
Sbjct: 438 TIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKS 497
Query: 235 ----------------------SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
DL + ++P+ YNT++ G C + A +L
Sbjct: 498 EMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDL 557
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
F M+ G +Y+ LI ++ + + L EM S G D
Sbjct: 558 FRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDA 605
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 122/240 (50%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
VD A +LF M P +V + ++ N + L +M G+ ++ T+++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
++ C+ ++ A +L M+++G P+ ++L++G+C + R++ A L M MG
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
F+++ LI+G + + A++L +M+ +G +PD+V Y T+ L + ++ A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
L ++M+ + A+ + T ID LCK ++ AV+LF + ++ YN LI+ L
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 87/171 (50%)
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+D+A L M++ P+ +N L+ + L M+++G +H +++YS
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
I IN +C+ ++ AL++ +M+ G +PD+V ++L ++ A L D+M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G DT+T+ T I GL ++ EAV L + C+ D+ Y +++GL
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M++ R P + +++IL L DT L +FK L + + +++ YN +I
Sbjct: 455 VFKQMVSNR-VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGM 513
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G+V + + + P+ VT+ ++I GLC++ + EA LF K++ G PN
Sbjct: 514 CKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNS 570
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL 169
TYNTLI R + L +EM S GFV A + L
Sbjct: 571 GTYNTLIRANLRDCDRAASAELIKEMRSS-------GFVGDASTISL 610
>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 412
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/358 (40%), Positives = 208/358 (58%), Gaps = 41/358 (11%)
Query: 43 LNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 102
++ GL PDL+T NIL NC C + +R
Sbjct: 1 MHLAGLSPDLFTLNILANCLCNL-----------------------------------NR 25
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVD 162
+ E A T + G P++ TYNTLI GL R VA + + G + G E D
Sbjct: 26 VSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVATCI---IIDGLCKVGHE---D 79
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
+AKE+F +MK + + P+V++Y+S++ GFC A E+K L EM+DQGVQPN+V FNV++
Sbjct: 80 EAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLI 139
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
D LCK GK+ EA +LL++ IQ G+ + YN+L+DGFC G ++ A++LF+SM S GC
Sbjct: 140 DILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCE 199
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
H SY+ILINGYCK ++E A++LY EM G +P+V Y+TL L + +V A KL
Sbjct: 200 HNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKL 259
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
F M+ G++ D+ Y F+DGLCKN + EA+ELF L+ +LD +Y+ LIDGL
Sbjct: 260 FGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGL 317
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 191/400 (47%), Gaps = 33/400 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + NIL CL L+ + G PD+ TYN LI C++ R+S
Sbjct: 8 PDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRIS----- 62
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
V +I GLC EA +F +++ G PNV +Y++L++G
Sbjct: 63 -------------VATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCC 109
Query: 135 TGHTIVALNLFEEMASGN-----GEFGV-------EGFVDKAKELFLQMKDENINPDVVT 182
G + LF EM +F V EG V +AK+L I D+VT
Sbjct: 110 AGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVT 169
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S+I GFC D + A+ L + M +G + N +++ ++++ CK K++EA L + M
Sbjct: 170 YNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMP 229
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q+G RPN Y+TL+ G TG+V A +LF M++ G + Y I ++G CKN +
Sbjct: 230 QVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLF 289
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ L+ E+ S K D Y+ L L + +VE A++ F ++ ++G+ + T I
Sbjct: 290 EAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMI 349
Query: 363 DGLCKNSYIVEAVELFRTLRILK---CELDIRAYNCLIDG 399
G C+ + +A LF + ++ C DI YN L+ G
Sbjct: 350 HGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRG 389
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 149/318 (46%), Gaps = 21/318 (6%)
Query: 15 PPVCSFNIL---FGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P V S++ L F C K + LF + G+ P+L +N+LI+ CK G+V
Sbjct: 95 PNVISYSSLVHGFCCAGK---LEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEA 151
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
+L ++ + VT+ SLI G C + A LF + GCE N +Y LING
Sbjct: 152 KKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILING 211
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKDENINPD 179
+ A+NL+ EM V+ G V A +LF MK I+ D
Sbjct: 212 YCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVD 271
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
Y + G C EA L E+ + + +++ ++D LCK GK++ A
Sbjct: 272 SCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFK 331
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM---GCTHTVFSYSILINGYC 296
+ Q G++PN N ++ GFC +V++A LF ME M GCT + +Y+ L+ G+C
Sbjct: 332 QLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFC 391
Query: 297 KNKEIEGALSLYGEMLSK 314
++ ++E ++L +M +
Sbjct: 392 ESNKLEEVVNLLHKMFKR 409
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 148/458 (32%), Positives = 234/458 (51%), Gaps = 66/458 (14%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F ML RP P V FN L G + + + D V+SL++++ + D+Y++ ILI CF
Sbjct: 68 LFSDMLRSRPLPS-VIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCF 126
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C ++ G++ + P+ VTFT+L+ GLC + R+ EA LF ++ C P+V
Sbjct: 127 CSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDV 182
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNG----EFGVEGFVD---------------- 162
T+ TL+NGL R G + A+ L + M NG + FVD
Sbjct: 183 LTFTTLMNGLCREGRVVEAVALLDRMVE-NGLQPDQITYGTFVDGMCKMGDTVSALNLLR 241
Query: 163 -----------------------------KAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ LF++M+D+ I P++VTY +I GFC +
Sbjct: 242 KMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCIS 301
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
W+ A+ LL EM+++ + PNVVT+N +++ K GK EA+ L D M+ G+ PN Y
Sbjct: 302 GRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITY 361
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N+++DGFC R++ A+++F M + GC+ VF+++ LI+GYC K I+ + L EM
Sbjct: 362 NSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPR 421
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+G+ + V YNTL + + A L +M GV D T T +DGLC N + +
Sbjct: 422 RGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKD 481
Query: 374 AVELFRTLRILKCEL-----------DIRAYNCLIDGL 400
A+E+F+ ++ K +L D+ YN LI GL
Sbjct: 482 ALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGL 519
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 192/427 (44%), Gaps = 58/427 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L K+ + +LF + G+FP++ TYN +I FC GR S +
Sbjct: 251 PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRL 310
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L +PN VT+ +LI E + EAA L+ ++ G PN TYN++I+G +
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
A ++F MA+ V F +D EL +M + + VT
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 430
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD---------- 232
Y ++I GFC D N A L +M+ GV P++VT N ++D LC NGK+
Sbjct: 431 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 490
Query: 233 ------------------------------------EASRLLDLMIQIGVRPNAFVYNTL 256
EA L + M G+ P+ Y+++
Sbjct: 491 KSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 550
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG C R++ A ++FVSM S + V +++ LINGYCK ++ L L+ EM +GI
Sbjct: 551 IDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGI 610
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
D +IY TL ++ + A +F EM GV DT T R + G + AV
Sbjct: 611 VADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVA 670
Query: 377 LFRTLRI 383
+ L++
Sbjct: 671 MLEDLQM 677
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 150/317 (47%), Gaps = 34/317 (10%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
Y++ + P V +F L K D + L + GL + TYN LI+ FC +
Sbjct: 382 YLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLV 441
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF--------- 116
G ++ + +++ S P+ VT +L+ GLC ++ +A +F ++
Sbjct: 442 GDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHP 501
Query: 117 --GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDE 174
G EP+V TYN LI GL G + +A+EL+ +M
Sbjct: 502 FNGVEPDVLTYNILICGLINEGKFL-----------------------EAEELYEEMPHR 538
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
I PD +TY+S+I G C + +EA + + M + PNVVTFN +++ CK G++D+
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDG 598
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
L M + G+ +A +Y TL+ GF G +N A ++F M S G + ++ G
Sbjct: 599 LELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 658
Query: 295 YCKNKEIEGALSLYGEM 311
+ +E+E A+++ ++
Sbjct: 659 FWSKEELERAVAMLEDL 675
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 4/170 (2%)
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+++A L M++ P+ +N LM R + L+ ME ++S++I
Sbjct: 62 LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI +C ++ ALS +G++ G+ PDVV + TL L H+V A LF ++ R
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR-- 179
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D T+ T ++GLC+ +VEAV L + + D Y +DG+
Sbjct: 180 --PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 60/139 (43%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ + L K D +F + S P++ T+N LIN +CK GRV G +
Sbjct: 542 PDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLEL 601
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R +A+ + +LI G I A +F ++ G P+ T ++ G +
Sbjct: 602 FCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWS 661
Query: 135 TGHTIVALNLFEEMASGNG 153
A+ + E++ G
Sbjct: 662 KEELERAVAMLEDLQMSVG 680
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 51/110 (46%)
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L +G + K +E A+ L+ +ML P V+ +N L + + + + L+ +M+R
Sbjct: 52 LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ D +++ I C S + A+ F L L D+ + L+ GL
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGL 161
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 137/410 (33%), Positives = 224/410 (54%), Gaps = 13/410 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ +L+ P+ FN + G L K+KHY TVLSL +++ G+ P+ T+NILINCF
Sbjct: 55 LFNSLLHQNPTLTAF-EFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCF 113
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C++G + F VL +IL+ + P+ +T + IKG C + +I +A KL G +
Sbjct: 114 CQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQ 173
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
+Y TLINGL + G T AL L + + + V+ A +L+ +
Sbjct: 174 VSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSE 233
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + I+PDVVTY+++IRGF +A L +M+ + ++P+V TFN+++D CK G+
Sbjct: 234 MVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGR 293
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ +A +LD+M+ ++PN +NTL+DGFC ++ K +F M G V +Y
Sbjct: 294 LKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCS 353
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L++GYC K++ A ++ M +G+ +V YN + +I +V++A KLF EM
Sbjct: 354 LMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKH 413
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ D TY + IDGLCK+ I A +L + +I YN +++ L
Sbjct: 414 IIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNAL 463
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 162/327 (49%), Gaps = 35/327 (10%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+N + ++K+KH + L+ + + + PD+ TY+ LI F +G++ + +++
Sbjct: 211 YNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMI 270
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
P+ TF L+ G C E R+ +A + + + +PNV T+NTL++G +
Sbjct: 271 LENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKD---- 326
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
+M G K +F M + I P+VVTY S++ G+C N+A
Sbjct: 327 ------RKMKEG-------------KTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKA 367
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
K + M +GV NV ++N++++ CK K+D+A +L M + P+ YN+L+DG
Sbjct: 368 KKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDG 427
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
C +G+++ A +L M G + +Y+ ++N +L ++ +GI+P+
Sbjct: 428 LCKSGKISYAFQLVNEMHDRGQPPNIITYNSILN------------ALLTKLKDQGIQPN 475
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEM 346
+ L L + ++E A K+F+++
Sbjct: 476 MHTDTILIKGLCQSGKLEAARKVFEDL 502
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 125/274 (45%), Gaps = 35/274 (12%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
VD A LF + +N + ++ + ++ L +M +G+ PN VTFN+
Sbjct: 49 VDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNI 108
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C+ G + A +L ++++G P+ NT + GFCL G++++A + ++G
Sbjct: 109 LINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALG 168
Query: 281 CTHTVFSYSILINGYC-----------------------------------KNKEIEGAL 305
SY LING C K+K + A
Sbjct: 169 FHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAF 228
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
LY EM++K I PDVV Y+ L F + +++ A LF++M + + D +T+ +DG
Sbjct: 229 DLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGF 288
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
CK + +A + + I + ++ +N L+DG
Sbjct: 289 CKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDG 322
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 102/224 (45%), Gaps = 1/224 (0%)
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+ + + Y+S+ F ++ND + A L ++ Q FN I+ L K+
Sbjct: 30 LQKNFIPYSSISTTF-HSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVL 88
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
L M G+ PN +N L++ FC G + A + + MG + + + I G+
Sbjct: 89 SLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGF 148
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
C +I AL+ + ++++ G D V Y TL L ++ + A +L + V +
Sbjct: 149 CLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNA 208
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
Y T IDG+ K+ ++ +A +L+ + + D+ Y+ LI G
Sbjct: 209 VMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRG 252
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 93/194 (47%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ ++ P V +FN L K++ ++F + G+ P++ TY L++ +C +
Sbjct: 303 MMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVK 362
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+V+ + + + T N ++ +I G C ++ +A LF ++ P+V TYN
Sbjct: 363 QVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYN 422
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
+LI+GL ++G A L EM + + L ++KD+ I P++ T T +
Sbjct: 423 SLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLKDQGIQPNMHTDTIL 482
Query: 187 IRGFCYANDWNEAK 200
I+G C + A+
Sbjct: 483 IKGLCQSGKLEAAR 496
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 1/157 (0%)
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
I ++ N Y+++ F + V+ A LF S+ T T F ++ ++ K+K
Sbjct: 28 ILLQKNFIPYSSISTTFH-SNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHT 86
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
LSL +M +GI P+ V +N L ++ + AF + ++ + G D T TFI
Sbjct: 87 VLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIK 146
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G C I +A+ L L LD +Y LI+GL
Sbjct: 147 GFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGL 183
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 24/136 (17%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF+ M + R V S+NI+ K K D + LF ++ + PD+ TYN LI+
Sbjct: 370 IFNTM-SQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGL 428
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTS-----------------------LIKGLCA 99
CK G++S+ F ++ + PN +T+ S LIKGLC
Sbjct: 429 CKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLKDQGIQPNMHTDTILIKGLCQ 488
Query: 100 ESRIMEAAALFTKLRV 115
++ A +F L V
Sbjct: 489 SGKLEAARKVFEDLLV 504
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 143/445 (32%), Positives = 236/445 (53%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M RP P + F+ L +AK +D V+S +++ G+ +LYTYNILINCF
Sbjct: 65 LFGVMAQSRPFPS-IIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCF 123
Query: 63 C----------------KMG-------------------RVSHGFVVLGRILRSCFTPNA 87
C K+G R+S ++ +++ + P+
Sbjct: 124 CRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDT 183
Query: 88 VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
VTFT+LI GL ++ EA AL ++ GC+P++ TY ++NGL + G T +ALNL +
Sbjct: 184 VTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNK 243
Query: 148 MASGNGEFGVEGFV------------DKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M + E V + D A LF +M+++ + P+V+TY+S+I C
Sbjct: 244 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGR 303
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++A LL +M+++ + PN+VTF+ ++D K GK+ +A +L + MI+ + PN F Y++
Sbjct: 304 WSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSS 363
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L++GFC+ R+ AK++ M C V +Y+ LING+CK K ++ + L+ EM +G
Sbjct: 364 LINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRG 423
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ + V Y TL F+ + A +F +M GV + TY +DGLCKN + +A+
Sbjct: 424 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 483
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
+F L+ E DI YN +I+G+
Sbjct: 484 VVFEYLQRSTMEPDIYTYNIMIEGM 508
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 147/274 (53%), Gaps = 18/274 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++ + L K +H D L+LF + + G+ P++ TY+ LI+C C GR S +L
Sbjct: 253 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLS 312
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING---LY 133
++ PN VTF++LI + ++++A L+ ++ +PN+FTY++LING L
Sbjct: 313 DMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLD 372
Query: 134 RTGHTIVALNL------------FEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
R G L L + + +G F VDK ELF +M + + V
Sbjct: 373 RLGEAKQMLELMIRKDCLPNVVTYNTLING---FCKAKRVDKGMELFREMSQRGLVGNTV 429
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT++I GF A D + A+ + +M+ GV PN++T+N+++D LCKNGK+ +A + + +
Sbjct: 430 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 489
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
+ + P+ + YN +++G C G+ FV+
Sbjct: 490 QRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYFVA 523
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 87/171 (50%)
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
++D+A L +M Q P+ ++ L+ + + ME +G +H +++Y+
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
ILIN +C+ + AL+L G+M+ G +PD+V N+L +++ A L D+M
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G DT T+ T I GL ++ EAV L + C+ D+ Y +++GL
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGL 228
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 63/122 (51%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L K K D + LF+ ++ GL + TY LI+ F + + +V
Sbjct: 391 PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 450
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ PN +T+ L+ GLC ++ +A +F L+ EP+++TYN +I G+ +
Sbjct: 451 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Query: 135 TG 136
G
Sbjct: 511 AG 512
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P + ++NIL L KN + +F+ L + + PD+YTYNI+I CK G+ G
Sbjct: 461 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 148/458 (32%), Positives = 234/458 (51%), Gaps = 66/458 (14%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F ML RP P V FN L G + + + D V+SL++++ + D+Y++ ILI CF
Sbjct: 68 LFSDMLRSRPLPS-VIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCF 126
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C ++ G++ + P+ VTFT+L+ GLC + R+ EA LF ++ C P+V
Sbjct: 127 CSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDV 182
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNG----EFGVEGFVD---------------- 162
T+ TL+NGL R G + A+ L + M NG + FVD
Sbjct: 183 LTFTTLMNGLCREGRVVEAVALLDRMVE-NGLQPDQITYGTFVDGMCKMGDTVSALNLLR 241
Query: 163 -----------------------------KAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ LF++M+D+ I P++VTY +I GFC +
Sbjct: 242 KMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCIS 301
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
W+ A+ LL EM+++ + PNVVT+N +++ K GK EA+ L D M+ G+ PN Y
Sbjct: 302 GRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITY 361
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N+++DGFC R++ A+++F M + GC+ VF+++ LI+GYC K I+ + L EM
Sbjct: 362 NSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPR 421
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+G+ + V YNTL + + A L +M GV D T T +DGLC N + +
Sbjct: 422 RGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKD 481
Query: 374 AVELFRTLRILKCEL-----------DIRAYNCLIDGL 400
A+E+F+ ++ K +L D+ YN LI GL
Sbjct: 482 ALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGL 519
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 193/431 (44%), Gaps = 58/431 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L K+ + +LF + G+FP++ TYN +I FC GR S +
Sbjct: 251 PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRL 310
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L +PN VT+ +LI E + EAA L+ ++ G PN TYN++I+G +
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
A ++F MA+ V F +D EL +M + + VT
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 430
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD---------- 232
Y ++I GFC D N A L +M+ GV P++VT N ++D LC NGK+
Sbjct: 431 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 490
Query: 233 ------------------------------------EASRLLDLMIQIGVRPNAFVYNTL 256
EA L + M G+ P+ Y+++
Sbjct: 491 KSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 550
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG C R++ A ++FVSM S + V +++ LINGYCK ++ L L+ EM +GI
Sbjct: 551 IDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGI 610
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
D +IY TL ++ + A +F EM GV DT T R + G + AV
Sbjct: 611 VADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVA 670
Query: 377 LFRTLRILKCE 387
+ L+ + E
Sbjct: 671 MLEDLQRYQLE 681
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 172/365 (47%), Gaps = 31/365 (8%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V ++N L K + L+ + G+ P+ TYN +I+ FCK R+
Sbjct: 317 RKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDA 376
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ + +P+ TFT+LI G C RI + L ++ G N TYNTLI+
Sbjct: 377 AEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIH 436
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGV-----------EGFVDKAK-----ELFLQMKDE 174
G G AL+L ++M S GV +G D K E+F M+
Sbjct: 437 GFCLVGDLNAALDLSQQMISS----GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKS 492
Query: 175 NIN-----------PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
++ PDV+TY +I G + EA+ L EM +G+ P+ +T++ ++D
Sbjct: 493 KMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 552
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
LCK ++DEA+++ M PN +NTL++G+C GRV+ ELF M G
Sbjct: 553 GLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVA 612
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
Y LI G+ K I GAL ++ EM+S G+ PD + + + ++ERA +
Sbjct: 613 DAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAML 672
Query: 344 DEMQR 348
+++QR
Sbjct: 673 EDLQR 677
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 150/317 (47%), Gaps = 34/317 (10%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
Y++ + P V +F L K D + L + GL + TYN LI+ FC +
Sbjct: 382 YLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLV 441
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF--------- 116
G ++ + +++ S P+ VT +L+ GLC ++ +A +F ++
Sbjct: 442 GDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHP 501
Query: 117 --GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDE 174
G EP+V TYN LI GL G + +A+EL+ +M
Sbjct: 502 FNGVEPDVLTYNILICGLINEGKFL-----------------------EAEELYEEMPHR 538
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
I PD +TY+S+I G C + +EA + + M + PNVVTFN +++ CK G++D+
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDG 598
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
L M + G+ +A +Y TL+ GF G +N A ++F M S G + ++ G
Sbjct: 599 LELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 658
Query: 295 YCKNKEIEGALSLYGEM 311
+ +E+E A+++ ++
Sbjct: 659 FWSKEELERAVAMLEDL 675
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 4/170 (2%)
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+++A L M++ P+ +N LM R + L+ ME ++S++I
Sbjct: 62 LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI +C ++ ALS +G++ G+ PDVV + TL L H+V A LF ++ R
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR-- 179
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D T+ T ++GLC+ +VEAV L + + D Y +DG+
Sbjct: 180 --PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 51/110 (46%)
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L +G + K +E A+ L+ +ML P V+ +N L + + + + L+ +M+R
Sbjct: 52 LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ D +++ I C S + A+ F L L D+ + L+ GL
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGL 161
>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 595
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 139/409 (33%), Positives = 222/409 (54%), Gaps = 13/409 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
+ M+ M+P P V FN+LFG +AK KHY T +SL K ++ G+ P++ T+NI+INC C
Sbjct: 66 YHKMVTMKPFPC-VKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNIVINCLC 124
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
++ GF VLG + + P+ VTFT+++ GLC E + +A L+ G E + +
Sbjct: 125 RLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRY 184
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
T +INGL + GH+ AL+ ++M N V +G V +A +LF QM
Sbjct: 185 TRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQM 244
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I PD+ TY +I G C + W EA LL MM +G+ P+V TFNVI K G +
Sbjct: 245 TGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMI 304
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
A + M +G+ + Y++++ C+ ++ A E+F M GC + +Y+ L
Sbjct: 305 SRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSL 364
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I+G+C+ K + A+ GEM++ G+ P++V +NTL + + A +LF M + G
Sbjct: 365 IHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQ 424
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D T +DGL K + EA+ LFR L + +LDI Y+ +++G+
Sbjct: 425 LPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGM 473
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 180/398 (45%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +F + L + + L G D YT +IN CK+G S
Sbjct: 146 PSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSY 205
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ + + +++ GLC + + EA LF+++ G +P++FTYN LI+GL
Sbjct: 206 LKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCN 265
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
A L M G F G + +AK +F M I DVVT
Sbjct: 266 FDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVT 325
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+S+I C N +A + M+ +G PN+VT+ ++ C+ M++A L M+
Sbjct: 326 YSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMV 385
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ PN +NTL+ GFC G+ AKELF M G + + +I+++G K
Sbjct: 386 NNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHS 445
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+SL+ E+ D++IY+ + + ++ A +LF + GV D TY I
Sbjct: 446 EAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMI 505
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+GLCK + +A +L + C D YN + GL
Sbjct: 506 NGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGL 543
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 172/366 (46%), Gaps = 20/366 (5%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
L K H LS K++ D+ YN +++ CK G V + + ++ P+
Sbjct: 193 LCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPD 252
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
T+ LI GLC R EAA L + G P+V T+N + +TG A ++F
Sbjct: 253 LFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFS 312
Query: 147 EMASGNGEFGVEGFV----------------DKAKELFLQMKDENINPDVVTYTSVIRGF 190
M G G+E V A E+F M + P++VTYTS+I G+
Sbjct: 313 FM----GHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGW 368
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C + N+A L EM++ G+ PN+VT+N ++ CK GK A L +M + G P+
Sbjct: 369 CEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDL 428
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
++DG + A LF +E M + YSI++NG C + ++ AL L+
Sbjct: 429 QTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSY 488
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
+ SKG+K DVV YN + L + ++ A L +M+ +G D TY F+ GL +
Sbjct: 489 LSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYE 548
Query: 371 IVEAVE 376
I ++ +
Sbjct: 549 ISKSTK 554
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 144/299 (48%), Gaps = 14/299 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FN++ G K S+F + G+ D+ TY+ +I C + ++ V
Sbjct: 286 PDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEV 345
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++R PN VT+TSLI G C + +A ++ G +PN+ T+NTLI G +
Sbjct: 346 FDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCK 405
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G + A LF M +G F F +A LF +++ N + D++
Sbjct: 406 AGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCH-FHSEAMSLFRELEKMNSDLDII 464
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y+ ++ G C + N+A L + +GV+ +VVT+N++++ LCK G +D+A LL M
Sbjct: 465 IYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKM 524
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+ G P+ YN + G ++++ + + M+ G + +LIN + NKE
Sbjct: 525 EENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLINYFSANKE 583
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
++++ P + + I+ L K + +SLF+ L D+ Y+I++N C
Sbjct: 417 FVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSS 476
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
G+++ + + + VT+ +I GLC E + +A L K+ GC P+ TY
Sbjct: 477 GKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTY 536
Query: 126 NTLINGLYR 134
N + GL R
Sbjct: 537 NVFVQGLLR 545
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/390 (36%), Positives = 211/390 (54%), Gaps = 13/390 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML P PPP+ F+ L G + + HY T +SLF +L+S G+ P + T ILINC+C
Sbjct: 43 FNRMLRKHP-PPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYC 101
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+S F +LG IL+ F PN VTF +LI G C + +A A L G + F
Sbjct: 102 HQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEF 161
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASG-------NGEFGVEGF-----VDKAKELFLQM 171
+Y +LINGL + G T AL L ++M ++G + A LF +
Sbjct: 162 SYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLV 221
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
I DVV Y S+I G C W EA LL M+ + P+ TFN+++D LCK G++
Sbjct: 222 TSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRI 281
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA + +M++ G +P+ YN LM+GFCL+ V+ A+ELF M G V +Y++L
Sbjct: 282 VEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVL 341
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
INGYCK ++ A+ L+ E+ K + P++ YN+L L ++ ++ +L DEM G
Sbjct: 342 INGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQ 401
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+ D TY F+D CK+ +A+ LFR +
Sbjct: 402 SPDIVTYNIFLDAFCKSKPYEKAISLFRQI 431
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 195/398 (48%), Gaps = 13/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +FN L N ++ L + G D ++Y LIN CK G+ +
Sbjct: 123 PNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQL 182
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ PN +T++++I GLC + I +A LF+ + G +V YN+LI+G
Sbjct: 183 LQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCS 242
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G A L M GN EG + +A+ +F M PD+VT
Sbjct: 243 VGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVT 302
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++ GFC +N+ +EA+ L M+ +G++P+V+ +NV+++ CK +DEA L +
Sbjct: 303 YNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIR 362
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ PN YN+L+DG C GR++ +EL M G + + +Y+I ++ +CK+K E
Sbjct: 363 CKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYE 422
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+SL+ +++ +GI PD +Y+ + + +++ A + + G + TY I
Sbjct: 423 KAISLFRQIV-QGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMI 481
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ LCK+ EA+ L + C D + +I L
Sbjct: 482 NALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGAL 519
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 180/352 (51%), Gaps = 13/352 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +++ + L K++ L LF + S G+ D+ YN LI+ C +G+ +
Sbjct: 193 PNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRL 252
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++R P+ TF L+ LC E RI+EA +F + G +P++ TYN L+ G
Sbjct: 253 LTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCL 312
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
+ + A LF M E V + VD+A LF +++ +N+ P++ T
Sbjct: 313 SNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLAT 372
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S+I G C + + L+ EM D+G P++VT+N+ +D CK+ ++A L ++
Sbjct: 373 YNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIV 432
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q G+ P+ ++Y+ +++ FC ++ A+E + GC V +Y+I+IN CK+ +
Sbjct: 433 Q-GIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFD 491
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
A++L +M PD V + T+ L E ++ ++A KL EM G+ D
Sbjct: 492 EAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVND 543
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 178/380 (46%), Gaps = 27/380 (7%)
Query: 24 FGCLAKNKHY---DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
FG L K + DT+LS F R+ P ++ ++ L+ +MG + ++
Sbjct: 25 FGHLHPPKFHTVDDTLLS-FNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHS 83
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
TP+ T T LI C ++ + A +L + G +PN+ T+NTLING
Sbjct: 84 KGITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLING--------- 134
Query: 141 ALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
F + G V KA L + + D +Y S+I G C +A
Sbjct: 135 --------------FCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDAL 180
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
LL +M + V+PN++T++ ++D LCK+ + +A RL L+ G+ + YN+L+ G
Sbjct: 181 QLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGC 240
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
C G+ A L M ++++IL++ CK I A ++ M+ +G KPD+
Sbjct: 241 CSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDI 300
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
V YN L + V A +LF+ M + G+ D Y I+G CK + EA+ LF+
Sbjct: 301 VTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKE 360
Query: 381 LRILKCELDIRAYNCLIDGL 400
+R ++ YN LIDGL
Sbjct: 361 IRCKNLVPNLATYNSLIDGL 380
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 119/278 (42%), Gaps = 25/278 (8%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ R P + ++N L + + LF R+ GL PD+ YN+LIN +
Sbjct: 287 VFAVMMK-RGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGY 345
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK+ V V+ I PN T+ SLI GLC R+ L ++ G P++
Sbjct: 346 CKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDI 405
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TYN ++ ++ A++LF ++ G I PD
Sbjct: 406 VTYNIFLDAFCKSKPYEKAISLFRQIVQG------------------------IWPDFYM 441
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++ FC A+ L ++ G PNV T+ ++++ LCK+ DEA LL M
Sbjct: 442 YDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMD 501
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
P+A + T++ ++A++L + M G
Sbjct: 502 DNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERG 539
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/397 (35%), Positives = 220/397 (55%), Gaps = 14/397 (3%)
Query: 16 PVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVL 75
P+ FN + G L K K+Y TV+SL K+++ G+ +L T +ILINCFC +G+++ F +L
Sbjct: 9 PIIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLL 68
Query: 76 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRT 135
G+IL+ + PN +T+T+L+KGLC + + + K+ + N +Y TL+NGL +T
Sbjct: 69 GKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKT 128
Query: 136 GHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTY 183
G T A+ L + + V + V++A +L+ +M I P+V+TY
Sbjct: 129 GETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITY 188
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
++I FC A A LL EM+ + + P+V TF++++D LCK GK A ++ M+Q
Sbjct: 189 NTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQ 246
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
+GV PN + YN +++G C RV+ A L M +Y+ LI+G CK+ I
Sbjct: 247 MGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITS 306
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
AL+L EM +G DVV Y +L L + +++A LF +M+ G+ +TY ID
Sbjct: 307 ALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALID 366
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GLCK + A ELF+ L + C +D+ Y +I GL
Sbjct: 367 GLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGL 403
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 175/345 (50%), Gaps = 25/345 (7%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ R + P V ++ + L K+K + L+ +++ +FP++ TYN LI FC G
Sbjct: 140 MIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAG 199
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
++ F +L ++ P+ TF+ LI LC E + A +F + G PNV++YN
Sbjct: 200 QLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYN 257
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
+INGL + A+NL EM +N+ PD VTY S+
Sbjct: 258 IMINGLCKCKRVDEAMNLLREMLH-----------------------KNMVPDTVTYNSL 294
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G C + A L+ EM +G +VVT+ ++D LCKN +D+A+ L M + G+
Sbjct: 295 IDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGI 354
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+P + Y L+DG C GR+ A+ELF + GC V++Y+++I+G CK + AL+
Sbjct: 355 QPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALA 414
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
+ +M G P+ V + + LFE + ++A KL EM G+
Sbjct: 415 IKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/434 (30%), Positives = 223/434 (51%), Gaps = 49/434 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ + L K + D + + + G+ PD TYN +++ +C G+
Sbjct: 234 PDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGT 293
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ PN VT++SL+ LC R EA +F + G EP++ TY TL+ G Y
Sbjct: 294 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQG-YA 352
Query: 135 TGHTIVALNLFEEMASGNG--------------------------------EFGV----- 157
T +V ++ ++ NG + G+
Sbjct: 353 TKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVV 412
Query: 158 -----------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
G VD A F QM DE + P+++ YTS+I G C + W++A+ L++EM
Sbjct: 413 CYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEM 472
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+D+G+ N + FN I+D CK G++ E+ +L DLM++IGV+P+ YNTL+DG CL G++
Sbjct: 473 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKM 532
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ A +L SM S+G + +Y LINGYC+ ++ AL+L+ EM+S G+ P+++ YN +
Sbjct: 533 DEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 592
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
LF + A +L+ + + G + TY + GLCKN+ EA+ +F+ L +
Sbjct: 593 LQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDL 652
Query: 387 ELDIRAYNCLIDGL 400
+L+ R +N +I L
Sbjct: 653 QLETRTFNIMIGAL 666
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 134/417 (32%), Positives = 207/417 (49%), Gaps = 21/417 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG---LFPDLYTYNILI 59
+FD +L R + N +A++ V S + R+ G + P ++TY ILI
Sbjct: 42 VFDELLR-RGRGASIYGLNRALADVARHSPAAAV-SRYNRMARAGAGKVTPTVHTYAILI 99
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGC 118
C C+ GR+ GF LG +++ F +A+TFT L+KGLCA+ R +A + ++ GC
Sbjct: 100 GCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGC 159
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE---------------FGVEGFVDK 163
P+VF+YN L+ GL + AL L MA G F EG DK
Sbjct: 160 IPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDK 219
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
A + +M D I PDVVTY+S+I C A ++A +L M+ GV P+ +T+N I+
Sbjct: 220 AYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 279
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
C +G+ EA L M GV PN Y++LM+ C GR A+++F SM G
Sbjct: 280 GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEP 339
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
+ +Y L+ GY + +L M+ GI+PD ++N L + +V++A +F
Sbjct: 340 DIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVF 399
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+M++ G+ + Y T ID LCK+ + +A+ F + +I Y LI GL
Sbjct: 400 SKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGL 456
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 108/248 (43%), Gaps = 13/248 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+ + P + ++ GC K D L + S G+ PD+ TY LIN +
Sbjct: 503 LFDLMVRIGVKPDIITYNTLIDGCCLAGK-MDEATKLLASMVSVGVKPDIVTYGTLINGY 561
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C++ R+ + ++ S +PN +T+ +++GL R A L+ + G + +
Sbjct: 562 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLEL 621
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQ 170
TYN +++GL + T AL +F+ + + + F +D+AK+LF
Sbjct: 622 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAA 681
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ PDV TY+ + E L + M + G + N I+ +L + G
Sbjct: 682 HSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGD 741
Query: 231 MDEASRLL 238
+ A L
Sbjct: 742 ITRAGTYL 749
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 141/425 (33%), Positives = 228/425 (53%), Gaps = 64/425 (15%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F +M+ RP P + F L +AK K +D V++L L G+ DLYT N+L+NCF
Sbjct: 59 LFTHMVESRPLPS-IIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCF 117
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ + LG++++ F P+ VTFTSLI G C +R+ EA ++ ++ G +P+V
Sbjct: 118 CQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDV 177
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
Y T+I+ L + GH AL+LF+ QM++ I PDVV
Sbjct: 178 VMYTTIIDSLCKNGHVNYALSLFD-----------------------QMENYGIRPDVVM 214
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YTS++ G C + W +A LL M + ++P+V+TFN ++D K GK +A L + MI
Sbjct: 215 YTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI 274
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
++ + PN F Y +L++GFC+ G V+ A+++F ME+ GC V +Y+ LING+CK K+++
Sbjct: 275 RMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVD 334
Query: 303 GALSLYGE-----------------------------------MLSKGIKPDVVIYNTLF 327
A+ ++ E M+S+G+ P++ YN L
Sbjct: 335 DAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLL 394
Query: 328 VVLFEIHQVERAFKLFDEMQR---DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
L +V++A +F++MQ+ DGVA + WTY + GLC N + +A+ +F +R
Sbjct: 395 HCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMR-- 452
Query: 385 KCELD 389
K E+D
Sbjct: 453 KREMD 457
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 184/354 (51%), Gaps = 17/354 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + + L KN H + LSLF ++ + G+ PD+ Y L+N C GR +
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + P+ +TF +LI E + ++A L+ ++ PN+FTY +LING
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM 294
Query: 135 TGHTIVALNLFEEMASGNGEFG--------VEGF-----VDKAKELFLQMKDENINPDVV 181
G A +F M + G F + GF VD A ++F +M + + + +
Sbjct: 295 EGCVDEARQMFYLMET-KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT++I+GF N A+ + M+ +GV PN+ T+NV++ LC NGK+ +A + + M
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
Query: 242 IQI---GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
+ GV PN + YN L+ G C G++ +A +F M + +Y+I+I G CK
Sbjct: 414 QKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKA 473
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
+++ A++L+ + SKG+KP+VV Y T+ LF A LF +M+ DGV+
Sbjct: 474 GKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 111/217 (51%)
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++R ++ +NEA L M++ P+++ F +++ + K K D L D +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+GV + + N LM+ FC + + A M +G + +++ LING+C +E
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+S+ +M+ GIKPDVV+Y T+ L + V A LFD+M+ G+ D Y + +
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+GLC + +A L R + K + D+ +N LID
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDA 256
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 127/273 (46%), Gaps = 35/273 (12%)
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
++A +LF M + P ++ +T ++ ++ L + GV ++ T N++
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
M+ C++ + AS L M+++G P+ + +L++GFCL R+ A + M MG
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL--------------- 326
V Y+ +I+ CKN + ALSL+ +M + GI+PDVV+Y +L
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 327 ----------------FVVLFEIHQVERAF----KLFDEMQRDGVAADTWTYRTFIDGLC 366
F L + E F +L++EM R +A + +TY + I+G C
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ EA ++F + C D+ AY LI+G
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLING 326
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 3/173 (1%)
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
+GK SRLLDL + N Y ++ + + N A +LF M ++
Sbjct: 18 SGKALSFSRLLDLSFWVRAFCN---YREILRNGLHSLQFNEALDLFTHMVESRPLPSIID 74
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
++ L+N K K+ + ++L + G+ D+ N L + Q A +M
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ G D T+ + I+G C + + EA+ + + + + D+ Y +ID L
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSL 187
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 133/434 (30%), Positives = 223/434 (51%), Gaps = 49/434 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ + L K + D + + + G+ PD TYN +++ +C G+
Sbjct: 234 PDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGT 293
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ PN VT++SL+ LC R EA +F + G EP++ TY TL+ G Y
Sbjct: 294 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQG-YA 352
Query: 135 TGHTIVALNLFEEMASGNG--------------------------------EFGV----- 157
T +V ++ ++ NG + G+
Sbjct: 353 TKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVV 412
Query: 158 -----------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
G VD A F QM DE + P+++ YTS+I G C + W++A+ L++EM
Sbjct: 413 CYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEM 472
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+D+G+ N + FN I+D CK G++ E+ +L DLM++IGV+P+ YNTL+DG CL G++
Sbjct: 473 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKM 532
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ A +L SM S+G + +Y LINGYC+ ++ AL+L+ EM+S G+ P+++ YN +
Sbjct: 533 DEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 592
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
LF + A +L+ + + G + TY + GLCKN+ EA+ +F+ L +
Sbjct: 593 LQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDL 652
Query: 387 ELDIRAYNCLIDGL 400
+L+ R +N +I L
Sbjct: 653 QLETRTFNIMIGAL 666
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 134/417 (32%), Positives = 207/417 (49%), Gaps = 21/417 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG---LFPDLYTYNILI 59
+FD +L R + N +A++ V S + R+ G + P ++TY ILI
Sbjct: 42 VFDELLR-RGRGASIYGLNRALADVARHSPAAAV-SRYNRMARAGAGKVTPTVHTYAILI 99
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGC 118
C C+ GR+ GF LG +++ F +A+TFT L+KGLCA+ R +A + ++ GC
Sbjct: 100 GCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGC 159
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE---------------FGVEGFVDK 163
P+VF+YN L+ GL + AL L MA G F EG DK
Sbjct: 160 IPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDK 219
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
A + +M D I PDVVTY+S+I C A ++A +L M+ GV P+ +T+N I+
Sbjct: 220 AYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 279
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
C +G+ EA L M GV PN Y++LM+ C GR A+++F SM G
Sbjct: 280 GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEP 339
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
+ +Y L+ GY + +L M+ GI+PD ++N L + +V++A +F
Sbjct: 340 DIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVF 399
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+M++ G+ + Y T ID LCK+ + +A+ F + +I Y LI GL
Sbjct: 400 SKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGL 456
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 108/248 (43%), Gaps = 13/248 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+ + P + ++ GC K D L + S G+ PD+ TY LIN +
Sbjct: 503 LFDLMVRIGVKPDIITYNTLIDGCCLAGK-MDEATKLLASMVSVGVKPDIVTYGTLINGY 561
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C++ R+ + ++ S +PN +T+ +++GL R A L+ + G + +
Sbjct: 562 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLEL 621
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQ 170
TYN +++GL + T AL +F+ + + + F +D+AK+LF
Sbjct: 622 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAA 681
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ PDV TY+ + E L + M + G + N I+ +L + G
Sbjct: 682 HSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGD 741
Query: 231 MDEASRLL 238
+ A L
Sbjct: 742 ITRAGTYL 749
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 134/398 (33%), Positives = 221/398 (55%), Gaps = 27/398 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P + F+ + +AK+K+YD V+SLF + G+ DLY+YNI+INC
Sbjct: 56 LFCKMIQSRP-LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ R V+G++++ + P+ VT +SLI G C +R+ +A L +K+ G P+V
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
YNT+I+G + G V+ A ELF +M+ + + D VT
Sbjct: 175 VIYNTIIDGSCKIG-----------------------LVNDAVELFDRMERDGVRADAVT 211
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S++ G C + W++A L+ +M+ + + PNV+TF ++D K GK EA +L + M
Sbjct: 212 YNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMT 271
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ V P+ F YN+L++G C+ GRV+ AK++ M + GC V +Y+ LING+CK+K ++
Sbjct: 272 RRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
L+ EM +G+ D + YNT+ F+ + + A ++F M + TY +
Sbjct: 332 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILL 388
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GLC N + +A+ LF ++ + ELDI YN +I G+
Sbjct: 389 YGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGM 426
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 165/357 (46%), Gaps = 47/357 (13%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ P V +++ G N+ +D + L ++ G PD+ YN +I+ CK+G
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAI-DLVSKMEEMGFRPDVVIYNTIIDGSCKIG 188
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
V+ + R+ R +AVT+ SL+ GLC R +AA L + + PNV T+
Sbjct: 189 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 248
Query: 127 TLINGLYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKD 173
+I+ + G A+ L+EEM NG + G VD+AK++ M
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING-LCMHGRVDEAKQMLDLMVT 307
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV---------------------- 211
+ PDVVTY ++I GFC + +E L EM +G+
Sbjct: 308 KGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDA 367
Query: 212 ----------QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
+PN+ T+++++ LC N ++++A L + M + + + YN ++ G C
Sbjct: 368 AQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMC 427
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G V A +LF S+ G V SY+ +I+G+C+ ++ + + LY +M G+ P
Sbjct: 428 KIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 123/269 (45%), Gaps = 35/269 (13%)
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
+LF +M P +V ++ V+ + +++ L M G+ ++ ++N++++ L
Sbjct: 55 DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
C+ + A ++ M++ G P+ ++L++GFC RV A +L ME MG V
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL------------------- 326
Y+ +I+G CK + A+ L+ M G++ D V YN+L
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRD 234
Query: 327 ------------FVVLFEIHQVE----RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
F + ++ E A KL++EM R V D +TY + I+GLC +
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ EA ++ + C D+ YN LI+G
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLING 323
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 82/170 (48%)
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
++E L MIQ P+ ++ ++ + + LF ME G H ++SY+I
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+IN C+ ALS+ G+M+ G +PDVV ++L + ++V A L +M+ G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D Y T IDG CK + +AVELF + D YN L+ GL
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGL 219
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 133/394 (33%), Positives = 219/394 (55%), Gaps = 27/394 (6%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ RP P + F+ + +AK+K+YD V+SLF + G+ DLY+YNI+INC C+
Sbjct: 1 MIQSRP-LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 59
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
R V+G++++ + P+ VT +SLI G C +R+ +A L +K+ G P+V YN
Sbjct: 60 RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYN 119
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
T+I+G + G V+ A ELF +M+ + + D VTY S+
Sbjct: 120 TIIDGSCKIG-----------------------LVNDAVELFDRMERDGVRADAVTYNSL 156
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
+ G C + W++A L+ +M+ + + PNV+TF ++D K GK EA +L + M + V
Sbjct: 157 VAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCV 216
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+ F YN+L++G C+ GRV+ AK++ M + GC V +Y+ LING+CK+K ++
Sbjct: 217 DPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTK 276
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L+ EM +G+ D + YNT+ F+ + + A ++F M + TY + GLC
Sbjct: 277 LFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLC 333
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
N + +A+ LF ++ + ELDI YN +I G+
Sbjct: 334 MNWRVEKALVLFENMQKSEIELDITTYNIVIHGM 367
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 165/357 (46%), Gaps = 47/357 (13%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ P V +++ G N+ +D + L ++ G PD+ YN +I+ CK+G
Sbjct: 71 MMKFGYEPDVVTVSSLINGFCQGNRVFDAI-DLVSKMEEMGFRPDVVIYNTIIDGSCKIG 129
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
V+ + R+ R +AVT+ SL+ GLC R +AA L + + PNV T+
Sbjct: 130 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 189
Query: 127 TLINGLYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKD 173
+I+ + G A+ L+EEM NG + G VD+AK++ M
Sbjct: 190 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING-LCMHGRVDEAKQMLDLMVT 248
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV---------------------- 211
+ PDVVTY ++I GFC + +E L EM +G+
Sbjct: 249 KGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDA 308
Query: 212 ----------QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
+PN+ T+++++ LC N ++++A L + M + + + YN ++ G C
Sbjct: 309 AQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMC 368
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G V A +LF S+ G V SY+ +I+G+C+ ++ + + LY +M G+ P
Sbjct: 369 KIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 133/380 (35%), Positives = 211/380 (55%), Gaps = 12/380 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +FN L L + + S G P +YT+ +++N CK+G+ S V
Sbjct: 172 PSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVW 231
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ +++ P V+++ +I LC + EA LF +R G P V TYN+LI G+
Sbjct: 232 MKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCN 291
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
+G A LF+EM N + V EG V +A +F +M + PD+VT
Sbjct: 292 SGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVT 351
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+S+I G C ++ W E+ LL EM+ + ++P+VVTF++ +D CK G + EA +++LMI
Sbjct: 352 YSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMI 411
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+RPN YN+LMDG+CL +++ A+++F M + GC V SY+ILI GYCK++ I+
Sbjct: 412 ERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERID 471
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ EM KG+ P+ + + TL L + + A +LF +M G D TY T +
Sbjct: 472 EAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLL 531
Query: 363 DGLCKNSYIVEAVELFRTLR 382
G CK+ ++ EA+ LF L+
Sbjct: 532 SGFCKHGHLDEALALFEALK 551
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/443 (32%), Positives = 231/443 (52%), Gaps = 48/443 (10%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ M++M P P + FN L L + KHYD+V+S+++++ G+ +YT ILINC C
Sbjct: 92 FNQMVHMNPFPC-ITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLC 150
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ V GF VLG+I + F P+ +TF +LI GLC E RI+EA + G +P V+
Sbjct: 151 HLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVY 210
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQM 171
T+ ++NGL + G T A+ ++M + E V + V++A +LF M
Sbjct: 211 THTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHM 270
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+P VVTY S+I G C + W +A L EM++ ++P+VVTF++++D LCK G +
Sbjct: 271 RSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVV 330
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDG-------------------------------- 259
EA + MIQI + P+ Y++L+ G
Sbjct: 331 LEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIW 390
Query: 260 ---FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
FC G V+ A+ + M G V +Y+ L++GYC + +++ A ++ M++KG
Sbjct: 391 VDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGC 450
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
PDV+ YN L + +++ A +LFDEM G+ ++ T+ T I GLC+ A E
Sbjct: 451 APDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKE 510
Query: 377 LFRTLRILKCELDIRAYNCLIDG 399
LF+ + C D+ Y+ L+ G
Sbjct: 511 LFKKMGSHGCPPDLITYSTLLSG 533
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 203/376 (53%), Gaps = 23/376 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S++I+ L KN+ + + LF + S G+ P + TYN LI C G+ ++
Sbjct: 242 PEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASIL 301
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+L P+ VTF+ L+ LC E ++EA ++F K+ EP++ TY++LI+G+ +
Sbjct: 302 FKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCK 361
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ +L++E ++ L +M NI PDVVT++ + FC
Sbjct: 362 S-------SLWKESST----------------LLNEMLSRNIRPDVVTFSIWVDVFCKKG 398
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+EA+ ++ M+++G++PNVVT+N +MD C + +MDEA ++ D+M+ G P+ YN
Sbjct: 399 MVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYN 458
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ G+C + R++ AK+LF M G T +++ LI+G C+ A L+ +M S
Sbjct: 459 ILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSH 518
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G PD++ Y+TL + ++ A LF+ +++ + + + + G+CK + +A
Sbjct: 519 GCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDA 578
Query: 375 VELFRTLRILKCELDI 390
ELF +L I + + D+
Sbjct: 579 KELFSSLSIEELQPDV 594
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 141/296 (47%), Gaps = 23/296 (7%)
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKA 164
+A A F ++ P + +N L+ L R H ++++ +M
Sbjct: 87 DALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKM---------------- 130
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
E F ++ V T T +I C+ + +L ++ G +P+++TFN +++
Sbjct: 131 -EFF------GVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLING 183
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
LC G++ EA LD ++ G +P + + +++G C G+ + A M + C
Sbjct: 184 LCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPE 243
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
V SYSI+I+ CKN+ + A+ L+ M S GI P VV YN+L + Q ++A LF
Sbjct: 244 VVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFK 303
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
EM + D T+ +D LCK ++EA+ +F + + E DI Y+ LI G+
Sbjct: 304 EMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGV 359
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 103/239 (43%), Gaps = 35/239 (14%)
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
D A F QM N P + + ++ ++ + +M GV +V T ++
Sbjct: 86 DDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTIL 145
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
++ LC + +L + ++G +P+ +NTL++G C+ GR+ A E + S G
Sbjct: 146 INCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGY 205
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
TV+++++++NG CK + A+ +M+ +P+VV
Sbjct: 206 QPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVV-------------------- 245
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+Y ID LCKN + EAV+LF +R + + YN LI G+
Sbjct: 246 ---------------SYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGM 289
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 148/460 (32%), Positives = 231/460 (50%), Gaps = 64/460 (13%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG---LFPDLYTYNILI 59
+FD +L R + N +A++ V S + R+ G + P ++TY ILI
Sbjct: 42 VFDELLR-RGRGASIYGLNRALADVARHSPAAAV-SRYNRMARAGAGKVTPTVHTYAILI 99
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGC 118
C C+ GR+ GF LG +++ F +A+TFT L+KGLCA+ R +A + ++ GC
Sbjct: 100 GCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGC 159
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE---------------FGVEGF--- 160
P+VF+YN L+ GL + AL L MA G F EG
Sbjct: 160 IPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTK 219
Query: 161 -----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNV 215
+DKA E+ M + PD +TY S++ G+C + EA L +M GV+PNV
Sbjct: 220 LTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNV 279
Query: 216 VTFNVIMDELCKNGKMDEA-----------------------------------SRLLDL 240
VT++ +M+ LCKNG+ EA +L DL
Sbjct: 280 VTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDL 339
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M++IGV+P+ YNTL+DG CL G+++ A +L SM S+G + +Y LINGYC+
Sbjct: 340 MVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSR 399
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
++ AL+L+ EM+S G+ P+++ YN + LF + A +L+ + + G + TY
Sbjct: 400 MDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNI 459
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ GLCKN+ EA+ +F+ L + +L+ R +N +I L
Sbjct: 460 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 499
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 186/396 (46%), Gaps = 31/396 (7%)
Query: 13 SPPPVCSFNILFGCLAKN--------KHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCK 64
SPP V S+N + K + D + + + G+ PD TYN +++ +C
Sbjct: 197 SPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 256
Query: 65 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFT 124
G+ L ++ PN VT++SL+ LC R EA +F + G EP++ T
Sbjct: 257 SGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIAT 316
Query: 125 YNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
Y TL+ G + G I + LF+ M GV+ PD++TY
Sbjct: 317 YRTLLQGHCKEGRVIESEKLFDLMV----RIGVK-------------------PDIITYN 353
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
++I G C A +EA LL M+ GV+P++VT+ +++ C+ +MD+A L M+
Sbjct: 354 TLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSS 413
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
GV PN YN ++ G T R AKEL+VS+ G + +Y+I+++G CKN + A
Sbjct: 414 GVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEA 473
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L ++ + ++ + +N + L + +++ A LF +G+ D TY +
Sbjct: 474 LRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAEN 533
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
L + + E +LF ++ C D R N ++ L
Sbjct: 534 LIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKL 569
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 108/248 (43%), Gaps = 13/248 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+ + P + ++ GC K D L + S G+ PD+ TY LIN +
Sbjct: 336 LFDLMVRIGVKPDIITYNTLIDGCCLAGK-MDEATKLLASMVSVGVKPDIVTYGTLINGY 394
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C++ R+ + ++ S +PN +T+ +++GL R A L+ + G + +
Sbjct: 395 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLEL 454
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQ 170
TYN +++GL + T AL +F+ + + + F +D+AK+LF
Sbjct: 455 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAA 514
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ PDV TY+ + E L + M + G + N I+ +L + G
Sbjct: 515 HSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGD 574
Query: 231 MDEASRLL 238
+ A L
Sbjct: 575 ITRAGTYL 582
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 139/448 (31%), Positives = 227/448 (50%), Gaps = 50/448 (11%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ ++ ML+ R SP V ++N + L K + D + + + +G+ PD TYN +++
Sbjct: 108 YSTYNEMLDQRISPN-VVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVH 166
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
FC G+ V L ++ P+ VT+ SL+ LC R EA +F + G +P
Sbjct: 167 GFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKP 226
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNG--------------------------- 153
+ TY TL+ G Y T +V ++ ++ NG
Sbjct: 227 EITTYGTLLQG-YATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLV 285
Query: 154 --------------EFGV-------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+G G V+ A F QM DE ++P + Y S+I G C
Sbjct: 286 FSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCT 345
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
N W A+ L++EM+D+G+ N + FN I+D CK G++ E+ +L DLM++IGV+P+
Sbjct: 346 CNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 405
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
Y+TL+DG+CL G+++ A +L SM S+G +YS LINGYCK ++ AL L+ EM
Sbjct: 406 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREME 465
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
S G+ PD++ YN + LF+ + A +L+ + + G + TY + GLCKN
Sbjct: 466 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTD 525
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
+A+ +F+ L ++ +L+ R +N +ID L
Sbjct: 526 DALRMFQNLCLMDLKLEARTFNIMIDAL 553
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 188/399 (47%), Gaps = 27/399 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG--LFPDLYTYNILIN 60
+FD +L R P V S+NIL L L L + G PD+ +Y+ +IN
Sbjct: 39 VFDELL--RRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVIN 96
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
F K G + + +L +PN VT+ S+I LC + +A + T + G P
Sbjct: 97 GFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMP 156
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
+ TYN++++G +G A+ ++M S + + PDV
Sbjct: 157 DCMTYNSIVHGFCSSGQPKEAIVFLKKMRS-----------------------DGVEPDV 193
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY S++ C EA+ + M +G++P + T+ ++ G + E LLDL
Sbjct: 194 VTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 253
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M++ G+ PN +V++ L+ + +V A +F M G +Y +I CK+
Sbjct: 254 MVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 313
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+E A+ + +M+ +G+ P ++YN+L L ++ ERA +L EM G+ +T + +
Sbjct: 314 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 373
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
ID CK ++E+ +LF + + + DI Y+ LIDG
Sbjct: 374 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDG 412
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 164/399 (41%), Gaps = 49/399 (12%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F+IL AK + + + +F ++ GL P+ TY +I CK GRV + +++
Sbjct: 266 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 325
Query: 80 RSCFTPNAVTFTSLIKGLCA-----------------------------------ESRIM 104
+P + + SLI GLC E R++
Sbjct: 326 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 385
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG------------- 151
E+ LF + G +P++ TY+TLI+G G A L M S
Sbjct: 386 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLI 445
Query: 152 NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
NG + D A LF +M+ ++PD++TY +++G AK L + + G
Sbjct: 446 NGYCKISRMKD-ALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGR 504
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
Q + T+N+I+ LCKN D+A R+ + + ++ A +N ++D GR + AK+
Sbjct: 505 QLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKD 564
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
LFV+ S G ++Y ++ +E L+ M G D + N + L
Sbjct: 565 LFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELL 624
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
+ ++ RA + + + T FID L Y
Sbjct: 625 QRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 663
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 3/171 (1%)
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG--CTHTVFSYS 289
++A + D +++ G+ P+ F YN L++G C R A EL M G C V SYS
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
+ING+ K +++ S Y EML + I P+VV YN++ L + V++A ++ M +
Sbjct: 93 TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GV D TY + + G C + EA+ + +R E D+ YN L+D L
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYL 203
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 139/400 (34%), Positives = 213/400 (53%), Gaps = 24/400 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F ML RP P + F + +AK +D V+ LF ++ + G+ DLY++ ILI+
Sbjct: 600 FGLFCEMLQSRP-IPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIH 658
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CFC+ R S +LG++++ F P+ VT SL+ G C +R EA +L + G EP
Sbjct: 659 CFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEP 718
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
NV YNT+INGL + ++ A E+F M+ + I D
Sbjct: 719 NVVIYNTVINGLCKNRD-----------------------LNNALEIFYGMEKKGIVADA 755
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY ++I G C + W +A LL +M+ + + PNV+ F ++D K G + EA L
Sbjct: 756 VTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKE 815
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
MI+ V PN YN+L++GFC+ GR+ AK +F M S GC V +Y+ LI G+CK+K
Sbjct: 816 MIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKR 875
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+E + L+ EM +G+ D YNTL + ++ A K+F+ M GV D TY
Sbjct: 876 VEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNI 935
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+D LC N I +A+ + L+ + ++DI YN +I G+
Sbjct: 936 LLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGM 975
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 135/398 (33%), Positives = 211/398 (53%), Gaps = 23/398 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ +P P V F L +A + Y+TV+ +++ G+ DLY++ ILI+CF
Sbjct: 52 LFLEMVQSQP-LPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCF 110
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ R+S +LG++++ + P+ VTF SL+ G C +RI +A +L + G EPNV
Sbjct: 111 CRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNV 170
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
YNTLI+ L + G +AL L EM K + D+VT
Sbjct: 171 VVYNTLIDCLCKNGDVNIALELLNEME----------------------KKGRLAADLVT 208
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++ G CY+ +W +A +L +M + + P+V TF ++D K G +DEA L M+
Sbjct: 209 YNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQML 268
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q + PN YN+L++G C+ GR+ AK+ F M S GC V +Y+ LING+CK++ +E
Sbjct: 269 QSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVE 328
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
+ L+ M +G+ D YNTL ++ ++ A +F M GV D T+ +
Sbjct: 329 DGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILL 388
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GLC N I A+ F +R + L I AYN +I GL
Sbjct: 389 HGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGL 426
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 129/275 (46%), Gaps = 14/275 (5%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N L L + + + + + + PD++T+ LI+ F K G + + ++
Sbjct: 208 TYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQM 267
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
L+S PN VT+ SLI GLC R+ A F + GC PNV TYNTLING ++
Sbjct: 268 LQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRV 327
Query: 139 IVALNLFEEMASGNGEFG--------VEGF-----VDKAKELFLQMKDENINPDVVTYTS 185
+ LF+ M G G + G+ + AK++F M + PD++T+
Sbjct: 328 EDGMKLFQRMYR-EGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCI 386
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
++ G C + A +M +V +N+++ LCK K++EA L + G
Sbjct: 387 LLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEG 446
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
V+P+A Y ++ G C G A ELF M+ G
Sbjct: 447 VKPDARTYTIMILGLCKNGPRREADELFRRMKEDG 481
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 111/466 (23%), Positives = 190/466 (40%), Gaps = 89/466 (19%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS----- 69
P V ++N L K++ + + LF+R+ GL D +TYN LI+ +C++G++
Sbjct: 309 PNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDI 368
Query: 70 --------------------HGFVVLGRILRSCFTPN----------AVTFTSLIKGLCA 99
HG V G I + N V + +I GLC
Sbjct: 369 FSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCK 428
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------- 152
++ EA LF +L V G +P+ TY +I GL + G A LF M
Sbjct: 429 ADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQAED 488
Query: 153 ---GEFGVEGFVD---------------KAKELFLQMKDENINPDVV-----TYTSVIRG 189
GE G V ++ +L+ D + +V +S ++G
Sbjct: 489 GHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLVGLIPIASSSSVKG 548
Query: 190 FCYANDWNEAKCLLIEMMDQGVQPNVVTFN-----------VIMDELCKNG----KMDEA 234
F + + ++++G P +F+ E ++ K D+A
Sbjct: 549 FVRRH---------LLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDDA 599
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
L M+Q P+ + ++ + + LF ME++G +H ++S++ILI+
Sbjct: 600 FGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHC 659
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
+C+ AL+L G+M+ G +P +V +L + ++ + A L D M G+ +
Sbjct: 660 FCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPN 719
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Y T I+GLCKN + A+E+F + D YN LI GL
Sbjct: 720 VVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGL 765
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 178/424 (41%), Gaps = 46/424 (10%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ ++NI+ L K + LF RL G+ PD TY I+I CK G +
Sbjct: 416 IVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFR 475
Query: 77 RI-------------LRSCFTPNAVTFTSLIKGLCAESR--IMEAAALF-----TKL--R 114
R+ L T N V+ ++I +C + R IME+ L+ T L
Sbjct: 476 RMKEDGIICQAEDGHLGEHGTNNQVSLGTII--ICPKRRRSIMESGDLYYYYSDTTLWSS 533
Query: 115 VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG-------------------EF 155
+ G P ++ + G R ++ E S +G E
Sbjct: 534 LVGLIP--IASSSSVKGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRSEL 591
Query: 156 GVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNV 215
F D A LF +M P +V +T V+ N ++ L +M + G+ ++
Sbjct: 592 HCIKF-DDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDL 650
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
+F +++ C+ + A LL M+++G +P+ +L++GFC R A L S
Sbjct: 651 YSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDS 710
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
M +G V Y+ +ING CKN+++ AL ++ M KGI D V YNTL L +
Sbjct: 711 MAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGR 770
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
A +L +M + + + + ID K ++EA L++ + +I YN
Sbjct: 771 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNS 830
Query: 396 LIDG 399
LI+G
Sbjct: 831 LING 834
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 114/252 (45%), Gaps = 14/252 (5%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P V +F L K + D L+K++ + + P+ TYN LIN C GR
Sbjct: 232 MTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGR 291
Query: 68 VSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ H + + CF PN VT+ +LI G C R+ + LF ++ G + FTYN
Sbjct: 292 LYHAKKTFDLMASKGCF-PNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYN 350
Query: 127 TLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDE 174
TLI+G + G VA ++F M S V G + A F M+
Sbjct: 351 TLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSG 410
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
+V Y +I G C A+ EA L + +GV+P+ T+ +++ LCKNG EA
Sbjct: 411 EKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREA 470
Query: 235 SRLLDLMIQIGV 246
L M + G+
Sbjct: 471 DELFRRMKEDGI 482
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 122/274 (44%), Gaps = 36/274 (13%)
Query: 162 DKAKELFLQMKDENINPDVV-----------------------------------TYTSV 186
+ A +LFL+M P VV ++T +
Sbjct: 47 EDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTIL 106
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I FC + + A +L +MM G P++VTF ++ C ++ +A L+ M++ G
Sbjct: 107 IHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGY 166
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG-CTHTVFSYSILINGYCKNKEIEGAL 305
PN VYNTL+D C G VN A EL ME G + +Y+ L+ G C + E A
Sbjct: 167 EPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAA 226
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
+ +M + I PDV + L + ++ A +L+ +M + + +T TY + I+GL
Sbjct: 227 RILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGL 286
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
C + + A + F + C ++ YN LI+G
Sbjct: 287 CMHGRLYHAKKTFDLMASKGCFPNVVTYNTLING 320
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 1/212 (0%)
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
GF ++ + +A L +EM+ P+VV F ++ + + + M G+
Sbjct: 39 GFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISH 98
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
+ + + L+ FC R++ A + M +G ++ ++ L++G+C I A SL
Sbjct: 99 DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLV 158
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG-VAADTWTYRTFIDGLCK 367
M+ G +P+VV+YNTL L + V A +L +EM++ G +AAD TY T + GLC
Sbjct: 159 ASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCY 218
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ +A + R + + D+ + LID
Sbjct: 219 SGEWRQAARILRDMTKRRINPDVFTFTALIDA 250
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + ++NIL CL N + L + + L + D+ TYNI+I C+ +V +
Sbjct: 927 PPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWC 986
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ + R +A+ + ++I GLC EA L T+++ G P+ Y+ + Y
Sbjct: 987 LFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLRDHY 1046
Query: 134 RT 135
+
Sbjct: 1047 TS 1048
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 65/171 (38%), Gaps = 35/171 (20%)
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+ ++A L M+Q P+ + L+ R ME G +H ++S++
Sbjct: 45 RFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFT 104
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
ILI+ +C+ + ALS+ G+M+ G P +V + +L +++ AF L M +
Sbjct: 105 ILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKS 164
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G E ++ YN LID L
Sbjct: 165 GY-----------------------------------EPNVVVYNTLIDCL 180
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 145/417 (34%), Positives = 225/417 (53%), Gaps = 44/417 (10%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ +L+ + PP+ F + G L K Y T +SL +++ G+ +L T NILINCF
Sbjct: 47 FNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFS 106
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAES----------RIMEA-AALFTK 112
++G+ F V IL+ + PN +T T+LIKGLC + ++ +A AAL
Sbjct: 107 QLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLL 166
Query: 113 LRVFG--CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQ 170
RV G +PNV YNT+I+ + + A +L+ EM S
Sbjct: 167 RRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVS-------------------- 206
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
E I+PDVVTY+++I GF +A L +M+ + ++P+V TFN+++D CK+GK
Sbjct: 207 ---EGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGK 263
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
M E + +M++ G++PN Y +LMDG+CL +VN+A +F +M G SY+I
Sbjct: 264 MKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNI 323
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+ING+CK K+++ A++L+ +M K I P+VV Y +L L + ++ A KL DEM G
Sbjct: 324 MINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRG 383
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVEL--------FRTLRILKCELDIRAYNCLIDG 399
V D TY + +D LCKN + +A+ L F L + LD+ AY +I G
Sbjct: 384 VPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQG 440
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 174/353 (49%), Gaps = 20/353 (5%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S+ L L K L L +R++ + P++ YN +I+ CK+ V+ F + +
Sbjct: 145 SYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 204
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ +P+ VT+++LI G ++ +A LF K+ + +P+V+T+N L++G + G
Sbjct: 205 VSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKM 264
Query: 139 IVALNLFEEMASGNGEFGV-------EGF-----VDKAKELFLQMKDENINPDVVTYTSV 186
+F M + V +G+ V+KA +F M +NPD +Y +
Sbjct: 265 KEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIM 324
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I GFC +EA L +M + + PNVVT+ ++D LCK+GK+ A +L+D M GV
Sbjct: 325 INGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGV 384
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM--------GCTHTVFSYSILINGYCKN 298
P+ Y++++D C +V++A L ++ G V++Y+++I G+C
Sbjct: 385 PPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVK 444
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
AL+L +M G PD Y + + LF+ + + A KL EM G+
Sbjct: 445 GLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 497
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 132/301 (43%), Gaps = 56/301 (18%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F ++ M++ SP V ++ G K D + LF ++ + PD+YT+NIL++
Sbjct: 198 FDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAI-DLFNKMILENIKPDVYTFNILVD 256
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL--------------------------- 93
FCK G++ G V +++ PN VT+ SL
Sbjct: 257 GFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNP 316
Query: 94 --------IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
I G C ++ EA LF K+ PNV TY +LI+GL ++G AL L
Sbjct: 317 DTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLV 376
Query: 146 EEMASGNGEFGVEGF------------VDKAKELFLQMKDE--------NINPDVVTYTS 185
+EM + + VDKA L ++KD+ N DV YT
Sbjct: 377 DEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTV 436
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I+GFC +NEA LL +M D G P+ T+ +I+ L K + D A +LL MI G
Sbjct: 437 MIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 496
Query: 246 V 246
+
Sbjct: 497 L 497
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/434 (30%), Positives = 221/434 (50%), Gaps = 49/434 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + L K + D + + + G+ PD TYN +++ +C G+
Sbjct: 229 PDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGF 288
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+ VT++ L+ LC R MEA +F + G +P + TY TL+ G Y
Sbjct: 289 LKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQG-YA 347
Query: 135 TGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDVV 181
T +V ++ ++ NG + +G VD+A +F +M+ + +NP+ V
Sbjct: 348 TKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAV 407
Query: 182 TY-----------------------------------TSVIRGFCYANDWNEAKCLLIEM 206
TY S+I G C N W A+ L++EM
Sbjct: 408 TYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM 467
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+D+G+ N + FN I+D CK G++ E+ +L +LM++IGV+PN YNTL++G+CL G++
Sbjct: 468 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKM 527
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ A +L M S+G +YS LINGYCK +E AL L+ EM S G+ PD++ YN +
Sbjct: 528 DEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNII 587
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
LF+ + A +L+ + G + TY + GLCKN +A+++F+ L ++
Sbjct: 588 LQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDL 647
Query: 387 ELDIRAYNCLIDGL 400
+L+ R +N +ID L
Sbjct: 648 KLEARTFNIMIDAL 661
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 141/486 (29%), Positives = 223/486 (45%), Gaps = 91/486 (18%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG---LFPDLYTYNILI 59
+FD +L R + N +A++ V S + R+ G + PDL TY ILI
Sbjct: 37 VFDELLR-RGRGASIYGLNRALADVARDSPAAAV-SRYNRMARAGADEVTPDLCTYGILI 94
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGC 118
C C+ GR+ GF LG +++ F +A+ FT L+KGLCA+ R +A + ++ GC
Sbjct: 95 GCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGC 154
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG---------------EFGVEGFVDK 163
PNVF+YN L+ GL + AL L MA G F EG DK
Sbjct: 155 IPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDK 214
Query: 164 AKELFLQMKDENINPDVVTYTSVI-----------------------------------R 188
A + +M D I PDVVTY S+I
Sbjct: 215 AYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 274
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR------------ 236
G+C + EA L +M GV+P+VVT++++MD LCKNG+ EA +
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334
Query: 237 -----------------------LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
LLDLM++ G+ P+ +V++ L+ + G+V++A +F
Sbjct: 335 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVF 394
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
M G +Y +I CK+ +E A+ + +M+ +G+ P ++YN+L L
Sbjct: 395 SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTC 454
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
++ ERA +L EM G+ +T + + ID CK ++E+ +LF + + + ++ Y
Sbjct: 455 NKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITY 514
Query: 394 NCLIDG 399
N LI+G
Sbjct: 515 NTLING 520
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 166/404 (41%), Gaps = 49/404 (12%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P F+IL AK D + +F ++ GL P+ TY +I CK GRV +
Sbjct: 369 PDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLY 428
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCA----------------------------------- 99
+++ +P + + SLI GLC
Sbjct: 429 FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 488
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG-------- 151
E R++E+ LF + G +PNV TYNTLING G A+ L M S
Sbjct: 489 EGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVT 548
Query: 152 -----NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
NG + D A LF +M+ ++PD++TY +++G AK L + +
Sbjct: 549 YSTLINGYCKISRMED-ALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+ G Q + T+N+I+ LCKN D+A ++ + + ++ A +N ++D GR
Sbjct: 608 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRN 667
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ AK+LFV+ S G ++Y ++ +E L+ M G D + N +
Sbjct: 668 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFI 727
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
L + ++ RA + + + T FID L Y
Sbjct: 728 VRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 771
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/417 (33%), Positives = 222/417 (53%), Gaps = 28/417 (6%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ MR P + SF IL C LS F ++ G P L T++ L++ C R
Sbjct: 102 MEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDR 161
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
VS +I + PN + FT+L+ GLC E R++EA AL ++ G +PN TY T
Sbjct: 162 VSEALHFFHQICK----PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGT 217
Query: 128 LINGLYRTGHTIVALNLFEEMASGN-------------GEFGVEGFVDKAKELFLQMKDE 174
+++G+ + G T+ ALNL +M + +G A+ LF +M+++
Sbjct: 218 IVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEK 277
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
I+P++ TY +I GFC + W+EA+ LL EM ++ + P+VVTF+V+++ L K GK EA
Sbjct: 278 GISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEA 337
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
L + M+ G+ PN YN+++DGF R++ A+ +F M + GC+ V ++SILI+G
Sbjct: 338 EELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDG 397
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
YC K ++ + L EM +G+ + + Y TL ++ + A L EM GV +
Sbjct: 398 YCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPN 457
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL-----------DIRAYNCLIDGL 400
T T +DGLC N + +A+E+F+ ++ K +L D++ YN LI GL
Sbjct: 458 VVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGL 514
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/390 (31%), Positives = 192/390 (49%), Gaps = 23/390 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L K+ +LF + G+ P+L+TYN +IN FC GR S +
Sbjct: 246 PNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRL 305
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + +P+ VTF+ LI L E + EA L+ ++ G PN TYN++I+G +
Sbjct: 306 LREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSK 365
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
A +F MA+ V F VD +L +M + + +T
Sbjct: 366 QNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTIT 425
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT++I GFC + N A LL EM+ GV PNVVT N ++D LC NGK+ +A + +M
Sbjct: 426 YTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQ 485
Query: 243 QI-----------GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
+ V P+ YN L+ G G+ + A+EL+ M G +Y+ +
Sbjct: 486 KSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSV 545
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I+G CK ++ A ++ M SKG PDVV + TL ++ +V ++F EM R G+
Sbjct: 546 IDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGI 605
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
A+ TYRT I G C+ I A+++F+ +
Sbjct: 606 VANAITYRTLIHGFCQVGNINGALDIFQEM 635
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 164/327 (50%), Gaps = 12/327 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N + +K D +F + + G PD+ T++ILI+ +C RV G +
Sbjct: 351 PNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKL 410
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + R N +T+T+LI G C + A L ++ G PNV T NTL++GL
Sbjct: 411 LHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCN 470
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G AL +F+ M + A F ++ PDV TY +I G
Sbjct: 471 NGKLKDALEMFKVMQKSKMDL-------DASHPF-----NDVEPDVQTYNILICGLINEG 518
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
++EA+ L EM +G+ P+ +T+N ++D LCK ++DEA+++ D M G P+ +
Sbjct: 519 KFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFT 578
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL++G+C GRV E+F M G +Y LI+G+C+ I GAL ++ EM+S
Sbjct: 579 TLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISS 638
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFK 341
G+ PD + + L+ +++RA +
Sbjct: 639 GVYPDTITIRNMLTGLWSKEELKRAVQ 665
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 144/312 (46%), Gaps = 34/312 (10%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
Y++ + P V +F+IL K D + L ++ GL + TY LI+ FC++
Sbjct: 377 YLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQL 436
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF--------- 116
G ++ +L ++ S PN VT +L+ GLC ++ +A +F ++
Sbjct: 437 GNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHP 496
Query: 117 --GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDE 174
EP+V TYN LI GL EG +A+EL+ +M
Sbjct: 497 FNDVEPDVQTYNILICGLIN-----------------------EGKFSEAEELYEEMPHR 533
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
+ PD +TY SVI G C + +EA + M +G P+VVTF +++ CK G++ +
Sbjct: 534 GLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDG 593
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+ M + G+ NA Y TL+ GFC G +N A ++F M S G + ++ G
Sbjct: 594 LEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTG 653
Query: 295 YCKNKEIEGALS 306
+E++ A+
Sbjct: 654 LWSKEELKRAVQ 665
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 99/235 (42%), Gaps = 34/235 (14%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGL-----------FPDLYTYNILINCFC 63
P V + N L L N L +FK + + + PD+ TYNILI
Sbjct: 456 PNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLI 515
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
G+ S + + P+ +T+ S+I GLC +SR+ EA +F + G P+V
Sbjct: 516 NEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVV 575
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
T+ TLING + G V E+F +M I + +TY
Sbjct: 576 TFTTLINGYCKVGR-----------------------VGDGLEVFCEMGRRGIVANAITY 612
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
++I GFC + N A + EM+ GV P+ +T ++ L ++ A + L
Sbjct: 613 RTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 219/405 (54%), Gaps = 14/405 (3%)
Query: 10 MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS 69
MR PP V S+ + L K D + ++ G P++ TY L++ FC++G +
Sbjct: 107 MRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLD 166
Query: 70 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPNVFTYNTL 128
++ ++ + PNA+T+ +++ GLC+ ++ A LF ++ G C P+VFTY+T+
Sbjct: 167 GAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTI 226
Query: 129 INGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENI 176
++ L ++G A L E M S V G +D+A L +M
Sbjct: 227 VDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGC 286
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
+P++VTY ++I G C +EA LL EM+D G QPNVVT+ V++D CK GK ++A
Sbjct: 287 SPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIG 346
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
L+++M++ G PN F YN+L+D FC V RA +L SM GC V SY+ +I G C
Sbjct: 347 LVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLC 406
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K ++ + L +MLS PD+V +NT+ + + ++V+ A++LF+ +Q G +
Sbjct: 407 KATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLV 466
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTL-RILKCELDIRAYNCLIDGL 400
TY + + GLCK+ +A L R + R C DI YN +IDGL
Sbjct: 467 TYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGL 511
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 130/405 (32%), Positives = 218/405 (53%), Gaps = 17/405 (4%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
+ PP ++N + L+K+ D + L + + G P++++YN +++ FCK RV +
Sbjct: 38 KTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVEN 97
Query: 71 GFVVLGR-ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
+L + ++R C P+ V++T++I GLC ++ EA + K+ GC+PNV TY TL+
Sbjct: 98 ALWLLEQMVMRGC-PPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLV 156
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDE-NI 176
+G R G A+ L +M + +D A +LF +M++ +
Sbjct: 157 DGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSC 216
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIE-MMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
PDV TY++++ + ++A C L+E M+ +G PNVVT++ ++ LCK GK+DEA+
Sbjct: 217 PPDVFTYSTIVDSLVKSGKVDDA-CRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEAT 275
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
LL M + G PN YNT++DG C GR++ A L M GC V +Y++L++ +
Sbjct: 276 ALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAF 335
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
CK + E A+ L M+ KG P++ YN+L + + +VERA +L M + G +
Sbjct: 336 CKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNV 395
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+Y T I GLCK + + E V L + C DI +N +ID +
Sbjct: 396 VSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAM 440
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 210/411 (51%), Gaps = 13/411 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M PP V +++ + L K+ D L + + S G P++ TY+ L++
Sbjct: 206 LFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGL 265
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G++ +L R+ RS +PN VT+ ++I G C RI EA L ++ GC+PNV
Sbjct: 266 CKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNV 325
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
TY L++ + G A+ L E M F + V++A +L
Sbjct: 326 VTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSS 385
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + P+VV+Y +VI G C A +E LL +M+ P++VTFN I+D +CK +
Sbjct: 386 MIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYR 445
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMGCTHTVFSYS 289
+D A L +L+ + G PN YN+L+ G C + R ++A+ L M GC+ + +Y+
Sbjct: 446 VDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYN 505
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
+I+G CK+K ++ A L+ +MLS G+ PD V Y+ + L + ++ A + + M ++
Sbjct: 506 TVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKN 565
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G TY T IDG CK + +A+E+ + L D+ ++ ID L
Sbjct: 566 GFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWL 616
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 199/399 (49%), Gaps = 13/399 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N + K D L + + G P++ TY +L++ FCK G+ +
Sbjct: 288 PNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGL 347
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ ++ + PN T+ SL+ C + + A L + + GC PNV +YNT+I GL +
Sbjct: 348 VEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCK 407
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
+ L E+M S N + F VD A ELF +++ P++VT
Sbjct: 408 ATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVT 467
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMM-DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y S++ G C + +++A+ LL EM QG P+++T+N ++D LCK+ ++D A +L M
Sbjct: 468 YNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQM 527
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G+ P+ Y+ ++ C ++ A + M G +Y LI+G+CK +
Sbjct: 528 LSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNL 587
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ AL + +LSKG PDVV ++ L + ++ +A +L + M R G+ DT TY T
Sbjct: 588 DKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTL 647
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ G C S +AV+LF +R CE D Y L+ L
Sbjct: 648 LKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHL 686
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 195/381 (51%), Gaps = 14/381 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ +L K + + L + + G P+L+TYN L++ FCK V +
Sbjct: 323 PNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQL 382
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ PN V++ ++I GLC +++ E L ++ C P++ T+NT+I+ + +
Sbjct: 383 LSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCK 442
Query: 135 TGHTIVA---LNLFEEMASGNGEFGVEGFV---------DKAKELFLQM-KDENINPDVV 181
T +A NL +E V D+A+ L +M + + +PD++
Sbjct: 443 TYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDII 502
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY +VI G C + + A L ++M+ G+ P+ VT+++++ LCK MDEA+ +L+LM
Sbjct: 503 TYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELM 562
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++ G P A Y TL+DGFC TG +++A E+ + S G V ++SI I+ K +
Sbjct: 563 LKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRL 622
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A L ML G+ PD V YNTL + + E A LF+ M++ G D TY T
Sbjct: 623 RQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTL 682
Query: 362 IDGLC-KNSYIVEAVELFRTL 381
+ L K SY E+ +++
Sbjct: 683 VGHLVDKKSYKDLLAEVSKSM 703
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 164/321 (51%), Gaps = 25/321 (7%)
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
R +A S+++GLC + +A F ++ C P+ TYNT+INGL ++
Sbjct: 3 RKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDRLD 61
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
A+ L EEM D P+V +Y +V+ GFC AN A
Sbjct: 62 DAIRLLEEMV-----------------------DNGFAPNVFSYNTVLHGFCKANRVENA 98
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
LL +M+ +G P+VV++ +++ LCK ++DEA R++D MIQ G +PN Y TL+DG
Sbjct: 99 LWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDG 158
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG-IKP 318
FC G ++ A EL M G +Y+ +++G C ++++ AL L+ EM G P
Sbjct: 159 FCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPP 218
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
DV Y+T+ L + +V+ A +L + M G + + TY + + GLCK + EA L
Sbjct: 219 DVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALL 278
Query: 379 RTLRILKCELDIRAYNCLIDG 399
+ + C +I YN +IDG
Sbjct: 279 QRMTRSGCSPNIVTYNTIIDG 299
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 157/317 (49%), Gaps = 14/317 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+N + L K + L +++ S PD+ T+N +I+ CK RV + +
Sbjct: 393 PNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYEL 452
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPNVFTYNTLINGLY 133
I S TPN VT+ SL+ GLC R +A L ++ R GC P++ TYNT+I+GL
Sbjct: 453 FNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLC 512
Query: 134 RTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
++ A LF +M S F+D+A + M +P +
Sbjct: 513 KSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAI 572
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY ++I GFC + ++A +L ++ +G P+VVTF++ +D L K G++ +A LL+ M
Sbjct: 573 TYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETM 632
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++ G+ P+ YNTL+ GFC R A +LF M GC +Y+ L+ K
Sbjct: 633 LRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSY 692
Query: 302 EGALS-LYGEMLSKGIK 317
+ L+ + M+ G K
Sbjct: 693 KDLLAEVSKSMVDTGFK 709
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
H SIL G C + A+ + EM SK PD V YNT+ L + +++ A +
Sbjct: 8 AHAGVHKSIL-RGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDRLDDAIR 65
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
L +EM +G A + ++Y T + G CK + + A+ L + + C D+ +Y +I+GL
Sbjct: 66 LLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGL 124
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
+L + S P V +F+I L+K L + + GL PD TYN L+ FC
Sbjct: 596 LLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDAS 655
Query: 67 RVSHGFVVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTK 112
R V L ++R C P+ T+T+L+ L + + A +K
Sbjct: 656 RTEDA-VDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSK 701
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 133/434 (30%), Positives = 221/434 (50%), Gaps = 49/434 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + L K + D + + + G+ PD TYN +++ +C G+
Sbjct: 229 PDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGF 288
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+ VT++ L+ LC R MEA +F + G +P + TY TL+ G Y
Sbjct: 289 LKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQG-YA 347
Query: 135 TGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDVV 181
T +V ++ ++ NG + +G VD+A +F +M+ + +NP+ V
Sbjct: 348 TKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAV 407
Query: 182 TY-----------------------------------TSVIRGFCYANDWNEAKCLLIEM 206
TY S+I G C N W A+ L++EM
Sbjct: 408 TYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM 467
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+D+G+ N + FN I+D CK G++ E+ +L +LM++IGV+PN YNTL++G+CL G++
Sbjct: 468 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKM 527
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ A +L M S+G +YS LINGYCK +E AL L+ EM S G+ PD++ YN +
Sbjct: 528 DEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNII 587
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
LF+ + A +L+ + G + TY + GLCKN +A+++F+ L ++
Sbjct: 588 LQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDL 647
Query: 387 ELDIRAYNCLIDGL 400
+L+ R +N +ID L
Sbjct: 648 KLEARTFNIMIDAL 661
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 141/486 (29%), Positives = 223/486 (45%), Gaps = 91/486 (18%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG---LFPDLYTYNILI 59
+FD +L R + N +A++ V S + R+ G + PDL TY ILI
Sbjct: 37 VFDELLR-RGRGASIYGLNRALADVARDSPAAAV-SRYNRMARAGADEVTPDLCTYGILI 94
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGC 118
C C+ GR+ GF LG +++ F +A+ FT L+KGLCA+ R +A + ++ GC
Sbjct: 95 GCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGC 154
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG---------------EFGVEGFVDK 163
PNVF+YN L+ GL + AL L MA G F EG DK
Sbjct: 155 IPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDK 214
Query: 164 AKELFLQMKDENINPDVVTYTSVI-----------------------------------R 188
A + +M D I PDVVTY S+I
Sbjct: 215 AYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 274
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR------------ 236
G+C + EA L +M GV+P+VVT++++MD LCKNG+ EA +
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334
Query: 237 -----------------------LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
LLDLM++ G+ P+ +V++ L+ + G+V++A +F
Sbjct: 335 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVF 394
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
M G +Y +I CK+ +E A+ + +M+ +G+ P ++YN+L L
Sbjct: 395 SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTC 454
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
++ ERA +L EM G+ +T + + ID CK ++E+ +LF + + + ++ Y
Sbjct: 455 NKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITY 514
Query: 394 NCLIDG 399
N LI+G
Sbjct: 515 NTLING 520
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 165/404 (40%), Gaps = 49/404 (12%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P F+IL A D + +F ++ GL P+ TY +I CK GRV +
Sbjct: 369 PDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLY 428
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCA----------------------------------- 99
+++ +P + + SLI GLC
Sbjct: 429 FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 488
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG-------- 151
E R++E+ LF + G +PNV TYNTLING G A+ L M S
Sbjct: 489 EGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVT 548
Query: 152 -----NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
NG + D A LF +M+ ++PD++TY +++G AK L + +
Sbjct: 549 YSTLINGYCKISRMED-ALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+ G Q + T+N+I+ LCKN D+A ++ + + ++ A +N ++D GR
Sbjct: 608 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRN 667
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ AK+LFV+ S G ++Y ++ +E L+ M G D + N +
Sbjct: 668 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFI 727
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
L + ++ RA + + + T FID L Y
Sbjct: 728 VRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 771
>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 143/391 (36%), Positives = 209/391 (53%), Gaps = 31/391 (7%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
ML MRP PP + F+ L + + KHY TVLSL+K+++S G+ + YT NILIN FC +
Sbjct: 1 MLRMRP-PPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLN 59
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
R+ F VLG IL+ + P+ TFT+LI+GLC E +I EA LF K+ G +P+V TY
Sbjct: 60 RLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYG 119
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
TLINGL + AL+LF +M + + I+P+ TY+S+
Sbjct: 120 TLINGLCKDRQLTEALSLFSDMLA-----------------------KGISPNNFTYSSL 156
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK---MDEASRLLDLMIQ 243
I G C W EA L M+ + + P+ +TFN ++D LCK G MD+A L + M Q
Sbjct: 157 IHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQ 216
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G+ P+ YNTL+ G C GR+ A LF M G + +Y IL + CKN +
Sbjct: 217 QGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAE 276
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A+ L + + PD+ IY+ + + ++E A LF ++ G+ D TY I+
Sbjct: 277 AMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMIN 336
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
GLC+ + EA +LF + E DI +Y+
Sbjct: 337 GLCQQGLLAEASKLFGEMD----ENDIESYS 363
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 91/188 (48%)
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
P++V F+ ++ + + L M G+ N + N L++ FC R+ A +
Sbjct: 8 PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
+ +G + +++ LI G C +I AL L+ +M +G +PDV+ Y TL L +
Sbjct: 68 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
Q+ A LF +M G++ + +TY + I GLC + EA+ LF + K D
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187
Query: 393 YNCLIDGL 400
+N L+D L
Sbjct: 188 FNTLVDAL 195
>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 140/411 (34%), Positives = 218/411 (53%), Gaps = 14/411 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINC 61
+F M M+P P V F +L G + + KHY T +SL K + +S G+ D T NI+INC
Sbjct: 63 LFQGMARMKP-LPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADTITLNIVINC 121
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
C++ V+ GF VLG + + P +T T+LI GLC + + +A L + +
Sbjct: 122 LCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKMWYPLD 181
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFL 169
V+TY LINGL +TG T+ A+ +M N + V +G V +A L
Sbjct: 182 VYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCS 241
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M + + P++VTY +I+G C W EA LL EMM G++P++ N+++D CK G
Sbjct: 242 EMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEG 301
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+ +A ++ MI G P+ F YN+L+ +CL ++N A +F M S G + ++
Sbjct: 302 KVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFT 361
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
LI+G+CK+K I A+ L EM G PDV + TL + + A +LF M +
Sbjct: 362 SLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKY 421
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G + T +DGLCK + + EAV L + + +L+I Y+ L+DG+
Sbjct: 422 GQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGM 472
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 186/398 (46%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + L L + + L + D+YTY +LIN CK G
Sbjct: 145 PTVMTLTTLINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGW 204
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ + PN V +++++ GLC + + EA L +++ G PN+ TY LI GL
Sbjct: 205 LRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCN 264
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G A +L +EM F EG V +AK + M PDV T
Sbjct: 265 FGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFT 324
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S+I +C N NEA + M+ +G P++V F ++ CK+ +++A LL+ M
Sbjct: 325 YNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMS 384
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
++G P+ + TL+ GFC GR AKELF++M G + + +++++G CK +
Sbjct: 385 KMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLS 444
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+SL M + ++VIY+ L + ++ A++LF + G+ + + Y I
Sbjct: 445 EAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMI 504
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GLCK + +A +L + C + YN + GL
Sbjct: 505 KGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGL 542
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 173/383 (45%), Gaps = 15/383 (3%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V ++ + L K+ L+L +N G+ P+L TY LI C GR
Sbjct: 211 RNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKE 270
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+L +++ P+ L+ C E ++M+A ++ + + G P+VFTYN+LI+
Sbjct: 271 AGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIH 330
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFG--------VEGF-----VDKAKELFLQMKDENIN 177
A+ +F M S G + G+ ++KA L +M
Sbjct: 331 IYCLQNKMNEAMRVFHLMVS-RGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFV 389
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
PDV T+T++I GFC A AK L + M G PN+ T VI+D LCK + EA L
Sbjct: 390 PDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSL 449
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
M + + N +Y+ L+DG C G++N A ELF S+ G V+ Y+I+I G CK
Sbjct: 450 AKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCK 509
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
++ A L M G P+ YN L ++ R+ K M+ G + D T
Sbjct: 510 QGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAAT 569
Query: 358 YRTFIDGLCKNSYIVEAVE-LFR 379
I+ L N + E LFR
Sbjct: 570 TEFIINYLSTNEGDTKIREFLFR 592
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 137/313 (43%), Gaps = 21/313 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M+ M P + NIL K S+ + TG PD++TYN LI+ +
Sbjct: 274 LLDEMMKMGMRPD-LQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIY 332
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +++ V ++ P+ V FTSLI G C + I +A L ++ G P+V
Sbjct: 333 CLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDV 392
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV----------------EGFVDKAKE 166
T+ TLI G + G + A LF M ++G E + +A
Sbjct: 393 ATWTTLIGGFCQAGRPLAAKELFLNMH----KYGQVPNLQTCAVILDGLCKENLLSEAVS 448
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
L M+ N++ ++V Y+ ++ G C A N A L + +G+Q NV + +++ LC
Sbjct: 449 LAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLC 508
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
K G +D+A LL M + G PN YN + G + R+ + M G +
Sbjct: 509 KQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAA 568
Query: 287 SYSILINGYCKNK 299
+ +IN N+
Sbjct: 569 TTEFIINYLSTNE 581
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 141/398 (35%), Positives = 207/398 (52%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N L CL K +D L L + G PD+ TYN LI+ K GR+S F +
Sbjct: 77 PNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTL 136
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ P+ T+ SLI GL R +A L ++ GC P+V TY++LI GL +
Sbjct: 137 FAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGK 196
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
G T+ A LF+EM + G G VD A EL +MK+ + P VVT
Sbjct: 197 DGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVT 256
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I GF D EA LL EM G +P+VVT++ ++ L K ++DEA ++L M
Sbjct: 257 YNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKME 316
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G P+ YNTL++G G +N A LF M+S GC V +YS LI K +E
Sbjct: 317 KEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVE 376
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ EM S GI+PD+ Y ++ VL + QV+ A +LF EM+ G++ D TY F+
Sbjct: 377 SACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFL 436
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ L + EA ++F ++ D+ Y+ L+ GL
Sbjct: 437 NSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGL 474
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 129/398 (32%), Positives = 189/398 (47%), Gaps = 13/398 (3%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
PSP V ++N L LAK + LF+ L + PD+ +Y+ LIN + G+
Sbjct: 5 PSPN-VVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAA 63
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
V+ + PN T+ +L+ L + EA L ++R GC P+V TYN LI+
Sbjct: 64 LEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLIST 123
Query: 132 LYRTGHTIVALNLFEEMASGNG------------EFGVEGFVDKAKELFLQMKDENINPD 179
L + G A LF EM G G KA EL +M+ PD
Sbjct: 124 LGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPD 183
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
V+TY+S+I G + +A L EM +G +P+ +TF +MD L K G++D+A LLD
Sbjct: 184 VMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLD 243
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M + GV+P YN L+ GF G + A L M+ GC V +YS LI G K
Sbjct: 244 EMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKAS 303
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
+++ A + +M +G PD + YNTL L + + A +LFD M+ G D TY
Sbjct: 304 QLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYS 363
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
T I L K + + A LF + + + D+ Y +I
Sbjct: 364 TLITALGKAARVESACVLFEEMESVGIQPDLFTYCSII 401
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 183/400 (45%), Gaps = 24/400 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F M R P +F L L K D L L + G+ P + TYN LI
Sbjct: 204 FKLFQEM-KRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIA 262
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
F K+G + + +L + R+ P+ VT++ LI GL S++ EA + K+ GC P
Sbjct: 263 GFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPP 322
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
+ TYNTLINGL G G ++ A LF +MK + NPDV
Sbjct: 323 DTITYNTLINGL-----------------------GKAGLLNDAGRLFDRMKSKGCNPDV 359
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY+++I A A L EM G+QP++ T+ I+ L K G++D+A RL
Sbjct: 360 VTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSE 419
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M G+ P+ YN ++ GR A+++F M+ G V +Y L+ G K KE
Sbjct: 420 MRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKE 479
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
++ A L E++ +G D + ++ +L V+ A +L G+ +Y
Sbjct: 480 VDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNA 539
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
ID L K + EA L+ + DI +Y+ LI L
Sbjct: 540 LIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISAL 579
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 155/317 (48%), Gaps = 23/317 (7%)
Query: 84 TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALN 143
+PN VT+ SL+ L + EA LF +L+ P+V +Y+ LIN L R G AL
Sbjct: 6 SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAAL- 64
Query: 144 LFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
E+ +M+ + P++ TY +++ A ++EA LL
Sbjct: 65 ----------------------EVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLL 102
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
EM D G P+V T+N ++ L K G++ EA L M + G P+ F YN+L+ G
Sbjct: 103 AEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKV 162
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
GR +A EL ME GC V +YS LI G K+ E A L+ EM +G KPD + +
Sbjct: 163 GRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITF 222
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
L L + +V+ A +L DEM+ GV TY I G K +VEA L ++
Sbjct: 223 TALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKR 282
Query: 384 LKCELDIRAYNCLIDGL 400
C+ D+ Y+CLI GL
Sbjct: 283 NGCKPDVVTYSCLITGL 299
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 110/270 (40%), Gaps = 48/270 (17%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M + P V +++ L L K ++ LF+ + S G+ PDL+TY +I
Sbjct: 346 LFDRM-KSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVL 404
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K G+V + + +P+ +T+ + + L R EA +F ++ G P+V
Sbjct: 405 GKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDV 464
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFL- 169
TY+ L+ GL +T A L +E+ F F VD+A EL
Sbjct: 465 ATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQF 524
Query: 170 ----------------------------------QMKDENINPDVVTYTSVIRGFCYAND 195
+K++ PD+V+Y+S+I
Sbjct: 525 ANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQ 584
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
+ A LL EM +G++ + +++ ++ +L
Sbjct: 585 IDTAFELLEEMSKRGLKLSPRSYSNLVRKL 614
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%)
Query: 32 HYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 91
+ D L + NS GL+P +YN LI+ K GRVS F L + P+ V+++
Sbjct: 514 NVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYS 573
Query: 92 SLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
SLI L +I A L ++ G + + +Y+ L+ L G
Sbjct: 574 SLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQDWG 618
>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 139/411 (33%), Positives = 218/411 (53%), Gaps = 14/411 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINC 61
+F M +M+P P V F +L G + + KHY T +SL K + +S G+ D T NI+INC
Sbjct: 63 LFQGMASMKP-LPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLGIEADTITLNIVINC 121
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
C++ V+ GF VLG + + P +T T+LI GLC + + +A L + +
Sbjct: 122 LCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLD 181
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFL 169
V+TY LINGL +TG T+ A+ +M N + V +G V +A L
Sbjct: 182 VYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCS 241
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M + + P++VTY +I+G C W E LL EM+ G++ ++ T N+++D CK G
Sbjct: 242 EMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEG 301
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+ +A ++ MI G P+ F YN+L+ +CL ++N A +F M S GC + ++
Sbjct: 302 KVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFT 361
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
LI+G+CK+K I + L EM G PDVV + TL + + A +LF M +
Sbjct: 362 SLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKY 421
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G + T +DGLCK + + EAV L + +L+I Y+ L+DG+
Sbjct: 422 GQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGM 472
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 170/364 (46%), Gaps = 23/364 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++ L L + SL + G+ DL T NIL++ FCK G+V V
Sbjct: 250 PNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSV 309
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+G ++ + P+ T+ SLI C ++++ EA +F + GC P++ + +LI+G +
Sbjct: 310 IGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCK 369
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ ++L EEMA GFV PDVVT+T++I GFC A
Sbjct: 370 DKNINKVMHLLEEMAK-------MGFV----------------PDVVTWTTLIGGFCQAG 406
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
AK L + M G PN+ T VI+D LCK + EA L + M + + N +Y+
Sbjct: 407 RPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYS 466
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DG C G++N A ELF S+ G V++Y+I+I G CK ++ A L M
Sbjct: 467 ILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEEN 526
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G PD YN L ++ R+ K M+ G + D T I+ L N
Sbjct: 527 GCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEITINYLSTNEGDTRI 586
Query: 375 VELF 378
E F
Sbjct: 587 REFF 590
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 10/200 (5%)
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG-VRPNAFVYN-TLMDGFCL--- 262
D N F + M LCK+GK+ LDL + ++P V + TL+ G +
Sbjct: 31 DTDSHSNGTQFLISMRNLCKSGKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLK 90
Query: 263 --TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
T ++ K +F S+G + +I+IN C+ K + S+ G M G++P V
Sbjct: 91 HYTTAISLVKHIF---SSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTV 147
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
+ L L V +A L D M++ D +TY I+GLCK + AVE R
Sbjct: 148 MTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRK 207
Query: 381 LRILKCELDIRAYNCLIDGL 400
+ + ++ Y+ ++DGL
Sbjct: 208 MEERNWKPNVVVYSTIMDGL 227
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 137/403 (33%), Positives = 221/403 (54%), Gaps = 10/403 (2%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
ML + P+PP + FN + L K HY T +SLF++L G+ P + T IL+NC+C G
Sbjct: 1 MLQISPTPP-ILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTG 59
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
++ F +L +IL+ + PN++TFT+LIKG+C + EA + G + + +Y
Sbjct: 60 GITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYA 119
Query: 127 TLINGLYRTGHTIVALNLFEE--------MASGNGEFGVEG-FVDKAKELFLQMKDENIN 177
L+NGL + G T A+ + + M S + +G FV A L+ +M + I
Sbjct: 120 ILMNGLCKMGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIF 179
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P+V T++ ++ C +A LL MM +GV+PNVVT+ IMD C ++++A +
Sbjct: 180 PNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNI 239
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
++M+Q GV PN + YN +++G C RV+ A LF M V +Y+ILI+G CK
Sbjct: 240 FNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCK 299
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+I +L L EM S G D++ YN+L L + H +++A L E++ G+ + T
Sbjct: 300 LGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCT 359
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Y T IDGLCK+ + +A +F+ + + + YN +I+GL
Sbjct: 360 YTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGL 402
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 168/336 (50%), Gaps = 23/336 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++ + L K K L+ + + G+FP++YT++IL++ CK + +L
Sbjct: 147 VVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLA 206
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+++ PN VT+ +++ G C +++ +A +F + G EPNV+ YN +INGL +
Sbjct: 207 MMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKK 266
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
A+NLF+EM + INPDVVTY +I G C
Sbjct: 267 RVDEAMNLFKEMHW-----------------------KKINPDVVTYNILIDGLCKLGKI 303
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+ + L+ EM G +++T+N ++ LCKN +D+A L+ + G++PN Y TL
Sbjct: 304 STSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTL 363
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG C GR+ A +F + + G TV++Y+++ING CK + AL+L M
Sbjct: 364 IDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNAC 423
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
PD V Y T+ L E + + KL M G++
Sbjct: 424 IPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGLS 459
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 50/103 (48%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P VC++ L L K+ + +F+ + + G ++TYN++IN CK G +
Sbjct: 355 PNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALAL 414
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 117
L R+ + P+AV++ ++I L + ++ L + V G
Sbjct: 415 LSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRG 457
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 144/410 (35%), Positives = 220/410 (53%), Gaps = 28/410 (6%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNK-HYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
F+ M +R +P + FN + L K K HY TVLSL ++ S G+ PDL+T +ILINC+
Sbjct: 54 FNRMRQIRQTPS-IVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCY 112
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +G+++ F V +IL+ GLC ++ EA + G N
Sbjct: 113 CHLGQMTFAFSVFAKILKM--------------GLCLNGKVNEALLFHDHVLALGFHLNH 158
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
TY LINGL + G T AL + ++ V + V A L+ +
Sbjct: 159 VTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSE 218
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + I P VVT++S+I GFC + +A L EM+ + + P+ TFN+++D LCK GK
Sbjct: 219 MIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGK 278
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ EA ++ +M++ GV P YNTLMDG+CL V +AK + + M SY+I
Sbjct: 279 IKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNI 338
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+ING+CK K ++ AL L+ EM +GI P V YN+L L + ++ A++L DEM +
Sbjct: 339 MINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNC 398
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ AD TY + ID CKN ++ +A+ L + ++ + ++ YN LIDGL
Sbjct: 399 IPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGL 448
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 165/355 (46%), Gaps = 23/355 (6%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP V +F+ L + LF + + PD YT+NIL++ CK G++
Sbjct: 225 PPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKN 284
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
V+ +++ P VT+ +L+ G C + + +A + + + PN +YN +ING
Sbjct: 285 VIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFC 344
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ AL LF EM I P VTY S+I G C A
Sbjct: 345 KIKMVDEALCLFHEMCC-----------------------RGIAPHKVTYNSLIDGLCKA 381
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
A L+ EM + + ++VT+N ++D CKN +D+A L+ + + G++PN Y
Sbjct: 382 GRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTY 441
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N L+DG C G++ A+++F + G ++Y+I+ING CK + A L +M
Sbjct: 442 NILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMED 501
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
GI PD V Y T+ LF + E+A KL EM GV + R + G N
Sbjct: 502 NGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVVVYAFEIRRTLVGRTLN 556
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 96/211 (45%), Gaps = 24/211 (11%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
C+F M R P ++N L L K L +++ + D+ TYN LI+
Sbjct: 353 LCLFHEMC-CRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLID 411
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
FCK V ++ +I PN T+ LI GLC ++ A +F L + G
Sbjct: 412 VFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNV 471
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
N +TYN +INGL + EG D+A+ L +M+D I PD
Sbjct: 472 NAWTYNIMINGLCK-----------------------EGLFDEAEVLLSKMEDNGIIPDA 508
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
VTY ++I+ + ++ +A+ LL EM+ +GV
Sbjct: 509 VTYETIIQALFHKDENEKAQKLLREMVIKGV 539
>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 150/414 (36%), Positives = 222/414 (53%), Gaps = 18/414 (4%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG-LFPDLYTYNILINCF 62
F ML + P P + FN+LFG +AK++HY T +SL K L+S G D+ T NI INC
Sbjct: 62 FHRMLTLTPFPC-IQDFNLLFGLVAKSQHYATAISLIKILHSLGDGSADVCTLNIAINCL 120
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C M + + GF VLG + + P VT +++ GLC E + A L K+ G N
Sbjct: 121 CHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNA 180
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
TY L+NGL + G T AL ++M N V G V +A L +
Sbjct: 181 RTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHE 240
Query: 171 MKDENINPDVVTYTSVIRGFCYA-NDWNEAKCLLIEMM-DQGVQPNVVTFNVIMDELCKN 228
M N+ P+VVTY +I+G C W E L EM+ ++G+ P+V TF++++D CK
Sbjct: 241 MGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKE 300
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM--ESMGCTHTVF 286
G + A ++ M++IGV PN YN+L+ G+CL ++ A +F M E GC +V
Sbjct: 301 GLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVV 360
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+++ LI+G+CK KE++ A+SL EM+ KG+ PDV + +L E+ + A +LF M
Sbjct: 361 THNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTM 420
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ G + T +DGL K EAV LFR + +LDI YN ++DG+
Sbjct: 421 KEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGM 474
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 168/358 (46%), Gaps = 27/358 (7%)
Query: 15 PPVCSFNILF-GCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINCFCKMGRVSHGF 72
P V ++N L G + + + LF + G+ PD+ T++IL++ FCK G +
Sbjct: 248 PNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAE 307
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGCEPNVFTYNTLIN 130
V+G ++R PN VT+ SLI G C S++ EA +F + GC P+V T+N+LI+
Sbjct: 308 SVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIH 367
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
G + VDKA L +M + ++PDV T+TS+I GF
Sbjct: 368 GWCKVKE-----------------------VDKAMSLLSEMVGKGLDPDVFTWTSLIGGF 404
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C A+ L M + G PN+ T V++D L K EA L M++ G+ +
Sbjct: 405 CEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDI 464
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
+YN ++DG C G++N A++L + G ++Y+I+I G C+ ++ A L +
Sbjct: 465 VIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRK 524
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
M G P+ YN L + + R+ K M+ G D T I L N
Sbjct: 525 MKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPVDATTAELLIRFLSAN 582
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 181/424 (42%), Gaps = 61/424 (14%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + N + L + L L +++ + G + TY L+N CK+G S
Sbjct: 143 PTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLCKIGDTSGALEC 202
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL-- 132
L ++++ PN V + +++ GLC + EA L ++ V EPNV TYN LI GL
Sbjct: 203 LKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCG 262
Query: 133 ----YRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKE--------- 166
+R G + LF EM + G F EG + +A+
Sbjct: 263 EFGGWREG-----VGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIG 317
Query: 167 ----------------LFLQMKD------------ENINPDVVTYTSVIRGFCYANDWNE 198
L QM++ E P VVT+ S+I G+C + ++
Sbjct: 318 VEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDK 377
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A LL EM+ +G+ P+V T+ ++ C+ K A L M + G PN ++D
Sbjct: 378 AMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLD 437
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G + A LF +M G + Y+I+++G CK ++ A L +L KG+K
Sbjct: 438 GLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKI 497
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
D YN + L ++ A +L +M+ +G + +Y F+ GL + I + +
Sbjct: 498 DSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYL 557
Query: 379 RTLR 382
+ ++
Sbjct: 558 QIMK 561
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 162/446 (36%), Positives = 224/446 (50%), Gaps = 50/446 (11%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGL-FPDLYTYNILINCF 62
F ML++ P PP + S N L + K KHY TV+SL L+S G P L T +I IN
Sbjct: 43 FHRMLHLHP-PPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSL 101
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
+G++ F V+ +I++ F + T T+L+KGLC + R EA L+ G +
Sbjct: 102 THLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDE 161
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
Y TLINGL + G T A+ L +M G + EG V +A L +
Sbjct: 162 VCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSE 221
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM-MDQGVQPNVVTFNVIMDELCKNG 229
M + I DV TY S+I GFC A + A LL EM M + V+P+V TFN+++D LCK G
Sbjct: 222 MVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLG 281
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+ EA + LMI+ G+ P+ N LM+G+CL G ++ AKE+F M G V SYS
Sbjct: 282 MVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYS 341
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF-------VVLFEIHQVE----- 337
LINGYCK K ++ AL L EM + + PD V YN L VL+E VE
Sbjct: 342 TLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRAS 401
Query: 338 -----------------------RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
+A LF + G++ + TY IDGLCK + A
Sbjct: 402 GQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAA 461
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
E+F+ L + C +IR YN +I+GL
Sbjct: 462 KEIFQLLSVKGCRPNIRTYNIMINGL 487
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 145/287 (50%), Gaps = 31/287 (10%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
PD+YT+NIL++ CK+G V+ V G +++ P+ V+ +L+ G C + EA +
Sbjct: 265 PDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEV 324
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL 169
F ++ G PNV +Y+TLING + VD+A L
Sbjct: 325 FDRMVERGKLPNVISYSTLINGYCKVK-----------------------MVDEALRLLT 361
Query: 170 QMKDENINPDVVTYTSVIRGFCYAN----DWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
+M N+ PD VTY ++ G + +W+ L+ M G P+++T+NV++D+
Sbjct: 362 EMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWD----LVEAMRASGQAPDLITYNVLLDDY 417
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
K +D+A L ++ G+ PN YN L+DG C GR+ AKE+F + GC +
Sbjct: 418 LKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNI 477
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
+Y+I+ING + ++ A +L EM+ G P+ V ++ L L E
Sbjct: 478 RTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRALLE 524
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 182/376 (48%), Gaps = 14/376 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
++D+ ++ S VC ++ G K D + L +++ G+ P+L YN++++
Sbjct: 148 LYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAI-ELLRKMEKGGVRPNLIMYNMVVDGL 206
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF-GCEPN 121
CK G V+ + ++ + T+ SLI G C + A L ++ + P+
Sbjct: 207 CKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPD 266
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFL 169
V+T+N L++ L + G A N+F M E V G + +AKE+F
Sbjct: 267 VYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFD 326
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M + P+V++Y+++I G+C +EA LL EM + + P+ VT+N ++D L K+G
Sbjct: 327 RMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSG 386
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
++ L++ M G P+ YN L+D + +++A LF + G + + +Y+
Sbjct: 387 RVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYN 446
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
ILI+G CK ++ A ++ + KG +P++ YN + L ++ A L EM D
Sbjct: 447 ILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDD 506
Query: 350 GVAADTWTYRTFIDGL 365
G + T+ + L
Sbjct: 507 GFPPNAVTFDPLVRAL 522
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 153/345 (44%), Gaps = 49/345 (14%)
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH-------------------TIVALNLF 145
+A + F ++ P++ + N L++ + +T H ++V L++F
Sbjct: 38 DAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIF 97
Query: 146 EEMASGNGEFG-----------------------------VEGFVDKAKELFLQMKDENI 176
+ G+ G ++G +A L+ +
Sbjct: 98 INSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGF 157
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
+ D V Y ++I G C +A LL +M GV+PN++ +N+++D LCK G + EA
Sbjct: 158 SFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACG 217
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMGCTHTVFSYSILINGY 295
L M+ G+ + F YN+L+ GFC G+ A L M V++++IL++
Sbjct: 218 LCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDAL 277
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
CK + A +++G M+ +G++PDVV N L + A ++FD M G +
Sbjct: 278 CKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNV 337
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+Y T I+G CK + EA+ L + D YNCL+DGL
Sbjct: 338 ISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGL 382
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/434 (30%), Positives = 220/434 (50%), Gaps = 49/434 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + L K + D + + + G+ P+ TYN +++ +C G+
Sbjct: 232 PNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+ VT+ SL+ LC R EA +F + G +P + TY TL+ G Y
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQG-YA 350
Query: 135 TGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDVV 181
T +V ++ ++ NG + +G VD+A +F +M+ + +NPD V
Sbjct: 351 TKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTV 410
Query: 182 TY-----------------------------------TSVIRGFCYANDWNEAKCLLIEM 206
TY S+I C + W++AK L++EM
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEM 470
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+D+G+ + + FN I+D CK G++ E+ +L DLM++IGV+PN Y+TL+DG+CL G++
Sbjct: 471 LDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKM 530
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ A +L SM S+G +Y+ LINGYCK +E AL L+ EM S G+ PD++ YN +
Sbjct: 531 DEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNII 590
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
LF+ + A +L+ + G + TY + GLCKN+ EA+ +F+ L +
Sbjct: 591 LQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDL 650
Query: 387 ELDIRAYNCLIDGL 400
+L+ R +N +I L
Sbjct: 651 QLETRTFNIMIGAL 664
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 136/419 (32%), Positives = 205/419 (48%), Gaps = 26/419 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG---LFPDLYTYNILI 59
+FD +L R + N +A++ V S + R+ G + P+L TY ILI
Sbjct: 41 VFDELLR-RGRGASIYGLNCALADVARHSPAAAV-SRYNRMARAGADEVTPNLCTYGILI 98
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGC 118
C GR+ GF LG +++ F +A+ FT L+KGLCA+ R +A + ++ GC
Sbjct: 99 GSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGC 158
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE--------------FGVEGFVDKA 164
PNVF+YN L+ GL + AL L + M G+ F EG +DKA
Sbjct: 159 IPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKA 218
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
+ +M D I P+VVTY S+I C A ++A +L M+ GV PN T+N I+
Sbjct: 219 YGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHG 278
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
C +G+ EA L M GV P+ YN+LMD C GR A+++F SM G
Sbjct: 279 YCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338
Query: 285 VFSYSILINGYCKNK---EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
+ +Y L+ GY E+ G L L M+ GI P+ +++ L + +V++A
Sbjct: 339 ITTYGTLLQGYATKGALVEMHGLLDL---MVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+F +M++ G+ DT TY T I LCK+ + +A+ F + + YN LI L
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 183/387 (47%), Gaps = 25/387 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG--LFPDLYTYNILINCFCKMGRVSHGF 72
P V S+NIL L L L + + G PD+ +Y +IN F K G + +
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+L PN VT+ S+I LC + +A + T + G PN TYN++++G
Sbjct: 220 GTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+G A+ GF+ K M + + PDVVTY S++ C
Sbjct: 280 CSSGQPKEAI----------------GFLKK-------MHSDGVEPDVVTYNSLMDYLCK 316
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
EA+ + M +G++P + T+ ++ G + E LLDLM++ G+ PN +V
Sbjct: 317 NGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 376
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
++ L+ + G+V++A +F M G +Y +I CK+ +E A+ + +M+
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
+ + P ++YN+L L + ++A +L EM G+ DT + + ID CK ++
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDG 399
E+ +LF + + + +I Y+ LIDG
Sbjct: 497 ESEKLFDLMVRIGVKPNIITYSTLIDG 523
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 200/433 (46%), Gaps = 47/433 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L KN +F + GL P++ TY L+ + G + +
Sbjct: 302 PDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 361
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++R+ PN F+ LI + ++ +A +F+K+R G P+ TY T+I L +
Sbjct: 362 LDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421
Query: 135 TGHTIVALNLFEEM-----ASGN-------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+G A+ FE+M + GN + DKAKEL L+M D I D +
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ S+I C E++ L M+ GV+PN++T++ ++D C GKMDEA++LL M+
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMV 541
Query: 243 QIGVRPNAFVYNTLMDGFC-----------------------------------LTGRVN 267
+G++P+ YNTL++G+C T R
Sbjct: 542 SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
AKEL+V + G + +Y+I+++G CKN + AL ++ + ++ + +N +
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 661
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
L ++ + + A LF + +G+ D TY + L + + E +LF ++ C
Sbjct: 662 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCT 721
Query: 388 LDIRAYNCLIDGL 400
+ R N ++ L
Sbjct: 722 ANSRMLNSIVRKL 734
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 161/399 (40%), Gaps = 49/399 (12%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F+IL AK D + +F ++ GL PD TY +I CK GRV +++
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436
Query: 80 RSCFTPNAVTFTSLIKGLC-----------------------------------AESRIM 104
+P + + SLI LC E R++
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG------------- 151
E+ LF + G +PN+ TY+TLI+G G A L M S
Sbjct: 497 ESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556
Query: 152 NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
NG + D A LF +M+ ++PD++TY +++G AK L + + + G
Sbjct: 557 NGYCKISRMED-ALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
Q + T+N+I+ LCKN DEA R+ + ++ +N ++ GR + AK+
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
LF ++ + G V +YS++ + +E L+ M G + + N++ L
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 735
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
+ + RA + + + T F+D L Y
Sbjct: 736 QRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSGGKY 774
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/398 (33%), Positives = 216/398 (54%), Gaps = 24/398 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M++ RP P + F L +AK YD V+SLF+++ G+ P L T NI+++C
Sbjct: 70 LFTRMVHSRPLPS-IIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCV 128
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C + LG++++ F P+ VTFTSL+ G C +RI +A ALF ++ G +PNV
Sbjct: 129 CLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNV 188
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TY TLI L + H ++ A ELF QM P+VVT
Sbjct: 189 VTYTTLIRCLCKNRH-----------------------LNHAVELFNQMGTNGSRPNVVT 225
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++ G C W +A LL +MM + ++PNV+TF ++D K GK+ EA L ++MI
Sbjct: 226 YNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI 285
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q+ V P+ F Y +L++G C+ G ++ A+++F ME GC Y+ LI+G+CK+K +E
Sbjct: 286 QMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVE 345
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
+ ++ EM KG+ + + Y L + + + A ++F++M D TY +
Sbjct: 346 DGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL 405
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
DGLC N + +A+ +F +R + +++I Y +I G+
Sbjct: 406 DGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGM 443
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 176/357 (49%), Gaps = 24/357 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD +L M P V ++ L CL KN+H + + LF ++ + G P++ TYN L+
Sbjct: 175 LFDQILGM-GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGL 233
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C++GR +L +++ PN +TFT+LI ++MEA L+ + P+V
Sbjct: 234 CEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDV 293
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
FTY +LINGL + G +D+A+++F M+ P+ V
Sbjct: 294 FTYGSLINGL-----------------------CMYGLLDEARQMFYLMERNGCYPNEVI 330
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT++I GFC + + + EM +GV N +T+ V++ C G+ D A + + M
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
P+ YN L+DG C G+V +A +F M + +Y+I+I G CK ++E
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVE 450
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
A L+ + SKG+KP+V+ Y T+ + A LF +M+ DG + Y+
Sbjct: 451 DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 119/239 (49%)
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
+ A +LF +M P ++ +T ++ N ++ L +M G+ P + T N++
Sbjct: 65 NDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIV 124
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
M +C + + AS L M+++G P+ + +L++G+C R+ A LF + MG
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
V +Y+ LI CKN+ + A+ L+ +M + G +P+VV YN L L EI + A
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
L +M + + + T+ ID K ++EA EL+ + + D+ Y LI+GL
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 105/218 (48%)
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+Y ++R + +N+A L M+ P+++ F ++ + K + D L + M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+G+ P N +M CL+ + RA M +G + +++ L+NGYC I
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A++L+ ++L G KP+VV Y TL L + + A +LF++M +G + TY
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ GLC+ +A L R + + E ++ + LID
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDA 267
>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 524
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 143/411 (34%), Positives = 215/411 (52%), Gaps = 33/411 (8%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAK--NKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
F ML M PSP + FN + G L K N +Y +SL+ RL + P + T+N +INC
Sbjct: 34 FYRMLRMNPSPS-IIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFNTVINC 92
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
+C +G + F VL +IL+ + P+ +T T+LIKGLC ++ EA + G N
Sbjct: 93 YCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLN 152
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFL 169
+Y LINGL + G T AL + ++ V E V +A EL+
Sbjct: 153 EVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYS 212
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
QM + ++PDVVT++++I GFC + EA L EM+ + P+V TFN+++D LCK G
Sbjct: 213 QMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEG 272
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
E +L +M++ +VN+AK +F + T V SY+
Sbjct: 273 STKETKNVLAVMMK------------------EVNQVNKAKHVFNIIGKRRVTPDVHSYT 314
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
I+I CK K ++ ALSL+ EM KGI PD V Y++L L + ++ A++L D+M
Sbjct: 315 IIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHAR 374
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G AD TY +F+ LCKN + +AV L + ++ + +I YN LIDGL
Sbjct: 375 GQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGL 425
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 179/370 (48%), Gaps = 29/370 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S+ IL L K L + ++++ + ++ Y+ +I+ CK V+ + + ++
Sbjct: 155 SYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQM 214
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ +P+ VTF++LI G C + EA LF ++ + P+V T+N L++ L + G T
Sbjct: 215 IVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGST 274
Query: 139 IVALNLFEEMASGNGE-------FGVEG----------------------FVDKAKELFL 169
N+ M + F + G VD+A LF
Sbjct: 275 KETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFN 334
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M+ + I PD VTY+S+I G C + + A LL +M +G +V+T+ + LCKN
Sbjct: 335 EMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNH 394
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
++D+A L+ + G++PN YN L+DG C GR A+ +F + G TV++Y+
Sbjct: 395 QVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYN 454
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
I+ING C + A++L +M G PDVV Y T+ LF+ + +A KL EM
Sbjct: 455 IMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIAR 514
Query: 350 GVAADTWTYR 359
G+ + R
Sbjct: 515 GLLEEKVEIR 524
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 156/328 (47%), Gaps = 48/328 (14%)
Query: 10 MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG--- 66
++ P V +F+ L + LF + T + PD+ T+NIL++ CK G
Sbjct: 216 VKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTK 275
Query: 67 -----------------RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
+ H F ++G+ TP+ ++T +IK LC + EA +L
Sbjct: 276 ETKNVLAVMMKEVNQVNKAKHVFNIIGK---RRVTPDVHSYTIIIKRLCKIKMVDEALSL 332
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL 169
F ++R G P+ TY++LI+GL ++ + A EL
Sbjct: 333 FNEMRCKGITPDKVTYSSLIDGLCKSER-----------------------ISHAWELLD 369
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
QM DV+TYTS + C + ++A L+ ++ DQG+QPN+ T+N+++D LCK G
Sbjct: 370 QMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEG 429
Query: 230 KMDEASRLL-DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
+ + A + DL+I+ G + + YN +++G CL G + A L ME GCT V +Y
Sbjct: 430 RFENAQVIFQDLLIK-GYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTY 488
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGI 316
+I KN E A L EM+++G+
Sbjct: 489 ETIIRALFKNDENHKAEKLLREMIARGL 516
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 122/265 (46%), Gaps = 21/265 (7%)
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVD 162
+ +A + F ++ P++ +N ++ L + S N + +
Sbjct: 27 VHDAISSFYRMLRMNPSPSIIEFNKILGSLVK---------------SNNNNYPI----- 66
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
A L+ +++ I P +VT+ +VI +C+ + + A +L +++ G P+ +T ++
Sbjct: 67 -AISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLI 125
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
LC NGK+ EA D +I G R N Y L++G C G A ++ ++
Sbjct: 126 KGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVN 185
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
V YS +I+ CK K + A LY +M+ K + PDVV ++ L + Q + AF L
Sbjct: 186 TNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGL 245
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCK 367
F EM + D T+ +D LCK
Sbjct: 246 FHEMVLTNINPDVCTFNILVDALCK 270
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 124/261 (47%), Gaps = 3/261 (1%)
Query: 143 NLFEEMASGNGEFGVEGF-VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE--A 199
+LF + + +F V A F +M N +P ++ + ++ +N+ N A
Sbjct: 8 SLFRTLHYSHSKFNSNHVDVHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIA 67
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
L + + P++VTFN +++ C G+MD A +L ++++G P+ TL+ G
Sbjct: 68 ISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKG 127
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
CL G+V+ A + + G SY ILING CK E AL + ++ K + +
Sbjct: 128 LCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTN 187
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
VV+Y+T+ L + V A++L+ +M V+ D T+ I G C EA LF
Sbjct: 188 VVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFH 247
Query: 380 TLRILKCELDIRAYNCLIDGL 400
+ + D+ +N L+D L
Sbjct: 248 EMVLTNINPDVCTFNILVDAL 268
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 126/386 (32%), Positives = 208/386 (53%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L KN +F + GL PD+ TY L+ + G + +
Sbjct: 299 PDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHAL 358
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++R+ P+ F LI + ++ EA +F+K+R G PNV TY +I L +
Sbjct: 359 LDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCK 418
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+G VD A F QM DE + P+++ YTS+I C +
Sbjct: 419 SGS-----------------------VDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFD 455
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
W++A+ L++EM+D+G+ N + FN I+ CK G++ E+ +L DLM++IGV+PN Y+
Sbjct: 456 KWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYS 515
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+DG+CL G+++ A +L SM S+G +Y+ LINGYC+ ++ AL+L+ EM+S
Sbjct: 516 TLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSS 575
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+ P+++ YN + LF + A +L+ + + G + TY + GLCKN+ EA
Sbjct: 576 GVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEA 635
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ +F+ L + +L+ R +N +I L
Sbjct: 636 LRMFQNLCLTDLQLETRTFNIMIGAL 661
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/417 (30%), Positives = 198/417 (47%), Gaps = 21/417 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG---LFPDLYTYNILI 59
+FD +L R + N +A++ V S + R+ G + P ++TY ILI
Sbjct: 37 VFDELLR-RGRGASIYGLNRALADVARHSPAAAV-SRYNRMARAGAGKVTPTVHTYGILI 94
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGC 118
C C+ GR+ GF LG +++ F A+TFT L+KGLCA+ R +A + ++ C
Sbjct: 95 GCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSC 154
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE---------------FGVEGFVDK 163
P+VF+ L+ GL + AL L MA G F EG DK
Sbjct: 155 MPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDK 214
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
A + +M D I+PDVVTY+S+I C ++A +L M+ GV PN +T+N I+
Sbjct: 215 AYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILH 274
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
C + + EA L M GV P+ YN+LMD C GR A+++F SM G
Sbjct: 275 GYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEP 334
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
+ +Y L+ GY + +L M+ GI PD ++N L + +V+ A +F
Sbjct: 335 DIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVF 394
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+M++ G+ + TY I LCK+ + +A+ F + +I Y LI L
Sbjct: 395 SKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSL 451
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 165/403 (40%), Gaps = 47/403 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P FNIL AK + D + +F ++ GL P++ TY +I CK G V +
Sbjct: 369 PDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLY 428
Query: 75 LGRILRSCFTPNAVTFTSLIKGLC-----------------------------------A 99
+++ TPN + +TSLI LC
Sbjct: 429 FEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCK 488
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG--- 156
E R++E+ LF + G +PNV TY+TLI+G G A L M S +
Sbjct: 489 EGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVT 548
Query: 157 ----VEGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
+ G+ +D A LF +M ++P+++TY +++G + AK L + +
Sbjct: 549 YNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGIT 608
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
G Q + T+N+I+ LCKN DEA R+ + ++ +N ++ GR +
Sbjct: 609 KSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRND 668
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
AK+LFV+ S G ++Y ++ +E L+ M G D + N +
Sbjct: 669 EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIV 728
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
L + ++ RA + + + T FID L Y
Sbjct: 729 RELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 771
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 126/386 (32%), Positives = 208/386 (53%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L KN +F + GL PD+ TY L+ + G + +
Sbjct: 299 PDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHAL 358
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++R+ P+ F LI + ++ EA +F+K+R G PNV TY +I L +
Sbjct: 359 LDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCK 418
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+G VD A F QM DE + P+++ YTS+I C +
Sbjct: 419 SGS-----------------------VDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFD 455
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
W++A+ L++EM+D+G+ N + FN I+ CK G++ E+ +L DLM++IGV+PN Y+
Sbjct: 456 KWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYS 515
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+DG+CL G+++ A +L SM S+G +Y+ LINGYC+ ++ AL+L+ EM+S
Sbjct: 516 TLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSS 575
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+ P+++ YN + LF + A +L+ + + G + TY + GLCKN+ EA
Sbjct: 576 GVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEA 635
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ +F+ L + +L+ R +N +I L
Sbjct: 636 LRMFQNLCLTDLQLETRTFNIMIGAL 661
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 186/385 (48%), Gaps = 19/385 (4%)
Query: 35 TVLSLFKRLNSTG---LFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 91
+S + R+ G + P ++TY ILI C C+ GR+ GF LG +++ F A+TFT
Sbjct: 67 AAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFT 126
Query: 92 SLIKGLCAESRIMEAAAL-FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS 150
L+KGLCA+ R +A + ++ C P+VF+ L+ GL + AL L MA
Sbjct: 127 PLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMAD 186
Query: 151 GNGE---------------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
G F EG DKA + +M D I+PDVVTY+S+I C
Sbjct: 187 DRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQA 246
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
++A +L M+ GV PN +T+N I+ C + + EA L M GV P+ YN+
Sbjct: 247 MDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNS 306
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
LMD C GR A+++F SM G + +Y L+ GY + +L M+ G
Sbjct: 307 LMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNG 366
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
I PD ++N L + +V+ A +F +M++ G+ + TY I LCK+ + +A+
Sbjct: 367 IHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAM 426
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
F + +I Y LI L
Sbjct: 427 LYFEQMIDEGLTPNIIVYTSLIHSL 451
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 161/381 (42%), Gaps = 50/381 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P FNIL AK + D + +F ++ GL P++ TY +I CK G V +
Sbjct: 369 PDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLY 428
Query: 75 LGRILRSCFTPNAVTFTSLIKGLC-----------------------------------A 99
+++ TPN + +TSLI LC
Sbjct: 429 FEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCK 488
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG--- 156
E R++E+ LF + G +PNV TY+TLI+G G A L M S +
Sbjct: 489 EGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVT 548
Query: 157 ----VEGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
+ G+ +D A LF +M ++P+++TY +++G + AK L + +
Sbjct: 549 YNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGIT 608
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
G Q + T+N+I+ LCKN DEA R+ + ++ +N ++ GR +
Sbjct: 609 KSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRND 668
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
AK+LF ++ + G V +YS++ + +E L+ M G + + N++
Sbjct: 669 EAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIV 728
Query: 328 VVLFEIHQVERA---FKLFDE 345
L + + RA + DE
Sbjct: 729 RKLLQRGDITRAGTYLSMIDE 749
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 15/252 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFG-CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
+FD M+ + P + ++ G CLA D L + S G+ PD TYN LIN
Sbjct: 498 LFDLMVRIGVKPNVITYSTLIDGYCLAGK--MDEATKLLSSMFSVGMKPDCVTYNTLING 555
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
+C++ R+ + ++ S +PN +T+ +++GL R A L+ + G +
Sbjct: 556 YCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLE 615
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFV------------DKAKELFL 169
+ TYN +++GL + T AL +F+ + + + F D+AK+LF
Sbjct: 616 LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFA 675
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+ + PDV TY+ + E L + M + G N N I+ +L + G
Sbjct: 676 ALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 735
Query: 230 KMDEASRLLDLM 241
+ A L ++
Sbjct: 736 DITRAGTYLSMI 747
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 227/453 (50%), Gaps = 56/453 (12%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F YM+ RP P V F L G + + D V+SL K++ + + Y++ IL+ CF
Sbjct: 68 LFGYMVRSRPLPS-VIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCF 126
Query: 63 CKMGRVSHGFVVLGRILRSCF-------------------------------TPNAVTFT 91
C ++ G+I + F PN VTFT
Sbjct: 127 CSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCKPNVVTFT 186
Query: 92 SLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG 151
+L+ GLC E R++EA AL ++ G +PN TY T+++G+ + G T+ ALNL +M
Sbjct: 187 TLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEV 246
Query: 152 N-------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+ +G A LF++M+++ I PD+VTY +I GFC + W++
Sbjct: 247 SHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSD 306
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A+ LL EM+++ + P+VVTF+ +++ K GK EA L D M+ + P+ Y++++D
Sbjct: 307 AEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMID 366
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
GFC R++ A+ +F + GC+ + +++ LI GYC+ K ++ + L EM G+
Sbjct: 367 GFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVA 426
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
+ + Y TL ++ + A L EM GV + T T +DGLC N + +A+E+F
Sbjct: 427 NTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMF 486
Query: 379 RTLRILK-----------CELDIRAYNCLIDGL 400
+ ++ K E D++ YN LI GL
Sbjct: 487 KAMQKSKMDIDASRPFNGVEPDVQTYNILICGL 519
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 132/445 (29%), Positives = 205/445 (46%), Gaps = 65/445 (14%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FN L L L LF ++ P++ T+ L+N C+ GRV +
Sbjct: 149 PTVVTFNTLLHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVAL 204
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLR-VFGCEPNVFTYNTLINGLY 133
L R+L PN +T+ +++ G+C + A L K+ V PNV YNT+I+GL+
Sbjct: 205 LDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLW 264
Query: 134 RTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDV 180
+ G A NLF EM NG F + G A++L +M + INPDV
Sbjct: 265 KDGRHSDAHNLFIEMQEKEIFPDIVTYNCMING-FCISGRWSDAEQLLQEMLERKINPDV 323
Query: 181 VT-----------------------------------YTSVIRGFCYANDWNEAKCLLIE 205
VT Y+S+I GFC N + A+ +
Sbjct: 324 VTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYL 383
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
+G P+++TFN ++ C+ ++D+ +LL M + G+ N Y TL+ GFC G
Sbjct: 384 TPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGD 443
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK----------- 314
+N A++L M S G V + + L++G C N +++ AL ++ M
Sbjct: 444 LNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFN 503
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G++PDV YN L L + A +L++EM G+ DT TY + IDGLCK S + EA
Sbjct: 504 GVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
++F ++ D+ +N LI G
Sbjct: 564 TQMFDSMGSKSFSPDVVTFNTLITG 588
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 189/427 (44%), Gaps = 58/427 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N + L K+ + +LF + +FPD+ TYN +IN FC GR S +
Sbjct: 251 PNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQL 310
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L P+ VTF++LI E + EA L+ ++ P+ TY+++I+G +
Sbjct: 311 LQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCK 370
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
A ++F + + F VD +L +M + + + +T
Sbjct: 371 QNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTIT 430
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGV------------------------------- 211
YT++I GFC D N A+ LL EM+ GV
Sbjct: 431 YTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQ 490
Query: 212 ---------------QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+P+V T+N+++ L GK EA L + M G+ P+ Y+++
Sbjct: 491 KSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 550
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG C R++ A ++F SM S + V +++ LI GYCK ++ L L+ EM +GI
Sbjct: 551 IDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGI 610
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
D + Y TL ++ ++ A +F EM GV DT T R + GL + AV
Sbjct: 611 VADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVA 670
Query: 377 LFRTLRI 383
+ L++
Sbjct: 671 MLEDLQM 677
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 169/345 (48%), Gaps = 13/345 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
++D ML R P +++ + K D +F + G PD+ T+N LI +
Sbjct: 345 LYDEMLP-RSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGY 403
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ RV G +L + + N +T+T+LI G C + A L ++ G PNV
Sbjct: 404 CRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNV 463
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
T NTL++GL G AL +F+ M + +D ++ + PDV T
Sbjct: 464 VTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD------IDASRPF------NGVEPDVQT 511
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I G + EA+ L EM +G+ P+ +T++ ++D LCK ++DEA+++ D M
Sbjct: 512 YNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 571
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
P+ +NTL+ G+C G V+ ELF M G +Y LI G+ K I+
Sbjct: 572 SKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNID 631
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
GAL ++ EM+S G+ PD + + L+ ++ERA + +++Q
Sbjct: 632 GALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQ 676
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 4/170 (2%)
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+D+A L M++ P+ + LM GR + L ME + +S++I
Sbjct: 62 LDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTI 121
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L+ +C ++ ALS +G++ G P VV +NTL L ++ A LF +M +
Sbjct: 122 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCKPN 181
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
V T+ T ++GLC+ +VEAV L + + + Y ++DG+
Sbjct: 182 VV----TFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 227
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 60/139 (43%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ + L K D +F + S PD+ T+N LI +CK G V G +
Sbjct: 542 PDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLEL 601
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + +A+T+ +LI G I A +F ++ G P+ T ++ GL+
Sbjct: 602 FCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWS 661
Query: 135 TGHTIVALNLFEEMASGNG 153
A+ + E++ G
Sbjct: 662 KEELERAVAMLEDLQMSVG 680
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 138/448 (30%), Positives = 228/448 (50%), Gaps = 50/448 (11%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ +FD ML+ SP V ++N + L+K + D + R+ G P+ T+N L++
Sbjct: 223 YHLFDQMLDQGLSPD-VVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLH 281
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+C G+ + V R+ R P+ T+ +L+ LC R MEA +F + G +P
Sbjct: 282 GYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKP 341
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKEL 167
N TY TL++G Y T ++V ++ +M NG + G VD A L
Sbjct: 342 NSATYGTLLHG-YATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLL 400
Query: 168 FLQMKDENINPDVVTY-----------------------------------TSVIRGFCY 192
F +M+ + +NPD VTY ++I G C
Sbjct: 401 FSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCA 460
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
+ W++A+ L +EM+ +G+ PN + FN +++ LCK G + A + DLM+++ V+ +
Sbjct: 461 RDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVIT 520
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
YNTL+DG+CL G+V+ A +L M G +Y+ +INGYCKN IE A SL+ +M
Sbjct: 521 YNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMA 580
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
SKG+ P +V Y+T+ LF+ + A +L+ M + G+ D TY + GLC+N+
Sbjct: 581 SKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTD 640
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
+A+ +F+ L ++ L+ R +N +ID L
Sbjct: 641 DALRIFQNLYLIDFHLENRTFNIMIDAL 668
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/419 (31%), Positives = 207/419 (49%), Gaps = 24/419 (5%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRL---NSTGLFPDLYTYNILIN 60
FD +L+ RP+ + N A++ +SLF+R+ + P+L TY+++I+
Sbjct: 42 FDELLH-RPTTSSIVDLNRALSDAARHSPA-VAISLFRRMVMVARPKVPPNLITYSVVID 99
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCE 119
C ++G + F LGR++RS +T A+TF+ L+K LC + R EA + ++ V GC
Sbjct: 100 CCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCT 159
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG------------VEGFV------ 161
PNVF+Y L+ GL + AL+L M + G + G +
Sbjct: 160 PNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQL 219
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
D A LF QM D+ ++PDVVTY S+I A ++A +L+ M+ G PN +T N +
Sbjct: 220 DTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSL 279
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
+ C +GK ++A + M + GV P+ F YNTLM C GR A+++F SM G
Sbjct: 280 LHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGH 339
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
+Y L++GY + L M+ GI+PD I+N L + +V+ A
Sbjct: 340 KPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAML 399
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LF +M+R G+ DT TY +D LC + +A+ F L D + LI GL
Sbjct: 400 LFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGL 458
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 173/390 (44%), Gaps = 47/390 (12%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FNIL G K+ D + LF ++ GL PD TY I+++ C +G+V GR++
Sbjct: 381 FNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLI 440
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
TP+AV F +LI GLCA + +A L ++ G PN +NTL+N L + G
Sbjct: 441 SEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVA 500
Query: 140 VALNLFEEMASGNGEFGV------------EGFVDKAKEL-------------------- 167
A N+F+ M + + V G VD+A +L
Sbjct: 501 RAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMI 560
Query: 168 ---------------FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
F QM + +NP +VTY+++++G A AK L + M+ G++
Sbjct: 561 NGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIK 620
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
++ T+N+I+ LC+N D+A R+ + I +N ++D GR + AK+L
Sbjct: 621 FDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDL 680
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
F S+ + G V +Y +++ + +E L+ + G + + N L L +
Sbjct: 681 FASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQ 740
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
+V +A ++ + + + T + +
Sbjct: 741 KGEVRKAGVYLSKIDENNFSLEASTAESLV 770
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 136/400 (34%), Positives = 214/400 (53%), Gaps = 24/400 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F M++ +P P + F L A + Y+TV+ +++ G+ DLY++ ILI+
Sbjct: 56 FALFFEMVHSQP-LPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CFC+ R+S VLG++++ + P+ VTF SL+ G C +RI +A +L + G EP
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
NV YNTLI+GL + G +AL L EM + + + DV
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEM-----------------------EKKGLGADV 211
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY +++ G CY+ W++A +L +MM + + P+VVTF ++D K G +DEA L
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE 271
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
MIQ V PN YN++++G C+ GR+ AK+ F M S GC V +Y+ LI+G+CK +
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
++ + L+ M +G D+ YNTL ++ ++ A +F M V D T+
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ GLC N I A+ F +R + + I AYN +I GL
Sbjct: 392 LLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGL 431
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 107/247 (43%), Gaps = 35/247 (14%)
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVT------------------------------- 217
GF ++ + +A L EM+ P++V
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 218 ----FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
F +++ C+ ++ A +L M+++G P+ + +L+ GFCL R+ A L
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
+ M G V Y+ LI+G CKN E+ AL L EM KG+ DVV YNTL L
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
+ A ++ +M + + D T+ ID K + EA EL++ + + + Y
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 394 NCLIDGL 400
N +I+GL
Sbjct: 285 NSIINGL 291
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 220/434 (50%), Gaps = 49/434 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ + L K + D + + + G+ P+ TYN +++ +C G+
Sbjct: 232 PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+ VT+ SL+ LC R EA +F + G +P + TY TL+ G Y
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQG-YA 350
Query: 135 TGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDVV 181
T +V ++ ++ NG + +G VD+A +F +M+ + +NPD V
Sbjct: 351 TKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTV 410
Query: 182 TY-----------------------------------TSVIRGFCYANDWNEAKCLLIEM 206
TY S+I C + W++AK L++EM
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEM 470
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+D+G+ + + FN I+D CK G++ E+ +L DLM++IGV+P+ Y+TL+DG+CL G++
Sbjct: 471 LDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 530
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ A +L SM S+G +Y+ LINGYCK +E AL L+ EM S G+ PD++ YN +
Sbjct: 531 DEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNII 590
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
LF+ + A +L+ + G + TY + GLCKN+ EA+ +F+ L +
Sbjct: 591 LQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDL 650
Query: 387 ELDIRAYNCLIDGL 400
+L+ R +N +I L
Sbjct: 651 QLETRTFNIMIGAL 664
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 136/419 (32%), Positives = 206/419 (49%), Gaps = 26/419 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG---LFPDLYTYNILI 59
+FD +L R + N +A++ V S + R+ G + P+L TY ILI
Sbjct: 41 VFDELLR-RGRGASIYGLNCALADVARHSPAAAV-SRYNRMARAGADEVTPNLCTYGILI 98
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGC 118
C GR+ GF LG +++ F +A+ FT L+KGLCA+ R +A + ++ GC
Sbjct: 99 GSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGC 158
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE--------------FGVEGFVDKA 164
PNVF+YN L+ GL + AL L + M G+ F EG +DKA
Sbjct: 159 IPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKA 218
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
+ +M D I P+VVTY+S+I C A ++A +L M+ GV PN T+N I+
Sbjct: 219 YGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHG 278
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
C +G+ EA L M GV P+ YN+LMD C GR A+++F SM G
Sbjct: 279 YCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338
Query: 285 VFSYSILINGYCKNK---EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
+ +Y L+ GY E+ G L L M+ GI P+ +++ L + +V++A
Sbjct: 339 ITTYGTLLQGYATKGALVEMHGLLDL---MVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+F +M++ G+ DT TY T I LCK+ + +A+ F + + YN LI L
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 184/387 (47%), Gaps = 25/387 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG--LFPDLYTYNILINCFCKMGRVSHGF 72
P V S+NIL L L L + + G PD+ +Y +IN F K G + +
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+L PN VT++S+I LC + +A + T + G PN TYN++++G
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+G A+ GF+ K M + + PDVVTY S++ C
Sbjct: 280 CSSGQPKEAI----------------GFLKK-------MHSDGVEPDVVTYNSLMDYLCK 316
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
EA+ + M +G++P + T+ ++ G + E LLDLM++ G+ PN +V
Sbjct: 317 NGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 376
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
++ L+ + G+V++A +F M G +Y +I CK+ +E A+ + +M+
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
+ + P ++YN+L L + ++A +L EM G+ DT + + ID CK ++
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDG 399
E+ +LF + + + DI Y+ LIDG
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDG 523
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 200/433 (46%), Gaps = 47/433 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L KN +F + GL P++ TY L+ + G + +
Sbjct: 302 PDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 361
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++R+ PN F+ LI + ++ +A +F+K+R G P+ TY T+I L +
Sbjct: 362 LDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421
Query: 135 TGHTIVALNLFEEM-----ASGN-------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+G A+ FE+M + GN + DKAKEL L+M D I D +
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ S+I C E++ L M+ GV+P+++T++ ++D C GKMDEA++LL M+
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 541
Query: 243 QIGVRPNAFVYNTLMDGFC-----------------------------------LTGRVN 267
+G++P+ YNTL++G+C T R
Sbjct: 542 SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
AKEL+V + G + +Y+I+++G CKN + AL ++ + ++ + +N +
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 661
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
L ++ + + A LF + +G+ D TY + L + + E +LF ++ C
Sbjct: 662 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCT 721
Query: 388 LDIRAYNCLIDGL 400
+ R N ++ L
Sbjct: 722 ANSRMLNSIVRKL 734
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 161/399 (40%), Gaps = 49/399 (12%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F+IL AK D + +F ++ GL PD TY +I CK GRV +++
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436
Query: 80 RSCFTPNAVTFTSLIKGLC-----------------------------------AESRIM 104
+P + + SLI LC E R++
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG------------- 151
E+ LF + G +P++ TY+TLI+G G A L M S
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556
Query: 152 NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
NG + D A LF +M+ ++PD++TY +++G AK L + + + G
Sbjct: 557 NGYCKISRMED-ALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
Q + T+N+I+ LCKN DEA R+ + ++ +N ++ GR + AK+
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
LF ++ + G V +YS++ + +E L+ M G + + N++ L
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 735
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
+ + RA + + + T F+D L Y
Sbjct: 736 QRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSGGKY 774
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 136/400 (34%), Positives = 214/400 (53%), Gaps = 24/400 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F M++ +P P + F L A + Y+TV+ +++ G+ DLY++ ILI+
Sbjct: 56 FALFFEMVHSQP-LPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CFC+ R+S VLG++++ + P+ VTF SL+ G C +RI +A +L + G EP
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
NV YNTLI+GL + G +AL L EM + + + DV
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEM-----------------------EKKGLGADV 211
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY +++ G CY+ W++A +L +MM + + P+VVTF ++D K G +DEA L
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE 271
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
MIQ V PN YN++++G C+ GR+ AK+ F M S GC V +Y+ LI+G+CK +
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
++ + L+ M +G D+ YNTL ++ ++ A +F M V D T+
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ GLC N I A+ F +R + + I AYN +I GL
Sbjct: 392 LLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGL 431
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 138/400 (34%), Positives = 214/400 (53%), Gaps = 24/400 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F ML RP P + F + +AK +D V+ L+ ++ + G+ DLY++ ILI+
Sbjct: 589 FSLFCEMLQSRP-IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 647
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CFC+ R+S +LG++++ F P+ VT SL+ G C +R EA +L + FG P
Sbjct: 648 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 707
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
NV YNT+INGL + ++ A E+F M+ + I D
Sbjct: 708 NVVIYNTVINGLCKNRD-----------------------LNNALEVFYCMEKKGIRADA 744
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY ++I G + W +A LL +M+ + + PNV+ F ++D K G + EA L
Sbjct: 745 VTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKE 804
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
MI+ V PN F YN+L++GFC+ G + AK +F M S GC V +Y+ LI G+CK+K
Sbjct: 805 MIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKR 864
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+E + L+ EM +G+ D YNTL + ++ A K+F+ M GV+ D TY
Sbjct: 865 VEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNI 924
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+D LC N I +A+ + L+ + ++DI YN +I GL
Sbjct: 925 LLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 964
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 170/366 (46%), Gaps = 27/366 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N + L KN+ + L +F + G+ D TYN LI+ GR + +
Sbjct: 707 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 766
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ PN + FT+LI E ++EA L+ ++ PNVFTYN+LING
Sbjct: 767 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING--- 823
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
F + G + AK +F M + PDVVTY ++I GFC +
Sbjct: 824 --------------------FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSK 863
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ L EM QG+ + T+N ++ C+ GK++ A ++ + M+ GV P+ YN
Sbjct: 864 RVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYN 923
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+D C G++ +A + ++ + +Y+I+I G C+ +++ A L+ + K
Sbjct: 924 ILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRK 983
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+KPD + Y T+ L A KL M+ DG Y D ++ Y +
Sbjct: 984 GVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY----DETLRDHYTSLS 1039
Query: 375 VELFRT 380
EL +
Sbjct: 1040 AELIKA 1045
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 195/482 (40%), Gaps = 106/482 (21%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L K + D + LF+R++ G D++TYN LI+ +C++G++ +
Sbjct: 314 PNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDI 373
Query: 75 LGRILRSCFTPNAVT-----------------------------------FTSLIKGLCA 99
++ TP+ +T + +I GLC
Sbjct: 374 FCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCK 433
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNL--------------- 144
++ +A LF +L V G +P+ TY +I GL + G A L
Sbjct: 434 ADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNA 493
Query: 145 ----FEEMASGNGEFG----------------------------VEGFVDKAKELFLQMK 172
EE +S N E V+GFV + +L ++
Sbjct: 494 EDDHLEEHSSSNKEISLSLREIWERSKSNPFWMQRLIPIAFSSSVKGFV---RRHYLLLE 550
Query: 173 DENINPDVVTYTSVIRGFCYANDW--------NEAKC--------LLIEMMDQGVQPNVV 216
N NP+ TS+ R F A+ NE C L EM+ P++V
Sbjct: 551 RGN-NPE----TSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIV 605
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
F ++ + K K D L M +G+ + + + L+ FC R++ A L M
Sbjct: 606 DFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKM 665
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
+G ++ + L+NG+C+ + A+SL M G P+VVIYNT+ L + +
Sbjct: 666 MKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDL 725
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
A ++F M++ G+ AD TY T I GL + +A L R + K + ++ + L
Sbjct: 726 NNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTAL 785
Query: 397 ID 398
ID
Sbjct: 786 ID 787
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 116/238 (48%)
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
D A LF +M P +V +T V+ N ++ L +M + G+ ++ +F ++
Sbjct: 586 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 645
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
+ C+ ++ A LL M+++G RP+ +L++GFC R A L SM+ G
Sbjct: 646 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 705
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
V Y+ +ING CKN+++ AL ++ M KGI+ D V YNTL L + A +
Sbjct: 706 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 765
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
L +M + + + + ID K ++EA L++ + ++ YN LI+G
Sbjct: 766 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 823
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 107/247 (43%), Gaps = 35/247 (14%)
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVT------------------------------- 217
GF ++ + +A L EM+ P++V
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 218 ----FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
F +++ C+ ++ A +L M+++G P+ + +L+ GFCL R+ A L
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
+ M G V Y+ LI+G CKN E+ AL L EM KG+ DVV YNTL L
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
+ A ++ +M + + D T+ ID K + EA EL++ + + + Y
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 394 NCLIDGL 400
N +I+GL
Sbjct: 285 NSIINGL 291
>gi|356497996|ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 600
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 131/391 (33%), Positives = 208/391 (53%), Gaps = 13/391 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
+ M+ M+P P V FN+LF +AK KHY T +SL K ++ G+ P ++T NI+INC C
Sbjct: 71 YHKMVTMKPFPC-VKDFNLLFSIVAKMKHYTTAISLIKHMSYIGVKPTVHTLNIVINCLC 129
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
++ GF VLG + + P+ VTF +++ GLC E + +A L+ G E + +
Sbjct: 130 RLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAIRFVDHLKDMGYESDSY 189
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
T + NGL + GH+ AL+ ++M N V +G V +A LF QM
Sbjct: 190 TCGAITNGLCKVGHSSAALSYLKKMEEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFSQM 249
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I PD+ TY +I G C + W EA LL MM +G+ P+V TFNVI K G +
Sbjct: 250 TGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMI 309
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
A + M+ +G+ + Y +++ C+ ++ A E+F M S GC + +Y+ L
Sbjct: 310 SRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSL 369
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I+G+C+ K + A+ GEM++ G+ P+VV ++TL + + + A +LF M + G
Sbjct: 370 IHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQ 429
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
+ T +DGL K ++ EA+ LFR L
Sbjct: 430 LPNLQTCAIILDGLFKCNFHSEAMSLFRELE 460
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 179/398 (44%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +FN + L + + L G D YT + N CK+G S
Sbjct: 151 PSIVTFNTIVNGLCVEGNVAQAIRFVDHLKDMGYESDSYTCGAITNGLCKVGHSSAALSY 210
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ + ++ ++ GLC + + EA LF+++ G +P++FTYN LI+GL
Sbjct: 211 LKKMEEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCN 270
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
A L M G F G + +AK +F M I DVVT
Sbjct: 271 FDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVT 330
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YTS+I C N +A + M+ +G PN+VT+ ++ C+ M++A L M+
Sbjct: 331 YTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMV 390
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ PN ++TL+ G C G+ AKELF+ M G + + +I+++G K
Sbjct: 391 NNGLDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHS 450
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+SL+ E+ +++IYN + + ++ A +LF + GV D TY I
Sbjct: 451 EAMSLFRELEKMNWDLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMI 510
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GLCK + +A +L + C + YN + GL
Sbjct: 511 KGLCKEGLLDDAEDLLMKMEENGCPPNECTYNVFVQGL 548
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 172/362 (47%), Gaps = 12/362 (3%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
L K H LS K++ D+ Y+ +++ CK G V + ++ P+
Sbjct: 198 LCKVGHSSAALSYLKKMEEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPD 257
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
T+ LI GLC R EAA L + G P+V T+N + ++TG A ++F
Sbjct: 258 LFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFS 317
Query: 147 EMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
M E V + + A E+F M + P++VTYTS+I G+C
Sbjct: 318 FMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETK 377
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ N+A L EM++ G+ PNVVT++ ++ +CK GK A L +M + G PN
Sbjct: 378 NMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCA 437
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
++DG + A LF +E M + Y+I+++G C + ++ AL L+ + SK
Sbjct: 438 IILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNIILDGMCSSGKLNDALELFSYLSSK 497
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+K DVV YN + L + ++ A L +M+ +G + TY F+ GL + I ++
Sbjct: 498 GVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENGCPPNECTYNVFVQGLLRRYQISKS 557
Query: 375 VE 376
+
Sbjct: 558 TK 559
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 144/299 (48%), Gaps = 14/299 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FN++ G K S+F + G+ D+ TY +I C + ++ V
Sbjct: 291 PDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEV 350
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ PN VT+TSLI G C + +A ++ G +PNV T++TLI G+ +
Sbjct: 351 FDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCK 410
Query: 135 TGHTIVALNLFEEMASGNGEFG--------VEG-----FVDKAKELFLQMKDENINPDVV 181
G + A LF M +G+ ++G F +A LF +++ N + +++
Sbjct: 411 AGKPVAAKELFLVMHK-HGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNWDLNII 469
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y ++ G C + N+A L + +GV+ +VVT+N+++ LCK G +D+A LL M
Sbjct: 470 IYNIILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKM 529
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+ G PN YN + G +++++ + + M+ G + LIN + NKE
Sbjct: 530 EENGCPPNECTYNVFVQGLLRRYQISKSTKYLMFMKDKGFQADATTTKFLINYFSANKE 588
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 103/236 (43%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
VD A + + +M P V + + + A L+ M GV+P V T N+
Sbjct: 64 VDVALDFYHKMVTMKPFPCVKDFNLLFSIVAKMKHYTTAISLIKHMSYIGVKPTVHTLNI 123
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ LC+ +L LM +IGV P+ +NT+++G C+ G V +A ++ MG
Sbjct: 124 VINCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAIRFVDHLKDMG 183
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
++ + NG CK ALS +M K DV Y+ + L + V A
Sbjct: 184 YESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKNCNLDVTAYSGVVDGLCKDGMVFEAL 243
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
LF +M G+ D +TY I GLC EA L + D++ +N +
Sbjct: 244 NLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVI 299
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%)
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
+D + +D A M+ + P +N L A L M +G
Sbjct: 55 LDSMRNAKSVDVALDFYHKMVTMKPFPCVKDFNLLFSIVAKMKHYTTAISLIKHMSYIGV 114
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
TV + +I+IN C+ S+ G M G++P +V +NT+ L V +A +
Sbjct: 115 KPTVHTLNIVINCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAIR 174
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D ++ G +D++T +GLCK + A+ + + C LD+ AY+ ++DGL
Sbjct: 175 FVDHLKDMGYESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKNCNLDVTAYSGVVDGL 233
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 220/434 (50%), Gaps = 49/434 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ + L K + D + + + G+ P+ TYN +++ +C G+
Sbjct: 232 PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+ VT+ SL+ LC R EA +F + G +P + TY TL+ G Y
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQG-YA 350
Query: 135 TGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDVV 181
T +V ++ ++ NG + +G VD+A +F +M+ + +NPD V
Sbjct: 351 TKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTV 410
Query: 182 TY-----------------------------------TSVIRGFCYANDWNEAKCLLIEM 206
TY S+I C + W++AK L++EM
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEM 470
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+D+G+ + + FN I+D CK G++ E+ +L DLM++IGV+P+ Y+TL+DG+CL G++
Sbjct: 471 LDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 530
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ A +L SM S+G +Y+ LINGYCK +E AL L+ EM S G+ PD++ YN +
Sbjct: 531 DEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNII 590
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
LF+ + A +L+ + G + TY + GLCKN+ EA+ +F+ L +
Sbjct: 591 LQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDL 650
Query: 387 ELDIRAYNCLIDGL 400
+L+ R +N +I L
Sbjct: 651 QLETRTFNIMIGAL 664
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 136/419 (32%), Positives = 206/419 (49%), Gaps = 26/419 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG---LFPDLYTYNILI 59
+FD +L R + N +A++ V S + R+ G + P+L TY ILI
Sbjct: 41 VFDELLR-RGRGASIYGLNCALADVARHSPAAAV-SRYNRMARAGADEVTPNLCTYGILI 98
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGC 118
C GR+ GF LG +++ F +A+ FT L+KGLCA+ R +A + ++ GC
Sbjct: 99 GSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGC 158
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE--------------FGVEGFVDKA 164
PNVF+YN L+ GL + AL L + M G+ F EG +DKA
Sbjct: 159 IPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKA 218
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
+ +M D I P+VVTY+S+I C A ++A +L M+ GV PN T+N I+
Sbjct: 219 YGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHG 278
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
C +G+ EA L M GV P+ YN+LMD C GR A+++F SM G
Sbjct: 279 YCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338
Query: 285 VFSYSILINGYCKNK---EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
+ +Y L+ GY E+ G L L M+ GI P+ +++ L + +V++A
Sbjct: 339 ITTYGTLLQGYATKGALVEMHGLLDL---MVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+F +M++ G+ DT TY T I LCK+ + +A+ F + + YN LI L
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 184/387 (47%), Gaps = 25/387 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG--LFPDLYTYNILINCFCKMGRVSHGF 72
P V S+NIL L L L + + G PD+ +Y +IN F K G + +
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+L PN VT++S+I LC + +A + T + G PN TYN++++G
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+G A+ GF+ K M + + PDVVTY S++ C
Sbjct: 280 CSSGQPKEAI----------------GFLKK-------MHSDGVEPDVVTYNSLMDYLCK 316
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
EA+ + M +G++P + T+ ++ G + E LLDLM++ G+ PN +V
Sbjct: 317 NGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 376
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
++ L+ + G+V++A +F M G +Y +I CK+ +E A+ + +M+
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
+ + P ++YN+L L + ++A +L EM G+ DT + + ID CK ++
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDG 399
E+ +LF + + + DI Y+ LIDG
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDG 523
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 200/433 (46%), Gaps = 47/433 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L KN +F + GL P++ TY L+ + G + +
Sbjct: 302 PDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 361
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++R+ PN F+ LI + ++ +A +F+K+R G P+ TY T+I L +
Sbjct: 362 LDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421
Query: 135 TGHTIVALNLFEEM-----ASGN-------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+G A+ FE+M + GN + DKAKEL L+M D I D +
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ S+I C E++ L M+ GV+P+++T++ ++D C GKMDEA++LL M+
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 541
Query: 243 QIGVRPNAFVYNTLMDGFC-----------------------------------LTGRVN 267
+G++P+ YNTL++G+C T R
Sbjct: 542 SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
AKEL+V + G + +Y+I+++G CKN + AL ++ + ++ + +N +
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 661
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
L ++ + + A LF + +G+ D TY + L + + E +LF ++ C
Sbjct: 662 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCT 721
Query: 388 LDIRAYNCLIDGL 400
+ R N ++ L
Sbjct: 722 ANSRMLNSIVRKL 734
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 161/399 (40%), Gaps = 49/399 (12%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F+IL AK D + +F ++ GL PD TY +I CK GRV +++
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436
Query: 80 RSCFTPNAVTFTSLIKGLC-----------------------------------AESRIM 104
+P + + SLI LC E R++
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG------------- 151
E+ LF + G +P++ TY+TLI+G G A L M S
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556
Query: 152 NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
NG + D A LF +M+ ++PD++TY +++G AK L + + + G
Sbjct: 557 NGYCKISRMED-ALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
Q + T+N+I+ LCKN DEA R+ + ++ +N ++ GR + AK+
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
LF ++ + G V +YS++ + +E L+ M G + + N++ L
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 735
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
+ + RA + + + T F+D L Y
Sbjct: 736 QRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSGGKY 774
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/387 (36%), Positives = 207/387 (53%), Gaps = 25/387 (6%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P V ++ G +N D V LF + GLF D TY ILIN CK +
Sbjct: 75 PDAVTVTTLVKGVWMENGIPDAV-QLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIK 133
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ ++ +C + T+ +I LC + EA +F+++ G P+V Y++L++GL
Sbjct: 134 LHEKMKGNC-KGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLC 192
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
R G AL F+EM G G I+ DV TY S+I G A
Sbjct: 193 RFGRLKEALEFFKEM-EGRG----------------------ISADVYTYNSLIHGLSRA 229
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
W E L M+D+G P+ TF +++D LCK GK+ EA ++L+LM G P+ Y
Sbjct: 230 GLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTY 289
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
NTLM+G CL G++ A +LF S+ G VFSY+ILINGYCK+++I+ A L+ EM
Sbjct: 290 NTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRP 349
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG+KP V YNTL L + +V A KLF EMQ G TY +DGLCKN ++ E
Sbjct: 350 KGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEE 409
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A++LF++++ + + +I ++ L+DG+
Sbjct: 410 AIDLFQSIKKTEHKPNIEVFSILLDGM 436
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/396 (29%), Positives = 208/396 (52%), Gaps = 17/396 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRL--NSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
++ IL L K + + L +++ N G D++TY ++I+ CK G + +
Sbjct: 114 TYGILINGLCKARKTGLAIKLHEKMKGNCKG---DVFTYGMIIDSLCKDGMTTEALDMFS 170
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ + P+ V ++SL+ GLC R+ EA F ++ G +V+TYN+LI+GL R G
Sbjct: 171 EMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAG 230
Query: 137 ---HTIVALNLFEEMASGNGEFGV---------EGFVDKAKELFLQMKDENINPDVVTYT 184
LNL + F EG V +A+++ M + PD++TY
Sbjct: 231 LWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYN 290
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+++ G C +A L + D+G++ NV ++N++++ CK+ K+DEA RL + M
Sbjct: 291 TLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPK 350
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G++P+ YNTL+ C +GRV A++LFV M++ G + +Y +L++G CKN +E A
Sbjct: 351 GLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEA 410
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
+ L+ + KP++ +++ L + ++E A+K FDE+ ++G+ DT Y I+G
Sbjct: 411 IDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILING 470
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LC + EAV+L + C D +N +I L
Sbjct: 471 LCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNL 506
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 173/352 (49%), Gaps = 12/352 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L L + L FK + G+ D+YTYN LI+ + G
Sbjct: 179 PDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWF 238
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ F+P+A TFT LI GLC E ++ EA + + G EP++ TYNTL+NGL
Sbjct: 239 LNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCL 298
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
G A LFE +A + V + +D+A LF +M+ + + P VT
Sbjct: 299 VGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVT 358
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I C + A+ L +EM G + T+ V++D LCKNG ++EA L +
Sbjct: 359 YNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIK 418
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ +PN V++ L+DG C G++ A + F + G +Y+ILING C +
Sbjct: 419 KTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLS 478
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
A+ L +M KG PD + +N + L + +++ A +L +EM+ + D
Sbjct: 479 EAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 530
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 130/263 (49%), Gaps = 12/263 (4%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
+++ + P + ++N L L + LF+ L G+ ++++YNILIN +CK
Sbjct: 276 LMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQ 335
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
++ F + + P+ VT+ +LI LC R+ A LF +++ G + TY
Sbjct: 336 KIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYC 395
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKDE 174
L++GL + GH A++LF+ + + +E G +++A + F ++
Sbjct: 396 VLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKN 455
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
+ PD + Y +I G C +EA LL +M ++G P+ +TFNVI+ L K ++ EA
Sbjct: 456 GLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEA 515
Query: 235 SRLLDLMIQIGVRPNAFVYNTLM 257
+LL+ M P+ V + L+
Sbjct: 516 IQLLEEMRNRNFSPDEAVTSMLL 538
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 14/216 (6%)
Query: 10 MRPS--PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
MRP P ++N L G L ++ T LF + + G F L TY +L++ CK G
Sbjct: 347 MRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGH 406
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ + I ++ PN F+ L+ G+C ++ EA F ++ G EP+ YN
Sbjct: 407 LEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNI 466
Query: 128 LINGLYRTGHTIVALNLFEEMAS-----GNGEFGV-------EGFVDKAKELFLQMKDEN 175
LINGL G A+ L +M + F V E + +A +L +M++ N
Sbjct: 467 LINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRN 526
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
+PD + ++ + W+ A L + +GV
Sbjct: 527 FSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKGV 562
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 220/434 (50%), Gaps = 49/434 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ + L K + D + + + G+ P+ TYN +++ +C G+
Sbjct: 232 PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+ VT+ SL+ LC R EA +F + G +P + TY TL+ G Y
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQG-YA 350
Query: 135 TGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDVV 181
T +V ++ ++ NG + +G VD+A +F +M+ + +NPD V
Sbjct: 351 TKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTV 410
Query: 182 TY-----------------------------------TSVIRGFCYANDWNEAKCLLIEM 206
TY S+I C + W++AK L++EM
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEM 470
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+D+G+ + + FN I+D CK G++ E+ +L DLM++IGV+P+ Y+TL+DG+CL G++
Sbjct: 471 LDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 530
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ A +L SM S+G +Y+ LINGYCK +E AL L+ EM S G+ PD++ YN +
Sbjct: 531 DEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNII 590
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
LF+ + A +L+ + G + TY + GLCKN+ EA+ +F+ L +
Sbjct: 591 LQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDL 650
Query: 387 ELDIRAYNCLIDGL 400
+L+ R +N +I L
Sbjct: 651 QLETRTFNIMIGAL 664
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 136/419 (32%), Positives = 206/419 (49%), Gaps = 26/419 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG---LFPDLYTYNILI 59
+FD +L R + N +A++ V S + R+ G + P+L TY ILI
Sbjct: 41 VFDELLR-RGRGASIYGLNCALADVARHSPAAAV-SRYNRMARAGADEVTPNLCTYGILI 98
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGC 118
C GR+ GF LG +++ F +A+ FT L+KGLCA+ R +A + ++ GC
Sbjct: 99 GSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGC 158
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE--------------FGVEGFVDKA 164
PNVF+YN L+ GL + AL L + M G+ F EG +DKA
Sbjct: 159 IPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKA 218
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
+ +M D I P+VVTY+S+I C A ++A +L M+ GV PN T+N I+
Sbjct: 219 YGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHG 278
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
C +G+ EA L M GV P+ YN+LMD C GR A+++F SM G
Sbjct: 279 YCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338
Query: 285 VFSYSILINGYCKNK---EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
+ +Y L+ GY E+ G L L M+ GI P+ +++ L + +V++A
Sbjct: 339 ITTYGTLLQGYATKGALVEMHGLLDL---MVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+F +M++ G+ DT TY T I LCK+ + +A+ F + + YN LI L
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 184/387 (47%), Gaps = 25/387 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG--LFPDLYTYNILINCFCKMGRVSHGF 72
P V S+NIL L L L + + G PD+ +Y +IN F K G + +
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+L PN VT++S+I LC + +A + T + G PN TYN++++G
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+G A+ GF+ K M + + PDVVTY S++ C
Sbjct: 280 CSSGQPKEAI----------------GFLKK-------MHSDGVEPDVVTYNSLMDYLCK 316
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
EA+ + M +G++P + T+ ++ G + E LLDLM++ G+ PN +V
Sbjct: 317 NGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 376
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
++ L+ + G+V++A +F M G +Y +I CK+ +E A+ + +M+
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
+ + P ++YN+L L + ++A +L EM G+ DT + + ID CK ++
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDG 399
E+ +LF + + + DI Y+ LIDG
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDG 523
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 200/433 (46%), Gaps = 47/433 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L KN +F + GL P++ TY L+ + G + +
Sbjct: 302 PDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 361
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++R+ PN F+ LI + ++ +A +F+K+R G P+ TY T+I L +
Sbjct: 362 LDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421
Query: 135 TGHTIVALNLFEEM-----ASGN-------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+G A+ FE+M + GN + DKAKEL L+M D I D +
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ S+I C E++ L M+ GV+P+++T++ ++D C GKMDEA++LL M+
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 541
Query: 243 QIGVRPNAFVYNTLMDGFC-----------------------------------LTGRVN 267
+G++P+ YNTL++G+C T R
Sbjct: 542 SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
AKEL+V + G + +Y+I+++G CKN + AL ++ + ++ + +N +
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 661
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
L ++ + + A LF + +G+ D TY + L + + E +LF ++ C
Sbjct: 662 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCT 721
Query: 388 LDIRAYNCLIDGL 400
+ R N ++ L
Sbjct: 722 ANSRMLNSIVRKL 734
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 161/399 (40%), Gaps = 49/399 (12%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F+IL AK D + +F ++ GL PD TY +I CK GRV +++
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436
Query: 80 RSCFTPNAVTFTSLIKGLC-----------------------------------AESRIM 104
+P + + SLI LC E R++
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG------------- 151
E+ LF + G +P++ TY+TLI+G G A L M S
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556
Query: 152 NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
NG + D A LF +M+ ++PD++TY +++G AK L + + + G
Sbjct: 557 NGYCKISRMED-ALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
Q + T+N+I+ LCKN DEA R+ + ++ +N ++ GR + AK+
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
LF ++ + G V +YS++ + +E L+ M G + + N++ L
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 735
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
+ + RA + + + T F+D L Y
Sbjct: 736 QRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSGGKY 774
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 132/396 (33%), Positives = 218/396 (55%), Gaps = 24/396 (6%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F ML +R P + F+ LF + + HY+TV+ L K + G+ D+++ +ILINCFC
Sbjct: 50 FRLML-LRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFC 108
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ RV G VL +IL+ P+ VTFT+L+ GLC E ++ + L+ + V G +PNV+
Sbjct: 109 HLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVY 168
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
TYN +IN L ++G AL GF+ QM+ P+VV Y
Sbjct: 169 TYNVIINSLSKSGKANEAL----------------GFLK-------QMEKVGCVPNVVNY 205
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
+++I G+C +EA+ + M+ +G PNV T+ +M+ CK +++EA +LLD ++
Sbjct: 206 STLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLR 265
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G+ P+ + T++ G C GR A++LF + + G T + +Y +L++G CK+ +E
Sbjct: 266 KGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEE 325
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A +L+ EM +KP++VIY L L + +++ +LF + +G+ + +TY +
Sbjct: 326 AFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVG 385
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
LCK I+EA +LFR + C D AYN +I G
Sbjct: 386 ALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQG 421
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 156/293 (53%), Gaps = 12/293 (4%)
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKEL 167
P + ++ L + + R GH + L +E+ E + VD +
Sbjct: 60 PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSV 119
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
++ + P +VT+T+++ G C ++ L +M+ +G+QPNV T+NVI++ L K
Sbjct: 120 LSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSK 179
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
+GK +EA L M ++G PN Y+TL+DG+CL G+++ A+ +F M S GCT V++
Sbjct: 180 SGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYT 239
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y+ L+NGYCK + IE A+ L E L KG+ PD+V + T+ L + A +LF +
Sbjct: 240 YTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYIC 299
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G + TY +DGLCK+ + EA LF+ ++ + ++ Y LID L
Sbjct: 300 AHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSL 352
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 121/256 (47%), Gaps = 12/256 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ L D S+F + S G P++YTY L+N +CK+ R+ +
Sbjct: 200 PNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQL 259
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L LR P+ VTFT++I GLC R + A LF + G PN+ TY L++GL +
Sbjct: 260 LDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCK 319
Query: 135 TGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKDENINPDVVT 182
G+ A LF+EM + + G + KELF ++ DE + P+V T
Sbjct: 320 HGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYT 379
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+++ C EA L +M + G P+ +NVI+ ++ A +L++ M+
Sbjct: 380 YTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMV 439
Query: 243 QIGVRPNAFVYNTLMD 258
G +A L D
Sbjct: 440 NRGFSADAATRALLND 455
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 220/434 (50%), Gaps = 49/434 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ + L K + D + + + G+ P+ TYN +++ +C G+
Sbjct: 232 PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+ VT+ SL+ LC R EA +F + G +P + TY TL+ G Y
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQG-YA 350
Query: 135 TGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDVV 181
T +V ++ ++ NG + +G VD+A +F +M+ + +NPD V
Sbjct: 351 TKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTV 410
Query: 182 TY-----------------------------------TSVIRGFCYANDWNEAKCLLIEM 206
TY S+I C + W++AK L++EM
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEM 470
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+D+G+ + + FN I+D CK G++ E+ +L DLM++IGV+P+ Y+TL+DG+CL G++
Sbjct: 471 LDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 530
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ A +L SM S+G +Y+ LINGYCK +E AL L+ EM S G+ PD++ YN +
Sbjct: 531 DEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNII 590
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
LF+ + A +L+ + G + TY + GLCKN+ EA+ +F+ L +
Sbjct: 591 LQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDL 650
Query: 387 ELDIRAYNCLIDGL 400
+L+ R +N +I L
Sbjct: 651 QLETRTFNIMIGAL 664
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/419 (31%), Positives = 206/419 (49%), Gaps = 26/419 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG---LFPDLYTYNILI 59
+FD +L R + N +A++ V S + R+ G + P+L TY IL+
Sbjct: 41 VFDELLR-RGRGASIYGLNCALADVARHSPAAAV-SRYNRMARAGADEVTPNLCTYGILM 98
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGC 118
C GR+ GF LG +++ F +A+ FT ++KGLCA+ R +A + ++ GC
Sbjct: 99 GSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGC 158
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE--------------FGVEGFVDKA 164
PNVF+YN L+ GL + AL L + M G+ F EG +DKA
Sbjct: 159 IPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKA 218
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
+ +M D I P+VVTY+S+I C A ++A +L M+ GV PN T+N I+
Sbjct: 219 YGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHG 278
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
C +G+ EA L M GV P+ YN+LMD C GR A+++F SM G
Sbjct: 279 YCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338
Query: 285 VFSYSILINGYCKNK---EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
+ +Y L+ GY E+ G L L M+ GI P+ +++ L + +V++A
Sbjct: 339 ITTYGTLLQGYATKGALVEMHGLLDL---MVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+F +M++ G+ DT TY T I LCK+ + +A+ F + + YN LI L
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 185/387 (47%), Gaps = 25/387 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG--LFPDLYTYNILINCFCKMGRVSHGF 72
P V S+NIL L + L L + + G PD+ +Y +IN F K G + +
Sbjct: 160 PNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+L PN VT++S+I LC + +A + T + G PN TYN++++G
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+G A+ GF+ K M + + PDVVTY S++ C
Sbjct: 280 CSSGQPKEAI----------------GFLKK-------MHSDGVEPDVVTYNSLMDYLCK 316
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
EA+ + M +G++P + T+ ++ G + E LLDLM++ G+ PN +V
Sbjct: 317 NGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 376
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
++ L+ + G+V++A +F M G +Y +I CK+ +E A+ + +M+
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
+ + P ++YN+L L + ++A +L EM G+ DT + + ID CK ++
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDG 399
E+ +LF + + + DI Y+ LIDG
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDG 523
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 200/433 (46%), Gaps = 47/433 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L KN +F + GL P++ TY L+ + G + +
Sbjct: 302 PDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 361
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++R+ PN F+ LI + ++ +A +F+K+R G P+ TY T+I L +
Sbjct: 362 LDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421
Query: 135 TGHTIVALNLFEEM-----ASGN-------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+G A+ FE+M + GN + DKAKEL L+M D I D +
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ S+I C E++ L M+ GV+P+++T++ ++D C GKMDEA++LL M+
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 541
Query: 243 QIGVRPNAFVYNTLMDGFC-----------------------------------LTGRVN 267
+G++P+ YNTL++G+C T R
Sbjct: 542 SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
AKEL+V + G + +Y+I+++G CKN + AL ++ + ++ + +N +
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 661
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
L ++ + + A LF + +G+ D TY + L + + E +LF ++ C
Sbjct: 662 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCT 721
Query: 388 LDIRAYNCLIDGL 400
+ R N ++ L
Sbjct: 722 ANSRMLNSIVRKL 734
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 161/399 (40%), Gaps = 49/399 (12%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F+IL AK D + +F ++ GL PD TY +I CK GRV +++
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436
Query: 80 RSCFTPNAVTFTSLIKGLC-----------------------------------AESRIM 104
+P + + SLI LC E R++
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG------------- 151
E+ LF + G +P++ TY+TLI+G G A L M S
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556
Query: 152 NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
NG + D A LF +M+ ++PD++TY +++G AK L + + + G
Sbjct: 557 NGYCKISRMED-ALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
Q + T+N+I+ LCKN DEA R+ + ++ +N ++ GR + AK+
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
LF ++ + G V +YS++ + +E L+ M G + + N++ L
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 735
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
+ + RA + + + T F+D L Y
Sbjct: 736 QRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSGGKY 774
>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
Length = 833
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 134/410 (32%), Positives = 216/410 (52%), Gaps = 25/410 (6%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP V S+N + + D +LF ++ G+ PD+ TYN +I+ CK V
Sbjct: 301 PPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKA 360
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
V ++L P+ T+ LI G + + E L ++ EP+ F Y L++ L
Sbjct: 361 VFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLC 420
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIR----- 188
+ G A N+F+ + + +D+A +F +M+ + ++P+VV Y ++I
Sbjct: 421 KNGRCTEARNIFDSVIRKG--IKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKL 478
Query: 189 ------------------GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
G C W +A+ L+ EM+DQG++ +VV FN +M +LC+ G+
Sbjct: 479 GRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGR 538
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ EA RL++LM+++GVRP+ YNTL+DG CLTGR + A +L M S+G F+Y+
Sbjct: 539 VMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNT 598
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L++GYCK + I+ A SL EML G PDVV YNT+ LF+ + A +L+ M
Sbjct: 599 LLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSR 658
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D +TY ++GLCKN+ + EA ++F++L +L I +N +I L
Sbjct: 659 TQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGAL 708
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 157/466 (33%), Positives = 219/466 (46%), Gaps = 70/466 (15%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVL------SLFKRLN---STGLFPDLY 53
+FD +L P V +FN L +++ + L SLF R+ S + PD
Sbjct: 138 LFDLLLP-HARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECSDKVAPDRC 196
Query: 54 TYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA-ALFTK 112
TY+ILI CFC+MGR+ HGF V G IL++ + N + F L+KGLC R+ EA L +
Sbjct: 197 TYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWR 256
Query: 113 LRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG---------------EFGV 157
+ FGC PNV +YNTL+ G AL L MA G F
Sbjct: 257 MPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFR 316
Query: 158 EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
EG VDKA LFLQM D I PDVVTY +VI G C A + AK + +M+D+GV+P+ T
Sbjct: 317 EGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGT 376
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS-- 275
+N ++ GK E RLL+ M + P+ F+Y L+D C GR A+ +F S
Sbjct: 377 YNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVI 436
Query: 276 -------------------MESMGCTHTVFSYSILINGYCKNKEIEGAL--------SLY 308
M G + V +Y LI+ CK ++ A+ +Y
Sbjct: 437 RKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVY 496
Query: 309 G---------------EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
G EML +GI+ DVV++NTL L +V A +L + M R GV
Sbjct: 497 GLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRP 556
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
D +Y T +DG C EA +L + + + + YN L+ G
Sbjct: 557 DVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHG 602
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 119/398 (29%), Positives = 200/398 (50%), Gaps = 22/398 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F ML+ + P ++N L + V+ L + +++ L PD + Y +L++
Sbjct: 361 VFQQMLD-KGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYL 419
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK GR + + ++R P+A+ I EA +F K+R G PNV
Sbjct: 420 CKNGRCTEARNIFDSVIRKGIKPDAM--------------IDEAVCIFDKMRQQGLSPNV 465
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG---VEGFVDKAKELFLQMKDENINPD 179
Y LI+ L + G A+ F +M N +G VE + +KA+EL +M D+ I D
Sbjct: 466 VNYGALIDALCKLGRVDDAILKFNQMI--NEVYGLCTVEKW-EKAEELVFEMLDQGIRLD 522
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
VV + +++ C EA+ L+ M+ GV+P+V+++N ++D C G+ DEA++LLD
Sbjct: 523 VVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLD 582
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
+M+ IG++PN F YNTL+ G+C R++ A L M G T V +Y+ +++G +
Sbjct: 583 VMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTG 642
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
A LY M++ + D+ YN + L + + V+ AFK+F + G+ T+
Sbjct: 643 RFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFN 702
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
I L K +A++LF T+ D+ Y CLI
Sbjct: 703 IMIGALLKGGKKEDAMDLFATISAYGLVPDVETY-CLI 739
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 111/231 (48%), Gaps = 4/231 (1%)
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
+ + PD TY+ +I FC + ++ G + N + FN ++ LC ++DE
Sbjct: 189 DKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDE 248
Query: 234 ASR-LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM---ESMGCTHTVFSYS 289
A+ LL M + G PN YNTL+ GFC R A EL M + + C V SY+
Sbjct: 249 ATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYN 308
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
+ING+ + +++ A +L+ +M+ +GI PDVV YNT+ L + V+RA +F +M
Sbjct: 309 TVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDK 368
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GV TY I G E V L + E D Y L+D L
Sbjct: 369 GVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYL 419
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 140/303 (46%), Gaps = 12/303 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V FN L L + L + + G+ PD+ +YN L++ C GR +L
Sbjct: 523 VVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLD 582
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ PN T+ +L+ G C RI +A +L ++ + G P+V TYNT+++GL++TG
Sbjct: 583 VMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTG 642
Query: 137 HTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYT 184
A L+ M + ++ + + VD+A ++F + + + ++T+
Sbjct: 643 RFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFN 702
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+I +A L + G+ P+V T+ +I + L K G ++E L M +
Sbjct: 703 IMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEEN 762
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G PN+ + N L+ F G ++RA ++ + + S+LI+ Y + + + A
Sbjct: 763 GTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLISLYSRGEYQQLA 822
Query: 305 LSL 307
SL
Sbjct: 823 KSL 825
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 93/222 (41%), Gaps = 24/222 (10%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ + ML P+P V ++N + L + + L+ + ++ D+YTYNI++N
Sbjct: 613 YSLLREMLMNGPTPD-VVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILN 671
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK V F + + + +TF +I L + +A LF + +G P
Sbjct: 672 GLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVP 731
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
+V TY ++A NL + EG +++ LF M++ P+
Sbjct: 732 DVETY------------CLIAENLIK-----------EGSLEELGVLFSAMEENGTAPNS 768
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
+++R F + D + A L ++ ++ T ++++
Sbjct: 769 RMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLI 810
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/410 (31%), Positives = 219/410 (53%), Gaps = 13/410 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F +M++ P ++ G L+ K + V+ + + +++ GL PD Y Y +L++
Sbjct: 224 VFQHMIDKGVRPNNHTYTCLIHGYLSIGK-WKEVVQMLQEMSTHGLQPDCYIYAVLLDYL 282
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK GR + + ++R PN + L+ G E + E + + G P+
Sbjct: 283 CKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDH 342
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQ 170
+N + + A+++F++M + G VD A F Q
Sbjct: 343 HIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQ 402
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M DE + PD+ ++S++ G C + W +A+ L E++DQG++ + V FN +M LC+ G+
Sbjct: 403 MIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGR 462
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ EA RL+DLM+++GVRP+ YNTL+DG CLTGR++ A +L + S+G +Y+
Sbjct: 463 VMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNT 522
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L++GYCK + I+ A SL+ EML KG+ PDVV YNT+ LF+ + A +L+ M
Sbjct: 523 LLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSR 582
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +TY I+GLCKN+++ EA ++F +L +LDI N +I L
Sbjct: 583 TQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGAL 632
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 222/455 (48%), Gaps = 59/455 (12%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNK---HYDTVLSLFKRLN---STGLFPDLYTYN 56
+FD ML P V +FN L +++ + + V+SLF R+ S + P +TY
Sbjct: 38 LFDEMLT-HARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPSSFTYT 96
Query: 57 ILINCFCKMGRVSHGFVVLGRILRSCFTPN-AVTFTSLIKGLCAESRIMEAA-ALFTKLR 114
ILI CFC+MGR+ HGF G IL++ + N V F+ L+KGLC R+ EA L ++
Sbjct: 97 ILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILLRRMP 156
Query: 115 VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS-GNGEFG---------VEGF---- 160
FGC P+VF+Y+ L+ G AL L MA G+G ++G
Sbjct: 157 EFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQ 216
Query: 161 -VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 219
VD+AK +F M D+ + P+ TYT +I G+ W E +L EM G+QP+ +
Sbjct: 217 MVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYA 276
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR-------------- 265
V++D LCKNG+ EA + D +I+ G++PN +Y L+ G+ G
Sbjct: 277 VLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGN 336
Query: 266 ---------------------VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
++ A +F M + + +Y LI+ CK ++ A
Sbjct: 337 GVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDA 396
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
+ + +M+ +G+ PD+ ++++L L + + E+A +LF E+ G+ DT + T +
Sbjct: 397 VLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCN 456
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
LC+ ++EA L + + D+ +YN L+DG
Sbjct: 457 LCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDG 491
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 186/386 (48%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P FNI+F AK D + +F ++ L P++ TY LI+ CK+GRV +
Sbjct: 340 PDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLK 399
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ TP+ F+SL+ GLC + +A LF ++ G + +NTL+ L R
Sbjct: 400 FNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCR 459
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
EG V +A+ L M + PDV++Y +++ G C
Sbjct: 460 -----------------------EGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTG 496
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+EA LL ++ G++P+ VT+N ++ CK ++D+A L M+ G+ P+ YN
Sbjct: 497 RIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYN 556
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
T++ G TGR + AKEL++SM + +++Y+I+ING CKN ++ A ++ + SK
Sbjct: 557 TILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSK 616
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
++ D+ N + L + + E A LF + G+ D TY + L K + E
Sbjct: 617 DLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEEL 676
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
ELF + + R N L+ L
Sbjct: 677 DELFSAMEENGTAPNSRMLNALVRWL 702
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 139/300 (46%), Gaps = 12/300 (4%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FN L L + L + G+ PD+ +YN L++ C GR+ +L I+
Sbjct: 450 FNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIV 509
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
P+ VT+ +L+ G C RI +A +LF ++ + G P+V TYNT+++GL++TG
Sbjct: 510 SIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFS 569
Query: 140 VALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVI 187
A L+ M + + + FVD+A ++F + +++ D+ T +I
Sbjct: 570 EAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMI 629
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
+A L + G+ P+V T+ +I + L K G ++E L M + G
Sbjct: 630 GALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTA 689
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
PN+ + N L+ G +NRA ++ + + S+LI+ Y + + + A SL
Sbjct: 690 PNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLISIYSRGEYQQLAKSL 749
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 139/445 (31%), Positives = 223/445 (50%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ M+ R P + ++N + L K + D ++ +++ G+ PD +TYN LI +
Sbjct: 238 LFNEMVQ-RGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGY 296
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
G+ V ++ P+ VT SL+ LC +I +A +F + + G + ++
Sbjct: 297 SSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDI 356
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
F+Y ++NG G + LF M S + G +D+A +F +
Sbjct: 357 FSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNE 416
Query: 171 MKDENINPDVVTYTSVI-----------------------------------RGFCYAND 195
M+++ + PDVVTY++VI +GFC D
Sbjct: 417 MREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGD 476
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
+AK L+++MM++G++P++ FN I++ LCK G++ +A + D I IG+ PN VYNT
Sbjct: 477 LLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNT 536
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
LMDG+CL G++ A +F M S G V Y L+NGYCK I+ LSL+ E+L KG
Sbjct: 537 LMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKG 596
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
IKP +YN + LF+ + A F EM G+A D +TY + GL KNS EA+
Sbjct: 597 IKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAI 656
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
LF+ L + ++DI N +I G+
Sbjct: 657 LLFKELHAMNVKIDITTLNIMIAGM 681
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 187/383 (48%), Gaps = 19/383 (4%)
Query: 36 VLSLFKRLNSTG----LFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 91
++LF R++ L P L+TY IL++C + R G++L++ + + +
Sbjct: 88 AVALFNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMIS 147
Query: 92 SLIKGLCAESRIMEA-AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS 150
+L++GLC R EA L ++ GC P+VF+Y ++ L + A L MA
Sbjct: 148 NLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAE 207
Query: 151 GNG--------------EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
G F EG V+KA +LF +M I+PD+ TY V+ C A
Sbjct: 208 GGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAM 267
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
++A+ +L +M+D+GV P+ T+N ++ G+ EA R+ M G+ P+ N+L
Sbjct: 268 DKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSL 327
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
M C G++ A+++F SM G +FSY I++NGY + L+ MLS GI
Sbjct: 328 MASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGI 387
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
PD I+N L + ++RA +F+EM+ GV D TY T I LC+ + +AVE
Sbjct: 388 APDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVE 447
Query: 377 LFRTLRILKCELDIRAYNCLIDG 399
F + I Y+ LI G
Sbjct: 448 KFNQMIDQGVAPSISTYHFLIQG 470
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 195/401 (48%), Gaps = 15/401 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF-V 73
P + ++ IL C + L+ F ++ TGL D + L+ C+ R + +
Sbjct: 106 PTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDI 165
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG--CEPNVFTYNTLING 131
+L R+ P+ ++ ++K LC++ + +A L + G C PN YNT+I+G
Sbjct: 166 LLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDG 225
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPD 179
++ G A +LF EM + + +DKA+ + QM D+ + PD
Sbjct: 226 FFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPD 285
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
TY S+I G+ W EA + +M QG+ P+VVT N +M LCK+GK+ +A + D
Sbjct: 286 NWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFD 345
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M G + + F Y +++G+ G + ELF M S G +++LI Y K
Sbjct: 346 SMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCG 405
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++ A ++ EM +G++PDVV Y+T+ L I +++ A + F++M GVA TY
Sbjct: 406 MLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYH 465
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I G C + +++A +L + DI +N +I+ L
Sbjct: 466 FLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNL 506
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 181/385 (47%), Gaps = 24/385 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ ML+ +P FN+L AK D +F + G+ PD+ TY+ +I
Sbjct: 378 LFNLMLSDGIAPDSHI-FNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAAL 436
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C++G++ +++ P+ T+ LI+G C +++A L ++ G P++
Sbjct: 437 CRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDI 496
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+N +IN L + G + A N+F+ S ++P+V+
Sbjct: 497 GCFNFIINNLCKLGRVMDAQNIFDFTIS-----------------------IGLHPNVMV 533
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++ G+C A + M+ G+QPNVV + +++ CK G++DE L ++
Sbjct: 534 YNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREIL 593
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G++P+ +YN ++ G GR AK F M G ++YSI++ G KN +
Sbjct: 594 HKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSD 653
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ L+ E+ + +K D+ N + +F+I +VE A LF + R G+ TY +
Sbjct: 654 EAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMM 713
Query: 363 DGLCKNSYIVEAVELFRTLRILKCE 387
L K + EA ++F ++ CE
Sbjct: 714 TNLIKEGLVEEADDMFSSMENAGCE 738
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 135/403 (33%), Positives = 211/403 (52%), Gaps = 12/403 (2%)
Query: 10 MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS 69
R P V ++ IL L K+ + + + G P++ TYN LIN FCK+G +
Sbjct: 229 QRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMD 288
Query: 70 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
V+ ++L + +P+ T+ LI G C + R + A L ++ +GCEPN TYNTL+
Sbjct: 289 EAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLM 348
Query: 130 NGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENIN 177
+ L ++G I A NL + M + + F G +D A ELF M D
Sbjct: 349 DSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCL 408
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
PD+ TY +I G C AN ++A+ LL M + G P+VVT+N I+ LCK ++DEA +
Sbjct: 409 PDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEV 468
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
+++ G + +TL+DG C + R++ A++L ME G V +Y+ILI+G+CK
Sbjct: 469 YEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCK 528
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+++ +L+ + EML KG P V+ Y+ + L + +V L M GV D
Sbjct: 529 ADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIV 588
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Y + IDGLCK+ EA EL++ ++ C + YN L+D L
Sbjct: 589 YTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKL 631
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 196/385 (50%), Gaps = 24/385 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ L K + + L + G+ P YN +I C GRV V
Sbjct: 165 PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 224
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R+C P+ +T+T L+ LC +RI +A+ + + GC PNV TYNTLING +
Sbjct: 225 YRDMQRNC-APSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCK 283
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G+ +D+A LF QM + + +PDV TY +I G+C
Sbjct: 284 LGN-----------------------MDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQE 320
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ LL EM+ G +PN +T+N +MD L K+GK +A L +M++ +P+ F +N
Sbjct: 321 RPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFN 380
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
++D FC G+++ A ELF M GC +++Y+I+I+G C+ I+ A L M
Sbjct: 381 LMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEA 440
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G PDVV YN++ L + QV+ A+++++ ++ G D T T IDGLCK+ + +A
Sbjct: 441 GCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDA 500
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+L R + D+ AY LI G
Sbjct: 501 EKLLREMERNGSAPDVVAYTILIHG 525
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 198/372 (53%), Gaps = 23/372 (6%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ R P +FN++ K D LF+ + G PD+YTYNI+I+ C+
Sbjct: 366 MMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRAN 425
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
R+ +L R+ + P+ VT+ S++ GLC S++ EA ++ LR G +V T +
Sbjct: 426 RIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCS 485
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
TLI+GL ++ +D A++L +M+ PDVV YT +
Sbjct: 486 TLIDGLCKSRR-----------------------LDDAEKLLREMERNGSAPDVVAYTIL 522
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I GFC A+ +++ EM+D+G P V+T+++++D+LCK+ ++ + LL M++ GV
Sbjct: 523 IHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 582
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+A VY +++DG C + + A EL+ M+ GC TV +Y++L++ CK ++ A+
Sbjct: 583 TPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIH 642
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L M S G PD V YN++F ++ + ++AF+LF M+ G + + Y + L
Sbjct: 643 LLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLV 702
Query: 367 KNSYIVEAVELF 378
+ +A+E++
Sbjct: 703 AEEKMDQAMEIW 714
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 153/324 (47%), Gaps = 13/324 (4%)
Query: 89 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM 148
T L+ + + EA LF R C P+ TY+TLING + A L +EM
Sbjct: 134 TCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEM 193
Query: 149 -----ASGNGEFGV-------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
N + G VD A + M+ N P V+TYT ++ C +
Sbjct: 194 EKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RNCAPSVITYTILVDALCKSARI 252
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
++A +L +M++ G PNVVT+N +++ CK G MDEA L + M++ P+ F YN L
Sbjct: 253 SDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNIL 312
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG+C R +L M GC +Y+ L++ K+ + A +L ML +
Sbjct: 313 IDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDC 372
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
KP +N + + ++ Q++ A++LF M G D +TY I G C+ + I +A +
Sbjct: 373 KPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQ 432
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
L + C D+ YN ++ GL
Sbjct: 433 LLERMTEAGCPPDVVTYNSIVSGL 456
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 2/170 (1%)
Query: 231 MDEASRLLDLMI-QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+D+A + D Q G + + F N L+ F + A +LF + C+ +YS
Sbjct: 112 LDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYS 171
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
LING+CK ++ + A L EM +GI P +YNT+ L + +V+ A + +MQR+
Sbjct: 172 TLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRN 231
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
A TY +D LCK++ I +A + + C ++ YN LI+G
Sbjct: 232 -CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLING 280
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 130/410 (31%), Positives = 224/410 (54%), Gaps = 13/410 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F +M++ P ++ G L+ K + V+ + + +++ GL PD Y +L++
Sbjct: 224 VFQHMIDKGVRPNNHTYTCLIHGYLSTGK-WKEVVQMLQEMSTHGLQPDCVIYAVLLDYL 282
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK GR + + ++R P+ + L+ G E + E + + G P+
Sbjct: 283 CKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDH 342
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEM-----ASGNGEFGVE-------GFVDKAKELFLQ 170
+N + N + A+++F++M + G +G G VD A F Q
Sbjct: 343 HIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQ 402
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M +E + PD+ ++S++ G C + W +A+ L E++DQG++ N FN++M LC+ G+
Sbjct: 403 MINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGR 462
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ EA RL+DLM+++ VRP+ YNTL+DG CLTGR++ A +L M S+G F+Y+
Sbjct: 463 VMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNT 522
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L++GYCK + I+ A SL+ EML KG+ P VV YNT+ LF+I + A +L+ M +
Sbjct: 523 LLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNR 582
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D +TY ++GLC+N+++ EA ++F++L +LDI N +I L
Sbjct: 583 RKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGAL 632
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 220/455 (48%), Gaps = 59/455 (12%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNK---HYDTVLSLFKRLN---STGLFPDLYTYN 56
+FD ML P V +FN L +++ + + V+SLF R+ S + P TY
Sbjct: 38 LFDEMLTY-ARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPSSCTYT 96
Query: 57 ILINCFCKMGRVSHGFVVLGRILRSCFT-PNAVTFTSLIKGLCAESRIMEAA-ALFTKLR 114
ILI CFC+MGR+ HGF G IL++ ++ N V F L+KGLC R+ EA L ++
Sbjct: 97 ILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDILLRRMP 156
Query: 115 VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS-GNGEFG---------VEGF---- 160
FGC NV +YN L+ GL AL L MA G+G ++G
Sbjct: 157 EFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQ 216
Query: 161 -VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 219
VD+AK +F M D+ + P+ TYT +I G+ W E +L EM G+QP+ V +
Sbjct: 217 MVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYA 276
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR-------------- 265
V++D LCKNG+ EA + D +I+ G++P+ +Y L+ G+ G
Sbjct: 277 VLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRN 336
Query: 266 ---------------------VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
++ A +F M + V +Y LI+ CK ++ A
Sbjct: 337 GVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDA 396
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
+ + +M+++G+ PD+ ++++L L + + E+A KLF E+ G+ + + +
Sbjct: 397 VLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCN 456
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
LC+ ++EA L + + D+ +YN L+DG
Sbjct: 457 LCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDG 491
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 166/403 (41%), Gaps = 47/403 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P FNI+F AK D + +F ++ L P + Y LI+ CK+GRV +
Sbjct: 340 PDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLK 399
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCA----------------------------------- 99
+++ TP+ F+SL+ GLC
Sbjct: 400 FNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCR 459
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS---GNGEFG 156
E R+MEA L + P+V +YNTL++G TG A L + M S EF
Sbjct: 460 EGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFT 519
Query: 157 ----VEGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
+ G+ +D A LF +M + + P VVTY +++ G + EAK L + M+
Sbjct: 520 YNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMI 579
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+ + ++ T+ +I++ LC+N +DEA ++ + ++ + F N ++ GR
Sbjct: 580 NNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKE 639
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A +LF ++ + G V +Y ++ K +E L+ M G P+ + N L
Sbjct: 640 DAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALV 699
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
L + RA ++ + + T I + Y
Sbjct: 700 RWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLISIYSRAEY 742
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 135/300 (45%), Gaps = 12/300 (4%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FNIL L + L + + PD+ +YN L++ C GR+ +L ++
Sbjct: 450 FNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMV 509
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
P+ T+ +L+ G C RI +A +LF ++ + G P V TYNT+++GL++ G
Sbjct: 510 SIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFC 569
Query: 140 VALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVI 187
A L+ M + + + FVD+A ++F + +++ D+ T +I
Sbjct: 570 EAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMI 629
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
+A L + G+ P+V T+ +I + L K G ++E L M + G
Sbjct: 630 GALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTA 689
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
PN+ + N L+ G + RA ++ + + S+LI+ Y + + + A SL
Sbjct: 690 PNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLISIYSRAEYQQLAKSL 749
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 131/430 (30%), Positives = 219/430 (50%), Gaps = 47/430 (10%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++ I+ L K + F ++ G P+ +TYN+LIN FCK+ +V +++L
Sbjct: 126 VITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLK 185
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR-- 134
+ S PN VT++++I G C ++++ A LF ++ GC PN+ TYNTL++GL R
Sbjct: 186 EMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNG 245
Query: 135 ---------------------------------TGHTIVALNLFEEMASGNGEFGV---- 157
TG +AL +FE+ ++G+ V
Sbjct: 246 LMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYS 305
Query: 158 --------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
G +D+A +LF +M++ + PDVVT+T+++ G C + EA+ +L M D+
Sbjct: 306 TLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDR 365
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
PNV+T++ ++D LCK G++ +A + MI G+ PN YN+L+ GFC+T V+ A
Sbjct: 366 NCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSA 425
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
L M + GC + +Y+ LI+G CK A L+G+M +K PDV+ Y+ L
Sbjct: 426 LLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGG 485
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
++ +++ A LFD+M + V D T+ T ++G C + +A L + C D
Sbjct: 486 FCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPD 545
Query: 390 IRAYNCLIDG 399
+ Y L+DG
Sbjct: 546 VYTYTSLVDG 555
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 131/400 (32%), Positives = 204/400 (51%), Gaps = 13/400 (3%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP V +++ L L K D LF+++ PD+ T+ L++ CK R+
Sbjct: 298 PPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQ 357
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
VL + TPN +T++SLI GLC ++ +A +F ++ V G EPNV TYN+LI+G
Sbjct: 358 VLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFC 417
Query: 134 RTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
T AL L EEM + G +A LF MK + NPDV+
Sbjct: 418 MTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVI 477
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY+ +I GFC + A+ L +M+ Q V P+VVTF+ +++ C G +D+A RLL+ M
Sbjct: 478 TYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEM 537
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ P+ + Y +L+DGFC GR+ A+ + M GC V +Y+ LI+ +C+ +
Sbjct: 538 VASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKP 597
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD-GVAADTWTYRT 360
A L EM+ G++P+V+ Y +L +E A K+ + ++RD AD + YR
Sbjct: 598 TVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRV 657
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+DGLC+ + A+EL ++ Y LI GL
Sbjct: 658 MMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGL 697
Score = 227 bits (579), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 124/397 (31%), Positives = 204/397 (51%), Gaps = 12/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ + + DT LF+++ G P+L TYN L++ C+ G + + +
Sbjct: 194 PNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYEL 253
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P+ ++ +L+ GLC +I A +F C P+V Y+TLI GL +
Sbjct: 254 LDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCK 313
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
G A LFE+M + E V F + +A+++ M+D N P+V+T
Sbjct: 314 AGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVIT 373
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+S+I G C +A+ + M+ +G++PNVVT+N ++ C +D A L++ M
Sbjct: 374 YSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMT 433
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G P+ YNTL+DG C TGR A LF M++ C V +YS LI G+CK + I+
Sbjct: 434 ATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERID 493
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A +L+ +ML + + PDVV ++TL V+ A +L +EM + D +TY + +
Sbjct: 494 MARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLV 553
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
DG CK +VEA + + + C+ ++ Y LID
Sbjct: 554 DGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDA 590
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 205/434 (47%), Gaps = 48/434 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N L L +N D L + GL PD ++Y+ L+ CK G++ V
Sbjct: 229 PNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKV 288
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
P+ V +++LI GLC R+ EA LF K+R CEP+V T+ L++GL +
Sbjct: 289 FEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCK 348
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
A + E M N V G V A+E+F +M I P+VVT
Sbjct: 349 GDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVT 408
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL---- 238
Y S+I GFC N + A L+ EM G P+++T+N ++D LCK G+ EA+RL
Sbjct: 409 YNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMK 468
Query: 239 -------------------------------DLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
D M++ V P+ ++TL++G+C G V+
Sbjct: 469 AKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVD 528
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A+ L M + C+ V++Y+ L++G+CK + A + M +G +P+VV Y L
Sbjct: 529 DAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALI 588
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL-RILKC 386
+ A++L +EM +GV + TYR+ I G C + EA ++ L R C
Sbjct: 589 DAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENC 648
Query: 387 ELDIRAYNCLIDGL 400
+ D+ AY ++DGL
Sbjct: 649 KADMFAYRVMMDGL 662
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 202/395 (51%), Gaps = 15/395 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++N LF L + + D + K G+ P+++TY ++I CK G + +L
Sbjct: 24 VYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELLE 83
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ S P+A + +I LC +A F R CE NV T+ +I+GL +
Sbjct: 84 EMRESGPVPDAAIYNFVIHALCKARNTAKALDYF---RSMECEKNVITWTIMIDGLCKAN 140
Query: 137 HTIVALNLFEEMASGN---GEFG----VEGF-----VDKAKELFLQMKDENINPDVVTYT 184
A F +M E+ + GF V +A L +MK+ + P+VVTY+
Sbjct: 141 RLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYS 200
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+VI GFC + A L +M++ G PN+VT+N ++ LC+NG MDEA LLD M +
Sbjct: 201 TVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRER 260
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G++P+ F Y+TLM G C TG+++ A ++F + C V +YS LI G CK ++ A
Sbjct: 261 GLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEA 320
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L+ +M +PDVV + L L + +++ A ++ + M+ + TY + IDG
Sbjct: 321 CKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDG 380
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
LCK + +A E+F+ + + E ++ YN LI G
Sbjct: 381 LCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHG 415
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 127/421 (30%), Positives = 198/421 (47%), Gaps = 61/421 (14%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ ++ L K+ D L + + +G PD YN +I+ CK +
Sbjct: 57 PNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDY 116
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ C N +T+T +I GLC +R+ EA F K++ G PN +TYN LING +
Sbjct: 117 FRSM--EC-EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCK 173
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
V +A L +MK+ + P+VVTY++VI GFC
Sbjct: 174 VHK-----------------------VHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQT 210
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ A L +M++ G PN+VT+N ++ LC+NG MDEA LLD M + G++P+ F Y+
Sbjct: 211 KVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYD 270
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TLM G C TG+++ A ++F + C V +YS LI G CK ++ A L+ +M
Sbjct: 271 TLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMREN 330
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
+PDVV + L L + +++ A ++ + M+ + TY + IDGLCK + +A
Sbjct: 331 SCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDA 390
Query: 375 VELFRTLRI-----------------------------------LKCELDIRAYNCLIDG 399
E+F+ + + C DI YN LIDG
Sbjct: 391 QEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDG 450
Query: 400 L 400
L
Sbjct: 451 L 451
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 175/349 (50%), Gaps = 13/349 (3%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V +++ L L K +FKR+ G+ P++ TYN LI+ FC V
Sbjct: 365 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 424
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+++ + + P+ +T+ +LI GLC R EA LF ++ C P+V TY+ LI
Sbjct: 425 ALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIG 484
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINP 178
G + +A LF++M V G VD A+ L +M + +P
Sbjct: 485 GFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSP 544
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
DV TYTS++ GFC EA+ +L M +G QPNVVT+ ++D C+ GK A RLL
Sbjct: 545 DVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLL 604
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME-SMGCTHTVFSYSILINGYCK 297
+ M+ GV+PN Y +L+ GFC TG + A+++ +E C +F+Y ++++G C+
Sbjct: 605 EEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCR 664
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+ AL L + G P IY L L + ++ +A ++ +EM
Sbjct: 665 TGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEM 713
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 119/229 (51%), Gaps = 3/229 (1%)
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
K + + +V TY + A +E +L G+ PNV T+ V++ LCK+G +
Sbjct: 16 KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
D+A LL+ M + G P+A +YN ++ C +A + F SME C V +++I+
Sbjct: 76 DKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME---CEKNVITWTIM 132
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I+G CK + A + + +M KG P+ YN L ++H+V RA+ L EM+ G+
Sbjct: 133 IDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGL 192
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
A + TY T I G C+ + + A +LFR + C ++ YN L+ GL
Sbjct: 193 APNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 241
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ L G K + D +LF + + PD+ T++ L+ +C G V +
Sbjct: 474 PDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERL 533
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ S +P+ T+TSL+ G C R++EA + ++ GC+PNV TY LI+ R
Sbjct: 534 LEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCR 593
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQM-KDENINPDVV 181
G VA L EEM G F G +++A+++ ++ +DEN D+
Sbjct: 594 AGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMF 653
Query: 182 TY-----------------------------------TSVIRGFCYANDWNEAKCLLIEM 206
Y ++IRG C + +A +L EM
Sbjct: 654 AYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEM 713
Query: 207 -MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ + +PN + ++ EL + G+ +EA+ L D ++
Sbjct: 714 TLSRKSRPNAEAYEAVIQELAREGRHEEANALADELL 750
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 131/430 (30%), Positives = 219/430 (50%), Gaps = 47/430 (10%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++ I+ L K + F ++ G P+ +TYN+LIN FCK+ +V +++L
Sbjct: 7 VITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLK 66
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR-- 134
+ S PN VT++++I G C ++++ A LF ++ GC PN+ TYNTL++GL R
Sbjct: 67 EMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNG 126
Query: 135 ---------------------------------TGHTIVALNLFEEMASGNGEFGV---- 157
TG +AL +FE+ ++G+ V
Sbjct: 127 LMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYS 186
Query: 158 --------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
G +D+A +LF +M++ + PDVVT+T+++ G C + EA+ +L M D+
Sbjct: 187 TLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDR 246
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
PNV+T++ ++D LCK G++ +A + MI G+ PN YN+L+ GFC+T V+ A
Sbjct: 247 NCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSA 306
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
L M + GC + +Y+ LI+G CK A L+G+M +K PDV+ Y+ L
Sbjct: 307 LLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGG 366
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
++ +++ A LFD+M + V D T+ T ++G C + +A L + C D
Sbjct: 367 FCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPD 426
Query: 390 IRAYNCLIDG 399
+ Y L+DG
Sbjct: 427 VYTYTSLVDG 436
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 131/400 (32%), Positives = 204/400 (51%), Gaps = 13/400 (3%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP V +++ L L K D LF+++ PD+ T+ L++ CK R+
Sbjct: 179 PPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQ 238
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
VL + TPN +T++SLI GLC ++ +A +F ++ V G EPNV TYN+LI+G
Sbjct: 239 VLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFC 298
Query: 134 RTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
T AL L EEM + G +A LF MK + NPDV+
Sbjct: 299 MTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVI 358
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY+ +I GFC + A+ L +M+ Q V P+VVTF+ +++ C G +D+A RLL+ M
Sbjct: 359 TYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEM 418
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ P+ + Y +L+DGFC GR+ A+ + M GC V +Y+ LI+ +C+ +
Sbjct: 419 VASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKP 478
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD-GVAADTWTYRT 360
A L EM+ G++P+V+ Y +L +E A K+ + ++RD AD + YR
Sbjct: 479 TVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRV 538
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+DGLC+ + A+EL ++ Y LI GL
Sbjct: 539 MMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGL 578
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/397 (31%), Positives = 205/397 (51%), Gaps = 12/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ + + DT LF+++ G P+L TYN L++ C+ G + + +
Sbjct: 75 PNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYEL 134
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P+ ++ +L+ GLC +I A +F C P+V Y+TLI GL +
Sbjct: 135 LDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCK 194
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
TG A LFE+M + E V F + +A+++ M+D N P+V+T
Sbjct: 195 TGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVIT 254
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+S+I G C +A+ + M+ +G++PNVVT+N ++ C +D A L++ M
Sbjct: 255 YSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMT 314
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G P+ YNTL+DG C TGR A LF M++ C V +YS LI G+CK + I+
Sbjct: 315 ATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERID 374
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A +L+ +ML + + PDVV ++TL V+ A +L +EM + D +TY + +
Sbjct: 375 MARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLV 434
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
DG CK +VEA + + + C+ ++ Y LID
Sbjct: 435 DGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDA 471
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 131/434 (30%), Positives = 205/434 (47%), Gaps = 48/434 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N L L +N D L + GL PD ++Y+ L+ CK G++ V
Sbjct: 110 PNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKV 169
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
P+ V +++LI GLC R+ EA LF K+R CEP+V T+ L++GL +
Sbjct: 170 FEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCK 229
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
A + E M N V G V A+E+F +M I P+VVT
Sbjct: 230 GDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVT 289
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR------ 236
Y S+I GFC N + A L+ EM G P+++T+N ++D LCK G+ EA+R
Sbjct: 290 YNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMK 349
Query: 237 -----------------------------LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
L D M++ V P+ ++TL++G+C G V+
Sbjct: 350 AKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVD 409
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A+ L M + C+ V++Y+ L++G+CK + A + M +G +P+VV Y L
Sbjct: 410 DAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALI 469
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL-RILKC 386
+ A+KL +EM +GV + TYR+ I G C + EA ++ L R C
Sbjct: 470 DAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENC 529
Query: 387 ELDIRAYNCLIDGL 400
+ D+ AY ++DGL
Sbjct: 530 KADMFAYRVMMDGL 543
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 178/361 (49%), Gaps = 12/361 (3%)
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 110
++ T+ I+I+ CK R+ ++ + PN T+ LI G C ++ A L
Sbjct: 6 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVE 158
+++ G PNV TY+T+I+G R A LF +M
Sbjct: 66 KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
G +D+A EL +M++ + PD +Y +++ G C + A + + + P+VV +
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 185
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
+ ++ LCK G++DEA +L + M + P+ + LMDG C R+ A+++ +ME
Sbjct: 186 STLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 245
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
CT V +YS LI+G CK ++ A ++ M+ +GI+P+VV YN+L + V+
Sbjct: 246 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 305
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A L +EM G D TY T IDGLCK EA LF ++ C D+ Y+CLI
Sbjct: 306 ALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIG 365
Query: 399 G 399
G
Sbjct: 366 G 366
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 171/350 (48%), Gaps = 58/350 (16%)
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
N +T+T +I GLC +R+ EA F K++ G PN +TYN LING +
Sbjct: 6 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHK-------- 57
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
V +A L +MK+ + P+VVTY++VI GFC + A L +
Sbjct: 58 ---------------VHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQ 102
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M++ G PN+VT+N ++ LC+NG MDEA LLD M + G++P+ F Y+TLM G C TG+
Sbjct: 103 MVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGK 162
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
++ A ++F + C V +YS LI G CK ++ A L+ +M +PDVV +
Sbjct: 163 IDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTA 222
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI-- 383
L L + +++ A ++ + M+ + TY + IDGLCK + +A E+F+ + +
Sbjct: 223 LMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRG 282
Query: 384 ---------------------------------LKCELDIRAYNCLIDGL 400
C DI YN LIDGL
Sbjct: 283 IEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGL 332
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 175/349 (50%), Gaps = 13/349 (3%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V +++ L L K +FKR+ G+ P++ TYN LI+ FC V
Sbjct: 246 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 305
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+++ + + P+ +T+ +LI GLC R EA LF ++ C P+V TY+ LI
Sbjct: 306 ALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIG 365
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINP 178
G + +A LF++M V G VD A+ L +M + +P
Sbjct: 366 GFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSP 425
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
DV TYTS++ GFC EA+ +L M +G QPNVVT+ ++D C+ GK A +LL
Sbjct: 426 DVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLL 485
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME-SMGCTHTVFSYSILINGYCK 297
+ M+ GV+PN Y +L+ GFC TG + A+++ +E C +F+Y ++++G C+
Sbjct: 486 EEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCR 545
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+ AL L + G P IY L L + ++ +A ++ +EM
Sbjct: 546 TGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEM 594
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 142/283 (50%), Gaps = 23/283 (8%)
Query: 118 CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENIN 177
CE NV T+ +I+GL + + +A F +MK +
Sbjct: 3 CEKNVITWTIMIDGLCKANR-----------------------LPEATTYFAKMKKKGTV 39
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P+ TY +I GFC + + A LL EM + G+ PNVVT++ ++ C+ K+D A +L
Sbjct: 40 PNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKL 99
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
M++ G PN YNTL+ G C G ++ A EL M G FSY L+ G CK
Sbjct: 100 FRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCK 159
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+I+ AL ++ + + PDVV Y+TL L + +++ A KLF++M+ + D T
Sbjct: 160 TGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVT 219
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +DGLCK + EA ++ T+ C ++ Y+ LIDGL
Sbjct: 220 FTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGL 262
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ L G K + D +LF + + PD+ T++ L+ +C G V +
Sbjct: 355 PDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERL 414
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ S +P+ T+TSL+ G C R++EA + ++ GC+PNV TY LI+ R
Sbjct: 415 LEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCR 474
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQM-KDENINPDVV 181
G VA L EEM G F G +++A+++ ++ +DEN D+
Sbjct: 475 AGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMF 534
Query: 182 TY-----------------------------------TSVIRGFCYANDWNEAKCLLIEM 206
Y ++IRG C + +A +L EM
Sbjct: 535 AYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEM 594
Query: 207 -MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ + +PN + ++ EL + G+ +EA+ L D ++
Sbjct: 595 TLSRKSRPNAEAYEAVIQELAREGRHEEANALADELL 631
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 66/122 (54%)
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
M C V +++I+I+G CK + A + + +M KG P+ YN L ++H+V R
Sbjct: 1 MECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHR 60
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A+ L EM+ G+A + TY T I G C+ + + A +LFR + C ++ YN L+
Sbjct: 61 AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS 120
Query: 399 GL 400
GL
Sbjct: 121 GL 122
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/428 (30%), Positives = 222/428 (51%), Gaps = 29/428 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTV----------------LSLFKRLN 44
+ +F ML + PP + ++N + L K + D + L K+++
Sbjct: 159 YTLFHEMLG-QGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMS 217
Query: 45 STGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 104
GL PD+ TY++LI+ +CK+GR + + ++R P+A T+ +L+ G + ++
Sbjct: 218 GGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALV 277
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------- 157
+ L + G +N LI + A+ F EM V
Sbjct: 278 DMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVI 337
Query: 158 -----EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
G V+ A F QM E ++PD++T+TS+I G C +W + + L EM+++G+
Sbjct: 338 DILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIH 397
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
PN + N IMD LCK G++ EA D +I +GV+P+ Y L+DG+CL G+++ + +L
Sbjct: 398 PNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKL 457
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
M S+G +YS L+NGYCKN ++ AL+LY EM SK +KP+ + YN + LF
Sbjct: 458 LGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFH 517
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
+V A + + ++ G+ TY + GLC+NS++ EA+ +F+ LR + +L++R
Sbjct: 518 AGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRT 577
Query: 393 YNCLIDGL 400
+N +I GL
Sbjct: 578 FNIMIVGL 585
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 186/381 (48%), Gaps = 23/381 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FNIL AKN+ D ++ F + G P++ TY +I+ CK GRV +++
Sbjct: 298 FNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMV 357
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+P+ +TFTSLI GLC + L ++ G PN NT+++ L +
Sbjct: 358 SEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCK----- 412
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
EG V +A + F Q+ + PDVV+YT +I G+C +E+
Sbjct: 413 ------------------EGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDES 454
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
LL M+ G++P+ VT++ +++ CKNG++D+A L M V+PNA YN ++ G
Sbjct: 455 IKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHG 514
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
GRV A+E ++ + G + +Y+I++ G C+N ++ AL ++ + SK + +
Sbjct: 515 LFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLE 574
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
V +N + V L ++ ++ A LF + G+ D Y I + + E+ ELF
Sbjct: 575 VRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFL 634
Query: 380 TLRILKCELDIRAYNCLIDGL 400
++ C + R N ++ L
Sbjct: 635 SMEKNGCTANSRTLNAIVRKL 655
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 197/458 (43%), Gaps = 110/458 (24%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDT-------VLSLFKRLNSTG---LFPDL 52
+FD +L R V +FN + +A + +SLF + G L D
Sbjct: 36 LFDELLP-RARSASVHAFNRVLTVVAHGDSSSSQRHGAALAVSLFNTMAQVGVNKLATDA 94
Query: 53 YTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 112
T+ ILI CFC +G + L ESR AA
Sbjct: 95 CTFGILIRCFCNVGLLDFA-------------------------LEEESRGSRAAVHMMA 129
Query: 113 LRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMK 172
+ C PNV +YN +INGL++ EG VDKA LF +M
Sbjct: 130 DDGYNCPPNVLSYNMVINGLFK-----------------------EGEVDKAYTLFHEML 166
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG----------------VQPNVV 216
+ P++VTY SVI G C A ++A+ +L +M D+G +QP+VV
Sbjct: 167 GQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVV 226
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV---------- 266
T+++++D CK G+ EA + D M++ G P+A+ Y TL+ G+ G +
Sbjct: 227 TYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALM 286
Query: 267 -------------------------NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++A F+ M G + V +Y+ +I+ CK +
Sbjct: 287 IQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRV 346
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A+S + +M+S+G+ PD++ + +L L I + ++ KL EM G+ + T
Sbjct: 347 EDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTI 406
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+D LCK ++EA + F + + + D+ +Y LIDG
Sbjct: 407 MDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDG 444
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 126/265 (47%), Gaps = 18/265 (6%)
Query: 154 EFGVEGFVDKAKELFLQMKDENIN--PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
+F +E ++ M D+ N P+V++Y VI G + ++A L EM+ QG
Sbjct: 111 DFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGF 170
Query: 212 QPNVVTFNVIMDELCK----------------NGKMDEASRLLDLMIQIGVRPNAFVYNT 255
PN+VT+N ++D LCK G+++EA RLL M G++P+ Y+
Sbjct: 171 PPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSL 230
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L+D +C GR A+ +F SM G ++Y L++GY + L M+ G
Sbjct: 231 LIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDG 290
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
I + ++N L + +++A F EM++ G + + TY T ID LCK + +AV
Sbjct: 291 IPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAV 350
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
F + DI + LI GL
Sbjct: 351 SHFSQMVSEGLSPDIITFTSLIHGL 375
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 100/236 (42%), Gaps = 12/236 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+ IL + D + L R+ S GL PD TY+ L+N +CK GRV +
Sbjct: 433 PDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALAL 492
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ PNA+T+ ++ GL R++ A + K+ G + + TYN ++ GL
Sbjct: 493 YREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCE 552
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
AL +F+ + S + V F + AK LF + + PD +
Sbjct: 553 NSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAII 612
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
Y +I+ E+ L + M G N T N I+ +L + G + A L
Sbjct: 613 YGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYL 668
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 138/410 (33%), Positives = 211/410 (51%), Gaps = 15/410 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFG-CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
+F +L+ +P V +++ G C+A + +D LF +N G P TYN++I+
Sbjct: 32 LFQKLLHSGVTPSTVAYTSLIHGLCMANS--FDDARELFADMNRRGCPPSPVTYNVMIDA 89
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK G + ++ +++ P+ VT+ +++ GLC SR+ EA LF ++ GC PN
Sbjct: 90 SCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPN 149
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGN-----GEFGV-------EGFVDKAKELFL 169
++NT+I GL + A +F EM + + +G+ G +++A +LF
Sbjct: 150 RRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQ 209
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M D I P VTY VI G C A +EA L M +G +P+ TFN+++D CK G
Sbjct: 210 RMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRG 269
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+DEA RLL M G P+ Y+TL+ G C RV+ A+ L M C TV + +
Sbjct: 270 KLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQN 329
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
LI+G CK I+ A + M+S G PDVV YNTL Q ERA +L +M
Sbjct: 330 TLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR 389
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G+A + TY + GLCK + + EA +F ++ C ++ Y LI G
Sbjct: 390 GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILG 439
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/380 (31%), Positives = 190/380 (50%), Gaps = 24/380 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ M + +P I+ G L + D +F + + + PD ++Y ILI+
Sbjct: 137 LFNEMERLGCTPNRRSHNTIILG-LCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGL 195
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K G+++ + + R+L S TP+AVT+ +I G+C + EA LF +R GC P+
Sbjct: 196 AKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSR 255
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
FT+N LI+ + G +D+A L +M D+ PDVVT
Sbjct: 256 FTFNILIDAHCKRGK-----------------------LDEAFRLLKRMTDDGHVPDVVT 292
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+++I G C ++A+ LL +M+ + +P VVT N ++ LCK G++ EA +LD M+
Sbjct: 293 YSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMV 352
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G P+ YNTL+ G C G+ RA+EL M + G V +Y+ L++G CK +
Sbjct: 353 SSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLP 412
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A ++ +M S G P++ Y L + QV+ KLF EM G++ D Y T
Sbjct: 413 EACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLA 472
Query: 363 DGLCKNSYIVEAVELFRTLR 382
LCK+ A+E+ R R
Sbjct: 473 AELCKSGRSARALEILREGR 492
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/369 (30%), Positives = 188/369 (50%), Gaps = 12/369 (3%)
Query: 43 LNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 102
+N + PD ++Y ILI+ K G+++ + ++L S TP+ V +TSLI GLC +
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF-- 160
+A LF + GC P+ TYN +I+ + G A +L ++M V +
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 161 ----------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG 210
V++A LF +M+ P+ ++ ++I G C + ++A + EM +
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
+ P+ ++ +++D L K GK++EA +L M+ G+ P+A YN ++ G CL ++ A
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
ELF SM S GC + F+++ILI+ +CK +++ A L M G PDVV Y+TL L
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
I +V+ A L ++M + T T I GLCK I EA E+ + D+
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360
Query: 391 RAYNCLIDG 399
YN L+ G
Sbjct: 361 VTYNTLVHG 369
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 179/384 (46%), Gaps = 63/384 (16%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ +F ML+ +P V ++N++ + D L LFK + S G P +T+NILI+
Sbjct: 205 YKLFQRMLDSGITPSAV-TYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILID 263
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK G++ F +L R+ P+ VT+++LI GLC+ +R+ +A L + C+P
Sbjct: 264 AHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKP 323
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
V T NTLI+GL + G + +A+E+ M +PDV
Sbjct: 324 TVVTQNTLIHGLCKAGR-----------------------IKEAREVLDAMVSSGQSPDV 360
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY +++ G C A A+ LL +M+ +G+ PNVVT+ ++ LCK ++ EA +
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M G PN F Y L+ GFC G+V+ +LF
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLF--------------------------- 453
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW---T 357
GEM+ GI PD V+Y TL L + + RA ++ E R+ + ++ W
Sbjct: 454 --------GEMVCAGISPDHVVYGTLAAELCKSGRSARALEILRE-GRESLRSEAWGDEV 504
Query: 358 YRTFIDGLCKNSYIVEAVELFRTL 381
YR +DGL + + A+ R +
Sbjct: 505 YRFAVDGLLEAGKMEMALGFVRDM 528
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 113/267 (42%), Gaps = 29/267 (10%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V + N L L K + + S+G PD+ TYN L++ C+ G+
Sbjct: 319 RQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTER 378
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+L ++ PN VT+T+L+ GLC +R+ EA +F +++ GC PN+FTY LI
Sbjct: 379 ARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALIL 438
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
G G L LF EM I+PD V Y ++
Sbjct: 439 GFCSAGQVDGGLKLFGEMVCA-----------------------GISPDHVVYGTLAAEL 475
Query: 191 CYANDWNEAKCLLIE----MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
C + A +L E + + V F V D L + GKM+ A + M++ G
Sbjct: 476 CKSGRSARALEILREGRESLRSEAWGDEVYRFAV--DGLLEAGKMEMALGFVRDMVRGGQ 533
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELF 273
P +L+ G C +G+ A+ +
Sbjct: 534 LPAPERCASLVAGLCKSGQGGEARAVL 560
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/433 (31%), Positives = 224/433 (51%), Gaps = 59/433 (13%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F +M+ RP P + F+ L ++K K YD V+ L++++ G+ +L T NIL+NCF
Sbjct: 68 LFFHMVQCRPLPS-IADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ ++S LG++++ P+ VTF SL+ G C RI +A +F ++ G EPNV
Sbjct: 127 CRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNV 186
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
YNT+I+GL ++ VD A +L +M+ + I PD VT
Sbjct: 187 VIYNTIIDGLCKSKQ-----------------------VDNALDLLNRMEVDGIRPDAVT 223
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S+I G C + W++A ++ M + + P+V TFN ++D K G++ EA L + MI
Sbjct: 224 YNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMI 283
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ + P+ Y+ L+ G C+ R++ A+++F M S GC V +YSILINGYCK+K++E
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343
Query: 303 GALSLYGEMLSK-----------------------------------GIKPDVVIYNTLF 327
+ L+ EM + G+ P+++ YN L
Sbjct: 344 HGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLL 403
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
L + ++E+A + +MQ+ G+ AD TY I G+CK + +A +L+ +L +
Sbjct: 404 HGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLT 463
Query: 388 LDIRAYNCLIDGL 400
DI Y ++ GL
Sbjct: 464 PDIWTYTAMMLGL 476
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 171/349 (48%), Gaps = 12/349 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +F L + L +F R+ G P++ YN +I+ CK +V + +
Sbjct: 149 PDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDL 208
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R+ P+AVT+ SLI GLC R +A + + + P+VFT+N LI+ +
Sbjct: 209 LNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVK 268
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
G A L+EEM + + + + +D+A+++F M + PDVVT
Sbjct: 269 EGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVT 328
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+ +I G+C + L EM +GV N VT+ V++ C+ GK++ A + M+
Sbjct: 329 YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMV 388
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
GV PN YN L+ G C G++ +A + M+ G + +Y+I+I G CK E+
Sbjct: 389 FCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVA 448
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
A LY + KG+ PD+ Y + + L++ A LF +M+ DG+
Sbjct: 449 DAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGI 497
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 154/305 (50%), Gaps = 23/305 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L L + +D + + ++PD++T+N LI+ K GR+S +
Sbjct: 219 PDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEEL 278
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++R P+ VT++ LI GLC SR+ EA +F + GC P+V TY+ LING +
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ V+ +LF +M + + VTYT +I+G+C A
Sbjct: 339 SKK-----------------------VEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAG 375
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
N A+ + M+ GV PN++T+NV++ LC NGK+++A +L M + G+ + YN
Sbjct: 376 KLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYN 435
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
++ G C G V A +L+ S+ G T +++Y+ ++ G K A +L+ +M
Sbjct: 436 IIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKED 495
Query: 315 GIKPD 319
GI P+
Sbjct: 496 GILPN 500
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 117/240 (48%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D + +LF M P + ++ ++ ++ L +M G+ N+ T N+
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C+ ++ A L M+++G P+ + +L++GFC R+ A +F M MG
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMG 181
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
V Y+ +I+G CK+K+++ AL L M GI+PD V YN+L L + + A
Sbjct: 182 YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDAT 241
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++ M + + D +T+ ID K I EA EL+ + + DI Y+ LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGL 301
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 4/181 (2%)
Query: 224 ELCKNG----KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
E+ +NG K+D++ L M+Q P+ ++ L+ + + L+ M+ +
Sbjct: 51 EMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQML 110
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G H + + +IL+N +C+ ++ ALS G+M+ G +PD+V + +L ++ A
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDA 170
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+FD M G + Y T IDGLCK+ + A++L + + D YN LI G
Sbjct: 171 LYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISG 230
Query: 400 L 400
L
Sbjct: 231 L 231
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + ++N+L L N + L + + +G+ D+ TYNI+I CK G V+ +
Sbjct: 393 PPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWD 452
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
+ + TP+ T+T+++ GL + EA ALF K++ G PN
Sbjct: 453 LYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 129/377 (34%), Positives = 207/377 (54%), Gaps = 14/377 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + N++ L K +DT+ ++ + + G P++ TY LI+ C+ G F +
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ P V +T LI+GLC ESRI EA ++F +R G PN++TYNT+++G +
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275
Query: 135 TGHTIVALNLFEEMASGNG------EFGV--EGFVD-----KAKELFLQMKDENINPDVV 181
H AL L++EM G+G FG+ +G A++ + M + P++
Sbjct: 276 IAHVKKALELYQEML-GDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y +I G+C A + +EA L E+ + P+V T+++++ LC +M+EA LL M
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G PNA YNTL+DG+C G + +A E+ M G + ++S LI+GYCK ++
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A+ LY EM+ KG+ PDVV Y L F+ + AF+L EMQ G+ + +T
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCL 514
Query: 362 IDGLCKNSYIVEAVELF 378
IDGLCK+ I +A++LF
Sbjct: 515 IDGLCKDGRISDAIKLF 531
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/398 (31%), Positives = 191/398 (47%), Gaps = 22/398 (5%)
Query: 18 CSFNILFGCLAKNKHYD---TVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
C L CL ++ +V ++ RL S+ P+++ +LI F +MG V V
Sbjct: 91 CLMRDLIQCLQNSRRSRICCSVFNVLSRLESSKFTPNVF--GVLIIAFSEMGLVEEALWV 148
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ P ++ GL + R ++ + G PNV TY TLI+G R
Sbjct: 149 YYKMD---VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCR 205
Query: 135 TGHTIVALNLFEEMASGN-------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
G + A LF+EM G G E + +A+ +F M++ + P++
Sbjct: 206 QGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCG-ESRISEAESMFRTMRNSGMLPNLY 264
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY +++ G+C +A L EM+ G+ PNVVTF +++D LCK +M A + L M
Sbjct: 265 TYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDM 324
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
GV PN FVYN L+DG+C G ++ A L +E VF+YSILI G C +
Sbjct: 325 ASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRM 384
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A L EM KG P+ V YNTL + +E+A ++ +M G+ + T+ T
Sbjct: 385 EEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTL 444
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
IDG CK + A+ L+ + I D+ AY LIDG
Sbjct: 445 IDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDG 482
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 193/436 (44%), Gaps = 61/436 (13%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +FD M+ + P V + IL L S+F+ + ++G+ P+LYTYN +++
Sbjct: 213 FRLFDEMIE-KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMD 271
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+CK+ V + +L PN VTF LI GLC ++ A + FG P
Sbjct: 272 GYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVP 331
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASG-------------NGEFGV---------- 157
N+F YN LI+G + G+ AL+L E+ G GV
Sbjct: 332 NIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLL 391
Query: 158 ------------------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
EG ++KA E+ QM ++ I P+++T++++I G+C A
Sbjct: 392 QEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
A L EM+ +G+ P+VV + ++D K+G EA RL M + G+ PN F
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511
Query: 254 NTLMDGFCLTGRVNRAKELFVS-------------MESMGCTHTVFSYSILINGYCKNKE 300
+ L+DG C GR++ A +LF++ ++ C+ Y+ LI G C +
Sbjct: 512 SCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGR 571
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
I A + +M G++PDV + F + L ++ + G+ ++ YR
Sbjct: 572 IFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRV 631
Query: 361 FIDGLCKNSYIVEAVE 376
G ++ Y+ A+
Sbjct: 632 LAKGYEESGYLKSALR 647
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
+ES T VF +LI + + +E AL +Y +M + P + N + L + +
Sbjct: 119 LESSKFTPNVFG--VLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGR 173
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
+ +K++ +M G + + TY T IDG C+ ++A LF + K + Y
Sbjct: 174 FDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTI 233
Query: 396 LIDGL 400
LI GL
Sbjct: 234 LIRGL 238
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 138/410 (33%), Positives = 210/410 (51%), Gaps = 15/410 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFG-CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
+F +L+ +P V +++ G C+A + +D LF +N G P TYN++I+
Sbjct: 32 LFQKLLHSGVTPSTVAYTSLIHGLCMANS--FDDARELFADMNRRGCPPSPVTYNVIIDA 89
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK G + ++ +++ P+ VT+ +++ GLC R+ EA LF ++ GC PN
Sbjct: 90 SCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPN 149
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMAS-----GNGEFGV-------EGFVDKAKELFL 169
++NT+I GL + A +F EM + + +G+ G +++A +LF
Sbjct: 150 RRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFR 209
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M D I P VTY VI G C A +EA L M +G +P+ TFN+++D CK G
Sbjct: 210 RMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRG 269
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
KMDEA RLL M G P+ Y+TL+ G C RV+ A+ L M C TV + +
Sbjct: 270 KMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQN 329
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
LI+G CK I+ A + M+S G PDVV YNTL Q ERA +L +M
Sbjct: 330 TLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR 389
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G+A + TY + GLCK + + EA +F ++ C ++ Y LI G
Sbjct: 390 GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILG 439
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/380 (31%), Positives = 190/380 (50%), Gaps = 24/380 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ M + +P I+ G L + D +F + + + PD ++Y ILI+
Sbjct: 137 LFNEMERLGCTPNRRSHNTIILG-LCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGL 195
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K G+++ + + R+L S TP+AVT+ +I G+C + EA LF +R GC P+
Sbjct: 196 AKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSR 255
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
FT+N LI+ + G +D+A L +M D+ PDVVT
Sbjct: 256 FTFNILIDAHCKRGK-----------------------MDEAFRLLKRMTDDGHVPDVVT 292
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+++I G C ++A+ LL +M+ + +P VVT N ++ LCK G++ EA +LD M+
Sbjct: 293 YSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMV 352
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G P+ YNTL+ G C G+ RA+EL M + G V +Y+ L++G CK +
Sbjct: 353 SSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLP 412
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A ++ +M S G P++ Y L + QV+ KLF EM G++ D Y T
Sbjct: 413 EACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLA 472
Query: 363 DGLCKNSYIVEAVELFRTLR 382
LCK+ A+E+ R R
Sbjct: 473 AELCKSGRSARALEILREGR 492
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 188/369 (50%), Gaps = 12/369 (3%)
Query: 43 LNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 102
+N + PD ++Y ILI+ K G+++ + ++L S TP+ V +TSLI GLC +
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV----- 157
+A LF + GC P+ TYN +I+ + G A +L ++M V
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 158 -------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG 210
G V++A LF +M+ P+ ++ ++I G C + ++A + EM +
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
+ P+ ++ +++D L K GK++EA +L M+ G+ P+A YN ++ G CL ++ A
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
ELF SM S GC + F+++ILI+ +CK +++ A L M G PDVV Y+TL L
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
I +V+ A L ++M + T T I GLCK I EA E+ + D+
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360
Query: 391 RAYNCLIDG 399
YN L+ G
Sbjct: 361 VTYNTLVHG 369
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 178/384 (46%), Gaps = 63/384 (16%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ +F ML+ +P V ++N++ + D L LFK + S G P +T+NILI+
Sbjct: 205 YKLFRRMLDSGITPSAV-TYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILID 263
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK G++ F +L R+ P+ VT+++LI GLC+ +R+ +A L + C+P
Sbjct: 264 AHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKP 323
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
V T NTLI+GL + G + +A+E+ M +PDV
Sbjct: 324 TVVTQNTLIHGLCKAGR-----------------------IKEAREVLDAMVSSGQSPDV 360
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY +++ G C A A+ LL +M+ +G+ PNVVT+ ++ LCK ++ EA +
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M G PN F Y L+ GFC G+V+ +LF
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLF--------------------------- 453
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW---T 357
GEM+ GI PD V+Y TL L + + RA ++ E R+ + ++ W
Sbjct: 454 --------GEMVCAGISPDHVVYGTLAAELCKSGRSARALEILRE-GRESLRSEAWGDEV 504
Query: 358 YRTFIDGLCKNSYIVEAVELFRTL 381
YR +DGL + A+ R +
Sbjct: 505 YRFAVDGLLDAGKMEMALGFVRDM 528
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 154/317 (48%), Gaps = 23/317 (7%)
Query: 84 TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALN 143
+P++ ++ LI GL ++ +A LF KL G P+ Y +LI+GL N
Sbjct: 7 SPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGL-------CMAN 59
Query: 144 LFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
F D A+ELF M P VTY +I C EA L+
Sbjct: 60 SF----------------DDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLI 103
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
+M++ G P+VVT+N +MD LCK+G+++EA L + M ++G PN +NT++ G C
Sbjct: 104 KKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQ 163
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
++++A ++F ME+ +SY ILI+G K ++ A L+ ML GI P V Y
Sbjct: 164 SKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTY 223
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
N + + + ++ A +LF M+ G +T+ ID CK + EA L + +
Sbjct: 224 NVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTD 283
Query: 384 LKCELDIRAYNCLIDGL 400
D+ Y+ LI GL
Sbjct: 284 DGHVPDVVTYSTLISGL 300
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 112/267 (41%), Gaps = 29/267 (10%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V + N L L K + + S+G PD+ TYN L++ C+ G+
Sbjct: 319 RQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTER 378
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+L ++ PN VT+T+L+ GLC +R+ EA +F +++ GC PN+FTY LI
Sbjct: 379 ARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALIL 438
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
G G L LF EM I+PD V Y ++
Sbjct: 439 GFCSAGQVDGGLKLFGEMVCA-----------------------GISPDHVVYGTLAAEL 475
Query: 191 CYANDWNEAKCLLIE----MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
C + A +L E + + V F V D L GKM+ A + M++ G
Sbjct: 476 CKSGRSARALEILREGRESLRSEAWGDEVYRFAV--DGLLDAGKMEMALGFVRDMVRGGQ 533
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELF 273
P +L+ G C +G+ A+ +
Sbjct: 534 LPAPERCASLVAGLCKSGQGGEARAVL 560
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 129/377 (34%), Positives = 207/377 (54%), Gaps = 14/377 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + N++ L K +DT+ ++ + + G P++ TY LI+ C+ G F +
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ P V +T LI+GLC ESRI EA ++F +R G PN++TYNT+++G +
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275
Query: 135 TGHTIVALNLFEEMASGNG------EFGV--EGFVD-----KAKELFLQMKDENINPDVV 181
H AL L++EM G+G FG+ +G A++ + M + P++
Sbjct: 276 IAHVKKALELYQEML-GDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y +I G+C A + +EA L E+ + P+V T+++++ LC +M+EA LL M
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G PNA YNTL+DG+C G + +A E+ M G + ++S LI+GYCK ++
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A+ LY EM+ KG+ PDVV Y L F+ + AF+L EMQ G+ + +T
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCL 514
Query: 362 IDGLCKNSYIVEAVELF 378
IDGLCK+ I +A++LF
Sbjct: 515 IDGLCKDGRISDAIKLF 531
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 126/398 (31%), Positives = 191/398 (47%), Gaps = 22/398 (5%)
Query: 18 CSFNILFGCLAKNKHYD---TVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
C L CL ++ +V ++ RL S+ P+++ +LI F +MG V V
Sbjct: 91 CLMRDLIQCLQNSRRSRICCSVFNVLSRLESSKFTPNVF--GVLIIAFSEMGLVEEALWV 148
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ P ++ GL + R ++ + G PNV TY TLI+G R
Sbjct: 149 YYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCR 205
Query: 135 TGHTIVALNLFEEMASGN-------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
G + A LF+EM G G E + +A+ +F M++ + P++
Sbjct: 206 QGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCG-ESRISEAESMFRTMRNSGMLPNLY 264
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY +++ G+C +A L EM+ G+ PNVVTF +++D LCK +M A + L M
Sbjct: 265 TYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDM 324
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
GV PN FVYN L+DG+C G ++ A L +E VF+YSILI G C +
Sbjct: 325 ASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRM 384
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A L EM KG P+ V YNTL + +E+A ++ +M G+ + T+ T
Sbjct: 385 EEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTL 444
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
IDG CK + A+ L+ + I D+ AY LIDG
Sbjct: 445 IDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDG 482
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 151/322 (46%), Gaps = 48/322 (14%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +FD M+ + P V + IL L S+F+ + ++G+ P+LYTYN +++
Sbjct: 213 FRLFDEMIEKKIFPT-VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMD 271
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+CK+ V + +L PN VTF LI GLC ++ A + FG P
Sbjct: 272 GYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVP 331
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASG-------------NGEFGV---------- 157
N+F YN LI+G + G+ AL+L E+ G GV
Sbjct: 332 NIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLL 391
Query: 158 ------------------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
EG ++KA E+ QM ++ I P+++T++++I G+C A
Sbjct: 392 QEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
A L EM+ +G+ P+VV + ++D K+G EA RL M + G+ PN F
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511
Query: 254 NTLMDGFCLTGRVNRAKELFVS 275
+ L+DG C GR++ A +LF++
Sbjct: 512 SCLIDGLCKDGRISDAIKLFLA 533
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 141/337 (41%), Gaps = 34/337 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L K + + + + ++ G+ P++ T++ LI+ +CK G++ +
Sbjct: 401 PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGL 460
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ P+ V +T+LI G + EA L +++ G PNVFT + LI+GL +
Sbjct: 461 YTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDK--------AKELFLQMKDE------------ 174
G A+ LF + +D+ A LF + +
Sbjct: 521 DGRISDAIKLFLAKTGTDTTGSKTNELDRSLYQMCSLALSLFRGISEPCICVIRVTKLFA 580
Query: 175 -NINPDVVTYTSVIRGFC------YANDWNEAKCLLIEMMDQGVQPNVV-TFNVI--MDE 224
N P +T + Y N +K LL + P+ + +F+++ +
Sbjct: 581 TNNQPKAHLHTHLKPPKSNQTLKRYLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFALKA 640
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
+ E ++ L+I G P F+ +L+ + TG V A +F + S
Sbjct: 641 CTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPS----KN 696
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
+ S++ +I+ Y N+ AL L+ +M ++PD+V
Sbjct: 697 LISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIV 733
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 118/278 (42%), Gaps = 36/278 (12%)
Query: 10 MRPSPPPVCSFNILFG--------CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
+R +P + SF+++F L + K ++ F G P ++ LI+
Sbjct: 622 LRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVINF------GFEPIIFLQTSLISM 675
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
+ G V+ + I + N +++TS+I R +A LF ++++ +P+
Sbjct: 676 YSATGNVADAHNMFDEIP----SKNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPD 731
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE----------GFVDKAKELFLQM 171
+ T ++ G AL++ E + + G++ K E+
Sbjct: 732 IVTVTVALSACADLG----ALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTAR 787
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM-DQGVQPNVVTFNVIMDELCKNGK 230
+ + P+ VT+ V+ +A E K M D ++P + F ++D LC+ G
Sbjct: 788 RFSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGL 847
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
+ EA + ++++ VRPNA V+ TL+ L G ++
Sbjct: 848 LTEA---YEFILKMPVRPNAVVWRTLLGACSLQGMWDK 882
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 88/211 (41%), Gaps = 38/211 (18%)
Query: 85 PNAVTFTSLIKGLCA---ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVA 141
P+++ SL+ L A +S ++E + + FG EP +F +LI+ TG+ A
Sbjct: 626 PSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISMYSATGNVADA 685
Query: 142 LNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
N+F+E+ S N ++++TSVI + N+A
Sbjct: 686 HNMFDEIPSKN---------------------------LISWTSVISAYVDNQRPNKALQ 718
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
L +M VQP++VT V + G +D + + G+ + + N+L++ +
Sbjct: 719 LFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYS 778
Query: 262 LTGRVNRAKELFVSMES--------MGCTHT 284
G + A+ + + + M C+H
Sbjct: 779 KCGEIGTARRFSLVLPNDVTFMGVLMACSHA 809
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
+ES T VF +LI + + +E AL +Y +M + P + N + L + +
Sbjct: 119 LESSKFTPNVFG--VLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGR 173
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
+ +K++ +M G + + TY T IDG C+ ++A LF + K + Y
Sbjct: 174 FDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTI 233
Query: 396 LIDGL 400
LI GL
Sbjct: 234 LIRGL 238
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 138/434 (31%), Positives = 211/434 (48%), Gaps = 62/434 (14%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML M+P PP FN L +AK KH+ T+LSL +++S G+ P++YT +ILIN FC
Sbjct: 49 FNRMLRMQP-PPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFC 107
Query: 64 KM--GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
+ G++ + +++ F P+ VT+ +LI GLC A L + C+PN
Sbjct: 108 HLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPN 167
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
VF YNT+I+ L + A NLF EM + + I+PD+
Sbjct: 168 VFAYNTIIDSLCKDRQVTEAFNLFSEMVT-----------------------KGISPDIF 204
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY S+I C +W LL EM+D + P+VV+FN ++D LCK GK+ EA ++D M
Sbjct: 205 TYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKM 264
Query: 242 IQIG-VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
IQ G PN YNTL++G+C R+++A LF M +YS LI+G C +
Sbjct: 265 IQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVER 324
Query: 301 IEGALSLYGEMLS-----------------------------------KGIKPDVVIYNT 325
++ A++L+ EM++ + PD+ + N
Sbjct: 325 LQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNI 384
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
+ ++E A LF + G+ D WTY I+GLC+ + EA +LFR +
Sbjct: 385 AIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENG 444
Query: 386 CELDIRAYNCLIDG 399
C L+ YN + G
Sbjct: 445 CTLNGCIYNTITRG 458
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/390 (30%), Positives = 193/390 (49%), Gaps = 41/390 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + L K++ +LF + + G+ PD++TYN LI+ C + H +
Sbjct: 166 PNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATL 225
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPNVFTYNTLINGLY 133
L ++ S P+ V+F +++ LC E ++ EA + K+ + GC PNV +YNTLING
Sbjct: 226 LNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYC 285
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ +DKA LF +M + + PD VTY+++I G C+
Sbjct: 286 KIQR-----------------------IDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHV 322
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+A L EM+ PN+VT+ +++D LCKN + EA LL + + P+ V
Sbjct: 323 ERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVN 382
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N +DG C G + A++LF ++ S G V++YSI+ING C+ ++ A L+ EM
Sbjct: 383 NIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDE 442
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI-----DGL--- 365
G + IYNT+ ++ RA +L EM G +AD T F+ DGL
Sbjct: 443 NGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQS 502
Query: 366 --------CKN-SYIVEAVELFRTLRILKC 386
CK S+I E V + + + ++ C
Sbjct: 503 LKQILRDFCKQKSWIYENVMVLQEIILVNC 532
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 122/242 (50%), Gaps = 3/242 (1%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A F +M P V + ++ + L +M G+ PN+ T ++
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101
Query: 221 IMDELCK--NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
+++ C GK+ EA L D MI G RP+ Y TL++G C G + A L SM
Sbjct: 102 LINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ 161
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
C VF+Y+ +I+ CK++++ A +L+ EM++KGI PD+ YN+L L + + +
Sbjct: 162 KNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKH 221
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF-RTLRILKCELDIRAYNCLI 397
L +EM + D ++ T +D LCK + EA ++ + ++ C ++ +YN LI
Sbjct: 222 VATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLI 281
Query: 398 DG 399
+G
Sbjct: 282 NG 283
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 103/248 (41%), Gaps = 23/248 (9%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M+ P V S+N L K + D + LF + L PD TY+ LI+
Sbjct: 260 VVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGL 319
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C + R+ + ++ PN VT+ L+ LC + EA AL + +P++
Sbjct: 320 CHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDI 379
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
N I+G+ R G ++ A++LF + + + PDV T
Sbjct: 380 QVNNIAIDGMCRAGE-----------------------LEAARDLFSNLSSKGLQPDVWT 416
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+ +I G C +EA L EM + G N +N I +N + A +LL M+
Sbjct: 417 YSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMV 476
Query: 243 QIGVRPNA 250
G +A
Sbjct: 477 ARGFSADA 484
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 130/398 (32%), Positives = 218/398 (54%), Gaps = 27/398 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P + F+ L +AK+K+YD V+SLF + G+ DLYTYNI+INC
Sbjct: 56 LFCNMIQSRP-LPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCL 114
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ R V+G++++ + P+ VT +SLI G C +R+ A L +K+ C+ +V
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDV 174
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
YNT+I+G +TG V+ A LF +M+ + + D VT
Sbjct: 175 VIYNTIIDGFCKTG-----------------------LVNNALVLFGRMERDGVRADTVT 211
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S++ G C + ++A L+ +M+ + + PNV+TF +++ + GK EA + + MI
Sbjct: 212 YNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMI 271
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ + P+ F YN+++ G C+ G+V+ AK++ M + GC V +Y+ LING+CK K ++
Sbjct: 272 RRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVD 331
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
L EM +G+ D V +NT+ F+ + + A ++F M G + TY +
Sbjct: 332 EGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILL 388
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GLC N + +A+ LF +++ + ELDI YN +I G+
Sbjct: 389 YGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGM 426
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 124/274 (45%), Gaps = 35/274 (12%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D+A +LF M P +V ++ ++ + +++ L M G+ ++ T+N+
Sbjct: 50 LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ LC+ + A ++ M++ G P+ ++L++GFC RV A +L ME M
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL-------------- 326
C V Y+ +I+G+CK + AL L+G M G++ D V YN+L
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229
Query: 327 -----------------FVVLFEIHQVERAF----KLFDEMQRDGVAADTWTYRTFIDGL 365
F L E F K ++EM R + D +TY + I GL
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGL 289
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
C + + EA ++ + C D+ YN LI+G
Sbjct: 290 CMHGQVDEAKQILDLMVTKGCFPDVVTYNTLING 323
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
S P + +++IL L N + L LF+ + + + D+ TYNI+I+ C +G V +
Sbjct: 377 SRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAW 436
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+ + P+ VT+T++I G C + +A L+ K++ G P
Sbjct: 437 DLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGLLP 484
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 133/441 (30%), Positives = 217/441 (49%), Gaps = 54/441 (12%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
S P V S+ + K S + + + PD+ TY+ +I CK +
Sbjct: 192 SAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAM 251
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN-----VFTYNT 127
VL ++++ PN T+TS++ G C+ + EA K+R G EP+ + TY T
Sbjct: 252 EVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCT 311
Query: 128 LINGLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDE 174
L+ G Y T +V ++ ++ NG + +G VD+A +F +M+ +
Sbjct: 312 LLQG-YATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQ 370
Query: 175 NINPDVVTY-----------------------------------TSVIRGFCYANDWNEA 199
+NPD VTY S+I G C N W A
Sbjct: 371 GLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERA 430
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
+ L++EM+D+G+ N + FN I+D CK G++ E+ +L DLM++IGV+P+ Y+TL+DG
Sbjct: 431 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDG 490
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
+CL G+++ A +L M S+G +Y LINGYCK + AL L+ EM S G+ PD
Sbjct: 491 YCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPD 550
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
++ YN + LF+ + A +L+ + G + TY + GLCKN +A+ +F+
Sbjct: 551 IITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQ 610
Query: 380 TLRILKCELDIRAYNCLIDGL 400
L ++ +L+ R +N +ID L
Sbjct: 611 NLCLMDLKLEARTFNIMIDAL 631
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 192/407 (47%), Gaps = 31/407 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG---LFPDLYTYNILI 59
+FD +L R + N +A++ V S + R+ G + P ++TY ILI
Sbjct: 37 VFDELLR-RGRGASIYGLNRALADVARHSPAAAV-SRYNRMARAGAGKVTPTVHTYAILI 94
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGC 118
C C+ R+ GF LG +++ F A+TFT L+KGLCA+ R +A + ++ C
Sbjct: 95 GCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSC 154
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINP 178
P+VF+ L+ GL + AL L MA G G P
Sbjct: 155 MPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSA--------------------P 194
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
DVV+YT+VI GF D +A EM+D+ + P+VVT++ I+ LCK MD+A +L
Sbjct: 195 DVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVL 254
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA-----KELFVSMESMGCTHTVFSYSILIN 293
M++ GV PN Y ++M G+C +G+ A K +E G + +Y L+
Sbjct: 255 TSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQ 314
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
GY + G +L M+ GI PD +YN L + +V+ A +F +M++ G+
Sbjct: 315 GYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNP 374
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D TY I LCK+ + +A+ F + YN LI GL
Sbjct: 375 DAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGL 421
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 184/387 (47%), Gaps = 12/387 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++ L A + +L + G+ PD Y YNILI + K G+V +V
Sbjct: 304 PDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLV 363
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ + P+AVT+ ++I LC R+ +A F ++ G P YN+LI+GL
Sbjct: 364 FSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCT 423
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
A L EM EG V ++++LF M + PD++T
Sbjct: 424 CNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 483
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+++I G+C A +EA LL M+ G++PN VT+ +++ CK +M +A L M
Sbjct: 484 YSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEME 543
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
GV P+ YN ++ G T R AKEL+V + G + +Y+I+++G CKNK +
Sbjct: 544 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTD 603
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL ++ + +K + +N + L ++ + A LF +G+ + WTYR
Sbjct: 604 DALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMA 663
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELD 389
+ + + E +LF ++ C +D
Sbjct: 664 ENIIGQGLLEELDQLFLSMEDNGCTVD 690
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 165/404 (40%), Gaps = 49/404 (12%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +NIL AK D + +F ++ GL PD TY +I CK GRV +
Sbjct: 339 PDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLY 398
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCA----------------------------------- 99
+++ +P + + SLI GLC
Sbjct: 399 FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 458
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG-------- 151
E R++E+ LF + G +P++ TY+TLI+G G A+ L M S
Sbjct: 459 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVT 518
Query: 152 -----NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
NG + D A LF +M+ ++PD++TY +++G AK L + +
Sbjct: 519 YRTLINGYCKISRMGD-ALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 577
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+ G Q + T+N+I+ LCKN D+A R+ + + ++ A +N ++D GR
Sbjct: 578 TESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRN 637
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
AK+LFV+ S G ++Y ++ +E L+ M G D + N +
Sbjct: 638 GEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFI 697
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
L + ++ RA + + + T FID L Y
Sbjct: 698 VRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 741
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 133/434 (30%), Positives = 217/434 (50%), Gaps = 47/434 (10%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP V ++N L L K + D +++ + + G+ PD TYNI+I +C +G++
Sbjct: 232 PPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVR 291
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L ++ S P+ VT++ LI+ C R EA ++F + G +PN Y+ L++G
Sbjct: 292 LLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYA 351
Query: 134 RTGHTIVALNLFEEMASGNGEF------------GVEGFVDKAKELFLQMKDENINPDVV 181
G I +L + M F G VDKA F +M+ + PDVV
Sbjct: 352 TKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVV 411
Query: 182 TY-----------------------------------TSVIRGFCYANDWNEAKCLLIEM 206
+Y TS+I G C +W + + L EM
Sbjct: 412 SYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEM 471
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+++G+ P+ + N IMD LCK G++ EA D++I IGV+P+ YNTL+DG+C G++
Sbjct: 472 INRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKM 531
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ + + M S+G ++Y+ L+NGY KN +E AL+LY EM K +K + N +
Sbjct: 532 DESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIM 591
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
LF+ ++ A +L+ +M G TY T + GLC+NS + EA+ +F LR +
Sbjct: 592 LHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEF 651
Query: 387 ELDIRAYNCLIDGL 400
ELD+R ++ +I+ L
Sbjct: 652 ELDVRTFSIVINAL 665
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 130/421 (30%), Positives = 200/421 (47%), Gaps = 24/421 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDT-------VLSLFKRLNSTGLFPDLYTY 55
+FD +L + P V +FN + +A+ + +SLF + +G+
Sbjct: 36 LFDELLP-QARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGVNMMAAII 94
Query: 56 NILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKLR 114
ILI CFC +GR+ F L++ + VT LIKGLC +R +A + F ++
Sbjct: 95 GILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMP 154
Query: 115 VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG---------------EFGVEG 159
G P+VF+YN LI GL + AL L M + G F EG
Sbjct: 155 ELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEG 214
Query: 160 FVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 219
VDKA LF +M + + PDVVTY S+I G C A ++A +L M D+GV P+ T+N
Sbjct: 215 EVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYN 274
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
+++ C G+++EA RLL M G++P+ Y+ L+ +C GR A+ +F SM
Sbjct: 275 IMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRK 334
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G Y IL++GY + L M+ GI + +N L + V++A
Sbjct: 335 GQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKA 394
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
F EM+++G+ D +Y T I LCK + +AV F + +I ++ LI G
Sbjct: 395 MTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHG 454
Query: 400 L 400
L
Sbjct: 455 L 455
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/430 (29%), Positives = 201/430 (46%), Gaps = 53/430 (12%)
Query: 22 ILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF-VVLGRILR 80
IL C D + F TG T N LI C R +V R+
Sbjct: 96 ILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPE 155
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG---CEPNVFTYNTLINGLYRTGH 137
+TP+ ++ +LIKGLC E + EA L + G C PNV +YNT+I+G ++ G
Sbjct: 156 LGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGE 215
Query: 138 TIVALNLFEEMASGNG--------EFGVEGF-----VDKAKELFLQMKDENINPDVVTYT 184
A LF EM G G ++G +DKA + M D+ + PD TY
Sbjct: 216 VDKAYFLFHEMM-GQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYN 274
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+IRG+C EA LL +M G+QP+VVT+++++ CK G+ EA + D M++
Sbjct: 275 IMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRK 334
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G +PN+ +Y+ L+ G+ G + ++L M G +++ILI Y K+ ++ A
Sbjct: 335 GQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKA 394
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI-- 362
++ + EM G++PDVV Y+T+ +L + +VE A F++M +G++ + ++ + I
Sbjct: 395 MTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHG 454
Query: 363 ---------------------------------DGLCKNSYIVEAVELFRTLRILKCELD 389
D LCK +VEA + F + + + D
Sbjct: 455 LCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPD 514
Query: 390 IRAYNCLIDG 399
+ +YN LIDG
Sbjct: 515 VVSYNTLIDG 524
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 184/382 (48%), Gaps = 23/382 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+FNIL AK+ D ++ F + GL PD+ +Y+ +I+ CK GRV ++
Sbjct: 377 AFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQM 436
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ +PN ++FTSLI GLC+ + L ++ G P+ NT+++ L +
Sbjct: 437 VSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCK---- 492
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
EG V +A++ F + + PDVV+Y ++I G+C+ +E
Sbjct: 493 -------------------EGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDE 533
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
+ L M+ G++P+ T+N +++ KNG++++A L M + V+ A N ++
Sbjct: 534 SIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLH 593
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G GR+ A+EL++ M G + +Y+ ++ G C+N ++ AL ++ ++ SK +
Sbjct: 594 GLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFEL 653
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
DV ++ + L ++ +++ A LF M G D TY I + + E+ LF
Sbjct: 654 DVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLF 713
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
++ C D N ++ L
Sbjct: 714 LSMEKNGCAADSHMLNIIVRRL 735
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 134/298 (44%), Gaps = 13/298 (4%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+N R P N + L K F + G+ PD+ +YN LI+ +C +G
Sbjct: 471 MIN-RGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVG 529
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
++ L R++ P++ T+ SL+ G R+ +A AL+ ++ + T N
Sbjct: 530 KMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSN 589
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDE 174
+++GL++ G + A L+ +M + +E + VD+A +F ++ +
Sbjct: 590 IMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSK 649
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
DV T++ VI +EAK L M+ +G P+V+T+++++ + G ++E+
Sbjct: 650 EFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEES 709
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
L M + G ++ + N ++ G V RA ++ + + ++LI
Sbjct: 710 DNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEASTAALLI 767
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 234 bits (597), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 139/438 (31%), Positives = 221/438 (50%), Gaps = 49/438 (11%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP + ++N + L K + D + +++ + + P+ +TYN LI + G+
Sbjct: 251 RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKE 310
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
V + R P+ VT + L+ LC +I EA +F + + G P+VF+YN ++N
Sbjct: 311 AVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLN 370
Query: 131 GLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENIN 177
G G + +LF+ M G+G + G +DKA +F +M+D +
Sbjct: 371 GYATKGCLVDMTDLFDLML-GDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 429
Query: 178 PDVVTYTSVI-----------------------------------RGFCYANDWNEAKCL 202
PDVVTY +VI +GFC +AK L
Sbjct: 430 PDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKEL 489
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
+ E+M+ G+ ++V F+ I++ LCK G++ +A + DL + +G+ P+A VYN LMDG+CL
Sbjct: 490 ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCL 549
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G++ +A +F +M S G V Y L+NGYCK I+ LSL+ EML +GIKP ++
Sbjct: 550 VGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTIL 609
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
Y+ + LFE + A F EM G+A D TY + GL KN EA+ LF+ LR
Sbjct: 610 YSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELR 669
Query: 383 ILKCELDIRAYNCLIDGL 400
+ +++I N +IDG+
Sbjct: 670 AMNVKINIITLNTMIDGM 687
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 196/401 (48%), Gaps = 15/401 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF-V 73
P ++ IL C + + L+ F +L TGL ++ N L+ FC+ R +
Sbjct: 112 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 171
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG--CEPNVFTYNTLING 131
+L R P+ +++ L+K LC + + +A L + G C PNV YNT+I+G
Sbjct: 172 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 231
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPD 179
++ G A +LF+EM + + +DKA+ QM ++ + P+
Sbjct: 232 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 291
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
TY ++I G+ W EA + EM + P+VVT +++M LCK GK+ EA + D
Sbjct: 292 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 351
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M G P+ F YN +++G+ G + +LF M G +++++LI Y
Sbjct: 352 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 411
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++ A+ ++ EM G+KPDVV Y T+ L I +++ A + F++M GVA D + Y
Sbjct: 412 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 471
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I G C + +++A EL + LDI ++ +I+ L
Sbjct: 472 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 512
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 183/384 (47%), Gaps = 20/384 (5%)
Query: 36 VLSLFKRLNSTG-----LFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTF 90
++LF R S L P +TY IL++C + R G++LR+ N +
Sbjct: 93 AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIA 152
Query: 91 TSLIKGLCAESRIMEA-AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
L++G C R EA L + GC P+VF+Y+ L+ L G + A +L MA
Sbjct: 153 NHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA 212
Query: 150 SGNG--------------EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
G F EG V+KA +LF +M I PD+VTY SV+ C A
Sbjct: 213 EGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARA 272
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
++A+ L +M+++ V PN T+N ++ G+ EA R+ M + + P+ +
Sbjct: 273 MDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSM 332
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
LM C G++ A+++F +M G VFSY+I++NGY + L+ ML G
Sbjct: 333 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDG 392
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
I PD +N L +++A +F+EM+ GV D TYRT I LC+ + +A+
Sbjct: 393 IAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM 452
Query: 376 ELFRTLRILKCELDIRAYNCLIDG 399
E F + D AYNCLI G
Sbjct: 453 EKFNQMIDQGVAPDKYAYNCLIQG 476
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 194/410 (47%), Gaps = 13/410 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M M+ P V S+NI+ A + LF + G+ PD YT+N+LI +
Sbjct: 349 VFDTMA-MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAY 407
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
G + ++ + P+ VT+ ++I LC ++ +A F ++ G P+
Sbjct: 408 ANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 467
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQ 170
+ YN LI G G + A L E+ + + G V A+ +F
Sbjct: 468 YAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDL 527
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ ++PD V Y ++ G+C +A + M+ G++PNVV + +++ CK G+
Sbjct: 528 TVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGR 587
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+DE L M+Q G++P+ +Y+ ++DG GR AK F M G + +Y+I
Sbjct: 588 IDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNI 647
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
++ G KN+ + A+ L+ E+ + +K +++ NT+ +F+ +VE A LF + R
Sbjct: 648 VLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSR 707
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ TY I L K + EA ++F +++ CE + R N ++ L
Sbjct: 708 LVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVREL 757
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 163/361 (45%), Gaps = 12/361 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L + D + F ++ G+ PD Y YN LI FC G + +
Sbjct: 430 PDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKEL 489
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ I+ + + V F+S+I LC R+M+A +F G P+ YN L++G
Sbjct: 490 ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCL 549
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
G AL +F+ M S E V G+ +D+ LF +M I P +
Sbjct: 550 VGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTIL 609
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+ +I G A AK EM + G+ ++ T+N+++ L KN DEA L +
Sbjct: 610 YSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELR 669
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ V+ N NT++DG T RV AK+LF S+ +V +YSI+I K +E
Sbjct: 670 AMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVE 729
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A ++ M + G +P+ + N + L + +++ RA ++ + + T +
Sbjct: 730 EAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLV 789
Query: 363 D 363
D
Sbjct: 790 D 790
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 174/384 (45%), Gaps = 13/384 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD ML P +FN+L A D + +F + G+ PD+ TY +I
Sbjct: 384 LFDLMLG-DGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 442
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C++G++ +++ P+ + LI+G C +++A L +++ G ++
Sbjct: 443 CRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 502
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
++++IN L + G + A N+F+ + + + G ++KA +F
Sbjct: 503 VFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDA 562
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M I P+VV Y +++ G+C +E L EM+ +G++P+ + +++I+D L + G+
Sbjct: 563 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGR 622
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
A M + G+ + YN ++ G + A LF + +M + + +
Sbjct: 623 TVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 682
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+I+G + + +E A L+ + + P VV Y+ + L + VE A +F MQ G
Sbjct: 683 MIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 742
Query: 351 VAADTWTYRTFIDGLCKNSYIVEA 374
++ + L K + IV A
Sbjct: 743 CEPNSRLLNHVVRELLKKNEIVRA 766
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 114/283 (40%), Gaps = 48/283 (16%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IFD +N+ P V +N+L + L +F + S G+ P++ Y L+N +
Sbjct: 524 IFDLTVNVGLHPDAVV-YNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGY 582
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM------------------ 104
CK+GR+ G + +L+ P+ + ++ +I GL R +
Sbjct: 583 CKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDI 642
Query: 105 -----------------EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
EA LF +LR + N+ T NT+I+G+++T A +LF
Sbjct: 643 CTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFAS 702
Query: 148 MASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
++ V EG V++A+++F M++ P+ V+R N+
Sbjct: 703 ISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNE 762
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
A L ++ ++ +T +++D G E R L
Sbjct: 763 IVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 805
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 234 bits (596), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 136/389 (34%), Positives = 212/389 (54%), Gaps = 28/389 (7%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P + SFNIL C LS F +L G P L T+N L++ C RVS
Sbjct: 12 PCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALD 71
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ ++ + PN VTFT+L+ GLC E R++EA AL ++ G +PN TY T+++G+
Sbjct: 72 LFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 127
Query: 134 RTGHTIVALNLF---EEMASGNGEFGV----------EGFVDKAKELFLQMKDENINPDV 180
+ G T+ ALNL EE++ + + +G A+ LF++M+D+ I PD+
Sbjct: 128 KMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDI 187
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY+ +I GFC + W+EA+ LL EM+ + + P+VVTF+ +++ L K G ++ A LL
Sbjct: 188 VTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQE 247
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME----SMGCTHT-------VFSYS 289
MI GV PN NTL+DG C +G++ A E+F +M+ + TH V +Y+
Sbjct: 248 MISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYN 307
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
ILI+G + A LY EM +GI PD V Y+++ L + +++ A ++FD M
Sbjct: 308 ILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK 367
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELF 378
+ + T+ T I G CK + + +ELF
Sbjct: 368 SFSPNIVTFNTLITGYCKAGMVDDGLELF 396
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 167/333 (50%), Gaps = 12/333 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L K+ + +LF + G+FPD+ TY+ +IN FC G+ S +
Sbjct: 150 PDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRL 209
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L +P+ VTF+ LI L E + A L ++ G PNV T NTL++GL
Sbjct: 210 LQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCD 269
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+G AL +F+ M + A F + PDV TY +I G
Sbjct: 270 SGKLKDALEMFKAMQKSMMDI-------DATHAF-----NGVEPDVQTYNILISGLINEG 317
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ EA+ L EM +G+ P+ VT++ +++ LCK ++DEA+++ D M PN +N
Sbjct: 318 KFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFN 377
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+ G+C G V+ ELF M G +Y LI G+ K I G+L ++ EM+S
Sbjct: 378 TLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISS 437
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
G+ PD + + L+ ++++A + +E+Q
Sbjct: 438 GVYPDTITIRNMLTGLWSKEELKKALAMLEELQ 470
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/324 (32%), Positives = 162/324 (50%), Gaps = 39/324 (12%)
Query: 89 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM 148
+F LIK C+ S++ A + F KL G P + T+NTL++GL
Sbjct: 17 SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLC--------------- 61
Query: 149 ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD 208
VE V +A +LF QM P+VVT+T+++ G C EA LL M++
Sbjct: 62 --------VEDRVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVE 109
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG-VRPNAFVYNTLMDGFCLTGRVN 267
G+QPN +T+ I+D +CK G A LL M ++ ++P+ +Y+ ++DG GR
Sbjct: 110 DGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHT 169
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A+ LF+ M+ G + +YS +ING+C + + A L EML + I PDVV ++ L
Sbjct: 170 DAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLI 229
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR----- 382
L + + A L EM GV + T T +DGLC + + +A+E+F+ ++
Sbjct: 230 NALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMD 289
Query: 383 ------ILKCELDIRAYNCLIDGL 400
E D++ YN LI GL
Sbjct: 290 IDATHAFNGVEPDVQTYNILISGL 313
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 234 bits (596), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 136/389 (34%), Positives = 212/389 (54%), Gaps = 28/389 (7%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P + SFNIL C LS F +L G P L T+N L++ C RVS
Sbjct: 12 PCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALD 71
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ ++ + PN VTFT+L+ GLC E R++EA AL ++ G +PN TY T+++G+
Sbjct: 72 LFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 127
Query: 134 RTGHTIVALNLF---EEMASGNGEFGV----------EGFVDKAKELFLQMKDENINPDV 180
+ G T+ ALNL EE++ + + +G A+ LF++M+D+ I PD+
Sbjct: 128 KMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDI 187
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY+ +I GFC + W+EA+ LL EM+ + + P+VVTF+ +++ L K G ++ A LL
Sbjct: 188 VTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQE 247
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME----SMGCTHT-------VFSYS 289
MI GV PN NTL+DG C +G++ A E+F +M+ + TH V +Y+
Sbjct: 248 MISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYN 307
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
ILI+G + A LY EM +GI PD V Y+++ L + +++ A ++FD M
Sbjct: 308 ILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK 367
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELF 378
+ + T+ T I G CK + + +ELF
Sbjct: 368 SFSPNIVTFNTLITGYCKAGMVDDGLELF 396
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 167/333 (50%), Gaps = 12/333 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L K+ + +LF + G+FPD+ TY+ +IN FC G+ S +
Sbjct: 150 PDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRL 209
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L +P+ VTF+ LI L E + A L ++ G PNV T NTL++GL
Sbjct: 210 LQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCD 269
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+G AL +F+ M + A F + PDV TY +I G
Sbjct: 270 SGKLKDALEMFKAMQKSMMDI-------DATHAF-----NGVEPDVQTYNILISGLINEG 317
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ EA+ L EM +G+ P+ VT++ +++ LCK ++DEA+++ D M PN +N
Sbjct: 318 KFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFN 377
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+ G+C G V+ ELF M G +Y LI G+ K I G+L ++ EM+S
Sbjct: 378 TLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISS 437
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
G+ PD + + L+ +++RA + +E+Q
Sbjct: 438 GVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 104/324 (32%), Positives = 162/324 (50%), Gaps = 39/324 (12%)
Query: 89 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM 148
+F LIK C+ S++ A + F KL G P + T+NTL++GL
Sbjct: 17 SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLC--------------- 61
Query: 149 ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD 208
VE V +A +LF QM P+VVT+T+++ G C EA LL M++
Sbjct: 62 --------VEDRVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVE 109
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG-VRPNAFVYNTLMDGFCLTGRVN 267
G+QPN +T+ I+D +CK G A LL M ++ ++P+ +Y+ ++DG GR
Sbjct: 110 DGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHT 169
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A+ LF+ M+ G + +YS +ING+C + + A L EML + I PDVV ++ L
Sbjct: 170 DAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLI 229
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR----- 382
L + + A L EM GV + T T +DGLC + + +A+E+F+ ++
Sbjct: 230 NALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMD 289
Query: 383 ------ILKCELDIRAYNCLIDGL 400
E D++ YN LI GL
Sbjct: 290 IDATHAFNGVEPDVQTYNILISGL 313
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 129/377 (34%), Positives = 206/377 (54%), Gaps = 14/377 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + N++ L K +DT+ ++ + + G P++ TY LI+ C+ G F +
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ P V +T LI+GLC ESRI EA ++F +R G PN++TYNT+++G +
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275
Query: 135 TGHTIVALNLFEEMASGNG------EFGV--EGFVD-----KAKELFLQMKDENINPDVV 181
H AL L+ EM G+G FG+ +G A++ + M + P++
Sbjct: 276 IAHVKKALELYXEML-GDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y +I G+C A + +EA L E+ + P+V T+++++ LC +M+EA LL M
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G PNA YNTL+DG+C G + +A E+ M G + ++S LI+GYCK ++
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A+ LY EM+ KG+ PDVV Y L F+ + AF+L EMQ G+ + +T
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCL 514
Query: 362 IDGLCKNSYIVEAVELF 378
IDGLCK+ I +A++LF
Sbjct: 515 IDGLCKDGRISDAIKLF 531
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/398 (31%), Positives = 192/398 (48%), Gaps = 22/398 (5%)
Query: 18 CSFNILFGCLAKNKHYD---TVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
C L CL K++ +V ++ RL S+ P+++ +LI F +MG V V
Sbjct: 91 CLMRDLIQCLQKSRRSRICCSVFNVLSRLESSKFTPNVF--GVLIIAFSEMGLVEEALWV 148
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ P ++ GL + R ++ + G PNV TY TLI+G R
Sbjct: 149 YYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCR 205
Query: 135 TGHTIVALNLFEEMASGN-------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
G + A LF+EM G G E + +A+ +F M++ + P++
Sbjct: 206 QGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCG-ESRISEAESMFRTMRNSGMLPNLY 264
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY +++ G+C +A L EM+ G+ PNVVTF +++D LCK +M A + L M
Sbjct: 265 TYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDM 324
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
GV PN FVYN L+DG+C G ++ A L +E VF+YSILI G C +
Sbjct: 325 ASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRM 384
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A L EM KG P+ V YNTL + +E+A ++ +M G+ + T+ T
Sbjct: 385 EEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTL 444
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
IDG CK + A+ L+ + I D+ AY LIDG
Sbjct: 445 IDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDG 482
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 193/435 (44%), Gaps = 61/435 (14%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +FD M+ + P V + IL L S+F+ + ++G+ P+LYTYN +++
Sbjct: 213 FRLFDEMIEKKIFPT-VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMD 271
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+CK+ V + +L PN VTF LI GLC ++ A + FG P
Sbjct: 272 GYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVP 331
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASG-------------NGEFGV---------- 157
N+F YN LI+G + G+ AL+L E+ G GV
Sbjct: 332 NIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLL 391
Query: 158 ------------------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
EG ++KA E+ QM ++ I P+++T++++I G+C A
Sbjct: 392 QEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
A L EM+ +G+ P+VV + ++D K+G EA RL M + G+ PN F
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511
Query: 254 NTLMDGFCLTGRVNRAKELFVS-------------MESMGCTHTVFSYSILINGYCKNKE 300
+ L+DG C GR++ A +LF++ ++ C+ Y+ LI G C +
Sbjct: 512 SCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGR 571
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
I A + +M G++PDV + F + L ++ + G+ ++ YR
Sbjct: 572 IFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRV 631
Query: 361 FIDGLCKNSYIVEAV 375
G ++ Y+ A+
Sbjct: 632 LAKGYEESGYLKSAL 646
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 151/330 (45%), Gaps = 31/330 (9%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +N L K + LSL + + PD++TY+ILI C + R+ +
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + F PNAVT+ +LI G C E + +A + +++ G EPN+ T++TLI+G +
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450
Query: 135 TGHTIVALNLFEEM-------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G A+ L+ EM A +G F +G +A L +M++ ++P+V
Sbjct: 451 AGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFK-DGNTKEAFRLHKEMQEAGLHPNVF 509
Query: 182 TYTSVIRGFCYANDWNEAKCLLI-------------EMMDQGVQPNVVTFNVIMDELCKN 228
T + +I G C ++A L + E+ PN V + ++ LC +
Sbjct: 510 TLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTD 569
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G++ +AS+ M G+RP+ F ++ G + L + MG Y
Sbjct: 570 GRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVY 629
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKP 318
+L GY ++ ++ ALS GE G++P
Sbjct: 630 RVLAKGYEESGYLKSALSFCGE----GVQP 655
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 105/259 (40%), Gaps = 15/259 (5%)
Query: 10 MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS 69
++P P + F ++ + L LF+++ PD+ T + ++ +G +
Sbjct: 707 LKPPSPHEILKKVPFIGQKGDQRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALD 766
Query: 70 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
G + I + SLI I A LF + + +V T+ ++I
Sbjct: 767 MGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFDGTQ----KKDVTTWTSMI 822
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRG 189
G G AL LF EM N + + + + + P+ VT+ V+
Sbjct: 823 VGHALHGQAEEALQLFTEMKETNKRA-------RKNKRNGEXESSLVLPNDVTFMGVLMA 875
Query: 190 FCYANDWNEAKCLLIEMM-DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
+A E K M D ++P + F ++D LC+ G + EA + ++++ VRP
Sbjct: 876 CSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEA---YEFILKMPVRP 932
Query: 249 NAFVYNTLMDGFCLTGRVN 267
NA V+ TL+ L G N
Sbjct: 933 NAVVWRTLLGACSLQGDSN 951
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 137/369 (37%), Gaps = 56/369 (15%)
Query: 40 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
F + +GL PD++T ++I + + ++ IL+ PN+ + L KG
Sbjct: 579 FSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGY-E 637
Query: 100 ESRIMEAAALF-----TKLRVFGCEPN------------VFTYNTLINGLYRTG------ 136
ES +++A F L EP V T + Y T
Sbjct: 638 ESGYLKSALSFCGEGVQPLDRVNSEPWGSYTIRSRFQLCVVTEKKECHSSYLTAFGIHSF 697
Query: 137 ------HTIVALNLFEEMASGNGEFGVEG--FVDKAKELFLQMKDENINPDVVTYTSVIR 188
HTI+ E+ G +G +KA +LF QM+ ++ PD+VT T +
Sbjct: 698 VLLWYFHTILKPPSPHEILKKVPFIGQKGDQRPNKALQLFRQMQMDDXQPDIVTVTVALS 757
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
+ + + + +G+ ++ N +++ K G++ A RL D +
Sbjct: 758 ACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFDGT----QKK 813
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
+ + +++ G L G+ A +LF M+ KNK
Sbjct: 814 DVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRAR------------KNKR-------N 854
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD-GVAADTWTYRTFIDGLCK 367
GE S + P+ V + + + VE + F M+ D + + +D LC+
Sbjct: 855 GEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCR 914
Query: 368 NSYIVEAVE 376
+ EA E
Sbjct: 915 AGLLTEAYE 923
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
+ES T VF +LI + + +E AL +Y +M + P + N + L + +
Sbjct: 119 LESSKFTPNVFG--VLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGR 173
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
+ +K++ +M G + + TY T IDG C+ ++A LF + K + Y
Sbjct: 174 FDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTI 233
Query: 396 LIDGL 400
LI GL
Sbjct: 234 LIRGL 238
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/428 (32%), Positives = 226/428 (52%), Gaps = 35/428 (8%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P V F L G + + D V+SL +++ + + Y++ IL+ CF
Sbjct: 65 LFGDMVRSRPLPS-VIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCF 123
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C ++ G+I + F P VTF++L+ GLC E RI EA LF ++ C+PNV
Sbjct: 124 CSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM----CKPNV 179
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGE-----FG--VEGFVD-----KAKELFLQ 170
T+ TL+NGL R G + A+ L + M + +G V+G A L +
Sbjct: 180 VTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRK 239
Query: 171 MKD-ENINPDVVTY-----TSVIRGFCYANDWNEAKCLLIEMMD-QGVQPNVVTFNVIMD 223
M++ +I P+VV + T +I GFC + W+EA+ LL EM++ + + P+VVT+N +++
Sbjct: 240 MEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALIN 299
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
K GK EA L D M+ G+ P+ Y++++DGFC R++ A+ +F M + GC+
Sbjct: 300 AFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 359
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
+ +++ LI GYC+ K ++ + L EM G+ + + Y TL ++ + A L
Sbjct: 360 DIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLL 419
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK-----------CELDIRA 392
EM GV + T T +DGLC N + +A+E+F+ ++ K E D++
Sbjct: 420 QEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQT 479
Query: 393 YNCLIDGL 400
YN LI GL
Sbjct: 480 YNILISGL 487
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 210/457 (45%), Gaps = 69/457 (15%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ MR P SF IL C LS F ++ G P + T++ L++ C R
Sbjct: 104 MEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDR 163
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+S + ++ + PN VTFT+L+ GLC E R++EA AL ++ G +PN TY T
Sbjct: 164 ISEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGT 219
Query: 128 LINGLYRTGHTIVALN-----------------------------------------LFE 146
+++G+ + G T+ ALN L +
Sbjct: 220 IVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQ 279
Query: 147 EMASGN-------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
EM F EG +A+EL+ +M I P +TY+S+I GFC
Sbjct: 280 EMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQ 339
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
N + A+ + M +G P+++TFN ++ C+ ++D+ +LL M + G+ N Y
Sbjct: 340 NRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITY 399
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
TL+ GFC G +N A++L M S G V + + L++G C N +++ AL ++ M
Sbjct: 400 TTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQK 459
Query: 314 K-----------GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
G++PDV YN L L + A +L++EM G+ DT TY + I
Sbjct: 460 SKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVI 519
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
GLCK S + EA ++F ++ ++ + LI+G
Sbjct: 520 HGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 556
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 174/391 (44%), Gaps = 69/391 (17%)
Query: 39 LFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 98
L + L + PD+ TYN LIN F K G+ + +L P+ +T++S+I G C
Sbjct: 278 LQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFC 337
Query: 99 AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE 158
++R+ A +F + GC P++ T+NTLI G R
Sbjct: 338 KQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKR--------------------- 376
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
VD +L +M + + + +TYT++I GFC D N A+ LL EM+ GV PNVVT
Sbjct: 377 --VDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTC 434
Query: 219 NVIMDELCKNGKMD---------------------------------------------- 232
N ++D LC NGK+
Sbjct: 435 NTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFL 494
Query: 233 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
EA L + M G+ P+ YN+++ G C R++ A ++F SM S + V +++ LI
Sbjct: 495 EAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 554
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
NGYCK ++ L L+ EM +GI + + Y TL ++ + A +F EM GV
Sbjct: 555 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVY 614
Query: 353 ADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
DT T R + GL + AV + L++
Sbjct: 615 PDTITIRNMLTGLWSKEELKRAVAMLEDLQM 645
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 169/345 (48%), Gaps = 13/345 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
++D ML R P +++ + K D +F + + G PD+ T+N LI +
Sbjct: 313 LYDEMLP-RGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGY 371
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ RV G +L + + N +T+T+LI G C + A L ++ G PNV
Sbjct: 372 CRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNV 431
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
T NTL++GL G AL +F+ M + +D + + PDV T
Sbjct: 432 VTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD------IDASHPF------NGVEPDVQT 479
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I G + EA+ L EM +G+ P+ +T+N ++ LCK ++DEA+++ D M
Sbjct: 480 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMG 539
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
PN + TL++G+C GRV+ ELF M G +Y LI+G+ K I
Sbjct: 540 SKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNIN 599
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
GAL ++ EM++ G+ PD + + L+ +++RA + +++Q
Sbjct: 600 GALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQ 644
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 90/193 (46%), Gaps = 4/193 (2%)
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
GF +A L +M+ P+V+ F +M + + G++D L M V
Sbjct: 52 GFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPC 111
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
NA+ + LM FC ++ A F + +G TV ++S L++G C I AL L+
Sbjct: 112 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLF 171
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
+M KP+VV + TL L +V A L D M DG+ + TY T +DG+CK
Sbjct: 172 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 227
Query: 369 SYIVEAVELFRTL 381
V A+ L R +
Sbjct: 228 GDTVSALNLLRKM 240
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N + L K D +F + S P++ T+ LIN +CK GRV G +
Sbjct: 510 PDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLEL 569
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R NA+T+ +LI G I A +F ++ G P+ T ++ GL+
Sbjct: 570 FCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWS 629
Query: 135 TGHTIVALNLFEEMASGNG 153
A+ + E++ G
Sbjct: 630 KEELKRAVAMLEDLQMSVG 648
>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 666
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/420 (32%), Positives = 218/420 (51%), Gaps = 31/420 (7%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ +R P + SFNIL C LS F +L G PD+ T+N L++ C R
Sbjct: 132 MEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDR 191
Query: 68 VSHGFVVLGRILRSCF---------------TPNAVTFTSLIKGLCAESRIMEAAALFTK 112
+S + G ++ + F TP +TF +LI GLC E R++EAAAL K
Sbjct: 192 ISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNK 251
Query: 113 LRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGF 160
+ G +V TY T++NG+ + G T ALNL +M + + V +G
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
A+ LF +M ++ I P+V TY +I GFC W++A+ LL +M+++ + P+V+TFN
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
++ K GK+ EA +L D M+ + P+ YN+++ GFC R + AK +F M S
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-- 429
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
V +++ +I+ YC+ K ++ + L E+ +G+ + YNTL E+ + A
Sbjct: 430 --PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LF EM GV DT T + G C+N + EA+ELF +++ K +LD AYN +I G+
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 547
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/409 (32%), Positives = 202/409 (49%), Gaps = 17/409 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+ + +P V +FN L L +L ++ GL D+ TY ++N
Sbjct: 213 LFDQMVEIGLTPV-VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 271
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CKMG +L ++ + P+ V ++++I LC + +A LF+++ G PNV
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
FTYN +I+G G A L +M V EG + +A++L +
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 391
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M I PD VTY S+I GFC N +++AK M D P+VVTFN I+D C+ +
Sbjct: 392 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAK----HMFDLMASPDVVTFNTIIDVYCRAKR 447
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+DE +LL + + G+ N YNTL+ GFC +N A++LF M S G + +I
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L+ G+C+N+++E AL L+ + I D V YN + + + +V+ A+ LF + G
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
V D TY I G C S I +A LF ++ E D YN LI G
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 616
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 180/357 (50%), Gaps = 8/357 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L K+ H+ LF + G+ P+++TYN +I+ FC GR S +
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+ +TF +LI E ++ EA L ++ P+ TYN++I G +
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 135 TGHTIVALNLFEEMASGN--------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
A ++F+ MAS + + VD+ +L ++ + + TY ++
Sbjct: 414 HNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I GFC ++ N A+ L EM+ GV P+ +T N+++ C+N K++EA L +++ +
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+ YN ++ G C +V+ A +LF S+ G V +Y+++I+G+C I A
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 593
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
L+ +M G +PD YNTL + +++++ +L EM+ +G + D +T + D
Sbjct: 594 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 184/395 (46%), Gaps = 48/395 (12%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
FDYM+ RP V N + G + D +SL++++ + ++Y++NILI CFC
Sbjct: 94 FDYMVRSRPFYTAV-DCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFC 152
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
++S + F KL G +P+V
Sbjct: 153 DCHKLSFSL-----------------------------------STFGKLTKLGFQPDVV 177
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
T+NTL++GL AL LF M GF++ A LF QM + + P V+T+
Sbjct: 178 TFNTLLHGLCLEDRISEALALFGYMVE-------TGFLE-AVALFDQMVEIGLTPVVITF 229
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
++I G C EA L+ +M+ +G+ +VVT+ I++ +CK G A LL M +
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
++P+ +Y+ ++D C G + A+ LF M G VF+Y+ +I+G+C
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A L +M+ + I PDV+ +N L + ++ A KL DEM + DT TY + I
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
G CK++ +A +F L D+ +N +ID
Sbjct: 410 GFCKHNRFDDAKHMFD----LMASPDVVTFNTIID 440
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 136/411 (33%), Positives = 216/411 (52%), Gaps = 16/411 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
FD+ + + N L L + K L +++ N P+++T+ ILI+ C
Sbjct: 831 FDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYR--NKLCCSPNMFTFTILIHGLC 888
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPNV 122
+ G + + +L + R N + +IKGLC+ ++ A LF ++ G C P+V
Sbjct: 889 RAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDV 948
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
FTY+T+++ L ++G A L E+M S V G +D+A L +
Sbjct: 949 FTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQR 1008
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M +P++VTY ++I G C +EA LL EM+D G QPNVVT+ V++D CK GK
Sbjct: 1009 MTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGK 1068
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
++A L+++M++ G PN F YN+L+D FC V RA +L SM GC V SY+
Sbjct: 1069 AEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNT 1128
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+I G CK ++ + L +MLS PD+V +NT+ + + ++V+ A++LF+ +Q G
Sbjct: 1129 VIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESG 1188
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTL-RILKCELDIRAYNCLIDGL 400
+ TY + + GLCK+ +A L R + R C DI YN +IDGL
Sbjct: 1189 CTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGL 1239
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 128/434 (29%), Positives = 210/434 (48%), Gaps = 47/434 (10%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP ++N + L+K+ D + L + + G P++++YN +++ FCK RV +
Sbjct: 227 PPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALW 286
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L +++ P+ V++T++I GLC ++ EA + K+ GC+PNV TY TL++G
Sbjct: 287 LLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFC 346
Query: 134 RTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVV 181
R G A+ L +M F +++A ++ M PD +
Sbjct: 347 RVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAI 406
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL--- 238
Y+++I GFC A EA LL +M+ +G +P+V + ++D LCK +D A LL
Sbjct: 407 NYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMS 466
Query: 239 --------------------------------DLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
D+M++ P+ YN+++DG C + R+
Sbjct: 467 IGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRI 526
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
N A LF M + G V +YSI+I+ +CK+ ++ A + M PDVV Y+ L
Sbjct: 527 NDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSAL 586
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
L + V++AF +F EM G A + TY T IDGLCK + + +A E+ +R C
Sbjct: 587 INGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSC 646
Query: 387 ELDIRAYNCLIDGL 400
D Y CLI+GL
Sbjct: 647 TPDSITYTCLINGL 660
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 210/411 (51%), Gaps = 13/411 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M PP V +++ + L K+ D L + + S G P++ TY+ L++
Sbjct: 934 LFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGL 993
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G++ +L R+ RS +PN VT+ ++I G C RI EA L ++ GC+PNV
Sbjct: 994 CKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNV 1053
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
TY L++ + G A+ L E M F + V++A +L
Sbjct: 1054 VTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSS 1113
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + P+VV+Y +VI G C A +E LL +M+ P++VTFN I+D +CK +
Sbjct: 1114 MIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYR 1173
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMGCTHTVFSYS 289
+D A L +L+ + G PN YN+L+ G C + R ++A+ L M GC+ + +Y+
Sbjct: 1174 VDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYN 1233
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
+I+G CK+K ++ A L+ +MLS G+ PD V Y+ + L + ++ A + + M ++
Sbjct: 1234 TVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKN 1293
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G TY T IDG CK + +A+E+ + L D+ ++ ID L
Sbjct: 1294 GFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWL 1344
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 199/399 (49%), Gaps = 13/399 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N + K D L + + G P++ TY +L++ FCK G+ +
Sbjct: 1016 PNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGL 1075
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ ++ + PN T+ SL+ C + + A L + + GC PNV +YNT+I GL +
Sbjct: 1076 VEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCK 1135
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
+ L E+M S N + F VD A ELF +++ P++VT
Sbjct: 1136 ATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVT 1195
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMM-DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y S++ G C + +++A+ LL EM QG P+++T+N ++D LCK+ ++D A +L M
Sbjct: 1196 YNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQM 1255
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G+ P+ Y+ ++ C ++ A + M G +Y LI+G+CK +
Sbjct: 1256 LSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNL 1315
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ AL + +LSKG PDVV ++ L + ++ +A +L + M R G+ DT TY T
Sbjct: 1316 DKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTL 1375
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ G C S +AV+LF +R CE D Y L+ L
Sbjct: 1376 LKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHL 1414
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 196/402 (48%), Gaps = 12/402 (2%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP V S+ + L K D + ++ G P++ TY L++ FC++G +
Sbjct: 294 RGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDG 353
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
++ ++ + PNA+T+ +++ C + + A + + GC P+ Y+T+I+
Sbjct: 354 AVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIIS 413
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKDENINP 178
G + G A +L E+M V +D A+EL + P
Sbjct: 414 GFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAP 473
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
DVV Y+ +I C A EA+ L M+ P+VVT+N ++D LCK+ ++++A L
Sbjct: 474 DVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLF 533
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
D M GV P+ Y+ ++ FC ++ A ++ M+ C V +YS LING CK
Sbjct: 534 DRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKA 593
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
++ A ++ EML G P++V YNTL L +I++VE+A ++ + M++ D+ TY
Sbjct: 594 GTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITY 653
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I+GLC S + EA + R ++ C D Y L+ L
Sbjct: 654 TCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRAL 695
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 189/370 (51%), Gaps = 14/370 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ +L K + + L + + G P+L+TYN L++ FCK V +
Sbjct: 1051 PNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQL 1110
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ PN V++ ++I GLC +++ E L ++ C P++ T+NT+I+ + +
Sbjct: 1111 LSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCK 1170
Query: 135 TGHTIVA---LNLFEEMASGNGEFGVEGFV---------DKAKELFLQM-KDENINPDVV 181
T +A NL +E V D+A+ L +M + + +PD++
Sbjct: 1171 TYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDII 1230
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY +VI G C + + A L ++M+ G+ P+ VT+++++ LCK MDEA+ +L+LM
Sbjct: 1231 TYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELM 1290
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++ G P A Y TL+DGFC TG +++A E+ + S G V ++SI I+ K +
Sbjct: 1291 LKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRL 1350
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A L ML G+ PD V YNTL + E A LF+ M++ G D TY T
Sbjct: 1351 RQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTL 1410
Query: 362 IDGLC-KNSY 370
+ L K SY
Sbjct: 1411 VGHLVDKKSY 1420
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 178/366 (48%), Gaps = 13/366 (3%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G +++ N L+N K + S + + + + VT+++LI G +I+ A
Sbjct: 121 GYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPA 180
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG------------NGE 154
LF ++ G + + + +++ GL G A+ F EM+ NG
Sbjct: 181 YELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMING- 239
Query: 155 FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
+D A L +M D P+V +Y +V+ GFC AN A LL +M+ +G P+
Sbjct: 240 LSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPD 299
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
VV++ +++ LCK ++DEA R++D MIQ G +PN Y TL+DGFC G ++ A EL
Sbjct: 300 VVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVR 359
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
M G +Y+ +++ +C+ ++E A + M+ G PD + Y+T+ +
Sbjct: 360 KMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAG 419
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
++ A L ++M R G D T ID LCK + I A EL R + C D+ AY+
Sbjct: 420 KLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYS 479
Query: 395 CLIDGL 400
LI L
Sbjct: 480 ILIHAL 485
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 184/391 (47%), Gaps = 13/391 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M+ R P V ++ L + D + L +++ G P+ TYN +++ F
Sbjct: 322 VMDKMIQ-RGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVF 380
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ + VL ++++ P+A+ ++++I G C ++ EA L ++ GC P+V
Sbjct: 381 CRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDV 440
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQ 170
+TLI+ L + A L + V + + +A+
Sbjct: 441 ACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDV 500
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M PDVVTY SV+ G C + N+A L M GV P+VVT+++++ CK+
Sbjct: 501 MVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNN 560
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+D A ++L+ M + P+ Y+ L++G C G V++A ++F M GC + +Y+
Sbjct: 561 LDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNT 620
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI+G CK ++E A + M + PD + Y L L ++E A+++ EM+ G
Sbjct: 621 LIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKG 680
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
D TY T + L K + + +L + +
Sbjct: 681 CLPDRMTYGTLLRALQKTNNLELVEQLLKEM 711
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 198/446 (44%), Gaps = 62/446 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+N + L K + L +++ S PD+ T+N +I+ CK RV + +
Sbjct: 1121 PNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYEL 1180
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPNVFTYNTLINGLY 133
I S TPN VT+ SL+ GLC R +A L ++ R GC P++ TYNT+I+GL
Sbjct: 1181 FNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLC 1240
Query: 134 RTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
++ A LF +M S F+D+A + M +P +
Sbjct: 1241 KSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAI 1300
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY ++I GFC + ++A +L ++ +G P+VVTF++ +D L K G++ +A LL+ M
Sbjct: 1301 TYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETM 1360
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI--------- 292
++ G+ P+ YNTL+ GFC A +LF M GC +Y+ L+
Sbjct: 1361 LRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSY 1420
Query: 293 -------------NGYCKNKEIEGALSLYGE-------------MLSKGIKP-------- 318
G+ N E+ L E M K P
Sbjct: 1421 KDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFE 1480
Query: 319 -----DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+VV+++ + V Q E+AF L+ M +GV D T+ + + C +
Sbjct: 1481 GMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDA 1540
Query: 374 AVELFRTL-RILKCELDIRAYNCLID 398
AV+ F ++ R E + ++C+ID
Sbjct: 1541 AVDEFVSISRDYGLEPGVDHFSCVID 1566
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 161/345 (46%), Gaps = 12/345 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N + + + + + + TG PD Y+ +I+ FCK G++ +
Sbjct: 368 PNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDL 427
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++R P+ ++LI LC + I A L C P+V Y+ LI+ L +
Sbjct: 428 LEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCK 487
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
A + + M V + ++ A LF +M+ + PDVVT
Sbjct: 488 AKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVT 547
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+ VI FC N+ + A +L M + P+VVT++ +++ LCK G +D+A + M+
Sbjct: 548 YSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEML 607
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G PN YNTL+DG C +V +A E+ M CT +Y+ LING C +E
Sbjct: 608 GCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLE 667
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
A + EM KG PD + Y TL L + + +E +L EM+
Sbjct: 668 EAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEME 712
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 129/281 (45%), Gaps = 14/281 (4%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V + L L K D+ L + PD+ Y+ILI+ CK R+
Sbjct: 434 RGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPE 493
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
L ++++ P+ VT+ S++ GLC RI +A LF ++R G P+V TY+ +I+
Sbjct: 494 AESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIH 553
Query: 131 GLYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENIN 177
+ + A + E M NG G VDKA ++F +M
Sbjct: 554 SFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALING-LCKAGTVDKAFDVFQEMLGCGCA 612
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P++VTY ++I G C N +A +L M Q P+ +T+ +++ LC +++EA R+
Sbjct: 613 PNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRV 672
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
L M G P+ Y TL+ T + ++L ME+
Sbjct: 673 LREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEA 713
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 130/290 (44%), Gaps = 31/290 (10%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
+L + S P V +F+I L+K L + + GL PD TYN L+ FC
Sbjct: 1324 LLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCD-A 1382
Query: 67 RVSHGFVVLGRILRSC-FTPNAVTFTSLI---------KGLCAE-SRIMEAAA------L 109
++ V L ++R C P+ T+T+L+ K L AE S+ M L
Sbjct: 1383 SLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHEL 1442
Query: 110 FTKLRV-FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN-----GEFGVEGFVDK 163
+KL E +V +++ + G A +FE M N GV F +
Sbjct: 1443 SSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQ 1502
Query: 164 AKE---LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM-MDQGVQPNVVTFN 219
++ L+ M E + PD VT+ S++ C+A + A + + D G++P V F+
Sbjct: 1503 EEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFS 1562
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
++D L + G ++EA DLM+ + +P+A +N L+ + + G RA
Sbjct: 1563 CVIDLLGRLGLVNEAE---DLMLGMPCKPSAATWNCLLSAYKICGDFERA 1609
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 127/369 (34%), Positives = 207/369 (56%), Gaps = 13/369 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ +L P+PP + FN + G L K+KHY TVL L K++ G+ P+L NILINCF
Sbjct: 74 LFNCLLRQNPTPPAI-EFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCF 132
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C++G + F V +IL+ + PN +TFT+LIKGLC + +I +A KL G + N
Sbjct: 133 CQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQ 192
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
+Y TLI+GL + G T AL+L + + V + V+ A +L+ +
Sbjct: 193 ISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSE 252
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + I+P+VVTY+++I GF +A L +M+ + ++P+V TFN+++D CK+GK
Sbjct: 253 MVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGK 312
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ A +L+D M G PN Y++++D C T RV++A L ++ G + +Y+I
Sbjct: 313 ISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTI 372
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI+G C + ++E A +++ ++L KG VV Y +F + + A L +M+ +G
Sbjct: 373 LIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENG 432
Query: 351 VAADTWTYR 359
D TY
Sbjct: 433 CIPDAKTYE 441
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 173/372 (46%), Gaps = 30/372 (8%)
Query: 29 KNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 88
KN H++ + ++N L Y+ F V + +LR TP A+
Sbjct: 36 KNTHFNFIPCSSSKIN-------LIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAI 88
Query: 89 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM 148
F ++ L L K+ G +PN+ N LIN + G A ++F ++
Sbjct: 89 EFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKI 148
Query: 149 ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD 208
L+M NP+ +T+T++I+G C ++A +++
Sbjct: 149 --------------------LKM---GYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVA 185
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
G Q N +++ ++D LCK G+ A LL + V+PN +Y+T++DG C VN
Sbjct: 186 LGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVND 245
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
A +L+ M S G + V +YS LI+G+ +++ A+ L+ +M+S+ IKPDV +N L
Sbjct: 246 AFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVD 305
Query: 329 VLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
V + ++ A KL DEM G + TY + +D LCK + +AV L L+
Sbjct: 306 VFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRP 365
Query: 389 DIRAYNCLIDGL 400
++ Y LIDGL
Sbjct: 366 NMHTYTILIDGL 377
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/415 (33%), Positives = 217/415 (52%), Gaps = 26/415 (6%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ +R P + SFNIL C LS F +L G PD+ T+N L++ C R
Sbjct: 132 MEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDR 191
Query: 68 VSHGFVVLGRILRSC----------FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 117
+S + G ++ + TP +TF +LI GLC E R++EAAAL K+ G
Sbjct: 192 ISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 251
Query: 118 CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAK 165
+V TY T++NG+ + G T ALNL +M + + V +G A+
Sbjct: 252 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 311
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
LF +M ++ I P+V TY +I GFC W++A+ LL +M+++ + P+V+TFN ++
Sbjct: 312 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISAS 371
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
K GK+ EA +L D M+ + P+ YN+++ GFC R + AK +F M S V
Sbjct: 372 VKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDV 427
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
+++ +I+ YC+ K ++ + L E+ +G+ + YNTL E+ + A LF E
Sbjct: 428 VTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQE 487
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
M GV DT T + G C+N + EA+ELF +++ K +LD AYN +I G+
Sbjct: 488 MISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 542
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/409 (32%), Positives = 202/409 (49%), Gaps = 17/409 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+ + +P V +FN L L +L ++ GL D+ TY ++N
Sbjct: 208 LFDQMVEIGLTPV-VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 266
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CKMG +L ++ + P+ V ++++I LC + +A LF+++ G PNV
Sbjct: 267 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 326
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
FTYN +I+G G A L +M V EG + +A++L +
Sbjct: 327 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 386
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M I PD VTY S+I GFC N +++AK M D P+VVTFN I+D C+ +
Sbjct: 387 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAK----HMFDLMASPDVVTFNTIIDVYCRAKR 442
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+DE +LL + + G+ N YNTL+ GFC +N A++LF M S G + +I
Sbjct: 443 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 502
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L+ G+C+N+++E AL L+ + I D V YN + + + +V+ A+ LF + G
Sbjct: 503 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 562
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
V D TY I G C S I +A LF ++ E D YN LI G
Sbjct: 563 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 611
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 180/357 (50%), Gaps = 8/357 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L K+ H+ LF + G+ P+++TYN +I+ FC GR S +
Sbjct: 289 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 348
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+ +TF +LI E ++ EA L ++ P+ TYN++I G +
Sbjct: 349 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 408
Query: 135 TGHTIVALNLFEEMASGN--------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
A ++F+ MAS + + VD+ +L ++ + + TY ++
Sbjct: 409 HNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 468
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I GFC ++ N A+ L EM+ GV P+ +T N+++ C+N K++EA L +++ +
Sbjct: 469 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 528
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+ YN ++ G C +V+ A +LF S+ G V +Y+++I+G+C I A
Sbjct: 529 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 588
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
L+ +M G +PD YNTL + +++++ +L EM+ +G + D +T + D
Sbjct: 589 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 645
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 182/395 (46%), Gaps = 53/395 (13%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
FDYM+ RP V N + G + D +SL++++ + ++Y++NILI CFC
Sbjct: 94 FDYMVRSRPFYTAV-DCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFC 152
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
++S + F KL G +P+V
Sbjct: 153 DCHKLSFSL-----------------------------------STFGKLTKLGFQPDVV 177
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
T+NTL++GL AL LF G++ + LF QM + + P V+T+
Sbjct: 178 TFNTLLHGLCLEDRISEALALF-------------GYMVETGSLFDQMVEIGLTPVVITF 224
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
++I G C EA L+ +M+ +G+ +VVT+ I++ +CK G A LL M +
Sbjct: 225 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 284
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
++P+ +Y+ ++D C G + A+ LF M G VF+Y+ +I+G+C
Sbjct: 285 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 344
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A L +M+ + I PDV+ +N L + ++ A KL DEM + DT TY + I
Sbjct: 345 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 404
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
G CK++ +A +F L D+ +N +ID
Sbjct: 405 GFCKHNRFDDAKHMFD----LMASPDVVTFNTIID 435
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 133/433 (30%), Positives = 224/433 (51%), Gaps = 59/433 (13%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F +M+ RP P + F+ L ++K K YD V+ L++++ G+ +L T NIL+NCF
Sbjct: 68 LFFHMVQCRP-LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ ++S LG++++ P+ VTF SL+ G C R+ +A +F ++ G +PNV
Sbjct: 127 CRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNV 186
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
YNT+I+GL ++ VD A +L +M+ + I PDVVT
Sbjct: 187 VIYNTIIDGLCKSKQ-----------------------VDNALDLLNRMEKDGIGPDVVT 223
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S+I G C + W++A ++ M + + P+V TFN ++D K G++ EA + MI
Sbjct: 224 YNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMI 283
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ + P+ Y+ L+ G C+ R++ A+E+F M S GC V +YSILINGYCK+K++E
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343
Query: 303 GALSLYGEMLSK-----------------------------------GIKPDVVIYNTLF 327
+ L+ EM + G+ P+++ YN L
Sbjct: 344 HGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLL 403
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
L + ++E+A + +MQ++G+ AD TY I G+CK + +A +++ +L
Sbjct: 404 HGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLM 463
Query: 388 LDIRAYNCLIDGL 400
DI Y ++ GL
Sbjct: 464 PDIWTYTTMMLGL 476
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 172/349 (49%), Gaps = 12/349 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +F L + L +F ++ G P++ YN +I+ CK +V + +
Sbjct: 149 PSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDL 208
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R+ + P+ VT+ SLI GLC+ R +A + + + P+VFT+N LI+ +
Sbjct: 209 LNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVK 268
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
G A +EEM + + + + +D+A+E+F M + PDVVT
Sbjct: 269 EGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVT 328
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+ +I G+C + L EM +GV N VT+ +++ C+ GK++ A + M+
Sbjct: 329 YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
GV PN YN L+ G C G++ +A + M+ G + +Y+I+I G CK E+
Sbjct: 389 FCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVA 448
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
A +Y + +G+ PD+ Y T+ + L++ A LF +M+ DG+
Sbjct: 449 DAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGI 497
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 163/330 (49%), Gaps = 15/330 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+ M P V +N + L K+K D L L R+ G+ PD+ TYN LI+
Sbjct: 173 MFDQMVGM-GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL 231
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C GR S ++ + + P+ TF +LI E R+ EA + ++ +P++
Sbjct: 232 CSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDI 291
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG--------VEGF-----VDKAKELFL 169
TY+ LI GL A +F M S G F + G+ V+ +LF
Sbjct: 292 VTYSLLIYGLCMYSRLDEAEEMFGFMVS-KGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M + + VTYT +I+G+C A N A+ + M+ GV PN++T+NV++ LC NG
Sbjct: 351 EMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNG 410
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+++A +L M + G+ + YN ++ G C G V A +++ S+ G +++Y+
Sbjct: 411 KIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYT 470
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
++ G K A +L+ +M GI P+
Sbjct: 471 TMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 115/240 (47%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D + +LF M P + ++ ++ ++ L +M G+ N+ T N+
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C+ ++ A L MI++G P+ + +L++GFC RV A +F M MG
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
V Y+ +I+G CK+K+++ AL L M GI PDVV YN+L L + A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++ M + + D +T+ ID K + EA E + + + DI Y+ LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 4/181 (2%)
Query: 224 ELCKNG----KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
E+ +NG K+D++ L M+Q P+ ++ L+ + + L+ M+ +
Sbjct: 51 EMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQML 110
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G H + + +IL+N +C+ ++ ALS G+M+ G +P +V + +L +V A
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+FD+M G + Y T IDGLCK+ + A++L + D+ YN LI G
Sbjct: 171 LYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230
Query: 400 L 400
L
Sbjct: 231 L 231
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 143/424 (33%), Positives = 213/424 (50%), Gaps = 27/424 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAK-------NKHYDTVLSLFKRLN---STGLFPDL 52
+FD +L P V +FN L +++ + V+SLF R+ + + PD
Sbjct: 36 LFDGLLT-HARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVTPDP 94
Query: 53 YTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 112
TY+ILI CFC+MGR+ HGF G IL+S + N + L+KGLC R+ EA + K
Sbjct: 95 CTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDILVK 154
Query: 113 -LRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE---------------FG 156
+ GC P+V +YNTL+ G AL L MA G F
Sbjct: 155 RMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFF 214
Query: 157 VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
EG VDKA LFL+M D I P+VVTYT+VI G C A + A+ + +M+D+GV+P+
Sbjct: 215 TEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDND 274
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
T+N ++ GK E R+L+ M G++P+ + Y +L++ C GR A+ LF SM
Sbjct: 275 TYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSM 334
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
G V Y ILI+GY + L M+ G+ PD I+N +F + +
Sbjct: 335 IRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMI 394
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
+ A +F++M++ G++ D Y ID LCK + +AV F + +I +N L
Sbjct: 395 DEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSL 454
Query: 397 IDGL 400
+ GL
Sbjct: 455 VYGL 458
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 203/410 (49%), Gaps = 13/410 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M++ P ++ G L+ K + V+ + + +++ GL PD YTY L+N
Sbjct: 260 VFQQMIDKGVKPDNDTYNCLIHGYLSIGK-WKEVVRMLEEMSAHGLKPDCYTYGSLLNYL 318
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C GR + ++R PN + LI G + + E L + G P+
Sbjct: 319 CNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDH 378
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQ 170
+N + + A+++F +M V G VD A F Q
Sbjct: 379 HIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQ 438
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M +E + P++ + S++ G C + W +AK EM++QG++P+VV FN I+ LC G+
Sbjct: 439 MMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQ 498
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ +A RL+DLM ++G RP Y TL+ G CL GR++ A + M S+G ++Y+
Sbjct: 499 VMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNT 558
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L++GYC+ I+ A ++ EML GI P VV Y+T+ LF + A +L+ M G
Sbjct: 559 LLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSG 618
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ W Y ++GL KN+ + EA +LF++L +L+I +N +I L
Sbjct: 619 KQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGAL 668
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 182/381 (47%), Gaps = 23/381 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FNI+F AK D + +F ++ GL PD+ Y LI+ CK+GRV + +++
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMM 440
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
PN F SL+ GLC + +A + ++ G P+V +NT++ L G +
Sbjct: 441 NEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVM 500
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
KA+ L M+ P V++YT++I G C +EA
Sbjct: 501 -----------------------KAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEA 537
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
L M+ G++P+ T+N ++ C+ G++D+A + M++ G+ P Y+T++ G
Sbjct: 538 AKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHG 597
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
T R + AKEL+++M + G ++ Y+I++NG KN ++ A L+ + SK + +
Sbjct: 598 LFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLE 657
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
+ +N + LF+ + E A LF + G+ D +TY + L + Y+ E +LF
Sbjct: 658 ITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFS 717
Query: 380 TLRILKCELDIRAYNCLIDGL 400
+ + R N L+ L
Sbjct: 718 AMEKSGTTPNSRMLNALVRRL 738
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 191/395 (48%), Gaps = 25/395 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+ + P V + IL A + L + GL PD + +NI+ +
Sbjct: 330 LFDSMIR-KGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K + + ++ + +P+ V + +LI LC R+ +A F ++ G PN+
Sbjct: 389 AKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNI 448
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
F +N+L+ GL ++ +E KAKE + +M ++ I PDVV
Sbjct: 449 FVFNSLVYGL-------CTVDKWE----------------KAKEFYFEMLNQGIRPDVVF 485
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ +++ C +A+ L+ M G +P V+++ ++ C G++DEA++ LD+M+
Sbjct: 486 FNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVML 545
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+G++P+ + YNTL+ G+C GR++ A +F M G T V +YS +++G +
Sbjct: 546 SVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFS 605
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A LY M++ G + ++ IYN + L + + V+ AFKLF + + T+ I
Sbjct: 606 EAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMI 665
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
L K+ +A+ LF T+ D+ Y CLI
Sbjct: 666 GALFKSGRNEDAMHLFATISSYGLVPDVFTY-CLI 699
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 141/400 (35%), Positives = 210/400 (52%), Gaps = 16/400 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L K + ++ + + G+ PD+ TY++L++ FCK RV +
Sbjct: 393 PNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALEL 452
Query: 75 L-GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV-FGCEPNVFTYNTLINGL 132
L G R C TPN VTF S+I GLC R EA +F + + G P+ TY TLI+GL
Sbjct: 453 LHGMASRGC-TPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGL 511
Query: 133 YRTGHTIVALNLFEEMASG---------NGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
+RTG A L + M NG G V +A +++ +M + + PD VT+
Sbjct: 512 FRTGRAGQAEALLDAMPDPDTYAFNCCING-LSKLGDVSRALQVYNRMLELELVPDKVTF 570
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
+I G C A ++ +A L EM+ + +QP+V+TF ++D LCK G+++ A +LDLM
Sbjct: 571 NILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 630
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
+GV PN YN L+ G C +GR+ A + M S GC +Y L+ C+ +
Sbjct: 631 LGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDD 690
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
AL L E+ S G PD V YN L L++ Q E+A + +EM G D TY T ID
Sbjct: 691 ALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLID 750
Query: 364 GLCKNSYIVEAVELFRTL--RILKCEL-DIRAYNCLIDGL 400
LCK + EA L + R+ +C + ++ Y+ LI+GL
Sbjct: 751 SLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGL 790
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 136/442 (30%), Positives = 217/442 (49%), Gaps = 61/442 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +F L L K + + + + G+ P++ TYN L++ CK GR+
Sbjct: 600 PDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQF 659
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ S P+++T+ SL+ LC SR +A L ++L+ FG +P+ TYN L++GL++
Sbjct: 660 LEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWK 719
Query: 135 TGHTIVALNLF----------------------------EEMASGNGEFGVE-------- 158
+G T A+ + EE +G+
Sbjct: 720 SGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPN 779
Query: 159 --------------GFVDKAKELFLQM--KDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
G +D+A+EL +M K ++ P+++TY S + G C + EA C
Sbjct: 780 VVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEA-CE 838
Query: 203 LIEMMDQG---VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
L+ + G V P+ VTF+ ++D LCK G+ DEA + D MI G PN YN LM+G
Sbjct: 839 LMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNG 898
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
C T ++ RA + SM G T V +YS+L++ +CK ++ AL L M S+G P+
Sbjct: 899 LCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPN 958
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQ-RDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
VV +N++ L + Q AF++FD+M + G+A D TY T IDGL + + +A L
Sbjct: 959 VVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLL 1018
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
+ + D A+NC I+GL
Sbjct: 1019 DAMP----DPDTYAFNCCINGL 1036
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 122/390 (31%), Positives = 194/390 (49%), Gaps = 32/390 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N + L K+ + LF+ L G PD+ TYN LI+ CK G + +
Sbjct: 214 PTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRL 273
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE--PNVFTYNTLINGL 132
G + PN VT++ LI GLC RI EA L ++ C+ PN+ TYN+ ++GL
Sbjct: 274 HGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGL 333
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ T A L + G+ ++PD VT++++I G C
Sbjct: 334 CKQSMTAEACELMRSLRDGS---------------------LRVSPDTVTFSTLIDGLCK 372
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
+EA + +M+ G PNV+T+N +++ LCK KM+ A +++ M+ GV P+
Sbjct: 373 CGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVIT 432
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM- 311
Y+ L+D FC RV+ A EL M S GCT V +++ +I+G CK+ A ++ +M
Sbjct: 433 YSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMA 492
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
L G+ PD + Y TL LF + +A L D M DT+ + I+GL K +
Sbjct: 493 LKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD----PDTYAFNCCINGLSKLGDV 548
Query: 372 VEAVELFRTLRILKCEL--DIRAYNCLIDG 399
A++++ R+L+ EL D +N LI G
Sbjct: 549 SRALQVYN--RMLELELVPDKVTFNILIAG 576
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/423 (29%), Positives = 197/423 (46%), Gaps = 61/423 (14%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++NIL L K+ + +++ + + G PD+ TYN LI+ CK G + +
Sbjct: 705 PDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRL 764
Query: 75 LG----RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE--PNVFTYNTL 128
G R+ R C PN VT++ LI GLC RI EA L ++ C+ PN+ TYN+
Sbjct: 765 HGDMSSRVSRCCV-PNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSF 823
Query: 129 INGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDEN--INPDVVTYTSV 186
++GL + + + +A EL ++D + ++PD VT++++
Sbjct: 824 LDGLCK-----------------------QSMMAEACELMRSLRDGSLRVSPDTVTFSTL 860
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G C +EA + +M+ G PNVVT+NV+M+ LCK KM+ A +++ M+ GV
Sbjct: 861 IDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGV 920
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+ Y+ L+D FC V+ A EL M S GCT V +++ +I+G CK+ + A
Sbjct: 921 TPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQ 980
Query: 307 LYGEM-LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA------------ 353
++ +M L G+ PD + Y TL LF +A L D M A
Sbjct: 981 MFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLG 1040
Query: 354 ----------------DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
D T+ I G CK +A LF + + D+ + LI
Sbjct: 1041 DVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALI 1100
Query: 398 DGL 400
DGL
Sbjct: 1101 DGL 1103
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/377 (32%), Positives = 191/377 (50%), Gaps = 27/377 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNST---GLFPDLYTYNILINCFCKMGRVSHG 71
P V ++N L L K + L ++S P++ TY++LIN CK+GR+
Sbjct: 740 PDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEA 799
Query: 72 FVVLGRILR-SC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKLR--VFGCEPNVFTYNT 127
++ ++R SC PN +T+ S + GLC +S + EA L LR P+ T++T
Sbjct: 800 RELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFST 859
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDEN 175
LI+GL + G T A N+F++M +G V + +++A + M D+
Sbjct: 860 LIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKG 919
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+ PDV+TY+ ++ FC A+ +EA LL M +G PNVVTFN I+D LCK+ + EA
Sbjct: 920 VTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAF 979
Query: 236 RLLDLM-IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
++ D M ++ G+ P+ Y TL+DG TG +A+ L +M ++++ ING
Sbjct: 980 QMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPD----PDTYAFNCCING 1035
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
K ++ AL ML + PD V +N L + E+A LF+EM + D
Sbjct: 1036 LSKLGDVSRALH---RMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPD 1092
Query: 355 TWTYRTFIDGLCKNSYI 371
T+ IDGLCK +
Sbjct: 1093 VMTFGALIDGLCKAGQV 1109
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 184/390 (47%), Gaps = 35/390 (8%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG---RVSHGFVVL 75
SFN L K+ + LF+ P+ +TY+ L+ K G + GF
Sbjct: 113 SFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFFRR 172
Query: 76 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT-KLRVFGCEPNVFTYNTLINGLYR 134
R + + +++ LC A +F ++ G P + TYNT+INGL +
Sbjct: 173 IRSSSR----SVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCK 228
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ + LFEE+ + +PDVVTY ++I C A
Sbjct: 229 SNELGAGMELFEELV-----------------------ERGHHPDVVTYNTLIDSLCKAG 265
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG--VRPNAFV 252
D EA+ L +M + PNVVT++V+++ LCK G++DEA L+ M + V PN
Sbjct: 266 DLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIIT 325
Query: 253 YNTLMDGFCLTGRVNRAKELFVSME--SMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
YN+ +DG C A EL S+ S+ + ++S LI+G CK +I+ A S++ +
Sbjct: 326 YNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDD 385
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M++ G P+V+ YN L L + ++ERA + + M GV D TY +D CK S
Sbjct: 386 MIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASR 445
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ EA+EL + C ++ +N +IDGL
Sbjct: 446 VDEALELLHGMASRGCTPNVVTFNSIIDGL 475
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 133/271 (49%), Gaps = 21/271 (7%)
Query: 9 NMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV 68
++R SP V +F+ L L K D ++F + + G P++ TYN+L+N CK ++
Sbjct: 847 SLRVSPDTV-TFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKM 905
Query: 69 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTL 128
++ ++ TP+ +T++ L+ C S + EA L + GC PNV T+N++
Sbjct: 906 ERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSI 965
Query: 129 INGLYRTGHTIVALNLFEEMASGNGEFGVE-------------GFVDKAKELFLQMKDEN 175
I+GL ++ + A +F++M +G + G+ +A+ L M D
Sbjct: 966 IDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPD-- 1023
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
PD + I G D + A L M++ + P+ VTFN+++ CK G ++AS
Sbjct: 1024 --PDTYAFNCCINGLSKLGDVSRA---LHRMLELELVPDKVTFNILIAGACKAGNFEQAS 1078
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
L + M+ ++P+ + L+DG C G+V
Sbjct: 1079 ALFEEMVAKNLQPDVMTFGALIDGLCKAGQV 1109
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 121/226 (53%), Gaps = 10/226 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N+L L K + ++ + + G+ PD+ TY++L++ FCK V +
Sbjct: 887 PNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALEL 946
Query: 75 L-GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV-FGCEPNVFTYNTLINGL 132
L G R C TPN VTF S+I GLC + EA +F + + G P+ TY TLI+GL
Sbjct: 947 LHGMASRGC-TPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGL 1005
Query: 133 YRTGHTIVALNLFEEMASGNGEF------GVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
+RTG A L + M + G+ D ++ L +M + + PD VT+ +
Sbjct: 1006 FRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALH-RMLELELVPDKVTFNIL 1064
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 232
I G C A ++ +A L EM+ + +QP+V+TF ++D LCK G+++
Sbjct: 1065 IAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 1110
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 100/228 (43%), Gaps = 37/228 (16%)
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL------------- 256
G + + +FN ++ L K+G +A L + RPN F Y+TL
Sbjct: 106 GFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVER 165
Query: 257 ---------------------MDGFCLTGRVNRAKELFVS-MESMGCTHTVFSYSILING 294
+ C G RA E+F M G T+ +Y+ +ING
Sbjct: 166 TLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIING 225
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
CK+ E+ + L+ E++ +G PDVV YNTL L + +E A +L +M +
Sbjct: 226 LCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPN 285
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL--DIRAYNCLIDGL 400
TY I+GLCK I EA EL + + C++ +I YN +DGL
Sbjct: 286 VVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGL 333
>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 493
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 131/394 (33%), Positives = 208/394 (52%), Gaps = 24/394 (6%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M RP P + F+ L +AK K Y+ V+SLF+ + G+ DLY+++ LI+CFC+
Sbjct: 64 MAESRP-LPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCS 122
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
R+S LG++++ F P+ VTF SL+ G C +RI EA +L ++ G EPNV YN
Sbjct: 123 RLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYN 182
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
T+I+ L VD A ++ M+ I PDV+TY S+
Sbjct: 183 TIIDSLCENRQ-----------------------VDTALDVLNHMEKMGIRPDVITYNSL 219
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I ++ W + +L +MM G+ P+V+TF+ ++D K G++ EA + D MIQ V
Sbjct: 220 ITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSV 279
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
PN YN+L++G C+ G ++ AK++ M S G +Y+ L+NGYCK+K ++ A+
Sbjct: 280 DPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMK 339
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
+ M G+ D YNTL+ + Q A K+ M GV D +T+ +DGLC
Sbjct: 340 ILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLC 399
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++ I +A+ L+ + + I YN +I G+
Sbjct: 400 EHGKIEKALVKLEDLQKSETVVGIITYNIIIKGM 433
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 108/216 (50%)
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +R ++ +N+A L +M + P++V F+ ++ + K K + L +
Sbjct: 41 YRERLRSGLHSIKFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIE 100
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+G+ + + ++TL+D FC R++ A M +G ++ ++ L+NG+C I+
Sbjct: 101 ILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQ 160
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+SL +++ G +P+VVIYNT+ L E QV+ A + + M++ G+ D TY + I
Sbjct: 161 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLI 220
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
L + + + + + D+ ++ +ID
Sbjct: 221 TRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMID 256
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 73/135 (54%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N L+ + ++ + R+ S G+ PD+YT+N+L++ C+ G++ V L +
Sbjct: 355 TYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDL 414
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+S +T+ +IKG+C +++ +A LF L + G P+V TY T++ GL R
Sbjct: 415 QKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLW 474
Query: 139 IVALNLFEEMASGNG 153
+ A L+ +M +G
Sbjct: 475 LEAHELYRKMKKDDG 489
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 122/330 (36%), Positives = 193/330 (58%), Gaps = 12/330 (3%)
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
P VTF +L+ GLC++++IM+A LF ++ G EP+V TY+T+INGL + G+T +AL
Sbjct: 6 LQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMAL 65
Query: 143 NLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSVIRGF 190
L ++M + V + V +A + F +M E I PDV TY+S++ GF
Sbjct: 66 QLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGF 125
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C NEA L +M+++ V PN VTF +++D LCK + EA + + M + G+ P+
Sbjct: 126 CNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDV 185
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
+ YN L+DG+C +++ A++LF M+ GC V SY+ILING+CK+ I+ A L E
Sbjct: 186 YTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAE 245
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M K + PD+ Y+TL ++ + + A +L EM G+ + TY +DGLCK+ +
Sbjct: 246 MSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGH 305
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ EA EL + ++ K E +I Y LI+G+
Sbjct: 306 LDEAFELLKAMQESKIEPNIFIYTILIEGM 335
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 117/361 (32%), Positives = 189/361 (52%), Gaps = 12/361 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + L K++ + F + G+ PD++TY+ +++ FC +GRV+ +
Sbjct: 78 PNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSL 137
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ PN VTFT LI GLC + I EA +F + G EP+V+TYN L++G
Sbjct: 138 FKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCS 197
Query: 135 TGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKDENINPDVVT 182
A LF M V G +D+AK L +M +++ PD+ T
Sbjct: 198 RSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFT 257
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y++++RGFC EA+ LL EM G+ PN++T+++++D LCK+G +DEA LL M
Sbjct: 258 YSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQ 317
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ + PN F+Y L++G C G++ A+ELF ++ G TV +Y+++I+G K
Sbjct: 318 ESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSN 377
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ EM G P+ YN + A +L +EM G +AD+ T+R
Sbjct: 378 EACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRMLS 437
Query: 363 D 363
D
Sbjct: 438 D 438
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/398 (31%), Positives = 205/398 (51%), Gaps = 14/398 (3%)
Query: 15 PPVCSFNILF-GCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P + +FN L G +K K D V LF + G PD+ TY+ +IN CKMG +
Sbjct: 8 PTLVTFNTLLSGLCSKAKIMDAV-KLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQ 66
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L ++ PN V + ++I LC + + EA F+++ G P+VFTY+++++G
Sbjct: 67 LLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFC 126
Query: 134 RTGHTIVALNLFEEMASGNG-------EFGVEGF-----VDKAKELFLQMKDENINPDVV 181
G A +LF++M N ++G + +A +F M ++ + PDV
Sbjct: 127 NLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVY 186
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY +++ G+C + +EA+ L M +G PNV ++N++++ CK+G++DEA LL M
Sbjct: 187 TYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEM 246
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ P+ F Y+TLM GFC GR A+EL M S G + +YSI+++G CK+ +
Sbjct: 247 SHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHL 306
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A L M I+P++ IY L + ++E A +LF + G+ TY
Sbjct: 307 DEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVM 366
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I GL K EA ELFR + + C + YN +I G
Sbjct: 367 ISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQG 404
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 106/194 (54%)
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M G+QP +VTFN ++ LC K+ +A +L D M+++G P+ Y+T+++G C G
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
A +L ME GC V +Y+ +I+ CK++ + A+ + EM+ +GI PDV Y++
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
+ + +V A LF +M V + T+ IDGLCK I EA +F T+
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180
Query: 386 CELDIRAYNCLIDG 399
E D+ YN L+DG
Sbjct: 181 LEPDVYTYNALVDG 194
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%)
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M G++P +V +NTL L ++ A KLFDEM + G D TY T I+GLCK
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
A++L + + C+ ++ AYN +ID L
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSL 90
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 144/414 (34%), Positives = 216/414 (52%), Gaps = 20/414 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IFD + R P V ++N L K D + +R+ S L PD+ TYN L+N
Sbjct: 142 IFDGAVK-RGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGL 200
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPN 121
CK GRV ++ I+ F+PN +T+++LI GLC E R +E+A L K+ + GC+P+
Sbjct: 201 CKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPD 257
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFL 169
+ +YN LI+GL R AL LF + E V E V++A ELF
Sbjct: 258 IVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFS 317
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+ + PD +TYT I G C A +A +L +M ++G P+VV+ N +++ LCK
Sbjct: 318 GLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEK 377
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
++DEA LL M G PNA +NTL+ G C G+ +A F M G TV +Y+
Sbjct: 378 RVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYN 437
Query: 290 ILINGYCKNKE---IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
IL++G CK ++ I+ A++L+ M+ KG PDVV Y+ L L + +++ A +L M
Sbjct: 438 ILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAM 497
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ G + +TY + I GLC + EA+ELF + C D Y +I L
Sbjct: 498 EAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISAL 551
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 119/368 (32%), Positives = 196/368 (53%), Gaps = 26/368 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S+N L LA+ + L LF + G P++ TYNILI+ K RV+ F +
Sbjct: 256 PDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFEL 315
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ P+A+T+T I GLC R+ +A + + GC P+V ++N +INGL +
Sbjct: 316 FSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCK 375
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
E VD+A+ L M+ + +P+ +++ ++I G C A
Sbjct: 376 -----------------------EKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAG 412
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK---NGKMDEASRLLDLMIQIGVRPNAF 251
W +A EM+ +GV+P VVT+N+++D LCK G++ EA L D MI+ G P+
Sbjct: 413 KWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVV 472
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
Y+ L+DG G+++ A+ L +ME+ GC V++Y+ LI+G C +++ AL L+ M
Sbjct: 473 TYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAM 532
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
+ KG PD + Y T+ L + V++A LFD GV + Y + IDGLC + +
Sbjct: 533 VEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARV 592
Query: 372 VEAVELFR 379
EA++L +
Sbjct: 593 DEALKLLQ 600
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/392 (32%), Positives = 207/392 (52%), Gaps = 28/392 (7%)
Query: 10 MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS 69
+R P + IL L K+ + ++L GL D+ T+NI I+ C+ R+
Sbjct: 9 VRIYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIG 67
Query: 70 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
V + + F PN +T+ +L+ GLC R+ +A AL+ ++ G P+V TYNTL+
Sbjct: 68 DAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLL 127
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRG 189
+G + G AL +F+ GFV PDVVTY ++I G
Sbjct: 128 HGFCKVGKLDEALKIFDGAVK-------RGFV----------------PDVVTYNALING 164
Query: 190 FCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
FC A+ +EA+ +L M+ + + P+VVT+N +++ LCKNG++DEA L+ + G PN
Sbjct: 165 FCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLI---VDKGFSPN 221
Query: 250 AFVYNTLMDGFCLT-GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
Y+TL+ G C R+ A++L M GC + SY+ LI+G + + + AL L+
Sbjct: 222 VITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLF 281
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
G +L +G +P+V YN L L + +V AF+LF + + G+ D TY FIDGLCK
Sbjct: 282 GSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKA 341
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +A+ + + + C D+ ++N +I+GL
Sbjct: 342 GRVEDALLMLKDMDEKGCVPDVVSHNAVINGL 373
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 126/389 (32%), Positives = 187/389 (48%), Gaps = 28/389 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L K D L +F G PD+ TYN LIN FCK ++ +
Sbjct: 118 PDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRI 177
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R++ P+ VT+ SL+ GLC R+ EA L G PNV TY+TLI+GL R
Sbjct: 178 LQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCR 234
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ + A++L +M PD+V+Y ++I G
Sbjct: 235 ELRRL----------------------ESARQLLEKMVLNGCKPDIVSYNALIHGLAREQ 272
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+EA L ++ QG +P V T+N+++D L K +++EA L +++ G+ P+A Y
Sbjct: 273 GVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYT 332
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+DG C GRV A + M+ GC V S++ +ING CK K ++ A L M +K
Sbjct: 333 VFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAK 392
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK---NSYI 371
G P+ + +NTL + ++A F EM + GV TY +DGLCK I
Sbjct: 393 GCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRI 452
Query: 372 VEAVELFRTLRILKCELDIRAYNCLIDGL 400
EA+ LF + D+ Y+ LIDGL
Sbjct: 453 KEAITLFDAMIEKGRVPDVVTYSALIDGL 481
>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 456
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 136/407 (33%), Positives = 217/407 (53%), Gaps = 14/407 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML M +PP + F + G LAK KHY T +SL K++ G+ P+L T NILINCFC
Sbjct: 40 FNGMLLMHHTPP-IVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFC 98
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+G++S F VLG+IL+ + PN +T T+L+KGLC + + ++ K+ G + N
Sbjct: 99 HLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQV 158
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
+Y TL+NGL + G T A+ + + V + V++A + + +M
Sbjct: 159 SYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEM 218
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
I P+V+TYT++I GFC A A LL EM+ + + PNV T+ +++D LCK GK+
Sbjct: 219 NARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKV 278
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA LL M G + Y +L+DGFC +++A LF+ M+ G ++Y+ L
Sbjct: 279 KEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTAL 338
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I+G CK ++ A L+ ++L KG DV YN + L + ++ A + +M+ +G
Sbjct: 339 IDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGC 398
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
+ T+ I L K +A +L + I K L R ++ + D
Sbjct: 399 IPNVVTFEIIIRSLFKKDENDKAEKLLHEM-IAKGLLRFRNFHEIED 444
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 118/278 (42%), Gaps = 35/278 (12%)
Query: 157 VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
++ VD A F M + P +V + ++ ++ A L +M +G++PN+V
Sbjct: 29 IDNVVDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLV 88
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
T N++++ C G+M + +L ++++G +PN TLM G CL G V ++ +
Sbjct: 89 TLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKV 148
Query: 277 ESMGCTHTVFSYSILIN-----------------------------------GYCKNKEI 301
+ G SY L+N G CK+K +
Sbjct: 149 VAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLV 208
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A Y EM ++GI P+V+ Y TL Q+ AF L +EM + + +TY
Sbjct: 209 NEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAIL 268
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
ID LCK + EA L + D+ Y L+DG
Sbjct: 269 IDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDG 306
>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 138/420 (32%), Positives = 218/420 (51%), Gaps = 31/420 (7%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ +R P + SFNIL C LS F +L G PD+ T+N L++ C R
Sbjct: 132 MEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDR 191
Query: 68 VSHGFVVLGRILRSCF---------------TPNAVTFTSLIKGLCAESRIMEAAALFTK 112
+S + G ++ + F TP +TF +LI GLC E R++EAAAL K
Sbjct: 192 ISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNK 251
Query: 113 LRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGF 160
+ G +V TY T++NG+ + G T ALNL +M + + V +G
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
A+ LF +M ++ I P+V TY +I GFC W++A+ LL +M+++ + P+V+TFN
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
++ K GK+ EA +L D M+ + P+ YN+++ GFC R + AK +F M S
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-- 429
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
V +++ +I+ YC+ K ++ + L E+ +G+ + YNTL E+ + A
Sbjct: 430 --PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LF EM GV DT T + G C+N + EA+ELF +++ K +LD AYN +I G+
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 547
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 132/409 (32%), Positives = 202/409 (49%), Gaps = 17/409 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+ + +P V +FN L L +L ++ GL D+ TY ++N
Sbjct: 213 LFDQMVEIGLTPV-VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 271
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CKMG +L ++ + P+ V ++++I LC + +A LF+++ G PNV
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
FTYN +I+G G A L +M V EG + +A++L +
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 391
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M I PD VTY S+I GFC N +++AK M D P+VVTFN I+D C+ +
Sbjct: 392 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAK----HMFDLMASPDVVTFNTIIDVYCRAKR 447
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+DE +LL + + G+ N YNTL+ GFC +N A++LF M S G + +I
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L+ G+C+N+++E AL L+ + I D V YN + + + +V+ A+ LF + G
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
V D TY I G C S I +A LF ++ E D YN LI G
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 616
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 184/363 (50%), Gaps = 8/363 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L K+ H+ LF + G+ P+++TYN +I+ FC GR S +
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+ +TF +LI E ++ EA L ++ P+ TYN++I G +
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 135 TGHTIVALNLFEEMASGN--------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
A ++F+ MAS + + VD+ +L ++ + + TY ++
Sbjct: 414 HNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I GFC ++ N A+ L EM+ GV P+ +T N+++ C+N K++EA L +++ +
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+ YN ++ G C +V+ A +LF S+ G V +Y+++I+G+C I A
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 593
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L+ +M G +PD YNTL + +++++ +L EM+ +G + D +T + + +C
Sbjct: 594 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIIC 653
Query: 367 KNS 369
+ S
Sbjct: 654 RVS 656
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 184/395 (46%), Gaps = 48/395 (12%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
FDYM+ RP V N + G + D +SL++++ + ++Y++NILI CFC
Sbjct: 94 FDYMVRSRPFYTAV-DCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFC 152
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
++S + F KL G +P+V
Sbjct: 153 DCHKLSFSL-----------------------------------STFGKLTKLGFQPDVV 177
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
T+NTL++GL AL LF M GF++ A LF QM + + P V+T+
Sbjct: 178 TFNTLLHGLCLEDRISEALALFGYMVE-------TGFLE-AVALFDQMVEIGLTPVVITF 229
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
++I G C EA L+ +M+ +G+ +VVT+ I++ +CK G A LL M +
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
++P+ +Y+ ++D C G + A+ LF M G VF+Y+ +I+G+C
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A L +M+ + I PDV+ +N L + ++ A KL DEM + DT TY + I
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
G CK++ +A +F L D+ +N +ID
Sbjct: 410 GFCKHNRFDDAKHMFD----LMASPDVVTFNTIID 440
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 135/307 (43%), Gaps = 22/307 (7%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR--- 67
R P V +FN L K L + +FPD TYN +I FCK R
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
H F ++ +P+ VTF ++I C R+ E L ++ G N TYNT
Sbjct: 420 AKHMFDLMA-------SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472
Query: 128 LINGLYRTGHTIVALNLFEEMASG-------NGEFGVEGF-----VDKAKELFLQMKDEN 175
LI+G + A +LF+EM S + GF +++A ELF ++
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
I+ D V Y +I G C + +EA L + GV+P+V T+NV++ C + +A+
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
L M G P+ YNTL+ G G ++++ EL M S G + F+ +
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEII 652
Query: 296 CKNKEIE 302
C+ + E
Sbjct: 653 CRVSDEE 659
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 135/438 (30%), Positives = 221/438 (50%), Gaps = 49/438 (11%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP V ++ + L K + +D +F+++ G P+ YTYN LI+ + +G+
Sbjct: 228 RGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKE 287
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+L + P+ T+ SL+ LC R EA F + G +P V TY LI+
Sbjct: 288 VVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIH 347
Query: 131 GLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMK----- 172
G Y T + ++ F ++ NG + G +DKA ++F +M+
Sbjct: 348 G-YATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLS 406
Query: 173 ------------------------------DENINPDVVTYTSVIRGFCYANDWNEAKCL 202
+E + P++V + S++ G C + W A+ L
Sbjct: 407 PNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEEL 466
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
+ EM+DQG+ PN V FN ++ LC G++ E RL+DLM +GVRP+AF Y L+ G+CL
Sbjct: 467 VYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCL 526
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
TGR + A+++F M S+G + T +Y+ L++GYC I+ A L+ EML KG+ P VV
Sbjct: 527 TGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVT 586
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
YNT+ LF+ + A +L+ M G D +TY ++GLCK++ + EA ++F++L
Sbjct: 587 YNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLC 646
Query: 383 ILKCELDIRAYNCLIDGL 400
+L+I + +I L
Sbjct: 647 SKGLQLNIITFTIMIGAL 664
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 208/420 (49%), Gaps = 23/420 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNK---HYDTVLSLFKRLN---STGLFPDLYTYN 56
+FD +L+ P V +FN L +++ + + +S F R+ S + P+L TY+
Sbjct: 36 LFDELLH-HARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPNLCTYS 94
Query: 57 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA-ALFTKLRV 115
ILI FC+MG + HGF G IL++ + + + L+KGLC R+ EA L ++
Sbjct: 95 ILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPE 154
Query: 116 FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE---------------FGVEGF 160
GC P+ +Y L+ GL AL L MA +G F EG
Sbjct: 155 LGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQ 214
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
VDK LFL+M D I PDVVTYT+VI G C A ++ A+ + +M+D G +PN T+N
Sbjct: 215 VDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNC 274
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
++ GK E ++L+ M G++P+ + Y +L++ C GR A+ F SM G
Sbjct: 275 LIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKG 334
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
V +Y ILI+GY + S M+ G+ PD I+N F + +++A
Sbjct: 335 IKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAM 394
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+F++M++ G++ + Y ID LCK + +A F + +I +N L+ GL
Sbjct: 395 DIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGL 454
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 174/362 (48%), Gaps = 23/362 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FNI F AK D + +F ++ GL P++ Y LI+ CK+GRV V +++
Sbjct: 377 FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMI 436
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
TPN V F SL+ GLC + A L ++ G PN +NTLI L G +
Sbjct: 437 NEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVM 496
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
+ + L M+ + PD +YT +I G+C +EA
Sbjct: 497 -----------------------EGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEA 533
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
+ + M+ G+ P VT+N ++ C ++D+A L M++ GV P YNT++ G
Sbjct: 534 EKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHG 593
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
T R + AKEL+++M + G +++Y+I++NG CK+ ++ A ++ + SKG++ +
Sbjct: 594 LFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLN 653
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
++ + + L + + E A LF + +G+ + TYR + L + + E LF
Sbjct: 654 IITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFS 713
Query: 380 TL 381
+
Sbjct: 714 AM 715
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 132/281 (46%), Gaps = 12/281 (4%)
Query: 39 LFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 98
L + G+ PD ++Y LI+ +C GR V ++ +P VT+ +L+ G C
Sbjct: 501 LIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYC 560
Query: 99 AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE 158
+ SRI +A LF ++ G P V TYNT+++GL++T A L+ M + + +
Sbjct: 561 SASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIY 620
Query: 159 GF------------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
+ VD+A ++F + + + +++T+T +I +A L +
Sbjct: 621 TYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAI 680
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
G+ PNVVT+ ++ + L + G ++E L M + G PN+ + N L+ G +
Sbjct: 681 PANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDI 740
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
+RA ++ + + S+L++ + ++ A SL
Sbjct: 741 SRAGAYLSKLDERNFSVEASTTSLLMSIFTSDEYQHHAKSL 781
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ +F I+ G L K + + LF + + GL P++ TY ++ + G + +
Sbjct: 654 IITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFS 713
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGCEPNV 122
+ ++ PN+ +L++ L I A A +KL R F E +
Sbjct: 714 AMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEAST 761
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 141/424 (33%), Positives = 213/424 (50%), Gaps = 27/424 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAK-------NKHYDTVLSLFKRLN---STGLFPDL 52
+FD +L P + +FN L +++ + V+SLF R+ + + PDL
Sbjct: 36 LFDGLLT-HARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVTPDL 94
Query: 53 YTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 112
TY+ILI CFC+MGR+ HGF G IL+S + N + L+KGLC R+ EA + K
Sbjct: 95 CTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDILIK 154
Query: 113 -LRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE---------------FG 156
+ GC P+V +YNTL+ G AL L MA G F
Sbjct: 155 RMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFF 214
Query: 157 VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
EG VDKA LFL+M D I P+VVTYT+VI G C A + A+ + +M+D+GV+P+
Sbjct: 215 TEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDND 274
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
T+N ++ GK E R+L+ M G++P+ + Y +L++ C GR A+ F SM
Sbjct: 275 TYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSM 334
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
G V Y ILI+GY + L M+ G+ PD I+N +F + +
Sbjct: 335 IRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMI 394
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
+ A +F++M++ G++ D + ID LCK + +AV F + +I +N L
Sbjct: 395 DEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSL 454
Query: 397 IDGL 400
+ GL
Sbjct: 455 VYGL 458
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 203/410 (49%), Gaps = 13/410 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M++ P ++ G L+ K + V+ + + +++ GL PD YTY L+N
Sbjct: 260 VFQQMIDKGVKPDNDTYNCLIHGYLSIGK-WKEVVRMLEEMSAHGLKPDCYTYGSLLNYL 318
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C GR ++R PN + LI G + + E L + G P+
Sbjct: 319 CNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDH 378
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQ 170
+N + + A+++F +M V F VD A F Q
Sbjct: 379 HIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQ 438
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M +E + P++ + S++ G C + W +AK EM++QG++P+VV FN I+ LC G+
Sbjct: 439 MMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQ 498
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ +A RL+DLM ++G RP+ Y TL+ G CL GR++ A + M S+G ++Y+
Sbjct: 499 VMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNT 558
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L++GYC+ I+ A ++ EML GI P VV Y+T+ LF + A +L+ M G
Sbjct: 559 LLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSG 618
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ W Y ++GL KN+ + EA +LF++L +L+I +N +I L
Sbjct: 619 KQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGAL 668
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 184/386 (47%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P FNI+F AK D + +F ++ GL PD+ + LI+ CK+GRV +
Sbjct: 376 PDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLK 435
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ PN F SL+ GLC + +A + ++ G P+V +NT++ L
Sbjct: 436 FNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCT 495
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G + KA+ L M+ PDV++YT++I G C
Sbjct: 496 KGQVM-----------------------KAQRLIDLMERVGTRPDVISYTTLIGGHCLVG 532
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+EA L M+ G++P+ T+N ++ C+ G++D+A + M++ G+ P Y+
Sbjct: 533 RIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYS 592
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
T++ G T R + AKEL+++M + G ++ Y+I++NG KN ++ A L+ + SK
Sbjct: 593 TILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSK 652
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
+ ++ +N + LF+ + E A LF + G+ D +TY + L + Y+ E
Sbjct: 653 DFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEF 712
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+LF + + R N L+ L
Sbjct: 713 DDLFSAMEKSGTTPNSRMLNALVRRL 738
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 191/394 (48%), Gaps = 25/394 (6%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
FD M+ + P V + IL A + L + GL PD + +NI+ +
Sbjct: 331 FDSMIR-KGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYA 389
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K + + ++ + +P+ V F +LI LC R+ +A F ++ G PN+F
Sbjct: 390 KKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIF 449
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
+N+L+ GL ++ +E KAKE + +M ++ I PDVV +
Sbjct: 450 VFNSLVYGL-------CTVDKWE----------------KAKEFYFEMLNQGIRPDVVFF 486
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
+++ C +A+ L+ M G +P+V+++ ++ C G++DEA++ LD+M+
Sbjct: 487 NTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLS 546
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
+G++P+ + YNTL+ G+C GR++ A +F M G T V +YS +++G +
Sbjct: 547 VGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSE 606
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A LY M++ G + ++ IYN + L + + V+ AFKLF + + T+ I
Sbjct: 607 AKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIG 666
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
L K+ +A+ LF T+ D+ Y CLI
Sbjct: 667 ALFKSGRNEDAMHLFATISSYGLVPDVFTY-CLI 699
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 139/400 (34%), Positives = 214/400 (53%), Gaps = 24/400 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F ML RP P V F + +AK +D V+ L+ ++ + G+ DLY++ ILI+
Sbjct: 64 FSLFCEMLQSRPIPSIV-DFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CFC+ R+S +LG++++ F P+ VT SL+ G C +R EA +L + FG P
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 182
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
NV YNT+INGL + ++ A E+F M+ + I D
Sbjct: 183 NVVIYNTVINGLCKNRD-----------------------LNNALEVFYCMEKKGIRADA 219
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY ++I G + W +A LL +M+ + + PNV+ F ++D K G + EA L
Sbjct: 220 VTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKE 279
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
MI+ V PN F YN+L++GFC+ G + AK +F M S GC V +Y+ LI G+CK+K
Sbjct: 280 MIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKR 339
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+E + L+ EM +G+ D YNTL + ++ A K+F+ M GV+ D TY
Sbjct: 340 VEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNI 399
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+D LC N I +A+ + L+ + ++DI YN +I GL
Sbjct: 400 LLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 439
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 170/366 (46%), Gaps = 27/366 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N + L KN+ + L +F + G+ D TYN LI+ GR + +
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ PN + FT+LI E ++EA L+ ++ PNVFTYN+LING
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING--- 298
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
F + G + AK +F M + PDVVTY ++I GFC +
Sbjct: 299 --------------------FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSK 338
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ L EM QG+ + T+N ++ C+ GK++ A ++ + M+ GV P+ YN
Sbjct: 339 RVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYN 398
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+D C G++ +A + ++ + +Y+I+I G C+ +++ A L+ + K
Sbjct: 399 ILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRK 458
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+KPD + Y T+ L A KL M+ DG Y D ++ Y +
Sbjct: 459 GVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY----DETLRDHYTSLS 514
Query: 375 VELFRT 380
EL +
Sbjct: 515 AELIKA 520
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 116/238 (48%)
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
D A LF +M P +V +T V+ N ++ L +M + G+ ++ +F ++
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
+ C+ ++ A LL M+++G RP+ +L++GFC R A L SM+ G
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
V Y+ +ING CKN+++ AL ++ M KGI+ D V YNTL L + A +
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
L +M + + + + ID K ++EA L++ + ++ YN LI+G
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%)
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +R + +++A L EM+ P++V F ++ + K K D L M
Sbjct: 47 YRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKME 106
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+G+ + + + L+ FC R++ A L M +G ++ + L+NG+C+ +
Sbjct: 107 NLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQ 166
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+SL M G P+VVIYNT+ L + + A ++F M++ G+ AD TY T I
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 226
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
GL + +A L R + K + ++ + LID
Sbjct: 227 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALID 262
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 85/171 (49%)
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K D+A L M+Q P+ + ++ + + L+ ME++G +H ++S++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
ILI+ +C+ + AL+L G+M+ G +P +V +L + ++ + A L D M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G + Y T I+GLCKN + A+E+F + D YN LI GL
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGL 229
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 138/438 (31%), Positives = 218/438 (49%), Gaps = 49/438 (11%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP + +++ + L K + D + +++ + G+ PD +TYN LI + G+
Sbjct: 250 RGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKE 309
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
V + R P+ V +L+ LC +I EA +F + + G P+VF+Y ++N
Sbjct: 310 AVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLN 369
Query: 131 GLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENIN 177
G G + +LF+ M G+G + G +DKA +F +M+D +
Sbjct: 370 GYATKGCLVDMTDLFDLML-GDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 428
Query: 178 PDVVTYTSVI-----------------------------------RGFCYANDWNEAKCL 202
P VVTY +VI +GFC +AK L
Sbjct: 429 PHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKEL 488
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
+ E+M+ G++ ++V F I++ LCK G++ +A + DL + +G+ P+A VYN LMDG+CL
Sbjct: 489 ISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCL 548
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G++ +A +F +M S G V Y L+NGYCK I+ LSL+ EML KGIKP ++
Sbjct: 549 VGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 608
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
YN + LFE + A F EM G+A + TY + GL KN EA+ LF+ LR
Sbjct: 609 YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELR 668
Query: 383 ILKCELDIRAYNCLIDGL 400
+ ++DI N +I G+
Sbjct: 669 AMNVKIDIITLNTMIAGM 686
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 187/384 (48%), Gaps = 20/384 (5%)
Query: 36 VLSLFKRLNSTG-----LFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTF 90
++LF R S L P YTY IL++C + R G++LR+ +A+
Sbjct: 92 AVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIA 151
Query: 91 TSLIKGLCAESRIMEA-AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
+ L+KG C R EA L + GC P+VF+YN L+ L G + A +L MA
Sbjct: 152 SHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMA 211
Query: 150 SGN--------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
G F EG V+KA +LF +M I PD+VTY+SV+ C A
Sbjct: 212 EGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARA 271
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
++A+ L +M+++GV P+ T+N ++ G+ EA R+ M + + P+ NT
Sbjct: 272 MDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNT 331
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
LM C G++ A+++F +M G VFSY+I++NGY + L+ ML G
Sbjct: 332 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDG 391
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
I PD+ +N L +++A +F+EM+ GV TY T I LC+ + +A+
Sbjct: 392 IAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAM 451
Query: 376 ELFRTLRILKCELDIRAYNCLIDG 399
E F + D AY+CLI G
Sbjct: 452 EKFNQMIDQGVVPDKYAYHCLIQG 475
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 194/410 (47%), Gaps = 13/410 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M M+ P V S+ I+ A + LF + G+ PD+YT+N+LI +
Sbjct: 348 VFDTMA-MKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAY 406
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
G + ++ + P+ VT+ ++I LC ++ +A F ++ G P+
Sbjct: 407 ANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDK 466
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQ 170
+ Y+ LI G G + A L E+ + + G V A+ +F
Sbjct: 467 YAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDL 526
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ ++PD V Y ++ G+C +A + M+ G++PNVV + +++ CK G+
Sbjct: 527 TVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGR 586
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+DE L M+Q G++P+ +YN ++DG GR AK F M G +YSI
Sbjct: 587 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSI 646
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
++ G KN+ + A+ L+ E+ + +K D++ NT+ +F+ +VE A LF + R G
Sbjct: 647 VLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSG 706
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ TY I L K + EA ++F +++ CE D R N ++ L
Sbjct: 707 LVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVREL 756
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 159/361 (44%), Gaps = 12/361 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L + D + F ++ G+ PD Y Y+ LI FC G + +
Sbjct: 429 PHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKEL 488
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ I+ + + V F S+I LC R+M+A +F G P+ YN L++G
Sbjct: 489 ISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCL 548
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
G AL +F+ M S E V G+ +D+ LF +M + I P +
Sbjct: 549 VGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 608
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I G A AK EM + G+ N T+++++ L KN DEA L +
Sbjct: 609 YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELR 668
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ V+ + NT++ G T RV AK+LF S+ G +YSI+I K +E
Sbjct: 669 AMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVE 728
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A ++ M + G +PD + N + L + +++ RA ++ + + T +
Sbjct: 729 EAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLV 788
Query: 363 D 363
D
Sbjct: 789 D 789
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 13/248 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M++ P V + L K D LSLF+ + G+ P YNI+I+
Sbjct: 558 VFDAMVSAGIEPN-VVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 616
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
+ GR V + S N T++ +++GL EA LF +LR + ++
Sbjct: 617 FEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDI 676
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMA-SGNGEFGV-----------EGFVDKAKELFLQ 170
T NT+I G+++T A +LF ++ SG V EG V++A+++F
Sbjct: 677 ITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSS 736
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M++ PD V+R N+ A L ++ ++ +T +++D G
Sbjct: 737 MQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGT 796
Query: 231 MDEASRLL 238
E R L
Sbjct: 797 CREQIRFL 804
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 138/438 (31%), Positives = 218/438 (49%), Gaps = 49/438 (11%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP + +++ + L K + D + +++ + G+ PD +TYN LI + G+
Sbjct: 250 RGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKE 309
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
V + R P+ V +L+ LC +I EA +F + + G P+VF+Y ++N
Sbjct: 310 AVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLN 369
Query: 131 GLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENIN 177
G G + +LF+ M G+G + G +DKA +F +M+D +
Sbjct: 370 GYATKGCLVDMTDLFDLML-GDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 428
Query: 178 PDVVTYTSVI-----------------------------------RGFCYANDWNEAKCL 202
P VVTY +VI +GFC +AK L
Sbjct: 429 PHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKEL 488
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
+ E+M+ G++ ++V F I++ LCK G++ +A + DL + +G+ P+A VYN LMDG+CL
Sbjct: 489 ISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCL 548
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G++ +A +F +M S G V Y L+NGYCK I+ LSL+ EML KGIKP ++
Sbjct: 549 VGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 608
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
YN + LFE + A F EM G+A + TY + GL KN EA+ LF+ LR
Sbjct: 609 YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELR 668
Query: 383 ILKCELDIRAYNCLIDGL 400
+ ++DI N +I G+
Sbjct: 669 AMNVKIDIITLNTMIAGM 686
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 186/384 (48%), Gaps = 20/384 (5%)
Query: 36 VLSLFKRLNSTG-----LFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTF 90
++LF R S L P YTY IL++C + R G++LR+ +A+
Sbjct: 92 AVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIA 151
Query: 91 TSLIKGLCAESRIMEA-AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
+ L+KG C R EA L + GC P+VF+YN L+ L G + A +L MA
Sbjct: 152 SHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMA 211
Query: 150 SGN--------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
G F EG V+KA +LF +M I PD+VTY+SV+ C A
Sbjct: 212 EGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARA 271
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
++A+ L +M+++GV P+ T+N ++ G+ EA R+ M + + P+ NT
Sbjct: 272 MDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNT 331
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
LM C G++ A+++F +M G VFSY+I++NGY + L+ ML G
Sbjct: 332 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDG 391
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
I P + +N L +++A +F+EM+ GV TY T I LC+ + +A+
Sbjct: 392 IAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAM 451
Query: 376 ELFRTLRILKCELDIRAYNCLIDG 399
E F + D AY+CLI G
Sbjct: 452 EKFNQMIDQGVVPDKYAYHCLIQG 475
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 188/398 (47%), Gaps = 24/398 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD ML P +C+FN+L A D + +F + G+ P + TY +I
Sbjct: 383 LFDLMLG-DGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAAL 441
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C++G++ +++ P+ + LI+G C +++A L +++ G ++
Sbjct: 442 CRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDI 501
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+ ++IN L + G + A N+F+ + ++PD V
Sbjct: 502 VFFGSIINNLCKLGRVMDAQNIFDLTV-----------------------NVGLHPDAVV 538
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++ G+C +A + M+ G++PNVV + +++ CK G++DE L M+
Sbjct: 539 YNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREML 598
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q G++P+ +YN ++DG GR AK F M G +YSI++ G KN+ +
Sbjct: 599 QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFD 658
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ L+ E+ + +K D++ NT+ +F+ +VE A LF + R G+ TY I
Sbjct: 659 EAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMI 718
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
L K + EA ++F +++ CE D R N ++ L
Sbjct: 719 TNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVREL 756
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 159/361 (44%), Gaps = 12/361 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L + D + F ++ G+ PD Y Y+ LI FC G + +
Sbjct: 429 PHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKEL 488
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ I+ + + V F S+I LC R+M+A +F G P+ YN L++G
Sbjct: 489 ISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCL 548
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
G AL +F+ M S E V G+ +D+ LF +M + I P +
Sbjct: 549 VGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 608
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I G A AK EM + G+ N T+++++ L KN DEA L +
Sbjct: 609 YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELR 668
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ V+ + NT++ G T RV AK+LF S+ G +YSI+I K +E
Sbjct: 669 AMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVE 728
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A ++ M + G +PD + N + L + +++ RA ++ + + T +
Sbjct: 729 EAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLV 788
Query: 363 D 363
D
Sbjct: 789 D 789
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 13/248 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M++ P V + L K D LSLF+ + G+ P YNI+I+
Sbjct: 558 VFDAMVSAGIEPN-VVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 616
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
+ GR V + S N T++ +++GL EA LF +LR + ++
Sbjct: 617 FEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDI 676
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMA-SGNGEFGV-----------EGFVDKAKELFLQ 170
T NT+I G+++T A +LF ++ SG V EG V++A+++F
Sbjct: 677 ITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSS 736
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M++ PD V+R N+ A L ++ ++ +T +++D G
Sbjct: 737 MQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGT 796
Query: 231 MDEASRLL 238
E R L
Sbjct: 797 CREQIRFL 804
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 139/445 (31%), Positives = 229/445 (51%), Gaps = 49/445 (11%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P + F+ L +AK +D V+SL +++ + G+ +LYTY+I IN F
Sbjct: 62 LFGDMVKSRPFPS-IVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYF 120
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL------------- 109
C+ ++S +LG++++ + P+ VT SL+ G C +RI EA AL
Sbjct: 121 CRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 180
Query: 110 --FT--------------------KLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
FT ++ V GC+P++ TY +INGL + G +ALNL +
Sbjct: 181 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK 240
Query: 148 MASGNGEFGV-------EGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M G E V +G +D A +LF +M+ + I PDV TY +I C
Sbjct: 241 MEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGR 300
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG-VRPNAFVYN 254
W++A LL +M+++ + P++V FN ++D K GK+ EA +L D M++ P+ YN
Sbjct: 301 WSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYN 360
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+ GFC RV E+F M G +Y+ LI+G+ + ++ + A ++ +M+S
Sbjct: 361 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 420
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+ PD++ YN L L VE A +F+ MQ+ + D TY T I+ LCK + +
Sbjct: 421 GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+LF +L + + ++ Y ++ G
Sbjct: 481 WDLFCSLSLKGVKPNVVTYTTMMSG 505
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 183/394 (46%), Gaps = 14/394 (3%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
+ D M+ M P V ++ G NK + V +L +R+ G PDL TY +IN
Sbjct: 166 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV-ALVERMVVKGCQPDLVTYGAVING 224
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK G +L ++ + + V + ++I GLC + +A LF K+ G +P+
Sbjct: 225 LCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 284
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFL 169
VFTYN LI+ L G A L +M N F EG + +A++L+
Sbjct: 285 VFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD 344
Query: 170 QM-KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+M K ++ PDVV Y ++I+GFC E + EM +G+ N VT+ ++ +
Sbjct: 345 EMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQA 404
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
D A + M+ GV P+ YN L+DG C G V A +F M+ + +Y
Sbjct: 405 RDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTY 464
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ +I CK ++E L+ + KG+KP+VV Y T+ E A LF EM+
Sbjct: 465 TTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE 524
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
DG ++ TY T I ++ + EL + +R
Sbjct: 525 DGPLPNSGTYNTLIRARLRDGDEAASAELIKEMR 558
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 170/343 (49%), Gaps = 24/343 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +N + L K KH D LF ++ + G+ PD++TYN LI+C C GR S +L
Sbjct: 250 VVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLS 309
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPNVFTYNTLINGLYRT 135
+L P+ V F +LI E +++EA L+ ++ + C P+V YNTLI G +
Sbjct: 310 DMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKY 369
Query: 136 GHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
V++ E+F +M + + VTYT++I GF A D
Sbjct: 370 KR-----------------------VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
+ A+ + +M+ GV P+++T+N+++D LC NG ++ A + + M + ++ + Y T
Sbjct: 407 CDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTT 466
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
+++ C G+V +LF S+ G V +Y+ +++G+C+ E A +L+ EM G
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
P+ YNTL + +L EM+ G A D T+
Sbjct: 527 PLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF 569
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 122/237 (51%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A LF M P +V ++ ++ N ++ L +M + G+ N+ T+++
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
++ C+ ++ A +L M+++G P+ N+L++GFC R++ A L M MG
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
+++ L++G ++ + A++L M+ KG +PD+V Y + L + + + A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
L ++M++ + AD Y T IDGLCK ++ +A +LF + + D+ YN LI
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 89/171 (52%)
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+D+A L M++ P+ ++ L+ + + L M+++G +H +++YS
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
I IN +C+ ++ AL++ G+M+ G P +V N+L +++ A L D+M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G DT T+ T + GL +++ EAV L + + C+ D+ Y +I+GL
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 225
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 135/447 (30%), Positives = 222/447 (49%), Gaps = 48/447 (10%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ +FD M+ + PP V +++ L L K + + ++ + + G+ P+ TYNI+I
Sbjct: 223 YFLFDEMIG-QGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIR 281
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+C +G++ +L ++ S P+ VT+ LI+ C R EA ++F + G +P
Sbjct: 282 GYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKP 341
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEF------------GVEGFVDKAKELF 168
N Y+ L++G G I +L + M F G VDKA F
Sbjct: 342 NSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAF 401
Query: 169 LQMKDENINPDVVTY-----------------------------------TSVIRGFCYA 193
+M+ + PDVV+Y TS+I G C
Sbjct: 402 TEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSI 461
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+W + + L EM+++G+ P+ + N IMD LCK G++ EA D++I IGV+PN Y
Sbjct: 462 GEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSY 521
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
NTL+DG+C G+++ + + F M S+G ++Y+ L+NGY KN +E AL+LY EM
Sbjct: 522 NTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFR 581
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
K +K + N + LF+ ++ A +L+ +M G TY T + GLC+NS + E
Sbjct: 582 KDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDE 641
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A+ +F LR + ELD+ +N +I+ L
Sbjct: 642 ALRMFEDLRSKEFELDVWTFNIVINAL 668
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 140/493 (28%), Positives = 219/493 (44%), Gaps = 97/493 (19%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDT-------VLSLFKRLNSTG---LFPDL 52
+FD +L + P V +FN + +A+ + +SLF + +G + +
Sbjct: 36 LFDELLP-QARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMARSGVNMMAANR 94
Query: 53 YTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FT 111
Y ILI CFC +GR+ F L+ + VT LIKGLC R +A + F
Sbjct: 95 YIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFR 154
Query: 112 KLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG---------------EFG 156
++ G P+VF+YN LI GL + AL L M + G F
Sbjct: 155 RMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFF 214
Query: 157 VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
EG VDKA LF +M + PDVVTY+S+I G C A N+A+ +L M D+GV PN
Sbjct: 215 KEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTR 274
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
T+N+++ C G+++EA RLL M G++P+ Y L+ +C GR A+ +F SM
Sbjct: 275 TYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSM 334
Query: 277 ESMGCTHTVFSYSILING-----------------------------------YCKNKEI 301
G Y IL++G Y K+ +
Sbjct: 335 VRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAV 394
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY--- 358
+ A++ + EM G++PDVV Y+T+ +L +I +VE A F++M +G++ + ++
Sbjct: 395 DKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSL 454
Query: 359 --------------------------------RTFIDGLCKNSYIVEAVELFRTLRILKC 386
T +D LCK +VEA + F + +
Sbjct: 455 IHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGV 514
Query: 387 ELDIRAYNCLIDG 399
+ ++ +YN LIDG
Sbjct: 515 KPNVVSYNTLIDG 527
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 175/372 (47%), Gaps = 20/372 (5%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+FNIL AK+ D ++ F + GL PD+ +Y+ +I+ CK+GRV ++
Sbjct: 380 AFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQM 439
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ +PN ++FTSLI GLC+ + L ++ G P+ NT+++ L + G
Sbjct: 440 VSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRV 499
Query: 139 IVALNLFEEMASGNGEFGVE----------------GFVDKAKELFLQMKDENINPDVVT 182
+ A + F+ + GV+ G +D++ + F +M + PD T
Sbjct: 500 VEAQDFFDMVI----HIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWT 555
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++ G+ +A L EM + V+ +T N+I+ L + G++ A L M+
Sbjct: 556 YNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMV 615
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G + YNT++ G C V+ A +F + S V++++I+IN K I+
Sbjct: 616 DRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRID 675
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A SL+ M+ +G P V+ Y+ + E +E + LF M+++G AAD+ I
Sbjct: 676 EAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVII 735
Query: 363 DGLCKNSYIVEA 374
L + + A
Sbjct: 736 RRLLEKGDVRRA 747
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 129/378 (34%), Positives = 206/378 (54%), Gaps = 13/378 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
++N L K + L++++ + +GL PD YT+N+L+N F K RV + +
Sbjct: 89 ASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFE 148
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ +PN +T++ LI +C + +A +F ++ GC PN+FTY ++I+GL ++G
Sbjct: 149 EMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSG 208
Query: 137 HTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
H A LFEEM S G G D A +LF +M + + PD VT+T
Sbjct: 209 HVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFT 268
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
S++ G A +EA+ + E D G +V +NV++D LCK+ ++DEA + + +
Sbjct: 269 SLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEED 328
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G+ P+ + +N LMDG C +GR++ A L M+ GCT V Y+ LI+G K+ +E A
Sbjct: 329 GLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEA 388
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L EM S G +PDVV YNTL + ++E A +LF+E+ G A +T TY T ++G
Sbjct: 389 GQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFA-NTVTYNTILNG 447
Query: 365 LCKNSYIVEAVELFRTLR 382
LC + EA +LF ++
Sbjct: 448 LCMAGRVDEAYKLFNGMK 465
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 118/366 (32%), Positives = 184/366 (50%), Gaps = 29/366 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ M N SP V +++IL + K + L +F + S G P+++TY +I+
Sbjct: 146 LFEEMQNQNCSPN-VITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGL 204
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K G V F + + V + SLI GL R AA LF ++ G +P+
Sbjct: 205 GKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDH 264
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
T+ +L+ GL GV G +A+ +F + +D DV
Sbjct: 265 VTFTSLVYGL-----------------------GVAGRASEARRIFQEARDVGCALDVNL 301
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I C + +EA + E+ + G+ P+V TFN +MD LCK+G++ +A LL M
Sbjct: 302 YNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMK 361
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G P+ VYNTL+DG +GRV A +L + M+S+G V +Y+ LI+ CK IE
Sbjct: 362 RAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIE 421
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR---DGV-AADTWTY 358
AL L+ E+ +KG + V YNT+ L +V+ A+KLF+ M++ DGV D TY
Sbjct: 422 DALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTY 480
Query: 359 RTFIDG 364
T ++G
Sbjct: 481 TTLLNG 486
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 170/345 (49%), Gaps = 23/345 (6%)
Query: 54 TYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL 113
YN LI+ F K G V + +S P+ TF L+ R+ LF ++
Sbjct: 91 AYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEM 150
Query: 114 RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKD 173
+ C PNV TY+ LI+ + + G V+KA ++FL MK
Sbjct: 151 QNQNCSPNVITYSILIDAVCKCGG-----------------------VEKALKVFLDMKS 187
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
P++ TYTS+I G + ++A L EM +G+ V +N ++ L ++G+ D
Sbjct: 188 RGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADA 247
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A++L M+ G++P+ + +L+ G + GR + A+ +F +GC V Y++LI+
Sbjct: 248 AAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLID 307
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
CK+K ++ A ++GE+ G+ PDV +N L L + ++ AF L +M+R G
Sbjct: 308 TLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTP 367
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
D Y T IDGL K+ + EA +L ++ L E D+ YN LID
Sbjct: 368 DVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLID 412
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 157/323 (48%), Gaps = 12/323 (3%)
Query: 90 FTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
F L +G + + ++ ++ C YN+LI+ + G+T AL ++ M
Sbjct: 57 FIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMG 116
Query: 150 SGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
F VD +LF +M+++N +P+V+TY+ +I C
Sbjct: 117 QSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVE 176
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
+A + ++M +G +PN+ T+ ++D L K+G +D+A L + M G+ VYN+L+
Sbjct: 177 KALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLI 236
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
G +GR + A +LF M S G +++ L+ G A ++ E G
Sbjct: 237 HGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCA 296
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
DV +YN L L + +++ A+++F E++ DG+ D +T+ +DGLCK+ I +A L
Sbjct: 297 LDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFIL 356
Query: 378 FRTLRILKCELDIRAYNCLIDGL 400
++ C D+ YN LIDGL
Sbjct: 357 LGDMKRAGCTPDVTVYNTLIDGL 379
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N L L K+ + L + S G PD+ TYN LI+ CK GR+ +
Sbjct: 367 PDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRL 426
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLR---VFGC-EPNVFTYNTLIN 130
I F N VT+ +++ GLC R+ EA LF ++ V G +P+ TY TL+N
Sbjct: 427 FEEISAKGFA-NTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLN 485
Query: 131 GLYRTGHTIVALNL 144
G + G + +A +L
Sbjct: 486 GARQAGLSELANSL 499
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 128/398 (32%), Positives = 198/398 (49%), Gaps = 18/398 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
PPV NIL L + +F L + + TYN ++N +C+ GR+ +
Sbjct: 185 PPVVPCNILIKRLCSDGRVSDAERVFAALGPSAT---VVTYNTMVNGYCRAGRIEDARRL 241
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + F P+ TF LI+ LC RI +A A+F + GC P+V TY+ L++ +
Sbjct: 242 INGMP---FPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCK 298
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
A+ L +EM + E + EG VD+A + + PD VT
Sbjct: 299 ESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVT 358
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT V++ C + W E + LL EM P+ VTFN I+ LC+ G +D A ++D M
Sbjct: 359 YTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMS 418
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G + Y++++DG C GRV+ A EL ++S GC +Y+ ++ G C ++ E
Sbjct: 419 EHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWE 478
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L EML PD V +NT+ L + V+RA ++ ++M +G + D TY I
Sbjct: 479 RAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCII 538
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
DGLC S I +A+EL L+ C+ DI +N L+ GL
Sbjct: 539 DGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGL 576
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 194/413 (46%), Gaps = 17/413 (4%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+FD ML+ R P V +++IL K Y ++L + + G PD+ TYN+LIN
Sbjct: 271 LAVFDDMLH-RGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLIN 329
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C G V +L + P+AVT+T ++K LC R E L ++ C P
Sbjct: 330 AMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAP 389
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKEL 167
+ T+NT++ L + G A+ + + M+ +G V G VD A EL
Sbjct: 390 DEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDV-GRVDDAVEL 448
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
++K PD + YT+V++G C W A+ L+ EM+ P+ VTFN ++ LC+
Sbjct: 449 LSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQ 508
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
G +D A R+++ M + G P+ YN ++DG C ++ A EL ++S GC + +
Sbjct: 509 KGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVT 568
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
++ L+ G C E A L M+ PD + +NT+ L + + +A + M
Sbjct: 569 FNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMA 628
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+G ++ TY +D L K A+EL + D+ YN +I L
Sbjct: 629 ENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM--TNGTPDLITYNTVISNL 679
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 184/406 (45%), Gaps = 12/406 (2%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++N P PP +FN L L L++F + G P + TY+IL++ CK
Sbjct: 241 LINGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKES 300
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+L + P+ VT+ LI +C E + EA + + L GC+P+ TY
Sbjct: 301 GYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYT 360
Query: 127 TLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDE 174
++ L + L EM S N +G VD+A E+ M +
Sbjct: 361 PVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEH 420
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
D+VTY+S++ G C ++A LL + G +P+ + + ++ LC + + A
Sbjct: 421 GCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERA 480
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
L+ M+ P+ +NT++ C G V+RA + M GC+ + +Y+ +I+G
Sbjct: 481 EELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDG 540
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
C I+ A+ L ++ S G KPD+V +NTL L + + E A +L M R D
Sbjct: 541 LCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPD 600
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
T+ T I LC+ + +A+E + + C + Y+ ++D L
Sbjct: 601 ELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDAL 646
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 188/398 (47%), Gaps = 14/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FN + L + D + + ++ G D+ TY+ +++ C +GRV +
Sbjct: 389 PDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVEL 448
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R+ P+ + +T+++KGLC+ + A L ++ C P+ T+NT++ L +
Sbjct: 449 LSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQ 508
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G A+ + E+M+ + E +D A EL ++ PD+VT
Sbjct: 509 KGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVT 568
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ ++++G C + W +A+ L+ MM P+ +TFN ++ LC+ G + +A L +M
Sbjct: 569 FNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMA 628
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G PN+ Y+ ++D G+ A EL M + T + +Y+ +I+ K ++E
Sbjct: 629 ENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTKAGKME 686
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL L M+S G+ PD Y +L + +RA ++ +Q G++ DT Y +
Sbjct: 687 EALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVL 746
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G C++ A++ F + C D Y L++ L
Sbjct: 747 LGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEAL 784
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 162/365 (44%), Gaps = 49/365 (13%)
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
R+C P V LIK LC++ R+ +A +F L G V TYNT++NG R G
Sbjct: 182 RNC--PPVVPCNILIKRLCSDGRVSDAERVFAAL---GPSATVVTYNTMVNGYCRAGRIE 236
Query: 140 VALNLFEEMASGNGEFG---------VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
A L M F V G + A +F M +P VVTY+ ++
Sbjct: 237 DARRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDAT 296
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C + + +A LL EM +G +P++VT+NV+++ +C G +DEA +L + G +P+A
Sbjct: 297 CKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDA 356
Query: 251 FVY-----------------------------------NTLMDGFCLTGRVNRAKELFVS 275
Y NT++ C G V+RA E+
Sbjct: 357 VTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDH 416
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
M GC + +YS +++G C ++ A+ L + S G KPD + Y T+ L Q
Sbjct: 417 MSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQ 476
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
ERA +L EM D T+ T + LC+ + A+ + + C DI YNC
Sbjct: 477 WERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNC 536
Query: 396 LIDGL 400
+IDGL
Sbjct: 537 IIDGL 541
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 136/315 (43%), Gaps = 43/315 (13%)
Query: 129 INGLYRTGHTIVALNLFEEMASGNG--------------EFGVEGFVDKAKELFLQMKDE 174
+ L + G AL LF+ MASG G +G V A+ +F +
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGPS 216
Query: 175 N------------------------IN-----PDVVTYTSVIRGFCYANDWNEAKCLLIE 205
IN PD T+ +IR C +A + +
Sbjct: 217 ATVVTYNTMVNGYCRAGRIEDARRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDD 276
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M+ +G P+VVT+++++D CK +A LLD M G P+ YN L++ C G
Sbjct: 277 MLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGD 336
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
V+ A + ++ S GC +Y+ ++ C ++ + L EM S PD V +NT
Sbjct: 337 VDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNT 396
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
+ L + V+RA ++ D M G AD TY + +DGLC + +AVEL L+
Sbjct: 397 IVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYG 456
Query: 386 CELDIRAYNCLIDGL 400
C+ D AY ++ GL
Sbjct: 457 CKPDTIAYTTVLKGL 471
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 138/315 (43%), Gaps = 14/315 (4%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP +FN + L + D + + ++++ G PD+ TYN +I+ C +
Sbjct: 493 PPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAME 552
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L + P+ VTF +L+KGLC R +A L + C P+ T+NT+I L
Sbjct: 553 LLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLC 612
Query: 134 RTGHTIVALNLFEEMA-----SGNGEFGV-------EGFVDKAKELFLQMKDENINPDVV 181
+ G A+ + MA + + + G A EL M N PD++
Sbjct: 613 QKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMT--NGTPDLI 670
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY +VI A EA LL M+ G+ P+ T+ + +C+ D A R+L +
Sbjct: 671 TYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRV 730
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
G+ P+ YN ++ GFC R + A + F M S GC +Y IL+ +
Sbjct: 731 QDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLL 790
Query: 302 EGALSLYGEMLSKGI 316
+ A L + S G+
Sbjct: 791 DEAKRLLASLCSLGV 805
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 137/438 (31%), Positives = 221/438 (50%), Gaps = 49/438 (11%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP + ++N + L K + D + +++ + + P+ +TYN LI + G+
Sbjct: 261 RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKE 320
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
V + R P+ VT + L+ LC +I EA +F + + G P+VF+YN ++N
Sbjct: 321 AVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLN 380
Query: 131 GLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENIN 177
G G + +LF+ M G+G + G +DKA +F +M+D +
Sbjct: 381 GYATKGCLVDMTDLFDLML-GDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 439
Query: 178 PDVVTYTSVI-----------------------------------RGFCYANDWNEAKCL 202
PDVVTY +VI +GFC +AK L
Sbjct: 440 PDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKEL 499
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
+ E+M+ G+ ++V F+ I++ LCK G++ +A + DL + +G+ P+A VY+ LMDG+CL
Sbjct: 500 ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCL 559
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G++ +A +F +M S G V Y L+NGYCK I+ LSL+ EML +GIKP ++
Sbjct: 560 VGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTIL 619
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
Y+ + LF+ + A F EM G+A D TY + GL KN EA+ LF+ LR
Sbjct: 620 YSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELR 679
Query: 383 ILKCELDIRAYNCLIDGL 400
+ +++I N +IDG+
Sbjct: 680 AMNVKINIITLNTMIDGM 697
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 196/401 (48%), Gaps = 15/401 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF-V 73
P ++ IL C + + L+ F +L TGL ++ N L+ FC+ R +
Sbjct: 122 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 181
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG--CEPNVFTYNTLING 131
+L R P+ +++ L+K LC + + +A L + G C PNV YNT+I+G
Sbjct: 182 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 241
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPD 179
++ G A +LF+EM + + +DKA+ QM ++ + P+
Sbjct: 242 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 301
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
TY ++I G+ W EA + EM + P+VVT +++M LCK GK+ EA + D
Sbjct: 302 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 361
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M G P+ F YN +++G+ G + +LF M G +++++LI Y
Sbjct: 362 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 421
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++ A+ ++ EM G+KPDVV Y T+ L I +++ A + F++M GVA D + Y
Sbjct: 422 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 481
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I G C + +++A EL + LDI ++ +I+ L
Sbjct: 482 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 522
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 183/384 (47%), Gaps = 20/384 (5%)
Query: 36 VLSLFKRLNSTG-----LFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTF 90
++LF R S L P +TY IL++C + R G++LR+ N +
Sbjct: 103 AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIA 162
Query: 91 TSLIKGLCAESRIMEA-AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
L++G C R EA L + GC P+VF+Y+ L+ L G + A +L MA
Sbjct: 163 NHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA 222
Query: 150 SGNG--------------EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
G F EG V+KA +LF +M I PD+VTY SV+ C A
Sbjct: 223 EGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARA 282
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
++A+ L +M+++ V PN T+N ++ G+ EA R+ M + + P+ +
Sbjct: 283 MDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSM 342
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
LM C G++ A+++F +M G VFSY+I++NGY + L+ ML G
Sbjct: 343 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDG 402
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
I PD +N L +++A +F+EM+ GV D TYRT I LC+ + +A+
Sbjct: 403 IAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM 462
Query: 376 ELFRTLRILKCELDIRAYNCLIDG 399
E F + D AYNCLI G
Sbjct: 463 EKFNQMIDQGVAPDKYAYNCLIQG 486
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 196/410 (47%), Gaps = 13/410 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M M+ P V S+NI+ A + LF + G+ PD YT+N+LI +
Sbjct: 359 VFDTMA-MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAY 417
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
G + ++ + P+ VT+ ++I LC ++ +A F ++ G P+
Sbjct: 418 ANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 477
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQ 170
+ YN LI G G + A L E+ + + G V A+ +F
Sbjct: 478 YAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDL 537
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ ++PD V Y+ ++ G+C +A + M+ G++PNVV + +++ CK G+
Sbjct: 538 TVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGR 597
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+DE L M+Q G++P+ +Y+ ++DG GR AK F M G + +Y+I
Sbjct: 598 IDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNI 657
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
++ G KN+ + A+ L+ E+ + +K +++ NT+ +F+ +VE A LF + R
Sbjct: 658 VLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSR 717
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + TY I L K + EA ++F +++ CE + R N ++ L
Sbjct: 718 LVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVREL 767
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 161/361 (44%), Gaps = 12/361 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L + D + F ++ G+ PD Y YN LI FC G + +
Sbjct: 440 PDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKEL 499
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ I+ + + V F+S+I LC R+M+A +F G P+ Y+ L++G
Sbjct: 500 ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCL 559
Query: 135 TGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKDENINPDVVT 182
G AL +F+ M S E V G +D+ LF +M I P +
Sbjct: 560 VGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTIL 619
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+ +I G A AK EM + G+ ++ T+N+++ L KN DEA L +
Sbjct: 620 YSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELR 679
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ V+ N NT++DG T RV AK+LF S+ V +YSI+I K +E
Sbjct: 680 AMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVE 739
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A ++ M + G +P+ + N + L + +++ RA ++ + + T +
Sbjct: 740 EAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLV 799
Query: 363 D 363
D
Sbjct: 800 D 800
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 175/384 (45%), Gaps = 13/384 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD ML P +FN+L A D + +F + G+ PD+ TY +I
Sbjct: 394 LFDLMLG-DGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 452
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C++G++ +++ P+ + LI+G C +++A L +++ G ++
Sbjct: 453 CRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 512
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
++++IN L + G + A N+F+ + + + G ++KA +F
Sbjct: 513 VFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDA 572
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M I P+VV Y +++ G+C +E L EM+ +G++P+ + +++I+D L + G+
Sbjct: 573 MVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGR 632
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
A M + G+ + YN ++ G + A LF + +M + + +
Sbjct: 633 TVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 692
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+I+G + + +E A L+ + + P+VV Y+ + L + VE A +F MQ G
Sbjct: 693 MIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 752
Query: 351 VAADTWTYRTFIDGLCKNSYIVEA 374
++ + L K + IV A
Sbjct: 753 CEPNSRLLNHVVRELLKKNEIVRA 776
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 115/284 (40%), Gaps = 50/284 (17%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFG-CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
IFD +N+ P V ++ G CL + L +F + S G+ P++ Y L+N
Sbjct: 534 IFDLTVNVGLHPDAVVYSMLMDGYCLVGK--MEKALRVFDAMVSAGIEPNVVVYCTLVNG 591
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM----------------- 104
+CK+GR+ G + +L+ P+ + ++ +I GL R +
Sbjct: 592 YCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMD 651
Query: 105 ------------------EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
EA LF +LR + N+ T NT+I+G+++T A +LF
Sbjct: 652 ICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFA 711
Query: 147 EMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
++ V EG V++A+++F M++ P+ V+R N
Sbjct: 712 SISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKN 771
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
+ A L ++ ++ +T +++D G E R L
Sbjct: 772 EIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 815
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 138/438 (31%), Positives = 219/438 (50%), Gaps = 49/438 (11%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP +++ + L K + D + +++ + G+ P+ +TYN LI + G+
Sbjct: 248 RGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKE 307
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
V + R P+ VTF L+ LC +I EA +F + + G P+VF+YN ++N
Sbjct: 308 AVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLN 367
Query: 131 GLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENIN 177
G G + +LF+ M G+G + G +DKA +F +M+D +
Sbjct: 368 GYATKGCLVDMTDLFDLML-GDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 426
Query: 178 PDVVTYTSVI-----------------------------------RGFCYANDWNEAKCL 202
P+V+TYT+VI +GFC +AK L
Sbjct: 427 PNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL 486
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
+ E+M+ G+ ++V F+ I++ LCK G++ +A + DL + +G+ P A VY+ LMDG+CL
Sbjct: 487 ISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCL 546
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G++ +A +F +M S G Y L+NGYCK I+ LSL+ EML KGIKP ++
Sbjct: 547 VGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 606
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
YN + LFE + A F EM G+A + TY + GL KN EA+ LF+ LR
Sbjct: 607 YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELR 666
Query: 383 ILKCELDIRAYNCLIDGL 400
+ ++DI N +I G+
Sbjct: 667 AMNVKIDIITLNTMIAGM 684
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 198/401 (49%), Gaps = 15/401 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF-V 73
P ++ IL C + + L+ F +L TGL D+ N L+ FC+ R +
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 168
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG--CEPNVFTYNTLING 131
+L R P+ +++ L+K LC + + +A L + G C P+V YNT+I+G
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDG 228
Query: 132 LYRTGHTIVALNLFEEMASGN--GEFGVEGFV----------DKAKELFLQMKDENINPD 179
++ G A +LF+EM +F V DKA+ QM ++ + P+
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
TY ++I G+ W EA + EM Q + P+VVTFN++M LCK GK+ EA + D
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFD 348
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M G P+ F YN +++G+ G + +LF M G + ++++LI Y
Sbjct: 349 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCG 408
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++ A+ ++ EM G+KP+V+ Y T+ L I +++ A + F++M GVA D + Y
Sbjct: 409 MLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 468
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I G C + +++A EL + LDI ++ +I+ L
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNL 509
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 184/384 (47%), Gaps = 20/384 (5%)
Query: 36 VLSLFKRLNSTG-----LFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTF 90
++LF R S L P +TY IL++C + R G++LR+ + +
Sbjct: 90 AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIA 149
Query: 91 TSLIKGLCAESRIMEA-AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
L+KG C R EA L + GC P+VF+Y+ L+ L G + A +L MA
Sbjct: 150 NHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA 209
Query: 150 SGNG--------------EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
G F EG V+KA +LF +M I PD VTY+SV+ C A
Sbjct: 210 EGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARA 269
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
++A+ L +M+++GV PN T+N ++ G+ EA R+ M + + P+ +N
Sbjct: 270 MDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNM 329
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
LM C G++ A+++F +M G VFSY+I++NGY + L+ ML G
Sbjct: 330 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDG 389
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
I P + +N L +++A +F+EM+ GV + TY T I LC+ + +A+
Sbjct: 390 IAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAM 449
Query: 376 ELFRTLRILKCELDIRAYNCLIDG 399
E F + D AY+CLI G
Sbjct: 450 EKFNQMIDQGVAPDKYAYHCLIQG 473
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 193/410 (47%), Gaps = 13/410 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M M+ P V S+NI+ A + LF + G+ P + T+N+LI +
Sbjct: 346 VFDTMA-MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAY 404
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
G + ++ + PN +T+T++I LC ++ +A F ++ G P+
Sbjct: 405 ANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 464
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQ 170
+ Y+ LI G G + A L E+ + + G V A+ +F
Sbjct: 465 YAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDL 524
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ ++P V Y+ ++ G+C +A + M+ G++PN V + +++ CK G+
Sbjct: 525 TVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGR 584
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+DE L M+Q G++P+ +YN ++DG GR AK F M G +YSI
Sbjct: 585 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSI 644
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
++ G KN+ + A+ L+ E+ + +K D++ NT+ +F+ +VE A LF + R G
Sbjct: 645 VLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSG 704
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ TY I L K + EA ++F +++ CE D R N ++ L
Sbjct: 705 LVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVREL 754
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 162/361 (44%), Gaps = 12/361 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L + D + F ++ G+ PD Y Y+ LI FC G + +
Sbjct: 427 PNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL 486
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ I+ + + V F+S+I LC R+M+A +F G P Y+ L++G
Sbjct: 487 ISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCL 546
Query: 135 TGHTIVALNLFEEMASGNGE-----FG--VEGF-----VDKAKELFLQMKDENINPDVVT 182
G AL +F+ M S E +G V G+ +D+ LF +M + I P +
Sbjct: 547 VGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 606
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I G A AK EM + G+ N T+++++ L KN DEA L +
Sbjct: 607 YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELR 666
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ V+ + NT++ G T RV AK+LF S+ G V +YSI+I K +E
Sbjct: 667 AMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVE 726
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A ++ M + G +PD + N + L + +++ RA ++ + + T +
Sbjct: 727 EAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLV 786
Query: 363 D 363
D
Sbjct: 787 D 787
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 104/248 (41%), Gaps = 13/248 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M++ P V + L K D LSLF+ + G+ P YNI+I+
Sbjct: 556 VFDAMVSAGIEPNDVV-YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 614
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
+ GR V + S N T++ +++GL EA LF +LR + ++
Sbjct: 615 FEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDI 674
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
T NT+I G+++T A +LF ++ EG V++A+++F
Sbjct: 675 ITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSS 734
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M++ PD V+R N+ A L ++ ++ +T +++D G
Sbjct: 735 MQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGT 794
Query: 231 MDEASRLL 238
E R L
Sbjct: 795 CREHIRFL 802
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 213/434 (49%), Gaps = 47/434 (10%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP V S+ + L + D LF + G+ P+ TYN L++ +C G+
Sbjct: 203 PPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIG 262
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ ++ R P+ VT+ +L+ LC R MEA +F + G +P+ Y TL++G
Sbjct: 263 IFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYA 322
Query: 134 RTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
G+ + L + M G + G VD+A F +M+ + ++P++V
Sbjct: 323 TEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIV 382
Query: 182 TYTSV-----------------------------------IRGFCYANDWNEAKCLLIEM 206
TY +V I G C + W++A+ L +EM
Sbjct: 383 TYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEM 442
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+ +G+ PN + FN +++ LCK G + A + DLM+++ V+ + Y TL+DG+CL G+V
Sbjct: 443 IGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKV 502
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ A +L M G +Y+ +INGYCKN IE A SL+ +M SKG+ P +VIY+T+
Sbjct: 503 DEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTI 562
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
LF+ ++ A +L+ M + G+ TY + GLC+N+ +A+ +F L ++
Sbjct: 563 LHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDF 622
Query: 387 ELDIRAYNCLIDGL 400
L R +N +ID L
Sbjct: 623 HLQNRTFNIMIDAL 636
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/359 (32%), Positives = 192/359 (53%), Gaps = 21/359 (5%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 95
LSLF R+ DL TY+I+I C + G + F LGR++R+ +T A+TF+ L+K
Sbjct: 84 ALSLFNRMPRA----DLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLK 139
Query: 96 GLCAESRIMEAAAL-FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE 154
GLC + R +A + ++ GC PN F+YN L+ GL + AL+L M + +
Sbjct: 140 GLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTR 199
Query: 155 FGV----------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
G EG +DKA LF +M D+ ++P+ +TY ++ G+C + E
Sbjct: 200 GGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKE 259
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A + +M GV+P+VVT+N +M LCKNG+ EA ++ D M++ G +P++ +Y TL+
Sbjct: 260 AIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLH 319
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G+ G + + +L M G + ++ILI Y K+ ++ A+ + +M +G+ P
Sbjct: 320 GYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHP 379
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
++V Y T+ L + +V+ A FD + +G+ + +RT I GLC +A EL
Sbjct: 380 NIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEEL 438
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 170/390 (43%), Gaps = 47/390 (12%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FNIL G AK+ D + F ++ GL P++ TY +++ C++G+V R++
Sbjct: 349 FNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLI 408
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
TPN V F +LI GLCA + +A L ++ G PN +NTL+N L + G
Sbjct: 409 SEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVT 468
Query: 140 VALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
A N+F+ M + + + ++G VD+A +L M + + P+ VTY ++I
Sbjct: 469 RAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTII 528
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVV------------------------------- 216
G+C +A L +M +GV P +V
Sbjct: 529 NGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIK 588
Query: 217 ----TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
T+N+I+ LC+N D+A R+ + I +N ++D GR + AK+L
Sbjct: 589 LPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDL 648
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
F S+ + G V +Y +++ + +E L+ + G D + N L L +
Sbjct: 649 FASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQ 708
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
+V +A ++ + + + T + +
Sbjct: 709 KGEVRKAGVYLSKIDENNFSLEASTAESLV 738
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 138/290 (47%), Gaps = 14/290 (4%)
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGN--------GEFGVEGFVDKAKELFLQMK 172
++F N+ ++ + R VAL+LF M + G G +D A ++
Sbjct: 65 SIFDLNSALSAVARES-PAVALSLFNRMPRADLCTYSIVIGCCSRAGHLDLAFAALGRVI 123
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNGKM 231
+T++ +++G C+ ++A + + M G PN ++N+++ LC +
Sbjct: 124 RTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRS 183
Query: 232 DEASRLLDLMIQIGVR----PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
+A LL M+ R P+ Y T+++G G++++A LF M G + +
Sbjct: 184 QQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCIT 243
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y+ L++GYC + + + A+ ++ +M G++PDVV YNTL V L + + A K+FD M
Sbjct: 244 YNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMV 303
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ G D+ Y T + G Y+V+ +L + + D +N LI
Sbjct: 304 KKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILI 353
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 137/438 (31%), Positives = 221/438 (50%), Gaps = 49/438 (11%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP + ++N + L K + D + +++ + + P+ +TYN LI + G+
Sbjct: 248 RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKE 307
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
V + R P+ VT + L+ LC +I EA +F + + G P+VF+YN ++N
Sbjct: 308 AVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLN 367
Query: 131 GLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENIN 177
G G + +LF+ M G+G + G +DKA +F +M+D +
Sbjct: 368 GYATKGCLVDMTDLFDLML-GDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 426
Query: 178 PDVVTYTSVI-----------------------------------RGFCYANDWNEAKCL 202
PDVVTY +VI +GFC +AK L
Sbjct: 427 PDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKEL 486
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
+ E+M+ G+ ++V F+ I++ LCK G++ +A + DL + +G+ P+A VY+ LMDG+CL
Sbjct: 487 ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCL 546
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G++ +A +F +M S G V Y L+NGYCK I+ LSL+ EML +GIKP ++
Sbjct: 547 VGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTIL 606
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
Y+ + LF+ + A F EM G+A D TY + GL KN EA+ LF+ LR
Sbjct: 607 YSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELR 666
Query: 383 ILKCELDIRAYNCLIDGL 400
+ +++I N +IDG+
Sbjct: 667 AMNVKINIITLNTMIDGM 684
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 196/401 (48%), Gaps = 15/401 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF-V 73
P ++ IL C + + L+ F +L TGL ++ N L+ FC+ R +
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 168
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG--CEPNVFTYNTLING 131
+L R P+ +++ L+K LC + + +A L + G C PNV YNT+I+G
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 228
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPD 179
++ G A +LF+EM + + +DKA+ QM ++ + P+
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 288
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
TY ++I G+ W EA + EM + P+VVT +++M LCK GK+ EA + D
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 348
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M G P+ F YN +++G+ G + +LF M G +++++LI Y
Sbjct: 349 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 408
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++ A+ ++ EM G+KPDVV Y T+ L I +++ A + F++M GVA D + Y
Sbjct: 409 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 468
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I G C + +++A EL + LDI ++ +I+ L
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 509
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 183/384 (47%), Gaps = 20/384 (5%)
Query: 36 VLSLFKRLNSTG-----LFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTF 90
++LF R S L P +TY IL++C + R G++LR+ N +
Sbjct: 90 AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIA 149
Query: 91 TSLIKGLCAESRIMEA-AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
L++G C R EA L + GC P+VF+Y+ L+ L G + A +L MA
Sbjct: 150 NHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA 209
Query: 150 SGNG--------------EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
G F EG V+KA +LF +M I PD+VTY SV+ C A
Sbjct: 210 EGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARA 269
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
++A+ L +M+++ V PN T+N ++ G+ EA R+ M + + P+ +
Sbjct: 270 MDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSM 329
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
LM C G++ A+++F +M G VFSY+I++NGY + L+ ML G
Sbjct: 330 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDG 389
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
I PD +N L +++A +F+EM+ GV D TYRT I LC+ + +A+
Sbjct: 390 IAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM 449
Query: 376 ELFRTLRILKCELDIRAYNCLIDG 399
E F + D AYNCLI G
Sbjct: 450 EKFNQMIDQGVAPDKYAYNCLIQG 473
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 195/410 (47%), Gaps = 13/410 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M M+ P V S+NI+ A + LF + G+ PD YT+N+LI +
Sbjct: 346 VFDTMA-MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAY 404
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
G + ++ + P+ VT+ ++I LC ++ +A F ++ G P+
Sbjct: 405 ANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 464
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQ 170
+ YN LI G G + A L E+ + + G V A+ +F
Sbjct: 465 YAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDL 524
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ ++PD V Y+ ++ G+C +A + M+ G++PNVV + +++ CK G+
Sbjct: 525 TVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGR 584
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+DE L M+Q G++P+ +Y+ ++DG GR AK F M G + +Y+I
Sbjct: 585 IDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNI 644
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
++ G KN+ + A+ L+ E+ + +K +++ NT+ +F+ +VE A LF + R
Sbjct: 645 VLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSR 704
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ TY I L K + EA ++F +++ CE + R N ++ L
Sbjct: 705 LVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVREL 754
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 162/361 (44%), Gaps = 12/361 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L + D + F ++ G+ PD Y YN LI FC G + +
Sbjct: 427 PDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKEL 486
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ I+ + + V F+S+I LC R+M+A +F G P+ Y+ L++G
Sbjct: 487 ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCL 546
Query: 135 TGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKDENINPDVVT 182
G AL +F+ M S E V G +D+ LF +M I P +
Sbjct: 547 VGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTIL 606
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+ +I G A AK EM + G+ ++ T+N+++ L KN DEA L +
Sbjct: 607 YSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELR 666
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ V+ N NT++DG T RV AK+LF S+ +V +YSI+I K +E
Sbjct: 667 AMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVE 726
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A ++ M + G +P+ + N + L + +++ RA ++ + + T +
Sbjct: 727 EAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLV 786
Query: 363 D 363
D
Sbjct: 787 D 787
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 174/384 (45%), Gaps = 13/384 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD ML P +FN+L A D + +F + G+ PD+ TY +I
Sbjct: 381 LFDLMLG-DGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 439
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C++G++ +++ P+ + LI+G C +++A L +++ G ++
Sbjct: 440 CRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 499
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
++++IN L + G + A N+F+ + + + G ++KA +F
Sbjct: 500 VFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDA 559
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M I P+VV Y +++ G+C +E L EM+ +G++P+ + +++I+D L + G+
Sbjct: 560 MVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGR 619
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
A M + G+ + YN ++ G + A LF + +M + + +
Sbjct: 620 TVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 679
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+I+G + + +E A L+ + + P VV Y+ + L + VE A +F MQ G
Sbjct: 680 MIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739
Query: 351 VAADTWTYRTFIDGLCKNSYIVEA 374
++ + L K + IV A
Sbjct: 740 CEPNSRLLNHVVRELLKKNEIVRA 763
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 115/284 (40%), Gaps = 50/284 (17%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFG-CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
IFD +N+ P V ++ G CL + L +F + S G+ P++ Y L+N
Sbjct: 521 IFDLTVNVGLHPDAVVYSMLMDGYCLVGK--MEKALRVFDAMVSAGIEPNVVVYCTLVNG 578
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM----------------- 104
+CK+GR+ G + +L+ P+ + ++ +I GL R +
Sbjct: 579 YCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMD 638
Query: 105 ------------------EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
EA LF +LR + N+ T NT+I+G+++T A +LF
Sbjct: 639 ICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFA 698
Query: 147 EMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
++ V EG V++A+++F M++ P+ V+R N
Sbjct: 699 SISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKN 758
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
+ A L ++ ++ +T +++D G E R L
Sbjct: 759 EIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802
>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 529
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 136/419 (32%), Positives = 216/419 (51%), Gaps = 26/419 (6%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
+L+ + P + F + G L K HY V+SL +++ GL +L T +ILINC+ ++G
Sbjct: 2 LLHHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLG 61
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ + F V IL+ + +A+TFT+LIKGLC + I +A K+ G + N +Y
Sbjct: 62 QNALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYG 121
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDE 174
TLINGL + G T AL + + V + V+ A L+ +M +
Sbjct: 122 TLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAK 181
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
I P VVTY ++I G C +A LL +M+ + + P V TF++++D CK GKM EA
Sbjct: 182 RICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEA 241
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-----ESMGCTHTVF--- 286
+ +M++ V+PN YN+LMDG L V +AK +F +M E+M +
Sbjct: 242 KNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQ 301
Query: 287 ------SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
Y+ LI+G CK+ AL GEM +G PD+ YN+L L + + V++A
Sbjct: 302 IYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAI 361
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+L +++ G+ TY I+GLCK+ + +A ++F L + D+ YN +I G
Sbjct: 362 ELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKG 420
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 177/365 (48%), Gaps = 16/365 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N + L K+K + +L+ + + + P + TYN LI C M ++ +
Sbjct: 150 PDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGL 209
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ P TF+ LI C E ++ EA +F + +PN+ TYN+L++G +
Sbjct: 210 LHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHL 269
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
A ++F M VD+A LF +M + I PD+V Y S+I G C +
Sbjct: 270 VNVVKKAKSIFNTMIK---------MVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSG 320
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
A + EM +G P++ T+N ++D LCKN +D+A LL + G++P+ YN
Sbjct: 321 RTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYN 380
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L++G C +GR+ A+++F + G V++Y+ +I G+CK + L++ +M
Sbjct: 381 ILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDS 440
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM------QRDGVAADTWTYRTFIDGLCKN 368
G PD + LF+ + ++A K F EM R+ A+ + +
Sbjct: 441 GCSPDAKNCEIIIRSLFDKGENDKAGK-FREMIVRGKCHREAPASTIRKRHPLVTVIANR 499
Query: 369 SYIVE 373
S +V+
Sbjct: 500 STVVD 504
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 172/373 (46%), Gaps = 26/373 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+F L L L ++ + G + +Y LIN CK+G+ L RI
Sbjct: 84 TFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKVGQTRAALEFLRRI 143
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
P+ V + ++I GLC + + +A L+ ++ P+V TYNTLI GL
Sbjct: 144 DGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQL 203
Query: 139 IVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
A+ L +M + F EG + +AK +F M E++ P++VTY S+
Sbjct: 204 KDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSL 263
Query: 187 IRGFCYANDWNEAKCL---LIEMMDQG-----------VQPNVVTFNVIMDELCKNGKMD 232
+ G N +AK + +I+M+D+ + P++V +N ++D LCK+G+
Sbjct: 264 MDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTP 323
Query: 233 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
A + + M G P+ F YN+L+D C V++A EL ++ G +V +Y+ILI
Sbjct: 324 YALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILI 383
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
NG CK+ ++ A ++ ++L KG DV YN + + + + +M+ G +
Sbjct: 384 NGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCS 443
Query: 353 ADTWTYRTFIDGL 365
D I L
Sbjct: 444 PDAKNCEIIIRSL 456
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 69/144 (47%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
++ R PP + ++N L L KN H D + L +L G+ P + TYNILIN CK GR
Sbjct: 332 MHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGR 391
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ V +L + + T+ ++IKG C + E A+ +K++ GC P+
Sbjct: 392 LKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEI 451
Query: 128 LINGLYRTGHTIVALNLFEEMASG 151
+I L+ G A E + G
Sbjct: 452 IIRSLFDKGENDKAGKFREMIVRG 475
>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 447
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 138/397 (34%), Positives = 215/397 (54%), Gaps = 21/397 (5%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML MR +PP + FN + AK KHY TV SL RL G+ PDL+T NILINCFC
Sbjct: 47 FNRMLCMRHTPP-IIQFNKILDSFAKMKHYSTV-SLSHRLELKGIQPDLFTLNILINCFC 104
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
MG+++ GF VL +IL+ + P+ VT +LIKGLC + ++ +A KL G + N
Sbjct: 105 HMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQV 164
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQM 171
Y TLING+ + G T A+ L +++ + V + V +A LF +M
Sbjct: 165 GYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEM 224
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+ DVVTY ++I GFC EA LL M+ + + P+V T+ +++D LCK GK+
Sbjct: 225 TVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKV 284
Query: 232 DEASR-------LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
EA R L+D M G + Y++L+DG C G ++RA LF M+ G
Sbjct: 285 KEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPN 344
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
+F+++IL++G K ++ A ++ ++L+KG +V YN + + +E A +
Sbjct: 345 MFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLS 404
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+M+ +G + +T+ T I L K +A +L R +
Sbjct: 405 KMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 441
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 151/331 (45%), Gaps = 31/331 (9%)
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
R+L TP + F ++ A+ + +L +L + G +P++FT N LIN G
Sbjct: 49 RMLCMRHTPPIIQFNKILDSF-AKMKHYSTVSLSHRLELKGIQPDLFTLNILINCFCHMG 107
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
++ ++ G+ P VT ++I+G C
Sbjct: 108 QITFGFSVLAKILK-------RGY----------------PPSTVTLNTLIKGLCLKGQV 144
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+A +++ QG Q N V + +++ +CK G A +LL + +P+ +Y+T+
Sbjct: 145 KKALHFHDKLLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTI 204
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+D C V+ A LF M G + V +Y+ LI G+C +++ A+ L M+ K I
Sbjct: 205 IDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTI 264
Query: 317 KPDVVIYNTLFVVLFEIHQVERA-------FKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
PDV Y L L + +V+ A + L DEM+ G AD TY + IDGLCKN
Sbjct: 265 NPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNG 324
Query: 370 YIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++ A+ LF ++ ++ + L+DGL
Sbjct: 325 HLDRAIALFNKMKDQGIRPNMFTFTILLDGL 355
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 115/240 (47%), Gaps = 1/240 (0%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
VD A F +M P ++ + ++ F ++ L + +G+QP++ T N+
Sbjct: 40 VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTV-SLSHRLELKGIQPDLFTLNI 98
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C G++ +L +++ G P+ NTL+ G CL G+V +A + + G
Sbjct: 99 LINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 158
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
Y LING CK + A+ L ++ + KPDVV+Y+T+ L + V A+
Sbjct: 159 FQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAY 218
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LF EM G++AD TY T I G C + EA+ L + + D+ Y L+D L
Sbjct: 219 GLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDAL 278
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 134/401 (33%), Positives = 208/401 (51%), Gaps = 25/401 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ +F+ ML+ SP + +NIL AK D L++ + S GL P +YTYN L+N
Sbjct: 28 YKLFEQMLDNGISPDGI-EYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLN 86
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA-AALFTKLRVFGCE 119
FCK ++ + + F P+ VT++++I GLC ++ EA LF K+ GC
Sbjct: 87 AFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCS 146
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPD 179
N YN LINGL + + A L EEMAS +G+V PD
Sbjct: 147 ANTVAYNALINGLCKDENIERAYKLLEEMAS-------KGYV----------------PD 183
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
+TY +++ G C +EAK M +G P+VV +N ++D L K GK DEA +L
Sbjct: 184 NITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFK 243
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
+I G P+ YN+++ G ++ A+E+F M + GC +YSI+++G+C+ K
Sbjct: 244 DVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAK 303
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
+++ A + EM G PDVV YN L L + + V++A +LF M +G A D +Y
Sbjct: 304 KVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYS 363
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++GLCK + + +A LF + K D+ +N L+DGL
Sbjct: 364 VVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGL 404
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 177/355 (49%), Gaps = 13/355 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLS-LFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P V +++ + L K L LF ++ G + YN LIN CK + +
Sbjct: 111 PDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYK 170
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L + + P+ +T+ +++ GLC ++ EA F + G P+V YN L++ LY
Sbjct: 171 LLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALY 230
Query: 134 RTGHTIVALNLFEE-MASGNGEFGV-----------EGFVDKAKELFLQMKDENINPDVV 181
+ G T A+ LF++ +A G V + +D+A+E+F +M P+
Sbjct: 231 KEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGA 290
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY+ V+ G C A ++A +L EM G P+VVT+N+++D LCK +D+A L M
Sbjct: 291 TYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM 350
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G P+ Y+ +++G C T +V+ A+ LF M V +++IL++G CK ++
Sbjct: 351 VDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKL 410
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
+ A L +M G PD V YNTL L + + +A +L M+ G +D +
Sbjct: 411 DEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 465
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 121/260 (46%), Gaps = 13/260 (5%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
FD M + R P V ++N L L K D + LFK + + G PD TYN ++
Sbjct: 207 FDSMPS-RGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLA 265
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ + + +++ S PN T++ ++ G C ++ +A + ++ G P+V
Sbjct: 266 RKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVV 325
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQM 171
TYN L++GL +T A LF M + + V A+ LF +M
Sbjct: 326 TYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRM 385
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ + PDVVT+ ++ G C A +EAK LL +M G P+ V +N +M+ L K G+
Sbjct: 386 IERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRH 445
Query: 232 DEASRLLDLMIQIGVRPNAF 251
+A RL M + G + F
Sbjct: 446 IQADRLTQAMKEKGFLSDCF 465
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 134/435 (30%), Positives = 218/435 (50%), Gaps = 49/435 (11%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP V ++ + L K + D +F+++ G+ PD TYN LI+ + G+
Sbjct: 193 PPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQ 252
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L + P+ +T+ L+ LC R EA F + G +P+V Y L++G Y
Sbjct: 253 MLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHG-Y 311
Query: 134 RTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDV 180
T + ++ F ++ GNG + + +++A +F +M+ + ++PDV
Sbjct: 312 ATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDV 371
Query: 181 VTY-----------------------------------TSVIRGFCYANDWNEAKCLLIE 205
V++ +S++ G C W +A+ L E
Sbjct: 372 VSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFE 431
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
++DQG+ + V FN +M LC G++ EA RL+DLMI++GVRPN YNTL+ G CLTGR
Sbjct: 432 VLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGR 491
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
++ A +L M S G F+Y+IL+ GYCK + ++ A SL+ EML KG+ P V YNT
Sbjct: 492 IDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNT 551
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
+ LF+ + A +L+ M D +TY ++GLCKN+++ EA ++FR L
Sbjct: 552 ILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKD 611
Query: 386 CELDIRAYNCLIDGL 400
+LD +N +I L
Sbjct: 612 PQLDSVTFNIMIGAL 626
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/395 (32%), Positives = 207/395 (52%), Gaps = 20/395 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAK---NKHYDTVLSLFKRLN---STGLFPDLYTYN 56
+FD +L+ P V +FN L +++ + + V+SLF R+ S+ + P+ TY+
Sbjct: 36 LFDELLHC-ARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNACTYS 94
Query: 57 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA-ALFTKLRV 115
ILI CFC+MGR+ HGF G IL++ + N + + L+KGLC R+ EA L ++
Sbjct: 95 ILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSE 154
Query: 116 FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDK 163
FGC P+V YNT+ING +R G A NLF EM V + VD+
Sbjct: 155 FGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDR 214
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
AK +F QM D + PD TY +I G+ W E +L EM G++P+ +T+ +++D
Sbjct: 215 AKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLD 274
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
LCKNG+ EA D M + G++P+ +Y L+ G+ G ++ M G +
Sbjct: 275 YLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSP 334
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
++I+ Y K IE A+ ++ +M +G+ PDVV + L L ++ +V+ A F
Sbjct: 335 NRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQF 394
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
++M +GV + + + + + GLC +A ELF
Sbjct: 395 NQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELF 429
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 176/362 (48%), Gaps = 23/362 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FNI+F AK + + +F ++ GL PD+ ++ LI+ CK+GRV + +++
Sbjct: 339 FNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMI 398
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
TPN F+SL+ GLC + +A LF ++ G + +NTL+ L
Sbjct: 399 NEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCN----- 453
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
EG V +A+ L M + P+V++Y +++ G C +EA
Sbjct: 454 ------------------EGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEA 495
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
LL M+ G++PN T+ +++ CK ++D+A L M+ GV P YNT++ G
Sbjct: 496 AKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHG 555
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
TGR + A EL+++M + +++Y+I++NG CKN ++ A ++ + SK + D
Sbjct: 556 LFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLD 615
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
V +N + L + + E A LF + G+ D TYR + L + + E LF
Sbjct: 616 SVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFS 675
Query: 380 TL 381
+
Sbjct: 676 AM 677
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 186/397 (46%), Gaps = 24/397 (6%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
FD M + P V + IL A + S + G+ P+ +NI+ +
Sbjct: 289 FDSMFR-KGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYA 347
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K + + ++ + +P+ V+F +LI LC R+ +A F ++ G PN+F
Sbjct: 348 KKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIF 407
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
+++L+ GL G +KA+ELF ++ D+ I D V +
Sbjct: 408 VFSSLVYGLCTVGKW-----------------------EKAEELFFEVLDQGICVDAVFF 444
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
+++ C EA+ L+ M+ GV+PNV+++N ++ C G++DEA++LLD+M+
Sbjct: 445 NTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVS 504
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G++PN F Y L+ G+C RV+ A LF M G T V +Y+ +++G +
Sbjct: 505 NGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSE 564
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A LY M++ K D+ YN + L + + V+ AFK+F + D+ T+ I
Sbjct: 565 ANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIG 624
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
L K +A++LF T+ D+ Y + + L
Sbjct: 625 ALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENL 661
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 24/222 (10%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ +F ML M+ P V ++N + L + + L+ + ++ D+YTYNI++N
Sbjct: 531 YSLFREML-MKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILN 589
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK V F + R+ ++VTF +I L R +A LF + +G P
Sbjct: 590 GLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVP 649
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
+V TY ++A NL EE GEF LF M+ P+
Sbjct: 650 DVVTYR------------LIAENLIEE--GSLGEF---------DGLFSAMEKSGTAPNS 686
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
+++R + D + A L ++ ++ T ++++
Sbjct: 687 HMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLI 728
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 123/394 (31%), Positives = 206/394 (52%), Gaps = 26/394 (6%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
+L + P V ++N+L K+ D L + R+N + PD+ TYN ++ C G
Sbjct: 117 ILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSG 173
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
++ VL R L+ P+ +T+T LI+ C ES + +A L ++R G +P+V TYN
Sbjct: 174 KLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYN 233
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
LING+ + EG +D+A + M P+V+T+ +
Sbjct: 234 VLINGICK-----------------------EGRLDEAIKFLNNMPSYGCQPNVITHNII 270
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
+R C W +A+ LL +M+ +G P+VVTFN++++ LC+ G + A +L+ M G
Sbjct: 271 LRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGC 330
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
PN+ YN L+ GFC +++RA E M S GC + +Y+ L+ CK+ +++ A+
Sbjct: 331 TPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVE 390
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
+ ++ SKG P ++ YNT+ L ++ + ERA KL DEM+R G+ D TY + + GL
Sbjct: 391 ILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLS 450
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + EA++ F L L + YN ++ GL
Sbjct: 451 REGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGL 484
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 182/379 (48%), Gaps = 44/379 (11%)
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
G + GF L ++ P+ + TSLI+G C + +A + L G P+V TY
Sbjct: 71 GELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITY 130
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGNG---------EFGVEGFVDKAKELFLQMKDENI 176
N LI+G ++G AL + + M G + +A E+ + +
Sbjct: 131 NVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKEC 190
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
PDV+TYT +I C + +A LL EM ++G +P+VVT+NV+++ +CK G++DEA +
Sbjct: 191 YPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIK 250
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN--- 293
L+ M G +PN +N ++ C TGR A++L M GC+ +V +++ILIN
Sbjct: 251 FLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLC 310
Query: 294 --------------------------------GYCKNKEIEGALSLYGEMLSKGIKPDVV 321
G+CK K+++ A+ M+S+G PD+V
Sbjct: 311 RQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIV 370
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
YNTL L + +V+ A ++ +++ G + TY T IDGL K A++L +
Sbjct: 371 TYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEM 430
Query: 382 RILKCELDIRAYNCLIDGL 400
R + DI Y+ L+ GL
Sbjct: 431 RRKGLKPDIITYSSLVSGL 449
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 168/353 (47%), Gaps = 12/353 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ IL K + L + + G PD+ TYN+LIN CK GR+
Sbjct: 192 PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 251
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + PN +T +++ +C+ R M+A L + + GC P+V T+N LIN L R
Sbjct: 252 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR 311
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G A+++ E+M F E +D+A E M PD+VT
Sbjct: 312 QGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 371
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++ C + A +L ++ +G P ++T+N ++D L K GK + A +LLD M
Sbjct: 372 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 431
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G++P+ Y++L+ G G+V+ A + F +E +G +Y+ ++ G CK+++ +
Sbjct: 432 RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTD 491
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
A+ M+SK KP Y L + + A L +E+ G+ +
Sbjct: 492 RAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKS 544
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 160/326 (49%), Gaps = 13/326 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M N + S P V ++N+L + K D + + S G P++ T+NI++
Sbjct: 216 LLDEMRN-KGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSM 274
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C GR +L +LR +P+ VTF LI LC + + A + K+ + GC PN
Sbjct: 275 CSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNS 334
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
+YN L++G + A+ + M S +G VD A E+ Q
Sbjct: 335 LSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 394
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ + +P ++TY +VI G A LL EM +G++P+++T++ ++ L + GK
Sbjct: 395 LSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGK 454
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+DEA + + +G+RPNA YN++M G C + + +RA + M S C T +Y+I
Sbjct: 455 VDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTI 514
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGI 316
LI G + AL L E+ S+G+
Sbjct: 515 LIEGIAYEGLAKEALDLLNELCSRGL 540
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 97/179 (54%), Gaps = 3/179 (1%)
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
+ L +NG++++ + L+ M+ G P+ +L+ GFC G+ +A + +E G
Sbjct: 64 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
V +Y++LI+GYCK+ EI+ AL + M + PDVV YNT+ L + ++++A +
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 180
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ D + D TY I+ CK S + +A++L +R + D+ YN LI+G+
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGI 239
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 131/397 (32%), Positives = 206/397 (51%), Gaps = 24/397 (6%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
FD ML+ P V ++NIL L H LS+ + + G P++ TYN L+ F
Sbjct: 138 FDSMLS-DGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFF 196
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ G V ++G +L PN VTF S++ G+C ++ +A +F ++ G P+
Sbjct: 197 RAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGV 256
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
+YNTL+ G + G + AL++F EM + I PDVVT+
Sbjct: 257 SYNTLVGGYCKAGCSHEALSVFAEMT-----------------------QKGIMPDVVTF 293
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
TS+I C A + A L+ +M ++G+Q N VTF ++D CK G +D+A + M Q
Sbjct: 294 TSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQ 353
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
++P+ YN L++G+C+ GR++ A+EL ME+ G V +YS +I+ YCKN +
Sbjct: 354 CRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHS 413
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A L +ML KG+ PD + Y++L VL E ++ A LF M + G+ D +TY + ID
Sbjct: 414 AFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLID 473
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G CK + A+ L + D+ Y+ LI+GL
Sbjct: 474 GHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGL 510
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 119/446 (26%), Positives = 197/446 (44%), Gaps = 74/446 (16%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+ +P V S+N L G K LS+F + G+ PD+ T+ LI+
Sbjct: 242 VFDEMMREGLAPDGV-SYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVM 300
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G + ++ ++ N VTFT+LI G C + + +A +R +P+V
Sbjct: 301 CKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSV 360
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
YN LING + + G +D+A+EL +M+ + + PDVVT
Sbjct: 361 VCYNALING-----------------------YCMVGRMDEARELLHEMEAKGLKPDVVT 397
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+++I +C D + A L +M+++GV P+ +T++ ++ LC+ ++ +A L MI
Sbjct: 398 YSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMI 457
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY------- 295
++G++P+ F Y +L+DG C G V RA L M G V +YS+LING
Sbjct: 458 KLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAM 517
Query: 296 ---------------------------CKNKEIEGALSL----------------YGEML 312
C+ E++ L+L Y ML
Sbjct: 518 EAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSML 577
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
+ D +Y+ L V +A +M + G A ++ + + I GL +N +V
Sbjct: 578 DRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVV 637
Query: 373 EAVELFRTLRILKCELDIRAYNCLID 398
EA ++ + L D A LID
Sbjct: 638 EADQVIQQLLNCCSLADAEASKALID 663
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 140/283 (49%), Gaps = 24/283 (8%)
Query: 117 GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI 176
G P+V YN ++ L + + A+ F M + +
Sbjct: 111 GYVPSVLAYNAVLLALS------------------------DASLTSARRFFDSMLSDGV 146
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
P+V TY +IR C EA +L +M G PNVVT+N ++ + G++D A R
Sbjct: 147 APNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAER 206
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
L+ +M+ G++PN +N++++G C G++ A+++F M G SY+ L+ GYC
Sbjct: 207 LVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYC 266
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K ALS++ EM KGI PDVV + +L V+ + +E A L +M+ G+ +
Sbjct: 267 KAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEV 326
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
T+ IDG CK ++ +A+ R +R + + + YN LI+G
Sbjct: 327 TFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALING 369
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 130/293 (44%), Gaps = 27/293 (9%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ + KN + L +++ G+ PD TY+ LI C+ R+S V+
Sbjct: 393 PDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVL 452
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ P+ T+TSLI G C E + A +L K+ G P+V TY+ LINGL +
Sbjct: 453 FKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSK 512
Query: 135 TGHTIVALNLF-----EEMASGNGE----------------------FGVEGFVDKAKEL 167
+ + A L EE N + F ++G +++A ++
Sbjct: 513 SARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKV 572
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
+ M D N N D Y+ +I G C A + +A +M+ +G PN + ++ L +
Sbjct: 573 YQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFE 632
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
NG + EA +++ ++ +A L+D G V+ ++ M G
Sbjct: 633 NGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDG 685
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 228 bits (580), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 147/430 (34%), Positives = 222/430 (51%), Gaps = 49/430 (11%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNST-GLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
FN L L K K Y+ V+SL+ L S + P L T++ILIN F ++G++ F +LG I
Sbjct: 72 FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
L+ F + T+L+KGLC + R++EA +L + G + Y T+INGL + G T
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191
Query: 139 IVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
A+ +F +M +G VD+A L +M + I DV +Y S+
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251
Query: 187 IRGFCYANDWNEAKCLLIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
I GFC + A LL EM+ +G V P+V TFN+++D LCK G++ EA ++ +MI+ G
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRG 311
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
+P+ YN LM+G+CL+G V AK++F M V SY LINGYCK + ++ A+
Sbjct: 312 WKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAM 371
Query: 306 SLYGEMLSKGIKPDVVIYNTLF--------------------------------VVL--- 330
L EM +K + PD V YN L V+L
Sbjct: 372 VLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDY 431
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
F+ + ++A LF + G++ + TY +DGLCK+ + A E+F+ L C+ +I
Sbjct: 432 FKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNI 491
Query: 391 RAYNCLIDGL 400
R YN +I GL
Sbjct: 492 RTYNIMIHGL 501
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 176/355 (49%), Gaps = 13/355 (3%)
Query: 37 LSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 96
+SL G D Y +IN CK+G+ + ++ + PN + + ++I G
Sbjct: 160 VSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDG 219
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG 156
LC + + EA L T++ G E +V++YN++I+G G A+ L +EM +
Sbjct: 220 LCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYP 279
Query: 157 --------VEGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
++G V +A + M PD+V+Y +++ G+C + EAK +
Sbjct: 280 DVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVF 339
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
+M+++ PNV+++ +++ CK +DEA LL M + P+ YN L+DG +
Sbjct: 340 DKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKS 399
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
GR +L +M + G + +Y++L++ Y K+++ + AL+L+ ++ GI P++ Y
Sbjct: 400 GRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTY 459
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
N L L + +++ A ++F + G + TY I GLCK ++ EA L
Sbjct: 460 NILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALL 514
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 181/363 (49%), Gaps = 16/363 (4%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
VC I+ G K D + +F ++ ++P+L YN +I+ CK G V +
Sbjct: 176 VCYGTIINGLCKIGKTRDAI-QMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCT 234
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPNVFTYNTLINGLYRT 135
++ + + ++ S+I G C+ R A L ++ V G P+V+T+N LI+GL +
Sbjct: 235 EMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKL 294
Query: 136 GHTIVALNLFEEM-------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G A N+ M A NG + + G V +AK++F +M + P+V++
Sbjct: 295 GRVSEAYNVVAVMIKRGWKPDIVSYNALMNG-YCLSGSVGEAKQVFDKMVERTALPNVIS 353
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G+C +EA LL EM ++ + P+ VT+N ++D L K+G+ L++ M
Sbjct: 354 YCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMR 413
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G + YN L+D + + ++A LF + +G + + +Y+IL++G CK+ ++
Sbjct: 414 ASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLK 473
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A ++ + +KG +P++ YN + L + ++ A L +M + + T+ T +
Sbjct: 474 YAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIV 533
Query: 363 DGL 365
+
Sbjct: 534 RAI 536
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 23/175 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L L+K+ L + + ++G DL TYN+L++ + K + +
Sbjct: 384 PDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALAL 443
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
I+ +PN T+ L+ GLC R+ A +F L GC+PN+ TYN +I+GL +
Sbjct: 444 FQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCK 503
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRG 189
EGF+D+A+ L +M + N P+ +T+ +++R
Sbjct: 504 -----------------------EGFLDEAEALLYKMVNNNYLPNYITFDTIVRA 535
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
Query: 4 FDYMLNMRPS--PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
+D + MR S P + ++N+L K++ +D L+LF+ + G+ P++ TYNIL++
Sbjct: 406 WDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDG 465
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK GR+ + + + PN T+ +I GLC E + EA AL K+ PN
Sbjct: 466 LCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPN 525
Query: 122 VFTYNTLINGL 132
T++T++ +
Sbjct: 526 YITFDTIVRAI 536
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 228 bits (580), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 123/394 (31%), Positives = 206/394 (52%), Gaps = 26/394 (6%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
+L + P V ++N+L K+ D L + R+N + PD+ TYN ++ C G
Sbjct: 174 ILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSG 230
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
++ VL R L+ P+ +T+T LI+ C ES + +A L ++R G +P+V TYN
Sbjct: 231 KLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYN 290
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
LING+ + EG +D+A + M P+V+T+ +
Sbjct: 291 VLINGICK-----------------------EGRLDEAIKFLNNMPSYGCQPNVITHNII 327
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
+R C W +A+ LL +M+ +G P+VVTFN++++ LC+ G + A +L+ M G
Sbjct: 328 LRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGC 387
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
PN+ YN L+ GFC +++RA E M S GC + +Y+ L+ CK+ +++ A+
Sbjct: 388 TPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVE 447
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
+ ++ SKG P ++ YNT+ L ++ + ERA KL DEM+R G+ D TY + + GL
Sbjct: 448 ILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLS 507
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + EA++ F L L + YN ++ GL
Sbjct: 508 REGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGL 541
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 182/379 (48%), Gaps = 44/379 (11%)
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
G + GF L ++ P+ + TSLI+G C + +A + L G P+V TY
Sbjct: 128 GELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITY 187
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGNG---------EFGVEGFVDKAKELFLQMKDENI 176
N LI+G ++G AL + + M G + +A E+ + +
Sbjct: 188 NVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKEC 247
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
PDV+TYT +I C + +A LL EM ++G +P+VVT+NV+++ +CK G++DEA +
Sbjct: 248 YPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIK 307
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN--- 293
L+ M G +PN +N ++ C TGR A++L M GC+ +V +++ILIN
Sbjct: 308 FLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLC 367
Query: 294 --------------------------------GYCKNKEIEGALSLYGEMLSKGIKPDVV 321
G+CK K+++ A+ M+S+G PD+V
Sbjct: 368 RQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIV 427
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
YNTL L + +V+ A ++ +++ G + TY T IDGL K A++L +
Sbjct: 428 TYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEM 487
Query: 382 RILKCELDIRAYNCLIDGL 400
R + DI Y+ L+ GL
Sbjct: 488 RRKGLKPDIITYSSLVSGL 506
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 168/353 (47%), Gaps = 12/353 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ IL K + L + + G PD+ TYN+LIN CK GR+
Sbjct: 249 PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 308
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + PN +T +++ +C+ R M+A L + + GC P+V T+N LIN L R
Sbjct: 309 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR 368
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G A+++ E+M F E +D+A E M PD+VT
Sbjct: 369 QGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 428
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++ C + A +L ++ +G P ++T+N ++D L K GK + A +LLD M
Sbjct: 429 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 488
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G++P+ Y++L+ G G+V+ A + F +E +G +Y+ ++ G CK+++ +
Sbjct: 489 RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTD 548
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
A+ M+SK KP Y L + + A L +E+ G+ +
Sbjct: 549 RAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKS 601
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 160/326 (49%), Gaps = 13/326 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M N + S P V ++N+L + K D + + S G P++ T+NI++
Sbjct: 273 LLDEMRN-KGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSM 331
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C GR +L +LR +P+ VTF LI LC + + A + K+ + GC PN
Sbjct: 332 CSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNS 391
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
+YN L++G + A+ + M S +G VD A E+ Q
Sbjct: 392 LSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 451
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ + +P ++TY +VI G A LL EM +G++P+++T++ ++ L + GK
Sbjct: 452 LSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGK 511
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+DEA + + +G+RPNA YN++M G C + + +RA + M S C T +Y+I
Sbjct: 512 VDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTI 571
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGI 316
LI G + AL L E+ S+G+
Sbjct: 572 LIEGIAYEGLAKEALDLLNELCSRGL 597
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 97/179 (54%), Gaps = 3/179 (1%)
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
+ L +NG++++ + L+ M+ G P+ +L+ GFC G+ +A + +E G
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
V +Y++LI+GYCK+ EI+ AL + M + PDVV YNT+ L + ++++A +
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 237
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ D + D TY I+ CK S + +A++L +R + D+ YN LI+G+
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGI 296
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 227 bits (579), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 132/410 (32%), Positives = 207/410 (50%), Gaps = 36/410 (8%)
Query: 3 IFDYMLNMRPS------PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYN 56
+F ML+ R P V ++++L L K + L + + + G PD+ TY
Sbjct: 171 LFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYT 230
Query: 57 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF 116
IL++ CK +V+ + VL +L + PN VT+ SL+ GLC R+ +A AL +
Sbjct: 231 ILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCR 290
Query: 117 GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI 176
GC PNV TY TLI+GL + G V A + M D+
Sbjct: 291 GCTPNVVTYGTLIDGLCKVGR-----------------------VKDACAMLADMIDKGG 327
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
PD++ Y +I G C A+ +E+ LL + G++P+VVT++ ++ LC++ ++DEA R
Sbjct: 328 TPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACR 387
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
LL + G P+ +Y+TL+DG C G+V+ A +L+ M GC V +YS LI+G C
Sbjct: 388 LLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLC 447
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K ++ A L M+ G P + YN+L L +++ ++ A +L +EM+R A
Sbjct: 448 KAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAV 507
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKC------ELDIRAYNCLIDGL 400
TY I G+C+ + AV L + +C LD AY+ LIDGL
Sbjct: 508 TYNILIHGMCRMERVDSAVVLLEQAKA-RCVAAGGTALDTIAYSSLIDGL 556
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/405 (33%), Positives = 203/405 (50%), Gaps = 19/405 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +IL L K K L F+ + +G+ D Y L++ K R+ +
Sbjct: 42 PNVFLCSILIDGLCKAKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAI 101
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + PN VT+ SLI GLC + A LF ++ C P++ TYNTL++GL+R
Sbjct: 102 LHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFR 161
Query: 135 TGHTIVALNLFEEMASGNGE--------------FGVEGF-----VDKAKELFLQMKDEN 175
TG A+ LF+EM ++G V +A EL MK
Sbjct: 162 TGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARG 221
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+PDV+TYT ++ G C + A +L EM+D G PN+VT+N ++ LC+ ++ +A
Sbjct: 222 CSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDAL 281
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
L+ M G PN Y TL+DG C GRV A + M G T + Y++LING
Sbjct: 282 ALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGL 341
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
CK +++ +++L +S GIKPDVV Y+++ L ++++ A +L ++ G D
Sbjct: 342 CKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDV 401
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Y T IDGLCK + EA +L+ + C+ D+ Y+ LIDGL
Sbjct: 402 ILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGL 446
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 133/406 (32%), Positives = 204/406 (50%), Gaps = 21/406 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L + D F + S L P+++ +ILI+ CK R
Sbjct: 7 PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ S + V +T+L+ GL E R+ +A A+ ++R GCEPNV TYN+LI+GL +
Sbjct: 67 FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQM-------KDE 174
A LFE M S +G F G +++A LF +M D+
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRT-GKLERAMALFQEMLDRRSHDMDD 185
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
+P+V+TY+ +I G C AN ++A LL M +G P+V+T+ +++D LCK K+ A
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+L M+ G PN YN+L+ G C RV+ A L M GCT V +Y LI+G
Sbjct: 246 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 305
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
CK ++ A ++ +M+ KG PD++IYN L L + QV+ + L G+ D
Sbjct: 306 LCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPD 365
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY + I GLC+++ + EA L ++ C D+ Y+ LIDGL
Sbjct: 366 VVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGL 411
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 124/406 (30%), Positives = 200/406 (49%), Gaps = 21/406 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L KN D LF+ + S P + TYN L++ + G++ +
Sbjct: 112 PNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMAL 171
Query: 75 LGRIL--RS------CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+L RS C +PN +T++ LI GLC +R+ +A L ++ GC P+V TY
Sbjct: 172 FQEMLDRRSHDMDDRC-SPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYT 230
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDE 174
L++GL + A + EM + + V A L M
Sbjct: 231 ILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCR 290
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
P+VVTY ++I G C +A +L +M+D+G P+++ +N++++ LCK ++DE+
Sbjct: 291 GCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDES 350
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
LL + G++P+ Y++++ G C + R++ A L + ++S GC V YS LI+G
Sbjct: 351 IALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDG 410
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
CK +++ A LY M G DVV Y+TL L + +V+ A L M R G
Sbjct: 411 LCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPS 470
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
T TY + I GLC +++ EA+EL + C YN LI G+
Sbjct: 471 TMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGM 516
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 126/398 (31%), Positives = 191/398 (47%), Gaps = 28/398 (7%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P V ++ IL L K + + + G P+L TYN L++ C+ R
Sbjct: 217 MKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARR 276
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
VS ++ + TPN VT+ +LI GLC R+ +A A+ + G P++ YN
Sbjct: 277 VSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNM 336
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
LINGL + ++ L SG I PDVVTY+SVI
Sbjct: 337 LINGLCKADQVDESIALLRRAVSG-----------------------GIKPDVVTYSSVI 373
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
G C +N +EA LL+ + +G P+V+ ++ ++D LCK GK+DEA L ++M G
Sbjct: 374 YGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCD 433
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
+ Y+TL+DG C GRV+ A L M MG + +Y+ LI G C ++ A+ L
Sbjct: 434 ADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIEL 493
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA-----DTWTYRTFI 362
EM P V YN L + + +V+ A L ++ + VAA DT Y + I
Sbjct: 494 VEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLI 553
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
DGLCK + EA++ F+ + D Y+ L++GL
Sbjct: 554 DGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGL 591
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 146/290 (50%), Gaps = 30/290 (10%)
Query: 118 CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENIN 177
C+P+V+TY L+ G R G +D+A+ F +M+ +N+
Sbjct: 5 CQPDVYTYAALLRGFCRGGE-----------------------IDQAQRCFDEMRSKNLV 41
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P+V + +I G C A +A M G+ + V + ++ L K ++D+A +
Sbjct: 42 PNVFLCSILIDGLCKAKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAI 101
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
L M G PN YN+L+DG C +RA+ELF M+S+ C+ ++ +Y+ L++G +
Sbjct: 102 LHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFR 161
Query: 298 NKEIEGALSLYGEMLSK-------GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
++E A++L+ EML + P+V+ Y+ L L + ++V +A +L + M+ G
Sbjct: 162 TGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARG 221
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ D TY +DGLCK S + A E+ R + C ++ YN L+ GL
Sbjct: 222 CSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGL 271
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 115/238 (48%), Gaps = 19/238 (7%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP V ++ L L K D L++ + G D+ TY+ LI+ CK GRV
Sbjct: 395 RGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDE 454
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
++L R++R P+ +T+ SLIKGLC + + EA L ++ C P+ TYN LI+
Sbjct: 455 AHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIH 514
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
G+ R A+ L E+ + G D + Y+S+I G
Sbjct: 515 GMCRMERVDSAVVLLEQAKARCVAAGGTAL------------------DTIAYSSLIDGL 556
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL-LDLMIQIGVR 247
C A EA EM+D GV P+ +T++++++ L K+ + E L LD M+Q+G R
Sbjct: 557 CKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLGYR 614
>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 500
Score = 227 bits (579), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 128/386 (33%), Positives = 200/386 (51%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + F+ L +AK Y+ V+SLF+ L G+ DLY++ LI+CFC+ R+S
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
LG++++ F P+ VTF SL+ G C +R EA +L ++ G EPNV YNT+I+ L
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G AL++ + MK I PDVVTY S+I ++
Sbjct: 197 KGQVNTALDVLK-----------------------HMKKMGIRPDVVTYNSLITRLFHSG 233
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
W + +L +MM G+ P+V+TF+ ++D K G++ EA + + MIQ V PN YN
Sbjct: 234 TWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYN 293
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L++G C+ G ++ AK++ + S G +Y+ LINGYCK K ++ + + M
Sbjct: 294 SLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRD 353
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+ D YNTL+ + + A K+ M GV D +T+ +DGLC + I +A
Sbjct: 354 GVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKA 413
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ L+ K + I YN +I GL
Sbjct: 414 LVRLEDLQKSKTVVGIITYNIIIKGL 439
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 112/239 (46%)
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
+ A LF M + + P +V ++ ++ N + L + G+ ++ +F +
Sbjct: 61 NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
+D C+ ++ A L M+++G P+ + +L++GFC R A L + +G
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
V Y+ +I+ C+ ++ AL + M GI+PDVV YN+L LF + +
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +M R G++ D T+ ID K ++EA + + + +I YN LI+GL
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL 299
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 103/216 (47%)
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +R ++ +N+A L +M + P++V F+ ++ + K K + L +
Sbjct: 47 YRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE 106
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+G+ + + + TL+D FC R++ A M +G ++ ++ L+NG+C
Sbjct: 107 MLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFY 166
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+SL +++ G +P+VVIYNT+ L E QV A + M++ G+ D TY + I
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
L + + + + + D+ ++ LID
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALID 262
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 69/135 (51%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N L+ + + + R+ S G+ PD+YT+NIL++ C G++ V L +
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDL 420
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+S +T+ +IKGLC ++ +A LF L + G P+V TY T++ GL R
Sbjct: 421 QKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLW 480
Query: 139 IVALNLFEEMASGNG 153
A L+ +M +G
Sbjct: 481 REAHELYRKMQKEDG 495
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 227 bits (579), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 132/422 (31%), Positives = 212/422 (50%), Gaps = 55/422 (13%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP V ++ + L K + +D +F+++ G+ P+ TYN LI+ + +G+
Sbjct: 201 RSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKE 260
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESR---------------------------- 102
+L ++ P+ T+ SL+ LCA S
Sbjct: 261 VVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYA 320
Query: 103 ----IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE 158
I +A +F K+R G PNV Y LI+ L + G
Sbjct: 321 KCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGR--------------------- 359
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
VD A+ F QM +E + P++V + S++ G C + W A+ L+ EM+DQG+ PN V F
Sbjct: 360 --VDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFF 417
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
N ++ LC G++ E RL+DLM +GVRP+AF Y L+ G+CL GR + A+++F M S
Sbjct: 418 NTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVS 477
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
+G + T +Y+ L++GYC I+ A L+ EML KG+ P VV YNT+ LF+ +
Sbjct: 478 IGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSE 537
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A +L+ M G D +TY ++GLCK++ + EA ++F++L +L+I + +I
Sbjct: 538 AKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIG 597
Query: 399 GL 400
L
Sbjct: 598 AL 599
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 175/362 (48%), Gaps = 23/362 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FNI F AK D + +F ++ GL P++ Y LI+ CK+GRV V +++
Sbjct: 312 FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMI 371
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
TPN V F SL+ GLC + A L ++ G PN +NTLI L G +
Sbjct: 372 NEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVM 431
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
+ + L M+ + PD +YT +I G+C A +EA
Sbjct: 432 -----------------------EGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEA 468
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
+ + M+ G+ P VT+N ++ C ++D+A L M++ GV P YNT++ G
Sbjct: 469 EKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHG 528
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
T R + AKEL+++M + G +++Y+I++NG CK+ ++ A ++ + SKG++ +
Sbjct: 529 LFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLN 588
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
++ + + L + + E A LF + +G+ + TYR + L + + E LF
Sbjct: 589 IITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFS 648
Query: 380 TL 381
+
Sbjct: 649 AM 650
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 186/400 (46%), Gaps = 56/400 (14%)
Query: 36 VLSLFKRLN---STGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTS 92
V+SLF R+ S + P+ TY+ILI C C+MGR+ H F G IL++ + N +
Sbjct: 79 VVSLFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQ 138
Query: 93 LIKGLCAESRIMEAA-ALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG 151
L+KGLC R+ EA L ++ GC P+ +Y+ L+ G AL L MA+
Sbjct: 139 LLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMAND 198
Query: 152 NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
+G + P+VVTYT+VI G C A ++ A+ + +M+D GV
Sbjct: 199 HGR--------------------SCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGV 238
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRL--------------------------------LD 239
+PN T+N ++ GK E ++ LD
Sbjct: 239 KPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLD 298
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
LM++ G+ P+ ++N + G +++A ++F M G + V +Y LI+ CK
Sbjct: 299 LMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLG 358
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++ A + +M+++G+ P++V++N+L L + + ERA +L EM G+ + +
Sbjct: 359 RVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFN 418
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
T I LC ++E L + + D +Y LI G
Sbjct: 419 TLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISG 458
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 132/281 (46%), Gaps = 12/281 (4%)
Query: 39 LFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 98
L + G+ PD ++Y LI+ +C GR V ++ +P VT+ +L+ G C
Sbjct: 436 LIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYC 495
Query: 99 AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE 158
+ SRI +A LF ++ G P V TYNT+++GL++T A L+ M + + +
Sbjct: 496 SASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIY 555
Query: 159 GF------------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
+ VD+A ++F + + + +++T+T +I +A L +
Sbjct: 556 TYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAI 615
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
G+ PNVVT+ ++ + L + G ++E L M + G PN+ + N L+ G +
Sbjct: 616 PANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDI 675
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
+RA ++ + + S+LI+ + ++ A SL
Sbjct: 676 SRAGAYLSKLDERNFSVEASTTSLLISIFTSDEYQHHAKSL 716
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 4/194 (2%)
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
V PN T+++++ LC+ G++ + L+++ G R N V N L+ G C RV A
Sbjct: 94 VAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAM 153
Query: 271 ELFVS-MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS---KGIKPDVVIYNTL 326
++ + M +GCT SYSIL+ G+C E AL L M + + P+VV Y T+
Sbjct: 154 DVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTV 213
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
L + +RA +F +M +GV + TY I G E V++ +
Sbjct: 214 IDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGL 273
Query: 387 ELDIRAYNCLIDGL 400
+ D Y L++ L
Sbjct: 274 KPDCYTYGSLLNYL 287
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 227 bits (579), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 137/438 (31%), Positives = 218/438 (49%), Gaps = 49/438 (11%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP + +++ + L K + + +++ + G+ PD +TYN LI + G+
Sbjct: 252 RGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKE 311
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
V + R P+ VT L+ LC +I EA +F + + G P+VF+Y ++N
Sbjct: 312 AVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLN 371
Query: 131 GLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENIN 177
G G + +LF+ M G+G + G +DKA +F +M+D +
Sbjct: 372 GYATKGCLVDMTDLFDLML-GDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVK 430
Query: 178 PDVVTYTSVI-----------------------------------RGFCYANDWNEAKCL 202
PDVVTYT+VI +GFC +AK L
Sbjct: 431 PDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL 490
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
++E+M+ G++ ++V F+ I++ LCK G++ +A + DL + +G P+A VY+ LMDG+CL
Sbjct: 491 ILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCL 550
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G++ +A +F +M S G V Y L+NGYCK I+ LSL+ EML KGIKP ++
Sbjct: 551 VGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 610
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
YN + LF + A F EM G+A + TY + G KN EA+ LF+ LR
Sbjct: 611 YNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELR 670
Query: 383 ILKCELDIRAYNCLIDGL 400
+ ++DI N +I G+
Sbjct: 671 AMNVKIDIITLNTMIAGM 688
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 183/384 (47%), Gaps = 20/384 (5%)
Query: 36 VLSLFKRLNSTG-----LFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTF 90
++LF R S L P +TY IL++C + R G++LR+ + +
Sbjct: 94 AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIA 153
Query: 91 TSLIKGLCAESRIMEA-AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
L+KG C R EA L + GC P+VF+Y+ L+ L G + A +L MA
Sbjct: 154 NHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA 213
Query: 150 SGNGE--------------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
G F EG V+KA +LF +M I PD+VTY+SV+ C A
Sbjct: 214 EGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARA 273
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
+A+ L +M+++GV P+ T+N ++ G+ EA R+ M + + P+ N
Sbjct: 274 MGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNM 333
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
LM C G++ A+++F +M G VFSY I++NGY + L+ ML G
Sbjct: 334 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDG 393
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
I PD+ ++ L +++A +F+EM+ GV D TY T I LC+ + +A+
Sbjct: 394 IAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAM 453
Query: 376 ELFRTLRILKCELDIRAYNCLIDG 399
E F + D AY+CLI G
Sbjct: 454 EKFNQMIDQGVAPDKYAYHCLIQG 477
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 193/401 (48%), Gaps = 15/401 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF-V 73
P ++ IL C + + L+ F +L TGL D+ N L+ FC+ R +
Sbjct: 113 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 172
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG--CEPNVFTYNTLING 131
+L R P+ +++ L+K LC + + +A L + G C P+V Y T+I+
Sbjct: 173 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDC 232
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPD 179
++ G A +LF+EM + + + KA+ QM ++ + PD
Sbjct: 233 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPD 292
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
TY ++I G+ W EA + EM + P+VVT N++M LCK GK+ EA + D
Sbjct: 293 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFD 352
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M G P+ F Y +++G+ G + +LF M G ++++S+LI Y
Sbjct: 353 TMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCG 412
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++ A+ ++ EM G+KPDVV Y T+ L I +++ A + F++M GVA D + Y
Sbjct: 413 MLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 472
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I G C + +++A EL + LDI ++ +I+ L
Sbjct: 473 CLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNL 513
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 175/361 (48%), Gaps = 13/361 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M M+ P V S+ I+ A + LF + G+ PD+YT+++LI +
Sbjct: 350 VFDTM-AMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAY 408
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
G + ++ + P+ VT+T++I LC ++ +A F ++ G P+
Sbjct: 409 ANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 468
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQ 170
+ Y+ LI G G + A L E+ + + G + A+ +F
Sbjct: 469 YAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDL 528
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ +PD V Y+ ++ G+C +A + M+ G++PNVV + +++ CK G+
Sbjct: 529 TVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGR 588
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+DE L M+Q G++P+ +YN ++DG + GR AK F M G +Y+I
Sbjct: 589 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNI 648
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
++ G+ KN+ + A+ L+ E+ + +K D++ NT+ +F+ +VE A LF + R G
Sbjct: 649 VLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSG 708
Query: 351 V 351
+
Sbjct: 709 L 709
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 12/192 (6%)
Query: 38 SLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 97
++F + G PD Y++L++ +C +G++ V ++ + PN V + +L+ G
Sbjct: 524 NIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGY 583
Query: 98 CAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG- 156
C RI E +LF ++ G +P+ YN +I+GL+ G T+ A F EM
Sbjct: 584 CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINK 643
Query: 157 ------VEGFV-----DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
+ GF D+A LF +++ N+ D++T ++I G EAK L
Sbjct: 644 CTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFAS 703
Query: 206 MMDQGVQPNVVT 217
+ G+ P VVT
Sbjct: 704 ISRSGLVPCVVT 715
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 227 bits (578), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 128/381 (33%), Positives = 202/381 (53%), Gaps = 17/381 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ +L P+PP FN + G L K+KHY TVLSL +++ G+ P+L+ NILI CF
Sbjct: 73 LFNRLLRQNPTPPAF-EFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNILIYCF 131
Query: 63 CKMG----RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC 118
C++G ++ F+ +++ F + V++ +LI GLC A L ++
Sbjct: 132 CQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLV 191
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKE 166
+ N YNT+I G+ + H A +L+ EM S F V G + A +
Sbjct: 192 QLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAID 251
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
LF ++ ENI PD T+ ++ GFC E K + MM QG+ P+VVT+N +MD C
Sbjct: 252 LFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYC 311
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
+++ A + + M Q GV P+ YN L++GFC +V++A LF M V
Sbjct: 312 LVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVV 371
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+Y+ LI+G K+ I AL L +M +G+ P+++ YN++ LF+ HQV++A L +
Sbjct: 372 TYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKF 431
Query: 347 QRDGVAADTWTYRTFIDGLCK 367
+ G+ +TY IDGLCK
Sbjct: 432 KDQGIQPSMYTYTILIDGLCK 452
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 125/289 (43%), Gaps = 49/289 (16%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L K +T S+F + G+ PD+ +YNILIN FCK+ +V +
Sbjct: 298 PDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNL 357
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ PN VT+ SLI GL RI A L ++ G PN+ TYN++I+ L++
Sbjct: 358 FNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFK 417
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYT---------- 184
T VDKA L + KD+ I P + TYT
Sbjct: 418 THQ-----------------------VDKAIALITKFKDQGIQPSMYTYTILIDGLCKVE 454
Query: 185 ----------SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
+I GFC ++EA LL +M D PN VT+ + + L N + D+A
Sbjct: 455 GYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKA 514
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
+L MI G+ + Y C + +++++ + C+H
Sbjct: 515 EKLFREMITRGLLNRSASYP------CSSMKIHQSLTMVQHTWCDSCSH 557
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 123/259 (47%), Gaps = 4/259 (1%)
Query: 145 FEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
F +S + F VD A LF ++ +N P + ++ + ++ L
Sbjct: 51 FISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQ 110
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNG----KMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
+M +G++PN+ N+++ C+ G ++ +A D ++ +G + Y TL+ G
Sbjct: 111 KMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGL 170
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
C G A +L ++ Y+ +I G CK+K + A LY EM+SKGI P+V
Sbjct: 171 CKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNV 230
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
V Y+ L F + +++ A LF+++ + + D +T+ +DG CK+ + E +F
Sbjct: 231 VTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAM 290
Query: 381 LRILKCELDIRAYNCLIDG 399
+ D+ YN L+DG
Sbjct: 291 MMKQGIIPDVVTYNSLMDG 309
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 62/140 (44%), Gaps = 15/140 (10%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP + ++N + L K D ++L + G+ P +YTY ILI+ CK+
Sbjct: 399 RGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKV----E 454
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
G+ + T N T+ +I G C + EA +L +K++ C PN TY I
Sbjct: 455 GYDI---------TVN--TYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIR 503
Query: 131 GLYRTGHTIVALNLFEEMAS 150
L A LF EM +
Sbjct: 504 SLLDNNENDKAEKLFREMIT 523
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 88/225 (39%), Gaps = 39/225 (17%)
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
N ++++ N +D+A L + +++ P AF +N ++ + + L
Sbjct: 50 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLS 109
Query: 274 VSMESMGCTHTVFSYSIL---------------------------------------ING 294
ME G +F+ +IL I+G
Sbjct: 110 QKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHG 169
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
CK E AL L + K ++ + V+YNT+ + + V AF L+ EM G++ +
Sbjct: 170 LCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPN 229
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
TY I G + +A++LF + + + D +N L+DG
Sbjct: 230 VVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDG 274
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 227 bits (578), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 125/383 (32%), Positives = 192/383 (50%), Gaps = 24/383 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGR 77
S N++ K + L+ + + N G FPD YT+N L+N CK G V H ++
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
+L+ + P+ T+ S+I GLC + EA + ++ C PN TYNTLI+ L +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCK--- 377
Query: 138 TIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
E V++A EL + + I PDV T+ S+I+G C +
Sbjct: 378 --------------------ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
A L EM +G +P+ T+N+++D LC GK+DEA +L M G + YNTL+
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
DGFC + A+E+F ME G + +Y+ LI+G CK++ +E A L +M+ +G K
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK 537
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
PD YN+L +++A + M +G D TY T I GLCK + A +L
Sbjct: 538 PDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Query: 378 FRTLRILKCELDIRAYNCLIDGL 400
R++++ L AYN +I GL
Sbjct: 598 LRSIQMKGINLTPHAYNPVIQGL 620
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 131/381 (34%), Positives = 196/381 (51%), Gaps = 14/381 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FN L L K H + + + G PD+YTYN +I+ CK+G V V
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ +PN VT+ +LI LC E+++ EA L L G P+V T+N+LI GL
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
T + VA+ LFEEM S E +G +D+A + QM+ V+T
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I GFC AN EA+ + EM GV N VT+N ++D LCK+ ++++A++L+D MI
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G +P+ + YN+L+ FC G + +A ++ +M S GC + +Y LI+G CK +E
Sbjct: 533 MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM-QRDGVAADTWTYRTF 361
A L + KGI YN + LF + A LF EM +++ D +YR
Sbjct: 593 VASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIV 652
Query: 362 IDGLCK-NSYIVEAVELFRTL 381
GLC I EAV+ L
Sbjct: 653 FRGLCNGGGPIREAVDFLVEL 673
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 206/410 (50%), Gaps = 13/410 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ D+M++ P +N + L V +++ G+ PD+ T+N+LI
Sbjct: 138 LSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIK 197
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C+ ++ ++L + P+ TFT++++G E + A + ++ FGC
Sbjct: 198 ALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSW 257
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE-------------GFVDKAKEL 167
+ + N +++G + G ALN +EM++ +G F + G V A E+
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEI 317
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
M E +PDV TY SVI G C + EA +L +M+ + PN VT+N ++ LCK
Sbjct: 318 MDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCK 377
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
+++EA+ L ++ G+ P+ +N+L+ G CLT A ELF M S GC F+
Sbjct: 378 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT 437
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y++LI+ C +++ AL++ +M G V+ YNTL + ++ A ++FDEM+
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
GV+ ++ TY T IDGLCK+ + +A +L + + + D YN L+
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 157/338 (46%), Gaps = 23/338 (6%)
Query: 84 TPNAVTFTS----LIKGLCAESRIMEAAALF---TKLRVFGCEPNVFTYNTLINGLYRTG 136
+P++ +S L+ L ++ A LF +K F EP + Y ++ L R+G
Sbjct: 40 SPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPAL--YEEILLRLGRSG 97
Query: 137 HTIVALNLFEEMASGNGEFGVEGF---VDKAKELFLQ---------MKDE-NINPDVVTY 183
+ E+M S E G F ++ + LQ M DE + PD Y
Sbjct: 98 SFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFY 157
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
++ N + +M G++P+V TFNV++ LC+ ++ A +L+ M
Sbjct: 158 NRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPS 217
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G+ P+ + T+M G+ G ++ A + M GC+ + S +++++G+CK +E
Sbjct: 218 YGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVED 277
Query: 304 ALSLYGEMLSK-GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL+ EM ++ G PD +NTL L + V+ A ++ D M ++G D +TY + I
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GLCK + EAVE+ + C + YN LI L
Sbjct: 338 SGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTL 375
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 90/242 (37%), Gaps = 59/242 (24%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M+ M P ++N L + + + + S G PD+ TY LI+
Sbjct: 527 LMDQMI-MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGL 585
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK GRV V ++LRS +++ G
Sbjct: 586 CKAGRVE----VASKLLRS-------------------------------IQMKGINLTP 610
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
YN +I GL+R T A+NLF EM N PD V+
Sbjct: 611 HAYNPVIQGLFRKRKTTEAINLFREMLEQN----------------------EAPPDAVS 648
Query: 183 YTSVIRGFCY-ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y V RG C EA L+E++++G P + ++ + L + +L++++
Sbjct: 649 YRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMV 708
Query: 242 IQ 243
+Q
Sbjct: 709 MQ 710
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 227 bits (578), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 125/383 (32%), Positives = 192/383 (50%), Gaps = 24/383 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGR 77
S N++ K + L+ + + N G FPD YT+N L+N CK G V H ++
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
+L+ + P+ T+ S+I GLC + EA ++ C PN TYNTLI+ L +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCK--- 377
Query: 138 TIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
E V++A EL + + I PDV T+ S+I+G C +
Sbjct: 378 --------------------ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
A L EM +G +P+ T+N+++D LC GK+DEA +L M G + YNTL+
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
DGFC ++ A+E+F ME G + +Y+ LI+G CK++ +E A L +M+ +G K
Sbjct: 478 DGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQK 537
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
PD YN+L +++A + M +G D TY T I GLCK + A +L
Sbjct: 538 PDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Query: 378 FRTLRILKCELDIRAYNCLIDGL 400
R++++ L AYN +I GL
Sbjct: 598 LRSIQMKGIALTPHAYNPVIQGL 620
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/381 (34%), Positives = 196/381 (51%), Gaps = 14/381 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FN L L K H + + + G PD+YTYN +I+ CK+G V
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEF 352
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ +PN VT+ +LI LC E+++ EA L L G P+V T+N+LI GL
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
T + VA+ LFEEM S E +G +D+A + QM+ V+T
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I GFC AN EA+ + EM GV N VT+N ++D LCK+ ++++AS+L+D MI
Sbjct: 473 YNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMI 532
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G +P+ F YN+L+ FC G + +A ++ +M S GC + +Y LI+G CK +E
Sbjct: 533 MEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM-QRDGVAADTWTYRTF 361
A L + KGI YN + LF + A LF EM +++ A D +YR
Sbjct: 593 VASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIV 652
Query: 362 IDGLCK-NSYIVEAVELFRTL 381
GLC I EAV+ L
Sbjct: 653 FRGLCNGGGPIREAVDFLVEL 673
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 201/396 (50%), Gaps = 13/396 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +N + L + V +++ G+ PD+ T+N+LI C+ ++ ++
Sbjct: 152 PDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILM 211
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P+ TFT++++G E + A + ++ FGC + + N +++G +
Sbjct: 212 LEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCK 271
Query: 135 TGHTIVALNLFEEMASGNGEFGVE-------------GFVDKAKELFLQMKDENINPDVV 181
G ALN +EM++ +G F + G V A E+ M E +PDV
Sbjct: 272 EGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVY 331
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY SVI G C + EA L +M+ + PN VT+N ++ LCK +++EA+ L ++
Sbjct: 332 TYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
G+ P+ +N+L+ G CLT A ELF M S GC F+Y++LI+ C ++
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ AL++ +M G V+ YNTL + +++ A ++FDEM+ GV+ ++ TY T
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
IDGLCK+ + +A +L + + + D YN L+
Sbjct: 512 IDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLL 547
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 153/325 (47%), Gaps = 25/325 (7%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
D M+ R P ++N L L K + L + L S G+ PD+ T+N LI C
Sbjct: 353 LDQMIT-RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ + P+ T+ LI LC++ ++ EA + ++ + GC +V
Sbjct: 412 LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI 471
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
TYNTLI+G + + +A+E+F +M+ ++ + VTY
Sbjct: 472 TYNTLIDGFCKANK-----------------------IREAEEIFDEMEVHGVSRNSVTY 508
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
++I G C + +A L+ +M+ +G +P+ T+N ++ C+ G + +A+ ++ M
Sbjct: 509 NTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTS 568
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G P+ Y TL+ G C GRV A +L S++ G T +Y+ +I G + ++
Sbjct: 569 NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTE 628
Query: 304 ALSLYGEMLSKG-IKPDVVIYNTLF 327
A++L+ EML + PD V Y +F
Sbjct: 629 AINLFREMLEQNEAAPDAVSYRIVF 653
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 157/338 (46%), Gaps = 23/338 (6%)
Query: 84 TPNAVTFTS----LIKGLCAESRIMEAAALF---TKLRVFGCEPNVFTYNTLINGLYRTG 136
+PN+ +S L+ L +++ A LF +K F EP + Y ++ L R+G
Sbjct: 40 SPNSAALSSSDVKLLDSLRSQADDSAALRLFNLASKKPNFSPEPAL--YEEILLRLGRSG 97
Query: 137 HTIVALNLFEEMASGNGEFGVEGF---VDKAKELFLQ----------MKDENINPDVVTY 183
+ E+M + E G F ++ + LQ + D + PD Y
Sbjct: 98 SFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFY 157
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
++ N+ + +M G++P+V TFNV++ LC+ ++ A +L+ M
Sbjct: 158 NRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPS 217
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G+ P+ + T+M G+ G ++ A + M GC+ + S +++++G+CK +E
Sbjct: 218 YGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVED 277
Query: 304 ALSLYGEMLSK-GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL+ EM ++ G PD +NTL L + V+ A ++ D M ++G D +TY + I
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GLCK + EAVE + C + YN LI L
Sbjct: 338 SGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTL 375
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 91/242 (37%), Gaps = 59/242 (24%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M+ M P ++N L + + + + S G PD+ TY LI+
Sbjct: 527 LMDQMI-MEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGL 585
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK GRV V ++LRS +++ P+
Sbjct: 586 CKAGRVE----VASKLLRS-----------------------------IQMKGIALTPHA 612
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+ N +I GL+R T A+NLF EM N PD V+
Sbjct: 613 Y--NPVIQGLFRKRKTTEAINLFREMLEQN----------------------EAAPDAVS 648
Query: 183 YTSVIRGFCY-ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y V RG C EA L+E++++G P + ++ + L + +L++++
Sbjct: 649 YRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMV 708
Query: 242 IQ 243
+Q
Sbjct: 709 MQ 710
>gi|356561776|ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 567
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 144/408 (35%), Positives = 217/408 (53%), Gaps = 35/408 (8%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGL-FPDLYTYNILINCF 62
F ML + P P + FN+LFG +AK++H+ T +SL K L+S G D+ T NILINC
Sbjct: 64 FHRMLTLNPFPC-IQDFNLLFGIVAKSQHFATAISLIKTLHSLGYEIADVCTLNILINCL 122
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAES---RIMEAAALFTKLRVF--- 116
C++ + + GF VLG + + P VT ++ GLC + +I + + L+
Sbjct: 123 CRLRKTTLGFAVLGLMTKIGLEPTLVTLNTIANGLCIVNGLCKIGDTSGALESLKKMVKR 182
Query: 117 GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI 176
EPNV YN +++GL + G AL LF EM G V N+
Sbjct: 183 NLEPNVVVYNAILDGLCKRGLVGEALGLFYEM----------GVV-------------NV 219
Query: 177 NPDVVTYTSVIRGFC-YANDWNEAKCLLIEMM-DQGVQPNVVTFNVIMDELCKNGKMDEA 234
P+VVTY +I+G C W E L EM+ ++G+ P+V TF+++++ CK G + A
Sbjct: 220 EPNVVTYNCLIQGLCGEVGGWREGVGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRA 279
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM--ESMGCTHTVFSYSILI 292
++ MI+IGV N YN+L+ G+CL R+ A +F M E GC +V +Y+ LI
Sbjct: 280 ESMVGFMIRIGVELNVVTYNSLISGYCLRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLI 339
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
+G+CK K++ A+SL EM+ KG+ PDV + +L FE+ + A +LF M+ G
Sbjct: 340 HGWCKVKKVNKAMSLLSEMVGKGLDPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQV 399
Query: 353 ADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
T +DGL K EA+ LFR + +LDI YN ++DG+
Sbjct: 400 PILQTCAVVLDGLYKCWLDSEAMTLFRAMEKSGLDLDIVIYNIMLDGM 447
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 166/358 (46%), Gaps = 27/358 (7%)
Query: 15 PPVCSFNILF-GCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINCFCKMGRVSHGF 72
P V ++N L G + + + LF + G+ PD+ T++IL+N FCK G +
Sbjct: 221 PNVVTYNCLIQGLCGEVGGWREGVGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAE 280
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGCEPNVFTYNTLIN 130
++G ++R N VT+ SLI G C +R+ EA +F + GC P+V TYN+LI+
Sbjct: 281 SMVGFMIRIGVELNVVTYNSLISGYCLRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIH 340
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
G + V+KA L +M + ++PDV T+TS+I GF
Sbjct: 341 GWCKVKK-----------------------VNKAMSLLSEMVGKGLDPDVFTWTSLIGGF 377
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
AK L I M DQG P + T V++D L K EA L M + G+ +
Sbjct: 378 FEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTLFRAMEKSGLDLDI 437
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
+YN ++DG C G++N A++L + G ++++I+I G C+ ++ A L +
Sbjct: 438 VIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNIMIKGLCREGLLDDAEELLRK 497
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
M G P+ YN L + + R+ K M+ G D T I L N
Sbjct: 498 MKENGCPPNKCSYNVFVQGLLRKYDISRSRKYLQIMKDKGFPVDATTAELLIRFLSAN 555
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 190/382 (49%), Gaps = 23/382 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+ N+L K D LS + S G PD +TYN L+N CK+G H V+ +
Sbjct: 275 TVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAM 334
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
L P+ T+ SLI GLC I EA + ++ C PN TYN +I+ L +
Sbjct: 335 LLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCK---- 390
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
E VD+A E+ + + I PDV T+ S+I+G C +++
Sbjct: 391 -------------------ENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKS 431
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A L EM +G +P+ T+N+++D LC + K++EA LL M G N +YNTL+D
Sbjct: 432 AMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLID 491
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
GFC R+ A+E+F ME G + +Y+ LI+G CK+K +E A L +M+ +G++P
Sbjct: 492 GFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRP 551
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
D YN+L + +++A + M G D TY T I GLCK + A L
Sbjct: 552 DKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLL 611
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
R++++ L AYN +I L
Sbjct: 612 RSIQMKGMVLTPHAYNPVIQAL 633
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 120/381 (31%), Positives = 194/381 (50%), Gaps = 23/381 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +FNIL L K + + + + S GL PD T+ ++ + + G + +
Sbjct: 203 VSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKE 262
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+++ VT LI G C + RI +A + + G P+ FTYNTL+NGL + G
Sbjct: 263 QMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIG 322
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
H A+ + + M G ++PD+ TY S+I G C +
Sbjct: 323 HAKHAMEVVDAMLLGG-----------------------LDPDIYTYNSLISGLCKLGEI 359
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
EA +L +M+ + PN VT+N I+ LCK ++DEA+ + L+ G+ P+ +N+L
Sbjct: 360 EEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSL 419
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ G CL+ A +LF M+ GC F+Y++LI+ C ++++E AL+L EM G
Sbjct: 420 IQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGC 479
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+VVIYNTL + ++E A ++FDEM+ GV+ D+ TY T IDGLCK+ + +A +
Sbjct: 480 ARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQ 539
Query: 377 LFRTLRILKCELDIRAYNCLI 397
L + + D YN L+
Sbjct: 540 LMDQMIMEGLRPDKFTYNSLL 560
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 128/376 (34%), Positives = 201/376 (53%), Gaps = 15/376 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L L K H + + + GL PD+YTYN LI+ CK+G + +
Sbjct: 306 PDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKI 365
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ +PNAVT+ ++I LC E+R+ EA + L G P+V T+N+LI GL
Sbjct: 366 LDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCL 425
Query: 135 TGHTIVALNLFEEMASGNG----EFGVEGFVD------KAKELFLQMKDENIN---PDVV 181
+ + A++LFEEM G G EF +D K +E +K+ +N +VV
Sbjct: 426 SSNHKSAMDLFEEM-KGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVV 484
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y ++I GFC EA+ + EM QGV + VT+N ++D LCK+ ++++A++L+D M
Sbjct: 485 IYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQM 544
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
I G+RP+ F YN+L+ FC TG + +A ++ +M S GC + +Y+ LI+G CK +
Sbjct: 545 IMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRV 604
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A L + KG+ YN + LF+ ++ A +LF EM D TY+
Sbjct: 605 QVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIV 664
Query: 362 IDGLCK-NSYIVEAVE 376
GLC I EAV+
Sbjct: 665 YRGLCNGGGPIGEAVD 680
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 176/381 (46%), Gaps = 24/381 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
F I K + YD V+ + K + + + PD YN+L+N ++ +
Sbjct: 135 FLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSM 194
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+R + TF LIK LC ++ A + ++ +G P+ T+ T++ G G+
Sbjct: 195 VRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNL 254
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
AL + E+M E+G VT +I GFC ++
Sbjct: 255 DGALRIKEQMV----EYGCPC-------------------TDVTVNVLINGFCKQGRIDQ 291
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A + E + +G +P+ T+N +++ LCK G A ++D M+ G+ P+ + YN+L+
Sbjct: 292 ALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLIS 351
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G C G + A ++ M S C+ +Y+ +I+ CK ++ A + + SKGI P
Sbjct: 352 GLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILP 411
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
DV +N+L L + A LF+EM+ G D +TY ID LC + + EA+ L
Sbjct: 412 DVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLL 471
Query: 379 RTLRILKCELDIRAYNCLIDG 399
+ + + C ++ YN LIDG
Sbjct: 472 KEMELNGCARNVVIYNTLIDG 492
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 151/325 (46%), Gaps = 24/325 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
I D M++ R P ++N + L K D + + L S G+ PD+ T+N LI
Sbjct: 365 ILDQMVS-RDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGL 423
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C + + P+ T+ LI LC+ ++ EA L ++ + GC NV
Sbjct: 424 CLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNV 483
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
YNTLI+G + +++A+E+F +M+ + ++ D VT
Sbjct: 484 VIYNTLIDGFCKNKR-----------------------IEEAEEIFDEMELQGVSRDSVT 520
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G C + +A L+ +M+ +G++P+ T+N ++ CK G + +A+ ++ M
Sbjct: 521 YNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMT 580
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G P+ Y TL+ G C GRV A L S++ G T +Y+ +I K
Sbjct: 581 SSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTH 640
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLF 327
A+ L+ EML K PD + Y ++
Sbjct: 641 EAMRLFREMLDKSEPPDAITYKIVY 665
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 142/280 (50%), Gaps = 23/280 (8%)
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
+V T+N LI L + A+ + EEM S +G ++PD
Sbjct: 202 DVSTFNILIKALCKAHQVRPAILMMEEMPS----YG-------------------LSPDE 238
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
T+T++++G+ + + A + +M++ G VT NV+++ CK G++D+A +
Sbjct: 239 TTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQE 298
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+ G RP+ F YNTL++G C G A E+ +M G +++Y+ LI+G CK E
Sbjct: 299 AVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGE 358
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
IE A+ + +M+S+ P+ V YN + L + ++V+ A ++ + G+ D T+ +
Sbjct: 359 IEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNS 418
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I GLC +S A++LF ++ C D YN LID L
Sbjct: 419 LIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSL 458
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 113/230 (49%)
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M I DV T+ +I+ C A+ A ++ EM G+ P+ TF IM + G
Sbjct: 194 MVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGN 253
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+D A R+ + M++ G N L++GFC GR+++A S G F+Y+
Sbjct: 254 LDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNT 313
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L+NG CK + A+ + ML G+ PD+ YN+L L ++ ++E A K+ D+M
Sbjct: 314 LVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRD 373
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + TY I LCK + + EA E+ R L D+ +N LI GL
Sbjct: 374 CSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGL 423
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 137/294 (46%), Gaps = 13/294 (4%)
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG-------VEGF-----VDKAKEL 167
P+ Y ++ L + G + EEM EF VE + D+ +
Sbjct: 95 PSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGI 154
Query: 168 FLQMKDE-NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
M+DE I PD Y ++ AN + M+ + ++ +V TFN+++ LC
Sbjct: 155 VKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALC 214
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
K ++ A +++ M G+ P+ + T+M G+ G ++ A + M GC T
Sbjct: 215 KAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDV 274
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+ ++LING+CK I+ ALS E +S+G +PD YNTL L +I + A ++ D M
Sbjct: 275 TVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAM 334
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G+ D +TY + I GLCK I EAV++ + C + YN +I L
Sbjct: 335 LLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSL 388
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 107/240 (44%), Gaps = 13/240 (5%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +N L KNK + +F + G+ D TYN LI+ CK RV ++
Sbjct: 483 VVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMD 542
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+++ P+ T+ SL+ C I +AA + + GC P++ TY TLI+GL + G
Sbjct: 543 QMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAG 602
Query: 137 HTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYT 184
VA L + + +A LF +M D++ PD +TY
Sbjct: 603 RVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYK 662
Query: 185 SVIRGFCYAN-DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
V RG C EA +EM+++G P +F ++ + LC D +L+D++++
Sbjct: 663 IVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMIME 722
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 195/387 (50%), Gaps = 23/387 (5%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P + N+L K + VLS +++ G PD +T+N L+N C++G V H
Sbjct: 278 PSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALE 337
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L +L+ F P+ T+ SLI GLC + EA + ++ + PN TYNTLI+ L
Sbjct: 338 ILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLC 397
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ E V++A EL + + I PDV T+ S+I+G C
Sbjct: 398 K-----------------------ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLT 434
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
N+ A L EM +G P+ T+N+++D LC G+++EA LL M G N Y
Sbjct: 435 NNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTY 494
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
NTL+DGFC R+ A+E+F ME G + V +Y+ LI+G CKN+ +E A L +ML
Sbjct: 495 NTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLM 554
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+G+KPD YN+L +++A + M +G D+ TY T I GL K +
Sbjct: 555 EGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVEL 614
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A L RT+++ L + YN +I L
Sbjct: 615 ASRLLRTVQLKGMVLAPQTYNPVIKAL 641
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/383 (32%), Positives = 197/383 (51%), Gaps = 23/383 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FNIL L + + + + + S GL PD T+ L+ F + G ++ +
Sbjct: 209 PDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRI 268
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ + + VT L+ G C E RI E + ++ G P+ FT+N+L+NGL R
Sbjct: 269 REQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCR 328
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
GH AL + + M EGF +PD+ TY S+I G C
Sbjct: 329 IGHVKHALEILDVMLQ-------EGF----------------DPDIFTYNSLIFGLCKLG 365
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ EA +L +M+ + PN VT+N ++ LCK +++EA+ L ++ G+ P+ +N
Sbjct: 366 EVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 425
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L+ G CLT A ELF M++ GC F+Y++LI+ C +E ALSL EM S
Sbjct: 426 SLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESS 485
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G +VV YNTL + ++E A ++FDEM+ G++ + TY T IDGLCKN + EA
Sbjct: 486 GCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEA 545
Query: 375 VELFRTLRILKCELDIRAYNCLI 397
+L + + + D YN L+
Sbjct: 546 AQLMDQMLMEGLKPDKFTYNSLL 568
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 129/377 (34%), Positives = 194/377 (51%), Gaps = 13/377 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FN L L + H L + + G PD++TYN LI CK+G V +
Sbjct: 314 PDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEI 373
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ F+PN VT+ +LI LC E+++ EA L L G P+V T+N+LI GL
Sbjct: 374 LNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 433
Query: 135 TGHTIVALNLFEEMASGN---GEFG---------VEGFVDKAKELFLQMKDENINPDVVT 182
T + +A+ LFEEM + EF G +++A L +M+ + +VVT
Sbjct: 434 TNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVT 493
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I GFC EA+ + EM QG+ NVVT+N ++D LCKN +++EA++L+D M+
Sbjct: 494 YNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQML 553
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G++P+ F YN+L+ FC G + +A ++ +M S GC +Y LI G K +E
Sbjct: 554 MEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVE 613
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L + KG+ YN + LF + A +LF EM G D TY+
Sbjct: 614 LASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVF 673
Query: 363 DGLCK-NSYIVEAVELF 378
GLC I EAV+
Sbjct: 674 RGLCSGGGPIGEAVDFL 690
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 178/382 (46%), Gaps = 24/382 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNST-GLFPDLYTYNILINCFCKMGRVSHGFVVLGR 77
+F IL AK + +D +++ + GL D +TYN L+N ++ +V R
Sbjct: 142 TFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSR 201
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
++ P+ TF LIK LC +I A + ++ +G P+ T+ TL+ G G+
Sbjct: 202 MVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGN 261
Query: 138 TIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
AL + E+M + VT ++ G+C
Sbjct: 262 MNGALRIREQMVAAG-----------------------CPSSNVTVNVLVHGYCKEGRIE 298
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
E + EM ++G +P+ TFN +++ LC+ G + A +LD+M+Q G P+ F YN+L+
Sbjct: 299 EVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLI 358
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
G C G V A E+ M + +Y+ LI+ CK ++E A L + SKGI
Sbjct: 359 FGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 418
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
PDV +N+L L + A +LF+EM+ G D +TY ID LC + EA+ L
Sbjct: 419 PDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSL 478
Query: 378 FRTLRILKCELDIRAYNCLIDG 399
+ + C ++ YN LIDG
Sbjct: 479 LKEMESSGCSRNVVTYNTLIDG 500
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 162/358 (45%), Gaps = 24/358 (6%)
Query: 10 MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS 69
+R P ++N L L K + L + L S G+ PD+ T+N LI C
Sbjct: 379 LRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHR 438
Query: 70 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
+ + P+ T+ LI LC+ R+ EA +L ++ GC NV TYNTLI
Sbjct: 439 LAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLI 498
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRG 189
+G + +++A+E+F +M+ + I+ +VVTY ++I G
Sbjct: 499 DGFCKNKR-----------------------IEEAEEIFDEMELQGISRNVVTYNTLIDG 535
Query: 190 FCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
C EA L+ +M+ +G++P+ T+N ++ C+ G + +A+ ++ M G P+
Sbjct: 536 LCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPD 595
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
+ Y TL+ G GRV A L +++ G +Y+ +I + K A+ L+
Sbjct: 596 SVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFR 655
Query: 310 EMLSKGIKPDVVIYNTLFVVLFE-IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
EM+ KG PD V Y +F L + A EM G D ++ +GLC
Sbjct: 656 EMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLC 713
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 179/376 (47%), Gaps = 26/376 (6%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCF--T 84
L K+ + ++ + + + TG T+ ILI + K V+ I+ F
Sbjct: 115 LGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVD-IMEEEFGLK 173
Query: 85 PNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNL 144
+A T+ L+ L +++ + +++ G +P+V T+N LI L R A+ +
Sbjct: 174 LDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILM 233
Query: 145 FEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
EEM G +G ++PD T+T++++GF + N A +
Sbjct: 234 MEEM----GSYG-------------------LSPDEKTFTTLMQGFIEEGNMNGALRIRE 270
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
+M+ G + VT NV++ CK G+++E +D M G RP+ F +N+L++G C G
Sbjct: 271 QMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIG 330
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
V A E+ M G +F+Y+ LI G CK E+E A+ + +M+ + P+ V YN
Sbjct: 331 HVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYN 390
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
TL L + +QVE A +L + G+ D T+ + I GLC + A+ELF ++
Sbjct: 391 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTK 450
Query: 385 KCELDIRAYNCLIDGL 400
C D YN LID L
Sbjct: 451 GCHPDEFTYNMLIDSL 466
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 115/303 (37%), Gaps = 77/303 (25%)
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
K N P V Y V+R + + +L EM G + TF ++++ K
Sbjct: 97 KQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELF 156
Query: 232 DEASRLLDL------------------------------------MIQIGVRPNAFVYNT 255
DEA ++D+ M+ G++P+ +N
Sbjct: 157 DEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNI 216
Query: 256 LMDGFCLTGRVNRAKELFVSMESMG----------------------------------- 280
L+ C R ++ + + ME MG
Sbjct: 217 LIKALC---RAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMV 273
Query: 281 ---CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
C + + ++L++GYCK IE LS EM ++G +PD +N+L L I V+
Sbjct: 274 AAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVK 333
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
A ++ D M ++G D +TY + I GLCK + EAVE+ + + + YN LI
Sbjct: 334 HALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLI 393
Query: 398 DGL 400
L
Sbjct: 394 STL 396
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/437 (31%), Positives = 220/437 (50%), Gaps = 47/437 (10%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP V ++ + L K + +D ++F+++ G+ P++ TYN LI+ + +G+
Sbjct: 232 RGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKE 291
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+L + PN T+ SL+ LC R EA F + G +P+V TY +++
Sbjct: 292 VVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLH 351
Query: 131 GLYRTG--------------------HTIV---------------ALNLFEEM-ASGNGE 154
G G H I A+++F +M G
Sbjct: 352 GYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSP 411
Query: 155 FGVE-----------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
V G VD A+ F QM +E + PD+V ++S++ G C + W + + L
Sbjct: 412 DAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELF 471
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
EM++ G+ PN+V FN I+ LCK G++ E RL+D + +GVRP+ YNTL+DG CL
Sbjct: 472 FEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLA 531
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
G ++ A +L M S+G FSY+ L++GYCK I+ A S + +MLS GI P VV Y
Sbjct: 532 GTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTY 591
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
NT+ LF+ + A +L+ M G D +TY ++GLCK++ + EA+++F+ L
Sbjct: 592 NTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCS 651
Query: 384 LKCELDIRAYNCLIDGL 400
+L+I +N +I L
Sbjct: 652 KGLQLNIITFNIMIGAL 668
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 137/425 (32%), Positives = 212/425 (49%), Gaps = 29/425 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNK-------HYDTVLSLFKRLNST---GLFPDL 52
+FD +L P V +FN L ++++ +TV+SLF R+ + P+
Sbjct: 36 LFDELLP-HARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIKVAPNR 94
Query: 53 YTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA-ALFT 111
TY+ILI CFC+MG + HGF G IL++ + + + L+ GLC R+ EA L
Sbjct: 95 CTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQ 154
Query: 112 KLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG----------------NGEF 155
++ GC P+ +YN L+ GL AL L MA NG F
Sbjct: 155 RMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVING-F 213
Query: 156 GVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNV 215
EG VDK LFL+M D I PDVVTYT+VI G C A ++ A+ + +M+D GV+PN+
Sbjct: 214 FTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNI 273
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
T+N ++ GK E R+L+ M G +PN Y +L++ C GR A+ F S
Sbjct: 274 DTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDS 333
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
M G +V +Y I+++GY + L M++ GI P+ I+N F +
Sbjct: 334 MIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGI 393
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
+++A +F++M++ G++ D +Y ID LCK + +A F + DI ++
Sbjct: 394 IDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSS 453
Query: 396 LIDGL 400
L+ GL
Sbjct: 454 LVYGL 458
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 184/362 (50%), Gaps = 23/362 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FNI F AK D + +F ++ GL PD +Y LI+ CK+GRV V +++
Sbjct: 381 FNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMI 440
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
TP+ V F+SL+ GLC + + LF ++ G PN+ +NT++ L +
Sbjct: 441 NEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCK----- 495
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
EG V + + L ++ + PDV++Y ++I G C A +EA
Sbjct: 496 ------------------EGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEA 537
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
LL M+ G++P+ ++N ++ CK G++D A M+ G+ P YNT++ G
Sbjct: 538 SKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHG 597
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
T R + AKEL+++M + G +++Y+I++NG CK+ ++ A+ ++ + SKG++ +
Sbjct: 598 LFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLN 657
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
++ +N + L + + E A LF + +G+ + TYR ++ L + + E LF
Sbjct: 658 IITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFS 717
Query: 380 TL 381
+
Sbjct: 718 AM 719
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/473 (25%), Positives = 213/473 (45%), Gaps = 78/473 (16%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ M+N +P V ++++G +K ++ V LF + + G+ P++ +N ++ C
Sbjct: 436 FNQMINEGVTPDIVVFSSLVYGLCTVDK-WEKVEELFFEMLNVGIHPNIVFFNTILCNLC 494
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K GRV G ++ I P+ +++ +LI G C I EA+ L + G +P+ F
Sbjct: 495 KEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSF 554
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQ 170
+YNTL++G + G A + F +M S +G F + F +AKEL+L
Sbjct: 555 SYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRF-SEAKELYLN 613
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + D+ TY ++ G C +N +EA + + +G+Q N++TFN+++ L K G+
Sbjct: 614 MINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGR 673
Query: 231 MDEA-----------------------------------SRLLDLMIQIGVRPNAFVYNT 255
++A L M + G PN+ + N
Sbjct: 674 KEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNA 733
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC------------------- 296
L+ G ++RA ++ + + S+LI+ +
Sbjct: 734 LVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILN 793
Query: 297 ---------KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
K + I+ A SL+ EML KG+ PDVV YNT+ LF+ + A +L+ M
Sbjct: 794 EANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMI 853
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +TY ++GLCK++ + EA ++F++L +L+I +N +I L
Sbjct: 854 NSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGAL 906
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 107/460 (23%), Positives = 200/460 (43%), Gaps = 79/460 (17%)
Query: 15 PPVCSFNILFG--CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
P V S+N L CLA D L + + S GL PD ++YN L++ +CK GR+ +
Sbjct: 516 PDVISYNTLIDGHCLAGT--IDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAY 573
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
++L + TP VT+ +++ GL R EA L+ + G + +++TYN ++NGL
Sbjct: 574 SHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGL 633
Query: 133 YRTGHTIVALNLFEEMASGNGEFGV----------------------------------- 157
++ A+ +F+ + S + +
Sbjct: 634 CKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNV 693
Query: 158 ------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
EG +++ LF M+ P+ +++R + D + A L +
Sbjct: 694 VTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSK 753
Query: 206 MMDQGVQPNVVTFNVIM-----DE-----------------------LCKNGKMDEASRL 237
+ ++ T ++++ DE + K ++D+A L
Sbjct: 754 LDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSL 813
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
M+ G+ P+ YNT++ G TGR + AKEL++SM + +++Y+I++NG CK
Sbjct: 814 FREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCK 873
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+ ++ A ++ + SKG++ +++ +N + L + + E A LF + +G+ D T
Sbjct: 874 SNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVT 933
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
YR + L + + E LF T+ LD R N L+
Sbjct: 934 YRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALV 973
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 165/410 (40%), Gaps = 44/410 (10%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ ++NI+ L K+ D + +F+ L S GL ++ T+NI+I K GR +
Sbjct: 623 IYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFA 682
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
I + N VT+ +++ L E + E +LF+ + G PN N L+ L G
Sbjct: 683 AIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRG 742
Query: 137 HTIVALNLFEEMASGNGEFGVEGF------------------------------------ 160
A ++ N F VE
Sbjct: 743 DISRAGAYLSKLDERN--FSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSAL 800
Query: 161 ------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
+D A LF +M + + PDVVTY +++ G ++EAK L + M++ Q N
Sbjct: 801 IKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMN 860
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
+ T+N+I++ LCK+ +DEA ++ + G++ N +N ++ GR A +LF
Sbjct: 861 IYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFA 920
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
++ + G V +Y ++ + +E L+ M G D + N L L +
Sbjct: 921 AIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRG 980
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
+ RA ++ + + T I + Y A L R+L
Sbjct: 981 DISRAGAYLSKLDEKNFSLEASTTSELISLFSRGEYQHHAKSLPEKYRLL 1030
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 85/209 (40%), Gaps = 24/209 (11%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ +F ML M+ P V ++N + L + + L+ + ++ ++YTYNI++N
Sbjct: 811 YSLFREML-MKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILN 869
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK V F + + N +TF +I L R +A LF + G P
Sbjct: 870 GLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVP 929
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
+V TY +VA NL E EG +++ LFL M+ D
Sbjct: 930 DVVTYR------------LVAENLIE-----------EGSLEEFDGLFLTMEKSGTPLDS 966
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
+++R D + A L ++ ++
Sbjct: 967 RLLNALVRRLLQRGDISRAGAYLSKLDEK 995
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/438 (31%), Positives = 217/438 (49%), Gaps = 49/438 (11%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP +++ + L K + D + +++ + G+ P+ +TYN LI + G+
Sbjct: 248 RGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKE 307
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
V + R P+ VT + L+ LC +I EA +F + + G PNVF+Y ++N
Sbjct: 308 AVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLN 367
Query: 131 GLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENIN 177
G G + +LF+ M G+G + G +DKA +F +M+D +
Sbjct: 368 GYATKGCLVDMTDLFDLML-GDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 426
Query: 178 PDVVTYTSVI-----------------------------------RGFCYANDWNEAKCL 202
PDVVTY +VI +GFC +AK L
Sbjct: 427 PDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL 486
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
+ E+M+ G+ ++V F+ I++ LCK G++ +A + DL + +G+ P A VY+ LMDG+CL
Sbjct: 487 ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCL 546
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G++ +A +F +M S G Y L+NGYCK I+ LSL+ EML KGIKP ++
Sbjct: 547 VGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 606
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
YN + LFE + A F EM G+A + TY + GL KN EA+ LF+ LR
Sbjct: 607 YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELR 666
Query: 383 ILKCELDIRAYNCLIDGL 400
+ +++I N +I G+
Sbjct: 667 AMNVKINIITLNTMIAGM 684
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 185/384 (48%), Gaps = 20/384 (5%)
Query: 36 VLSLFKRLNSTG-----LFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTF 90
++LF R S L P +TY IL++C + R G++LR+ N +
Sbjct: 90 AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIA 149
Query: 91 TSLIKGLCAESRIMEA-AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
L+KG C R EA L + GC P+VF+Y+ L+ L G + A +L MA
Sbjct: 150 NHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA 209
Query: 150 SGNG--------------EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
G F EG V+KA +LF +M I PD VTY+SV+ C A
Sbjct: 210 EGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARA 269
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
++A+ L +M+++GV PN T+N ++ G+ EA R+ M + + P+ +
Sbjct: 270 MDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSM 329
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
LM C G++ A+++F +M G VFSY+I++NGY + L+ ML G
Sbjct: 330 LMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDG 389
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
I PD+ +N L +++A +F+EM+ GV D TYRT I LC+ + +A+
Sbjct: 390 IAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM 449
Query: 376 ELFRTLRILKCELDIRAYNCLIDG 399
E F + D AY+CLI G
Sbjct: 450 EKFNQMIDQGVAPDKYAYHCLIQG 473
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 196/401 (48%), Gaps = 15/401 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF-V 73
P ++ IL C + + L+ F +L TGL ++ N L+ FC+ R +
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDI 168
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG--CEPNVFTYNTLING 131
+L R P+ +++ L+K LC + + +A L + G C P+V Y+T+I+G
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDG 228
Query: 132 LYRTGHTIVALNLFEEMASGN--GEFGVEGFV----------DKAKELFLQMKDENINPD 179
++ G A +LF+EM +F V DKA+ QM ++ + P+
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
TY ++I G+ W EA + EM + P+VVT +++M LCK GK+ EA + D
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 348
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M G PN F Y +++G+ G + +LF M G ++++++LI Y
Sbjct: 349 TMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCG 408
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++ A+ ++ EM G+KPDVV Y T+ L I +++ A + F++M GVA D + Y
Sbjct: 409 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 468
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I G C + +++A EL + LDI ++ +I+ L
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 509
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 193/410 (47%), Gaps = 13/410 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M M+ P V S+ I+ A + LF + G+ PD+YT+N+LI +
Sbjct: 346 VFDTMA-MKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAY 404
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
G + ++ + P+ VT+ ++I LC ++ +A F ++ G P+
Sbjct: 405 ANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 464
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQ 170
+ Y+ LI G G + A L E+ + + G V A+ +F
Sbjct: 465 YAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDL 524
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ ++P V Y+ ++ G+C +A + M+ G++PN V + +++ CK G+
Sbjct: 525 TVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGR 584
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+DE L M+Q G++P+ +YN ++DG GR AK F M G +Y+I
Sbjct: 585 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNI 644
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
++ G KN+ + A+ L+ E+ + +K +++ NT+ +F+ +VE A LF + R G
Sbjct: 645 VLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSG 704
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ TY I L K + EA ++F +++ CE D R N ++ L
Sbjct: 705 LVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVREL 754
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 162/361 (44%), Gaps = 12/361 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L + D + F ++ G+ PD Y Y+ LI FC G + +
Sbjct: 427 PDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL 486
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ I+ + + V F+S+I LC R+M+A +F G P Y+ L++G
Sbjct: 487 ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCL 546
Query: 135 TGHTIVALNLFEEMASGNGE-----FG--VEGF-----VDKAKELFLQMKDENINPDVVT 182
G AL +F+ M S E +G V G+ +D+ LF +M + I P +
Sbjct: 547 VGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 606
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I G A AK EM + G+ N T+N+++ L KN DEA L +
Sbjct: 607 YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELR 666
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ V+ N NT++ G T RV AK+LF S+ G V +YSI+I K +E
Sbjct: 667 AMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVE 726
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A ++ M + G +PD + N + L + +++ RA ++ + + T +
Sbjct: 727 EAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLV 786
Query: 363 D 363
D
Sbjct: 787 D 787
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 174/384 (45%), Gaps = 13/384 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD ML P + +FN+L A D + +F + G+ PD+ TY +I
Sbjct: 381 LFDLMLG-DGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 439
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C++G++ +++ P+ + LI+G C +++A L +++ G ++
Sbjct: 440 CRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 499
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
++++IN L + G + A N+F+ + + + G ++KA +F
Sbjct: 500 VFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDA 559
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M I P+ V Y +++ G+C +E L EM+ +G++P+ + +N+I+D L + G+
Sbjct: 560 MVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 619
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
A M + G+ N YN ++ G + A LF + +M + + +
Sbjct: 620 TVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 679
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+I G + + +E A L+ + G+ P VV Y+ + L + VE A +F MQ G
Sbjct: 680 MIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739
Query: 351 VAADTWTYRTFIDGLCKNSYIVEA 374
D+ + L K + IV A
Sbjct: 740 CEPDSRLLNHVVRELLKKNEIVRA 763
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 103/248 (41%), Gaps = 13/248 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M++ P V + L K D LSLF+ + G+ P YNI+I+
Sbjct: 556 VFDAMVSAGIEPNDVV-YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 614
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
+ GR V + S N T+ +++GL EA LF +LR + N+
Sbjct: 615 FEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINI 674
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
T NT+I G+++T A +LF ++ EG V++A+++F
Sbjct: 675 ITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSS 734
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M++ PD V+R N+ A L ++ ++ +T +++D G
Sbjct: 735 MQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGT 794
Query: 231 MDEASRLL 238
E R L
Sbjct: 795 CREHIRFL 802
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/318 (37%), Positives = 181/318 (56%), Gaps = 23/318 (7%)
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
+ P+ T+T++I GLC + AA LF K+ GC+P+V TY+T+I+ L +
Sbjct: 6 YQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR----- 60
Query: 143 NLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
V++A ++F MK + I+P++ TY S+I+G C + W EA +
Sbjct: 61 ------------------VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAM 102
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
L EMM + PN+VTF+++++ CK G + EA +L M ++GV PN Y++LM+G+ L
Sbjct: 103 LNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSL 162
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
V A++LF M + GC VFSY+ILINGYCK K I A L+ EM+ +G+ PD+V
Sbjct: 163 QAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVS 222
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
YNTL L ++ ++ A LF M +G D TY +DG CK Y+ +A LFR ++
Sbjct: 223 YNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQ 282
Query: 383 ILKCELDIRAYNCLIDGL 400
+ ++ YN LID +
Sbjct: 283 STYLKPNMVMYNILIDAM 300
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 181/349 (51%), Gaps = 23/349 (6%)
Query: 45 STGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 104
+ G PD++TY +IN CK+G + ++ + P+ VT++++I LC + R+
Sbjct: 3 ARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVN 62
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKA 164
EA +F+ ++ G PN+FTYN+LI GL A + EM S
Sbjct: 63 EALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMS-------------- 108
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
NI P++VT++ +I FC + EA+ +L M + GV+PNVVT++ +M+
Sbjct: 109 ---------LNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNG 159
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
++ EA +L D+MI G +P+ F YN L++G+C R+ AK+LF M G T
Sbjct: 160 YSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPD 219
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
+ SY+ LI+G C+ + A L+ ML+ G PD+ Y+ L + + +AF+LF
Sbjct: 220 IVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFR 279
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
MQ + + Y ID +CK+ + EA +LF L + + +++ +
Sbjct: 280 AMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHW 328
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 170/328 (51%), Gaps = 28/328 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ + L K++ + L +F + + G+ P+++TYN LI C R +
Sbjct: 43 PDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAM 102
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ PN VTF+ LI C E + EA + + G EPNV TY++L+NG
Sbjct: 103 LNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNG--- 159
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ ++ V +A++LF M + PDV +Y +I G+C A
Sbjct: 160 --------------------YSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAK 199
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EAK L EM+ QG+ P++V++N ++D LC+ G++ EA L M+ G P+ Y+
Sbjct: 200 RIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYS 259
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DGFC G + +A LF +M+S + Y+ILI+ CK++ ++ A L+ E+ +
Sbjct: 260 ILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQ 319
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKL 342
G++P++ + LFEI + A ++
Sbjct: 320 GLQPNMKHWK-----LFEIWKRMAALRM 342
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 104/194 (53%)
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M+ +G QP+V T+ I++ LCK G+ A+ L M + G +P+ Y+T++D C R
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
VN A ++F M++ G + +F+Y+ LI G C A ++ EM+S I P++V ++
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L + + V A + M GV + TY + ++G + + EA +LF +
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180
Query: 386 CELDIRAYNCLIDG 399
C+ D+ +YN LI+G
Sbjct: 181 CKPDVFSYNILING 194
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%)
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M+++G +PDV Y T+ L +I + A LF +M G D TY T ID LCK+
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ EA+++F ++ +I YN LI GL
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGL 90
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/354 (35%), Positives = 183/354 (51%), Gaps = 23/354 (6%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G FPD YT+N+L+N K G V H V+ +LR F P+ T+ SLI GLC + EA
Sbjct: 296 GFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEA 355
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKE 166
+ ++ C PN TYNT+I+ L + E V++A +
Sbjct: 356 VKVLNQMIERDCSPNTVTYNTIISTLCK-----------------------ENQVEEATK 392
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
L L + + I PDV TY S+I+G C + + A L EM +G P+ T+N+++D LC
Sbjct: 393 LALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLC 452
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
GK+ EA LL M G N YNTL+DGFC R+ A+E+F ME G +
Sbjct: 453 FRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSV 512
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+Y+ LI+G CK++ +E A L +M+ +G++PD YN+L + +++A + M
Sbjct: 513 TYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTM 572
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
DG D TY T I GLCK + A +L RT+++ L AYN +I L
Sbjct: 573 ASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQAL 626
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 131/375 (34%), Positives = 197/375 (52%), Gaps = 13/375 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FN+L L+K H L + + G PD+YTYN LI+ CK+G V V
Sbjct: 299 PDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKV 358
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ +PN VT+ ++I LC E+++ EA L L G P+V TYN+LI GL
Sbjct: 359 LNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCL 418
Query: 135 TGHTIVALNLFEEMASGN---GEFGVEGFVD---------KAKELFLQMKDENINPDVVT 182
+ + VA+ L++EM + EF +D +A L +M+ +V+T
Sbjct: 419 SRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVIT 478
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I GFC EA+ + +M QGV N VT+N ++D LCK+ +++EAS+L+D MI
Sbjct: 479 YNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMI 538
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+RP+ F YN+L+ FC G + +A ++ +M S GC + +Y LI G CK +E
Sbjct: 539 MEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVE 598
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L + KGI YN + LF + + A +LF EM A D TY+
Sbjct: 599 AATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVF 658
Query: 363 DGLCK-NSYIVEAVE 376
GLC+ I EAV+
Sbjct: 659 RGLCQGGGPIGEAVD 673
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 197/399 (49%), Gaps = 13/399 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FNIL L + + L + + GL PD T+ ++ F + G + V
Sbjct: 193 PDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRV 252
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF-GCEPNVFTYNTLINGLY 133
+++ + VT L+ G C E RI EA ++ + G P+ +T+N L+NGL
Sbjct: 253 KEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLS 312
Query: 134 RTGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKDENINPDVV 181
+TGH AL + + M + + G VD+A ++ QM + + +P+ V
Sbjct: 313 KTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTV 372
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY ++I C N EA L + + +G+ P+V T+N ++ LC + A L M
Sbjct: 373 TYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEM 432
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
G P+ F YN L+D C G++ A L ME GC V +Y+ LI+G+CKNK I
Sbjct: 433 KTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRI 492
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A ++ +M +G+ + V YNTL L + +VE A +L D+M +G+ D +TY +
Sbjct: 493 AEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSL 552
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ CK I +A ++ +T+ CE DI Y LI GL
Sbjct: 553 LTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGL 591
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 150/321 (46%), Gaps = 31/321 (9%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P ++N + L K + L L G+ PD+ TYN LI C +S
Sbjct: 365 RDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLC----LSR 420
Query: 71 GFVVLGRILRSCFT----PNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
V + + T P+ T+ LI LC ++ EA L ++ V GC NV TYN
Sbjct: 421 NHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYN 480
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
TLI+G + + +A+E+F QM+ + ++ + VTY ++
Sbjct: 481 TLIDGFCKNKR-----------------------IAEAEEIFDQMELQGVSRNSVTYNTL 517
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G C + EA L+ +M+ +G++P+ T+N ++ CK G + +A+ ++ M G
Sbjct: 518 IDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGC 577
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+ Y TL+ G C GRV A +L +++ G T +Y+ +I + K + A+
Sbjct: 578 EPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVR 637
Query: 307 LYGEMLSKGIKPDVVIYNTLF 327
L+ EM+ K PD V Y +F
Sbjct: 638 LFREMIEKAEAPDAVTYKIVF 658
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 115/231 (49%), Gaps = 1/231 (0%)
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M I PDV T+ +I+ C A+ A L+ EM D G+ P+ TF IM + G
Sbjct: 186 MVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGN 245
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME-SMGCTHTVFSYS 289
+D A R+ + M++ G N L++GFC GR+ A M G ++++
Sbjct: 246 LDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFN 305
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
+L+NG K ++ AL + ML +G PD+ YN+L L ++ +V+ A K+ ++M
Sbjct: 306 MLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIER 365
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +T TY T I LCK + + EA +L L D+ YN LI GL
Sbjct: 366 DCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGL 416
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 4/210 (1%)
Query: 195 DWNEAKCLLI---EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
D N+ K + I M+ +G++P+V TFN+++ LC+ ++ A L++ M G+ P+
Sbjct: 172 DGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEK 231
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
+ T+M GF G ++ A + M GC T + ++L+NG+CK IE AL EM
Sbjct: 232 TFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEM 291
Query: 312 -LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
L +G PD +N L L + V+ A ++ D M R+G D +TY + I GLCK
Sbjct: 292 SLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGE 351
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ EAV++ + C + YN +I L
Sbjct: 352 VDEAVKVLNQMIERDCSPNTVTYNTIISTL 381
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 3/155 (1%)
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLL-DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
+P+ F ++ +L K G+ D +L ++ I + V N + ++ + G N
Sbjct: 86 KPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLL-VFIESYASFGLYNEIL 144
Query: 271 ELFVSME-SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
+ +ME G Y+ L+N +++ + M+S+GI+PDV +N L
Sbjct: 145 QFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKA 204
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L HQ+ A L +EM+ G+ D T+ T + G
Sbjct: 205 LCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQG 239
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/399 (31%), Positives = 198/399 (49%), Gaps = 18/399 (4%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P PV NIL L +F L ++ + TYN ++N +C+ GR+
Sbjct: 95 PLPVVPCNILIKRLCSGGRVADAERVFATLGASAT---VVTYNTMVNGYCRAGRIEDARR 151
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
++ + F P+ TF LI+ LC R+ +A A+F + GC P+V TY+ L++
Sbjct: 152 LISGMP---FPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATC 208
Query: 134 RTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVV 181
+ A+ L +EM + E + EG VD+A + + PD V
Sbjct: 209 KASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAV 268
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT V++ C + W E + L EM P+ VTFN I+ LC+ G +D A +++D M
Sbjct: 269 TYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHM 328
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G P+ Y++++DG C GRV+ A EL ++S GC +Y+ ++ G C ++
Sbjct: 329 SEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQW 388
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A L EM+ PD V +NT+ L + V+RA K+ ++M +G D TY +
Sbjct: 389 EHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSI 448
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
IDGLC I +A+EL L+ C+ DI +N L+ GL
Sbjct: 449 IDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGL 487
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 187/391 (47%), Gaps = 15/391 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+FD ML+ R P V +++IL K Y + L + + G PD+ TYN+LIN
Sbjct: 182 LAVFDDMLH-RGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLIN 240
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C G V +L + P+AVT+T ++K LC R E LF ++ C P
Sbjct: 241 AMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAP 300
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKEL 167
+ T+NT++ L + G A+ + + M+ +G V G VD A EL
Sbjct: 301 DEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDV-GRVDDAVEL 359
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
++K PD + YT+V++G C W A+ L+ EM+ P+ VTFN ++ LC+
Sbjct: 360 LSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQ 419
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
G +D A ++++ M + G P+ YN+++DG C ++ A EL +++S GC + +
Sbjct: 420 KGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVT 479
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
++ L+ G C E A L M+ PD +NT+ L + + +A + M
Sbjct: 480 FNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMA 539
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
+G + TY +D L K EA++L
Sbjct: 540 ENGCIPNQSTYNIVVDALLKAGKTQEALKLL 570
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 184/401 (45%), Gaps = 12/401 (2%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P PP +FN L L L++F + G P + TY+IL++ CK
Sbjct: 157 PFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQA 216
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
V+L + P+ VT+ LI +C E + EA + + L GC+P+ TY ++
Sbjct: 217 MVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKS 276
Query: 132 LYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPD 179
L + LF EMAS +G VD+A ++ M + PD
Sbjct: 277 LCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPD 336
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
+VTY+S++ G C ++A LL + G +P+ + + ++ LC + + A L+
Sbjct: 337 IVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMA 396
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M+ P+ +NT++ C G V+RA ++ M GC + +Y+ +I+G C +
Sbjct: 397 EMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNER 456
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
I+ A+ L + S G KPD+V +NTL L + + E A +L M D T+
Sbjct: 457 CIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFN 516
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
T I LC+ +++A+E + + C + YN ++D L
Sbjct: 517 TVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDAL 557
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 190/397 (47%), Gaps = 14/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ + L ++ + V LF + S PD T+N ++ C+ G V V
Sbjct: 265 PDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKV 324
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + P+ VT++S++ GLC R+ +A L ++L+ +GC+P+ Y T++ GL
Sbjct: 325 VDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCS 384
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
A L EM + +G VD+A ++ QM + NPD+VT
Sbjct: 385 IEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVT 444
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S+I G C ++A LL + G +P++VTFN ++ LC + ++A +L+ M+
Sbjct: 445 YNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMM 504
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
P+A +NT++ C G + +A E M GC +Y+I+++ K + +
Sbjct: 505 HSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQ 564
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL L M + PD++ YNT+ + + ++E A L M +G++ DT TYR+
Sbjct: 565 EALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLA 622
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G+C+ A+ + L+ + D YN ++ G
Sbjct: 623 YGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLG 659
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 197/417 (47%), Gaps = 24/417 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M + + +P V +FN + L + D + + ++ G PD+ TY+ +++
Sbjct: 289 LFAEMASNKCAPDEV-TFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGL 347
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +GRV +L R+ P+ + +T+++KGLC+ + A L ++ C P+
Sbjct: 348 CDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDE 407
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
T+NT+I L + G A+ + E+M+ + E +D A EL
Sbjct: 408 VTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSN 467
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
++ PD+VT+ ++++G C + W +A+ L++ MM P+ TFN ++ LC+ G
Sbjct: 468 LQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGL 527
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ +A L +M + G PN YN ++D G+ A +L M + T + +Y+
Sbjct: 528 LLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNT 585
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+I+ K ++E AL L M+S G+ PD + Y +L + +RA ++ +Q G
Sbjct: 586 VISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMG 645
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE---------LDIRAYNCLID 398
++ D Y + G C+N A++ F + C L+ AY CL+D
Sbjct: 646 LSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLD 702
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 159/363 (43%), Gaps = 47/363 (12%)
Query: 82 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVA 141
C V LIK LC+ R+ +A +F L G V TYNT++NG R G A
Sbjct: 93 CLPLPVVPCNILIKRLCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAGRIEDA 149
Query: 142 LNLFEEMASGNGEFG---------VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
L M F V G V A +F M +P VVTY+ ++ C
Sbjct: 150 RRLISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCK 209
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
A+ + +A LL EM +G +P++VT+NV+++ +C G +DEA +L + G +P+A
Sbjct: 210 ASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVT 269
Query: 253 Y-----------------------------------NTLMDGFCLTGRVNRAKELFVSME 277
Y NT++ C G V+RA ++ M
Sbjct: 270 YTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMS 329
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
GC + +YS +++G C ++ A+ L + S G KPD + Y T+ L I Q E
Sbjct: 330 EHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWE 389
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
A +L EM D T+ T I LC+ + A+++ + C DI YN +I
Sbjct: 390 HAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSII 449
Query: 398 DGL 400
DGL
Sbjct: 450 DGL 452
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 134/302 (44%), Gaps = 25/302 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N + L + D + L L S G PD+ T+N L+ C + R +
Sbjct: 440 PDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQL 499
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ ++ S P+A TF ++I LC + +++A + GC PN TYN +++ L +
Sbjct: 500 MVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLK 559
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G T AL L M +G PD++TY +VI A
Sbjct: 560 AGKTQEALKLLSGMTNGT-------------------------PDLITYNTVISNITKAG 594
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EA LL M+ G+ P+ +T+ + +C+ D A R+L + +G+ P+A YN
Sbjct: 595 KMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYN 654
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
++ GFC R + A + F M S GC +Y IL+ ++ A L + S
Sbjct: 655 DILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSL 714
Query: 315 GI 316
G+
Sbjct: 715 GV 716
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 127/386 (32%), Positives = 204/386 (52%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ +L L KN + SLF + G+ P + Y I+++ + K G +S +
Sbjct: 433 PDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDL 492
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ + +PN F ++I + I E +F K++ G PNV TY TLI+ L +
Sbjct: 493 LNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCK 552
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G VD A F QM +E + P+ V + S++ G C +
Sbjct: 553 LGR-----------------------VDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVD 589
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
W + + L +EM++QG++P++V FN ++ LCK G++ EA RL+D M+ +G++P+ YN
Sbjct: 590 KWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYN 649
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+DG C R++ A +L M S G + SY+ L++GYCK I+ A L+ EML K
Sbjct: 650 TLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRK 709
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+ P V YNT+ LF + A +L+ M + TY +DG CKN+ EA
Sbjct: 710 GVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEA 769
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
++F++L + +LDI +N +IDGL
Sbjct: 770 FKIFQSLCSMDLQLDIITFNIMIDGL 795
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 138/421 (32%), Positives = 213/421 (50%), Gaps = 28/421 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLN------STGLFPDLYTYN 56
+FD +L + P V + N L +++ K + R N S + PD TY+
Sbjct: 30 LFDELL-LHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPDCCTYS 88
Query: 57 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA-AALFTKLRV 115
I+I CFC++GR+ GF G IL++ + + + L+KGLC R+ EA L ++
Sbjct: 89 IVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPE 148
Query: 116 FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG----------------NGEFGVEG 159
GC V +YNTL+ GL A L M G NG F EG
Sbjct: 149 VGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFN-EG 207
Query: 160 FVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 219
VDKA LFL+M ++PDVVTY ++I G C A + + A+ + +M+++GV+PN VT+N
Sbjct: 208 QVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYN 264
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
I+D LCK ++D A + M+ GV+P+ YNT++DG C V+RA+ +F M
Sbjct: 265 TIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDR 324
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G +Y+ +I+G CK + I+ A ++ +M+ KG+KPD + Y + L + V+RA
Sbjct: 325 GVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRA 384
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+F +M GV + TY I G E V+ + + E D+ Y L+D
Sbjct: 385 EGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDY 444
Query: 400 L 400
L
Sbjct: 445 L 445
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/467 (26%), Positives = 216/467 (46%), Gaps = 85/467 (18%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+NI+ D SLF + G+ PD+ TYN +I+ CK V V
Sbjct: 191 PDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDV 247
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ PN VT+ ++I GLC + A +F K+ G +P+ TYNT+I+GL +
Sbjct: 248 FQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCK 307
Query: 135 TGHTIVALNLFEEMASGNGEFG-------VEGF-----VDKAKELFLQMKDENINPDVVT 182
A +F++M + ++G +DKA+ +F QM D+ + PD +T
Sbjct: 308 AQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLT 367
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN---------------------------- 214
YT +I G C A + A+ + +M+D+GV+PN
Sbjct: 368 YTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMS 427
Query: 215 -------VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
V T+ +++D LCKNGK +EA L D MI+ G++P+ +Y ++ G+ G ++
Sbjct: 428 AHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALS 487
Query: 268 RAKEL-----------------------------------FVSMESMGCTHTVFSYSILI 292
+L F+ M+ G + V +Y LI
Sbjct: 488 EMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLI 547
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
+ CK ++ A+ + +M+++G+ P+ V++N+L L + + E+ +LF EM G+
Sbjct: 548 DALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIR 607
Query: 353 ADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
D + T + LCK ++EA L ++ + + D+ +YN LIDG
Sbjct: 608 PDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDG 654
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 189/381 (49%), Gaps = 23/381 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FN + AK D V+ +F ++ GL P++ TY LI+ CK+GRV + +++
Sbjct: 508 FNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMI 567
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
TPN V F SL+ GLC + + LF ++ G P++ +NT++ L + G +
Sbjct: 568 NEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVM 627
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
A L + M + PDV++Y ++I G C+A+ +EA
Sbjct: 628 EARRLIDSMVC-----------------------MGLKPDVISYNTLIDGHCFASRMDEA 664
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
LL M+ G++PN+V++N ++ CK G++D A L M++ GV P YNT+++G
Sbjct: 665 VKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNG 724
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
+GR + A+EL+V+M ++ +YSI+++G+CKN + A ++ + S ++ D
Sbjct: 725 LFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLD 784
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
++ +N + LF+ + E A LF + +G+ TYR + L + + E LF
Sbjct: 785 IITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFS 844
Query: 380 TLRILKCELDIRAYNCLIDGL 400
+ + N LI L
Sbjct: 845 VMEKSGTAPNSHMLNALIRKL 865
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 130/408 (31%), Positives = 209/408 (51%), Gaps = 18/408 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D ML+ R P V ++ +L + K+ + + + + + G P++ TYN++IN
Sbjct: 167 LLDDMLH-RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGM 225
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ GRV L R+ F P+ V++T+++KGLCA R + LF ++ C PN
Sbjct: 226 CREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNE 285
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFL 169
T++ L+ R G A+ + E+M SG+G +G VD A +
Sbjct: 286 VTFDMLVRFFCRGGMVERAIQVLEQM-SGHGCAANTTLCNIVINTICKQGRVDDAFQFLN 344
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
M +PD ++YT+V++G C A W +AK LL EM+ + PN VTFN + LC+ G
Sbjct: 345 NMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKG 404
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+++A+ L++ M + G N YN L++GFC+ GRV+ A ELF SM C +Y+
Sbjct: 405 LIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYT 461
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
L+ G C + ++ A L EML K P+VV +N L + ++ A +L ++M
Sbjct: 462 TLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEH 521
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
G + TY T +DG+ K+ EA+EL L DI Y+ +I
Sbjct: 522 GCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSII 569
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 185/382 (48%), Gaps = 29/382 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N L + D L + S + PD YTY +I C GRV +L +
Sbjct: 115 AYNTLVAGYCRYGQLDAARRL---IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDM 171
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
L P+ VT+T L++ +C + +A + ++R GC PN+ TYN +ING+ R
Sbjct: 172 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCR---- 227
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
EG VD A+E ++ PD V+YT+V++G C A W +
Sbjct: 228 -------------------EGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWED 268
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
+ L EMM++ PN VTF++++ C+ G ++ A ++L+ M G N + N +++
Sbjct: 269 VEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVIN 328
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
C GRV+ A + +M S GC+ SY+ ++ G C+ + E A L EM+ K P
Sbjct: 329 TICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 388
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
+ V +NT +L + +E+A L ++M G + TY ++G C + A+ELF
Sbjct: 389 NEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF 448
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
+ + C+ + Y L+ GL
Sbjct: 449 YS---MPCKPNTITYTTLLTGL 467
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/379 (30%), Positives = 185/379 (48%), Gaps = 15/379 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F++L + + + + ++++ G + NI+IN CK GRV F
Sbjct: 283 PNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQF 342
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + +P+ +++T+++KGLC R +A L ++ C PN T+NT I L +
Sbjct: 343 LNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQ 402
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
G A L E+M+ E F V+G VD A ELF M P+ +T
Sbjct: 403 KGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTIT 459
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+++ G C A + A LL EM+ + PNVVTFNV++ C+ G MDEA L++ M+
Sbjct: 460 YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM 519
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G PN YNTL+DG A EL + S G + + +YS +I + +E
Sbjct: 520 EHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVE 579
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ ++ + G++P VIYN + + L + + A F M +G + TY T I
Sbjct: 580 EAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLI 639
Query: 363 DGLCKNSYIVEAVELFRTL 381
+GL ++ E +L R L
Sbjct: 640 EGLANEDFLKETRDLLREL 658
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 180/398 (45%), Gaps = 15/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S+ + L K ++ V LF + P+ T+++L+ FC+ G V V
Sbjct: 248 PDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQV 307
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ N +I +C + R+ +A + +GC P+ +Y T++ GL R
Sbjct: 308 LEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCR 367
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
A L +EM N +G +++A L QM + ++VT
Sbjct: 368 AERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVT 427
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++ GFC + A L M +PN +T+ ++ LC ++D A+ LL M+
Sbjct: 428 YNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEML 484
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q PN +N L+ FC G ++ A EL M GCT + +Y+ L++G K+ E
Sbjct: 485 QKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSE 544
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL L ++S G+ PD+V Y+++ VL +VE A K+F +Q G+ Y +
Sbjct: 545 EALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKIL 604
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LCK A++ F + C + Y LI+GL
Sbjct: 605 LALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGL 642
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 145/317 (45%), Gaps = 26/317 (8%)
Query: 84 TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALN 143
P+ T LI+ LC R +AA + G +VF YNTL+ G R G
Sbjct: 75 APDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQ------ 128
Query: 144 LFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
+D A+ L M + PD TYT +IRG C EA LL
Sbjct: 129 -----------------LDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLL 168
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
+M+ +G QP+VVT+ V+++ +CK+ +A +LD M G PN YN +++G C
Sbjct: 169 DDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCRE 228
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
GRV+ A+E + S G SY+ ++ G C K E L+ EM+ K P+ V +
Sbjct: 229 GRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF 288
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
+ L VERA ++ ++M G AA+T I+ +CK + +A + +
Sbjct: 289 DMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGS 348
Query: 384 LKCELDIRAYNCLIDGL 400
C D +Y ++ GL
Sbjct: 349 YGCSPDTISYTTVLKGL 365
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 154/340 (45%), Gaps = 9/340 (2%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
NI+ + K D + S G PD +Y ++ C+ R +L ++R
Sbjct: 324 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 383
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
PN VTF + I LC + I +A L ++ GCE N+ TYN L+NG G
Sbjct: 384 KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDS 443
Query: 141 ALNLFEEMASGNGEFGVEGFV---------DKAKELFLQMKDENINPDVVTYTSVIRGFC 191
AL LF M + D A EL +M ++ P+VVT+ ++ FC
Sbjct: 444 ALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFC 503
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
+EA L+ +MM+ G PN++T+N ++D + K+ +EA LL ++ GV P+
Sbjct: 504 QKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIV 563
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
Y++++ RV A ++F ++ +G Y+ ++ CK +GA+ + M
Sbjct: 564 TYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYM 623
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
+S G P+ + Y TL L ++ L E+ GV
Sbjct: 624 VSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 3/214 (1%)
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
+R +D EA L+ +G P+V ++ LC+ G+ +A+R+L + G
Sbjct: 50 LRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGT 109
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+ F YNTL+ G+C G+++ A+ L SM ++Y+ +I G C + ALS
Sbjct: 110 AVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALS 166
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L +ML +G +P VV Y L + + +A ++ DEM+ G + TY I+G+C
Sbjct: 167 LLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMC 226
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + +A E L + D +Y ++ GL
Sbjct: 227 REGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGL 260
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 3/182 (1%)
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
N + L + EA+RL+D G P+ ++ L+ C GR + A + + E
Sbjct: 47 NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
G VF+Y+ L+ GYC+ +++ A L M + PD Y + L + +V
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGE 163
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A L D+M G TY ++ +CK++ +A+E+ +R C +I YN +I+
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223
Query: 399 GL 400
G+
Sbjct: 224 GM 225
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 98/235 (41%), Gaps = 23/235 (9%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P P ++ L L + D L + P++ T+N+L++ FC+ G +
Sbjct: 452 PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEA 511
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
++ +++ TPN +T+ +L+ G+ + EA L L G P++ TY+++I
Sbjct: 512 IELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGV 571
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
L R E V++A ++F ++D + P V Y ++ C
Sbjct: 572 LSR-----------------------EDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALC 608
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
+ + A M+ G PN +T+ +++ L + E LL + GV
Sbjct: 609 KRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 130/408 (31%), Positives = 209/408 (51%), Gaps = 18/408 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D ML+ R P V ++ +L + K+ + + + + + G P++ TYN++IN
Sbjct: 198 LLDDMLH-RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGM 256
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ GRV L R+ F P+ V++T+++KGLCA R + LF ++ C PN
Sbjct: 257 CREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNE 316
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFL 169
T++ L+ R G A+ + E+M SG+G +G VD A +
Sbjct: 317 VTFDMLVRFFCRGGMVERAIQVLEQM-SGHGCAANTTLCNIVINTICKQGRVDDAFQFLN 375
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
M +PD ++YT+V++G C A W +AK LL EM+ + PN VTFN + LC+ G
Sbjct: 376 NMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKG 435
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+++A+ L++ M + G N YN L++GFC+ GRV+ A ELF SM C +Y+
Sbjct: 436 LIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYT 492
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
L+ G C + ++ A L EML K P+VV +N L + ++ A +L ++M
Sbjct: 493 TLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEH 552
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
G + TY T +DG+ K+ EA+EL L DI Y+ +I
Sbjct: 553 GCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSII 600
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 185/382 (48%), Gaps = 29/382 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N L + D L + S + PD YTY +I C GRV +L +
Sbjct: 146 AYNTLVAGYCRYGQLDAARRL---IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDM 202
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
L P+ VT+T L++ +C + +A + ++R GC PN+ TYN +ING+ R
Sbjct: 203 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCR---- 258
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
EG VD A+E ++ PD V+YT+V++G C A W +
Sbjct: 259 -------------------EGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWED 299
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
+ L EMM++ PN VTF++++ C+ G ++ A ++L+ M G N + N +++
Sbjct: 300 VEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVIN 359
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
C GRV+ A + +M S GC+ SY+ ++ G C+ + E A L EM+ K P
Sbjct: 360 TICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 419
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
+ V +NT +L + +E+A L ++M G + TY ++G C + A+ELF
Sbjct: 420 NEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF 479
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
+ + C+ + Y L+ GL
Sbjct: 480 YS---MPCKPNTITYTTLLTGL 498
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 116/379 (30%), Positives = 185/379 (48%), Gaps = 15/379 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F++L + + + + ++++ G + NI+IN CK GRV F
Sbjct: 314 PNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQF 373
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + +P+ +++T+++KGLC R +A L ++ C PN T+NT I L +
Sbjct: 374 LNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQ 433
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
G A L E+M+ E F V+G VD A ELF M P+ +T
Sbjct: 434 KGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTIT 490
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+++ G C A + A LL EM+ + PNVVTFNV++ C+ G MDEA L++ M+
Sbjct: 491 YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM 550
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G PN YNTL+DG A EL + S G + + +YS +I + +E
Sbjct: 551 EHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVE 610
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ ++ + G++P VIYN + + L + + A F M +G + TY T I
Sbjct: 611 EAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLI 670
Query: 363 DGLCKNSYIVEAVELFRTL 381
+GL ++ E +L R L
Sbjct: 671 EGLANEDFLKETRDLLREL 689
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 180/398 (45%), Gaps = 15/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S+ + L K ++ V LF + P+ T+++L+ FC+ G V V
Sbjct: 279 PDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQV 338
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ N +I +C + R+ +A + +GC P+ +Y T++ GL R
Sbjct: 339 LEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCR 398
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
A L +EM N +G +++A L QM + ++VT
Sbjct: 399 AERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVT 458
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++ GFC + A L M +PN +T+ ++ LC ++D A+ LL M+
Sbjct: 459 YNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEML 515
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q PN +N L+ FC G ++ A EL M GCT + +Y+ L++G K+ E
Sbjct: 516 QKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSE 575
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL L ++S G+ PD+V Y+++ VL +VE A K+F +Q G+ Y +
Sbjct: 576 EALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKIL 635
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LCK A++ F + C + Y LI+GL
Sbjct: 636 LALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGL 673
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 145/316 (45%), Gaps = 26/316 (8%)
Query: 85 PNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNL 144
P+ T LI+ LC R +AA + G +VF YNTL+ G R G
Sbjct: 107 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQ------- 159
Query: 145 FEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
+D A+ L M + PD TYT +IRG C EA LL
Sbjct: 160 ----------------LDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLD 200
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
+M+ +G QP+VVT+ V+++ +CK+ +A +LD M G PN YN +++G C G
Sbjct: 201 DMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREG 260
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
RV+ A+E + S G SY+ ++ G C K E L+ EM+ K P+ V ++
Sbjct: 261 RVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFD 320
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
L VERA ++ ++M G AA+T I+ +CK + +A + +
Sbjct: 321 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 380
Query: 385 KCELDIRAYNCLIDGL 400
C D +Y ++ GL
Sbjct: 381 GCSPDTISYTTVLKGL 396
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 154/340 (45%), Gaps = 9/340 (2%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
NI+ + K D + S G PD +Y ++ C+ R +L ++R
Sbjct: 355 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 414
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
PN VTF + I LC + I +A L ++ GCE N+ TYN L+NG G
Sbjct: 415 KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDS 474
Query: 141 ALNLFEEMASGNGEFGVEGFV---------DKAKELFLQMKDENINPDVVTYTSVIRGFC 191
AL LF M + D A EL +M ++ P+VVT+ ++ FC
Sbjct: 475 ALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFC 534
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
+EA L+ +MM+ G PN++T+N ++D + K+ +EA LL ++ GV P+
Sbjct: 535 QKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIV 594
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
Y++++ RV A ++F ++ +G Y+ ++ CK +GA+ + M
Sbjct: 595 TYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYM 654
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
+S G P+ + Y TL L ++ L E+ GV
Sbjct: 655 VSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 694
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 3/199 (1%)
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
L+ +G P+V ++ LC+ G+ +A+R+L + G + F YNTL+ G+C
Sbjct: 96 LVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYC 155
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
G+++ A+ L SM ++Y+ +I G C + ALSL +ML +G +P VV
Sbjct: 156 RYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVV 212
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
Y L + + +A ++ DEM+ G + TY I+G+C+ + +A E L
Sbjct: 213 TYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRL 272
Query: 382 RILKCELDIRAYNCLIDGL 400
+ D +Y ++ GL
Sbjct: 273 SSYGFQPDTVSYTTVLKGL 291
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 3/167 (1%)
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A+RL+D G P+ ++ L+ C GR + A + + E G VF+Y+ L+
Sbjct: 93 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
GYC+ +++ A L M + PD Y + L + +V A L D+M G
Sbjct: 153 GYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY ++ +CK++ +A+E+ +R C +I YN +I+G+
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGM 256
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 98/235 (41%), Gaps = 23/235 (9%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P P ++ L L + D L + P++ T+N+L++ FC+ G +
Sbjct: 483 PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEA 542
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
++ +++ TPN +T+ +L+ G+ + EA L L G P++ TY+++I
Sbjct: 543 IELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGV 602
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
L R E V++A ++F ++D + P V Y ++ C
Sbjct: 603 LSR-----------------------EDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALC 639
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
+ + A M+ G PN +T+ +++ L + E LL + GV
Sbjct: 640 KRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 694
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 52/133 (39%), Gaps = 3/133 (2%)
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
RA L S G V+ + LI C+ A + G DV YNTL
Sbjct: 92 RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
Q++ A +L M VA D +TY I GLC + EA+ L + C+
Sbjct: 152 AGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 208
Query: 388 LDIRAYNCLIDGL 400
+ Y L++ +
Sbjct: 209 PSVVTYTVLLEAV 221
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 129/397 (32%), Positives = 204/397 (51%), Gaps = 24/397 (6%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
FD ML+ P V ++NIL L H LS+ + + G P++ TYN L+ F
Sbjct: 178 FDSMLS-DGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFF 236
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ G V ++G + PN VTF S++ G+C ++ +A +F ++ G P+
Sbjct: 237 RAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGV 296
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
+YNTL+ G + G + AL++F EM + I PDVVT+
Sbjct: 297 SYNTLVGGYCKAGCSHEALSVFAEMT-----------------------QKGIMPDVVTF 333
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
TS+I C A + A L+ +M ++G+Q N VTF ++D CK G +D+A + M Q
Sbjct: 334 TSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQ 393
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
++P+ YN L++G+C+ GR++ A+EL ME+ G V +YS +I+ YCKN +
Sbjct: 394 CRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHS 453
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A L +ML KG+ PD + Y++L VL ++ A LF M + G+ D +TY + ID
Sbjct: 454 AFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLID 513
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G CK + A+ L + D+ Y+ LI+GL
Sbjct: 514 GHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGL 550
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 198/447 (44%), Gaps = 76/447 (17%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+ +P V S+N L G K LS+F + G+ PD+ T+ LI+
Sbjct: 282 VFDEMVREGLAPDGV-SYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVM 340
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G + ++ ++ N VTFT+LI G C + + +A ++ +P+V
Sbjct: 341 CKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSV 400
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
YN LING + + G +D+A+EL +M+ + + PDVVT
Sbjct: 401 VCYNALING-----------------------YCMVGRMDEARELLHEMEAKGLKPDVVT 437
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+++I +C D + A L +M+++GV P+ +T++ ++ LC ++ +A L MI
Sbjct: 438 YSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMI 497
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY------- 295
++G++P+ F Y +L+DG C G V A L M G V +YS+LING
Sbjct: 498 KLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAM 557
Query: 296 ---------------------------CKNKEIEGALSL----------------YGEML 312
C+ E++ L+L Y ML
Sbjct: 558 EAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSML 617
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
+ D +Y+ L V +A +M + G A ++ + + I GL +N +V
Sbjct: 618 DRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVV 677
Query: 373 EAVELFRTLRILKCEL-DIRAYNCLID 398
EA ++ + L + C L D A LID
Sbjct: 678 EADQVIQQL-LNYCSLADAEASKALID 703
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 141/283 (49%), Gaps = 24/283 (8%)
Query: 117 GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI 176
G P+V YN ++ L + + A+ F M + +
Sbjct: 151 GYVPSVLAYNAVLLALS------------------------DASLTSARRFFDSMLSDGV 186
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
P+V TY ++R C EA +L +M G PNVVT+N ++ + G++D A R
Sbjct: 187 APNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAER 246
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
L+ +M + G++PN +N++++G C G++ A+++F M G SY+ L+ GYC
Sbjct: 247 LVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYC 306
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K ALS++ EM KGI PDVV + +L V+ + +ERA L +M+ G+ +
Sbjct: 307 KAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEV 366
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
T+ IDG CK ++ +A+ R ++ + + + YN LI+G
Sbjct: 367 TFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALING 409
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 134/405 (33%), Positives = 208/405 (51%), Gaps = 22/405 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L L K + LF+ + G P + TYN +I+ CK GR+ + +
Sbjct: 28 PDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTL 87
Query: 75 LGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ + F P VT+++LI GLC + + + L ++ GC PN TYNTL+N L
Sbjct: 88 YDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALL 147
Query: 134 RTGHTIVALNLFEEMASGNG------EFGV-------EGFVDKA----KELFLQMKDENI 176
G + A +L E+MA+ NG FG+ EG ++ A E+F M + +
Sbjct: 148 GQGRSKEAFSLLEQMAA-NGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMF--MIESGL 204
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
+PDV+T+ SV+ G C +A + +++G +PNVVT++ ++D L K KMDEA +
Sbjct: 205 SPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQ 264
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
LL M+++G R N Y+T++DG GR+ A + M GC +Y+ LI+G+
Sbjct: 265 LLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFF 324
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K + + A+ L EML G P VV Y TL L + + A ++ D M G A +
Sbjct: 325 KRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAI 384
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTL-RILKCELDIRAYNCLIDGL 400
TY + +DGLCK + EA+ F + R + AY+ LIDGL
Sbjct: 385 TYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGL 429
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 135/410 (32%), Positives = 202/410 (49%), Gaps = 25/410 (6%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P ++N L L SL +++ + G P+L T+ ++I CK G +
Sbjct: 130 RGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEA 189
Query: 71 GFVVLGRI--LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTL 128
F V+ + + S +P+ +TF S++ GLC E RI++A +F + GC PNV TY+TL
Sbjct: 190 AFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTL 249
Query: 129 INGLYRTGHTIVALNLFEEMASGNGEFGVE----------------GFVDKAKELFLQMK 172
I+GL + AL L +M E G G ++ A + QM+
Sbjct: 250 IDGLSKMAKMDEALQLLAKMV----ELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMR 305
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 232
D PD VTY ++I GF EA LL EM++ G P+VVT+ + LC++G+ D
Sbjct: 306 DAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFD 365
Query: 233 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM--ESMGCTHTVFSYSI 290
EA +LD M G PNA Y++++DG C GRV A F M + + H V +YS
Sbjct: 366 EAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPH-VIAYSA 424
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI+G CK +I+ A M+ G PDVV ++ L L + +++ +LF M G
Sbjct: 425 LIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERG 484
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D TY T +D LC+ S + EA +LF+ +R D +I GL
Sbjct: 485 CVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGL 534
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 179/359 (49%), Gaps = 14/359 (3%)
Query: 1 FCIFDYMLNMRPS-PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILI 59
F + D M + P V +FN + L K + ++FKR G P++ TY+ LI
Sbjct: 191 FRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLI 250
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 119
+ KM ++ +L +++ N VT+++++ GL R+ +A + ++R GC
Sbjct: 251 DGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCL 310
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKEL 167
P+ TYNTLI+G ++ A+ L EM V G D+A E+
Sbjct: 311 PDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEI 370
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM-DQGVQPNVVTFNVIMDELC 226
M P+ +TY+S++ G C A EA +M D+ V P+V+ ++ ++D LC
Sbjct: 371 LDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLC 430
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
K GK+DEA L+ MI+ G P+ ++ L++G C GR++ ELF M GC +
Sbjct: 431 KAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMV 490
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
+Y+ L++ C+ ++ A L+ +M S G+ PD T+ L E+++ E A ++ DE
Sbjct: 491 TYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/361 (31%), Positives = 180/361 (49%), Gaps = 21/361 (5%)
Query: 58 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 117
+I+ CK +V + +++ P+ VT+ +LI GL + R+ EA LF + R G
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 118 CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG-----------VEGF-----V 161
C P V TYNT+I+GL + G AL L+++MA FG ++G V
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAI---HFGFRPTVVTYSTLIDGLCRDHEV 117
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
DK +L +M P+ VTY +++ EA LL +M G P ++TF +I
Sbjct: 118 DKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLI 177
Query: 222 MDELCKNGKMDEASRLLD--LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
+ LCK G+++ A R++D MI+ G+ P+ +N+++DG C R+ A +F
Sbjct: 178 IKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALER 237
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
GC V +YS LI+G K +++ AL L +M+ G + + V Y+T+ L ++ ++E A
Sbjct: 238 GCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDA 297
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ +M+ G D TY T IDG K + EAV L R + + Y L G
Sbjct: 298 VVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHG 357
Query: 400 L 400
L
Sbjct: 358 L 358
>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 578
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 139/466 (29%), Positives = 228/466 (48%), Gaps = 69/466 (14%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M++M P P + F + G +AK ++Y T + L+ + G+ P T+NILINCF
Sbjct: 41 LFHRMVDMHPLPS-IVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNILINCF 99
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C MG++ F V+G+IL+ PN VTFT+L+KG C ++++A ++ ++ +
Sbjct: 100 CHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRIRFDD 159
Query: 123 FTYNTLINGLYRT--GHTIVALNLFEEMASGN-------------GEFGVEGFVDKAKEL 167
Y TLINGL ++ G A+ L ++M +G +++A+ L
Sbjct: 160 VLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEARVL 219
Query: 168 FLQMKDENINPDVVTY----------------TSVIRGFCYANDWNEAKCLLIEMMDQGV 211
+M + I PD+ TY TS++ GFC N +EA+ L M+++G
Sbjct: 220 CSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIERGE 279
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
Q +++ +N++M+ C N K+ EA +L +M++ G +P+ Y LM G+CL +V+ A+
Sbjct: 280 QHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARN 339
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
LF M G V+SY+ILI GYCK + + A++L +M K + P+++ YN++ L
Sbjct: 340 LFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLC 399
Query: 332 EIHQVERAFKLFDEMQ-------------------------------------RDGVAAD 354
+ + A+KL DEM A +
Sbjct: 400 KSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFERSFAPN 459
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
W+Y I G CKN + EA+ LF + DI YN L+D L
Sbjct: 460 VWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDAL 505
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 200/447 (44%), Gaps = 68/447 (15%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCK--MGRVSHGF 72
P V +F L N L ++ + + + D Y LIN CK +G+
Sbjct: 122 PNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAV 181
Query: 73 VVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
+L ++ R PN + + +++ GLC + I EA L +K+ V G P++FTY++LI G
Sbjct: 182 QLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYG 241
Query: 132 LYRTGH----------------TIVALNLFEEMASGNGEFGVEGF------------VDK 163
L R G A LF M + + + V +
Sbjct: 242 LCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGE 301
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
A++LF M + PD +TYT ++ G+C + +EA+ L M+++G+ P+V ++N+++
Sbjct: 302 ARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIK 361
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME------ 277
CK ++ EA LL+ M + PN YN+++DG C +G + A +L M
Sbjct: 362 GYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPP 421
Query: 278 --------------SMGCTH-----------------TVFSYSILINGYCKNKEIEGALS 306
+ C V+SY+ILI+G CKN+ ++ A++
Sbjct: 422 PDVTTYNILLESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAIN 481
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L+ M K + PD+V YN L LF Q+++A L ++ G++ + TY I+GL
Sbjct: 482 LFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLH 541
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAY 393
K A ++ L I D++ Y
Sbjct: 542 KGGRPKTAQKISLYLSIRGYHPDVKTY 568
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 137/294 (46%), Gaps = 27/294 (9%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
+M+ R P ++ IL D +LF + GL PD+++YNILI +CK
Sbjct: 307 HMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKF 366
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP--NVF 123
RV +L + PN +T+ S++ GLC I++A L ++ + C+P +V
Sbjct: 367 ERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMH-YCCQPPPDVT 425
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
TYN L+ L R A+ F+ + + + + P+V +Y
Sbjct: 426 TYNILLESLCRIECVEKAIAFFKHL----------------------IFERSFAPNVWSY 463
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
+I G C +EA L M + + P++VT+N+++D L ++D+A LL ++
Sbjct: 464 NILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVD 523
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
G+ PN YN L++G GR A+++ + + G V +Y +IN CK
Sbjct: 524 QGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHPDVKTY--IINELCK 575
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 126/258 (48%), Gaps = 19/258 (7%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A LF +M D + P +V +T ++ + A L M +GV P VTFN+
Sbjct: 35 IDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNI 94
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C G+MD A ++ +++ G RPN + TLM GFC+ ++ A ++ M +
Sbjct: 95 LINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARR 154
Query: 281 CTHTVFSYSILINGYCKNK--EIEGALSLYGEMLSKG-IKPDVVIYNTLFVVLFEIHQVE 337
Y LING CK+K + A+ L +M + +KP++++YNT+ L + +
Sbjct: 155 IRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNIN 214
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCK----------------NSYIVEAVELFRTL 381
A L +M G+ D +TY + I GLC+ N+ + EA ELF +
Sbjct: 215 EARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVM 274
Query: 382 RILKCELDIRAYNCLIDG 399
+ DI YN L++G
Sbjct: 275 IERGEQHDIINYNILMNG 292
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 105/213 (49%), Gaps = 3/213 (1%)
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C + ++A L M+D P++V F I+ + K A L LM GV P
Sbjct: 30 CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
+N L++ FC G+++ A + + GC V +++ L+ G+C N ++ AL +Y E
Sbjct: 90 VTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDE 149
Query: 311 MLSKGIKPDVVIYNTLFVVL--FEIHQVERAFKLFDEM-QRDGVAADTWTYRTFIDGLCK 367
M+++ I+ D V+Y TL L +I + A +L +M +R V + Y T + GLCK
Sbjct: 150 MVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCK 209
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ I EA L + + DI Y+ LI GL
Sbjct: 210 DGNINEARVLCSKMIVQGIFPDIFTYSSLIYGL 242
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F +++ R P V S+NIL KN+ D ++LF + L PD+ TYNIL++
Sbjct: 447 FKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALF 506
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
++ +L +I+ +PN T+ LI GL R A + L + G P+V
Sbjct: 507 NGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHPDVK 566
Query: 124 TYNTLINGLYRTG 136
TY +IN L + G
Sbjct: 567 TY--IINELCKGG 577
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 126/386 (32%), Positives = 197/386 (51%), Gaps = 24/386 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLS-LFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P V S+N + + + K + +FK + +G+ P++YTYNILI FC G + G
Sbjct: 165 PGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLX 224
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
G + R+ PN VT+ ++I C +I EA L + + G PN+ +YN +INGL
Sbjct: 225 FFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLC 284
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
R EG + + E+ +M PD VT+ ++I G+C
Sbjct: 285 R-----------------------EGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNV 321
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
++++A L EM+ G+ PNVVT+ +++ +CK G ++ A LD M G+ PN Y
Sbjct: 322 GNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTY 381
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
TL+DGF G + +A ++ M G T T+ +Y+ LING+C +E A L EM+
Sbjct: 382 TTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIE 441
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+G PDVV Y+T+ ++E+AF+L EM G++ D TY + I GLCK + E
Sbjct: 442 RGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGE 501
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
+LF+ + L D Y LI+
Sbjct: 502 VCDLFQEMLSLGLPPDEVTYTSLINA 527
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 179/403 (44%), Gaps = 37/403 (9%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
++ R P +FN L ++ L L + GL P++ TY LIN CK G
Sbjct: 299 MSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGN 358
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
++ L ++ PN T+T+LI G + + +A + ++ G P + TYN
Sbjct: 359 LNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNA 418
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFG-----------VEGF-----VDKAKELFLQM 171
LING G A L +EM E G + GF ++KA +L ++M
Sbjct: 419 LINGHCILGRMEDASGLLQEMI----ERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEM 474
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+PDV TY+S+I+G C E L EM+ G+ P+ VT+ +++ C G +
Sbjct: 475 VAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDL 534
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
D+A RL D MIQ G P+ YN L++GF R AK L + + +Y+ L
Sbjct: 535 DKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTL 594
Query: 292 INGYCKNKEIEGALSLYG----------------EMLSKGIKPDVVIYNTLFVVLFEIHQ 335
I+ C N E + AL+L ML KG K + +YN + ++
Sbjct: 595 IDN-CNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGN 653
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
+E+A+ L+ EM G A + T L VE +L
Sbjct: 654 IEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLL 696
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 156/319 (48%), Gaps = 23/319 (7%)
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
C + +AV F ++K + I +A ++ + +G P V +YN +++ + RT ++
Sbjct: 127 QCKSSSAV-FDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSV- 184
Query: 141 ALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
++A G +F +M + ++P+V TY +IRGFC A +
Sbjct: 185 ------KIAEG---------------IFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGL 223
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
EM G PNVVT+N I+D CK K+ EA +LL LM G+ PN YN +++G
Sbjct: 224 XFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGL 283
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
C G++ E+ M +++ LINGYC AL L+ EM+ G+ P+V
Sbjct: 284 CREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNV 343
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
V Y TL + + + RA + D+M+ G+ + TY T IDG + ++ +A ++ +
Sbjct: 344 VTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKE 403
Query: 381 LRILKCELDIRAYNCLIDG 399
+ I YN LI+G
Sbjct: 404 MVENGFTPTIITYNALING 422
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 103/229 (44%), Gaps = 8/229 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ L L K + V LF+ + S GL PD TY LIN +C G + +
Sbjct: 481 PDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRL 540
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ F+P+ VT+ LI G +SR EA L KL PN TYNTLI+
Sbjct: 541 HDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNN 600
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
L +A G F ++G +++A + M + + Y +I G
Sbjct: 601 -------LEFKSALALMKG-FCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVG 652
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
+ +A L EM+ G P+ VT + L GK E ++LLD ++
Sbjct: 653 NIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLK 701
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 1/155 (0%)
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE-IEGAL 305
+ ++ V++ ++ +N+A + +S G V SY+ +++ + K+ ++ A
Sbjct: 129 KSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAE 188
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
++ EM+ G+ P+V YN L +E F EM+R+G + TY T ID
Sbjct: 189 GIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAY 248
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
CK I EA +L R + + ++ +YN +I+GL
Sbjct: 249 CKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGL 283
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 126/386 (32%), Positives = 197/386 (51%), Gaps = 24/386 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLS-LFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P V S+N + + + K + +FK + +G+ P++YTYNILI FC G + G
Sbjct: 165 PGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLF 224
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
G + R+ PN VT+ ++I C +I EA L + + G PN+ +YN +INGL
Sbjct: 225 FFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLC 284
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
R EG + + E+ +M PD VT+ ++I G+C
Sbjct: 285 R-----------------------EGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNV 321
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
++++A L EM+ G+ PNVVT+ +++ +CK G ++ A LD M G+ PN Y
Sbjct: 322 GNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTY 381
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
TL+DGF G + +A ++ M G T T+ +Y+ LING+C +E A L EM+
Sbjct: 382 TTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIE 441
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+G PDVV Y+T+ ++E+AF+L EM G++ D TY + I GLCK + E
Sbjct: 442 RGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGE 501
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
+LF+ + L D Y LI+
Sbjct: 502 VCDLFQEMLSLGLPPDEVTYTSLINA 527
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 179/403 (44%), Gaps = 37/403 (9%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
++ R P +FN L ++ L L + GL P++ TY LIN CK G
Sbjct: 299 MSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGN 358
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
++ L ++ PN T+T+LI G + + +A + ++ G P + TYN
Sbjct: 359 LNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNA 418
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFG-----------VEGF-----VDKAKELFLQM 171
LING G A L +EM E G + GF ++KA +L ++M
Sbjct: 419 LINGHCILGRMEDASGLLQEMI----ERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEM 474
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+PDV TY+S+I+G C E L EM+ G+ P+ VT+ +++ C G +
Sbjct: 475 VAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDL 534
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
D+A RL D MIQ G P+ YN L++GF R AK L + + +Y+ L
Sbjct: 535 DKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTL 594
Query: 292 INGYCKNKEIEGALSLYG----------------EMLSKGIKPDVVIYNTLFVVLFEIHQ 335
I+ C N E + AL+L ML KG K + +YN + ++
Sbjct: 595 IDN-CNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGN 653
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
+E+A+ L+ EM G A + T L VE +L
Sbjct: 654 IEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLL 696
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 156/319 (48%), Gaps = 23/319 (7%)
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
C + +AV F ++K + I +A ++ + +G P V +YN +++ + RT ++
Sbjct: 127 QCKSSSAV-FDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSV- 184
Query: 141 ALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
++A G +F +M + ++P+V TY +IRGFC A +
Sbjct: 185 ------KIAEG---------------IFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGL 223
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
EM G PNVVT+N I+D CK K+ EA +LL LM G+ PN YN +++G
Sbjct: 224 FFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGL 283
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
C G++ E+ M +++ LINGYC AL L+ EM+ G+ P+V
Sbjct: 284 CREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNV 343
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
V Y TL + + + RA + D+M+ G+ + TY T IDG + ++ +A ++ +
Sbjct: 344 VTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKE 403
Query: 381 LRILKCELDIRAYNCLIDG 399
+ I YN LI+G
Sbjct: 404 MVENGFTPTIITYNALING 422
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 103/229 (44%), Gaps = 8/229 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ L L K + V LF+ + S GL PD TY LIN +C G + +
Sbjct: 481 PDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRL 540
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ F+P+ VT+ LI G +SR EA L KL PN TYNTLI+
Sbjct: 541 HDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNN 600
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
L +A G F ++G +++A + M + + Y +I G
Sbjct: 601 -------LEFKSALALMKG-FCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVG 652
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
+ +A L EM+ G P+ VT + L GK E ++LLD ++
Sbjct: 653 NIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLK 701
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 1/155 (0%)
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE-IEGAL 305
+ ++ V++ ++ +N+A + +S G V SY+ +++ + K+ ++ A
Sbjct: 129 KSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAE 188
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
++ EM+ G+ P+V YN L +E F EM+R+G + TY T ID
Sbjct: 189 GIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAY 248
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
CK I EA +L R + + ++ +YN +I+GL
Sbjct: 249 CKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGL 283
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 135/404 (33%), Positives = 203/404 (50%), Gaps = 28/404 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDT---VLSLFKRLN---STGLFPDLYTYN 56
+FD +L P V +FN L +A+ + T +SLF R+ S + PDL TY+
Sbjct: 36 LFDELLP-HARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDLCTYS 94
Query: 57 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA-ALFTKLRV 115
IL CFC++GR+ HGF G IL++ + N V L+ GLC R+ EA L ++
Sbjct: 95 ILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPE 154
Query: 116 FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDEN 175
FGC PNV + NTL+ GL AL L MA G N
Sbjct: 155 FGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGG--------------------N 194
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
P+VVTY ++I G C A + A+ +L M+D+GV+ +VVT++ I+D LCK +D A
Sbjct: 195 CTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAE 254
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+L MI GV+P+ YNT++DG C V+RA+ + M G V +Y+ +I+G
Sbjct: 255 GVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGL 314
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
CK + ++ A + M+ K +KPD+ YN L + + + +EM G+ D
Sbjct: 315 CKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDV 374
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
TY +D LCKN EA ++F + + ++ Y L+ G
Sbjct: 375 VTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHG 418
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 128/402 (31%), Positives = 207/402 (51%), Gaps = 19/402 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ +M++ + P + ++N L + V+ + + + GL PD+ TY++L++
Sbjct: 326 VLQHMID-KDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYL 384
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G+ + + ++R PN + L+ G A I + L + G PN
Sbjct: 385 CKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNN 444
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNG------EFGVE-------GFVDKAKELFL 169
+ +N ++ + A+++F M S +G +G+ G VD A F
Sbjct: 445 YIFNIVLCAYAKKAMIDEAMHIFSRM-SQHGLSPDVVTYGILIDALCKLGRVDDAVLKFN 503
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
QM ++ + P+ V + S++ G C + W +A+ L EM DQGV+PNVV FN IM LC G
Sbjct: 504 QMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEG 563
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
++ A RL+D M ++GVRPN YNTL+ G CL GR + A +L M S+G + SY
Sbjct: 564 QVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYD 623
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
L+ GYCK I+ A L+ EML KG+ P V Y+T+ LF + A +L+ M +
Sbjct: 624 TLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKS 683
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIR 391
G D +TY ++GLCK + + EA ++F++L C D+R
Sbjct: 684 GQQWDIYTYNIILNGLCKTNCVDEAFKIFQSL----CSKDLR 721
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 193/381 (50%), Gaps = 23/381 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FNI+ AK D + +F R++ GL PD+ TY ILI+ CK+GRV + +++
Sbjct: 447 FNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMI 506
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
TPN+V F SL+ GLC R +A LF ++ G PNV +NT++ L G +
Sbjct: 507 NDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVM 566
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
VA L + M+ + P+V++Y ++I G C A +EA
Sbjct: 567 VAQRLID-----------------------SMERVGVRPNVISYNTLIGGHCLAGRTDEA 603
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
LL M+ G++P++++++ ++ CK G++D A L M++ GV P A Y+T++ G
Sbjct: 604 AQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQG 663
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
T R + AKEL+++M G +++Y+I++NG CK ++ A ++ + SK ++P+
Sbjct: 664 LFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPN 723
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
++ + + VLF+ + + A LF + G+ + TY + + + + E LF
Sbjct: 724 IITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFL 783
Query: 380 TLRILKCELDIRAYNCLIDGL 400
+ C D N +I L
Sbjct: 784 AMEKSGCTPDSVMLNAIIRSL 804
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 194/411 (47%), Gaps = 15/411 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ +M++ + P V ++N + L K + D + + + + PD+ TYN LI+ +
Sbjct: 291 VLQHMID-KGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGY 349
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
G L + P+ VT++ L+ LC + EA +F + G +PNV
Sbjct: 350 LSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNV 409
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFL 169
Y L++G Y I L ++ NG + + +D+A +F
Sbjct: 410 TIYGILLHG-YAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFS 468
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M ++PDVVTY +I C ++A +M++ GV PN V FN ++ LC
Sbjct: 469 RMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVD 528
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+ ++A L M GVRPN +NT+M C G+V A+ L SME +G V SY+
Sbjct: 529 RWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYN 588
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
LI G+C + A L M+S G+KPD++ Y+TL + +++ A+ LF EM R
Sbjct: 589 TLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRK 648
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GV TY T + GL EA EL+ + + DI YN +++GL
Sbjct: 649 GVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGL 699
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 194/384 (50%), Gaps = 14/384 (3%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V ++++L L KN +F + G+ P++ Y IL++ + G ++
Sbjct: 368 RGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIAD 427
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+L ++ + +PN F ++ ++ I EA +F+++ G P+V TY LI+
Sbjct: 428 LTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILID 487
Query: 131 GLYRTGHTIVALNLFEEMASGN-------------GEFGVEGFVDKAKELFLQMKDENIN 177
L + G A+ F +M + G V+ + +KA+ELF +M D+ +
Sbjct: 488 ALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRW-EKAEELFFEMWDQGVR 546
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P+VV + +++ C A+ L+ M GV+PNV+++N ++ C G+ DEA++L
Sbjct: 547 PNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQL 606
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
LD+M+ +G++P+ Y+TL+ G+C TGR++ A LF M G T +YS ++ G
Sbjct: 607 LDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFH 666
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+ A LY M+ G + D+ YN + L + + V+ AFK+F + + + T
Sbjct: 667 TRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIIT 726
Query: 358 YRTFIDGLCKNSYIVEAVELFRTL 381
+ ID L K +A++LF ++
Sbjct: 727 FTIMIDVLFKGGRKKDAMDLFASI 750
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 142/295 (48%), Gaps = 27/295 (9%)
Query: 15 PPVCSFNILFG--CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
P V S+N L G CLA D L + S GL PDL +Y+ L+ +CK GR+ + +
Sbjct: 582 PNVISYNTLIGGHCLAGRT--DEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAY 639
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+ +LR TP AVT++++++GL R EA L+ + G + +++TYN ++NGL
Sbjct: 640 CLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGL 699
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+T VD+A ++F + +++ P+++T+T +I
Sbjct: 700 CKTN-----------------------CVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFK 736
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
+A L + G+ PNVVT+ ++M + + G +DE L M + G P++ +
Sbjct: 737 GGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVM 796
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
N ++ G + RA ++ M + + S+LI+ + + + A SL
Sbjct: 797 LNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSREEYKNHAKSL 851
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 129/398 (32%), Positives = 205/398 (51%), Gaps = 13/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + L+ + + F + S G+ P++YTYNIL+ C G V
Sbjct: 121 PSVLAYNAVLLALS-DASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSV 179
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + PNAVT+ +L+ C + A L +R G +PN+ T+N+++NG+ +
Sbjct: 180 LRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICK 239
Query: 135 TGHTIVALNLFEEMAS-GNGEFGVE-----------GFVDKAKELFLQMKDENINPDVVT 182
G A +F+EM G GV G +A +F +M + I PDVVT
Sbjct: 240 AGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVT 299
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+TS+I C A + A L+ EM ++G+Q N +TF ++D CK G +D+A + M
Sbjct: 300 FTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMR 359
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q ++P+ YN L++G+C+ GR++ A+EL ME+ G V +YS +++ YCKN +
Sbjct: 360 QCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTH 419
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L +ML G+ PD + Y++L VL E ++ A LF M G+ D TY + I
Sbjct: 420 SAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLI 479
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
DG CK + A+ L + D+ Y+ LI+GL
Sbjct: 480 DGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGL 517
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 133/458 (29%), Positives = 213/458 (46%), Gaps = 63/458 (13%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
FD ML+ P V ++NIL L H LS+ + + G P+ TYN L+ FC
Sbjct: 145 FDSMLS-DGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFC 203
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ G V ++ + PN VTF S++ G+C R+ +A +F ++ G P+
Sbjct: 204 RAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGV 263
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMA--------------------SGNGEFGV------ 157
+YNTL+ G + G + AL++F EM +GN E V
Sbjct: 264 SYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREM 323
Query: 158 ---------------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+GF+D A +M+ I P VV Y ++I G+C
Sbjct: 324 RERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRM 383
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+EA+ L+ EM +GV+P+VVT++ I+ CKNG A +L M++ GV P+A Y++L
Sbjct: 384 DEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSL 443
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ C R+ A LF +M S+G +Y+ LI+G+CK +E ALSL+ EM+ G+
Sbjct: 444 IRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGV 503
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKL---------------FDEMQRDGVAADTWTYRTF 361
PDVV Y+ L L + + + A +L +D + R A+ +
Sbjct: 504 LPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLAL 563
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ G C + EA ++++++ LD Y+ LI G
Sbjct: 564 LKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHG 601
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 195/447 (43%), Gaps = 64/447 (14%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +FN + + K + +F + GL PD +YN L+ +CK+G V
Sbjct: 225 PNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSV 284
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R P+ VTFTSLI +C + A L ++R G + N T+ LI+G +
Sbjct: 285 FAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCK 344
Query: 135 TGHTIVALNLFEEM-------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G AL EM A NG + + G +D+A+EL +M+ + + PDVV
Sbjct: 345 KGFLDDALLAVREMRQCRIQPSVVCYNALING-YCMVGRMDEARELVREMEAKGVKPDVV 403
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY++++ +C D + A L +M++ GV P+ +T++ ++ LC+ ++ +A L M
Sbjct: 404 TYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNM 463
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY------ 295
I +G++P+ Y +L+DG C G V RA L M G V +YS+LING
Sbjct: 464 ISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSART 523
Query: 296 ----------------------------CKNKEIEGALSL----------------YGEM 311
C+N E++ L+L Y +
Sbjct: 524 KEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSI 583
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
L + D +Y+ L V +A +M + G A ++ + + I GL + +
Sbjct: 584 LDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMV 643
Query: 372 VEAVELFRTLRILKCELDIRAYNCLID 398
VEA ++ + L D A LID
Sbjct: 644 VEADQVIQQLLNCCSLADAEASKALID 670
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 126/293 (43%), Gaps = 27/293 (9%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ + KN + L +++ G+ PD TY+ LI C+ R+ V+
Sbjct: 400 PDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVL 459
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ P+ VT+TSLI G C E + A +L ++ G P+V TY+ LINGL +
Sbjct: 460 FKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSK 519
Query: 135 TGHTIVALNLF-----EEMASGNGE----------------------FGVEGFVDKAKEL 167
+ T A L EE N + F ++G +++A ++
Sbjct: 520 SARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKV 579
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
+ + D N N D Y+ +I G C + +A +M+ G PN + ++ L +
Sbjct: 580 YQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFE 639
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
G + EA +++ ++ +A L+D G V+ ++ M G
Sbjct: 640 KGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDG 692
>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 447
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 204/374 (54%), Gaps = 13/374 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ +L +R +PP + F + G L K KHY T +SL +++ G+ P+L T NILINCFC
Sbjct: 53 FNRLLLVRHTPP-IIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFC 111
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+G+++ F VLG+IL+ + P+ +T +L+KGLC + + + K+ G + N
Sbjct: 112 HLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQV 171
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
+Y TL+NGL + G T A+ L + + V + V++A + F +M
Sbjct: 172 SYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEM 231
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
I P+V+TY+++I GFC A A LL EM+ + + PNV T+N+++D LCK GK+
Sbjct: 232 NARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKV 291
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA +LL M G + YN+++DG C + +++A LF+ M+ G ++Y+ L
Sbjct: 292 KEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTAL 351
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I+G CK ++ A L+ +L KG DV YN + L + ++A + +M+ +G
Sbjct: 352 IDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGC 411
Query: 352 AADTWTYRTFIDGL 365
+ T+ I L
Sbjct: 412 IPNAVTFDIIIRSL 425
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 117/244 (47%)
Query: 157 VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
+E VD F ++ P ++ + ++ + A L +M +G++PN+V
Sbjct: 42 IENVVDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLV 101
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
T N++++ C G+M + +L ++++G +P+ NTLM G CL G V R+ +
Sbjct: 102 TLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKV 161
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
+ G SY L+NG CK E A+ L + + +PDVV+Y+T+ L + V
Sbjct: 162 VAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIV 221
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
+A+ F EM G+ + TY T I G C ++ A L + + ++ YN L
Sbjct: 222 NQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNIL 281
Query: 397 IDGL 400
ID L
Sbjct: 282 IDAL 285
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
++ + P V ++N + L K+++ D +LF ++ G+ P+ YTY LI+ CK GR
Sbjct: 301 MHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGR 360
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ + + +L + T+ +I GLC E +A A+ +K+ GC PN T++
Sbjct: 361 LKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDI 420
Query: 128 LINGLYRTGHTIVALNLFEEMAS 150
+I L+ A L M +
Sbjct: 421 IIRSLFEKDENDKAEKLLHGMIA 443
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 208/408 (50%), Gaps = 18/408 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D ML+ R P V ++ +L + K+ + + + + + G P++ TYN++IN
Sbjct: 167 LLDDMLH-RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGM 225
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ GRV L R+ F P+ V++T+++KGLCA R + LF ++ C PN
Sbjct: 226 CREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNE 285
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFL 169
T++ L+ R G A+ + E+M SG+G +G VD A +
Sbjct: 286 VTFDMLVRFFCRGGMVERAIQVLEQM-SGHGCAANTTLCNIVINTICKQGRVDDAFQFLN 344
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
M +PD ++YT+V++G C A W +AK LL EM+ + PN VTFN + LC+ G
Sbjct: 345 NMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKG 404
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+++A+ L++ M + G N YN L++GFC+ GRV+ A ELF SM C +Y+
Sbjct: 405 LIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYT 461
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
L+ G C + ++ A L EML K P+VV +N L + ++ A +L ++M
Sbjct: 462 TLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEH 521
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
G + TY T +DG+ + EA+EL L DI Y+ +I
Sbjct: 522 GCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSII 569
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 185/382 (48%), Gaps = 29/382 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N L + D L + S + PD YTY +I C GRV +L +
Sbjct: 115 AYNTLVAGYCRYGQLDAARRL---IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDM 171
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
L P+ VT+T L++ +C + +A + ++R GC PN+ TYN +ING+ R
Sbjct: 172 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCR---- 227
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
EG VD A+E ++ PD V+YT+V++G C A W +
Sbjct: 228 -------------------EGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWED 268
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
+ L EMM++ PN VTF++++ C+ G ++ A ++L+ M G N + N +++
Sbjct: 269 VEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVIN 328
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
C GRV+ A + +M S GC+ SY+ ++ G C+ + E A L EM+ K P
Sbjct: 329 TICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 388
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
+ V +NT +L + +E+A L ++M G + TY ++G C + A+ELF
Sbjct: 389 NEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF 448
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
+ + C+ + Y L+ GL
Sbjct: 449 YS---MPCKPNTITYTTLLTGL 467
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 116/379 (30%), Positives = 185/379 (48%), Gaps = 15/379 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F++L + + + + ++++ G + NI+IN CK GRV F
Sbjct: 283 PNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQF 342
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + +P+ +++T+++KGLC R +A L ++ C PN T+NT I L +
Sbjct: 343 LNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQ 402
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
G A L E+M+ E F V+G VD A ELF M P+ +T
Sbjct: 403 KGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTIT 459
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+++ G C A + A LL EM+ + PNVVTFNV++ C+ G MDEA L++ M+
Sbjct: 460 YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM 519
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G PN YNTL+DG A EL + S G + + +YS +I + +E
Sbjct: 520 EHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVE 579
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ ++ + G++P VIYN + + L + + A F M +G + TY T I
Sbjct: 580 EAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLI 639
Query: 363 DGLCKNSYIVEAVELFRTL 381
+GL ++ E +L R L
Sbjct: 640 EGLANEDFLKETRDLLREL 658
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 179/398 (44%), Gaps = 15/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S+ + L K ++ V LF + P+ T+++L+ FC+ G V V
Sbjct: 248 PDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQV 307
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ N +I +C + R+ +A + +GC P+ +Y T++ GL R
Sbjct: 308 LEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCR 367
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
A L +EM N +G +++A L QM + ++VT
Sbjct: 368 AERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVT 427
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++ GFC + A L M +PN +T+ ++ LC ++D A+ LL M+
Sbjct: 428 YNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEML 484
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q PN +N L+ FC G ++ A EL M GCT + +Y+ L++G + E
Sbjct: 485 QKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSE 544
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL L ++S G+ PD+V Y+++ VL +VE A K+F +Q G+ Y +
Sbjct: 545 EALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKIL 604
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LCK A++ F + C + Y LI+GL
Sbjct: 605 LALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGL 642
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 145/317 (45%), Gaps = 26/317 (8%)
Query: 84 TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALN 143
P+ T LI+ LC R +AA + G +VF YNTL+ G R G
Sbjct: 75 APDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQ------ 128
Query: 144 LFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
+D A+ L M + PD TYT +IRG C EA LL
Sbjct: 129 -----------------LDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLL 168
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
+M+ +G QP+VVT+ V+++ +CK+ +A +LD M G PN YN +++G C
Sbjct: 169 DDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCRE 228
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
GRV+ A+E + S G SY+ ++ G C K E L+ EM+ K P+ V +
Sbjct: 229 GRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF 288
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
+ L VERA ++ ++M G AA+T I+ +CK + +A + +
Sbjct: 289 DMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGS 348
Query: 384 LKCELDIRAYNCLIDGL 400
C D +Y ++ GL
Sbjct: 349 YGCSPDTISYTTVLKGL 365
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 153/340 (45%), Gaps = 9/340 (2%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
NI+ + K D + S G PD +Y ++ C+ R +L ++R
Sbjct: 324 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 383
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
PN VTF + I LC + I +A L ++ GCE N+ TYN L+NG G
Sbjct: 384 KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDS 443
Query: 141 ALNLFEEMASGNGEFGVEGFV---------DKAKELFLQMKDENINPDVVTYTSVIRGFC 191
AL LF M + D A EL +M ++ P+VVT+ ++ FC
Sbjct: 444 ALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFC 503
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
+EA L+ +MM+ G PN++T+N ++D + + +EA LL ++ GV P+
Sbjct: 504 QKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIV 563
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
Y++++ RV A ++F ++ +G Y+ ++ CK +GA+ + M
Sbjct: 564 TYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYM 623
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
+S G P+ + Y TL L ++ L E+ GV
Sbjct: 624 VSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 3/214 (1%)
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
+R +D EA L+ +G P+V ++ LC+ G+ +A+R+L + G
Sbjct: 50 LRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGT 109
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+ F YNTL+ G+C G+++ A+ L SM ++Y+ +I G C + ALS
Sbjct: 110 AVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALS 166
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L +ML +G +P VV Y L + + +A ++ DEM+ G + TY I+G+C
Sbjct: 167 LLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMC 226
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + +A E L + D +Y ++ GL
Sbjct: 227 REGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGL 260
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 3/182 (1%)
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
N + L + EA+RL+D G P+ ++ L+ C GR + A + + E
Sbjct: 47 NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
G VF+Y+ L+ GYC+ +++ A L M + PD Y + L + +V
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGE 163
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A L D+M G TY ++ +CK++ +A+E+ +R C +I YN +I+
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223
Query: 399 GL 400
G+
Sbjct: 224 GM 225
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 98/235 (41%), Gaps = 23/235 (9%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P P ++ L L + D L + P++ T+N+L++ FC+ G +
Sbjct: 452 PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEA 511
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
++ +++ TPN +T+ +L+ G+ + EA L L G P++ TY+++I
Sbjct: 512 IELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGV 571
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
L R E V++A ++F ++D + P V Y ++ C
Sbjct: 572 LSR-----------------------EDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALC 608
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
+ + A M+ G PN +T+ +++ L + E LL + GV
Sbjct: 609 KRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 208/387 (53%), Gaps = 28/387 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N+L G K+ D L + +R++ + PD+ TYN ++ C G++ V
Sbjct: 174 PDVITYNVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEV 230
Query: 75 LGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
L R L R C+ P+ +T+T LI+ C +S + +A L ++R GC+P+V TYN LING+
Sbjct: 231 LDRQLQRECY-PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGIC 289
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ EG +D+A + M P+V+T+ ++R C
Sbjct: 290 K-----------------------EGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCST 326
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
W +A+ LL +M+ +G P+VVTFN++++ LC+ + A +L+ M + G PN+ Y
Sbjct: 327 GRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSY 386
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N L+ GFC +++RA E M S GC + +Y+ L+ CK+ +++ A+ + ++ S
Sbjct: 387 NPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSS 446
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG P ++ YNT+ L ++ + E A +L +EM+R G+ D TY T + GL + + E
Sbjct: 447 KGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDE 506
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A+++F + L + YN ++ GL
Sbjct: 507 AIKIFHDMEGLSIKPSAVTYNAIMLGL 533
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 188/392 (47%), Gaps = 15/392 (3%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
NI L +N + L +R+ G PD+ LI FC+ G+ ++ +
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
S P+ +T+ LI G C I +A + ++ V P+V TYNT++ L +G
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSV---APDVVTYNTILRSLCDSGKLKE 226
Query: 141 ALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
A+ + + V + V +A +L +M+ + PDVVTY +I
Sbjct: 227 AMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 286
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
G C +EA L M G +PNV+T N+I+ +C G+ +A RLL M++ G P
Sbjct: 287 GICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSP 346
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
+ +N L++ C + RA ++ M GC SY+ L++G+C+ K+++ A+
Sbjct: 347 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYL 406
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
M+S+G PD+V YNTL L + +V+ A ++ +++ G + TY T IDGL K
Sbjct: 407 EIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKV 466
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
AVEL +R + DI Y+ L+ GL
Sbjct: 467 GKTEYAVELLEEMRRKGLKPDIITYSTLLRGL 498
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 175/357 (49%), Gaps = 9/357 (2%)
Query: 53 YTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 112
+ NI + + G + G L R++ P+ + TSLI+G C + +A +
Sbjct: 107 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEI 166
Query: 113 LRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG---------EFGVEGFVDK 163
L G P+V TYN LI G ++G AL + E M+ G + +
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVAPDVVTYNTILRSLCDSGKLKE 226
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
A E+ + PDV+TYT +I C + +A LL EM +G +P+VVT+NV+++
Sbjct: 227 AMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 286
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
+CK G++DEA + L+ M G +PN +N ++ C TGR A+ L M GC+
Sbjct: 287 GICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSP 346
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
+V +++ILIN C+ + + A+ + +M G P+ + YN L + +++RA +
Sbjct: 347 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYL 406
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ M G D TY T + LCK+ + AVE+ L C + YN +IDGL
Sbjct: 407 EIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGL 463
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 141/292 (48%), Gaps = 12/292 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N+L + K D + + S G P++ T+NI++ C GR +
Sbjct: 276 PDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERL 335
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +LR +P+ VTF LI LC + + A + K+ GC PN +YN L++G +
Sbjct: 336 LSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQ 395
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
A+ E M S +G VD A E+ Q+ + +P ++T
Sbjct: 396 EKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLIT 455
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +VI G A LL EM +G++P+++T++ ++ L + GK+DEA ++ M
Sbjct: 456 YNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDME 515
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+ ++P+A YN +M G C + +RA + M GC T +Y+ILI G
Sbjct: 516 GLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEG 567
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 57/126 (45%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
L+ + P + ++N + L K + + L + + GL PD+ TY+ L+ + G
Sbjct: 443 QLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREG 502
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+V + + P+AVT+ +++ GLC + A + GC+P TY
Sbjct: 503 KVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYT 562
Query: 127 TLINGL 132
LI G+
Sbjct: 563 ILIEGI 568
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 135/390 (34%), Positives = 200/390 (51%), Gaps = 13/390 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML MRP PPP F+ + L KNKHY TV+SLFK+ S G+ P+L T NILINCFC
Sbjct: 81 FNRMLLMRP-PPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFC 139
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ ++ F V IL+ + P+A+T +LIKGLC I A K+ G + +
Sbjct: 140 HLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQV 199
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQM 171
+Y TLINGL + G T L ++ + + V + V A +L+ +M
Sbjct: 200 SYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEM 259
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+P+V TY ++I GFC + EA LL EM + + P+V TFN+++D L K GK+
Sbjct: 260 IVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKI 319
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
DEA L + M + PN Y +L+DG C + RA L M+ G V+SY+IL
Sbjct: 320 DEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTIL 379
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
++ CK +E A + +L KG +V YN + L + L +M+ G
Sbjct: 380 LDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGC 439
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
D T++T I L + +A + R +
Sbjct: 440 MPDAITFKTIICALFEKDENDKAEKFLREM 469
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 138/398 (34%), Positives = 206/398 (51%), Gaps = 16/398 (4%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + N + LA+N+ V LF L P+++T+NI+I+ CK G +
Sbjct: 166 PPNTRTCNHILLRLARNRQGGLVRRLFDLLP----VPNVFTFNIVIDFLCKEGELVEARA 221
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ R+ +P+ VT+ SLI G + E L +++R GC +V TYN LIN
Sbjct: 222 LFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFS 281
Query: 134 RTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
+ G A + F EM F EG V +A +LF QM+ + P+
Sbjct: 282 KFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEF 341
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYTS++ G C A ++A LL EM+ QG+ PNVVT+ V++D LCK GK+ EA +L LM
Sbjct: 342 TYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLM 401
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ GV+ N +Y TL+ G + RA +L M++ G V Y LI G CK++++
Sbjct: 402 ERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKV 461
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A SL +M G++P+ VIY T+ LF+ + A L ++ G + TY
Sbjct: 462 DEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCAL 521
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
IDGLCK I EA+ F +R L + +++AY LIDG
Sbjct: 522 IDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDG 559
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 193/431 (44%), Gaps = 49/431 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L K + V L + +G D+ TYN LINCF K GR+ +
Sbjct: 233 PDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSY 292
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
G + R N VTF++ + C E + EA LF ++RV G PN FTY +L++G +
Sbjct: 293 FGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCK 352
Query: 135 TGHTIVALNLFEEMASG------------------------------------------- 151
G A+ L +EM
Sbjct: 353 AGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELL 412
Query: 152 -----NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
+G F + ++A +L QMK++ + DV Y ++I G C +EAK LL +M
Sbjct: 413 YTTLIHGHF-MNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKM 471
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
G++PN V + IMD L K GK EA LL ++ G +PN Y L+DG C G +
Sbjct: 472 AGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSI 531
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ A F M +G V +Y+ LI+G+CK + A+ L EM+ KG+ D V+Y +L
Sbjct: 532 SEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSL 591
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
+ ++ AF L +M G+ D + Y FI G C + + EA + +
Sbjct: 592 IDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGI 651
Query: 387 ELDIRAYNCLI 397
D YNCLI
Sbjct: 652 TPDKTVYNCLI 662
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 180/373 (48%), Gaps = 12/373 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +F+ K + LF ++ G+ P+ +TY L++ CK GR+ V+L
Sbjct: 305 VVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLD 364
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ PN VT+T ++ GLC E ++ EA + + + G + N Y TLI+G +
Sbjct: 365 EMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNN 424
Query: 137 HTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYT 184
++ AL+L +M + E V + VD+AK L +M + P+ V YT
Sbjct: 425 NSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYT 484
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+++ A +EA LL +++D G QPNVVT+ ++D LCK G + EA + M ++
Sbjct: 485 TIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMREL 544
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G+ PN Y L+DGFC G +N+A L M G + Y+ LI+GY K ++ A
Sbjct: 545 GLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDA 604
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
+L +M+ G++ D+ Y ++ ++ A + EM G+ D Y I
Sbjct: 605 FALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRK 664
Query: 365 LCKNSYIVEAVEL 377
K + EA L
Sbjct: 665 YQKLGNMEEASSL 677
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 161/345 (46%), Gaps = 27/345 (7%)
Query: 56 NILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV 115
+ L++ G + L R+ + PN T ++ L + LF L V
Sbjct: 138 DTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFDLLPV 197
Query: 116 FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDEN 175
PNVFT+N +I+ L + G + +A+ LF++MK
Sbjct: 198 ----PNVFTFNIVIDFLCKEGELV-----------------------EARALFVRMKAMG 230
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+PDVVTY S+I G+ D E + L+ EM G +VVT+N +++ K G+M++A
Sbjct: 231 CSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAY 290
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
M + GV N ++T +D FC G V A +LF M G F+Y+ L++G
Sbjct: 291 SYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGT 350
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
CK ++ A+ L EM+ +G+ P+VV Y + L + +V A + M+R GV A+
Sbjct: 351 CKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANE 410
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Y T I G N+ A++L ++ ELD+ Y LI GL
Sbjct: 411 LLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGL 455
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 125/268 (46%), Gaps = 25/268 (9%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V + L L K++ D SL ++ GL P+ Y +++ K G+ S +L
Sbjct: 445 VSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLH 504
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+IL S F PN VT+ +LI GLC I EA + F K+R G +PNV Y LI+G + G
Sbjct: 505 KILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIG 564
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
++KA L +M D+ ++ D V YTS+I G+ +
Sbjct: 565 S-----------------------LNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANL 601
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+A L +M++ G+Q ++ + + C M EA +L MI G+ P+ VYN L
Sbjct: 602 QDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCL 661
Query: 257 MDGFCLTGRVNRAKELFVSMESM--GCT 282
+ + G + A L MES+ CT
Sbjct: 662 IRKYQKLGNMEEASSLQNEMESVLSSCT 689
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 150/353 (42%), Gaps = 47/353 (13%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ +R P ++ L K D + L + GL P++ TY ++++ CK G+
Sbjct: 331 MRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGK 390
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKG------------------------------- 96
V+ VL + R N + +T+LI G
Sbjct: 391 VAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGT 450
Query: 97 ----LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN 152
LC + ++ EA +L K+ G PN Y T+++ L++ G A+ L ++
Sbjct: 451 LIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSG 510
Query: 153 GEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
+ V G + +A F +M++ ++P+V YT++I GFC N+A
Sbjct: 511 FQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAM 570
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
L+ EM+D+G+ + V + ++D K + +A L MI+ G++ + + Y + GF
Sbjct: 571 HLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGF 630
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
C + A+ + M G T Y+ LI Y K +E A SL EM S
Sbjct: 631 CNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEMES 683
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 106/218 (48%), Gaps = 33/218 (15%)
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA---------------------- 250
P+VV + ++ L +G +D+A R L + Q+ V PN
Sbjct: 134 PSVV--DTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRL 191
Query: 251 ---------FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
F +N ++D C G + A+ LFV M++MGC+ V +Y+ LI+GY K ++
Sbjct: 192 FDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDL 251
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E L EM G DVV YN L + ++E+A+ F EM+R GV A+ T+ TF
Sbjct: 252 EEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTF 311
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+D CK + EA++LF +R+ + Y L+DG
Sbjct: 312 VDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDG 349
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/401 (31%), Positives = 208/401 (51%), Gaps = 15/401 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L A+ K + + L + + G P+L TYN+L++ CK+ V V
Sbjct: 55 PNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDV 114
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ +++ F PN +TF SL+ G C + +A L + G PNV TY+ LI+GL +
Sbjct: 115 VKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCK 174
Query: 135 TGHTIVALNLFEEM-ASGNGEFG------VEGF-----VDKAKELFLQMKDENINPDVVT 182
+ + A + EEM ASG + G +++A+++ +M PDVV
Sbjct: 175 SQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVV 234
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+S+I FC + EA+ L EM Q P+VVT+N ++D LCK GK+ EA +LD M
Sbjct: 235 YSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQ 294
Query: 243 QIG-VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G V P+ Y+T+++G C + + A++L M GC V +Y+ +I+G CK +
Sbjct: 295 ESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRL 354
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A L M G P+VV Y TL L + +V+ A ++ +EM+ G + TY T
Sbjct: 355 EEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTM 414
Query: 362 IDGLCKNSYIVEAVELFRTLR--ILKCELDIRAYNCLIDGL 400
++GLC + I EA +L + ++ +C D Y +++ L
Sbjct: 415 VNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNAL 455
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/388 (31%), Positives = 206/388 (53%), Gaps = 19/388 (4%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP + ++N+L L K + K++ G P++ T+N L++ FCK G V
Sbjct: 86 RGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDD 145
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+LG ++ PN VT+++LI GLC + +EA + +++ G P+ FTY+ LI+
Sbjct: 146 ARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIH 205
Query: 131 GLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENIN 177
GL + A + MA G+G F G + +A++ +M+ + +
Sbjct: 206 GLCKADKIEEAEQMLRRMA-GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKS 264
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASR 236
PDVVTY +VI G C EA+ +L +M + G V P+VVT++ +++ LCK+ + EA +
Sbjct: 265 PDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQK 324
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
LLD M + G P+ Y T++DG C GR+ A+ L M+ GC V +Y+ LI+G C
Sbjct: 325 LLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLC 384
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA---A 353
K ++++ A + EM + G P++V YNT+ L +++ A +L M +DG A
Sbjct: 385 KARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM-KDGRAECSP 443
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTL 381
D TYRT ++ L + + EA +L +
Sbjct: 444 DAATYRTIVNALMSSDLVQEAEQLLEQM 471
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 117/371 (31%), Positives = 181/371 (48%), Gaps = 13/371 (3%)
Query: 43 LNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 102
L S G P++ TY LI F + ++ +L + PN VT+ L+ LC S
Sbjct: 48 LRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSM 107
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV---EG 159
+ A + K+ G PNV T+N+L++G + G+ A L M + V
Sbjct: 108 VGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSA 167
Query: 160 FVD---------KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG 210
+D +AKE+ +MK + PD TY+++I G C A+ EA+ +L M G
Sbjct: 168 LIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSG 227
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
P+VV ++ I+ CK+GK+ EA + L M + P+ YNT++DG C G++ A+
Sbjct: 228 CTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQ 287
Query: 271 ELFVSMESMG-CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
+ M+ G V +YS +ING CK+ + A L M G PDVV Y T+
Sbjct: 288 VILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDG 347
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
L + ++E A L M+R G A + TY T I GLCK + EA + +R C +
Sbjct: 348 LCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPN 407
Query: 390 IRAYNCLIDGL 400
+ YN +++GL
Sbjct: 408 LVTYNTMVNGL 418
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 169/339 (49%), Gaps = 27/339 (7%)
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C G + +L + + F P+A T T +I + A + ++ A LR GC+PNV
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAM-ANAGDLDGA--MDHLRSMGCDPNV 57
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TY LI R A+ L EEM ++ P++VT
Sbjct: 58 VTYTALIAAFARAKKLEEAMKLLEEM-----------------------RERGCPPNLVT 94
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++ C + A+ ++ +M++ G PNV+TFN ++D CK G +D+A +LL +M+
Sbjct: 95 YNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMV 154
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+RPN Y+ L+DG C + + AKE+ M++ G T F+YS LI+G CK +IE
Sbjct: 155 AKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIE 214
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A + M G PDVV+Y+++ + ++ A K EM++ + D TY T I
Sbjct: 215 EAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVI 274
Query: 363 DGLCKNSYIVEAVELFRTLRILKCEL-DIRAYNCLIDGL 400
DGLCK I EA + ++ L D+ Y+ +I+GL
Sbjct: 275 DGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGL 313
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
I D M P V +++ + L K+ L R+ G PD+ TY +I+
Sbjct: 289 ILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGL 348
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK GR+ +L + R+ PN VT+T+LI GLC ++ EA + ++R GC PN+
Sbjct: 349 CKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNL 408
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TYNT++NGL +G A L + M G E +PD T
Sbjct: 409 VTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAE---------------------CSPDAAT 447
Query: 183 YTSVIRGFCYANDWNEAKCLLIEM 206
Y +++ ++ EA+ LL +M
Sbjct: 448 YRTIVNALMSSDLVQEAEQLLEQM 471
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 133/390 (34%), Positives = 198/390 (50%), Gaps = 13/390 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML MRP PPP FN + L KNK Y TV+SLFK+ G+ PDL T +ILINCFC
Sbjct: 49 FNRMLLMRP-PPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFC 107
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ ++ F V IL+ + PNA+T +LIKGLC I A K+ G + +
Sbjct: 108 HLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQV 167
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
+Y TLINGL + G T L ++ + + + + A +L+ +M
Sbjct: 168 SYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEM 227
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ I+P+V TYT++I GFC + EA LL EM + + P+V TFN+++D L K GK+
Sbjct: 228 IVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKI 287
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
DEA L + M + PN Y +L+DG C + RA L M+ G V+SY+IL
Sbjct: 288 DEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTIL 347
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
++ CK +E A + +L KG +V YN + L + L +M+ G
Sbjct: 348 LDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGC 407
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+ T++T I L + +A + R +
Sbjct: 408 MPNAITFKTIICALLEKDENDKAEKFLREM 437
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 124/389 (31%), Positives = 207/389 (53%), Gaps = 19/389 (4%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP + ++N+L L K + K++ G P++ T+N L++ FCK G V
Sbjct: 208 RGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDD 267
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+LG ++ PN VT+++LI GLC + +EA + +++ G P+ FTY+ LI+
Sbjct: 268 ARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIH 327
Query: 131 GLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENIN 177
GL + A + MA G+G F G + +A++ +M+ + +
Sbjct: 328 GLCKADKIEEAEQMLRRMA-GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKS 386
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASR 236
PDVVTY +VI G C EA+ +L +M + G V P+VVT++ +++ LCK+ + EA +
Sbjct: 387 PDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQK 446
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
LLD M + G P+ Y T++DG C GR+ A+ L M+ GC V +Y+ LI+G C
Sbjct: 447 LLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLC 506
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA---A 353
K ++++ A + EM + G P++V YNT+ L +++ A +L M +DG A
Sbjct: 507 KARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM-KDGRAECSP 565
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
D TYRT ++ L + + EA +L ++
Sbjct: 566 DAATYRTIVNALMSSDLVQEAEQLLEQMK 594
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/387 (31%), Positives = 193/387 (49%), Gaps = 24/387 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L A+ K + + L + + G P+L TYN+L++ CK+ V V
Sbjct: 177 PNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDV 236
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ +++ F PN +TF SL+ G C + +A L + G PNV TY+ LI+GL +
Sbjct: 237 VKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCK 296
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ + F++ AKE+ +MK + PD TY+++I G C A+
Sbjct: 297 S----------------------QKFLE-AKEVLEEMKTRGVTPDAFTYSALIHGLCKAD 333
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EA+ +L M G P+VV ++ I+ CK+GK+ EA + L M + P+ YN
Sbjct: 334 KIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYN 393
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMG-CTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
T++DG C G++ A+ + M+ G V +YS +ING CK+ + A L M
Sbjct: 394 TVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCK 453
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
G PDVV Y T+ L + ++E A L M+R G A + TY T I GLCK + E
Sbjct: 454 AGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDE 513
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A + +R C ++ YN +++GL
Sbjct: 514 AERVMEEMRNAGCPPNLVTYNTMVNGL 540
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/387 (32%), Positives = 197/387 (50%), Gaps = 27/387 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P VCS+NI+ L L + + S G PD +T+ +I G +
Sbjct: 110 PDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDH 169
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + C PN VT+T+LI ++ EA L ++R GC PN+ TYN L++ L +
Sbjct: 170 LRSM--GC-DPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCK 226
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
A ++ ++M G GF P+V+T+ S++ GFC
Sbjct: 227 LSMVGAAQDVVKKMIEG-------GFA----------------PNVMTFNSLVDGFCKRG 263
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ ++A+ LL M+ +G++PNVVT++ ++D LCK+ K EA +L+ M GV P+AF Y+
Sbjct: 264 NVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYS 323
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ G C ++ A+++ M GCT V YS +I+ +CK+ ++ A EM +
Sbjct: 324 ALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQ 383
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG-VAADTWTYRTFIDGLCKNSYIVE 373
PDVV YNT+ L ++ ++ A + ++MQ G V D TY T I+GLCK+ +VE
Sbjct: 384 RKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVE 443
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A +L + C D+ Y +IDGL
Sbjct: 444 AQKLLDRMCKAGCNPDVVTYTTIIDGL 470
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 121/383 (31%), Positives = 191/383 (49%), Gaps = 27/383 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S+N L L + K + LF+ PD+ +YNI+I+ FC G + +L +
Sbjct: 79 SWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEM 138
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ F P+A T T +I + A + ++ A LR GC+PNV TY LI R
Sbjct: 139 KSAGFAPDAFTHTPIITAM-ANAGDLDGA--MDHLRSMGCDPNVVTYTALIAAFARAKKL 195
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
A+ L EEM ++ P++VTY ++ C +
Sbjct: 196 EEAMKLLEEM-----------------------RERGCPPNLVTYNVLVDALCKLSMVGA 232
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A+ ++ +M++ G PNV+TFN ++D CK G +D+A +LL +M+ G+RPN Y+ L+D
Sbjct: 233 AQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALID 292
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G C + + AKE+ M++ G T F+YS LI+G CK +IE A + M G P
Sbjct: 293 GLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTP 352
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
DVV+Y+++ + ++ A K EM++ + D TY T IDGLCK I EA +
Sbjct: 353 DVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVIL 412
Query: 379 RTLRILKCEL-DIRAYNCLIDGL 400
++ L D+ Y+ +I+GL
Sbjct: 413 EQMQESGDVLPDVVTYSTVINGL 435
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 170/329 (51%), Gaps = 13/329 (3%)
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
F+ A ++ SL++ L + EA LF + CEP+V +YN +I+G G AL
Sbjct: 73 FSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAAL 132
Query: 143 NLFEEMASGNGEFGVEGFVD--------KAKEL---FLQMKDENINPDVVTYTSVIRGFC 191
L EEM S F + F A +L ++ +P+VVTYT++I F
Sbjct: 133 ELLEEMKSAG--FAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFA 190
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
A EA LL EM ++G PN+VT+NV++D LCK + A ++ MI+ G PN
Sbjct: 191 RAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVM 250
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
+N+L+DGFC G V+ A++L M + G V +YS LI+G CK+++ A + EM
Sbjct: 251 TFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEM 310
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
++G+ PD Y+ L L + ++E A ++ M G D Y + I CK+ +
Sbjct: 311 KTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKL 370
Query: 372 VEAVELFRTLRILKCELDIRAYNCLIDGL 400
+EA + + +R + D+ YN +IDGL
Sbjct: 371 LEAQKTLQEMRKQRKSPDVVTYNTVIDGL 399
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 151/309 (48%), Gaps = 26/309 (8%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P +++ L L K + + +R+ +G PD+ Y+ +I+ FCK G+
Sbjct: 310 MKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGK 369
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPNVFTYN 126
+ L + + +P+ VT+ ++I GLC +I EA + +++ G P+V TY+
Sbjct: 370 LLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYS 429
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
T+INGL ++ + A L + M NPDVVTYT++
Sbjct: 430 TVINGLCKSDMLVEAQKLLDRMCKA-----------------------GCNPDVVTYTTI 466
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G C EA+ LL M G PNVVT+ ++ LCK K+DEA R+++ M G
Sbjct: 467 IDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGC 526
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMES--MGCTHTVFSYSILINGYCKNKEIEGA 304
PN YNT+++G C++GR+ A++L M+ C+ +Y ++N + ++ A
Sbjct: 527 PPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEA 586
Query: 305 LSLYGEMLS 313
L +M S
Sbjct: 587 EQLLEQMKS 595
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 116/238 (48%), Gaps = 27/238 (11%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG-LFPDLYTYNILINCFCKM 65
M R SP V ++N + L K + +++ +G + PD+ TY+ +IN CK
Sbjct: 380 MRKQRKSPD-VVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKS 438
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
+ +L R+ ++ P+ VT+T++I GLC R+ EA L ++ GC PNV TY
Sbjct: 439 DMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTY 498
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
TLI+GL + VD+A+ + +M++ P++VTY +
Sbjct: 499 TTLISGLCKARK-----------------------VDEAERVMEEMRNAGCPPNLVTYNT 535
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQ--PNVVTFNVIMDELCKNGKMDEASRLLDLM 241
++ G C + EA+ L+ M D + P+ T+ I++ L + + EA +LL+ M
Sbjct: 536 MVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 130/403 (32%), Positives = 215/403 (53%), Gaps = 22/403 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNST----GLFPDLYTYNILINCFCKMGRVSH 70
P + ++N + L+ D L +RL ++ G+ P++YTYNIL+ C G+
Sbjct: 118 PSLLAYNAVLLALS-----DASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREE 172
Query: 71 GFVVLGRILRSCF-TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
V+G +R PN VT+ +L+ C + A L +R G P++ T+NT++
Sbjct: 173 ALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVV 232
Query: 130 NGLYRTGHTIVALNLFEEMA-SGNGEFGVE-----------GFVDKAKELFLQMKDENIN 177
NGL + G A +F+EMA G GV G + +A +F +M + +
Sbjct: 233 NGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVV 292
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
PDVVT+TS+I C A + A L+ +M ++G++ N TF ++D C+NG +D+A
Sbjct: 293 PDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLA 352
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
+ M + ++P+ YN L++G+C GR++ A+EL ME+ G V +YS +++GYCK
Sbjct: 353 MKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCK 412
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+ + A L +ML KG+ PD + Y++L L E ++ A +LF++M + G+ D +T
Sbjct: 413 IGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFT 472
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Y T IDG CK + +A+ L + D+ Y+ LIDGL
Sbjct: 473 YTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGL 515
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 198/398 (49%), Gaps = 16/398 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L + D L + G+ P L T+N ++N CK GR+ +
Sbjct: 188 PNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKM 247
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R TP+ V++ +L+ G C + EA A+F ++ G P+V T+ +LI+ + R
Sbjct: 248 FDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCR 307
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G+ A+ L +M F GF+D A +M++ I P VV
Sbjct: 308 AGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVC 367
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I G+C +EA+ L+ EM +G++P+VVT++ I+ CK G D A L M+
Sbjct: 368 YNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKML 427
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ GV P+A Y++L+ G C R+ A ELF M +G F+Y+ LI+G+CK ++
Sbjct: 428 KKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQ 487
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
ALSL+ EM+ KG+ PDVV Y+ L L + + + A +L ++ + D Y +
Sbjct: 488 KALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALM 547
Query: 363 DGLCKNSYIVEAVELFR--TLRILKCELDIRAYNCLID 398
C+ + V L + +++ L + D + Y ++D
Sbjct: 548 H-CCRTAEFKSVVALLKGFSMKGLMNQAD-KVYQSMLD 583
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 173/365 (47%), Gaps = 49/365 (13%)
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
+ P+ + + +++ L +++ + A L + G PNV+TYN L+ L G AL
Sbjct: 116 YAPSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEAL 174
Query: 143 NLFEEMASGNG--------------------------------EFGVE------------ 158
+ + G G E GV
Sbjct: 175 GVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNG 234
Query: 159 ----GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
G ++ A+++F +M E + PD V+Y +++ G+C A +EA + EM +GV P+
Sbjct: 235 LCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPD 294
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
VVTF ++ +C+ G ++ A L+ M + G+R N F + L+DGFC G ++ A
Sbjct: 295 VVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMK 354
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
M +V Y++LINGYCK ++ A L EM +KG+KPDVV Y+T+ +I
Sbjct: 355 EMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIG 414
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
+ AF+L +M + GV D TY + I GLC+ + +A ELF + L + D Y
Sbjct: 415 DTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYT 474
Query: 395 CLIDG 399
LIDG
Sbjct: 475 TLIDG 479
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/446 (26%), Positives = 180/446 (40%), Gaps = 97/446 (21%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +FN + L K + +F + GL PD +YN L++ +CK G + V
Sbjct: 223 PSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAV 282
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + P+ VTFTSLI +C + A AL ++R G N FT+ LI+G R
Sbjct: 283 FAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCR 342
Query: 135 TGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKDENINPDVVT 182
G AL +EM + V G +D+A+EL +M+ + + PDVVT
Sbjct: 343 NGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVT 402
Query: 183 YTSVIRGFCYANDWNEA----------------------------------KCLLIEMMD 208
Y++++ G+C D + A C L E M
Sbjct: 403 YSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKML 462
Query: 209 Q-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
Q G+QP+ T+ ++D CK G + +A L D MI+ GV P+ Y+ L+DG + R
Sbjct: 463 QLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTK 522
Query: 268 RAKELF------------VSMES-MGCTHTV-----------FS---------------- 287
A+ L + E+ M C T FS
Sbjct: 523 EAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSML 582
Query: 288 ----------YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
YS+LI+G+C+ I ALS + ++L G P+ +L LFE
Sbjct: 583 DRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTV 642
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFID 363
A + E+ AD T + ID
Sbjct: 643 EADNVIQELLNCCSLADAETSKALID 668
>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 452
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 128/397 (32%), Positives = 203/397 (51%), Gaps = 29/397 (7%)
Query: 10 MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG--- 66
M P + F +F L K H+ TV+SL ++ G+ DL NIL+NCFC +G
Sbjct: 1 MNNPTPTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVC 60
Query: 67 ---RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+V ++ F N V++ +LI GLC A + + +PNV
Sbjct: 61 LNDKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVV 120
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
Y+T+I L + I A +L+ QM + I+PDV+TY
Sbjct: 121 MYSTIIYSLCKDKLVIDAFDLYS-----------------------QMLLKRISPDVITY 157
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
+++ G EA L +M+ + ++P++ TFN+++D LCK G+M +A +L +MI+
Sbjct: 158 NTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIK 217
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
V P+ YN+LMDG+ L + N+A +F +M G T V SYS++ING CK K ++
Sbjct: 218 QSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDE 277
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A++L EM SK + P+ V Y++L L + ++ A+ L +EM G AD TY + +D
Sbjct: 278 AVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLD 337
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LCKN + +A+ L ++ + DI Y L+DGL
Sbjct: 338 ALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGL 374
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 175/351 (49%), Gaps = 38/351 (10%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F ++ ML R SP + +++GCL + + V LF ++ + PD+YT+NIL++
Sbjct: 139 FDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAV-GLFNQMLLKNIKPDIYTFNILVD 197
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK G + VL +++ P+ +T+ SL+ G + +A +F + G P
Sbjct: 198 GLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTP 257
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
+V +Y+ +INGL +T A+NL +EM S +++ P+
Sbjct: 258 DVHSYSVMINGLCKTKMVDEAVNLLKEMHS-----------------------KSMAPNT 294
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY+S+I G + +A L+ EM ++G +V+T+N ++D LCKN ++D+A LL
Sbjct: 295 VTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTK 354
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+ G++P+ + Y L+DG C GR+ A+E++ +LI GY +
Sbjct: 355 IKDQGIQPDIYTYTILVDGLCKNGRLKDAQEVY--------------QILLIKGYHLDSL 400
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
+ ALSL +M G P+ V + L LFE ++A +L EM G+
Sbjct: 401 FDKALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREMIARGL 451
>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 136/393 (34%), Positives = 201/393 (51%), Gaps = 16/393 (4%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML MRP PPP FN + L KNK Y TV+SLFK+ G+ PDL T +ILINCFC
Sbjct: 46 FNLMLLMRP-PPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFC 104
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
++ F V IL+ F P+A+T +LIKGLC I + ++ G + +
Sbjct: 105 HQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQV 164
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
+Y TLINGL + G T L ++ + + V + A +++ +M
Sbjct: 165 SYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEM 224
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK- 230
+ I+PDVVTYT++I GFC EA LL EM + + P+V TF+V++D L K GK
Sbjct: 225 IVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKK 284
Query: 231 --MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
+DEA L + M + P+ YN+L+DG C + RA L M+ G V+SY
Sbjct: 285 KMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSY 344
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+IL++G CK +E A + +L KG +V YN + L + A L +M+
Sbjct: 345 TILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEG 404
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
G + T+RT I L + +A ++ R +
Sbjct: 405 KGCMPNAITFRTIICALSEKDENDKAEKILREM 437
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 115/237 (48%), Gaps = 3/237 (1%)
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
LF Q + I PD+ T + +I FC+ A + ++ +G P+ +T N ++ LC
Sbjct: 80 LFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLC 139
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
G++ + D ++ G + + Y TL++G C G L +E V
Sbjct: 140 FRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVV 199
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
Y+ +IN CKNK + A +Y EM+ KGI PDVV Y TL + +++ AF L +EM
Sbjct: 200 MYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEM 259
Query: 347 QRDGVAADTWTYRTFIDGL---CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + D +T+ ID L K + EA+ LF ++ DI YN LIDGL
Sbjct: 260 KLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGL 316
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 73/162 (45%)
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
+LM+ + P F++N ++ R LF E G T + + SILIN +C
Sbjct: 47 NLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQ 106
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
I A S++ +L +G PD + NTL L ++++ D++ G D +Y
Sbjct: 107 AHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSY 166
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
T I+GLCK L R L + D+ YN +I+ L
Sbjct: 167 GTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSL 208
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 134/435 (30%), Positives = 213/435 (48%), Gaps = 50/435 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + L K + D + +++ + PD TY +I+ + +GR +
Sbjct: 305 PNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKM 364
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R P+ VTF SL+ LC R EAA +F + G +P++ +Y+ L++G
Sbjct: 365 FKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYAT 424
Query: 135 TGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDVV 181
G + NLF M + NG G +D+A +F +M+ + ++P+VV
Sbjct: 425 EGRFVDMNNLFHSM-TDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVV 483
Query: 182 TYTSVI-----------------------------------RGFCYANDWNEAKCLLIEM 206
TY +VI +GFC D +AK L+ EM
Sbjct: 484 TYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEM 543
Query: 207 MDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
MDQG+ +PN+ F+ I+ LC G++ A + +L+I IG RP+ F +N+L+DG+CL G+
Sbjct: 544 MDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGK 603
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
+++A + +M S G V +YS LINGY K+ I+ L L+ EML K +KP V Y+
Sbjct: 604 MDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSL 663
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
+ LF + A K+F EM G A TY + GLC+N+ EA+ LF L +
Sbjct: 664 VLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMN 723
Query: 386 CELDIRAYNCLIDGL 400
+ +I N +I L
Sbjct: 724 LKFEIAILNTMIHAL 738
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 187/381 (49%), Gaps = 14/381 (3%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V ++ IL C + + D + F RL GL D N + C C R
Sbjct: 159 RVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDE 218
Query: 71 GF-VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPNVFTYNTL 128
++L R+ P+A ++ ++IK LC SR EA + ++ + GC P+V +Y +
Sbjct: 219 ALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMV 278
Query: 129 INGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENI 176
I+GL+ G A NLF EM V + +DKA+ + QM D +I
Sbjct: 279 IHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSI 338
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
PD VTYT++I G+ W EA + EM +G+ P++VTFN +MD LCK+ + EA+
Sbjct: 339 QPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAE 398
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+ + G +P+ Y+ L+ G+ GR LF SM G ++ILIN +
Sbjct: 399 IFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHA 458
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K ++ AL ++ EM +G+ P+VV Y T+ L + ++ A + +M G+ +T
Sbjct: 459 KRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTV 518
Query: 357 TYRTFIDGLCKNSYIVEAVEL 377
Y + I G C + +++A EL
Sbjct: 519 VYHSLIQGFCTHGDLIKAKEL 539
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 177/362 (48%), Gaps = 14/362 (3%)
Query: 52 LYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA-AALF 110
++TY IL++C C+ R G R+LR+ + + + +K LC R EA + L
Sbjct: 165 VHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLL 224
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG-------------EFGV 157
++ GC P+ F+YNT+I L + AL++ M G+G +
Sbjct: 225 HRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFM 284
Query: 158 EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
EG + KA LF +M + + P+VVTY S++ C A ++A+ +L +M D +QP+ VT
Sbjct: 285 EGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVT 344
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
+ ++ G+ EA+++ M + G+ P+ +N+LMD C R A E+F S+
Sbjct: 345 YTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIA 404
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
+ G + SYSIL++GY +L+ M GI D +N L + ++
Sbjct: 405 TKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMD 464
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
A +F EM+ GV+ + TY T I LC+ + +A+E + + + + Y+ LI
Sbjct: 465 EALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLI 524
Query: 398 DG 399
G
Sbjct: 525 QG 526
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 193/396 (48%), Gaps = 13/396 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S++IL A + + +LF + G+ D + +NILIN K G + ++
Sbjct: 410 PDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLI 469
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ +PN VT+ ++I LC R+ +A +++ G +PN Y++LI G
Sbjct: 470 FTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCT 529
Query: 135 TGHTIVALNLFEEM-------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G I A L EM +S EG V A+++F + PD+
Sbjct: 530 HGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIF 589
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
T+ S+I G+C ++A +L M+ G +P+VVT++ +++ K+G++D+ L M
Sbjct: 590 TFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREM 649
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ V+P Y+ ++DG GR + AK++F M G ++ +Y+I++ G C+N
Sbjct: 650 LCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCT 709
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A++L+ ++ + +K ++ I NT+ L+++ + E A LF + G+ + TY
Sbjct: 710 DEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVM 769
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
I L K + EA +F ++ C R N +I
Sbjct: 770 IINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDII 805
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 171/368 (46%), Gaps = 13/368 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FNIL AK D L +F + G+ P++ TY +I C+MGR++ L +++
Sbjct: 450 FNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMI 509
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC-EPNVFTYNTLINGLYRTGHT 138
PN V + SLI+G C +++A L +++ G PN+ ++++I+ L G
Sbjct: 510 SIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRV 569
Query: 139 IVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
+ A ++F + + + G +DKA + M PDVVTY+++
Sbjct: 570 MNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTL 629
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G+ + ++ L EM+ + V+P VT+++++D L + G+ A ++ MI+ G
Sbjct: 630 INGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGT 689
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+ Y ++ G C + A LF + +M + + +I+ K K E A
Sbjct: 690 AMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHD 749
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L+ + + G+ P+ Y + + L + VE A +F M++ G A + I L
Sbjct: 750 LFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLL 809
Query: 367 KNSYIVEA 374
+ IV+A
Sbjct: 810 QKGEIVKA 817
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 57/125 (45%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ ++ I+ L +N D ++LF +L + L ++ N +I+ K+ R +
Sbjct: 693 ISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFA 752
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ S PNA T+ +I L E + EA +F+ + GC P+ N +I L + G
Sbjct: 753 SVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKG 812
Query: 137 HTIVA 141
+ A
Sbjct: 813 EIVKA 817
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 44/94 (46%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
N + L K K + LF ++++GL P+ TY ++I K G V ++ +
Sbjct: 731 LNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSME 790
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL 113
++ P++ +I+ L + I++A +K+
Sbjct: 791 KTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKV 824
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 205/407 (50%), Gaps = 16/407 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D ML R P V ++ +L + +N ++ +++ + + G P++ TYN++IN
Sbjct: 165 LLDDMLR-RGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGM 223
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ GRV +L R+ F P+ V++T+L+KGLCA R + LF ++ C PN
Sbjct: 224 CREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNE 283
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
T++ LI R G A+ + E+M +G VD A +L
Sbjct: 284 VTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLND 343
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M NPD ++YT+V++G C A W++AK LL EM+ PN VTFN + LC+ G
Sbjct: 344 MGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGL 403
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+++A L++ M + G YN L++GFC+ G ++ A ELF SM C +Y+
Sbjct: 404 IEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELF---RSMPCKPNTITYTT 460
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L+ G C + ++GA L EML P+VV +N L + +E A +L ++M G
Sbjct: 461 LLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHG 520
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ TY T +DG+ K+ +A+EL L D+ ++ +I
Sbjct: 521 CTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSII 567
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 194/388 (50%), Gaps = 29/388 (7%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
SP V ++N L + H D L + S + PD YTY LI C GRV+
Sbjct: 107 SPVDVFAYNTLVAGYCRYGHLDAARRL---IGSMPVAPDAYTYTPLIRVLCDRGRVADAL 163
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+L +LR PN VT+T L++ +C S +A A+ ++R GC PN+ TYN +ING+
Sbjct: 164 SLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGM 223
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
R EG VD A+EL ++ PD V+YT++++G C
Sbjct: 224 CR-----------------------EGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCA 260
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
+ W++ + L EMM++ PN VTF++++ C+ G ++ A ++L+ M + G N +
Sbjct: 261 SKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTL 320
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
N +++ C GRV+ A +L M S GC SY+ ++ G C+ + + A L EM+
Sbjct: 321 CNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMV 380
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
P+ V +NT +L + +E+A L ++M G TY ++G C +I
Sbjct: 381 RNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHID 440
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
A+ELFR+ + C+ + Y L+ GL
Sbjct: 441 SALELFRS---MPCKPNTITYTTLLTGL 465
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 185/380 (48%), Gaps = 17/380 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F++L + + + + +++ G + NI+IN CK GRV F +
Sbjct: 281 PNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKL 340
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P+ +++T+++KGLC R +A L ++ C PN T+NT I L +
Sbjct: 341 LNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQ 400
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G A+ L E+M+ NG F V+G +D A ELF M P+ +
Sbjct: 401 KGLIEQAIMLIEQMSEHGCTVGVVTYNALVNG-FCVQGHIDSALELFRSMP---CKPNTI 456
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT+++ G C A + A L+ EM+ PNVVTFNV++ C+ G ++EA L++ M
Sbjct: 457 TYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQM 516
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++ G PN YNTL+DG A EL + S G + V ++S +I K I
Sbjct: 517 MEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRI 576
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A+ L+ + G++P V+YN + + L + +++ A F M +G + TY
Sbjct: 577 EEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIIL 636
Query: 362 IDGLCKNSYIVEAVELFRTL 381
I+GL + EA +L L
Sbjct: 637 IEGLAHEGLLKEAQDLLSVL 656
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 188/409 (45%), Gaps = 18/409 (4%)
Query: 7 MLNMRPS---PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
+LN PS P S+ L L +K +D V LF + P+ T+++LI FC
Sbjct: 235 LLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFC 294
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ G V VL ++ N +I +C + R+ +A L + +GC P+
Sbjct: 295 RGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTI 354
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQM 171
+Y T++ GL R A L EM N +G +++A L QM
Sbjct: 355 SYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQM 414
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ VVTY +++ GFC + A L M +PN +T+ ++ LC ++
Sbjct: 415 SEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERL 471
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
D A+ L+ M++ PN +N L+ FC G + A EL M GCT + +Y+ L
Sbjct: 472 DGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTL 531
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
++G K+ E AL L ++SKG+ PDV+ ++++ +L + ++E A +LF +Q G+
Sbjct: 532 LDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGM 591
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Y + GLCK I A++ F + C + Y LI+GL
Sbjct: 592 RPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGL 640
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 148/317 (46%), Gaps = 26/317 (8%)
Query: 84 TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALN 143
P+ T LI+ LC R +AA + G +VF YNTL+ G R GH
Sbjct: 73 APDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGH------ 126
Query: 144 LFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
+D A+ L M + PD TYT +IR C +A LL
Sbjct: 127 -----------------LDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLL 166
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
+M+ +G QPNVVT+ V+++ +C+N ++A +LD M G PN YN +++G C
Sbjct: 167 DDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCRE 226
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
GRV+ A+EL + S G SY+ L+ G C +K + L+ EM+ K P+ V +
Sbjct: 227 GRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTF 286
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
+ L VERA ++ ++M G A +T I+ +CK + +A +L +
Sbjct: 287 DMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGS 346
Query: 384 LKCELDIRAYNCLIDGL 400
C D +Y ++ GL
Sbjct: 347 YGCNPDTISYTTVLKGL 363
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 148/340 (43%), Gaps = 44/340 (12%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
NI+ + K D L + S G PD +Y ++ C+ R +L ++R
Sbjct: 322 NIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVR 381
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
+ PN VTF + I LC + I +A L ++ GC V TYN L+NG GH
Sbjct: 382 NNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDS 441
Query: 141 ALNLFEEMA---------------------SGNGEFGVE--------------------- 158
AL LF M G E E
Sbjct: 442 ALELFRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFC 501
Query: 159 --GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
GF+++A EL QM + P+++TY +++ G +A LL ++ +GV P+V+
Sbjct: 502 QKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVI 561
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
TF+ I+ L K +++EA +L ++ IG+RP A VYN ++ G C ++ A + F M
Sbjct: 562 TFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYM 621
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
S GC +Y ILI G ++ A L + S+G+
Sbjct: 622 VSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGV 661
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 3/191 (1%)
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
G P+V ++ LC+ G+ +A+R+L G + F YNTL+ G+C G ++ A
Sbjct: 71 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 130
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
+ L + SM ++Y+ LI C + ALSL +ML +G +P+VV Y L
Sbjct: 131 RRL---IGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 187
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
+ E+A + DEM+ G + TY I+G+C+ + +A EL L + D
Sbjct: 188 MCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPD 247
Query: 390 IRAYNCLIDGL 400
+Y L+ GL
Sbjct: 248 TVSYTTLLKGL 258
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 205/399 (51%), Gaps = 28/399 (7%)
Query: 6 YMLNMRPSPPPVCSFNILFGCL-----AKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
++ N P V S+N + L + ++ YD +F+ + G+ P++YTYN++I
Sbjct: 156 HLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIR 215
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
G + G + ++ + +PN VT+ +LI C + ++ EA AL + V G
Sbjct: 216 GVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAA 275
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
N+ +YN++INGL G G G EL +M+ + + PD
Sbjct: 276 NLISYNSVINGL-----------------CGKGRMSEVG------ELVEEMRGKGLVPDE 312
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY +++ GFC + ++ LL EM+ +G+ PNVVT+ +++ +CK G + A + D
Sbjct: 313 VTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQ 372
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M G+RPN Y TL+DGFC G +N A ++ M G + +V +Y+ L++GYC
Sbjct: 373 MRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGR 432
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
++ A+ + M+ +G+ PDVV Y+T+ ++ +AF++ +EM GV DT TY +
Sbjct: 433 VQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSS 492
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I GLC +VEA +LFR + D Y LI+
Sbjct: 493 LIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINA 531
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 193/396 (48%), Gaps = 12/396 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N++ + + L +++ G+ P++ TYN LI+ CK +V +
Sbjct: 205 PNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMAL 264
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + N +++ S+I GLC + R+ E L ++R G P+ TYNTL+NG +
Sbjct: 265 LRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCK 324
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G+ L L EM V G + +A E+F QM+ + P+ T
Sbjct: 325 EGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERT 384
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT++I GFC NEA +L EM+ G P+VVT+N ++ C G++ EA +L M+
Sbjct: 385 YTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMV 444
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ P+ Y+T++ GFC + +A ++ M G +YS LI G C +++
Sbjct: 445 ERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLV 504
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ EM+ +G+ PD V Y +L ++ +A +L DEM + G D TY I
Sbjct: 505 EAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLI 564
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
+GL K + A L L + D YN LI+
Sbjct: 565 NGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIE 600
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 194/396 (48%), Gaps = 38/396 (9%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S+N + L V L + + GL PD TYN L+N FCK G + G V+L +
Sbjct: 279 SYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEM 338
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ +PN VT+T+LI +C + A +F ++RV G PN TY TLI+G
Sbjct: 339 VGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDG------- 391
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
F +G +++A ++ +M +P VVTY +++ G+C+ E
Sbjct: 392 ----------------FCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQE 435
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A +L M+++G+ P+VV+++ ++ C+ ++ +A ++ + M++ GV P+ Y++L+
Sbjct: 436 AVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQ 495
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G CL ++ A +LF M G +Y+ LIN YC + E+ AL L+ EM+ +G P
Sbjct: 496 GLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLP 555
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID--------------- 363
D V Y+ L L + + + A +L ++ + D TY T I+
Sbjct: 556 DNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVK 615
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G C + EA +F+T+ + + YN +I G
Sbjct: 616 GFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHG 651
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 156/319 (48%), Gaps = 19/319 (5%)
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
S F+ +AV F ++K L + +A L G P V +YN +++ L R
Sbjct: 127 SPFSSSAV-FDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRS---- 181
Query: 141 ALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
+S + ++ D A+ +F M ++P+V TY +IRG D +
Sbjct: 182 --------SSNHRDY------DDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGL 227
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
+ +M +G+ PNVVT+N ++D CK K+ EA LL M GV N YN++++G
Sbjct: 228 GFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGL 287
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
C GR++ EL M G +Y+ L+NG+CK + L L EM+ KG+ P+V
Sbjct: 288 CGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNV 347
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
V Y TL + + + RA ++FD+M+ G+ + TY T IDG C+ + EA ++
Sbjct: 348 VTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSE 407
Query: 381 LRILKCELDIRAYNCLIDG 399
+ + + YN L+ G
Sbjct: 408 MIVSGFSPSVVTYNALVHG 426
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 158/328 (48%), Gaps = 35/328 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L C+ K + + +F ++ GL P+ TY LI+ FC+ G ++ + V
Sbjct: 345 PNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKV 404
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ S F+P+ VT+ +L+ G C R+ EA + + G P+V +Y+T+I G R
Sbjct: 405 LSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCR 464
Query: 135 TGHTIVALNLFEEMASGNGEFGV-----------EGFVDKAK-----ELFLQMKDENINP 178
A + EEM E GV +G + K +LF +M + P
Sbjct: 465 ERELGKAFQMKEEMV----EKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPP 520
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D VTYTS+I +C + ++A L EM+ +G P+ VT++V+++ L K + A RLL
Sbjct: 521 DEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLL 580
Query: 239 DLMIQIGVRPNAFVYNTLMD---------------GFCLTGRVNRAKELFVSMESMGCTH 283
+ P+ YNTL++ GFC+ G +N A +F +M
Sbjct: 581 LKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKP 640
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEM 311
Y+++I+G+ + + A +LY E+
Sbjct: 641 NAAIYNLMIHGHSRGGNVHKAYNLYMEL 668
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 149/355 (41%), Gaps = 53/355 (14%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP V S++ + + + + + + G+ PD TY+ LI C ++
Sbjct: 446 RGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVE 505
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
F + ++R P+ VT+TSLI C + + +A L ++ G P+ TY+ LIN
Sbjct: 506 AFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLIN 565
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
GL + T V AK L L++ E PD VTY ++I
Sbjct: 566 GLNKKARTKV-----------------------AKRLLLKLFYEESVPDDVTYNTLIEN- 601
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C N++ +E + +G C G M+EA R+ M+Q +PNA
Sbjct: 602 CSNNEFKS-----VEGLVKG--------------FCMKGLMNEADRVFKTMLQRNHKPNA 642
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS-YSILINGYCKNKEIEGALSLYG 309
+YN ++ G G V++A L++ +E H+ F+ +++ + K EG
Sbjct: 643 AIYNLMIHGHSRGGNVHKAYNLYMELE-----HSSFACHTVAVIALVKALAREGMNDELS 697
Query: 310 EMLSKGIKP----DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+L ++ D + L V F+ ++ + EM +DG+ D + +
Sbjct: 698 RLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPDGGIHSS 752
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 125/402 (31%), Positives = 206/402 (51%), Gaps = 18/402 (4%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
+ P +F IL L ++ + L R+ G PD YN LI+ + K
Sbjct: 4 KSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQ 63
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
F L ++++ P VT+T+++ GLC R +A L ++R GC PN++TYN ++
Sbjct: 64 AFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVE 123
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFG--------VEGF-----VDKAKELFLQMKDENIN 177
GL A + EEMA G F ++G VD+A++ +M +
Sbjct: 124 GLCEERKLDEAKKMLEEMAV-RGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VT 179
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
PDVV+YT+VI G C + D + A +L +M ++G P+VVT++ ++D CK G+++ A L
Sbjct: 180 PDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGL 239
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
LD M+++G RPN YN+L+ G + +A+++ V ME G T V SY+ I+G CK
Sbjct: 240 LDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCK 299
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+ ++ A +++ M+ +G P+ Y+ L L + +++ A L ++ + D
Sbjct: 300 AERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILL 359
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILK-CELDIRAYNCLID 398
Y +DGLCK EA LF + K CE D+ YN ++D
Sbjct: 360 YTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLD 401
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 201/399 (50%), Gaps = 17/399 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N++ L + + D + + + G FPD+ TYN I CK RV
Sbjct: 113 PNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF 172
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R+ TP+ V++T++I GLC + A+ + ++ GC P+V TY++LI+G +
Sbjct: 173 LARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCK 229
Query: 135 TGHTIVALNLFEEMA------------SGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G A+ L + M S G G + KA+++ ++M+ PDVV+
Sbjct: 230 GGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVS 289
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y + I G C A +AK + M+++G PN +++++++ELCK ++D+A L++
Sbjct: 290 YNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAR 349
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS-MESMGCTHTVFSYSILINGYCKNKEI 301
+ + +Y L+DG C GR + A LF ++ C VF Y+++++ +CK ++I
Sbjct: 350 EKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQI 409
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ AL ++ +ML + +VV +N L L ++ A + M +G D TY T
Sbjct: 410 DKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTL 468
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+D +CK A+ELF C D+ Y+ LI GL
Sbjct: 469 VDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGL 507
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 158/332 (47%), Gaps = 54/332 (16%)
Query: 118 CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG-----------VEGFVDKAKE 166
C+P+ FT+ L+ GL R+ A L M E G + G+ KAK+
Sbjct: 6 CQPDAFTFAILLRGLCRSNQLEKARQLLGRMK----EMGCVPDDAIYNALISGY-SKAKD 60
Query: 167 ------LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+M + P VVTYT+++ G C A +A LL EM D+G PN+ T+NV
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 221 IMDELCKNGKMDEASRLLDLMIQIG--------------------------------VRP 248
I++ LC+ K+DEA ++L+ M G V P
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTP 180
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
+ Y T+++G C +G ++ A + M + GCT V +YS LI+G+CK E+E A+ L
Sbjct: 181 DVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLL 240
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
ML G +P++V YN+L L + + +A + EM+R G D +Y IDGLCK
Sbjct: 241 DSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKA 300
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +A +F + C + +Y+ L++ L
Sbjct: 301 ERVKKAKAVFDRMVERGCTPNASSYSMLVEEL 332
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 184/392 (46%), Gaps = 38/392 (9%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P P V S+ + L K+ D+ + ++ + G PD+ TY+ LI+ FCK G V
Sbjct: 177 PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERA 236
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
+L +L+ PN V + SL+ L I +A + ++ G P+V +YN I+G
Sbjct: 237 MGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDG 296
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
L + V KAK +F +M + P+ +Y+ ++ C
Sbjct: 297 LCKAER-----------------------VKKAKAVFDRMVERGCTPNASSYSMLVEELC 333
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA----SRLLDLMIQIGVR 247
+ ++A L+ + ++ +++ + V++D LCK G+ DEA S++LD I
Sbjct: 334 KKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKI---CE 390
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P+ F YN ++D C ++++A ++ M C + V +++IL++G C + + A ++
Sbjct: 391 PDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCCNVV-TWNILVHGLCVDDRLSDAETM 449
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
M+ +G PD V Y TL + + + A +LF+E + G D TY I GL
Sbjct: 450 LLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVH 509
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ EA LF +LD+ +N +I G
Sbjct: 510 ENMAEEAYLLFT-------KLDVALWNAMILG 534
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 183/398 (45%), Gaps = 33/398 (8%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M N R P V +++ L K + + L + G P++ YN L+
Sbjct: 204 MLDQMTN-RGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGAL 262
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
++G + +L + R FTP+ V++ + I GLC R+ +A A+F ++ GC PN
Sbjct: 263 HRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNA 322
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+Y+ L+ L + A+ L V++A+E + + D++
Sbjct: 323 SSYSMLVEELCKKKELDDAITL----------------VEQAREKYQIV-------DILL 359
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
YT ++ G C ++EA L +++D+ + +P+V +NV++D CK ++D+A ++ M
Sbjct: 360 YTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQM 419
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++ N +N L+ G C+ R++ A+ + ++M G +Y L++ CK +
Sbjct: 420 LERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKS 478
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
AL L+ E + G PDVV Y+ L L + E A+ LF ++ D +
Sbjct: 479 AAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL-------DVALWNAM 531
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I G +N ++LF L E + R + I G
Sbjct: 532 ILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISG 569
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 114/229 (49%), Gaps = 3/229 (1%)
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M D++ PD T+ ++RG C +N +A+ LL M + G P+ +N ++ K
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+A + L M++ P Y ++DG C GR A +L M GC+ +++Y++
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
++ G C+ ++++ A + EM +G PDVV YN+ L + +V+ A K M
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP--- 177
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
V D +Y T I+GLCK+ + A + + C D+ Y+ LIDG
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDG 226
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 104/195 (53%), Gaps = 3/195 (1%)
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M+D+ QP+ TF +++ LC++ ++++A +LL M ++G P+ +YN L+ G+
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
+A + M C TV +Y+ +++G CK + A+ L EM KG P++ YN
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
+ L E +++ A K+ +EM G D TY +FI GLCK + EA + + +
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTP 180
Query: 386 CELDIRAYNCLIDGL 400
D+ +Y +I+GL
Sbjct: 181 ---DVVSYTTVINGL 192
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 126/383 (32%), Positives = 198/383 (51%), Gaps = 15/383 (3%)
Query: 32 HYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 91
H+ +F+++ S GL P + T+N ++ CK GR + + P+ V+++
Sbjct: 349 HWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYS 408
Query: 92 SLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG 151
L+ G E R + LF + G N +N LI+ + G A+ +F EM G
Sbjct: 409 ILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEM-QG 467
Query: 152 NG-------------EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
G F G + A E F QM + P+ V Y S+I GFC D +
Sbjct: 468 QGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVK 527
Query: 199 AKCLLIEMMDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
AK L+ EMM +G+ +PN+V F+ I+ LC G++ +A + +L+I IG RP +N+L+
Sbjct: 528 AKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLI 587
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
DG+CL G++ +A + +M S+G V +Y+ L++GYCK+ +I+ L L+ EML K +K
Sbjct: 588 DGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVK 647
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
P V Y+ + LF + A K+F EM G A D TY+ + GLC+N EA+ L
Sbjct: 648 PTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITL 707
Query: 378 FRTLRILKCELDIRAYNCLIDGL 400
F L + C+ DI N +I+ L
Sbjct: 708 FHKLGAMDCKFDITILNTVINAL 730
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 189/382 (49%), Gaps = 15/382 (3%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R +P V ++ IL C + + D + F RL GL N + C C R
Sbjct: 150 RVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDE 209
Query: 71 GF-VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG--CEPNVFTYNT 127
V+L R+ PNA+++ ++IK LC +SR EA + ++ G C P+V ++NT
Sbjct: 210 AVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNT 269
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDEN 175
+I+G ++ G A NL EM E V + +DKA+ + QM D+
Sbjct: 270 VIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKG 329
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+ PD +TYT++I G+ + W E+ + +M +G+ P +VTFN M LCK+G+ +A
Sbjct: 330 VEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAE 389
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+ M G P+ Y+ L+ G+ GR LF SM G ++ILI+ +
Sbjct: 390 EIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAH 449
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
K ++ A+ ++ EM +G++PDVV Y+TL + ++ A + F +M G+ +T
Sbjct: 450 AKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNT 509
Query: 356 WTYRTFIDGLCKNSYIVEAVEL 377
Y + I G C + +V+A EL
Sbjct: 510 VVYHSLIHGFCMHGDLVKAKEL 531
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 194/408 (47%), Gaps = 14/408 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF YM + P + S++IL A + + +LF + G+ + + +NILI+
Sbjct: 391 IFQYM-TTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAH 449
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K G + +V + P+ VT+++LI C R+ +A F+++ G EPN
Sbjct: 450 AKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNT 509
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN-------------GEFGVEGFVDKAKELFL 169
Y++LI+G G + A L EM S EG V A ++F
Sbjct: 510 VVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFN 569
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+ P +VT+ S+I G+C +A +L M+ G++P+VVT+N ++ CK+G
Sbjct: 570 LVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSG 629
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+D+ L M+ V+P Y+ ++DG GR + AK++F M G + +Y
Sbjct: 630 KIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYK 689
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
IL+ G C+N + A++L+ ++ + K D+ I NT+ L+++ + E A LF +
Sbjct: 690 ILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTS 749
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
G+ + TY I L K + EA +F ++ C R N +I
Sbjct: 750 GLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDII 797
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 172/368 (46%), Gaps = 13/368 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FNIL AK D + +F + G+ PD+ TY+ LI+ FC+MGR++ +++
Sbjct: 442 FNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMI 501
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC-EPNVFTYNTLINGLYRTGHT 138
PN V + SLI G C +++A L +++ G PN+ ++++I+ L G
Sbjct: 502 SIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRV 561
Query: 139 IVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
+ A ++F + + + G ++KA + M I PDVVTY ++
Sbjct: 562 MDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTL 621
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
+ G+C + ++ L EM+ + V+P VT+++++D L G+ A ++ MI G
Sbjct: 622 VSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGT 681
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+ Y L+ G C + A LF + +M C + + +IN K + E A
Sbjct: 682 AVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEAND 741
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L+ + + G+ P+V Y + L + VE A +F M++ G A + I L
Sbjct: 742 LFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLL 801
Query: 367 KNSYIVEA 374
+ IV+A
Sbjct: 802 QKGDIVKA 809
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 110/263 (41%), Gaps = 12/263 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +FN L + + + S G+ PD+ TYN L++ +CK G++ G ++
Sbjct: 578 PTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLIL 637
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+L P VT++ ++ GL R A +F ++ G ++ TY L+ GL R
Sbjct: 638 FREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCR 697
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
T A+ LF ++ + + +F + ++A +LF + + P+V T
Sbjct: 698 NDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVST 757
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I EA + M G P+ N I+ L + G + +A + +
Sbjct: 758 YGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVD 817
Query: 243 QIGVRPNAFVYNTLMDGFCLTGR 265
+ A + LM F G+
Sbjct: 818 GTIISLEASTTSLLMSLFSSKGK 840
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 89/243 (36%), Gaps = 23/243 (9%)
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL--------CKN 228
+P V ++ R ++A L E++ QG + N + L C N
Sbjct: 71 DPQVAFVAAIARVRAGTFSTDDAHHLFDELLRQGTPVHNPALNGFLAALARAPDSVSCSN 130
Query: 229 GKMDEASRLLDLMIQI-------GVRP-NAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
G + +L L +I V P + Y LMD C R + F + G
Sbjct: 131 G----PALVLALFNRICREEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAG 186
Query: 281 CTHTVFSYSILINGYCKNKEIEGALS-LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
+ + C K + A+ L M G P+ + YNT+ L + + A
Sbjct: 187 LRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEA 246
Query: 340 FKLFDEMQRDG--VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ M ++G + D ++ T I G K + +A L + E D+ YN ++
Sbjct: 247 LDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIV 306
Query: 398 DGL 400
D L
Sbjct: 307 DAL 309
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 203/387 (52%), Gaps = 28/387 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N++ K + LS+ R++ + PD+ TYN ++ C G++ V
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 75 LGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
L R+L R C+ P+ +T+T LI+ C +S + A L ++R GC P+V TYN L+NG+
Sbjct: 227 LDRMLQRDCY-PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ EG +D+A + M P+V+T+ ++R C
Sbjct: 286 K-----------------------EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
W +A+ LL +M+ +G P+VVTFN++++ LC+ G + A +L+ M Q G +PN+ Y
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N L+ GFC +++RA E M S GC + +Y+ ++ CK+ ++E A+ + ++ S
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG P ++ YNT+ L + + +A KL DEM+ + DT TY + + GL + + E
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A++ F + + +N ++ GL
Sbjct: 503 AIKFFHEFERMGIRPNAVTFNSIMLGL 529
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 194/415 (46%), Gaps = 52/415 (12%)
Query: 30 NKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVT 89
N HY +V NS+ D+ + N L + G + GF L ++ P+ +
Sbjct: 88 NGHYSSV-------NSSFALEDVESNNHLRQ-MVRTGELEEGFKFLENMVYHGNVPDIIP 139
Query: 90 FTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
T+LI+G C + +AA + L G P+V TYN +I+G + G AL++ + M+
Sbjct: 140 CTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS 199
Query: 150 SGNG---------EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
G + +A E+ +M + PDV+TYT +I C + A
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
LL EM D+G P+VVT+NV+++ +CK G++DEA + L+ M G +PN +N ++
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 261 CLTGR-----------------------------------VNRAKELFVSMESMGCTHTV 285
C TGR + RA ++ M GC
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
SY+ L++G+CK K+++ A+ M+S+G PD+V YNT+ L + +VE A ++ ++
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ G + TY T IDGL K +A++L +R + D Y+ L+ GL
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 177/379 (46%), Gaps = 12/379 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + L + + + R+ +PD+ TY ILI C+ V H +
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + TP+ VT+ L+ G+C E R+ EA + GC+PNV T+N ++ +
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
TG + A L +M V +G + +A ++ +M P+ ++
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++ GFC + A L M+ +G P++VT+N ++ LCK+GK+++A +L+ +
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS 441
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G P YNT++DG G+ +A +L M + +YS L+ G + +++
Sbjct: 442 SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVD 501
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ + E GI+P+ V +N++ + L + Q +RA M G + +Y I
Sbjct: 502 EAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561
Query: 363 DGLCKNSYIVEAVELFRTL 381
+GL EA+EL L
Sbjct: 562 EGLAYEGMAKEALELLNEL 580
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 173/361 (47%), Gaps = 13/361 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D ML R P V ++ IL ++ + L + G PD+ TYN+L+N
Sbjct: 226 VLDRMLQ-RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 284
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK GR+ L + S PN +T +++ +C+ R M+A L + G P+V
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQ 170
T+N LIN L R G A+++ E+M + F E +D+A E +
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M PD+VTY +++ C +A +L ++ +G P ++T+N ++D L K GK
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+A +LLD M ++P+ Y++L+ G G+V+ A + F E MG +++
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
++ G CK+++ + A+ M+++G KP+ Y L L + A +L +E+ G
Sbjct: 525 IMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Query: 351 V 351
+
Sbjct: 585 L 585
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 126/435 (28%), Positives = 215/435 (49%), Gaps = 50/435 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N++ L K + D + +++ + G PD TYN +I+ + +GR+ +
Sbjct: 298 PDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKM 357
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ PN V S + LC R EAA +F + G +P++ +Y TL++G
Sbjct: 358 FRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYAS 417
Query: 135 TGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDVV 181
G + LF M S NG + G VD A +F +M+ + ++PDVV
Sbjct: 418 EGWFADMIGLFNSMKS-NGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVV 476
Query: 182 TYT-----------------------------------SVIRGFCYANDWNEAKCLLIEM 206
TY+ S+I+GFC +AK L+ EM
Sbjct: 477 TYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEM 536
Query: 207 MDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
+++G+ +P++V FN +++ LCK+G++ +A + DL+ IG RP+ + +L+DG+CL G+
Sbjct: 537 INKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGK 596
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
+++A ++ +ME +G + +YS L++GY KN I L+L+ EM KG+KP+ V Y
Sbjct: 597 MDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGI 656
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
+ LF + A K F EM G Y + GLC+N+ EA+ LF+ L +
Sbjct: 657 MLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMN 716
Query: 386 CELDIRAYNCLIDGL 400
+ I N +I+ +
Sbjct: 717 VKFSITILNTMINAM 731
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 201/425 (47%), Gaps = 29/425 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDT--------VLSLFKRLNSTGLFP---- 50
+FD + + +P P S N LA+ L+LF R+ P
Sbjct: 96 MFDELFR-QATPVPGRSLNGFLTALARATSSSACITDGPALALALFNRVCREQAGPRVVP 154
Query: 51 -DLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA-A 108
++TY+IL++C C+ R G V+ G ILR+ + +T ++L+K LC +R EA
Sbjct: 155 LTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNV 214
Query: 109 LFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE-------------- 154
L ++ GC PNVF+Y+ ++ GL + AL+LF+ MA G
Sbjct: 215 LLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHG 274
Query: 155 FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
F EG KA LF +M + + PDVVTY +I C A ++A+ +L +M G QP+
Sbjct: 275 FFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPD 334
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
VT+N ++ G++ EA+++ M G+ PN + N+ + C GR A E+F
Sbjct: 335 TVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFD 394
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
SM + G + SY L++GY + L+ M S GI D ++N L +
Sbjct: 395 SMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRG 454
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
V+ A +F EMQ+ GV+ D TY T I + + +A+E F + + + Y+
Sbjct: 455 MVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYH 514
Query: 395 CLIDG 399
+I G
Sbjct: 515 SIIQG 519
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 118/382 (30%), Positives = 185/382 (48%), Gaps = 15/382 (3%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V +++IL C + + D L LF + TGL T + L+ C C R
Sbjct: 151 RVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEE 210
Query: 71 GF-VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG--CEPNVFTYNT 127
V+L R+ PN +++ ++KGLC S A LF + G C PNV YNT
Sbjct: 211 AVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNT 270
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDEN 175
+I+G ++ G T A +LF EM + V + +DKA+ + QM
Sbjct: 271 VIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNG 330
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
PD VTY +I G+ EA + +M +G+ PN+V N + LCK+G+ EA+
Sbjct: 331 AQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAA 390
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+ D M G +P+ Y TL+ G+ G LF SM+S G ++ILI+ Y
Sbjct: 391 EIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAY 450
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
K ++ A+ ++ EM +G+ PDVV Y+T+ + ++ A + F++M G+ +T
Sbjct: 451 AKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNT 510
Query: 356 WTYRTFIDGLCKNSYIVEAVEL 377
Y + I G C + +V+A EL
Sbjct: 511 AVYHSIIQGFCMHGGLVKAKEL 532
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 189/392 (48%), Gaps = 14/392 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IFD M + P + S+ L A + ++ LF + S G+ D +NILI+ +
Sbjct: 392 IFDSM-TAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAY 450
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K G V ++ + + +P+ VT++++I R+ +A F ++ G +PN
Sbjct: 451 AKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNT 510
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN-------------GEFGVEGFVDKAKELFL 169
Y+++I G G + A L EM + +G V A ++F
Sbjct: 511 AVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFD 570
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+ D PDV+T+TS+I G+C ++A +L M GV+ ++VT++ ++D KNG
Sbjct: 571 LVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNG 630
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
++++ L M + GV+PN Y ++ G GR A++ F M G T TV Y
Sbjct: 631 RINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYG 690
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
I++ G C+N + A+ L+ ++ + +K + I NT+ ++++ + E A +LF +
Sbjct: 691 IILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISAS 750
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
G+ + TY I L K+ + +A +F ++
Sbjct: 751 GLLPNESTYGVMIINLLKDGAVEDANNMFSSM 782
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 178/372 (47%), Gaps = 21/372 (5%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FNIL AK D + +F + G+ PD+ TY+ +I+ F +MGR++ +++
Sbjct: 443 FNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMV 502
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC-EPNVFTYNTLINGLYRTGHT 138
PN + S+I+G C +++A L +++ G P++ +N++IN L + G
Sbjct: 503 ARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRV 562
Query: 139 IVALNLFEEMASGNGE-------------FGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
+ A ++F+ + + GE + + G +DKA ++ M+ + D+VTY++
Sbjct: 563 MDAHDIFD-LVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYST 621
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
++ G+ N+ L EM +GV+PN VT+ +++ L + G+ A + MI+ G
Sbjct: 622 LLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESG 681
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL---INGYCKNKEIE 302
+Y ++ G C R N A E + + +G + FS +IL IN K + E
Sbjct: 682 TTVTVSIYGIILGGLC---RNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKE 738
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ + + G+ P+ Y + + L + VE A +F M++ G+ + I
Sbjct: 739 EAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRII 798
Query: 363 DGLCKNSYIVEA 374
L + I +A
Sbjct: 799 RMLLEKGEIAKA 810
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 74/189 (39%), Gaps = 38/189 (20%)
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
V T++++MD C+ + D L +++ G++ + +TL+ C R A + +
Sbjct: 157 VHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLL 216
Query: 275 S-MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
M +GC VFSYSI++ G C N
Sbjct: 217 HRMSELGCVPNVFSYSIILKGLCDNS---------------------------------- 242
Query: 334 HQVERAFKLFDEMQRDGVA--ADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIR 391
+RA LF M ++G A + Y T I G K +A LF + + D+
Sbjct: 243 -MSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVV 301
Query: 392 AYNCLIDGL 400
YN +ID L
Sbjct: 302 TYNLIIDAL 310
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 54/132 (40%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V + I+ G L +N D + LF++L + + + N +IN K+ R +
Sbjct: 686 VSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFA 745
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
I S PN T+ +I L + + +A +F+ + G P N +I L G
Sbjct: 746 TISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKG 805
Query: 137 HTIVALNLFEEM 148
A N ++
Sbjct: 806 EIAKAGNYLSKV 817
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 195/385 (50%), Gaps = 24/385 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ L K + + L + G+ P YN +I C GRV V
Sbjct: 31 PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 90
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R C P+ +T+T L+ LC +RI +A+ + + GC PNV TYNTLING +
Sbjct: 91 YRDMQRHC-APSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCK 149
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G+ +D+A LF QM + + +PDV TY +I G+C
Sbjct: 150 LGN-----------------------MDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQE 186
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ LL EM+ G +PN +T+N +MD L K+GK +A L +M++ +P+ F +N
Sbjct: 187 RPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFN 246
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
++D FC G+++ A ELF M GC +++Y+I+I+G C+ I+ A L M
Sbjct: 247 LMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEA 306
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G PDVV YN++ L + QV+ A+++++ ++ G D T T IDGLCK+ + +A
Sbjct: 307 GCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDA 366
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+L R + D+ AY LI G
Sbjct: 367 EKLLREMERNGSAPDVVAYTILIHG 391
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/353 (33%), Positives = 185/353 (52%), Gaps = 12/353 (3%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V ++ IL L K+ + + + G P++ TYN LIN FCK+G +
Sbjct: 96 RHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDE 155
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
V+ ++L + +P+ T+ LI G C + R + A L ++ +GCEPN TYNTL++
Sbjct: 156 AVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMD 215
Query: 131 GLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINP 178
L ++G I A NL + M + + F G +D A ELF M D P
Sbjct: 216 SLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLP 275
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D+ TY +I G C AN ++A+ LL M + G P+VVT+N I+ LCK ++DEA +
Sbjct: 276 DIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVY 335
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
+++ G + +TL+DG C + R++ A++L ME G V +Y+ILI+G+CK
Sbjct: 336 EVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKA 395
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
+++ +L+ + EML KG P V+ Y+ + L + +V L M GV
Sbjct: 396 DQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 125/240 (52%), Gaps = 23/240 (9%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ R P +FN++ K D LF+ + G PD+YTYNI+I+ C+
Sbjct: 232 MMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRAN 291
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
R+ +L R+ + P+ VT+ S++ GLC S++ EA ++ LR G +V T +
Sbjct: 292 RIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCS 351
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
TLI+GL ++ +D A++L +M+ PDVV YT +
Sbjct: 352 TLIDGLCKSRR-----------------------LDDAEKLLREMERNGSAPDVVAYTIL 388
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I GFC A+ +++ EM+D+G P V+T+++++D+LCK+ ++ + LL M++ GV
Sbjct: 389 IHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 132/435 (30%), Positives = 213/435 (48%), Gaps = 50/435 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ L K + D + +++ S G PD TYN +I+ + +G+ +
Sbjct: 260 PDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGM 319
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R P+ T S + LC + EAA F + G +P++ TY+ L++G
Sbjct: 320 FREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAA 379
Query: 135 TGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENI----- 176
G+ + LNLF M GNG +G G +D+A +F QM++ +
Sbjct: 380 EGYVVDMLNLFNSM-EGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAW 438
Query: 177 ------------------------------NPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
PD + Y S+I+GFC + +AK L+ EM
Sbjct: 439 TYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEM 498
Query: 207 MDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M +G+ +PN V FN I++ LCK G++ EA + DL+I IG RP+ +N+L+DG+ L G+
Sbjct: 499 MSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGK 558
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
+ +A + +M S+G V +YS L++GYC+N I+ L L+ EMLSKG+KP + Y
Sbjct: 559 MEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGI 618
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
+ LF + A K+ EM G D T + GLC+N+ EA+ LF+ L +
Sbjct: 619 ILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMN 678
Query: 386 CELDIRAYNCLIDGL 400
+ +I N +ID +
Sbjct: 679 VKFNIAIINTMIDAM 693
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 185/386 (47%), Gaps = 15/386 (3%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R + P VC++NIL C + +LF R TGL D+ NIL+ C C R
Sbjct: 113 RVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDD 172
Query: 71 GF-VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGCEPNVFTYNT 127
V+L R+ P+ +++++++K LC +SR A L + + GC PNV +YNT
Sbjct: 173 AVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNT 232
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDEN 175
+I+G +R G A NLF EM V + +DKA+ + QM
Sbjct: 233 VIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNG 292
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
PD VTY +I G+ W E + EM +G+ P++ T N M LCK+GK EA+
Sbjct: 293 FEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAA 352
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
D M G +P+ Y+ L+ G+ G V LF SME G Y+ILI+ Y
Sbjct: 353 EFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAY 412
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
K ++ A+ ++ +M +G+ PD Y T+ + ++ A F++M G+ DT
Sbjct: 413 GKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDT 472
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTL 381
Y + I G C + +V+A EL +
Sbjct: 473 IVYNSLIQGFCMHGNLVKAKELISEM 498
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 185/379 (48%), Gaps = 24/379 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+NIL K D + +F ++ G+ PD +TY +I F +MGR++ +++
Sbjct: 405 YNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMI 464
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC-EPNVFTYNTLINGLYRTGHT 138
P+ + + SLI+G C +++A L +++ G PN +N++IN L + G
Sbjct: 465 AMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRV 524
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+ A ++F+ L + + + PDV+T+ S+I G+ +
Sbjct: 525 VEAQDIFD--------------------LVIHIGER---PDVITFNSLIDGYGLVGKMEK 561
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A +L M+ G++P+VVT++ ++D C+NG++D+ L M+ GV+P Y ++
Sbjct: 562 AFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILH 621
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G GR AK++ M G T + + I++ G C+N + A++L+ ++ + +K
Sbjct: 622 GLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKF 681
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
++ I NT+ ++++ + E A +LFD + G+ + TY I L K + EA +F
Sbjct: 682 NIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMF 741
Query: 379 RTLRILKCELDIRAYNCLI 397
+ C R N +I
Sbjct: 742 SLMEKSGCAPSSRLLNNII 760
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 59/132 (44%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ + I+ G L +N D ++LFK+L + + ++ N +I+ K+ + +
Sbjct: 648 ISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFD 707
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
I + PNA T+ +I L E + EA +F+ + GC P+ N +I L G
Sbjct: 708 SISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKG 767
Query: 137 HTIVALNLFEEM 148
A N ++
Sbjct: 768 EISKAGNYLSKV 779
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 204/387 (52%), Gaps = 28/387 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N++ K + LS+ R++ + PD+ TYN ++ C G++ V
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 75 LGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
L R+L R C+ P+ +T+T LI+ C +S + +A L ++R GC P+V TYN L+NG+
Sbjct: 227 LDRMLQRDCY-PDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ EG +D+A + M P+V+T+ ++R C
Sbjct: 286 K-----------------------EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
W +A+ LL +M+ +G P+VVTFN++++ LC+ G + A +L+ M + G +PN+ Y
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSY 382
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N L+ GFC +++RA E M S GC + +Y+ ++ CK+ ++E A+ + ++ S
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG P ++ YNT+ L + + +A KL DEM+ + DT TY + + GL + + E
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A++ F + + +N ++ GL
Sbjct: 503 AIKFFHEFERMGVRPNAVTFNSIMLGL 529
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 184/358 (51%), Gaps = 26/358 (7%)
Query: 43 LNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 102
L +G PD+ TYN++I+ +CK G +++ VL R+ +P+ VT+ ++++ LC +
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVD 162
+ +A + ++ C P+V TY LI R + V
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCR-----------------------DSGVG 256
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
+A +L +M+D PDVVTY ++ G C +EA L +M G QPNV+T N+I+
Sbjct: 257 QAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
+C G+ +A +LL M++ G P+ +N L++ C G + RA ++ M GC
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQ 376
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
SY+ L++G+CK K+++ A+ M+S+G PD+V YNT+ L + +VE A ++
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+++ G + TY T IDGL K +A++L +R + D Y+ L+ GL
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 175/379 (46%), Gaps = 12/379 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + L + + + R+ +PD+ TY ILI C+ V +
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKL 261
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + TP+ VT+ L+ G+C E R+ EA + GC+PNV T+N ++ +
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
TG + A L +M V +G + +A ++ +M P+ ++
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLS 381
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++ GFC + A L M+ +G P++VT+N ++ LCK+GK+++A +L+ +
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS 441
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G P YNT++DG G+ +A +L M + +YS L+ G + +++
Sbjct: 442 SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVD 501
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ + E G++P+ V +N++ + L + Q +RA M G +Y I
Sbjct: 502 EAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILI 561
Query: 363 DGLCKNSYIVEAVELFRTL 381
+GL EA+EL L
Sbjct: 562 EGLAYEGMAKEALELLNEL 580
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 163/326 (50%), Gaps = 13/326 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M + R P V ++N+L + K D + + S+G P++ T+NI++
Sbjct: 261 LLDEMRD-RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C GR +L +LR F+P+ VTF LI LC + + A + K+ GC+PN
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNS 379
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
+YN L++G + A+ E M S +G V+ A E+ Q
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ + +P ++TY +VI G A +A LL EM + ++P+ +T++ ++ L + GK
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+DEA + ++GVRPNA +N++M G C T + +RA + V M + GC T SY+I
Sbjct: 500 VDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTI 559
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGI 316
LI G + AL L E+ +KG+
Sbjct: 560 LIEGLAYEGMAKEALELLNELCNKGL 585
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 171/361 (47%), Gaps = 13/361 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D ML R P V ++ IL ++ + L + G PD+ TYN+L+N
Sbjct: 226 VLDRMLQ-RDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGI 284
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK GR+ L + S PN +T +++ +C+ R M+A L + G P+V
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQ 170
T+N LIN L R G A+++ E+M + F E +D+A E +
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M PD+VTY +++ C +A +L ++ +G P ++T+N ++D L K GK
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+A +LLD M ++P+ Y++L+ G G+V+ A + F E MG +++
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNS 524
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
++ G CK ++ + A+ M+++G KP Y L L + A +L +E+ G
Sbjct: 525 IMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Query: 351 V 351
+
Sbjct: 585 L 585
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 120/254 (47%), Gaps = 32/254 (12%)
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLL-------------------------------IEM 206
PD++ T++IRGFC +A +L + +
Sbjct: 135 PDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 207 MDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
+D+ V P+VVT+N I+ LC +GK+ +A +LD M+Q P+ Y L++ C
Sbjct: 195 LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSG 254
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
V +A +L M GCT V +Y++L+NG CK ++ A+ +M S G +P+V+ +N
Sbjct: 255 VGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
+ + + A KL +M R G + T+ I+ LC+ + A+++ +
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHG 374
Query: 386 CELDIRAYNCLIDG 399
C+ + +YN L+ G
Sbjct: 375 CQPNSLSYNPLLHG 388
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 101/185 (54%), Gaps = 3/185 (1%)
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
V N + +L + G+++E + L+ M+ G P+ TL+ GFC G+ +A ++
Sbjct: 103 VESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEV 162
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
+E G V +Y+++I+GYCK EI ALS+ M + PDVV YNT+ L + +
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
+++A ++ D M + D TY I+ C++S + +A++L +R C D+ YN
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNV 279
Query: 396 LIDGL 400
L++G+
Sbjct: 280 LVNGI 284
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 126/435 (28%), Positives = 215/435 (49%), Gaps = 50/435 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N++ L K + D + +++ + G PD TY+ +I+ + +GR+ +
Sbjct: 298 PDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKM 357
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + PN VT S + LC R EAA F + G +P++F+Y TL++G
Sbjct: 358 FREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYAS 417
Query: 135 TGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDVV 181
G + LF M S NG + G VD A +F +M+ + ++PDVV
Sbjct: 418 EGCFADMIGLFNSMKS-NGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVV 476
Query: 182 TYT-----------------------------------SVIRGFCYANDWNEAKCLLIEM 206
TY+ S+I+GFC +AK L+ EM
Sbjct: 477 TYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEM 536
Query: 207 MDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
+++G+ +P++V F+ +++ LCK+G++ +A + DL IG RP +N+L+DG+CL G+
Sbjct: 537 INKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGK 596
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
+++A ++ +ME +G + +Y+ L++GY KN I L+L+ EM KG+KP+ V Y
Sbjct: 597 MDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGI 656
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
+ LF + A K F EM G Y + GLC+N+ EA+ LF+ L +
Sbjct: 657 MLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMN 716
Query: 386 CELDIRAYNCLIDGL 400
+ I N +I+ +
Sbjct: 717 VKFSITILNTMINAM 731
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 121/378 (32%), Positives = 188/378 (49%), Gaps = 15/378 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF-V 73
P C++NIL C + + D L+LF + TGL D T N L+ C C R V
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG--CEPNVFTYNTLING 131
+L R+ PNAV+++ ++K LC S A L + G C P+V Y+T+I+G
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHG 274
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPD 179
+ G T A +LF EM + V + +DKA+ + QM + PD
Sbjct: 275 FFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPD 334
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
VTY+ +I G+ EA + EM +G+ PN+VT N + LCK+G+ EA+ D
Sbjct: 335 TVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFD 394
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M G +P+ F Y TL+ G+ G LF SM+S G ++ILI+ Y K
Sbjct: 395 SMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRG 454
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++ A+ ++ EM +G+ PDVV Y+T+ + ++ A + F++M G+ +T Y
Sbjct: 455 MVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYS 514
Query: 360 TFIDGLCKNSYIVEAVEL 377
+ I G C + +V+A EL
Sbjct: 515 SIIQGFCMHGGLVKAKEL 532
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 183/363 (50%), Gaps = 24/363 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F IL AK D + +F + G+ PD+ TY+ +I+ F +MGR++ +++
Sbjct: 443 FTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMV 502
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC-EPNVFTYNTLINGLYRTGHT 138
PN ++S+I+G C +++A L +++ G P++ ++++IN L + G
Sbjct: 503 ARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRV 562
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+ A ++F+ +A+ GE P V+T+ S+I G+C ++
Sbjct: 563 MDAHDIFD-LATDIGE----------------------RPGVITFNSLIDGYCLVGKMDK 599
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A +L M GV+P++VT+N ++D KNG++++ L M + GV+PN Y ++
Sbjct: 600 AFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLA 659
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G GR A++ F M G T TV Y I++ G C+N + A+ L+ ++ + +K
Sbjct: 660 GLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKF 719
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
+ I NT+ ++++ + E A +LF + G+ + TY I L K+ + +A +F
Sbjct: 720 SITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMF 779
Query: 379 RTL 381
++
Sbjct: 780 SSM 782
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 77/199 (38%), Gaps = 38/199 (19%)
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
E Q P T+N++MD C+ + D L +++ G++ + NTL+ C
Sbjct: 147 EAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYAN 206
Query: 265 RVNRAKELFVS-MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG--IKPDVV 321
R A + + M +GC SYSI++ C N + AL L M +G PDVV
Sbjct: 207 RTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVV 266
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
Y+T+ F + +A LF EM R GV D T
Sbjct: 267 AYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVT------------------------ 302
Query: 382 RILKCELDIRAYNCLIDGL 400
YN +ID L
Sbjct: 303 -----------YNLIIDAL 310
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 54/132 (40%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V + I+ G L +N D + LF++L + + + N +IN K+ R +
Sbjct: 686 VSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFA 745
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
I S PN T+ +I L + + +A +F+ + G P N +I L G
Sbjct: 746 TISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKG 805
Query: 137 HTIVALNLFEEM 148
A N ++
Sbjct: 806 EIAKAGNYLSKV 817
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/386 (32%), Positives = 201/386 (52%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ +L L K LF + G+ PD+ Y I+++ + G +S
Sbjct: 307 PDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSF 366
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ + +PN F + ++ I EA +F K+R G PNV Y TLI+ L +
Sbjct: 367 LDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCK 426
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G VD A+ F QM +E + P++V +TS++ G C +
Sbjct: 427 LGR-----------------------VDDAELKFNQMINEGVAPNIVVFTSLVYGLCTID 463
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
W +A L EM++QG+ PNVV FN IM LC G++ +A RL+DLM ++G RP+ YN
Sbjct: 464 KWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYN 523
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ G CL G+ + A +L M S+G +Y+ L++GYC++ I+ A S++ EMLS
Sbjct: 524 ALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSN 583
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
GI P VV YNT+ LF+ + A +L+ M G +TY ++GL KN+ + EA
Sbjct: 584 GITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEA 643
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+++F++L ++DI +N +I L
Sbjct: 644 LKMFQSLCSKDLQVDIITFNIMIGAL 669
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 140/425 (32%), Positives = 212/425 (49%), Gaps = 29/425 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHY------DTVLSLFKRLNS---TGLFPDLY 53
+FD L+ P + +FN L ++ + V+S F R+ + + PD++
Sbjct: 37 LFDEFLH-HARPASIIAFNQLLAAVSSASRRGSSSTSELVVSCFNRMIRDCCSKVAPDVF 95
Query: 54 TYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTS-LIKGLCAESRIMEA-AALFT 111
TY+IL+ CFC+MGR+ HGF G IL++ + N V + L+KGLC R+ EA L
Sbjct: 96 TYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMGVLLR 155
Query: 112 KLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG----------------NGEF 155
++ GC PNV +YNTL+ G AL L MA G NG F
Sbjct: 156 RMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVING-F 214
Query: 156 GVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNV 215
EG VDKA LFL M D+ I P+VVTYT VI G C A + A+ + +M+D+GV+PN+
Sbjct: 215 FTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNI 274
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
VT+ ++ G+ E R+L M G+ P+ F Y L+D C G+ A++LF S
Sbjct: 275 VTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDS 334
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
M G V Y I+++GY + S M+ GI P+ I+N +F +
Sbjct: 335 MIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAM 394
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
+ A +F++M++ G++ + Y T ID LCK + +A F + +I +
Sbjct: 395 IGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTS 454
Query: 396 LIDGL 400
L+ GL
Sbjct: 455 LVYGL 459
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 185/367 (50%), Gaps = 23/367 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FNI+F AK + +F ++ GL P++ Y LI+ CK+GRV + +++
Sbjct: 382 FNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMI 441
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
PN V FTSL+ GLC + +A LF ++ G PNV +NT++ L
Sbjct: 442 NEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLC------ 495
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
EG V KA+ L M+ PD+++Y ++IRG C +EA
Sbjct: 496 -----------------TEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEA 538
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
LL M+ G++PN T+N ++ C++G++D+A + M+ G+ P YNT++ G
Sbjct: 539 SKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHG 598
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
T R + AKEL+++M + G ++++Y+I++NG KN ++ AL ++ + SK ++ D
Sbjct: 599 LFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVD 658
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
++ +N + L + + E A LF + +G+ D TYR + L + + E +F
Sbjct: 659 IITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFS 718
Query: 380 TLRILKC 386
+ C
Sbjct: 719 EMEKSGC 725
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 137/303 (45%), Gaps = 12/303 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V FN + L L + G PD+ +YN LI C +G+ +
Sbjct: 482 PNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKL 541
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L PN T+ +L+ G C + RI +A ++F ++ G P V TYNT+++GL++
Sbjct: 542 LDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFK 601
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
T A L+ M + ++ + + VD+A ++F + +++ D++T
Sbjct: 602 TRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIIT 661
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ +I +A L + G+ P+V T+ +I + L + G ++E + M
Sbjct: 662 FNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEME 721
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G PN+ + N L+ L G ++RA ++ + + S+LI+ + + +
Sbjct: 722 KSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFSREEHQA 781
Query: 303 GAL 305
+L
Sbjct: 782 KSL 784
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/399 (34%), Positives = 201/399 (50%), Gaps = 19/399 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L K D L +F G PD+ TYN LIN FCK ++ +
Sbjct: 43 PDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRI 102
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R++ P+ VT+ SL+ GLC R+ EA L G PNV TY+TLI+GL R
Sbjct: 103 LQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVDK---GFSPNVITYSTLISGLCR 159
Query: 135 TGHTIV-ALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVV 181
+ AL LF + E V E V++A ELF + + PD +
Sbjct: 160 ELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAI 219
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT I G C A +A +L +M ++G P+VV+ N +++ LCK ++DEA LL M
Sbjct: 220 TYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGM 279
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE- 300
G PNA +NTL+ G C G+ +A F M G TV +Y+IL++G CK ++
Sbjct: 280 EAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQE 339
Query: 301 --IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
I+ A++L+ M+ KG PDVV Y+ L L + +++ A +L M+ G + +TY
Sbjct: 340 GRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTY 399
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ I GLC + EA+ELF + C D Y +I
Sbjct: 400 NSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 120/390 (30%), Positives = 193/390 (49%), Gaps = 30/390 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L L +L++R+ G PD+ TYN L++ FCK+G + +
Sbjct: 8 PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKI 67
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ F P+ VT+ +LI G C ++ EA + ++ P+V TYN+L+NGL +
Sbjct: 68 FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCK 127
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA- 193
G VD+A+ L + D+ +P+V+TY+++I G C
Sbjct: 128 NGR-----------------------VDEARMLIV---DKGFSPNVITYSTLISGLCREL 161
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+EA L ++ QG +P V T+N+++D L K +++EA L +++ G+ P+A Y
Sbjct: 162 RGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITY 221
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
+DG C GRV A + M+ GC V S++ +ING CK K ++ A L M +
Sbjct: 222 TVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEA 281
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK---NSY 370
KG P+ + +NTL + ++A F EM + GV TY +DGLCK
Sbjct: 282 KGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGR 341
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I EA+ LF + D+ Y+ LIDGL
Sbjct: 342 IKEAITLFDAMIEKGRVPDVVTYSALIDGL 371
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 152/289 (52%), Gaps = 27/289 (9%)
Query: 113 LRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMK 172
+R G PN TYN L++GL G A L+E M
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKA--------------------- 39
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 232
+PDVVTY +++ GFC + +EA + + +G P+VVT+N +++ CK K+D
Sbjct: 40 --GYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLD 97
Query: 233 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
EA R+L M+ + P+ YN+L++G C GRV+ A+ L V G + V +YS LI
Sbjct: 98 EAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIV---DKGFSPNVITYSTLI 154
Query: 293 NGYCKN-KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
+G C+ + + AL L+G +L +G +P+V YN L L + +V AF+LF + + G+
Sbjct: 155 SGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGL 214
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D TY FIDGLCK + +A+ + + + C D+ ++N +I+GL
Sbjct: 215 EPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGL 263
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 137/282 (48%), Gaps = 26/282 (9%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++NIL L K + LF L GL PD TY + I+ CK GRV ++
Sbjct: 181 PEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLM 240
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P+ V+ ++I GLC E R+ EA L + + GC PN ++NTLI G R
Sbjct: 241 LKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCR 300
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G A+ F+EM + P VVTY ++ G C A
Sbjct: 301 AGKWKKAMTTFKEMLK-----------------------RGVKPTVVTYNILVDGLCKAR 337
Query: 195 DW---NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
EA L M+++G P+VVT++ ++D L K GK+D+A RLL M G PN +
Sbjct: 338 QEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVY 397
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
YN+L+ G C +V+ A ELFV+M GC +Y +I+
Sbjct: 398 TYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIIS 439
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 128/403 (31%), Positives = 215/403 (53%), Gaps = 22/403 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNST----GLFPDLYTYNILINCFCKMGRVSH 70
P V ++N + L+ D L +R S+ G+ P++YTYNIL+ C GR+
Sbjct: 116 PSVPAYNAVLLALS-----DASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEE 170
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPNVFTYNTLI 129
V+G + + PNAVT+ +L+ C + A + + +R G +PN+ T+N+++
Sbjct: 171 AVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMV 230
Query: 130 NGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENIN 177
NGL + G A +F+EM + G + ++ +F +M +
Sbjct: 231 NGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLV 290
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
PDVVT+TS+I C A + +A L+ +M ++G++ N VTF ++D CK G +D+A
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
++ M + G++P+ YN L++G+C GR++ A+EL ME+ V +YS +I+GYCK
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCK 410
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
++ A L +ML KG+ PD + Y++L L E ++ A +LF+ M + GV D +T
Sbjct: 411 VGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFT 470
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Y T IDG CK + +A+ L + D+ Y+ LI+GL
Sbjct: 471 YTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 513
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 196/402 (48%), Gaps = 38/402 (9%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
+ P + +FN + L K + +F + GL PD+ +YN L++ +CK+G +
Sbjct: 219 AKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESL 278
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
V + + P+ VTFTSLI C + +A AL ++R G N T+ LI+G
Sbjct: 279 AVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDG- 337
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
F +GF+D A +M+ I P VV Y ++I G+C
Sbjct: 338 ----------------------FCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCK 375
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
+ A+ L+ EM + V+P+VVT++ I+ CK G +D A +L M++ GV P+A
Sbjct: 376 LGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT 435
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
Y++L+ G C R+N A ELF +M +G F+Y+ LI+G+CK +E ALSL+ EM+
Sbjct: 436 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 495
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR------------- 359
KG+ PDVV Y+ L L + + + A +L ++ + D Y
Sbjct: 496 RKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKS 555
Query: 360 --TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ G C + EA ++++++ +LD Y+ LI G
Sbjct: 556 VVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHG 597
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 183/366 (50%), Gaps = 14/366 (3%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G P + YN ++ + L +LR PN T+ L++ LCA R+ EA
Sbjct: 113 GYAPSVPAYNAVLLALSD-ASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM-ASGNGEFGV-------- 157
+ +R GC PN TYNTL+ R G A + M GN + +
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231
Query: 158 ----EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
G ++ A+++F +M E + PDVV+Y +++ G+C +E+ + EM +G+ P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
+VVTF ++ CK G +++A L+ M + G+R N + L+DGFC G ++ A
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
M G +V Y+ LINGYCK ++ A L EM +K +KPDVV Y+T+ ++
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
++ AF+L +M + GV D TY + I GLC+ + +A ELF + L + D Y
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471
Query: 394 NCLIDG 399
LIDG
Sbjct: 472 TTLIDG 477
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 178/400 (44%), Gaps = 40/400 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +F L K + + ++L ++ GL + T+ LI+ FCK G + +
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + + P+ V + +LI G C R+ A L ++ +P+V TY+T+I+G +
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCK 410
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G+ +D A +L +M + + PD +TY+S+IRG C
Sbjct: 411 VGN-----------------------LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEK 447
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
N+A L M+ GVQP+ T+ ++D CK G +++A L D MI+ GV P+ Y+
Sbjct: 448 RLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYS 507
Query: 255 TLMDGFCLTGRVNRAKELFVSMES--------------MGCTHTVF-SYSILINGYCKNK 299
L++G + R A L + + C+ F S L+ G+C
Sbjct: 508 VLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKG 567
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++ A +Y ML + K D +Y+ L V +A +M R G + ++ +
Sbjct: 568 LMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTI 627
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCEL-DIRAYNCLID 398
+ + GL + +VEA + L + C L D A LID
Sbjct: 628 SLVRGLFEEGMVVEADNAIQDL-LTCCPLADAEASKALID 666
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 126/387 (32%), Positives = 207/387 (53%), Gaps = 23/387 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ +L P+PP + FN + G L K+KHY TVL L +++ G+ P+L NILIN F
Sbjct: 49 LFNRLLQQNPTPPNI-EFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSF 107
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME----------AAALFTK 112
C++G + F VL +IL+ + PN +T +LIKGLC +I + A LF K
Sbjct: 108 CQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNK 167
Query: 113 LRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV-------EGF----- 160
+ + P+V+T+ L++G + G A N+ M + GV +G+
Sbjct: 168 MILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQ 227
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
V+KAK +F M ++PD+ +Y+ +I GFC +EA LL EM + + PNVVT++
Sbjct: 228 VNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSS 287
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
++D LCK+GK+ A +L+D M G PN Y++++D C +V+ A L M++ G
Sbjct: 288 LIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQG 347
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
+++Y+ILI G C++ ++E A ++ ++L KG +V Y + + + A
Sbjct: 348 IQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEAL 407
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCK 367
L +M+ +G + TY I L K
Sbjct: 408 TLLSKMEDNGCIPNAKTYEIIILSLFK 434
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 168/343 (48%), Gaps = 33/343 (9%)
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V + R+L+ TP + F ++ L L K+ G +PN+ N
Sbjct: 43 VDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 102
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
LIN + GH A ++ ++ L+M P+ +T ++I
Sbjct: 103 LINSFCQLGHIPSAFSVLTKI--------------------LKM---GYKPNTITLNTLI 139
Query: 188 RGFCYANDWNEAKCLLIEMMD----------QGVQPNVVTFNVIMDELCKNGKMDEASRL 237
+G C ++ C++ ++ D + + P+V TF +++D CK G++ EA +
Sbjct: 140 KGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNV 199
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
L +M+ G++P YN+LMDG+ L +VN+AK +F +M +G + + SYSILING+CK
Sbjct: 200 LAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCK 259
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
K ++ A+ L EM K I P+VV Y++L L + ++ A KL DEM G + T
Sbjct: 260 IKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVT 319
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Y + +D LCKN + A+ L ++ + ++ Y LI GL
Sbjct: 320 YSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGL 362
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 132/262 (50%), Gaps = 24/262 (9%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF+ M + SP + S++IL K K D + L K ++ + P++ TY+ LI+
Sbjct: 234 IFNTMAQLGVSPD-IQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGL 292
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G++S+ ++ + PN VT++S++ LC ++ A AL T+++ G +PN+
Sbjct: 293 CKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNM 352
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+TY LI GL ++G A +FE+ L +K N+N V T
Sbjct: 353 YTYTILIKGLCQSGKLEDARKVFED---------------------LLVKGHNLN--VYT 389
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT +I+GFC ++EA LL +M D G PN T+ +I+ L K + + A +LL MI
Sbjct: 390 YTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMI 449
Query: 243 QIGVRPNAFVYNTLMDGFCLTG 264
+ + N L+ +TG
Sbjct: 450 ETNFDGRVALTNDLIASIWVTG 471
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 123/380 (32%), Positives = 186/380 (48%), Gaps = 27/380 (7%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
N L +N D + ++F+R+ G PD YTY+++I C+M ++ F +L +
Sbjct: 129 NCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKV 188
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
F P +T L + C R+ +A +F + P+ YN +I+G R
Sbjct: 189 RGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIP----SPDAIAYNAIIHGHCRKND--- 241
Query: 141 ALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
D A E +M + + PDV TY +I G C A+ ++A
Sbjct: 242 --------------------CDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKAS 281
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
+L EM+D+GV P+ VTFN IMD LCK GK + A LL +M + RP+ YNTL+ G
Sbjct: 282 EMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGL 341
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
C V+RAK+L S G V +YSIL +G CK I+ A L EM KG P++
Sbjct: 342 CKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNL 401
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
V YNTL L + + E+A++L + + G D TY +DGLCK + +A+++
Sbjct: 402 VTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEG 461
Query: 381 LRILKCELDIRAYNCLIDGL 400
+ C + Y L++GL
Sbjct: 462 MLKRGCTPSVITYTALMEGL 481
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/407 (31%), Positives = 198/407 (48%), Gaps = 23/407 (5%)
Query: 9 NMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV 68
N RPS C++N L L K ++ D L S+G PD+ TY+IL + CK GR+
Sbjct: 326 NCRPS---CCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRI 382
Query: 69 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTL 128
F ++ + TPN VT+ +LI GLC S+ +A L L G P+V TY +
Sbjct: 383 DEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTII 442
Query: 129 INGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENI 176
++GL + G AL + E M V G VD+A +F +M ++
Sbjct: 443 VDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDC 502
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ--PNVVTFNVIMDELCKNGKMDEA 234
D + Y S++ G+C ++ EA+ ++ G++ P + +N +MD CK G++DE
Sbjct: 503 TADALAYVSLVNGYCKSSRTKEAQKVV-----DGIRGTPYIDVYNALMDGYCKEGRLDEI 557
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+ + M G PN YN +MDG C G+V+ A SM S GC V SY+I+I+G
Sbjct: 558 PNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDG 617
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
K + + A + +M+ GI PD V YNTL + + + A + M + GV D
Sbjct: 618 LFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPD 677
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI-RAYNCLIDGL 400
TY T I GL + + + +A EL + C + YN +ID L
Sbjct: 678 NVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRL 724
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 123/413 (29%), Positives = 197/413 (47%), Gaps = 28/413 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ ML+ +P +++++ L + D ++ + G P++ Y IL F
Sbjct: 147 MFERMLDAGYAPDSY-TYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAF 205
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK GR+ I R+ +P+A+ + ++I G C ++ A ++ P+V
Sbjct: 206 CKTGRLKDAL----EIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDV 261
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV----------------EGFVDKAKE 166
FTYN LI+GL + T A + EM + GV G ++A
Sbjct: 262 FTYNILIDGLCKASKTDKASEMLHEMV----DRGVTPDTVTFNSIMDGLCKAGKFERAHS 317
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
L M + N P TY ++I G C + + AK L+ E + G P+VVT++++ D LC
Sbjct: 318 LLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLC 377
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
K G++DEA L+ M G PN YNTL+DG C + +A EL S+ S G V
Sbjct: 378 KRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVV 437
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+Y+I+++G CK ++ AL + ML +G P V+ Y L L +V+ A +F EM
Sbjct: 438 TYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEM 497
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
AD Y + ++G CK+S EA ++ +R I YN L+DG
Sbjct: 498 VSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPY---IDVYNALMDG 547
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 191/376 (50%), Gaps = 26/376 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++NI+ L K+ D + ++S G PD+ +YNI+I+ K + V
Sbjct: 571 PNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQV 630
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++++ P+AVT+ +L+ C E R +A + + G +P+ TYNTLI+GL +
Sbjct: 631 LDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQ 690
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
T A L EM +++ + TY ++I C
Sbjct: 691 TNRLGDAYELMHEM----------------------LRNGCVVSACTTYNTIIDRLCKEG 728
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+A L+ M GV+ N VT+N+ +D LCK G++DEAS LL M + + Y
Sbjct: 729 CLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR---DEVSYT 785
Query: 255 TLMDGFCLTGRVNRAKELFVSMESM-GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
T++ G C +++RA +L M ++ G T ++++LI+ + K K ++ AL+L G M+
Sbjct: 786 TVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQ 845
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+G P V+ YN + L ++ +V++A++LFDEM G+ A + +Y I GLC E
Sbjct: 846 RGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKE 905
Query: 374 AVELFRTLRILKCELD 389
A+++ + CE+D
Sbjct: 906 ALQVLEEMASSDCEID 921
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 175/388 (45%), Gaps = 28/388 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +N L K D + ++F+ + G P++ TYNI+++ CK G+V F
Sbjct: 536 PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPF 595
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + P+ V++ +I GL S+ EA + ++ G P+ TYNTL+
Sbjct: 596 LESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLM----- 650
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+F E D A + M ++PD VTY ++I G N
Sbjct: 651 ------------------AQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTN 692
Query: 195 DWNEAKCLLIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+A L+ EM+ G V T+N I+D LCK G + +A L+D M GV N Y
Sbjct: 693 RLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTY 752
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N +D C GR++ A L M+++ SY+ +I G CK ++++ A L EM++
Sbjct: 753 NIFIDRLCKEGRLDEASSLLSEMDTL---RDEVSYTTVIIGLCKAEQLDRASKLAREMVA 809
Query: 314 -KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
KG+ +N L + +++ A L M + G + TY I LCK +
Sbjct: 810 VKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVD 869
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
+A ELF + + +Y LI GL
Sbjct: 870 KAWELFDEMAVRGIVASSVSYTVLIYGL 897
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 120/304 (39%), Gaps = 61/304 (20%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILI-------------- 59
PP ++N L K + +D + + K + G+ PD TYN LI
Sbjct: 640 PPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYE 699
Query: 60 ----------------------NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 97
+ CK G + +++ + N VT+ I L
Sbjct: 700 LMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRL 759
Query: 98 CAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV 157
C E R+ EA++L +++ E +Y T+I GL + A L EM + V
Sbjct: 760 CKEGRLDEASSLLSEMDTLRDE---VSYTTVIIGLCKAEQLDRASKLAREMVA------V 810
Query: 158 EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
+G + T+ +I F +EA LL M+ +G P+V+T
Sbjct: 811 KGLCITSH----------------TFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVIT 854
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
+N+++ LCK K+D+A L D M G+ ++ Y L+ G C GR A ++ M
Sbjct: 855 YNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMA 914
Query: 278 SMGC 281
S C
Sbjct: 915 SSDC 918
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 128/403 (31%), Positives = 215/403 (53%), Gaps = 22/403 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNST----GLFPDLYTYNILINCFCKMGRVSH 70
P V ++N + L+ D L +R S+ G+ P++YTYNIL+ C GR+
Sbjct: 116 PSVPAYNAVLLALS-----DASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEE 170
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPNVFTYNTLI 129
V+G + + PNAVT+ +L+ C + A + + +R G +PN+ T+N+++
Sbjct: 171 AVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMV 230
Query: 130 NGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENIN 177
NGL + G A +F+EM + G + ++ +F +M +
Sbjct: 231 NGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLV 290
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
PDVVT+TS+I C A + +A L+ +M ++G++ N VTF ++D CK G +D+A
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
++ M + G++P+ YN L++G+C GR++ A+EL ME+ V +YS +I+GYCK
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCK 410
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
++ A L +ML KG+ PD + Y++L L E ++ A +LF+ M + GV D +T
Sbjct: 411 VGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFT 470
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Y T IDG CK + +A+ L + D+ Y+ LI+GL
Sbjct: 471 YTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 513
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 196/402 (48%), Gaps = 38/402 (9%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
+ P + +FN + L K + +F + GL PD+ +YN L++ +CK+G +
Sbjct: 219 AKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESL 278
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
V + + P+ VTFTSLI C + +A AL ++R G N T+ LI+G
Sbjct: 279 AVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDG- 337
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
F +GF+D A +M+ I P VV Y ++I G+C
Sbjct: 338 ----------------------FCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCK 375
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
+ A+ L+ EM + V+P+VVT++ I+ CK G +D A +L M++ GV P+A
Sbjct: 376 LGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT 435
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
Y++L+ G C R+N A ELF +M +G F+Y+ LI+G+CK +E ALSL+ EM+
Sbjct: 436 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 495
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR------------- 359
KG+ PDVV Y+ L L + + + A +L ++ + D Y
Sbjct: 496 RKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKS 555
Query: 360 --TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ G C + EA ++++++ +LD Y+ LI G
Sbjct: 556 VVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHG 597
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 183/366 (50%), Gaps = 14/366 (3%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G P + YN ++ + L +LR PN T+ L++ LCA R+ EA
Sbjct: 113 GYAPSVPAYNAVLLALSD-ASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM-ASGNGEFGV-------- 157
+ +R GC PN TYNTL+ R G A + M GN + +
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231
Query: 158 ----EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
G ++ A+++F +M E + PDVV+Y +++ G+C +E+ + EM +G+ P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
+VVTF ++ CK G +++A L+ M + G+R N + L+DGFC G ++ A
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
M G +V Y+ LINGYCK ++ A L EM +K +KPDVV Y+T+ ++
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
++ AF+L +M + GV D TY + I GLC+ + +A ELF + L + D Y
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471
Query: 394 NCLIDG 399
LIDG
Sbjct: 472 TTLIDG 477
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 178/400 (44%), Gaps = 40/400 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +F L K + + ++L ++ GL + T+ LI+ FCK G + +
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + + P+ V + +LI G C R+ A L ++ +P+V TY+T+I+G +
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCK 410
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G+ +D A +L +M + + PD +TY+S+IRG C
Sbjct: 411 VGN-----------------------LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEK 447
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
N+A L M+ GVQP+ T+ ++D CK G +++A L D MI+ GV P+ Y+
Sbjct: 448 RLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYS 507
Query: 255 TLMDGFCLTGRVNRAKELFVSMES--------------MGCTHTVF-SYSILINGYCKNK 299
L++G + R A L + + C+ F S L+ G+C
Sbjct: 508 VLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKG 567
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++ A +Y ML + K D +Y+ L V +A +M R G + ++ +
Sbjct: 568 LMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTI 627
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCEL-DIRAYNCLID 398
+ + GL + +VEA + L + C L D A LID
Sbjct: 628 SLVRGLFEEGMVVEADNAIQDL-LTCCPLADAEASKALID 666
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 121/381 (31%), Positives = 195/381 (51%), Gaps = 17/381 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFG-CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
+F +L+ +P V +++ G C+A + +D LF +N G P TYN++I+
Sbjct: 345 LFQKLLHSGVTPSTVAYTSLIHGLCMANS--FDDARELFADMNRRGCPPSPVTYNVMIDA 402
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK G + ++ +++ P+ VT+ +++ GLC SR+ EA LF ++ GC PN
Sbjct: 403 SCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPN 462
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
++NT+I GL + A G +D+A L +M D+ PDVV
Sbjct: 463 RRSHNTIILGLCQQSKIDQACQ--------------RGKLDEAFRLLKRMTDDGHVPDVV 508
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY+++I G C ++A+ LL +M+ + +P VVT N ++ LCK G++ EA +LD M
Sbjct: 509 TYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAM 568
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G P+ YNTL+ G C G+ RA+EL M + G V +Y+ L++G CK +
Sbjct: 569 VSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRL 628
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A ++ +M S G P++ Y L + QV+ KLF EM G++ D Y T
Sbjct: 629 PEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTL 688
Query: 362 IDGLCKNSYIVEAVELFRTLR 382
LCK+ A+E+ R R
Sbjct: 689 AAELCKSGRSARALEILREGR 709
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 126/389 (32%), Positives = 192/389 (49%), Gaps = 32/389 (8%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+NI+ L +N D + +F+++N + PD ++Y ILI+ K G+++ + ++L
Sbjct: 291 YNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLL 350
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
S TP+ V +TSLI GLC + +A LF + GC P+ TYN +I+ +
Sbjct: 351 HSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCK----- 405
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
G +++A +L +M ++ PDVVTY +V+ G C ++ EA
Sbjct: 406 ------------------RGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEA 447
Query: 200 KCLLIEMMDQGVQPNVVTFNVI---------MDELCKNGKMDEASRLLDLMIQIGVRPNA 250
L EM G PN + N I +D+ C+ GK+DEA RLL M G P+
Sbjct: 448 LLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDV 507
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
Y+TL+ G C RV+ A+ L M C TV + + LI+G CK I+ A +
Sbjct: 508 VTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDA 567
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M+S G PDVV YNTL Q ERA +L +M G+A + TY + GLCK +
Sbjct: 568 MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 627
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ EA +F ++ C ++ Y LI G
Sbjct: 628 LPEACGVFAQMKSSGCAPNLFTYTALILG 656
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/491 (25%), Positives = 208/491 (42%), Gaps = 98/491 (19%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF M P V +N+L L+K + + V + + + G FPD +T+ ++
Sbjct: 32 IFSLMEECHSPYPDV--YNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGL 89
Query: 63 CKMGRVSHGFVVLGRILRSCFTP-------------------------------NAVTFT 91
CK G++ +V+ + P N+ +
Sbjct: 90 CKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMPVANSSAYN 149
Query: 92 SLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE---- 147
++ LC +R+ +A L + + ++++ GL +G AL ++ E
Sbjct: 150 IVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRRE 209
Query: 148 --------MASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA------ 193
+ G F G VDKA+EL M DE PD V+Y +V+ G C A
Sbjct: 210 PCLVTLNVLLEG---FCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEA 266
Query: 194 ----------------------------------NDW-NEAKCLLIEMMDQGVQPNVVTF 218
ND +EA + +M ++ V P+ ++
Sbjct: 267 VRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSY 326
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
+++D L K GK+++A L ++ GV P+ Y +L+ G C+ + A+ELF M
Sbjct: 327 GILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNR 386
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
GC + +Y+++I+ CK +E A L +M+ G PDVV YNT+ L + +VE
Sbjct: 387 RGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEE 446
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV------ELFRTLRILKCE---LD 389
A LF+EM+R G + ++ T I GLC+ S I +A E FR L+ + + D
Sbjct: 447 ALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPD 506
Query: 390 IRAYNCLIDGL 400
+ Y+ LI GL
Sbjct: 507 VVTYSTLISGL 517
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 119/289 (41%), Gaps = 49/289 (16%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
D L KR+ G PD+ TY+ LI+ C + RV +L +++ P VT +L
Sbjct: 489 DEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTL 548
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG 153
I GLC RI EA + + G P+V TYNTL++G R G T A L +M +
Sbjct: 549 IHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGL 608
Query: 154 EFGVEGFVD------KAKEL------FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
V + KA L F QMK P++ TYT++I GFC A +
Sbjct: 609 APNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLK 668
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCK---------------------------------- 227
L EM+ G+ P+ V + + ELCK
Sbjct: 669 LFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDG 728
Query: 228 ---NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
GKM+ A + M++ G P +L+ G C +G+ A+ +
Sbjct: 729 LLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVL 777
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 138/322 (42%), Gaps = 37/322 (11%)
Query: 85 PNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNL 144
P + FTS+I+G C R EA +F+ + P YN LI+ L + T
Sbjct: 8 PAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECH-SPYPDVYNVLIDSLSKRQET------ 60
Query: 145 FEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
+ K++ M D PD T+T+++ G C A +EA+ ++
Sbjct: 61 -----------------EAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMD 103
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
EM + + P T + + ELC G M+ A +LL++M N+ YN ++ C
Sbjct: 104 EMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMPVA----NSSAYNIVVVALCKAA 159
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
RV+ A EL +M S ++ G + I+ AL +Y E +P +V N
Sbjct: 160 RVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRR---EPCLVTLN 216
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI- 383
L QV++A +L M + A D +Y T +DGLCK + EAV LF +
Sbjct: 217 VLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELP 276
Query: 384 -----LKCELDIRAYNCLIDGL 400
+R YN +I GL
Sbjct: 277 SSSSSSSSPPSLRGYNIVILGL 298
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 99/247 (40%), Gaps = 49/247 (19%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V + N L L K + + S+G PD+ TYN L++ C+ G+
Sbjct: 536 RQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTER 595
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+L ++ PN VT+T+L+ GLC +R+ EA +F +++ GC PN+FTY LI
Sbjct: 596 ARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALIL 655
Query: 131 GLYRTGHTIVALNLFEEMA--------------------SGNG----------------- 153
G G L LF EM SG
Sbjct: 656 GFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSE 715
Query: 154 -------EFGVEGFVDKAK-ELFLQMKDENIN----PDVVTYTSVIRGFCYANDWNEAKC 201
F V+G ++ K E+ L + + P S++ G C + EA+
Sbjct: 716 AWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARA 775
Query: 202 LLIEMMD 208
+L E+MD
Sbjct: 776 VLEEIMD 782
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 114/264 (43%), Gaps = 41/264 (15%)
Query: 171 MKDENINPDVVTYTSVIRGFC---------------------YANDWN------------ 197
M + I P + +TSVI+G+C Y + +N
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDVYNVLIDSLSKRQET 60
Query: 198 -EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
K ++ M+D+G P+ TF I+ LCK GKMDEA ++D M + P + L
Sbjct: 61 EAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFL 120
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
CL G + RA +L M + +Y+I++ CK ++ AL L M K I
Sbjct: 121 AHELCLRGSMERAFQLLEIMPVANSS----AYNIVVVALCKAARVDDALELARTMSEKRI 176
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+++ V L + +++ A +++ E +R+ T ++G C + +A E
Sbjct: 177 PLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLV---TLNVLLEGFCSRGQVDKARE 233
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
L R + +C D +Y ++DGL
Sbjct: 234 LLRAMPDEECAPDEVSYCTVLDGL 257
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 123/387 (31%), Positives = 201/387 (51%), Gaps = 25/387 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLS--LFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
P V S+N + + +++ + + +++ + + + P++YTYNILI FC +G + G
Sbjct: 175 PGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGL 234
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
G + R+ PN VT+ +LI C RI EA L + G +PN+ +YN +INGL
Sbjct: 235 GCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGL 294
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
R G A + EEM G +GF PD VTY +++ G+C
Sbjct: 295 CREGSMKEAWEILEEM-------GYKGFT----------------PDEVTYNTLLNGYCK 331
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
++++A + EM+ GV P+VVT+ +++ +CK ++ A D M G+RPN
Sbjct: 332 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 391
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
Y TL+DGF G +N A + M G + +V +Y+ I+G+C + +E AL + EM+
Sbjct: 392 YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 451
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
KG+ PDVV Y+T+ +++RAF++ EM GV+ D TY + I GLC+ +
Sbjct: 452 EKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLT 511
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDG 399
EA +L + + + D Y LI+
Sbjct: 512 EACDLSQEMLDMGLPPDEFTYTTLINA 538
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 122/388 (31%), Positives = 187/388 (48%), Gaps = 13/388 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
++ M+ R SP V ++NIL L F + G P++ TYN LI+ +
Sbjct: 201 VYREMIRSRVSPN-VYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAY 259
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CKMGR+ F +L + PN +++ +I GLC E + EA + ++ G P+
Sbjct: 260 CKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDE 319
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQ 170
TYNTL+NG + G+ AL + EM V + +++A E F Q
Sbjct: 320 VTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQ 379
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M+ + P+ TYT++I GF NEA +L EM + G P+VVT+N + C +
Sbjct: 380 MRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLER 439
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
M+EA ++ M++ G+ P+ Y+T++ GFC G ++RA ++ M G + +YS
Sbjct: 440 MEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSS 499
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI G C+ + + A L EML G+ PD Y TL + +A L DEM G
Sbjct: 500 LIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKG 559
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELF 378
D TY I+GL K + EA L
Sbjct: 560 FLPDAVTYSVLINGLNKQARTREAKRLL 587
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 200/413 (48%), Gaps = 29/413 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L K D L K ++S G+ P+L +YN++IN C+ G + + +
Sbjct: 247 PNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEI 306
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + FTP+ VT+ +L+ G C E +A + ++ G P+V TY LIN + +
Sbjct: 307 LEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCK 366
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+ A+ F++M F +G +++A + +M + +P VVT
Sbjct: 367 ARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVT 426
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y + I G C EA ++ EM+++G+ P+VV+++ I+ C+ G++D A ++ M+
Sbjct: 427 YNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMV 486
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ GV P+A Y++L+ G C R+ A +L M MG F+Y+ LIN YC ++
Sbjct: 487 EKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLN 546
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK-LFDEMQRDGVAADTWTYRTF 361
AL L+ EM+ KG PD V Y+ L L + + A + LF + + V +D TY T
Sbjct: 547 KALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDV-TYDTL 605
Query: 362 ID---------------GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I+ G C + EA +F ++ + YN +I G
Sbjct: 606 IENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHG 658
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 170/349 (48%), Gaps = 35/349 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L + K ++ + + F ++ GL P+ TY LI+ F + G ++ + +
Sbjct: 352 PSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRI 411
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + S F+P+ VT+ + I G C R+ EA + ++ G P+V +Y+T+I+G R
Sbjct: 412 LNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCR 471
Query: 135 TGHTIVALNLFEEMASGNGEFGV-----------EGFVD-----KAKELFLQMKDENINP 178
G A + +EM E GV +G + +A +L +M D + P
Sbjct: 472 KGELDRAFQMKQEMV----EKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPP 527
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D TYT++I +C D N+A L EM+ +G P+ VT++V+++ L K + EA RLL
Sbjct: 528 DEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLL 587
Query: 239 DLMIQIGVRPNAFVYNTLMD---------------GFCLTGRVNRAKELFVSMESMGCTH 283
+I P+ Y+TL++ GFC+ G ++ A +F SM
Sbjct: 588 FKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKP 647
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
Y+++I+G+C+ + A +LY EM+ G P V TL LF+
Sbjct: 648 GEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFK 696
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 148/317 (46%), Gaps = 21/317 (6%)
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
+ ++ F ++K + I +A + G P V +YN++++ + R+ ++
Sbjct: 138 YNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKL- 196
Query: 143 NLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
A+E++ +M ++P+V TY +IRGFC + +
Sbjct: 197 --------------------SAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGC 236
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
EM G PNVVT+N ++D CK G++DEA LL M G++PN YN +++G C
Sbjct: 237 FGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCR 296
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G + A E+ M G T +Y+ L+NGYCK AL ++ EM+ G+ P VV
Sbjct: 297 EGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVT 356
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
Y L + + + RA + FD+M+ G+ + TY T IDG + + EA + +
Sbjct: 357 YTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMT 416
Query: 383 ILKCELDIRAYNCLIDG 399
+ YN I G
Sbjct: 417 ESGFSPSVVTYNAFIHG 433
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 141/333 (42%), Gaps = 29/333 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + + L + + + GL PD+ +Y+ +I+ FC+ G + F +
Sbjct: 422 PSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQM 481
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ +P+AVT++SLI+GLC R+ EA L ++ G P+ FTY TLIN
Sbjct: 482 KQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCV 541
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G AL+L +EM NG + +AK L ++ E P V
Sbjct: 542 EGDLNKALHLHDEMIHKGFLPDAVTYSVLING-LNKQARTREAKRLLFKLIYEESVPSDV 600
Query: 182 TY---------------TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
TY ++I+GFC +EA + M+++ +P +NVI+ C
Sbjct: 601 TYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHC 660
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
+ G + +A L MI G P+ TL+ G E+ +
Sbjct: 661 RGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAE 720
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
+L+ K +E L++ +M G+ P+
Sbjct: 721 LAKVLVEINHKEGNMEAVLNVLTDMAKDGLLPN 753
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 97/253 (38%), Gaps = 40/253 (15%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP ++ L + L L + G PD TY++LIN K R
Sbjct: 526 PPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKR 585
Query: 74 VLGRILRSCFTPNAVTF---------------TSLIKGLCAESRIMEAAALFTKLRVFGC 118
+L +++ P+ VT+ +LIKG C + + EA +F +
Sbjct: 586 LLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNH 645
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINP 178
+P YN +I+G R G+ A NL++EM GFV P
Sbjct: 646 KPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHS-------GFV----------------P 682
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL-CKNGKMDEASRL 237
VT ++I+ + NE +I + + N ++ E+ K G M+ +
Sbjct: 683 HTVTVITLIKAL-FKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNV 741
Query: 238 LDLMIQIGVRPNA 250
L M + G+ PN+
Sbjct: 742 LTDMAKDGLLPNS 754
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 121/360 (33%), Positives = 191/360 (53%), Gaps = 24/360 (6%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
FD ML+ + SP + ++ L + +LF + S GL PD TY LI+ +C
Sbjct: 386 FDEMLSKKISPDYI-TYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYC 444
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K G + + F + +++ TPN VT+ +LI GLC + A L ++R G + NV
Sbjct: 445 KAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVC 504
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
YN+++NG+ + G+ A+ L +EM I+PD +TY
Sbjct: 505 IYNSMVNGICKAGNIEQAIKLMKEMEVAG-----------------------IDPDAITY 541
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
T+VI +C D ++A LL EM+D+G+QP VVTFNV+M+ C G +++ RLL M++
Sbjct: 542 TTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLE 601
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G+ P+A YNTLM C+ +N +++ M + G +Y+ILI G+CK + ++
Sbjct: 602 KGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKE 661
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A LY EM+ KG P V YN L ++ ++ A +LF+EM+ G+ AD Y F+D
Sbjct: 662 AWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVD 721
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 185/392 (47%), Gaps = 23/392 (5%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
++ R S P V S++ + L L + GL P+ YTYN +I CK+G+
Sbjct: 284 MDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGK 343
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
VL ++ P+ V +T+LI G + A F ++ P+ TY T
Sbjct: 344 SFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTT 403
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
LI G + G I NLF EM S + PD VTYT++I
Sbjct: 404 LIQGFGQGGKVIEPQNLFHEMIS-----------------------RGLKPDEVTYTTLI 440
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
+C A + A L EM+ G+ PN+VT+ ++D LCK+G++D A+ LLD M + G++
Sbjct: 441 DVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQ 500
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
N +YN++++G C G + +A +L ME G +Y+ +I+ YC+ +I+ A L
Sbjct: 501 LNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKL 560
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
EML +G++P VV +N L + +E +L M G+ D TY T + C
Sbjct: 561 LQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCI 620
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + ++++ +R D YN LI G
Sbjct: 621 RNSMNTTTKIYKRMRNQGVAPDSNTYNILIKG 652
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 177/347 (51%), Gaps = 14/347 (4%)
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
KM + +H + + + PN + F + L + EA L KL +G V
Sbjct: 171 KMTQFTHRLIYTYKY----WGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVD 226
Query: 124 TYNTLINGLYRTGHTI-VALNLFEE--MASGNGEFGV-------EGFVDKAKELFLQMKD 173
+ N ++ + I +A+ +F E ++ + + G V +A L +QM
Sbjct: 227 SCNAFLSRIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDF 286
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
+ PDVV+Y++VI G+C+ + +A L+ +M +G++PN T+N I+ LCK GK E
Sbjct: 287 RSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFE 346
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A ++L M+ + P+ VY TL+ GF G V A + F M S + +Y+ LI
Sbjct: 347 AEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQ 406
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
G+ + ++ +L+ EM+S+G+KPD V Y TL V + ++ AF L +EM + G+
Sbjct: 407 GFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTP 466
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ TY IDGLCK+ + A EL +R +L++ YN +++G+
Sbjct: 467 NIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGI 513
>gi|356529509|ref|XP_003533333.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12300, mitochondrial-like [Glycine max]
Length = 450
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 134/395 (33%), Positives = 203/395 (51%), Gaps = 50/395 (12%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML MR +PP V FN + A KHY T +SL RL G+ PD +T NIL+NCFC
Sbjct: 58 FNSMLCMRHTPP-VIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNILMNCFC 116
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
MG+++ GF VL +IL+ + P+ +TFT+LIKGLC + ++ +A KL G + +
Sbjct: 117 HMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQV 176
Query: 124 TYNTLINGLYRTGHTIVALN-----------------------------------LFEEM 148
+Y TLING+ + G T A+ LF EM
Sbjct: 177 SYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEM 236
Query: 149 ASGNGEFGV-------EGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+ V +GF VD+A LF +M +N+ P +VTY S++ G C +
Sbjct: 237 TAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGRI 296
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+ L+ EM D+G+ +V+T+N ++D LCKNG +D A L + M R + + L
Sbjct: 297 SYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMKD--XRFDRLTFTIL 354
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG C GR+ A+E+F + + V+ Y+++INGYCK +E AL++ +M G
Sbjct: 355 LDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLLEEALTMRSKMEDNGC 414
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
P V + + LFE + ++A KL EM G+
Sbjct: 415 IPSAVTFEIIINALFEKDENDKAEKLLHEMIARGL 449
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 156/317 (49%), Gaps = 25/317 (7%)
Query: 84 TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALN 143
TP + F ++ A +L +L + G +P+ FT N L +N
Sbjct: 67 TPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNIL-------------MN 113
Query: 144 LFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
F M N F V + K P +T+T++I+G C N+A
Sbjct: 114 CFCHMGQINFGFSVLAKILK----------RGYQPHTITFTTLIKGLCLKGQVNKALHFH 163
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
+++ QG++ + V++ +++ +CK G A +L+ + +PN +YNT++D C
Sbjct: 164 DKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKY 223
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
V+ A LF M + G + V SY+I+I G+CK+K ++ AL+L+ EM K + P +V Y
Sbjct: 224 QLVSEAYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTY 283
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
+L L + ++ ++L DEM G+ AD TY + IDGLCKN ++ A+ LF ++
Sbjct: 284 GSLMDGLCKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMKD 343
Query: 384 LKCELDIRAYNCLIDGL 400
+ D + L+DGL
Sbjct: 344 XR--FDRLTFTILLDGL 358
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 120/240 (50%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
VD A F M P V+ + ++ F ++ A L + +G+QP+ T N+
Sbjct: 51 VDDAVSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNI 110
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+M+ C G+++ +L +++ G +P+ + TL+ G CL G+VN+A + + G
Sbjct: 111 LMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 170
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
SY LING CK + GA+ L ++ + KP+V +YNT+ L + V A+
Sbjct: 171 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 230
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LF EM G++A+ +Y I G CK+ + EA+ LF+ + I Y L+DGL
Sbjct: 231 GLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGL 290
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N+L G K+ D L + +R++ + PD+ TYN ++ C G++ V
Sbjct: 175 PDVITYNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEV 231
Query: 75 LGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
L R + R C+ P+ +T+T LI+ C +S + +A L ++R GC+P+V TYN LING+
Sbjct: 232 LDRQMQRECY-PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGIC 290
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ EG +D+A + M P+V+T+ ++R C
Sbjct: 291 K-----------------------EGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCST 327
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
W +A+ LL +M+ +G P+VVTFN++++ LC+ + A +L+ M + G PN+ Y
Sbjct: 328 GRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSY 387
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N L+ GFC +++RA E M S GC + +Y+ L+ CK+ + + A+ + ++ S
Sbjct: 388 NPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSS 447
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG P ++ YNT+ L ++ + E A +L +EM+R G+ D TY T + GL + E
Sbjct: 448 KGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDE 507
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A+++F + L + YN ++ GL
Sbjct: 508 AIKIFHDMEGLSIKPSAVTYNAIMLGL 534
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 186/392 (47%), Gaps = 15/392 (3%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
NI L +N + L +R+ G PD+ LI FC+ G+ ++ +
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
S P+ +T+ LI G C I +A + ++ V P+V TYNT++ L +G
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSV---APDVVTYNTILRSLCDSGKLKE 227
Query: 141 ALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
A+ + + V + V +A +L +M+ + PDVVTY +I
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
G C +EA L M G QPNV+T N+I+ +C G+ +A RLL M++ G P
Sbjct: 288 GICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSP 347
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
+ +N L++ C + RA ++ M GC SY+ L++G+C+ K+++ A+
Sbjct: 348 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYL 407
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
M+S+G PD+V YNTL L + + + A ++ +++ G + TY T IDGL K
Sbjct: 408 EIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKV 467
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
A EL +R + DI Y+ L+ GL
Sbjct: 468 GKTEYAAELLEEMRRKGLKPDIITYSTLLRGL 499
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 174/357 (48%), Gaps = 9/357 (2%)
Query: 53 YTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 112
+ NI + + G + G L R++ P+ + TSLI+G C + +A +
Sbjct: 108 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEI 167
Query: 113 LRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG---------EFGVEGFVDK 163
L G P+V TYN LI G ++G AL + E M+ G + +
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVAPDVVTYNTILRSLCDSGKLKE 227
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
A E+ + PDV+TYT +I C + +A LL EM +G +P+VVT+NV+++
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
+CK G++DEA + L+ M G +PN +N ++ C TGR A+ L M GC+
Sbjct: 288 GICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSP 347
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
+V +++ILIN C+ + + A+ + +M G P+ + YN L + +++RA +
Sbjct: 348 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYL 407
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ M G D TY T + LCK+ AVE+ L C + YN +IDGL
Sbjct: 408 EIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGL 464
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 163/363 (44%), Gaps = 12/363 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + L + + + R +PD+ TY ILI C V +
Sbjct: 207 PDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKL 266
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + P+ VT+ LI G+C E R+ EA + ++GC+PNV T+N ++ +
Sbjct: 267 LDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCS 326
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
TG + A L +M V F + +A ++ +M P+ ++
Sbjct: 327 TGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLS 386
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++ GFC + A L M+ +G P++VT+N ++ LCK+GK D A +L+ +
Sbjct: 387 YNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLS 446
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G P YNT++DG G+ A EL M G + +YS L+ G +++
Sbjct: 447 SKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVD 506
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ ++ +M IKP V YN + + L + Q RA M G TY I
Sbjct: 507 EAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILI 566
Query: 363 DGL 365
+G+
Sbjct: 567 EGI 569
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 138/288 (47%), Gaps = 20/288 (6%)
Query: 122 VFTYNTLINGLYRTGHTIVALN---LFEEMASG--------NGEFGVEGFVDKAKELFLQ 170
V T N +NG+ + +N FEE AS NGE ++ + +
Sbjct: 79 VSTPNGDLNGIGMESSSPNGVNGSRSFEEFASNIHLRKLVRNGEL------EEGLKFLER 132
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + PDV+ TS+IRGFC + +A ++ + + G P+V+T+NV++ CK+G+
Sbjct: 133 MIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGE 192
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+D+A ++L+ M V P+ YNT++ C +G++ A E+ C V +Y+I
Sbjct: 193 IDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTI 249
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI C + + A+ L EM KG KPDVV YN L + + +++ A K + M G
Sbjct: 250 LIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYG 309
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
+ T+ + +C ++A L + C + +N LI+
Sbjct: 310 CQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILIN 357
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 55/125 (44%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
L+ + P + ++N + L K + L + + GL PD+ TY+ L+ G+
Sbjct: 445 LSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGK 504
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V + + P+AVT+ +++ GLC + A + GC+P TY
Sbjct: 505 VDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTI 564
Query: 128 LINGL 132
LI G+
Sbjct: 565 LIEGI 569
>gi|4455203|emb|CAB36526.1| putative protein [Arabidopsis thaliana]
gi|7269532|emb|CAB79535.1| putative protein [Arabidopsis thaliana]
Length = 439
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 131/424 (30%), Positives = 211/424 (49%), Gaps = 61/424 (14%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRL-NSTGL--FPDLYTYNILINCFCKMGRVSHG 71
P + FN + +AK + YD V++L+KR+ N+ G+ PDLYT NIL+NCFC+ + S
Sbjct: 8 PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSA 67
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
LG++++ P+ VT +SL+ G C + I +A + ++ G + +V LI+
Sbjct: 68 LSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDT 127
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
L + + AL E+ +MKD I+P+VVTY+S+I G C
Sbjct: 128 LCKNRLVVPAL-----------------------EVLKRMKDRGISPNVVTYSSLITGLC 164
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
+ +A+ L EM + + PNV+TF+ ++D K GK+ + + +MIQ+ + PN F
Sbjct: 165 KSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVF 224
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG-------- 303
Y++L+ G C+ RV+ A ++ M S GCT V +YS L NG+ K+ ++
Sbjct: 225 TYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDM 284
Query: 304 ---------------------------ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
AL ++G M S G+ P++ YN + LF +V
Sbjct: 285 PQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEV 344
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
E+A F+ MQ+ D TY I G+CK + EA +LF L+ + E D +AY +
Sbjct: 345 EKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIM 404
Query: 397 IDGL 400
I L
Sbjct: 405 IAEL 408
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 128/396 (32%), Positives = 208/396 (52%), Gaps = 24/396 (6%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F M++M P P V G +AK K Y TV+SL +++ G+ + YT NILIN C
Sbjct: 74 FYRMIHMNPRPSFV-ELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLC 132
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
++ + VL ++ + P++VTFT+LI GLC E RI EA LF ++ PN
Sbjct: 133 RLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTV 192
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
T+ L++ L + +G V +A+ +F M ++ + P++ TY
Sbjct: 193 TFTILVDVLCK-----------------------KGMVSEARCVFETMTEKGVEPNIYTY 229
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
+++ G+C + N+A + M+ +G P+V +++++++ CK+ ++DEA LL M +
Sbjct: 230 NALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSE 289
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
+ PN YNTLM G C + A+ELF M S G + +YSIL++G CK+ +E
Sbjct: 290 KELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEE 349
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
AL L M + ++PD+V+YN L +F ++E A +LF ++ +G+ TY I
Sbjct: 350 ALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIK 409
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
GL K EA +LFR + D +YN +I G
Sbjct: 410 GLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQG 445
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 168/324 (51%), Gaps = 23/324 (7%)
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
R++ P+ V + + + + +L ++ +FG N +T N LIN L R
Sbjct: 76 RMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLS 135
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
H A+++ +M + G++ PD VT+T++I G C
Sbjct: 136 HIHFAVSVLSKMF----KLGIQ-------------------PDSVTFTTLINGLCNEGRI 172
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
EA L EM + PN VTF +++D LCK G + EA + + M + GV PN + YN L
Sbjct: 173 KEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNAL 232
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
M+G+CL +N A ++F M GC +V SYSILINGYCK++ I+ A +L +M K +
Sbjct: 233 MNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKEL 292
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
P+ V YNTL L + A +LF +M G+ + TY +DGLCK+ ++ EA++
Sbjct: 293 IPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALK 352
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
L +++ K E DI YN LI G+
Sbjct: 353 LLTSMQERKLEPDIVLYNILIQGM 376
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 120/275 (43%), Gaps = 35/275 (12%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A F +M N P V + ++ L +M GV N T N+
Sbjct: 67 IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNI 126
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ LC+ + A +L M ++G++P++ + TL++G C GR+ A ELF M
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD 186
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF------------V 328
+++IL++ CK + A ++ M KG++P++ YN L
Sbjct: 187 AMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDAS 246
Query: 329 VLFEI-----------------------HQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
+FEI +++ A L +M + +T TY T + GL
Sbjct: 247 KVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGL 306
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
C S ++EA ELF+ + ++R Y+ L+DGL
Sbjct: 307 CHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGL 341
>gi|223635627|sp|Q9SZ20.2|PP339_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g26800
Length = 514
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 131/424 (30%), Positives = 211/424 (49%), Gaps = 61/424 (14%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRL-NSTGL--FPDLYTYNILINCFCKMGRVSHG 71
P + FN + +AK + YD V++L+KR+ N+ G+ PDLYT NIL+NCFC+ + S
Sbjct: 83 PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSA 142
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
LG++++ P+ VT +SL+ G C + I +A + ++ G + +V LI+
Sbjct: 143 LSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDT 202
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
L + + AL E+ +MKD I+P+VVTY+S+I G C
Sbjct: 203 LCKNRLVVPAL-----------------------EVLKRMKDRGISPNVVTYSSLITGLC 239
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
+ +A+ L EM + + PNV+TF+ ++D K GK+ + + +MIQ+ + PN F
Sbjct: 240 KSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVF 299
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG-------- 303
Y++L+ G C+ RV+ A ++ M S GCT V +YS L NG+ K+ ++
Sbjct: 300 TYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDM 359
Query: 304 ---------------------------ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
AL ++G M S G+ P++ YN + LF +V
Sbjct: 360 PQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEV 419
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
E+A F+ MQ+ D TY I G+CK + EA +LF L+ + E D +AY +
Sbjct: 420 EKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIM 479
Query: 397 IDGL 400
I L
Sbjct: 480 IAEL 483
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 169/374 (45%), Gaps = 50/374 (13%)
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
R F+ + + +++ + +A LF + P++ +N ++ + +
Sbjct: 40 RFWVRAFSGTTIDYREVLRSGLHNIKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQ 99
Query: 137 HTIVALNLFEEMASGNG-EFGVEGFV--------------DKAKELFLQMKDENINPDVV 181
V +NL++ + + G E + + A +M I PD+V
Sbjct: 100 MYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIV 159
Query: 182 TYTSVIRGFCYANDWNEA------------------KCLLIE-----------------M 206
T +S++ GFC +N +A +LI+ M
Sbjct: 160 TASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRM 219
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
D+G+ PNVVT++ ++ LCK+G++ +A R L M + PN ++ L+D + G++
Sbjct: 220 KDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKL 279
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
++ ++ M M VF+YS LI G C + ++ A+ + M+SKG P+VV Y+TL
Sbjct: 280 SKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTL 339
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
F+ +V+ KL D+M + GVAA+T + T I G + I A+ +F +
Sbjct: 340 ANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGL 399
Query: 387 ELDIRAYNCLIDGL 400
+IR+YN ++ GL
Sbjct: 400 IPNIRSYNIVLAGL 413
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 138/470 (29%), Positives = 218/470 (46%), Gaps = 85/470 (18%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + L + +LF + G+ PD+ TY +I+ CK + +V
Sbjct: 225 PNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELV 284
Query: 75 LGRILRSCFTPNAVTFTSLIKG-----------------------------------LCA 99
L +++ + F PN VT+ +I G LC
Sbjct: 285 LRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCK 344
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG------ 153
+ EAA F + G +PN+ TY+ L++G G + LNLF M GNG
Sbjct: 345 HGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSM-EGNGIVADQR 403
Query: 154 -------EFGVEGFVDKAKELFLQMKDENINPDVVTY----------------------- 183
+G G +D+ +F QM+++ + PD TY
Sbjct: 404 VFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQM 463
Query: 184 ------------TSVIRGFCYANDWNEAKCLLIEMMDQGV-QPNVVTFNVIMDELCKNGK 230
S+I+GFC + +AK L+ EMM +G+ +PN+V FN I++ LCK G+
Sbjct: 464 IAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGR 523
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ EA + D +I IG RP+ +N+L+DG+ L G++ +A + +M S G V SY+
Sbjct: 524 VVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNT 583
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI+GYC+N I+ L L+GEMLSKG+KP + Y + LF + A K+ EM G
Sbjct: 584 LIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESG 643
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D T + GLC+N+ EA+ +F+ L + + +I N +ID +
Sbjct: 644 TTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAM 693
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 182/382 (47%), Gaps = 15/382 (3%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R + P VC++NIL C + + +LF R TGL D+ +IL+ C R
Sbjct: 113 RVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDD 172
Query: 71 GF-VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGCEPNVFTYNT 127
++L R+ P+ +++ +++K LC +SR A L + + GC PNV TYNT
Sbjct: 173 VVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNT 232
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDEN 175
+I+GL+R G A NLF EM V + +DKA+ + QM
Sbjct: 233 VIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNG 292
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
P+ VTY +I G+ + W E + EM QG+ PN+VT N M LCK+GK EA+
Sbjct: 293 FQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAA 352
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
D M G +PN Y+ L+ G+ G LF SME G ++I+I+ Y
Sbjct: 353 EFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAY 412
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
K ++ + ++ +M +G+ PD Y + + ++ A F++M G+ +
Sbjct: 413 GKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEG 472
Query: 356 WTYRTFIDGLCKNSYIVEAVEL 377
Y + I G C + +V+A EL
Sbjct: 473 IVYHSLIQGFCMHGNLVKAKEL 494
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 184/379 (48%), Gaps = 24/379 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FNI+ K D + +F ++ G+ PD TY I+I F +MGR++ +++
Sbjct: 405 FNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMI 464
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC-EPNVFTYNTLINGLYRTGHT 138
P + + SLI+G C +++A L +++ G PN+ +N++IN L + G
Sbjct: 465 AMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRV 524
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+ A ++F+ FV E PDV+T+ S+I G+ +
Sbjct: 525 VEAHDIFD-------------FVIHIGE----------RPDVITFNSLIDGYGLVGKIEK 561
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A +L M+ G++P+VV++N ++D C+NG++D+ L M+ GV+P Y ++
Sbjct: 562 AFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILH 621
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G GR AK++ M G T + + I++ G C+N + A++++ ++ + +K
Sbjct: 622 GLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKF 681
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
++ I NT+ ++++ + E A +LFD + G+ + TY I L K + EA +F
Sbjct: 682 NIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMF 741
Query: 379 RTLRILKCELDIRAYNCLI 397
+ C R N +I
Sbjct: 742 SLMEKSGCAPSSRLLNYII 760
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 120/267 (44%), Gaps = 12/267 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + FN + L K +F + G PD+ T+N LI+ + +G++ F V
Sbjct: 506 PNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGV 565
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ + P+ V++ +LI G C RI + LF ++ G +P TY +++GL+
Sbjct: 566 LDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFN 625
Query: 135 TGHTIVALNLFEEMASGNGEFGVE--GFV----------DKAKELFLQMKDENINPDVVT 182
G T+ A + EM + G + D+A +F ++ N+ ++
Sbjct: 626 DGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAI 685
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
++I EAK L + G+ PN T+ V++ L K G ++EA + LM
Sbjct: 686 INTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLME 745
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRA 269
+ G P++ + N ++ G + +A
Sbjct: 746 KSGCAPSSRLLNYIIRVLLEKGEIVKA 772
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 115/288 (39%), Gaps = 48/288 (16%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IFD+++++ P V +FN L + + + S G+ PD+ +YN LI+ +
Sbjct: 530 IFDFVIHIGERPD-VITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGY 588
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM------------------ 104
C+ GR+ G ++ G +L P +T+ ++ GL + R +
Sbjct: 589 CRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDI 648
Query: 105 -----------------EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
EA A+F KL + N+ NT+I+ +Y+ A LF+
Sbjct: 649 STCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDS 708
Query: 148 MASGN-----GEFGV-------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
+++ +GV EG V++A +F M+ P +IR +
Sbjct: 709 ISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGE 768
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
+A + ++ + + T +++M + GK E +LL Q
Sbjct: 769 IVKAGNYMFKVDGKRISLEASTVSLLMALFSREGKYWEDVKLLPAKYQ 816
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 65/156 (41%), Gaps = 3/156 (1%)
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P YN LMD C T R LF G V SIL+ K + ++L
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176
Query: 308 Y-GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM--QRDGVAADTWTYRTFIDG 364
M G++PD + YNT+ L E + +RA L M + G + + TY T I G
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
L + + +A LF + D+ Y +ID L
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDAL 272
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 127/398 (31%), Positives = 203/398 (51%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N L K D + +F+++ PD+ TYN LINCFCK R+ F
Sbjct: 288 PDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEF 347
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + PN VT+++ I C E + EA F +R PN FTY +LI+ +
Sbjct: 348 LHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCK 407
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G+ AL L EE+ + V EG + +A+E+F M + + P+ T
Sbjct: 408 AGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQET 467
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+++ GF A + AK +L EM ++ ++P+++ + I+ LC +++EA L+ +
Sbjct: 468 YTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIK 527
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ NA +Y TLMD + +G+ A L M +G T +Y LI+G CK+ ++
Sbjct: 528 ESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQ 587
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ +G M G++P+V +Y L L + + E A KLFDEM G+ D Y I
Sbjct: 588 EAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALI 647
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
DG K+ + EA+ L + + ELD+ AY LI GL
Sbjct: 648 DGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGL 685
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/410 (31%), Positives = 196/410 (47%), Gaps = 15/410 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F M R P P S N L L+K D FK + + G+ ++TYNI+I+ C
Sbjct: 208 FLKMRKFRVFPKPR-SCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLC 266
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K G + + ++ + FTP+ VT+ SLI G + E +F +++ C+P+V
Sbjct: 267 KEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVI 326
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQ 170
TYN LIN + A EM + NG F EG + +A + F+
Sbjct: 327 TYNALINCFCKFERMPKAFEFLHEMKA-NGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVD 385
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M+ + P+ TYTS+I C A + EA L+ E++ G++ NVVT+ ++D LC+ G+
Sbjct: 386 MRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGR 445
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
M EA + M+ GV PN Y L+ GF + AK++ M+ + Y
Sbjct: 446 MKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGT 505
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
++ G C +E A L GE+ GI + VIY TL F+ Q A L +EM G
Sbjct: 506 ILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLG 565
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ A TY IDGLCK+ + EA+ F + + + ++ Y L+DGL
Sbjct: 566 LIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGL 615
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 189/408 (46%), Gaps = 13/408 (3%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
CIF+ M + P V ++N L C K + + + GL P++ TY+ I+
Sbjct: 311 CIFEQMKDA-DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDA 369
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
FCK G + + R TPN T+TSLI C + EA L ++ G + N
Sbjct: 370 FCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLN 429
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEM----ASGNGEFG---VEGFV-----DKAKELFL 169
V TY L++GL G A +F M + N E V GF+ + AK++
Sbjct: 430 VVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILK 489
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+MK++ I PD++ Y +++ G C + EAK L+ E+ + G+ N V + +MD K+G
Sbjct: 490 EMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSG 549
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+ EA LL+ M+ +G+ Y L+DG C +G V A F M +G V Y+
Sbjct: 550 QATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYT 609
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
L++G CKN E A L+ EML KG+ PD + Y L + ++ A L D M
Sbjct: 610 ALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEI 669
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
G+ D Y I GL + + +A L + D Y CLI
Sbjct: 670 GMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLI 717
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 188/388 (48%), Gaps = 14/388 (3%)
Query: 4 FDYMLNMRPS--PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
F+++ M+ + P V +++ K + F + L P+ +TY LI+
Sbjct: 345 FEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDA 404
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK G ++ ++ IL++ N VT+T+L+ GLC E R+ EA +F + G PN
Sbjct: 405 NCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPN 464
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMAS----------GNGEFGV--EGFVDKAKELFL 169
TY L++G + A ++ +EM G +G+ E +++AK L
Sbjct: 465 QETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIG 524
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
++K+ IN + V YT+++ + + EA LL EM+D G+ VT+ ++D LCK+G
Sbjct: 525 EIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSG 584
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+ EA M +IG++PN VY L+DG C AK+LF M G +Y+
Sbjct: 585 LVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYT 644
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
LI+G K+ ++ AL+L M+ G++ D+ Y L L QV++A L DEM
Sbjct: 645 ALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGK 704
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVEL 377
GV D Y I + EA+EL
Sbjct: 705 GVLPDEVVYMCLIKKYYALGKVDEALEL 732
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%)
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
EA ++M V P + N ++ L K G+ D + + M G++ + F YN +
Sbjct: 202 EEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIM 261
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+D C G + A+ LF M+ G T + +Y+ LI+G+ K ++ + ++ +M
Sbjct: 262 IDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADC 321
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
PDV+ YN L + ++ +AF+ EM+ +G+ + TY TFID CK + EA++
Sbjct: 322 DPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIK 381
Query: 377 LFRTLRILKCELDIRAYNCLIDG 399
F +R + + Y LID
Sbjct: 382 FFVDMRRVALTPNEFTYTSLIDA 404
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 56/136 (41%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + L L KN ++ LF + G+ PD Y LI+ K G + +
Sbjct: 603 PNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNL 662
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R++ + +T+LI GL ++ +A L ++ G P+ Y LI Y
Sbjct: 663 RDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYA 722
Query: 135 TGHTIVALNLFEEMAS 150
G AL L EMA
Sbjct: 723 LGKVDEALELQNEMAK 738
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 121/360 (33%), Positives = 190/360 (52%), Gaps = 24/360 (6%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
FD ML+ + SP + ++ L + +LF + S GL PD TY LI+ +C
Sbjct: 386 FDEMLSKKISPDYI-TYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYC 444
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K G + + F + +++ TPN VT+ +LI GLC + A L ++R G + NV
Sbjct: 445 KAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVC 504
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
YN+++NG+ + G+ A+ L +EM I+PD +TY
Sbjct: 505 IYNSMVNGICKAGNIEQAIKLMKEMEVAG-----------------------IDPDAITY 541
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
T+VI +C D ++A LL EM+D+G+QP VVTFNV+M+ C G +++ RLL M++
Sbjct: 542 TTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLE 601
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G+ P+A YNTLM C+ +N +++ M + G +Y+ILI G+CK + ++
Sbjct: 602 KGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKE 661
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A LY EM+ KG P V YN L ++ + A +LF+EM+ G+ AD Y F+D
Sbjct: 662 AWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVD 721
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 185/392 (47%), Gaps = 23/392 (5%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
++ R S P V S++ + L L + GL P+ YTYN +I CK+G+
Sbjct: 284 MDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGK 343
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
VL ++ P+ V +T+LI G + A F ++ P+ TY T
Sbjct: 344 SFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTT 403
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
LI G + G I NLF EM S + PD VTYT++I
Sbjct: 404 LIQGFGQGGKVIEPQNLFHEMIS-----------------------RGLKPDEVTYTTLI 440
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
+C A + A L EM+ G+ PN+VT+ ++D LCK+G++D A+ LLD M + G++
Sbjct: 441 DVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQ 500
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
N +YN++++G C G + +A +L ME G +Y+ +I+ YC+ +I+ A L
Sbjct: 501 LNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKL 560
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
EML +G++P VV +N L + +E +L M G+ D TY T + C
Sbjct: 561 LQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCI 620
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + ++++ +R D YN LI G
Sbjct: 621 RNSMNTTTKIYKRMRNQGVAPDSNTYNILIKG 652
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 177/347 (51%), Gaps = 14/347 (4%)
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
KM + +H + + + PN + F + L + EA L KL +G V
Sbjct: 171 KMTQFTHRLIYTYKY----WGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVD 226
Query: 124 TYNTLINGLYRTGHTI-VALNLFEE--MASGNGEFGV-------EGFVDKAKELFLQMKD 173
+ N ++ + I +A+ +F E ++ + + G V +A L +QM
Sbjct: 227 SCNAFLSRIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDF 286
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
+ PDVV+Y++VI G+C+ + +A L+ +M +G++PN T+N I+ LCK GK E
Sbjct: 287 RSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFE 346
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A ++L M+ + P+ VY TL+ GF G V A + F M S + +Y+ LI
Sbjct: 347 AEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQ 406
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
G+ + ++ +L+ EM+S+G+KPD V Y TL V + ++ AF L +EM + G+
Sbjct: 407 GFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTP 466
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ TY IDGLCK+ + A EL +R +L++ YN +++G+
Sbjct: 467 NIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGI 513
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 120/367 (32%), Positives = 201/367 (54%), Gaps = 13/367 (3%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G+ P++YTYNIL+ C GR+ V+G + + PNAVT+ +L+ C + A
Sbjct: 5 GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA 64
Query: 107 AALFTKLRVFG-CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------G 153
+ + +R G +PN+ T+N+++NGL + G A +F+EM
Sbjct: 65 ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLS 124
Query: 154 EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
+ G + ++ +F +M + PDVVT+TS+I C A + +A L+ +M ++G++
Sbjct: 125 GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRM 184
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
N VTF ++D CK G +D+A ++ M + G++P+ YN L++G+C GR++ A+EL
Sbjct: 185 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 244
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
ME+ V +YS +I+GYCK ++ A L +ML KG+ PD + Y++L L E
Sbjct: 245 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE 304
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
++ A +LF+ M + GV D +TY T IDG CK + +A+ L + D+ Y
Sbjct: 305 KRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTY 364
Query: 394 NCLIDGL 400
+ LI+GL
Sbjct: 365 SVLINGL 371
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 196/402 (48%), Gaps = 38/402 (9%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
+ P + +FN + L K + +F + GL PD+ +YN L++ +CK+G +
Sbjct: 77 AKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESL 136
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
V + + P+ VTFTSLI C + +A AL ++R G N T+ LI+G
Sbjct: 137 AVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDG- 195
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
F +GF+D A +M+ I P VV Y ++I G+C
Sbjct: 196 ----------------------FCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCK 233
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
+ A+ L+ EM + V+P+VVT++ I+ CK G +D A +L M++ GV P+A
Sbjct: 234 LGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT 293
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
Y++L+ G C R+N A ELF +M +G F+Y+ LI+G+CK +E ALSL+ EM+
Sbjct: 294 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 353
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR------------- 359
KG+ PDVV Y+ L L + + + A +L ++ + D Y
Sbjct: 354 RKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKS 413
Query: 360 --TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ G C + EA ++++++ +LD Y+ LI G
Sbjct: 414 VVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHG 455
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 174/335 (51%), Gaps = 13/335 (3%)
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
++R PN T+ L++ LCA R+ EA + +R GC PN TYNTL+ R G
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 138 TIVALNLFEEM-ASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYT 184
A + M GN + + G ++ A+++F +M E + PDVV+Y
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+++ G+C +E+ + EM +G+ P+VVTF ++ CK G +++A L+ M +
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G+R N + L+DGFC G ++ A M G +V Y+ LINGYCK ++ A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L EM +K +KPDVV Y+T+ ++ ++ AF+L +M + GV D TY + I G
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
LC+ + +A ELF + L + D Y LIDG
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDG 335
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 180/407 (44%), Gaps = 40/407 (9%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P V +F L K + + ++L ++ GL + T+ LI+ FCK G
Sbjct: 142 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 201
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ + + + + P+ V + +LI G C R+ A L ++ +P+V TY+T
Sbjct: 202 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 261
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
+I+G + G+ +D A +L +M + + PD +TY+S+I
Sbjct: 262 IISGYCKVGN-----------------------LDSAFQLNQKMLKKGVLPDAITYSSLI 298
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
RG C N+A L M+ GVQP+ T+ ++D CK G +++A L D MI+ GV
Sbjct: 299 RGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVL 358
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMES--------------MGCTHTVF-SYSILI 292
P+ Y+ L++G + R A L + + C+ F S L+
Sbjct: 359 PDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALL 418
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
G+C ++ A +Y ML + K D +Y+ L V +A +M R G +
Sbjct: 419 KGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFS 478
Query: 353 ADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL-DIRAYNCLID 398
++ + + + GL + +VEA + L + C L D A LID
Sbjct: 479 PNSTSTISLVRGLFEEGMVVEADNAIQDL-LTCCPLADAEASKALID 524
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 204/384 (53%), Gaps = 25/384 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V S+N L LA+ D + ++ + + + P++YT N ++N + KMG + + +
Sbjct: 179 VRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVS 238
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+I ++ +P++ T+TSLI G C + + A +F + GC N +Y T+I+GL G
Sbjct: 239 KIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAG 298
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+D+ LF +M++++ P V TYT +I + ND
Sbjct: 299 R-----------------------IDEGISLFKKMREDDCYPTVRTYTVIIHAL-FGNDR 334
Query: 197 N-EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
N E L EM ++ +PNV T+ V++D +CK K+DE+ R+L+ M++ G+ P+ YN
Sbjct: 335 NLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNA 394
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L+ G+C GR+ A E+ MES C +Y+ LI G+ K K + A++L +ML
Sbjct: 395 LIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESK 454
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ P +V YN+L V + + A+KL D ++ +G+ D WTY FID LCK+ + EA
Sbjct: 455 LTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEAC 514
Query: 376 ELFRTLRILKCELDIRAYNCLIDG 399
+LF +L+ + + Y LIDG
Sbjct: 515 DLFNSLKEKGIKANEVMYTALIDG 538
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 169/360 (46%), Gaps = 23/360 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ ++ L N + LF + P+++TY ++++ CK ++ +
Sbjct: 317 PTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRI 376
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+ VT+ +LI+G C E RI A + + C PN TYN LI G +
Sbjct: 377 LNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSK 436
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
H V KA L +M + + P +VTY S+I C A
Sbjct: 437 RKH-----------------------VHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAG 473
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
++ A LL + + G+ P+ T++V +D LCK+ +M+EA L + + + G++ N +Y
Sbjct: 474 HFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYT 533
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DG C G+++ A L M S C +Y+ LI G CK +++ LS+ M
Sbjct: 534 ALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKM 593
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+KP V Y L + + A ++F++M G D +TY FI C + + EA
Sbjct: 594 GVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEA 653
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 185/400 (46%), Gaps = 47/400 (11%)
Query: 45 STGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 104
GL PD +TY LI +C+ V+ + V + N V++T++I GLC RI
Sbjct: 242 QAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRID 301
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF---- 160
E +LF K+R C P V TY +I+ L+ + ++LF EM + E V +
Sbjct: 302 EGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMV 361
Query: 161 --------VDKAKELFLQMKDENINPDVVTYTSVIRGFCY-------------------- 192
+D+++ + +M ++ + P VVTY ++IRG+C
Sbjct: 362 DAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCR 421
Query: 193 --ANDWNEAKC-------------LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
+NE C LL +M++ + P++VT+N ++ CK G D A +L
Sbjct: 422 PNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKL 481
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
LDL+ + G+ P+ + Y+ +D C + R+ A +LF S++ G Y+ LI+G+CK
Sbjct: 482 LDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCK 541
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+I+ A+SL M S+ P+ YN+L + + +V+ + + M + GV T
Sbjct: 542 AGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVAT 601
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
Y I+ + + A +F + + D+ Y I
Sbjct: 602 YTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFI 641
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 169/387 (43%), Gaps = 23/387 (5%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V ++ ++ + K + D + + GL P + TYN LI +C+ GR+
Sbjct: 348 RSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEA 407
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+LG + + PN T+ LI G + +A L +K+ P++ TYN+LI+
Sbjct: 408 ALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIH 467
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
+ GH D A +L +K+ + PD TY+ I
Sbjct: 468 VQCKAGH-----------------------FDSAYKLLDLLKENGLVPDQWTYSVFIDTL 504
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C + EA L + ++G++ N V + ++D CK GK+DEA LL+ M PN+
Sbjct: 505 CKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNS 564
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
YN+L+ G C G+V + +M MG TV +Y+ILI + + + A ++ +
Sbjct: 565 STYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQ 624
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M+S G KPDV Y V+ A + M GV D+ TY I +
Sbjct: 625 MVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGL 684
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLI 397
+A + + + C+ +N LI
Sbjct: 685 AYDAFNVLKRMLDAGCDPSHPIWNNLI 711
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 91/187 (48%)
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
+V ++N ++ L + +DE R+ M+ + PN + NT+++ + G + A
Sbjct: 178 SVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYV 237
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
+ G + F+Y+ LI GYC+N ++ A ++ M +KG + + V Y T+ L E
Sbjct: 238 SKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEA 297
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
+++ LF +M+ D TY I L N +E ++LF +R CE ++ Y
Sbjct: 298 GRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTY 357
Query: 394 NCLIDGL 400
++D +
Sbjct: 358 TVMVDAM 364
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 208/427 (48%), Gaps = 52/427 (12%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ + ML+ R SP V ++N + L+K + D + + + + P+ +TYN +++
Sbjct: 31 YITYHEMLDRRVSPDAV-TYNSIIAALSKAQAMDRAMEVLTVM----VMPNCFTYNSIMH 85
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+C G+ + ++ P+ VT+ SL+ LC + EA +F + G +P
Sbjct: 86 GYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKP 145
Query: 121 NVFTYNTLINGLYRTG-----HTIVALNLFEEMASGNGEFGVE----------------- 158
++ TY TL++G G H ++AL + M + F +
Sbjct: 146 DITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVF 205
Query: 159 -------------------------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
G +D A F QM D+ + P+VV YTS+I C
Sbjct: 206 SKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTY 265
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+ W +A+ L+ E++DQG+ PN+V FN I+D LCK G++ E+ +L DL+ IGV P+ Y
Sbjct: 266 DKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITY 325
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
+TL+DG+CL G+++ A +L M S+G +YS LINGYCK +E AL+L+ EM S
Sbjct: 326 STLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMES 385
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
G+ PD++ YN + LF + A +L+ + G + TY + K + ++
Sbjct: 386 NGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAKTNSLMM 445
Query: 374 AVELFRT 380
FRT
Sbjct: 446 HFGCFRT 452
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 178/362 (49%), Gaps = 16/362 (4%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
PD+ +YN +I+ K G V ++ +L +P+AVT+ S+I L + A +
Sbjct: 9 PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------ 157
T + + PN FTYN++++G +G + A+ +F +M S E V
Sbjct: 69 LTVMVM----PNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124
Query: 158 EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
G +A+++F M + PD+ TY +++ G+ E LL M+ G+Q +
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHV 184
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
FN+++ K K+DE + M Q G+ PNA Y T++DG C GR++ A F M
Sbjct: 185 FNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMI 244
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
G T V Y+ LI+ C + E A L E+L +GI P++V +NT+ L + +V
Sbjct: 245 DKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVI 304
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ KLFD + GV D TY T IDG C + A++L + + + D Y+ LI
Sbjct: 305 ESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLI 364
Query: 398 DG 399
+G
Sbjct: 365 NG 366
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 154/329 (46%), Gaps = 51/329 (15%)
Query: 118 CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAK 165
C P+V +YNT+I+GL++ G A + EM +D+A
Sbjct: 7 CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM 66
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
E+ M + P+ TY S++ G+C + +A + +M G++P+VVT+N +MD L
Sbjct: 67 EVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYL 122
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG--------------------- 264
CKNGK EA ++ D M++ G++P+ Y TL+ G+ G
Sbjct: 123 CKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDH 182
Query: 265 --------------RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
+V+ +F M G T +Y +I+G CK ++ A+ + +
Sbjct: 183 HVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQ 242
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M+ KG+ P+VV+Y +L L + E+A +L E+ G+ + + T +D LCK
Sbjct: 243 MIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGR 302
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDG 399
++E+ +LF L + D+ Y+ LIDG
Sbjct: 303 VIESKKLFDLLGHIGVNPDVITYSTLIDG 331
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 122/258 (47%), Gaps = 39/258 (15%)
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
PDVV+Y ++I G D ++A EM+D+ V P+ VT+N I+ L K MD A +
Sbjct: 9 PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
L +M V PN F YN++M G+C +G+ +A +F M S G V +Y+ L++ CK
Sbjct: 69 LTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFV------VLFEIH----------------- 334
N + A ++ M+ +G+KPD+ Y TL L E+H
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHV 184
Query: 335 ------------QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
+V+ +F +M++ G+ + YRT IDGLCK + +A+ F +
Sbjct: 185 FNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMI 244
Query: 383 ILKCELDIRAYNCLIDGL 400
++ Y LI L
Sbjct: 245 DKGLTPNVVVYTSLIHAL 262
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 199/387 (51%), Gaps = 28/387 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N+L K + L L R++ + PD+ TYN ++ C G++ V
Sbjct: 178 PDVITYNVLISGYCKTGEIGSALQLLDRMSVS---PDVVTYNTILRTLCDSGKLKEAMEV 234
Query: 75 LGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
L R + R C+ P+ +T+T LI+ C ES + +A L ++R GC+P+V TYN LING+
Sbjct: 235 LDRQMQRECY-PDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGIC 293
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ EG +D+A M P+V+T+ ++R C
Sbjct: 294 K-----------------------EGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCST 330
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
W +A+ L EM+ +G P+VVTFN++++ LC+ G + A +L+ M Q G PN+ Y
Sbjct: 331 GRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSY 390
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N L+ C ++ RA E M S GC + +Y+ L+ CK+ +++ A+ + ++ S
Sbjct: 391 NPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGS 450
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG P ++ YNT+ L ++ + + A KL DEM+ G+ D TY T + GL + + E
Sbjct: 451 KGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDE 510
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A+ F L + + + YN ++ GL
Sbjct: 511 AIAFFHDLEEMGVKPNAITYNSIMLGL 537
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 195/399 (48%), Gaps = 28/399 (7%)
Query: 4 FDYMLNM--RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
F ++ +M R P + + L L K + + L +G PD+ TYN+LI+
Sbjct: 130 FKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISG 189
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
+CK G + +L R+ +P+ VT+ ++++ LC ++ EA + + C P+
Sbjct: 190 YCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPD 246
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
V TY LI + E V +A +L +M+D+ PDVV
Sbjct: 247 VITYTILIEATCK-----------------------ESGVGQAMKLLDEMRDKGCKPDVV 283
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY +I G C +EA L M G QPNV+T N+I+ +C G+ +A + L M
Sbjct: 284 TYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEM 343
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
I+ G P+ +N L++ C G + RA ++ M GCT SY+ L++ CK+K++
Sbjct: 344 IRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKM 403
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A+ M+S+G PD+V YNTL L + +V+ A ++ +++ G + TY T
Sbjct: 404 ERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTV 463
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
IDGL K +A++L ++ + DI Y+ L+ GL
Sbjct: 464 IDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGL 502
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 173/344 (50%), Gaps = 9/344 (2%)
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
G + GF L ++ P+ + TSLI+GLC + +A + L G P+V TY
Sbjct: 124 GELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITY 183
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGNG---------EFGVEGFVDKAKELFLQMKDENI 176
N LI+G +TG AL L + M+ G + +A E+ +
Sbjct: 184 NVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQREC 243
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
PDV+TYT +I C + +A LL EM D+G +P+VVT+NV+++ +CK G++DEA R
Sbjct: 244 YPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIR 303
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
L+ M G +PN +N ++ C TGR A++ M GC+ +V +++ILIN C
Sbjct: 304 FLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLC 363
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
+ I A+ + +M G P+ + YN L L + ++ERA + D M G D
Sbjct: 364 RKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIV 423
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY T + LCK+ + AVE+ L C + YN +IDGL
Sbjct: 424 TYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGL 467
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 175/387 (45%), Gaps = 12/387 (3%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
+L+ P V ++N + L + + + R +PD+ TY ILI CK
Sbjct: 202 LLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKES 261
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
V +L + P+ VT+ LI G+C E R+ EA + +GC+PNV T+N
Sbjct: 262 GVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHN 321
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDE 174
++ + TG + A EM V +G + +A ++ +M
Sbjct: 322 IILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQH 381
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
P+ ++Y ++ C A L M+ +G P++VT+N ++ LCK+GK+D A
Sbjct: 382 GCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVA 441
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+L+ + G P YNT++DG G+ + A +L M+ G + +YS L+ G
Sbjct: 442 VEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGG 501
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
+ +++ A++ + ++ G+KP+ + YN++ + L + Q RA M G
Sbjct: 502 LSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPT 561
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTL 381
+Y I+GL EA+EL L
Sbjct: 562 ETSYMILIEGLAYEGLAKEALELLNEL 588
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 164/353 (46%), Gaps = 12/353 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ IL K + L + G PD+ TYN+LIN CK GR+
Sbjct: 245 PDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRF 304
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + PN +T +++ +C+ R M+A ++ GC P+V T+N LIN L R
Sbjct: 305 LNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCR 364
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G A+++ E+M + +++A E M PD+VT
Sbjct: 365 KGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVT 424
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++ C + A +L ++ +G P ++T+N ++D L K GK D+A +LLD M
Sbjct: 425 YNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMK 484
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G++P+ Y+TL+ G G+V+ A F +E MG +Y+ ++ G CK ++
Sbjct: 485 GKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTV 544
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
A+ M+++G KP Y L L + A +L +E+ GV +
Sbjct: 545 RAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKS 597
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 101/186 (54%), Gaps = 5/186 (2%)
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
V N + L +NG+++E + L+ M+ G P+ +L+ G C TG+ +A +
Sbjct: 111 VENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEI 170
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
+E G V +Y++LI+GYCK EI AL L M + PDVV YNT+ L + +
Sbjct: 171 LEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGK 227
Query: 336 VERAFKLFD-EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
++ A ++ D +MQR+ D TY I+ CK S + +A++L +R C+ D+ YN
Sbjct: 228 LKEAMEVLDRQMQRE-CYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYN 286
Query: 395 CLIDGL 400
LI+G+
Sbjct: 287 VLINGI 292
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
L + P + ++N + L+K D + L + GL PD+ TY+ L+ + G+
Sbjct: 448 LGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGK 507
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V + PNA+T+ S++ GLC + + A + GC+P +Y
Sbjct: 508 VDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMI 567
Query: 128 LINGLYRTGHTIVALNLFEEMAS 150
LI GL G AL L E+ S
Sbjct: 568 LIEGLAYEGLAKEALELLNELCS 590
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/397 (34%), Positives = 205/397 (51%), Gaps = 25/397 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLN---STGLF--PDLYTYNILINCFCKMGRVS 69
P V +F IL L K + D L +F+++N S G PD+ TYN LI+ CK+GR
Sbjct: 338 PNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQE 397
Query: 70 HGFVVLGRILRS---CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
G ++ R +RS C PN VT+ LI G C S I A LF ++ G PNV T N
Sbjct: 398 EGLGLVER-MRSQPRCM-PNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLN 455
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFG--------VEGF-----VDKAKELFLQMKD 173
TL++G+ + G A+ F EM G G G + F ++KA ELF +M +
Sbjct: 456 TLVDGMCKHGRINGAVEFFNEM-QGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLE 514
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
+PD + Y ++I G A + A +L +M + G P++V+FNV+++ C+ K+DE
Sbjct: 515 AGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDE 574
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A +L M G++P+ YNTL+ F TG + A L M G TV +Y LI+
Sbjct: 575 AYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIH 634
Query: 294 GYCKNKEIEGALSLYGEMLSKG-IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
YC N ++ A+ ++ +M S + P+ VIYN L L +QV+ A L D+M+ GV
Sbjct: 635 AYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVK 694
Query: 353 ADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
+T T+ GL + +++ +A EL + C D
Sbjct: 695 PNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPD 731
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 211/459 (45%), Gaps = 61/459 (13%)
Query: 3 IFDYMLNMRPS-PPPVCSFNILFGCLAKNKHY------DTVLSLFKRLNSTGLFPDLYTY 55
+ D ML + PP + +I+F L+K + ++ L + +FP+
Sbjct: 214 LLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWL 273
Query: 56 NILINCFCKMGR------VSHGFVVLGRILR--SC------------------------- 82
LI+ C+ GR V HG + LG ++ SC
Sbjct: 274 TQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKE 333
Query: 83 --FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV-----FGCEPNVFTYNTLINGLYRT 135
PN VTF LI LC R+ EA +F K+ F EP+V TYNTLI+GL +
Sbjct: 334 MDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKV 393
Query: 136 GHTIVALNLFEEMASGNGEFG--------VEGF-----VDKAKELFLQMKDENINPDVVT 182
G L L E M S ++G+ ++ A+ELF QM + + P+VVT
Sbjct: 394 GRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVT 453
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+++ G C N A EM +G++ N VT+ ++ C +++A L D M+
Sbjct: 454 LNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEML 513
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G P+A VY TL+ G G+++RA + M+ G + + S+++LING+C+ +++
Sbjct: 514 EAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLD 573
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A + EM + GIKPD V YNTL + A +L +M ++G+ TY I
Sbjct: 574 EAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALI 633
Query: 363 DGLCKNSYIVEAVELFRTL-RILKCELDIRAYNCLIDGL 400
C N + EA+++FR + K + YN LI+ L
Sbjct: 634 HAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSL 672
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 189/430 (43%), Gaps = 67/430 (15%)
Query: 33 YDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVL----------------- 75
++ +L LFK S + + +LI CF + V F+V
Sbjct: 140 HNKLLDLFKTSKSHKIPLSVNAATLLIRCFGRAQMVDESFLVYNELCPSRRLTHIRNILI 199
Query: 76 ------GRI------------LRSCFTPNA----VTFTSLIK-----GLCAESRIMEAAA 108
GR+ ++ F PN+ + F++L K E I+ +
Sbjct: 200 DVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVS 259
Query: 109 LFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE---------EMASGNGEFGVEG 159
F + VF PN LI+ L R+G T A ++ E AS N G
Sbjct: 260 KFAEHEVF---PNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALG 316
Query: 160 FVDKAKE---LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG------ 210
+ K L +MK+ +I P+VVT+ +I C +EA + E M+ G
Sbjct: 317 RAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEA-LEVFEKMNGGESNGFL 375
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLM-IQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
V+P+V+T+N ++D LCK G+ +E L++ M Q PN YN L+DG+C + A
Sbjct: 376 VEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAA 435
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
+ELF M G V + + L++G CK+ I GA+ + EM KG+K + V Y L
Sbjct: 436 RELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRA 495
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
++ +E+A +LFDEM G + D Y T I GL + + A + ++ D
Sbjct: 496 FCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPD 555
Query: 390 IRAYNCLIDG 399
I ++N LI+G
Sbjct: 556 IVSFNVLING 565
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 160/364 (43%), Gaps = 60/364 (16%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M N PP V + N L + K+ + + F + GL + TY LI F
Sbjct: 438 LFDQM-NKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAF 496
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C + + + +L + +P+A+ + +LI GL ++ A+ + +K++ G P++
Sbjct: 497 CNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDI 556
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
++N LING R +D+A E+ +M++ I PD VT
Sbjct: 557 VSFNVLINGFCRKNK-----------------------LDEAYEMLKEMENAGIKPDGVT 593
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DLM 241
Y ++I F D++ A L+ +M+ +G+ P VVT+ ++ C NG +DEA ++ D+
Sbjct: 594 YNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMS 653
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
V PN +YN L++ C + ++
Sbjct: 654 STSKVPPNTVIYNILINSLC-----------------------------------RKNQV 678
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ ALSL +M KG+KP+ +N +F L E + + +AF+L D M D T
Sbjct: 679 DLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEIL 738
Query: 362 IDGL 365
+ L
Sbjct: 739 TEWL 742
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 13/257 (5%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
+ + LF + G PD Y LI+ + G++ VL ++ + F+P+ V+F L
Sbjct: 503 EKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVL 562
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN- 152
I G C ++++ EA + ++ G +P+ TYNTLI+ +TG A L ++M
Sbjct: 563 INGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGL 622
Query: 153 -----------GEFGVEGFVDKAKELFLQMKD-ENINPDVVTYTSVIRGFCYANDWNEAK 200
+ + G +D+A ++F M + P+ V Y +I C N + A
Sbjct: 623 VPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLAL 682
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
L+ +M +GV+PN TFN + L + + +A L+D M + P+ L +
Sbjct: 683 SLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWL 742
Query: 261 CLTGRVNRAKELFVSME 277
G + K E
Sbjct: 743 SAVGETAKLKSFVQGYE 759
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG-LFPDLYTYNILINCFCKMGRVSHGFV 73
P V ++ L N + D + +F+ ++ST + P+ YNILIN C+ +V
Sbjct: 624 PTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALS 683
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
++ + PN TF ++ KGL ++ + +A L ++ C P+ T L L
Sbjct: 684 LMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLS 743
Query: 134 RTGHT 138
G T
Sbjct: 744 AVGET 748
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 41/97 (42%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF M + PP +NIL L + D LSL + G+ P+ T+N +
Sbjct: 648 IFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGL 707
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
+ +S F ++ R+ P+ +T L + L A
Sbjct: 708 QEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSA 744
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 202/385 (52%), Gaps = 23/385 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +N + L+K D + +++ L + + P++YT+N ++N +CK+G V +
Sbjct: 157 PTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELY 216
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+I+++ P+ T+TSLI G C + A +F + GC+ N +Y LI+GL
Sbjct: 217 ASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCE 276
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G +++A +LF M ++N P V TYT +I +
Sbjct: 277 AGR-----------------------INEALKLFADMTEDNCCPTVRTYTVLIYALSGSG 313
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EA L EM ++G +PNV T+ V++D LCK KMDEA ++L M + G+ P+ YN
Sbjct: 314 RKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYN 373
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DG+C G ++ A E+ MES C +Y+ LI G CK +++ A++L +ML +
Sbjct: 374 ALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
+ P ++ YN+L +++ +E A++L M +G+ D WTY FID LCK + EA
Sbjct: 434 KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEA 493
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
LF +++ + + Y LIDG
Sbjct: 494 GTLFDSVKAKGVKANEVIYTALIDG 518
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 184/385 (47%), Gaps = 23/385 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ +L L+ + L+LF + G P+++TY +LI+ CK ++ +
Sbjct: 297 PTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKM 356
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P+ VT+ +LI G C E I +A + + C PN TYN LI GL +
Sbjct: 357 LSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCK 416
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
V KA L +M + ++P ++TY S+I G C N
Sbjct: 417 KRK-----------------------VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVN 453
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
D A LL M + G+ P+ T++V +D LCK G+++EA L D + GV+ N +Y
Sbjct: 454 DLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYT 513
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DG+C G+++ A L M + C ++Y++LI G CK K+++ A SL +ML+
Sbjct: 514 ALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTM 573
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+KP VV Y L + + + A K+F+ M G D TY F+ + E
Sbjct: 574 GVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEV 633
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
++ + D+ Y LIDG
Sbjct: 634 DDVIAKMNEEGILPDLVTYTVLIDG 658
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 172/386 (44%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ +L L K D + ++ GL P + TYN LI+ +CK G + F +
Sbjct: 332 PNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEI 391
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + PN T+ LI GLC + ++ +A AL K+ P++ TYN+LI+G +
Sbjct: 392 LDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCK 451
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
++ A L M + + PD TY+ I C
Sbjct: 452 VND-----------------------LESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEG 488
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EA L + +GV+ N V + ++D CK GK+D A LL+ M+ PN++ YN
Sbjct: 489 RVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYN 548
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L++G C ++ A L M +MG TV +Y+ILI K+ + AL ++ M+S
Sbjct: 549 VLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSL 608
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G +PDV Y F +E + +M +G+ D TY IDG + A
Sbjct: 609 GYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRA 668
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ + + C+ + + LI L
Sbjct: 669 FDFLKCMVDTGCKPSLYIVSILIKNL 694
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 184/398 (46%), Gaps = 18/398 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++++ L K + +LF + + G+ + Y LI+ +CK+G++ + +
Sbjct: 472 PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSL 531
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R+L PN+ T+ LI+GLC E ++ EA++L K+ G +P V TY LI + +
Sbjct: 532 LERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLK 591
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G AL +F M S + V +G +++ ++ +M +E I PD+VT
Sbjct: 592 DGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVT 651
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT +I G+ + A L M+D G +P++ ++++ L +M E
Sbjct: 652 YTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRS------ 705
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+IG+ + V + + T A +LF M GCT V Y LI G+C+ + +E
Sbjct: 706 EIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLE 765
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L M +G+ P IYN+L ++ A +L D M +G+ +Y+ +
Sbjct: 766 EAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLV 825
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GL +A +F L D A+ LIDGL
Sbjct: 826 CGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGL 863
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 146/338 (43%), Gaps = 42/338 (12%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ + + MLN P ++N+L L K K SL ++ + G+ P + TY ILI
Sbjct: 529 YSLLERMLN-DACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIG 587
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
K G H V ++ + P+ T+T+ + ++ + E + K+ G P
Sbjct: 588 EMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILP 647
Query: 121 NVFTYNTLINGLYRTGHT-----------------------IVALNLFEE--MASGNGEF 155
++ TY LI+G R G T I+ NL E M E
Sbjct: 648 DLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEI 707
Query: 156 GVEGF-----VDKAK-----------ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
G++ VD A +LF +M + DV Y ++I GFC EA
Sbjct: 708 GIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEA 767
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
+ L+ M ++G+ P+ +N ++D CK G EA RL+D M++ G+ P Y L+ G
Sbjct: 768 QGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCG 827
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
+ G +AK +F + S G + ++ +LI+G K
Sbjct: 828 LYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLK 865
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 95/190 (50%), Gaps = 2/190 (1%)
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
+P + +N I+ L K +DE + ++ + PN + +N +++G+C G V A E
Sbjct: 156 KPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEA-E 214
Query: 272 LFVS-MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
L+ S + G F+Y+ LI G+C+NK ++ A ++ M KG + + V Y L L
Sbjct: 215 LYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGL 274
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
E ++ A KLF +M D TY I L + VEA+ LF ++ CE ++
Sbjct: 275 CEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNV 334
Query: 391 RAYNCLIDGL 400
Y LIDGL
Sbjct: 335 HTYTVLIDGL 344
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/400 (32%), Positives = 207/400 (51%), Gaps = 28/400 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFG--CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+F ML + SP V ++NIL CLA N D L F R+ G P++ TYN LI+
Sbjct: 192 VFKEMLQSQVSPN-VFTYNILIRGFCLAGN--LDVALRFFDRMEKKGCLPNVVTYNTLID 248
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+CK+ ++ GF +L + PN +++ +I GLC E R+ E + + T++ G
Sbjct: 249 GYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSL 308
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
+ TYNTLI G + G+ AL + EM ++P V
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLR-----------------------HGLSPSV 345
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+TYTS+I C A + N A L +M +G+ PN T+ ++D + G M+EA R+L
Sbjct: 346 ITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKE 405
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
MI G P+ YN L++G C+ G++ A + M+ G T V SYS +++G+C++ +
Sbjct: 406 MIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYD 465
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
++ AL + +M++KGIKPD + Y++L E + + A LFDEM R G+ D +TY
Sbjct: 466 VDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTA 525
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I+ C + +A++L + D+ Y+ LI+GL
Sbjct: 526 LINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGL 565
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 205/412 (49%), Gaps = 27/412 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L K + D L + + GL P+L +YN++IN C+ GR+ V
Sbjct: 238 PNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFV 297
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + ++ + VT+ +LIKG C E +A + ++ G P+V TY +LI+ + +
Sbjct: 298 LTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCK 357
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G+ A ++M F +G++++A + +M D +P VVT
Sbjct: 358 AGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVT 417
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G C A +A +L +M ++G+ P+VV+++ ++ C++ +DEA R+ M+
Sbjct: 418 YNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMV 477
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G++P+ Y++L+ GFC R A +LF M +G F+Y+ LIN YC +++
Sbjct: 478 AKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQ 537
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ L+ EM+ KG+ PDVV Y+ L L + + A +L ++ + TY T I
Sbjct: 538 KAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLI 597
Query: 363 D---------------GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ G C + EA ++F ++ + D AYN +I G
Sbjct: 598 ENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHG 649
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 138/287 (48%), Gaps = 24/287 (8%)
Query: 114 RVFGCEPNVFTYNTLINGLYRTGHTIV-ALNLFEEMASGNGEFGVEGFVDKAKELFLQMK 172
+ G P V +YN +++ R+ I A N+F+EM LQ +
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM--------------------LQSQ 200
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 232
++P+V TY +IRGFC A + + A M +G PNVVT+N ++D CK K+D
Sbjct: 201 ---VSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKID 257
Query: 233 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
+ LL M G+ PN YN +++G C GR+ + M G + +Y+ LI
Sbjct: 258 DGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLI 317
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
GYCK AL ++ EML G+ P V+ Y +L + + + RA + D+M+ G+
Sbjct: 318 KGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLC 377
Query: 353 ADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ TY T +DG + Y+ EA + + + + YN LI+G
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALING 424
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 141/335 (42%), Gaps = 33/335 (9%)
Query: 15 PPVCSFNILFG--CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
P V ++N L C+A K D + ++ + + GL PD+ +Y+ +++ FC+ V
Sbjct: 413 PSVVTYNALINGHCIA-GKMVDAI-AVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
V +++ P+ +T++SLI+G C + R EA LF ++ G P+ FTY LIN
Sbjct: 471 RVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAY 530
Query: 133 YRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPD 179
G A+ L EM NG + +AK L L++ E P
Sbjct: 531 CMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLING-LNKQARTREAKRLLLKLFYEESVPS 589
Query: 180 VVTY---------------TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
VTY S+I+GFC EA + M+++ +P+ +NV++
Sbjct: 590 DVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHG 649
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
C+ G + +A L M++ G + L+ G+VN + ++
Sbjct: 650 HCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSE 709
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
+L+ + ++ L + EM G P+
Sbjct: 710 AEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 23/242 (9%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD ML + PP ++ L + L + G+ PD+ TY++LIN
Sbjct: 507 LFDEMLRV-GLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGL 565
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTF---------------TSLIKGLCAESRIMEAA 107
K R +L ++ P+ VT+ SLIKG C + + EA
Sbjct: 566 NKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEAD 625
Query: 108 ALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKEL 167
+F + +P+ YN +I+G R G A +L++EM + K L
Sbjct: 626 QVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTL 685
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
+ K +N + +V+R C ++ +AK +L+E+ + +VV ++ E+ K
Sbjct: 686 HKEGKVNELNSVIA---NVLRS-CELSEAEQAK-VLVEINHREGNMDVVL--DVLAEMAK 738
Query: 228 NG 229
+G
Sbjct: 739 DG 740
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 36/156 (23%)
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV------------ 328
C T + +++ Y + I+ ALS+ + G P V+ YN +
Sbjct: 130 CNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFA 189
Query: 329 --VLFEIHQ----------------------VERAFKLFDEMQRDGVAADTWTYRTFIDG 364
V E+ Q ++ A + FD M++ G + TY T IDG
Sbjct: 190 ENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDG 249
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
CK I + EL R++ + E ++ +YN +I+GL
Sbjct: 250 YCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGL 285
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 186/361 (51%), Gaps = 23/361 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++++L L K + L + + + G PD+ TY IL++ CK +V+ + V
Sbjct: 111 PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEV 170
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L + PN VT+ SL+ GLC R+ +A AL + GC PNV TY TLI+GL +
Sbjct: 171 LREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCK 230
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G V A + M D+ PD++ Y +I G C A+
Sbjct: 231 VGR-----------------------VKDACAMLADMIDKGGTPDLMIYNMLINGLCKAD 267
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+E+ LL + G++P+VVT++ ++ LC++ ++DEA RLL + G P+ +Y+
Sbjct: 268 QVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYS 327
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+DG C G+V+ A +L+ M GC V +YS LI+G CK ++ A L M+
Sbjct: 328 TLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRM 387
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G P + YN+L L +++ ++ A +L +EM+R A TY I G+C+ + A
Sbjct: 388 GTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSA 447
Query: 375 V 375
Sbjct: 448 A 448
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 126/398 (31%), Positives = 204/398 (51%), Gaps = 26/398 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F ML+ R V SFNIL L + +T L F++++ P++ TY++LI+
Sbjct: 67 LFQEMLDRRSHD--VISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSVLIDGL 123
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK RVS +L + +P+ +T+T L+ GLC ES++ A + ++ GC PN+
Sbjct: 124 CKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNL 183
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TYN+L++GL R AL L +M P+VVT
Sbjct: 184 VTYNSLLHGLCRARRVSDALALMRDMTC-----------------------RGCTPNVVT 220
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G C +A +L +M+D+G P+++ +N++++ LCK ++DE+ LL +
Sbjct: 221 YGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAV 280
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G++P+ Y++++ G C + R++ A L + ++S GC V YS LI+G CK +++
Sbjct: 281 SGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVD 340
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A LY M G DVV Y+TL L + +V+ A L M R G T TY + I
Sbjct: 341 EAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLI 400
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GLC +++ EA+EL + C YN LI G+
Sbjct: 401 KGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGM 438
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 121/361 (33%), Positives = 180/361 (49%), Gaps = 45/361 (12%)
Query: 85 PNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNL 144
PN VT+ SLI GLC + A LF ++ C P++ TYNTL++GL+RTG A+ L
Sbjct: 8 PNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMAL 67
Query: 145 FEEM-------------------ASGNGEFGVEGF------------------------- 160
F+EM +G E +E F
Sbjct: 68 FQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLIDGLCKAN 127
Query: 161 -VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 219
V +A EL MK +PDV+TYT ++ G C + A +L EM+D G PN+VT+N
Sbjct: 128 RVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYN 187
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
++ LC+ ++ +A L+ M G PN Y TL+DG C GRV A + M
Sbjct: 188 SLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDK 247
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G T + Y++LING CK +++ +++L +S GIKPDVV Y+++ L ++++ A
Sbjct: 248 GGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEA 307
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+L ++ G D Y T IDGLCK + EA +L+ + C+ D+ Y+ LIDG
Sbjct: 308 CRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDG 367
Query: 400 L 400
L
Sbjct: 368 L 368
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 109/334 (32%), Positives = 163/334 (48%), Gaps = 47/334 (14%)
Query: 113 LRVFGCEPNV-----------------------------------FTYNTLINGLYRTGH 137
+R GCEPNV TYNTL++GL+RTG
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 138 TIVALNLFEEMASGNGEFGVE-----------GFVDKAKELFLQMKDENINPDVVTYTSV 186
A+ LF+EM + G ++ A E F +M D+ +P+V+TY+ +
Sbjct: 61 LERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKM-DDRCSPNVITYSVL 119
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G C AN ++A LL M +G P+V+T+ +++D LCK K+ A +L M+ G
Sbjct: 120 IDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGC 179
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
PN YN+L+ G C RV+ A L M GCT V +Y LI+G CK ++ A +
Sbjct: 180 VPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACA 239
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
+ +M+ KG PD++IYN L L + QV+ + L G+ D TY + I GLC
Sbjct: 240 MLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLC 299
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+++ + EA L ++ C D+ Y+ LIDGL
Sbjct: 300 RSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGL 333
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 128/286 (44%), Gaps = 49/286 (17%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V ++ L L K ++ + G PDL YN+LIN CK +V
Sbjct: 212 RGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDE 271
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+L R + P+ VT++S+I GLC +R+ EA L ++ GC P+V Y+TLI+
Sbjct: 272 SIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLID 331
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINP 178
GL + G A +L+E M + V G VD+A L +M P
Sbjct: 332 GLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPP 391
Query: 179 DVVTYTSVIRGFCYANDWNEA----------KC--------LLI---------------- 204
+TY S+I+G C N +EA C +LI
Sbjct: 392 STMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDY 451
Query: 205 --EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL-LDLMIQIGVR 247
EM+D GV P+ +T++++++ L K+ + E L LD M+Q+G R
Sbjct: 452 FQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLGYR 497
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 202/385 (52%), Gaps = 23/385 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +N + L+K D + +++ L + + P++YT+N ++N +CK+G V +
Sbjct: 157 PTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELY 216
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+I+++ P+ T+TSLI G C + A +F + GC+ N +Y LI+GL
Sbjct: 217 ASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCE 276
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G +++A +LF M ++N P V TYT +I +
Sbjct: 277 AGR-----------------------INEALKLFADMTEDNCCPTVRTYTVLIYALSGSG 313
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EA L EM ++G +PNV T+ V++D LCK KMDEA ++L M + G+ P+ YN
Sbjct: 314 RKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYN 373
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DG+C G ++ A E+ MES C +Y+ LI G CK +++ A++L +ML +
Sbjct: 374 ALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
+ P ++ YN+L +++ +E A++L M +G+ D WTY FID LCK + EA
Sbjct: 434 KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEA 493
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
LF +++ + + Y LIDG
Sbjct: 494 GTLFDSVKAKGVKANEVIYTALIDG 518
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 184/385 (47%), Gaps = 23/385 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ +L L+ + L+LF + G P+++TY +LI+ CK ++ +
Sbjct: 297 PTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKM 356
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P+ VT+ +LI G C E I +A + + C PN TYN LI GL +
Sbjct: 357 LSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCK 416
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
V KA L +M + ++P ++TY S+I G C N
Sbjct: 417 KRK-----------------------VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVN 453
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
D A LL M + G+ P+ T++V +D LCK G+++EA L D + GV+ N +Y
Sbjct: 454 DLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYT 513
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DG+C G+++ A L M + C ++Y++LI G CK K+++ A SL +ML+
Sbjct: 514 ALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTM 573
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+KP VV Y L + + + A K+F+ M G D TY F+ + E
Sbjct: 574 GVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEV 633
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
++ + D+ Y LIDG
Sbjct: 634 DDVIAKMNEEGILPDLVTYTVLIDG 658
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 172/386 (44%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ +L L K D + ++ GL P + TYN LI+ +CK G + F +
Sbjct: 332 PNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEI 391
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + PN T+ LI GLC + ++ +A AL K+ P++ TYN+LI+G +
Sbjct: 392 LDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCK 451
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
++ A L M + + PD TY+ I C
Sbjct: 452 VND-----------------------LESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEG 488
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EA L + +GV+ N V + ++D CK GK+D A LL+ M+ PN++ YN
Sbjct: 489 RVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYN 548
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L++G C ++ A L M +MG TV +Y+ILI K+ + AL ++ M+S
Sbjct: 549 VLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSL 608
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G +PDV Y F +E + +M +G+ D TY IDG + A
Sbjct: 609 GYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRA 668
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ + + C+ + + LI L
Sbjct: 669 FDFLKCMVDTGCKPSLYIVSILIKNL 694
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 180/420 (42%), Gaps = 30/420 (7%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P + ++N L K ++ L +N GL PD +TY++ I+ CK GRV
Sbjct: 433 RKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEE 492
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ + N V +T+LI G C +I A +L ++ C PN +TYN LI
Sbjct: 493 AGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIE 552
Query: 131 GLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINP 178
GL + A +L +M + GE +G D A ++F M P
Sbjct: 553 GLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQP 612
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
DV TYT+ + + E ++ +M ++G+ P++VT+ V++D + G A L
Sbjct: 613 DVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFL 672
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK------------------ELFVSMESMG 280
M+ G +P+ ++ + L+ R+ + +LF M G
Sbjct: 673 KCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHG 732
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
CT V Y LI G+C+ + +E A L M +G+ P IYN+L ++ A
Sbjct: 733 CTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAV 792
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+L D M +G+ +Y+ + GL +A +F L D A+ LIDGL
Sbjct: 793 RLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGL 852
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 191/416 (45%), Gaps = 30/416 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++++ L K + +LF + + G+ + Y LI+ +CK+G++ + +
Sbjct: 472 PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSL 531
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R+L PN+ T+ LI+GLC E ++ EA++L K+ G +P V TY LI + +
Sbjct: 532 LERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLK 591
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G AL +F M S + V +G +++ ++ +M +E I PD+VT
Sbjct: 592 DGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVT 651
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE--------- 233
YT +I G+ + A L M+D G +P++ ++++ L +M E
Sbjct: 652 YTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDS 711
Query: 234 ---------ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
A +L + M++ G + +Y L+ GFC R+ A+ L M+ G + +
Sbjct: 712 VSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPS 771
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
Y+ L++ CK A+ L M+ G+ P + Y L L+ E+A +F
Sbjct: 772 EDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFH 831
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ G D ++ IDGL K + E EL + C+ + Y+ LI+GL
Sbjct: 832 GLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 92/189 (48%)
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
+P + +N I+ L K +DE + ++ + PN + +N +++G+C G V A+
Sbjct: 156 KPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAEL 215
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
+ G F+Y+ LI G+C+NK ++ A ++ M KG + + V Y L L
Sbjct: 216 YASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLC 275
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIR 391
E ++ A KLF +M D TY I L + VEA+ LF ++ CE ++
Sbjct: 276 EAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVH 335
Query: 392 AYNCLIDGL 400
Y LIDGL
Sbjct: 336 TYTVLIDGL 344
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 53/130 (40%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
+ + R P +N L C K Y + L + GL P L +Y +L+
Sbjct: 761 HHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIE 820
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
G V +L + + V + LI GL + E + L + GC+PN TY
Sbjct: 821 GSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTY 880
Query: 126 NTLINGLYRT 135
+ LI GL RT
Sbjct: 881 SLLIEGLERT 890
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/399 (33%), Positives = 202/399 (50%), Gaps = 16/399 (4%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + N + CLA+ + + LF++L + P+++T+NI+I+ CK G ++
Sbjct: 160 PPNTRTCNHILLCLARERSSELAWRLFEQLPA----PNVFTFNIMIDFLCKEGDLAEARA 215
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L R+ +P+ VT+ SLI G + E L ++R GC P+V TYN L+N
Sbjct: 216 LLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFC 275
Query: 134 RTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
+ G A + F EM F G V +A +LF QM+ + + P+ V
Sbjct: 276 KFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEV 335
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT ++ G C A ++A L EM+ QGV NVVT+ V++D LCK GK+ EA + LM
Sbjct: 336 TYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLM 395
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G+R N +Y TL+ G + RA L M+ G V Y LI G C +++
Sbjct: 396 ERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKL 455
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A SL +M G+KP+ VIY + F+ + A L +M G + TY
Sbjct: 456 DEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCAL 515
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+DGLCK I EA+ F + L E +++AY L+DGL
Sbjct: 516 VDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGL 554
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 192/431 (44%), Gaps = 47/431 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L K + V L + G PD+ TYN L+NCFCK GR+ +
Sbjct: 227 PDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSY 286
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R N VTF++ + C + EA LF ++R+ G +PN TY L++G +
Sbjct: 287 FAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCK 346
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFL------------- 169
G AL L EM V EG V +A+++F
Sbjct: 347 AGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELL 406
Query: 170 ----------------------QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
+MKD+ + DV Y ++I G C +EAK LL +M
Sbjct: 407 YTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMD 466
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+ G++PN V + IMD K K EA LL M+ G RPN Y L+DG C G ++
Sbjct: 467 ECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSID 526
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A F M +G V +Y+ L++G CKN ++ A+ L EM+ KG+ D V+ +L
Sbjct: 527 EAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLM 586
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
+ ++ AF L +M G+ D + Y F+ G C + I EA E+ +
Sbjct: 587 DGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGIT 646
Query: 388 LDIRAYNCLID 398
D YNCLI+
Sbjct: 647 PDAVVYNCLIN 657
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 181/371 (48%), Gaps = 12/371 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +F+ KN + LF ++ G+ P+ TY L++ CK GR+ V+
Sbjct: 299 VVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTN 358
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+++ N VT+T L+ GLC E ++ EA +F + G N Y TLI+G +
Sbjct: 359 EMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYK 418
Query: 137 HTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYT 184
++ AL+L EM E V + +D+AK L +M + + P+ V YT
Sbjct: 419 NSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYT 478
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+++ A +EA LL +MMD G +PN+VT+ ++D LCK G +DEA + M+ +
Sbjct: 479 NIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDL 538
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G+ PN Y L+DG C GR+++A L M G + + L++G+ K ++ A
Sbjct: 539 GLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDA 598
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
+L +M++ G++ D+ Y ++ ++ A ++ EM +G+ D Y I+
Sbjct: 599 FALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINK 658
Query: 365 LCKNSYIVEAV 375
K + EA
Sbjct: 659 CQKLGNMEEAA 669
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 186/386 (48%), Gaps = 28/386 (7%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
LA+ + + SL RL + G P L + + + + LG R P+
Sbjct: 80 LARARLFPHSRSLLSRLLAPGHHPHLAASLVDL--------LHRAALALGP--RRSALPS 129
Query: 87 AV-TFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNL 144
V T SL+ A+ +++ A L ++R PN T N ++ L R + +A L
Sbjct: 130 VVDTLLSLL----ADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRL 185
Query: 145 FEEMASGNG-EFGV-------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
FE++ + N F + EG + +A+ L +MK +PDVVTY S+I G+ +
Sbjct: 186 FEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGEL 245
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
E + L+ EM G +P+VVT+N +++ CK G+M+ A M + GV N ++T
Sbjct: 246 EEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTF 305
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+D FC G V A +LF M G +Y+ L++G CK ++ AL L EM+ +G+
Sbjct: 306 VDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGV 365
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG--LCKNSYIVEA 374
+VV Y L L + +V A +F M+R G+ A+ Y T I G + KNS A
Sbjct: 366 PLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSE--RA 423
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ L ++ ELD+ Y LI GL
Sbjct: 424 LSLLSEMKDKGMELDVSLYGALIWGL 449
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 165/352 (46%), Gaps = 12/352 (3%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ M+ P ++ L K D L L + G+ ++ TY +L++ CK G+
Sbjct: 325 MRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGK 384
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V+ V + R+ N + +T+LI G A +L ++++ G E +V Y
Sbjct: 385 VAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGA 444
Query: 128 LING---LYRTGHTIVALNLFEEMASGNGEFGVEGFVD---KAKE------LFLQMKDEN 175
LI G L + LN +E +D KA++ L +M D
Sbjct: 445 LIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSG 504
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
P++VTY +++ G C A +EA +M+D G++PNV + ++D LCKNG++D+A
Sbjct: 505 FRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAV 564
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
LLD MI G+ + V +LMDG G + A L M + G ++ Y+ + G+
Sbjct: 565 LLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGF 624
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
C I+ A + EM+ GI PD V+YN L ++ +E A L +EM+
Sbjct: 625 CNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEME 676
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 57/136 (41%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L L KN D + L + G+ D L++ K G + F +
Sbjct: 542 PNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFAL 601
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ S + +T + G C + I EA + +++ G P+ YN LIN +
Sbjct: 602 KAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQK 661
Query: 135 TGHTIVALNLFEEMAS 150
G+ A L EM S
Sbjct: 662 LGNMEEAAILQNEMES 677
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/378 (31%), Positives = 197/378 (52%), Gaps = 24/378 (6%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML+ P PP + FN L + + K Y+TV+SLFK + G+ ++ T +ILINCFC
Sbjct: 28 FNRMLDRNPQPP-IIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFC 86
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ V +GF V G+ L+ F P+ V FT+LI G+C + AA L ++ + GC P+V
Sbjct: 87 FLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVV 146
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
T N+L+ G + +G +DK +++F M + + PDV +Y
Sbjct: 147 TCNSLMRG-----------------------YCSQGKIDKVRKIFHLMVSKGLKPDVYSY 183
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
+ I G+C +EA L EM +GV PN VT+N ++ LC+ + +A L M
Sbjct: 184 SIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCA 243
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G+ P+ Y+TL+DGFC G ++ LF M+ + Y+I+ING C++++++
Sbjct: 244 CGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKD 303
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A + ++ +G+KPDV Y L L + A +LF +M+ DG + +Y +
Sbjct: 304 AKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQ 363
Query: 364 GLCKNSYIVEAVELFRTL 381
G +++ V+L +
Sbjct: 364 GCLQHNDTSTVVQLIHEM 381
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 153/296 (51%), Gaps = 23/296 (7%)
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKA 164
+A A F ++ +P + +N L++ + R ++LF+EM EF
Sbjct: 23 DALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEM-----EF--------- 68
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
I +V T + +I FC+ + + + + + +G +P+VV F ++D
Sbjct: 69 ---------RGIKYNVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDG 119
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
+C+ GK + A+ LL M +G P+ N+LM G+C G++++ +++F M S G
Sbjct: 120 VCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPD 179
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
V+SYSI INGYCK ++I+ A+ L+ EM +G+ P+ V YNTL L + + A LF
Sbjct: 180 VYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFR 239
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+M G++ D Y T +DG CK + E + LF+ ++ + D+ Y +I+G+
Sbjct: 240 KMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGM 295
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 120/244 (49%)
Query: 156 GVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNV 215
G G +D A F +M D N P ++ + ++ + L EM +G++ NV
Sbjct: 16 GYFGNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNV 75
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
T +++++ C +D + ++ G +P+ ++ TL+DG C G+ A L
Sbjct: 76 CTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKE 135
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
M +GC V + + L+ GYC +I+ ++ M+SKG+KPDV Y+ ++ +
Sbjct: 136 MGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEK 195
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
++ A +LFDEM GV + TY T I LC+ +A LFR + DI AY+
Sbjct: 196 IDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYST 255
Query: 396 LIDG 399
L+DG
Sbjct: 256 LLDG 259
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 117/257 (45%), Gaps = 14/257 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + N L D V +F + S GL PD+Y+Y+I IN +CK+ ++ +
Sbjct: 143 PDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMEL 202
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ PNAVT+ +LIK LC R +A LF K+ G P++ Y+TL++G +
Sbjct: 203 FDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCK 262
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G+ L LF+EM NG D AKE+ ++ E + PDV
Sbjct: 263 QGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKD-AKEVLSRLIVEGLKPDVH 321
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT+++ G C EA L +M + G P ++NV++ ++ +L+ M
Sbjct: 322 TYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEM 381
Query: 242 IQIGVRPNAFVYNTLMD 258
G +A L D
Sbjct: 382 ADRGFYADAVTRTFLKD 398
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 214/406 (52%), Gaps = 27/406 (6%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
N+L L K ++ + +++ + S GL P + T+ LI+ C+ G + + +
Sbjct: 151 NVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRV 210
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
P + +T LI+GLC++++I EA ++ +R G PNV+TYNTL++G + +
Sbjct: 211 KGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQ 270
Query: 141 ALNLFEEMASGNG------EFGVE-------GFVDKAKELFLQMKDENINPDVVTYTSVI 187
AL L+++M G G FG+ G + A+ LF+ M ++ P++ Y S+I
Sbjct: 271 ALRLYQDML-GEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLI 329
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
+C D +EA L +E+ V P+V T+++++ LC + +EA + + M + G+
Sbjct: 330 DAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGIL 389
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
N+ YN+L+DG C G++++A E+ M G V ++S LI+GYCK + ++ A+ +
Sbjct: 390 ANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGI 449
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
Y EM+ K + PDVV Y + + ++ A KL+ +M +G+ + +T +DGLCK
Sbjct: 450 YSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCK 509
Query: 368 NSYIVEAVELFR---TLRILKCELDIR----------AYNCLIDGL 400
+ I +A+ELF + +C +D AY LI GL
Sbjct: 510 DGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGL 555
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 195/411 (47%), Gaps = 37/411 (9%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M ++ P V + IL L + + S+ + + G++P++YTYN L++ +
Sbjct: 204 MFDEM-RVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGY 262
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK+ + +L P+ VTF LI GLC + A LF + F PN+
Sbjct: 263 CKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNI 322
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
YN+LI+ + G V +A LFL+++ ++PDV T
Sbjct: 323 AVYNSLIDAYCKVGD-----------------------VSEAMALFLELERFEVSPDVFT 359
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+ +IRG C + EA + +M +G+ N VT+N ++D CK GKMD+A + M
Sbjct: 360 YSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMT 419
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ GV PN ++TL+DG+C + A ++ M + V +Y+ +I+G+CK ++
Sbjct: 420 ENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMK 479
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE-----MQRDGVAA---- 353
AL LY +ML GI P+ + L L + ++ A +LF E R V A
Sbjct: 480 EALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSK 539
Query: 354 ----DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ Y I GLC++ +AV+LF +R + D Y ++ GL
Sbjct: 540 PSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGL 590
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 191/373 (51%), Gaps = 26/373 (6%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
L K + + LS++ ++ G + N+L+ K GR + + ++ + +P+
Sbjct: 125 LCKMELVEEALSMYHKV---GAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPS 181
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
+TF +LI G C + ++ A +F ++RV G P V Y LI GL
Sbjct: 182 VITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGL-------------- 227
Query: 147 EMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
S N +++A+ + M++ + P+V TY +++ G+C + +A L +M
Sbjct: 228 --CSDNK-------IEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDM 278
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+ +G+ P+VVTF +++D LCK G+M A L MI+ V PN VYN+L+D +C G V
Sbjct: 279 LGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDV 338
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ A LF+ +E + VF+YSILI G C E A +++ +M +GI + V YN+L
Sbjct: 339 SEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSL 398
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
+ ++++A ++ +M +GV + T+ T IDG CK + A+ ++ + I
Sbjct: 399 IDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSL 458
Query: 387 ELDIRAYNCLIDG 399
D+ Y +IDG
Sbjct: 459 SPDVVTYTAMIDG 471
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 188/370 (50%), Gaps = 29/370 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L K + L L++ + GL PD+ T+ ILI+ CK G + +
Sbjct: 250 PNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNL 309
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ TPN + SLI C + EA ALF +L F P+VFTY+ LI GL
Sbjct: 310 FVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCS 369
Query: 135 TGHTIVALNLFEEMASGNGEFG-------------VEGFVDKAKELFLQMKDENINPDVV 181
T A N+FE+M + G EG +DKA E+ QM + + P+V+
Sbjct: 370 VSRTEEAGNIFEKM-TKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVI 428
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
T++++I G+C + A + EM+ + + P+VVT+ ++D CK G M EA +L M
Sbjct: 429 TFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDM 488
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV----------SMESMGCTHTV---FSY 288
+ G+ PN + + L+DG C G+++ A ELF ++++ G ++ +Y
Sbjct: 489 LDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAY 548
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ LI+G C++ + A+ L+ +M G++PD VIY + LF++ + L +M +
Sbjct: 549 TALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYI--LMMLHADMLK 606
Query: 349 DGVAADTWTY 358
GV ++ +
Sbjct: 607 FGVIPNSAVH 616
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/364 (31%), Positives = 185/364 (50%), Gaps = 23/364 (6%)
Query: 53 YTYNILINCFCKMGRVSHG----FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 108
Y N L+ K + H F L R+ S FTPN + LI LC + EA +
Sbjct: 79 YLLNDLVQNLVKSHKPYHACQLAFSELSRLKSSKFTPN--VYGELIIVLCKMELVEEALS 136
Query: 109 LFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG------EFGV----- 157
++ K+ G + N L+ L +TG + ++EEM S NG FG
Sbjct: 137 MYHKV---GAALTIQACNVLLYVLVKTGRFELLWRIYEEMIS-NGLSPSVITFGTLIDGC 192
Query: 158 --EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNV 215
+G + +A+E+F +M+ + I P V+ YT +IRG C N EA+ + M + GV PNV
Sbjct: 193 CRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNV 252
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
T+N +MD CK +A RL M+ G+ P+ + L+DG C G + A+ LFV+
Sbjct: 253 YTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVN 312
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
M T + Y+ LI+ YCK ++ A++L+ E+ + PDV Y+ L L + +
Sbjct: 313 MIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSR 372
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
E A +F++M ++G+ A++ TY + IDG CK + +A+E+ + E ++ ++
Sbjct: 373 TEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFST 432
Query: 396 LIDG 399
LIDG
Sbjct: 433 LIDG 436
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 121/380 (31%), Positives = 198/380 (52%), Gaps = 24/380 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+N L LA+ D + ++ + + P++YTYN ++N +CK+G V + I+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+ P+ T+TSLI G C + A +F ++ + GC N Y LI+GL
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGL------- 298
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
VE +D+A +LF++MKD++ P V TYT +I+ C + +EA
Sbjct: 299 ----------------CVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEA 342
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
L+ EM ++G++PN+ T+ V++D LC K+++A LL M++ G+ PN YN L++G
Sbjct: 343 LNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALING 402
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
+C G + A ++ MES +Y+ LI GYCK + + A+ + +ML + + PD
Sbjct: 403 YCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPD 461
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
VV YN+L + A++L M G+ D WTY + ID LCK+ + EA +LF
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFD 521
Query: 380 TLRILKCELDIRAYNCLIDG 399
+L ++ Y LIDG
Sbjct: 522 SLEQKDVIPNVVMYTALIDG 541
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 193/392 (49%), Gaps = 11/392 (2%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ L L + D + LF ++ +P + TY +LI C R S ++ +
Sbjct: 290 AYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEM 349
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PN T+T LI LC++ ++ +A L ++ G PNV TYN LING + G
Sbjct: 350 EEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409
Query: 139 IVALNLFEEMASGNGEFG-------VEGF----VDKAKELFLQMKDENINPDVVTYTSVI 187
AL++ E M S N ++G+ V KA + +M + + PDVVTY S+I
Sbjct: 410 EDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLI 469
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
G C + +++ A LL M D+G+ P+ T+ ++D LCK+ +++EA L D + Q V
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVI 529
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
PN +Y L+DG+C G+VN A + M S C +++ LI+G C + +++ A L
Sbjct: 530 PNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLL 589
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
+M+ ++P V L L + + A++ F +M G D TY TFI C+
Sbjct: 590 EEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCR 649
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ +A ++ ++ D+ Y+ LI G
Sbjct: 650 EGRLQDAEDMVAKMKENGVSPDLFTYSSLIKG 681
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 171/368 (46%), Gaps = 13/368 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++ +L L + L ++ GL P++ TYN LIN +CK G + V
Sbjct: 356 PNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDV 415
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + PN T+ LIKG C + + +A + K+ P+V TYN+LI+G R
Sbjct: 416 VELMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474
Query: 135 TGHTIVALNLFEEM------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+G+ A L M S V++A +LF ++ +++ P+VV
Sbjct: 475 SGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVM 534
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT++I G+C A NEA +L +M+ + PN +TFN ++ LC +GK+ EA+ L + M+
Sbjct: 535 YTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMV 594
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+I ++P L+ G + A F M S G +Y+ I YC+ ++
Sbjct: 595 KIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQ 654
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A + +M G+ PD+ Y++L ++ + AF + M G T+ + I
Sbjct: 655 DAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLI 714
Query: 363 DGLCKNSY 370
L + Y
Sbjct: 715 KHLLEMKY 722
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 198/424 (46%), Gaps = 31/424 (7%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++N R P ++ + L K+K + LF L + P++ Y LI+ +CK G
Sbjct: 487 LMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAG 546
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+V+ ++L ++L PN++TF +LI GLC + ++ EA L K+ +P V T
Sbjct: 547 KVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDT 606
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDE 174
LI+ L + G A F++M S + + EG + A+++ +MK+
Sbjct: 607 ILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKEN 666
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC--KNGKM- 231
++PD+ TY+S+I+G+ N A +L M D G +P+ TF ++ L K GK+
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVK 726
Query: 232 ---------------DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
D LL+ M++ GV PNA Y LM G C G + A+++F M
Sbjct: 727 GGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHM 786
Query: 277 ESM-GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
+ G + + ++ L++ CK ++ A + +M+ G P + L L++ +
Sbjct: 787 QQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGE 846
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
ER +F + + G D ++ IDG+ K + ELF + C + Y+
Sbjct: 847 KERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSL 906
Query: 396 LIDG 399
LI+G
Sbjct: 907 LIEG 910
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 166/348 (47%), Gaps = 33/348 (9%)
Query: 52 LYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 111
+Y+Y L+ G V F + +++SC ++V T + LC + E+ L
Sbjct: 123 VYSYASLLTLLINNGYVGVVFKIRLLMIKSC---DSVADTLFVLDLCRKMNKDESFELKY 179
Query: 112 KLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQM 171
KL + GC YNTL+N L R G VD+ K+++++M
Sbjct: 180 KL-IIGC------YNTLLNSLARFG-----------------------LVDEMKQVYMEM 209
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
++ + P++ TY ++ G+C + EA + +++ G+ P+ T+ ++ C+ +
Sbjct: 210 LEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDL 269
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
D A ++ M G R N Y L+ G C+ R++ A +LFV M+ C TV +Y++L
Sbjct: 270 DSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVL 329
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I C ++ AL+L EM KGIKP++ Y L L ++E+A +L +M G+
Sbjct: 330 IKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGL 389
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ TY I+G CK I +A+++ + + R YN LI G
Sbjct: 390 MPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKG 437
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 91/183 (49%)
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
+N +++ L + G +DE ++ M++ V PN + YN +++G+C G V A + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
G F+Y+ LI GYC+ K+++ A ++ EM KG + + V Y L L +++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRID 305
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
A LF +M+ D TY I LC + EA+ L + + + +I Y LI
Sbjct: 306 EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLI 365
Query: 398 DGL 400
D L
Sbjct: 366 DSL 368
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 52/129 (40%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD+M P FN L C K + ++ + + G P L + ILI
Sbjct: 782 VFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRL 841
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K G G V +L+ + + + + +I G+ + + LF + GC +
Sbjct: 842 YKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSS 901
Query: 123 FTYNTLING 131
TY+ LI G
Sbjct: 902 QTYSLLIEG 910
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 200/407 (49%), Gaps = 21/407 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N + L K+ + LF+ L G PD+ TYN LI+ CK G + +
Sbjct: 35 PTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRL 94
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE--PNVFTYNTLINGL 132
G + PN VT++ LI GLC RI EA L ++ C+ PN+ TYN+ ++GL
Sbjct: 95 HGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGL 154
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVE--------------GFVDKAKELFLQMKDENINP 178
+ T A L + G+ + G +D+A +F M P
Sbjct: 155 CKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVP 214
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
+V+TY +++ G C A+ A ++ M+D+GV P+V+T++V++D CK ++DEA LL
Sbjct: 215 NVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELL 274
Query: 239 DLMIQIGVRPNAFV-----YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
M G PN V +N L+ G C G +A LF M + V ++ LI+
Sbjct: 275 HGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALID 334
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
G CK ++E A + M + G+ P+VV YN L L + ++E A + +EM G
Sbjct: 335 GLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVP 394
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D+ TY + + LC+ S +A++L L+ + D YN L+DGL
Sbjct: 395 DSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGL 441
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 129/403 (32%), Positives = 200/403 (49%), Gaps = 22/403 (5%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFK-RLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVL 75
V +NI+ L + L +F+ + G+ P + TYN +IN CK + G +
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 76 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRT 135
++ P+ VT+ +LI LC + EA L + GC PNV TY+ LINGL +
Sbjct: 61 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120
Query: 136 GHTIVALNLFEEMASGNGE-----FGVEGFVD---------KAKELFLQMKDEN--INPD 179
G A L +EM + + F+D +A EL ++D + ++PD
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
VT++++I G C +EA + +M+ G PNV+T+N +++ LCK KM+ A +++
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF-----SYSILING 294
M+ GV P+ Y+ L+D FC RV+ A EL M S GCT V +++ILI G
Sbjct: 241 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAG 300
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
CK E A +L+ EM++K ++PDV+ + L L + QVE A + D M GV +
Sbjct: 301 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 360
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
TY + GLCK+ I EA + + C D Y L+
Sbjct: 361 VVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLV 403
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 128/427 (29%), Positives = 195/427 (45%), Gaps = 56/427 (13%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V ++N L L K + L ++S G P++ TY++LIN CK+GR+
Sbjct: 66 RGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDE 125
Query: 71 GFVVLGRILR-SC--------------------------------------FTPNAVTFT 91
++ + R SC +P+ VTF+
Sbjct: 126 ARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFS 185
Query: 92 SLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG 151
+LI GLC +I EA ++F + G PNV TYN L+NGL + A + E M
Sbjct: 186 TLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDK 245
Query: 152 N------------GEFGVEGFVDKAKELFLQMKDENINPDV-----VTYTSVIRGFCYAN 194
F VD+A EL M P+V VT+ +I G C A
Sbjct: 246 GVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAG 305
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
++ +A L EM+ + +QP+V+TF ++D LCK G+++ A +LDLM +GV PN YN
Sbjct: 306 NFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYN 365
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ G C +GR+ A + M S GC +Y L+ C+ + AL L E+ S
Sbjct: 366 ALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSF 425
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G PD V YN L L++ + E+A + +EM G D++T+ GL ++ +
Sbjct: 426 GWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGT 485
Query: 375 VELFRTL 381
+EL R +
Sbjct: 486 MELLRVV 492
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 182/368 (49%), Gaps = 29/368 (7%)
Query: 9 NMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV 68
++R SP V +F+ L L K D S+F + + G P++ TYN L+N CK ++
Sbjct: 174 SLRVSPDTV-TFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKM 232
Query: 69 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF----- 123
++ ++ TP+ +T++ L+ C SR+ EA L + GC PNV
Sbjct: 233 ERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKV 292
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
T+N LI G + G+ A LFEEM + +N+ PDV+T+
Sbjct: 293 TFNILIAGACKAGNFEQASALFEEMVA-----------------------KNLQPDVMTF 329
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
++I G C A A+ +L M + GV PNVVT+N ++ LCK+G+++EA + L+ M+
Sbjct: 330 GALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVS 389
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G P++ Y +L+ C R + A +L ++S G +Y+IL++G K+ + E
Sbjct: 390 SGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQ 449
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A+++ EM+ KG +PD + F L + +L + G+ D T + +D
Sbjct: 450 AITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 509
Query: 364 GLCKNSYI 371
+C++ +
Sbjct: 510 WVCRSGKL 517
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 153/317 (48%), Gaps = 25/317 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L K + ++ + + G+ PD+ TY++L++ FCK RV +
Sbjct: 214 PNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALEL 273
Query: 75 L-GRILRSC----FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
L G R C P+ VTF LI G C +A+ALF ++ +P+V T+ LI
Sbjct: 274 LHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALI 333
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFGV----------------EGFVDKAKELFLQMKD 173
+GL + G A ++ + M G GV G +++A + +M
Sbjct: 334 DGLCKAGQVEAARDILDLM----GNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVS 389
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
PD +TY S++ C A+ ++A L+ E+ G P+ VT+N+++D L K+GK ++
Sbjct: 390 SGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQ 449
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A +L+ M+ G +P++F + G +G + EL + + G + S +++
Sbjct: 450 AITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 509
Query: 294 GYCKNKEIEGALSLYGE 310
C++ +++ ++ E
Sbjct: 510 WVCRSGKLDDVKAMIKE 526
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 129/280 (46%), Gaps = 17/280 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG-----LFPDLYTYNILINCFCKMGRVS 69
P V ++++L K D L L + S G L PD T+NILI CK G
Sbjct: 249 PDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFE 308
Query: 70 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
+ ++ P+ +TF +LI GLC ++ A + + G PNV TYN L+
Sbjct: 309 QASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALV 368
Query: 130 NGLYRTGHTIVALNLFEEMAS----------GNGEFGV--EGFVDKAKELFLQMKDENIN 177
+GL ++G A EEM S G+ + + D A +L ++K +
Sbjct: 369 HGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWD 428
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
PD VTY ++ G + +A +L EM+ +G QP+ TF L ++G + L
Sbjct: 429 PDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMEL 488
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
L +++ G+ P+A ++++D C +G+++ K + E
Sbjct: 489 LRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 135/398 (33%), Positives = 207/398 (52%), Gaps = 16/398 (4%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + N + LA+N+ V LF+ L + P+++T+NI+I+ CK G +
Sbjct: 165 PPNTRTCNHILLRLARNRQGGLVRRLFEHLPA----PNVFTFNIVIDFLCKQGELVEARA 220
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ R+ +P+ VT+ SLI G + E L +++R GC +V TYN LIN
Sbjct: 221 LFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFS 280
Query: 134 RTGHTIVALNLFEEM------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
+ G A + F EM ++ F EG V +A +LF QM+ + P+
Sbjct: 281 KFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEF 340
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYTS++ G C A ++A LL EM+ QG+ PNVVT+ V++D LCK GK+ A +L LM
Sbjct: 341 TYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLM 400
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ GV+ N +Y TL+ G + RA +L M++ G V Y LI G CK +++
Sbjct: 401 ERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKL 460
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A SL +M G++P+ VIY T+ F+ + A L ++ G+ + TY
Sbjct: 461 DEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCAL 520
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
IDGLCK I EA+ F +R L + +++ Y LIDG
Sbjct: 521 IDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDG 558
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 129/430 (30%), Positives = 190/430 (44%), Gaps = 47/430 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L K + V L + +G D+ TYN LINCF K G + +
Sbjct: 232 PDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSY 291
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
G + R N VT ++ + C E + EA LF ++RV G PN FTY +L++G +
Sbjct: 292 FGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCK 351
Query: 135 TGHTIVALNLFEEMAS------------------GNGEFGVEGFV--------------- 161
G A+ L +EM G+ V V
Sbjct: 352 AGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELL 411
Query: 162 --------------DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
++A +L +MK++ + DV Y ++I G C +EAK LL +M
Sbjct: 412 YTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMD 471
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
D G++PN V + IMD K GK EA LL + G++PN Y L+DG C G +
Sbjct: 472 DCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIY 531
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A F M +G V Y+ LI+G+CK + A+ L EM+ KG+ D V+Y +L
Sbjct: 532 EAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLI 591
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
+ ++ AF L +M G+ D + Y FI G C + + EA + +
Sbjct: 592 DGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGIT 651
Query: 388 LDIRAYNCLI 397
D AYNCLI
Sbjct: 652 PDKTAYNCLI 661
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 180/354 (50%), Gaps = 12/354 (3%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 95
+ LF ++ G+ P+ +TY L++ CK GR+ V+L ++ PN VT+T ++
Sbjct: 323 AMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVD 382
Query: 96 GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEF 155
GLC E ++ A + + + G + N Y TLI+G + ++ AL+L EM + E
Sbjct: 383 GLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMEL 442
Query: 156 GVEGF------------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
V + +D+AK L +M D + P+ V YT+++ F A +EA LL
Sbjct: 443 DVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALL 502
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
++ D G+QPNVVT+ ++D LCK G + EA D M ++G+ PN VY TL+DGFC
Sbjct: 503 HKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKI 562
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
G +++A L M G + Y+ LI+G+ K +++GA +L +M+ G++ D+ Y
Sbjct: 563 GSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCY 622
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
++ ++ A + EM G+ D Y I K + EA L
Sbjct: 623 TCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSL 676
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 121/268 (45%), Gaps = 25/268 (9%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V + L L K + D SL +++ GL P+ Y +++ F K G+ S +L
Sbjct: 444 VSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLH 503
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+I S PN VT+ +LI GLC I EA + F K+R G +PNV Y TLI+G + G
Sbjct: 504 KIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIG 563
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
A++L EM VDK L D V YTS+I G D
Sbjct: 564 SLSKAVHLMNEM------------VDKGMSL-----------DKVVYTSLIDGHMKQGDL 600
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
A L +M++ G+Q ++ + + C M EA +L MI G+ P+ YN L
Sbjct: 601 QGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCL 660
Query: 257 MDGFCLTGRVNRAKELFVSMESM--GCT 282
+ + G + A L MES+ CT
Sbjct: 661 IRKYQKLGNMEEASSLQNEMESVLSSCT 688
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 133/284 (46%), Gaps = 23/284 (8%)
Query: 30 NKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVT 89
NK+ + L L + + G+ D+ Y LI CK+ ++ +L ++ PN V
Sbjct: 422 NKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVI 481
Query: 90 FTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
+T+++ + EA AL K+ G +PNV TY LI+GL + G A++ F
Sbjct: 482 YTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHF---- 537
Query: 150 SGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
DK +EL ++P+V YT++I GFC ++A L+ EM+D+
Sbjct: 538 ------------DKMREL-------GLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDK 578
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
G+ + V + ++D K G + A L MI+ G++ + + Y + GFC + A
Sbjct: 579 GMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEA 638
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
+ + M G T +Y+ LI Y K +E A SL EM S
Sbjct: 639 RGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEMES 682
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 66/171 (38%), Gaps = 35/171 (20%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L L K +S F ++ GL P++ Y LI+ FCK+G +S +
Sbjct: 512 PNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHL 571
Query: 75 LGRILRSCFTPNAVTFTSL-----------------------------------IKGLCA 99
+ ++ + + V +TSL I G C
Sbjct: 572 MNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCN 631
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS 150
+ + EA + +++ G P+ YN LI + G+ A +L EM S
Sbjct: 632 MNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEMES 682
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 132/399 (33%), Positives = 202/399 (50%), Gaps = 13/399 (3%)
Query: 15 PPVCSFNILFGCLAK-NKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P V S+N + + + K +++ + ++G+ ++++YNILI FC G + G
Sbjct: 165 PGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLR 224
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ R+ PN VT+ ++I C RI EA L + + G EPN+ TYN +INGL
Sbjct: 225 FFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLC 284
Query: 134 RTGHTIVALNLFEEM-ASGNGEFGVE-----------GFVDKAKELFLQMKDENINPDVV 181
R G + EM G GV G +A L +M + PDVV
Sbjct: 285 RVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVV 344
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYTS+I C A + N A +M +G++PN VT+ +++ + G MDEA R+ D M
Sbjct: 345 TYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEM 404
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
I+ G P YN L++G C++GR+ A L ME G + V SYS +I G+C+ +E+
Sbjct: 405 IRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQEL 464
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A + EM+ KG+ PD + Y++L L E ++ A LF EM + D +TY +
Sbjct: 465 DRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSL 524
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I+G CK + EA+ L + D YN LI+GL
Sbjct: 525 INGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGL 563
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/412 (30%), Positives = 208/412 (50%), Gaps = 27/412 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + G K K D L + + GL P+L TYN++IN C++GR+ V
Sbjct: 236 PNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGV 295
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + R F P+ VT+ +L+ G C +A L +++ G P+V TY +LIN + +
Sbjct: 296 LAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCK 355
Query: 135 TGHTIVALNLFEEMA----SGNG--------EFGVEGFVDKAKELFLQMKDENINPDVVT 182
G+ A+ F++M NG F +GF+D+A ++ +M P +VT
Sbjct: 356 AGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVT 415
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++ G C + EA LL M +G+ P+VV+++ I+ C+ ++D A ++ M+
Sbjct: 416 YNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMV 475
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ GV P+A Y++L+ G C R+N A +LF M + F+Y+ LINGYCK ++
Sbjct: 476 EKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLN 535
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL-----FDEMQRDGVAADTW- 356
AL+L+ EM+ KG PD V YN L L + + A +L +DE +G+ DT
Sbjct: 536 EALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLI 595
Query: 357 ---------TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ I G C + EA ++F ++ + + YN +I G
Sbjct: 596 ESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHG 647
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 169/349 (48%), Gaps = 35/349 (10%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP V ++ L + K + + + F +++ GL P+ TY LIN F + G + +
Sbjct: 340 PPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYR 399
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ ++RS F P VT+ +L+ G C R+ EA L + G P+V +Y+T+I G
Sbjct: 400 IWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFC 459
Query: 134 RTGHTIVALNLFEEMASGNGEFGV-----------EGF-----VDKAKELFLQMKDENIN 177
R A + EM E GV +G +++A +LF +M ++++
Sbjct: 460 RYQELDRAFQMNAEMV----EKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLL 515
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
PD TYTS+I G+C D NEA L EM+ +G P+ VT+NV+++ L K + EA RL
Sbjct: 516 PDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRL 575
Query: 238 LDLMIQIGVRPNAFVYNTLMD---------------GFCLTGRVNRAKELFVSMESMGCT 282
L + PN Y+TL++ GFC+ G +N A ++F SM
Sbjct: 576 LLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQK 635
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
Y+++I+G+C++ + A LY EM+ G P V L L+
Sbjct: 636 PNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALY 684
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 169/331 (51%), Gaps = 14/331 (4%)
Query: 82 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV- 140
C + +AV F ++K + I +A + ++ G P V +YN +++ + R ++
Sbjct: 128 CNSSSAV-FDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIF 186
Query: 141 ALNLFEEM-ASGNG-----------EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
A ++ EM ASG F G ++ F +M+ P+VVTY +VI
Sbjct: 187 AEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIG 246
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
+C +EA LL M +G++PN++T+N++++ LC+ G+++E S +L M + G P
Sbjct: 247 AYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAP 306
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
+ YNTL++G+C G ++A L M G V +Y+ LIN CK + A+ +
Sbjct: 307 DGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFF 366
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
+M +G++P+ V Y +L + ++ A++++DEM R G TY ++G C +
Sbjct: 367 DQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVS 426
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ EA+ L R + D+ +Y+ +I G
Sbjct: 427 GRMEEAIGLLRGMEGKGLSPDVVSYSTIIAG 457
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 164/353 (46%), Gaps = 40/353 (11%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + ++N L + + + L + + GL PD+ +Y+ +I FC+ + F
Sbjct: 410 PPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQ 469
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ ++ +P+A+T++SLI+GLC + R+ EA LF ++ P+ FTY +LING
Sbjct: 470 MNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYC 529
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ G ALNL +EM +GF+ PD VTY +I G
Sbjct: 530 KEGDLNEALNLHDEMIK-------KGFL----------------PDTVTYNVLINGLNKQ 566
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE---------------LCKNGKMDEASRLL 238
EAK LL+++ PN +T++ +++ C G M+EA ++
Sbjct: 567 ARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVF 626
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG-CTHTVFSYSILINGYCK 297
+ MI+ +PN VYN ++ G C G V++A +L+ M G HTV +++ Y +
Sbjct: 627 ESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSE 686
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+ + L + ++L D + L + + ++ F L EM +DG
Sbjct: 687 GMDEQLNLVIR-DILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAKDG 738
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 123/407 (30%), Positives = 202/407 (49%), Gaps = 16/407 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D ML R P V ++ +L + KN ++ +++ + + G P++ TYN++IN
Sbjct: 164 LLDDMLR-RGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGM 222
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ GRV +L R+ P+ V++T+L+KGLCA R + LF ++ C PN
Sbjct: 223 CREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNE 282
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
T++ LI R G A+ + ++M +G VD A +
Sbjct: 283 VTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNN 342
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M NPD ++YT+V++G C A WN+AK LL EM+ PN VTFN + LC+ G
Sbjct: 343 MGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGL 402
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+++A L++ M + G YN L++GFC+ G ++ A ELF SM C +Y+
Sbjct: 403 IEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELF---RSMPCKPNTITYTT 459
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L+ G C + ++ A L EML + P+VV +N L + ++ A +L ++M G
Sbjct: 460 LLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHG 519
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ TY T DG+ K+ +A+EL L D+ ++ +I
Sbjct: 520 CTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSII 566
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 192/388 (49%), Gaps = 29/388 (7%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
SP V ++N L + H D L + S + PD YTY LI C GRV+
Sbjct: 106 SPVDVFAYNTLVAGYCRYGHLDAARRL---IGSMPVAPDAYTYTPLIRVLCDRGRVADAL 162
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+L +LR PN VT+T L++ +C S +A A+ ++R GC PN+ TYN +ING+
Sbjct: 163 SLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGM 222
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
R EG VD A++L ++ PD V+YT++++G C
Sbjct: 223 CR-----------------------EGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCA 259
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
+ W++ + L EMM++ PN VTF++++ C+ G ++ A ++L M + N +
Sbjct: 260 SKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTL 319
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
N +++ C GRV+ A + +M S GC SY+ ++ G C+ + A L EM+
Sbjct: 320 CNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMV 379
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
P+ V +NT +L + +E+A L ++MQ G TY ++G C +I
Sbjct: 380 RNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHID 439
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
A+ELFR+ + C+ + Y L+ GL
Sbjct: 440 SALELFRS---MPCKPNTITYTTLLTGL 464
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 187/415 (45%), Gaps = 52/415 (12%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTY------------------- 55
P S+ L L +K +D V LF + P+ T+
Sbjct: 245 PDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQV 304
Query: 56 ----------------NILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
NI+IN CK GRV F L + P+ +++T+++KGLC
Sbjct: 305 LQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCR 364
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM----------- 148
R +A L ++ C PN T+NT I L + G A+ L E+M
Sbjct: 365 AERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVT 424
Query: 149 --ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
A NG F V+G +D A ELF M P+ +TYT+++ G C A + A L+ EM
Sbjct: 425 YNALVNG-FCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDAAAELVAEM 480
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+ + PNVVTFNV+++ C+ G +DEA L++ M++ G PN YNTL DG
Sbjct: 481 LHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSS 540
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
A EL + S G + V ++S +I K +E A+ ++ G++P ++YN +
Sbjct: 541 EDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKI 600
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+ L + H+++ A M +G + TY I+GL + + EA +L L
Sbjct: 601 LLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSML 655
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 147/321 (45%), Gaps = 26/321 (8%)
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
R P+ T LI+ LC R +AA + G +VF YNTL+ G R GH
Sbjct: 68 RDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGH-- 125
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
+D A+ L M + PD TYT +IR C +A
Sbjct: 126 ---------------------LDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADA 161
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
LL +M+ +G QPNVVT+ V+++ +CKN ++A +LD M G PN YN +++G
Sbjct: 162 LSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIING 221
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
C GRV+ A++L + S GC SY+ L+ G C +K + L+ EM+ K P+
Sbjct: 222 MCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPN 281
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
V ++ L VERA ++ +M A +T I+ +CK + +A +
Sbjct: 282 EVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLN 341
Query: 380 TLRILKCELDIRAYNCLIDGL 400
+ C D +Y ++ GL
Sbjct: 342 NMGSYGCNPDTISYTTVLKGL 362
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 144/304 (47%), Gaps = 28/304 (9%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP +FN L + + + L +++ G + TYN L+N FC G +
Sbjct: 384 PPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSAL- 442
Query: 74 VLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+ RS PN +T+T+L+ GLC R+ AA L ++ C PNV T+N L+N
Sbjct: 443 ---ELFRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNF- 498
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
F +GF+D+A EL QM + P+++TY ++ G
Sbjct: 499 ----------------------FCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITK 536
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
+A LL ++ +GV P+V+TF+ I+ L K +++EA ++ L IG+RP A V
Sbjct: 537 DCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALV 596
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
YN ++ G C ++ A + M S GC +Y ILI G + ++ A L +
Sbjct: 597 YNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLC 656
Query: 313 SKGI 316
S+G+
Sbjct: 657 SRGV 660
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 3/202 (1%)
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A+ + + G P+V ++ LC+ G+ +A+R+L G + F YNTL+
Sbjct: 59 ARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVA 118
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G+C G ++ A+ L + SM ++Y+ LI C + ALSL +ML +G +P
Sbjct: 119 GYCRYGHLDAARRL---IGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQP 175
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
+VV Y L + + E+A + DEM+ G + TY I+G+C+ + +A +L
Sbjct: 176 NVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLL 235
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
L C+ D +Y L+ GL
Sbjct: 236 NRLFSYGCQPDTVSYTTLLKGL 257
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 102/235 (43%), Gaps = 23/235 (9%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P P ++ L L + D L + P++ T+N+L+N FC+ G +
Sbjct: 449 PCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEA 508
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
++ +++ TPN +T+ +L G+ + +A L L G P+V T++++I
Sbjct: 509 IELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSII-- 566
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
G E V++A ++F +D + P + Y ++ G C
Sbjct: 567 ---------------------GILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLC 605
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
++ + A L M+ G PN T+ ++++ L + G + EA LL ++ GV
Sbjct: 606 KRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGV 660
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 79/201 (39%), Gaps = 23/201 (11%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP V +FN+L + D + L +++ G P+L TYN L + K
Sbjct: 483 RDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSED 542
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+L ++ +P+ +TF+S+I L E R+ EA +F + G P YN ++
Sbjct: 543 ALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILL 602
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
GL + +D A + M P+ TY +I G
Sbjct: 603 GLCKRHE-----------------------IDNAIDFLAYMVSNGCMPNESTYIILIEGL 639
Query: 191 CYANDWNEAKCLLIEMMDQGV 211
EA+ LL + +GV
Sbjct: 640 AREGLLKEAQDLLSMLCSRGV 660
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 120/365 (32%), Positives = 186/365 (50%), Gaps = 12/365 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F+ L +N H D L + + G PD+YTY+ +INC C G + +
Sbjct: 299 PDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGI 358
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ +++ S P+ TF +LI LC E+++ EA L +L V G PNV+T+N LIN L +
Sbjct: 359 VNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCK 418
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G +A+ LFEEM S G + KA +L +M+ VT
Sbjct: 419 VGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVT 478
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G C EA+ + +M G+ N +TFN ++D LC ++D+A+ L+D MI
Sbjct: 479 YNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMI 538
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G++PN YN+++ +C G +++A ++ +M + G V +Y+ LING CK + +
Sbjct: 539 SEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQ 598
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL L M KG+KP YN + LF + A LF EM G D +TY+
Sbjct: 599 AALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVF 658
Query: 363 DGLCK 367
GLC+
Sbjct: 659 RGLCR 663
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 192/386 (49%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F L + + L L R++ G P T N+LIN +CK+GRV
Sbjct: 229 PDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGY 288
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + + F P+ VTF++ + GLC + A + + GCEP+V+TY+T+IN L
Sbjct: 289 IQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCL-- 346
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
NGE ++AK + QM D PD T+ ++I C N
Sbjct: 347 ---------------CNNGEL------EEAKGIVNQMVDSGCLPDTTTFNTLIVALCTEN 385
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EA L E+ +G+ PNV TFN++++ LCK G A RL + M G P+ YN
Sbjct: 386 QLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYN 445
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+D C +G++ +A +L ME GC + +Y+ +I+G CK + IE A ++ +M
Sbjct: 446 ILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVT 505
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
GI + + +NTL L +++ A +L D+M +G+ + TY + + CK I +A
Sbjct: 506 GIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKA 565
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
++ +T+ E+D+ Y LI+GL
Sbjct: 566 ADILQTMTANGFEVDVVTYATLINGL 591
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 118/371 (31%), Positives = 184/371 (49%), Gaps = 14/371 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+N L LA+ + S + ++S G+ PD+ T+N +I+ C+ + ++L +
Sbjct: 164 YNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMS 223
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
P+ TFT+L++G E I A L ++ GC P T N LING + G
Sbjct: 224 SCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVG 283
Query: 140 VALN-LFEEMASG------------NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
AL + +E+A G NG G VD A ++ M E PDV TY++V
Sbjct: 284 DALGYIQQEIADGFEPDRVTFSTFVNG-LCQNGHVDHALKVLGLMLQEGCEPDVYTYSTV 342
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I C + EAK ++ +M+D G P+ TFN ++ LC +++EA L + G+
Sbjct: 343 INCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGL 402
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
PN + +N L++ C G + A LF M+S GCT +Y+ILI+ C + ++ AL
Sbjct: 403 SPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALD 462
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L EM G V YNT+ L + ++E A ++FD+M G+ + T+ T IDGLC
Sbjct: 463 LLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLC 522
Query: 367 KNSYIVEAVEL 377
I +A EL
Sbjct: 523 NAERIDDAAEL 533
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 149/315 (47%), Gaps = 23/315 (7%)
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
N + L+ L S+I + +T++ G EP+V T+NT+I+ L R A+ +
Sbjct: 160 NTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLML 219
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
EEM+S + + PD T+T+++ GF A L
Sbjct: 220 EEMSSCD-----------------------VAPDETTFTTLMEGFVEEGSIEAALRLKAR 256
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M + G P VT NV+++ CK G++ +A + I G P+ ++T ++G C G
Sbjct: 257 MSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGH 316
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
V+ A ++ M GC V++YS +IN C N E+E A + +M+ G PD +NT
Sbjct: 317 VDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNT 376
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L V L +Q+E A L E+ G++ + +T+ I+ LCK AV LF ++
Sbjct: 377 LIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSG 436
Query: 386 CELDIRAYNCLIDGL 400
C D YN LID L
Sbjct: 437 CTPDEVTYNILIDNL 451
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 147/320 (45%), Gaps = 24/320 (7%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
L ++ P V +FNIL L K + LF+ + S+G PD TYNILI+ C G+
Sbjct: 397 LTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGK 456
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
++ +L + S + VT+ ++I GLC RI EA +F ++ V G N T+NT
Sbjct: 457 LAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNT 516
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
LI+GL N E +D A EL QM E + P+ VTY S++
Sbjct: 517 LIDGLC------------------NAE-----RIDDAAELVDQMISEGLQPNNVTYNSIL 553
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
+C + ++A +L M G + +VVT+ +++ LCK + A +LL M G++
Sbjct: 554 THYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMK 613
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK-NKEIEGALS 306
P YN ++ A LF M +G F+Y I+ G C+ I+ A
Sbjct: 614 PTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFD 673
Query: 307 LYGEMLSKGIKPDVVIYNTL 326
EM G P+ + L
Sbjct: 674 FLVEMADNGFIPEFSSFRML 693
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 98/226 (43%), Gaps = 24/226 (10%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+FN L L + D L ++ S GL P+ TYN ++ +CK G +S +L +
Sbjct: 513 TFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTM 572
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ F + VT+ +LI GLC R A L +R+ G +P YN +I L+R +
Sbjct: 573 TANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNG 632
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN-DWN 197
AL+LF EM G PD TY V RG C
Sbjct: 633 RDALSLFREMTEVGGP-----------------------PDAFTYKIVFRGLCRGGGPIK 669
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
EA L+EM D G P +F ++ + L G D R ++L+++
Sbjct: 670 EAFDFLVEMADNGFIPEFSSFRMLAEGLLNLGMDDYLIRAIELIVE 715
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 122/376 (32%), Positives = 197/376 (52%), Gaps = 13/376 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ + LAKNK ++L +++ + G P + TYN L+N CKMGR+ +L +I
Sbjct: 167 TYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 226
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ + TP+ VT+TSLI GL E R EA LF ++ + G + Y LI GL + G
Sbjct: 227 VDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKI 286
Query: 139 IVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSV 186
A ++++ M S V G + A +F M+ + P+ V Y+++
Sbjct: 287 PQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSAL 346
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G C A + A +L +M P+ +T+N+++D LCK+G ++ A D M++ G
Sbjct: 347 IHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGC 406
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+P+ + YN L+ GFC G + A +F M S C+ V +Y LI+G CK +++ A
Sbjct: 407 KPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASL 466
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
+ M +G PD +Y++L L + ++E LFDEM+R GV A++ T I LC
Sbjct: 467 YFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFHLC 525
Query: 367 KNSYIVEAVELFRTLR 382
K + + EAV LF +R
Sbjct: 526 KANRVDEAVSLFNAIR 541
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 190/386 (49%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + N++ L K+ + F+ + G D++TY +++ K ++ +
Sbjct: 128 PSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVAL 187
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ +I + TP T+ +L+ GLC R+ EA L K+ GC P+V TY +LI+GL +
Sbjct: 188 MEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGK 247
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ A LF+EMA + G V D V YT++IRG A
Sbjct: 248 EKRSFEAYKLFKEMA-------LRGLV----------------LDTVCYTALIRGLLQAG 284
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+A + M QG P+VVT + ++D LCK G++ A R+ M G+ PN VY+
Sbjct: 285 KIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYS 344
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ G C +++ A E+ M+ CT +Y+ILI+G CK+ ++E A + + EML
Sbjct: 345 ALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEA 404
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G KPDV YN L + + A +FD+M + + TY T I GLCK + +A
Sbjct: 405 GCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKA 464
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
F+ ++ C D Y+ L+DGL
Sbjct: 465 SLYFQHMKERGCPPDSFVYSSLVDGL 490
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 112/265 (42%), Gaps = 26/265 (9%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF M R P ++ L L K + D L + ++ PD TYNILI+
Sbjct: 327 IFKSM-EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGL 385
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G V +L + P+ T+ L+ G C A +F + C PNV
Sbjct: 386 CKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNV 445
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TY TLI+GL + + KA F MK+ PD
Sbjct: 446 VTYGTLISGLCKRRQ-----------------------LTKASLYFQHMKERGCPPDSFV 482
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+S++ G C + E C+L + M++ N T ++ LCK ++DEA L + +
Sbjct: 483 YSSLVDGLCKSGKL-EGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIR 541
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVN 267
+ G+ P+ + YN+++ + +VN
Sbjct: 542 KEGM-PHPYAYNSIISTLIKSAKVN 565
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 111/237 (46%), Gaps = 27/237 (11%)
Query: 2 CIFDYMLNMRPS--PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILI 59
C + + M+ + P ++NIL L K+ + + F + G PD+YTYNIL+
Sbjct: 358 CALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILV 417
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 119
+ FCK G V + S +PN VT+ +LI GLC ++ +A+ F ++ GC
Sbjct: 418 SGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCP 477
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPD 179
P+ F Y++L++GL ++G LF+EM GV +
Sbjct: 478 PDSFVYSSLVDGLCKSGKLEGGCMLFDEMERS----GV--------------------AN 513
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
T T +I C AN +EA L + +G+ P+ +N I+ L K+ K++ +R
Sbjct: 514 SQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISTLIKSAKVNPCTR 569
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 1/159 (0%)
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G + + N L+D F T R A L + + V ++++LI GYC +E E
Sbjct: 52 RFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPE 111
Query: 303 GALSLYGEMLSK-GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A ++ EM G+ P + +N + L + +V A F+ +G D TY
Sbjct: 112 EAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAI 171
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+D L KN I +AV L + C I YN L++GL
Sbjct: 172 VDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGL 210
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Query: 269 AKELFVSMES--MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
A ELF + S G H+V + + L++ + + K A +L L+ PDV +N L
Sbjct: 41 AWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVL 100
Query: 327 FVVLFEIHQVERAFKLFDEMQRD-GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
+ E AF + EM+ D GVA T+ + GLCK+ ++ A++ F T
Sbjct: 101 ITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNG 160
Query: 386 CELDIRAYNCLIDGL 400
C +DI Y ++D L
Sbjct: 161 CTIDIHTYTAIVDWL 175
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 119/349 (34%), Positives = 183/349 (52%), Gaps = 23/349 (6%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
P++YTYNILI FC +G + G G + R+ PN VT+ +LI C RI EA L
Sbjct: 8 PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL 169
+ G +PN+ +YN +INGL R G A + EEM G +GF
Sbjct: 68 LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEM-------GYKGFT-------- 112
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
PD VTY +++ G+C ++++A + EM+ GV P+VVT+ +++ +CK
Sbjct: 113 --------PDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKAR 164
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
++ A D M G+RPN Y TL+DGF G +N A + M G + +V +Y+
Sbjct: 165 NLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYN 224
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
I+G+C + +E AL + EM+ KG+ PDVV Y+T+ +++RAF++ EM
Sbjct: 225 AFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEK 284
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
GV+ D TY + I GLC+ + EA +L + + + D Y LI+
Sbjct: 285 GVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLIN 333
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 185/384 (48%), Gaps = 13/384 (3%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ R SP V ++NIL L F + G P++ TYN LI+ +CKMG
Sbjct: 1 MIRSRVSPN-VYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMG 59
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
R+ F +L + PN +++ +I GLC E + EA + ++ G P+ TYN
Sbjct: 60 RIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYN 119
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDE 174
TL+NG + G+ AL + EM V + +++A E F QM+
Sbjct: 120 TLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIR 179
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
+ P+ TYT++I GF NEA +L EM + G P+VVT+N + C +M+EA
Sbjct: 180 GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEA 239
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
++ M++ G+ P+ Y+T++ GFC G ++RA ++ M G + +YS LI G
Sbjct: 240 LGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQG 299
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
C+ + + A L EML G+ PD Y TL + +A L DEM G D
Sbjct: 300 LCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPD 359
Query: 355 TWTYRTFIDGLCKNSYIVEAVELF 378
TY I+GL K + EA L
Sbjct: 360 AVTYSVLINGLNKQARTREAKRLL 383
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 200/413 (48%), Gaps = 29/413 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L K D L K ++S G+ P+L +YN++IN C+ G + + +
Sbjct: 43 PNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEI 102
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + FTP+ VT+ +L+ G C E +A + ++ G P+V TY LIN + +
Sbjct: 103 LEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCK 162
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+ A+ F++M F +G +++A + +M + +P VVT
Sbjct: 163 ARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVT 222
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y + I G C EA ++ EM+++G+ P+VV+++ I+ C+ G++D A ++ M+
Sbjct: 223 YNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMV 282
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ GV P+A Y++L+ G C R+ A +L M MG F+Y+ LIN YC ++
Sbjct: 283 EKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLN 342
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK-LFDEMQRDGVAADTWTYRTF 361
AL L+ EM+ KG PD V Y+ L L + + A + LF + + V +D TY T
Sbjct: 343 KALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDV-TYDTL 401
Query: 362 ID---------------GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I+ G C + EA +F ++ + YN +I G
Sbjct: 402 IENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHG 454
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 170/349 (48%), Gaps = 35/349 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L + K ++ + + F ++ GL P+ TY LI+ F + G ++ + +
Sbjct: 148 PSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRI 207
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + S F+P+ VT+ + I G C R+ EA + ++ G P+V +Y+T+I+G R
Sbjct: 208 LNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCR 267
Query: 135 TGHTIVALNLFEEMASGNGEFGV-----------EGFVD-----KAKELFLQMKDENINP 178
G A + +EM E GV +G + +A +L +M D + P
Sbjct: 268 KGELDRAFQMKQEMV----EKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPP 323
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D TYT++I +C D N+A L EM+ +G P+ VT++V+++ L K + EA RLL
Sbjct: 324 DEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLL 383
Query: 239 DLMIQIGVRPNAFVYNTLMD---------------GFCLTGRVNRAKELFVSMESMGCTH 283
+I P+ Y+TL++ GFC+ G ++ A +F SM
Sbjct: 384 FKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKP 443
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
Y+++I+G+C+ + A +LY EM+ G P V TL LF+
Sbjct: 444 GEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFK 492
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 114/224 (50%)
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
++P+V TY +IRGFC + + EM G PNVVT+N ++D CK G++DEA
Sbjct: 6 VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
LL M G++PN YN +++G C G + A E+ M G T +Y+ L+NGY
Sbjct: 66 GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
CK AL ++ EM+ G+ P VV Y L + + + RA + FD+M+ G+ +
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
TY T IDG + + EA + + + YN I G
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHG 229
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 99/194 (51%)
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M+ V PNV T+N+++ C G++ + M + G PN YNTL+D +C GR
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
++ A L SM S G + SY+++ING C+ ++ A + EM KG PD V YNT
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L + +A + EM R+GV+ TY I+ +CK + A+E F +RI
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180
Query: 386 CELDIRAYNCLIDG 399
+ R Y LIDG
Sbjct: 181 LRPNERTYTTLIDG 194
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 10/225 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ L L + + L + + GL PD +TY LIN +C G ++ +
Sbjct: 288 PDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHL 347
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ F P+AVT++ LI GL ++R EA L KL P+ TY+TLI
Sbjct: 348 HDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSN 407
Query: 135 TG-HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
++VAL G F ++G + +A +F M + N P Y +I G C
Sbjct: 408 IEFKSVVAL------IKG---FCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRG 458
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
+ +A L EM+ G P+ VT ++ L K G +E S ++
Sbjct: 459 GNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVI 503
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 15/150 (10%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP ++ L + L L + G PD TY++LIN K R
Sbjct: 322 PPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKR 381
Query: 74 VLGRILRSCFTPNAVTF---------------TSLIKGLCAESRIMEAAALFTKLRVFGC 118
+L +++ P+ VT+ +LIKG C + + EA +F +
Sbjct: 382 LLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNH 441
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEM 148
+P YN +I+G R G+ A NL++EM
Sbjct: 442 KPGEAVYNVIIHGHCRGGNLPKAFNLYKEM 471
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%)
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M+ + P+V YN L + ++++ F EM+R+G + TY T ID CK
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I EA L +++ + ++ +YN +I+GL
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGL 90
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 188/386 (48%), Gaps = 26/386 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + D L + + PD YTYN LI C GR + VV
Sbjct: 122 PDVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRGLCGRGRTGNALVV 178
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +LR P+ VT+T L++ C S +A L ++R GC P++ TYN ++NG+ +
Sbjct: 179 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQ 238
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
EG VD A E + P+ V+Y V++G C A
Sbjct: 239 -----------------------EGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAE 275
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
W +A+ L+ EM +G PNVVTFN+++ LC+ G ++ A +LD + + G PN+ YN
Sbjct: 276 RWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYN 335
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
++ FC +++RA M S GC + SY+ L+ C+ E++ A+ L ++ K
Sbjct: 336 PILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDK 395
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G P ++ YNT+ L + + + A +L +EM G+ D TY T GLC+ I EA
Sbjct: 396 GCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEA 455
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ F ++ + + YN ++ GL
Sbjct: 456 IRAFCKVQDMGIRPNTVLYNAILLGL 481
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 153/302 (50%), Gaps = 23/302 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S+NI+ L + ++ L ++ G P++ T+N+LI+ C+ G V V
Sbjct: 259 PNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEV 318
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +I + TPN++++ ++ C + ++ A A + GC P++ +YNTL+ L R
Sbjct: 319 LDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCR 378
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G VD A EL Q+KD+ P +++Y +VI G A
Sbjct: 379 GGE-----------------------VDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAG 415
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EA LL EM+ +G+QP+++T++ I LC+ +++EA R + +G+RPN +YN
Sbjct: 416 KTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYN 475
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
++ G C + A +LF+ M S GC +Y+ILI G ++ A L GE+ S+
Sbjct: 476 AILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSR 535
Query: 315 GI 316
G+
Sbjct: 536 GV 537
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 143/310 (46%), Gaps = 31/310 (10%)
Query: 91 TSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS 150
+LIK LCA R EA + CEP+V YN ++ G
Sbjct: 98 AALIKKLCASGRTAEARRVLA-----ACEPDVMAYNAMVAG------------------- 133
Query: 151 GNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG 210
+ V G +D A+ L M E PD TY ++IRG C A +L +M+ +G
Sbjct: 134 ----YCVTGQLDAARRLVADMPME---PDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRG 186
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
P+VVT+ ++++ CK +A +LLD M G P+ YN +++G C GRV+ A
Sbjct: 187 CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAI 246
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
E S+ S GC SY+I++ G C + E A L EM KG P+VV +N L L
Sbjct: 247 EFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFL 306
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
VE A ++ D++ + G ++ +Y + CK + A+ + C DI
Sbjct: 307 CRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDI 366
Query: 391 RAYNCLIDGL 400
+YN L+ L
Sbjct: 367 VSYNTLLTAL 376
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 51/124 (41%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +++ + L + + + F ++ G+ P+ YN ++ CK + +
Sbjct: 434 PDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDL 493
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ + PN T+T LI+GL E + EA L +L G I L
Sbjct: 494 FIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVVSKGLINKAAIRLLDG 553
Query: 135 TGHT 138
T HT
Sbjct: 554 TTHT 557
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 188/386 (48%), Gaps = 26/386 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+N + D L + + PD YTYN LI C GR + V
Sbjct: 118 PDVMSYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNALAV 174
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +LR P+ VT+T L++ C S +A L ++R GC P++ TYN ++NG+ +
Sbjct: 175 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQ 234
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
EG VD A E + P+ V+Y V++G C A
Sbjct: 235 -----------------------EGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAE 271
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
W +A+ L+ EM +G PNVVTFN+++ LC+ G ++ A +LD + + G PN+ YN
Sbjct: 272 RWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYN 331
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
++ FC +++RA M S GC + SY+ L+ C+ E++ A+ L ++ K
Sbjct: 332 PILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDK 391
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G P ++ YNT+ L + + E A +L +EM G+ D TY T GLC+ I EA
Sbjct: 392 GCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEA 451
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
++ F ++ + + YN ++ GL
Sbjct: 452 IKAFCKVQDMGIRPNTVLYNAILLGL 477
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 145/310 (46%), Gaps = 31/310 (10%)
Query: 91 TSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS 150
+LIK LCA R EA + CEP+V +YN ++ G
Sbjct: 94 AALIKKLCASGRTAEARRVLAS-----CEPDVMSYNAMVAG------------------- 129
Query: 151 GNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG 210
+ V G +D A+ L M E PD TY ++IRG C + A +L +M+ +G
Sbjct: 130 ----YCVTGQLDNARRLVAAMPME---PDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRG 182
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
P+VVT+ ++++ CK +A +LLD M G P+ YN +++G C GRV+ A
Sbjct: 183 CVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAM 242
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
E S+ S GC SY+I++ G C + E A L EM KG P+VV +N L L
Sbjct: 243 EFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFL 302
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
VE A ++ D++ + G ++ +Y + CK + A+ + C DI
Sbjct: 303 CRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDI 362
Query: 391 RAYNCLIDGL 400
+YN L+ L
Sbjct: 363 VSYNTLLTAL 372
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 152/302 (50%), Gaps = 23/302 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S+NI+ L + ++ L ++ G P++ T+N+LI+ C+ G V +
Sbjct: 255 PNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEI 314
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +I + TPN++++ ++ C + ++ A A + GC P++ +YNTL+ L R
Sbjct: 315 LDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCR 374
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G VD A EL Q+KD+ P +++Y +VI G A
Sbjct: 375 GGE-----------------------VDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAG 411
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EA LL EM+ +G+QP+++T++ I LC+ G+++EA + + +G+RPN +YN
Sbjct: 412 KTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYN 471
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
++ G C + A +LF M S GC +Y+ILI G ++ A + E+ S+
Sbjct: 472 AILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSR 531
Query: 315 GI 316
G+
Sbjct: 532 GV 533
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 58/159 (36%), Gaps = 35/159 (22%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF-- 72
P + S+N + L K + L L + + GL PD+ TY+ + + C+ GR+
Sbjct: 395 PVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKA 454
Query: 73 ------------------VVLGRILRSC-------FT--------PNAVTFTSLIKGLCA 99
++LG R FT PN T+T LI+GL
Sbjct: 455 FCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAY 514
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
E + EA + +L G I L T HT
Sbjct: 515 EGLVKEAREMMAELCSRGVVSKTLVNKGAIRLLDGTMHT 553
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 129/462 (27%), Positives = 209/462 (45%), Gaps = 76/462 (16%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L L K + V L + + G PD ++YN ++ C C+ G+ +
Sbjct: 195 PDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKI 254
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ P+ VT+ SL+ G C S++ EA L + C P V TY TLI G R
Sbjct: 255 LEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSR 314
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
A + E+M + G +++A EL M +++ PDVVT
Sbjct: 315 ADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVT 374
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+ ++ G C ++A+ LL M+++G QPN+VTFN ++D CK GK+DE ++L+LM
Sbjct: 375 YSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMK 434
Query: 243 QIGVRPNAFVYNTLMDGFCL-----------------------------TGRVNRAKELF 273
++ P+ Y+TL+DG+C TG+V A+E+
Sbjct: 435 EVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVM 494
Query: 274 VSMESMGCTHT-----------------------------------VFSYSILINGYCKN 298
M GC T +++YSILING CK
Sbjct: 495 DLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKT 554
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
K +E A+++ ML KG PDV Y +L +I++++ A++ F M+ G D Y
Sbjct: 555 KRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAY 614
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I G C++ + +A+E+ + + C D Y L+ L
Sbjct: 615 NILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSL 656
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 205/410 (50%), Gaps = 19/410 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ ML P + +++ GC N D L +++ +GL PD YN L+N
Sbjct: 149 VLKMMLERSCVPDVITYTSLIVGCCQTNA-LDEARKLMEKMKESGLTPDTVAYNALLNGL 207
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK ++ +L ++ + P+ ++ +++ LC + EA + K+ C P+V
Sbjct: 208 CKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDV 267
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
TYN+L++G + A L E+M G F + A +
Sbjct: 268 VTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMED 327
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M I+PD+VTY ++ G C A EA LL M+++ P+VVT++++++ LCK GK
Sbjct: 328 MFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGK 387
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+D+A LL++M++ G +PN +NT++DGFC G+V+ ++ M+ + CT V +YS
Sbjct: 388 VDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYST 447
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI+GYCK ++ A ++ GI PD Y+++ L +VE A ++ D M + G
Sbjct: 448 LIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQG 501
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ Y I GLC EA+++ + + CE ++ Y+ LI+GL
Sbjct: 502 CPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGL 551
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 119/398 (29%), Positives = 194/398 (48%), Gaps = 18/398 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ IL L + + D L + PD YN LI CKMG++ V
Sbjct: 90 PTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNV 149
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L P+ +T+TSLI G C + + EA L K++ G P+ YN L+NGL +
Sbjct: 150 LKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCK 209
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
L EEM E G ++A ++ +M ++ PDVVT
Sbjct: 210 QNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVT 269
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S++ GFC + +EA+ LL +M+ + P V+T+ ++ + ++ +A R+++ M
Sbjct: 270 YNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMF 329
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ P+ YN L+DG C G++ A EL M C V +YSIL+NG CK +++
Sbjct: 330 KAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVD 389
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L ML +G +P++V +NT+ + +V+ K+ + M+ D TY T I
Sbjct: 390 DARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLI 449
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
DG CK + + +A IL D +Y+ +++GL
Sbjct: 450 DGYCKANRMQDA------FAILGISPDKASYSSMLEGL 481
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 199/401 (49%), Gaps = 16/401 (3%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
PS P ++ L ++ + VL + + + PD+ T+N ++ +C++G +
Sbjct: 19 PSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRA 78
Query: 72 FVVL-GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
G++ S P A T+ LI GLC RI EA L ++ C P+ YN LI
Sbjct: 79 LSHFRGKMWCS---PTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIA 135
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINP 178
GL + G A N+ + M + V + +D+A++L +MK+ + P
Sbjct: 136 GLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTP 195
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D V Y +++ G C N E LL EM++ G +P+ ++N ++ LC++GK +EA ++L
Sbjct: 196 DTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKIL 255
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
+ MI+ P+ YN+LMDGFC +++ A+ L M C TV +Y+ LI G+ +
Sbjct: 256 EKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRA 315
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+ A + +M GI PD+V YN L L + ++E A +L + M A D TY
Sbjct: 316 DRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTY 375
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
++GLCK + +A L + C+ ++ +N +IDG
Sbjct: 376 SILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDG 416
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 185/375 (49%), Gaps = 14/375 (3%)
Query: 38 SLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 97
S F+ S P TY LI F + G + +L F+P+ +T +++K
Sbjct: 10 SFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAY 69
Query: 98 CAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV 157
C + A + F C P FTY LI+GL + A L +EM +
Sbjct: 70 CQIGDLDRALSHFRG--KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDA 127
Query: 158 E------------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
G +D A+ + M + + PDV+TYTS+I G C N +EA+ L+ +
Sbjct: 128 AVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEK 187
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M + G+ P+ V +N +++ LCK +++E S+LL+ M++ G P+ F YNT++ C +G+
Sbjct: 188 MKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGK 247
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
A ++ M C V +Y+ L++G+CK +++ A L +M+ + P V+ Y T
Sbjct: 248 YEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTT 307
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L ++ A+++ ++M + G++ D TY +DGLCK + EA EL +
Sbjct: 308 LIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKD 367
Query: 386 CELDIRAYNCLIDGL 400
C D+ Y+ L++GL
Sbjct: 368 CAPDVVTYSILVNGL 382
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 142/298 (47%), Gaps = 25/298 (8%)
Query: 102 RIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFV 161
R +E + F + +P+ TY LI G R G++ + L + EM +
Sbjct: 4 RPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLA----------- 52
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
+PDV+T+ ++++ +C D + A M P T+ ++
Sbjct: 53 ------------RRFSPDVITHNTILKAYCQIGDLDRALSHFRGKM--WCSPTAFTYCIL 98
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
+ LC+ ++DEA +LLD MIQ P+A VYN L+ G C G+++ A+ + M C
Sbjct: 99 IHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSC 158
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
V +Y+ LI G C+ ++ A L +M G+ PD V YN L L + +Q+E K
Sbjct: 159 VPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSK 218
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
L +EM G DT++Y T + LC++ EA ++ + KC D+ YN L+DG
Sbjct: 219 LLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDG 276
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++ + PP + ++ G L + D L + + ++ G P+LYTY+ILIN CK
Sbjct: 496 LMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTK 555
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
RV VL +L P+ T+TSLI G C +++ A F +R GCEP+ YN
Sbjct: 556 RVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYN 615
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
LI+G ++G+ V+KA E+ M ++ NPD TY S+
Sbjct: 616 ILISGFCQSGN-----------------------VEKAIEVMQLMLEKGCNPDAATYFSL 652
Query: 187 IRGF 190
+R
Sbjct: 653 MRSL 656
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D ML + P V ++ L K D FK + +G PD YNILI+ F
Sbjct: 563 VLDVMLE-KGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGF 621
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 100
C+ G V V+ +L P+A T+ SL++ L E
Sbjct: 622 CQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSLTTE 659
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 122/365 (33%), Positives = 191/365 (52%), Gaps = 23/365 (6%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 95
L LF ++ +G D+ Y LIN K + + R+L + N T+ +I
Sbjct: 28 ALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTYGLVID 87
Query: 96 GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEF 155
LC + ++ +F ++ G PNV Y++LINGL R G A+NLF+EM S
Sbjct: 88 SLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVS----- 142
Query: 156 GVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNV 215
+ I +V+TY S+I C W EA +M+ +G+ P+V
Sbjct: 143 ------------------QGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDV 184
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
VTF ++D L K GK+ EA ++ +LMI+ G PN YN+L++G CL +++ A LF
Sbjct: 185 VTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEV 244
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
M G V SY+ LINGYC + + E A++L+ +M + + P + Y L L++ +
Sbjct: 245 MVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGR 304
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
+ A +LF+ MQ G + TY +DGLCKN I EA+++FR+L+ +K + IR Y+
Sbjct: 305 IRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSI 364
Query: 396 LIDGL 400
LI G+
Sbjct: 365 LIGGM 369
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 188/380 (49%), Gaps = 24/380 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+NM P + +++ G K + V +LF + S G+ ++ TYN LI+
Sbjct: 101 MFREMINMGICPNVIVYSSLINGLCRVGKLREAV-NLFDEMVSQGIKANVITYNSLIHAS 159
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ G +++ P+ VTFT+LI L + ++ EA +F + G PN+
Sbjct: 160 CRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNI 219
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TYN+L+NGL L +M D A LF M + I DV++
Sbjct: 220 VTYNSLLNGLC----------LHHQM-------------DHAVRLFEVMVERGIKIDVIS 256
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G+C + EA L +M + + P++ T+ +++ L +NG++ A L + M
Sbjct: 257 YNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQ 316
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G P+ Y L+DG C G + A ++F S++S+ ++ YSILI G + + E
Sbjct: 317 ICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWE 376
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ ++ E+ + G+ P++V YN + L + ++ A +LF +M+ G D ++ I
Sbjct: 377 SAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFII 436
Query: 363 DGLCKNSYIVEAVELFRTLR 382
G + + + +A+E + +R
Sbjct: 437 RGFLQENQVQKAMEFLKRMR 456
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 142/283 (50%), Gaps = 23/283 (8%)
Query: 117 GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI 176
G +PN+ T +TL+ G+ G + AL LF++M G +G
Sbjct: 4 GYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRS----GFQG----------------- 42
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
D++ Y +I A L M+ + N T+ +++D LCK+G + +
Sbjct: 43 --DILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLK 100
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+ MI +G+ PN VY++L++G C G++ A LF M S G V +Y+ LI+ C
Sbjct: 101 MFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASC 160
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
+ + A + +M+ +GI PDVV + TL L + +V+ A+K+F+ M + G A +
Sbjct: 161 RFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIV 220
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
TY + ++GLC + + AV LF + ++D+ +YN LI+G
Sbjct: 221 TYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLING 263
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 99/194 (51%)
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
M G QPN+VT + ++ +C GK+ +A L D M + G + + +Y L++ T +
Sbjct: 1 MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
RA EL M S C+ F+Y ++I+ CK+ L ++ EM++ GI P+V++Y++L
Sbjct: 61 RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
L + ++ A LFDEM G+ A+ TY + I C+ EA F +
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGI 180
Query: 387 ELDIRAYNCLIDGL 400
D+ + LID L
Sbjct: 181 LPDVVTFTTLIDHL 194
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 63/140 (45%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
P + ++ +L L KN + + +F+ L S P + Y+ILI + R
Sbjct: 320 QSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAM 379
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+ I PN VT+ +I GLC E +++EA LF ++ GCE + ++N +I G
Sbjct: 380 EIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGF 439
Query: 133 YRTGHTIVALNLFEEMASGN 152
+ A+ + M N
Sbjct: 440 LQENQVQKAMEFLKRMREKN 459
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 61/116 (52%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++IL G + + + +++ + +F + + GL P++ TYNI+IN CK G++ +
Sbjct: 357 PSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERL 416
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
++ S + ++F +I+G E+++ +A ++R PN L+N
Sbjct: 417 FVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVN 472
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 137/396 (34%), Positives = 194/396 (48%), Gaps = 18/396 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ L L K K + L ++ S G PD+YTY +I+ C R+ L +
Sbjct: 13 TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
TPN VT+T LI GLC R+ EA AL +K+R C P TYN+LI+GL +
Sbjct: 73 ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKAERA 131
Query: 139 IVALNLFEEMA-SG------NGEFGVEGFV-----DKAKELFLQMKDENINPDVVTYTSV 186
A +L EEM SG + GF D A +F Q+ PDVVTY+ +
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191
Query: 187 IRGFCYANDWNEAKCLLIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
I G C EA L M+ G PN VT+N ++ C+ GKMDEA LL+ M + G
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG 251
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
P+ Y TLM+GFC R++ A +L M G T V +++ L++G C+ + A+
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAV 311
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK-LFDEMQRDGVAADTWTYRTFIDG 364
+ GEM K P V YNT+ +Q+E A K + +EM + ++ I G
Sbjct: 312 HILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD---CPPNVVSFNIMIRG 368
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LCK + EA+EL R +C D+ Y +IDGL
Sbjct: 369 LCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 125/400 (31%), Positives = 204/400 (51%), Gaps = 17/400 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L + + + L P++ TY +LI+ CK GRV +
Sbjct: 44 PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVAL 103
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ + C P AVT+ SLI GLC R EA L ++ GC P++FTY TLI G +
Sbjct: 104 LSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCK 162
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM-KDENINPDVV 181
+ + AL +FE++ + V EG + +A +LF +M K + P+ V
Sbjct: 163 SKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTV 222
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY S+I GFC +EA LL M + G P+VVT+ +M+ CK ++D+A LL+ M
Sbjct: 223 TYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQM 282
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G+ P+ + +LMDG C R++ A + M C+ TV++Y+ +++GYC+ ++
Sbjct: 283 TRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQL 342
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A E + P+VV +N + L ++++ A +L +E +R D Y T
Sbjct: 343 EEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTV 400
Query: 362 IDGLCKNSYIVEAVELFRT-LRILKCELDIRAYNCLIDGL 400
IDGLC+ + EA ++R L C + Y+ L+ GL
Sbjct: 401 IDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGL 440
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 124/387 (32%), Positives = 190/387 (49%), Gaps = 31/387 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L L K + L + + +G PD++TY LI FCK + V
Sbjct: 113 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 172
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPNVFTYNTLINGLY 133
+++ F P+ VT++ LI GLC E R+ EA LF ++ G C PN TYN+LI+G
Sbjct: 173 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 232
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
R G A+NL E MA +PDVVTYT+++ GFC
Sbjct: 233 RMGKMDEAMNLLERMAETGS-----------------------SPDVVTYTTLMNGFCKL 269
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
++A LL +M +G+ P+VVTF +MD LC+ ++ +A +L M + P + Y
Sbjct: 270 ARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTY 329
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
NT++DG+C ++ A++ +E M C V S++I+I G CK A+ L E
Sbjct: 330 NTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARR 387
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM-QRDGVAADTWTYRTFIDGLCKNSYIV 372
+ PDVV+Y T+ L +V+ A +++ +M + G ++ TY T + GLC +
Sbjct: 388 RRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLD 447
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDG 399
A R C +I YN LID
Sbjct: 448 RA----RGYIEKGCVPNIGTYNLLIDA 470
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 183/350 (52%), Gaps = 25/350 (7%)
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 110
D TY LI CK+ R+ + LG+++ F P+ T+T++I LC E+R+ EA
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQ 170
++ PNV TY LI+GL + G VD+A L +
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGR-----------------------VDEAVALLSK 106
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M+ + + P VTY S+I G C A +EA LL EM+ G P++ T+ ++ CK+ K
Sbjct: 107 MRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 165
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMGCTHTVFSYS 289
D+A R+ + ++ G RP+ Y+ L+DG C GR+ A +LF M +S C +Y+
Sbjct: 166 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 225
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
LI+G+C+ +++ A++L M G PDVV Y TL ++ +++ A+ L ++M R
Sbjct: 226 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 285
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G+ D T+ + +DGLC+ + + +AV + +R C + YN ++DG
Sbjct: 286 GLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDG 335
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 161/314 (51%), Gaps = 30/314 (9%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ P ++N L + D ++L +R+ TG PD+ TY L+N F
Sbjct: 207 LFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGF 266
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK+ R+ + +L ++ R TP+ VTFTSL+ GLC E+R+ +A + ++R C P V
Sbjct: 267 CKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTV 326
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+TYNT+++G R N EE A++ L+ D P+VV+
Sbjct: 327 YTYNTILDGYCRA-------NQLEE----------------ARKFMLEEMD--CPPNVVS 361
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ +IRG C N +EA L+ E + P+VV + ++D LC+ K+DEA R+ M+
Sbjct: 362 FNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKML 421
Query: 243 -QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G PN+ Y+TL+ G C G ++RA+ GC + +Y++LI+ + K
Sbjct: 422 EEPGCLPNSITYSTLVTGLCNAGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKANRD 477
Query: 302 EGALSLYGEMLSKG 315
E A L +M+ +G
Sbjct: 478 EDARELLDDMVQRG 491
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 168/338 (49%), Gaps = 31/338 (9%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG-LFPDLYTYNILINCFCKMGRVSHGFV 73
P V +++ L L K + LF R+ +G P+ TYN LI+ FC+MG++
Sbjct: 183 PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN 242
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L R+ + +P+ VT+T+L+ G C +R+ +A L ++ G P+V T+ +L++GL
Sbjct: 243 LLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLC 302
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
R E + A + +M+ ++ +P V TY +++ G+C A
Sbjct: 303 R-----------------------ENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRA 339
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
N EA+ ++E MD PNVV+FN+++ LCK + EA L++ + P+ +Y
Sbjct: 340 NQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMY 397
Query: 254 NTLMDGFCLTGRVNRAKELFVSM-ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
T++DG C +V+ A ++ M E GC +YS L+ G C G L +
Sbjct: 398 TTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCN----AGMLDRARGYI 453
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
KG P++ YN L + ++ E A +L D+M + G
Sbjct: 454 EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 147/284 (51%), Gaps = 25/284 (8%)
Query: 117 GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI 176
C + TY +LI GL + AL +M S +GF
Sbjct: 6 SCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVS-------KGF---------------- 42
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
+PDV TYT+VI C N +EA+ L EM ++ + PNVVT+ V++D LCK G++DEA
Sbjct: 43 HPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVA 102
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
LL M + V P A YN+L+ G C R + A +L M GC +F+Y+ LI G+C
Sbjct: 103 LLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFC 161
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA-ADT 355
K+K+ + AL ++ +++++G +PDVV Y+ L L + +++ A LF M + G +T
Sbjct: 162 KSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNT 221
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
TY + I G C+ + EA+ L + D+ Y L++G
Sbjct: 222 VTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNG 265
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
C+ +Y+ LI G CK K +E AL G+M+SKG PDV Y + L +++ A
Sbjct: 6 SCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEA 65
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
K +EM + + TY IDGLCK + EAV L +R KC YN LI G
Sbjct: 66 RKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLISG 124
Query: 400 L 400
L
Sbjct: 125 L 125
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 200/398 (50%), Gaps = 15/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ +L + K+ + +++ + + G P++ TYN++IN C+ GRV +
Sbjct: 185 PSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEI 244
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R+ F P+ V++T+++KGLCA R + LF ++ C PN T++ L+ R
Sbjct: 245 LNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCR 304
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G A+ + ++M+ +G VD A + M NPD ++
Sbjct: 305 GGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTIS 364
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+V+RG C A W AK LL EM+ + PN VTFN + LC+ G +++A +L++LM
Sbjct: 365 YTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMP 424
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G YN L+ GFC+ GRV+ A ELF ++ C +Y+ L+ G C + ++
Sbjct: 425 EYGCSVGIVTYNALVHGFCVQGRVDSALELF---NNLPCEPNTITYTTLLTGLCHAERLD 481
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L EM+ K + V +N L + VE A +L ++M G + T+ T +
Sbjct: 482 AAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLL 541
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
DG+ K+ EA+EL L LD Y+ ++D L
Sbjct: 542 DGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVL 579
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 161/321 (50%), Gaps = 27/321 (8%)
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
R C P+ VT+T L++ +C S EA + ++R GC PN+ TYN +ING+ R
Sbjct: 181 RGC-QPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCR----- 234
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
EG VD AKE+ ++ PD+V+YT+V++G C A W++
Sbjct: 235 ------------------EGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDV 276
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
K L EM+D+ PN VTF++++ C+ G ++ A ++L M Q G PN + N +++
Sbjct: 277 KVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINA 336
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
C GRV+ A + +M GC SY+ ++ G C+ E A L EM+ K P+
Sbjct: 337 ICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPN 396
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
V +NT +L + +E+A KL + M G + TY + G C + A+ELF
Sbjct: 397 EVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFN 456
Query: 380 TLRILKCELDIRAYNCLIDGL 400
L CE + Y L+ GL
Sbjct: 457 N---LPCEPNTITYTTLLTGL 474
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 184/399 (46%), Gaps = 17/399 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S+ + L + +D V LF + P+ T+++L+ FC+ G V V
Sbjct: 255 PDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQV 314
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ + TPN +I +C + R+ +A + ++GC P+ +Y T++ GL R
Sbjct: 315 LQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCR 374
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
G A L EM N +G +++A +L M + + +VT
Sbjct: 375 AGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVT 434
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y +++ GFC + A +E+ + +PN +T+ ++ LC ++D A+ LL M
Sbjct: 435 YNALVHGFCVQGRVDSA----LELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAEM 490
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
IQ NA +N L+ FC G V A EL M GCT + +++ L++G K+
Sbjct: 491 IQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNS 550
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E AL L ++SKG+ D + Y+++ VL + E A ++ +Q G+ Y
Sbjct: 551 EEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKI 610
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ LCK +A++ F + C + Y LI+GL
Sbjct: 611 LFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGL 649
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 183/384 (47%), Gaps = 16/384 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M++ + P V +F++L + + + + ++++ G P+ NI+IN
Sbjct: 279 LFAEMVDKKCVPNEV-TFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAI 337
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK GRV + L + P+ +++T++++GLC R A L ++ C PN
Sbjct: 338 CKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNE 397
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG------------VEGFVDKAKELFLQ 170
T+NT I L + G A+ L E M G V+G VD A ELF
Sbjct: 398 VTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNN 457
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ E P+ +TYT+++ G C+A + A LL EM+ + N VTFNV++ C+ G
Sbjct: 458 LPCE---PNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGF 514
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
++EA L++ M++ G PN +NTL+DG A EL + S G + +YS
Sbjct: 515 VEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSS 574
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+++ + E A+ + + G++P V +YN + L + + ++A F M +G
Sbjct: 575 VVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNG 634
Query: 351 VAADTWTYRTFIDGLCKNSYIVEA 374
+ TY I+GL + EA
Sbjct: 635 CMPNESTYIILIEGLAHEGLLKEA 658
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 151/344 (43%), Gaps = 9/344 (2%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
NI+ + K D + G PD +Y ++ C+ GR H +L ++R
Sbjct: 331 NIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVR 390
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
PN VTF + I LC + I +A L + +GC + TYN L++G G
Sbjct: 391 KNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDS 450
Query: 141 ALNLFEEMASGNGEFGVEGFV---------DKAKELFLQMKDENINPDVVTYTSVIRGFC 191
AL LF + + D A EL +M ++ + VT+ ++ FC
Sbjct: 451 ALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFC 510
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
EA L+ +MM+ G PN++TFN ++D + K+ +EA LL ++ GV +
Sbjct: 511 QKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTI 570
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
Y++++D R A ++ +++ MG V Y+ ++ CK E + A+ + M
Sbjct: 571 TYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYM 630
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
+S G P+ Y L L ++ A + E+ GV + +
Sbjct: 631 VSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVLSKS 674
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 117/264 (44%), Gaps = 35/264 (13%)
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M P VVTYT ++ C ++ + EA +L EM +G PN+VT+NVI++ +C+ G+
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDG------------------------------- 259
+D+A +L+ + G +P+ Y T++ G
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297
Query: 260 ----FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
FC G V RA ++ M GCT +I+IN CK ++ A M G
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
PD + Y T+ L + E A +L EM R + T+ TFI LC+ I +A+
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417
Query: 376 ELFRTLRILKCELDIRAYNCLIDG 399
+L + C + I YN L+ G
Sbjct: 418 KLIELMPEYGCSVGIVTYNALVHG 441
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%)
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M+ +G QP+VVT+ V+++ +CK+ EA +LD M G PN YN +++G C GR
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
V+ AKE+ + S G + SY+ ++ G C + + L+ EM+ K P+ V ++
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L VERA ++ +M + G +T I+ +CK + +A + + +
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357
Query: 386 CELDIRAYNCLIDGL 400
C D +Y ++ GL
Sbjct: 358 CNPDTISYTTVLRGL 372
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 59/128 (46%)
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G T + + +M GC +V +Y++L+ CK+ A+++ EM +KG P
Sbjct: 161 GASATAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTP 220
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
++V YN + + +V+ A ++ + + G D +Y T + GLC + LF
Sbjct: 221 NIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLF 280
Query: 379 RTLRILKC 386
+ KC
Sbjct: 281 AEMVDKKC 288
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 127/398 (31%), Positives = 209/398 (52%), Gaps = 18/398 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N L L K+++ + L + + S G PD TYN +++ C+MG+VS +
Sbjct: 82 AYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSM 141
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG--CEPNVFTYNTLINGLYRTG 136
++P+ V + L+ L E ++ EA LF + + P++ TYNTLI+G R
Sbjct: 142 PSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVE 201
Query: 137 HTIVALNLFEE-MASGNGEFGV-----------EGFVDKAKELFLQMKDENINPDVVTYT 184
T A+ LF++ +A G V + +D+A+E+F +M D P+ TY+
Sbjct: 202 KTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYS 261
Query: 185 SVIRGFCYANDWNEAKCLLI--EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
V+ G C N A+CL + EM ++ P+V+ N ++D LCK K+D+A ++L+ M
Sbjct: 262 IVLSGHCRVG--NMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMS 319
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+IG P+ YN L+DG C T V++A ELF +M GC + SYS+++NG CK ++
Sbjct: 320 KIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVH 379
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ M+ + + PDVV +N L L + +++ A L D M V D T T +
Sbjct: 380 DARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLM 439
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GLC++ EAV LF+ + D+ +N ++ GL
Sbjct: 440 HGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGL 477
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 189/372 (50%), Gaps = 14/372 (3%)
Query: 43 LNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 102
+ G PD+ TY+ +I+ CK G+V+ ++ + P+ T+T ++ LC +
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE-------- 154
+ EA LF K+ GC N YN LINGL + + A L EEMAS E
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 155 ----FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL--IEMMD 208
G V +AK+ F M +PDVV Y ++ EA L ++M D
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
+ V P+++T+N ++D C+ K DEA +L +I G P+ YN+++ G ++
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
A+E+F M GC +YSI+++G+C+ + L LY EM K PDV++ N +
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300
Query: 329 VLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
+L + +V+ A K+ +EM + G D TY +DGLCK + + +A ELF T+ C
Sbjct: 301 MLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 360
Query: 389 DIRAYNCLIDGL 400
DI +Y+ +++GL
Sbjct: 361 DIVSYSVVLNGL 372
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/400 (30%), Positives = 199/400 (49%), Gaps = 14/400 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ + L K L + + + G+ PD+ TY I+++ C+ G+V +
Sbjct: 8 PDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADEL 67
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ + N V + +LI GLC + I A L ++ G EP+ TYNT+++GL R
Sbjct: 68 FHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCR 127
Query: 135 TGHTIVALNLFEEMASG---------NGEFGV---EGFVDKAKELF--LQMKDENINPDV 180
G A F+ M S NG EG V +A LF + M D + PD+
Sbjct: 128 MGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDL 187
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+TY ++I GFC +EA L +++ +G P+ VT+N I+ L + MDEA +
Sbjct: 188 ITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKK 247
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M+ G PN Y+ ++ G C G + R EL+ M + V + +I+ CK K+
Sbjct: 248 MVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKK 307
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
++ A + EM G PDVV YN L L + + V++A +LF M +G A D +Y
Sbjct: 308 VDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSV 367
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++GLCK + + +A LF + K D+ +N L+DGL
Sbjct: 368 VLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGL 407
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/430 (31%), Positives = 202/430 (46%), Gaps = 52/430 (12%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLN--STGLFPDLYTYNILINC 61
FD M + R P V ++N L L K LFK ++ + PDL TYN LI+
Sbjct: 138 FDSMPS-RGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDG 196
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
FC++ + + ++ + P+ VT+ S++ GL +S + EA +F K+ GC PN
Sbjct: 197 FCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPN 256
Query: 122 VFTYNTLINGLYRTGHTIVALNLF-----------------------------------E 146
TY+ +++G R G+ L L+ E
Sbjct: 257 GATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLE 316
Query: 147 EMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
EM+ V VDKA ELF M D PD+V+Y+ V+ G C N
Sbjct: 317 EMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTN 376
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
++A+ L M+++ + P+VVTFN++MD LCK GK+DEA LLD+M + V P+
Sbjct: 377 KVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCT 436
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML-S 313
TLM G C R + A LF M G V ++I++ G C+ ++ AL + M+ S
Sbjct: 437 TLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKS 496
Query: 314 KG-IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
G PDVV Y TL L E +V++A F +M G A D Y T ++GL K +
Sbjct: 497 DGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHI 556
Query: 373 EAVELFRTLR 382
+A L + ++
Sbjct: 557 QADRLTQAMK 566
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 114/251 (45%), Gaps = 14/251 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++NIL L K D LF + G PD+ +Y++++N CK +V V+
Sbjct: 325 PDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVL 384
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R++ P+ VTF L+ GLC ++ EA L + P+ T TL++GL R
Sbjct: 385 FDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCR 444
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM--KDENINPDV 180
T A+ LF+ M V EG + +A F M D +PDV
Sbjct: 445 DKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDV 504
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTYT+++ A ++A +M G P+ V +N +M+ L K G+ +A RL
Sbjct: 505 VTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQA 564
Query: 241 MIQIGVRPNAF 251
M + G + F
Sbjct: 565 MKEKGFLSDCF 575
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 3/148 (2%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M P V ++ G L ++K D + LF+ + G D+ +NI++
Sbjct: 419 LLDVMSEHNVLPDGVTCTTLMHG-LCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGL 477
Query: 63 CKMGRVSHGFVVLGRILRSC--FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C+ G+++ + +++S F+P+ VT+T+L+ L R+ +A F ++ GC P
Sbjct: 478 CREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAP 537
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEM 148
+ YNTL+NGL + G I A L + M
Sbjct: 538 DYVAYNTLMNGLRKQGRHIQADRLTQAM 565
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 200/400 (50%), Gaps = 15/400 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N + + + H+ +F+++ S GL PD T++ ++ CK GR +
Sbjct: 300 PDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEI 359
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ P+ V+++ L+ G E R + LF + G N N LI+ +
Sbjct: 360 FQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAK 419
Query: 135 TGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDVV 181
G A+ +F EM G G F G + A E F QM I P+
Sbjct: 420 RGMMDEAMLVFTEM-QGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTA 478
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDL 240
Y S+I GFC D +AK + EMM +G+ +PN+V F+ I+ LC G++ +A + +L
Sbjct: 479 VYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNL 538
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+I IG RP +N+L+DG+CL G++ +A + +M S+G V + + L++GYCK+ +
Sbjct: 539 VIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGK 598
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
I+ L L+ EML K +KP V YN + L + A K+F EM G A D TY+
Sbjct: 599 IDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKI 658
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ GLC+N EA+ LF L + C+ DI N +I+ L
Sbjct: 659 LLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINAL 698
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 186/386 (48%), Gaps = 15/386 (3%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R +P V ++ IL C + + D + RL GL + C C R
Sbjct: 118 RVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDE 177
Query: 71 GF-VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG--CEPNVFTYNT 127
V+L R+ P+A+++ ++IK LC +SR EA + ++ G C P+V ++NT
Sbjct: 178 AVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNT 237
Query: 128 LINGLYRTGHTIVALNLFEEMAS-------GNGEFGVEGF-----VDKAKELFLQMKDEN 175
+I+G ++ G A NLF EM G V+ +DKA+ + QM D+
Sbjct: 238 VIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKG 297
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+ PD VTY ++I G+ + W E+ + +M +G+ P+ VTF+ M LCK+G+ +A
Sbjct: 298 VEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAE 357
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+ M G P+ Y+ L+ G+ GR LF SM G +ILI+ +
Sbjct: 358 EIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAH 417
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
K ++ A+ ++ EM +G++P+VV Y+TL + ++ A + F +M G+ +T
Sbjct: 418 AKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNT 477
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTL 381
Y + I G C + +V+A E +
Sbjct: 478 AVYHSLIHGFCMHGDLVKAKEFISEM 503
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 193/408 (47%), Gaps = 14/408 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF YM + P + S++IL A + + +LF + G+ + + NILI+
Sbjct: 359 IFQYM-TTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAH 417
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K G + +V + PN VT+++LI C R+ +A F+++ G EPN
Sbjct: 418 AKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNT 477
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN-------------GEFGVEGFVDKAKELFL 169
Y++LI+G G + A EM S +EG V A+++F
Sbjct: 478 AVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFN 537
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+ P +VT+ S+I G+C +A +L M+ G++P+VVT N ++ CK+G
Sbjct: 538 LVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSG 597
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+D+ L M+ V+P YN ++DG GR + AK++F M G + +Y
Sbjct: 598 KIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYK 657
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
IL+ G C+N + A++L+ ++ + K D+ I NT+ L+++ + E A LF +
Sbjct: 658 ILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTS 717
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
G+ + TY I L K + EA +F ++ C R N +I
Sbjct: 718 GLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDII 765
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 171/391 (43%), Gaps = 59/391 (15%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS---------- 69
NIL AK D + +F + G+ P++ TY+ LI+ FC+MGR++
Sbjct: 410 INILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMI 469
Query: 70 ---------------HGFVVLGRILRS-----------CFTPNAVTFTSLIKGLCAESRI 103
HGF + G ++++ PN V F+S+I LC E R+
Sbjct: 470 SIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRV 529
Query: 104 MEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDK 163
M+A +F + G P + T+N+LI+G G A + + M S G+E
Sbjct: 530 MDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVS----VGIE----- 580
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
PDVVT +++ G+C + ++ L EM+ + V+P VT+N+++D
Sbjct: 581 --------------PDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLD 626
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
L + G+ A ++ MI G + Y L+ G C + A LF + +M C
Sbjct: 627 GLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKF 686
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
+ + +IN K + E A L+ + + G+ P+V Y + L + VE A +F
Sbjct: 687 DITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMF 746
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
M++ G A + I L + IV+A
Sbjct: 747 SSMEKSGCAPSSRLLNDIIRMLLQKGDIVKA 777
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 109/263 (41%), Gaps = 12/263 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +FN L + + + S G+ PD+ T N L++ +CK G++ G ++
Sbjct: 546 PTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLIL 605
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+L P VT+ ++ GL R A +F ++ G ++ TY L+ GL R
Sbjct: 606 FREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCR 665
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
T A+ LF ++ + + +F + ++A +LF + + P+V T
Sbjct: 666 NDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVST 725
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +IR EA + M G P+ N I+ L + G + +A + +
Sbjct: 726 YGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVD 785
Query: 243 QIGVRPNAFVYNTLMDGFCLTGR 265
+ A + LM F G+
Sbjct: 786 GTIISLEASTTSLLMSLFSSKGK 808
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 137/396 (34%), Positives = 194/396 (48%), Gaps = 18/396 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ L L K K + L ++ S G PD+YTY +I+ C R+ L +
Sbjct: 13 TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
TPN VT+T LI GLC R+ EA AL +K+R C P TYN+LI+GL +
Sbjct: 73 ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKAERA 131
Query: 139 IVALNLFEEMA-SG------NGEFGVEGFV-----DKAKELFLQMKDENINPDVVTYTSV 186
A +L EEM SG + GF D A +F Q+ PDVVTY+ +
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191
Query: 187 IRGFCYANDWNEAKCLLIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
I G C EA L M+ G PN VT+N ++ C+ GKMDEA LL+ M + G
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG 251
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
P+ Y TLM+GFC R++ A +L M G T V +++ L++G C+ + A+
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAV 311
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK-LFDEMQRDGVAADTWTYRTFIDG 364
+ GEM K P V YNT+ +Q+E A K + +EM + ++ I G
Sbjct: 312 HILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD---CPPNVVSFNIMIRG 368
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LCK + EA+EL R +C D+ Y +IDGL
Sbjct: 369 LCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 204/400 (51%), Gaps = 17/400 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L + + + L P++ TY +LI+ CK GRV +
Sbjct: 44 PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVAL 103
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ + C P AVT+ SLI GLC R EA L ++ GC P++FTY TLI G +
Sbjct: 104 LSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCK 162
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM-KDENINPDVV 181
+ + AL +FE++ + V EG + +A +LF +M K + P+ V
Sbjct: 163 SKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTV 222
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY S+I GFC +EA LL M + G P+VVT+ +M+ CK ++D+A LL+ M
Sbjct: 223 TYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQM 282
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G+ P+ + +LMDG C R++ A + M C+ TV++Y+ +++GYC+ ++
Sbjct: 283 TRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQL 342
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A E + P+VV +N + L ++++ A +L +E +R D Y T
Sbjct: 343 EEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTV 400
Query: 362 IDGLCKNSYIVEAVELFRT-LRILKCELDIRAYNCLIDGL 400
IDGLC+ + EA ++R L C + Y+ LI GL
Sbjct: 401 IDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGL 440
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 125/387 (32%), Positives = 191/387 (49%), Gaps = 31/387 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L L K + L + + +G PD++TY LI FCK + V
Sbjct: 113 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 172
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPNVFTYNTLINGLY 133
+++ F P+ VT++ LI GLC E R+ EA LF ++ G C PN TYN+LI+G
Sbjct: 173 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 232
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
R G A+NL E MA + +PDVVTYT+++ GFC
Sbjct: 233 RMGKMDEAMNLLERMA-----------------------ETGSSPDVVTYTTLMNGFCKL 269
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
++A LL +M +G+ P+VVTF +MD LC+ ++ +A +L M + P + Y
Sbjct: 270 ARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTY 329
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
NT++DG+C ++ A++ +E M C V S++I+I G CK A+ L E
Sbjct: 330 NTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARR 387
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM-QRDGVAADTWTYRTFIDGLCKNSYIV 372
+ PDVV+Y T+ L +V+ A +++ +M + G ++ TY T I GLC +
Sbjct: 388 RRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLD 447
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDG 399
A R C +I YN LID
Sbjct: 448 RA----RGYIEKGCVPNIGTYNLLIDA 470
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 183/350 (52%), Gaps = 25/350 (7%)
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 110
D TY LI CK+ R+ + LG+++ F P+ T+T++I LC E+R+ EA
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQ 170
++ PNV TY LI+GL + G VD+A L +
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGR-----------------------VDEAVALLSK 106
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M+ + + P VTY S+I G C A +EA LL EM+ G P++ T+ ++ CK+ K
Sbjct: 107 MRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 165
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMGCTHTVFSYS 289
D+A R+ + ++ G RP+ Y+ L+DG C GR+ A +LF M +S C +Y+
Sbjct: 166 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 225
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
LI+G+C+ +++ A++L M G PDVV Y TL ++ +++ A+ L ++M R
Sbjct: 226 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 285
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G+ D T+ + +DGLC+ + + +AV + +R C + YN ++DG
Sbjct: 286 GLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDG 335
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 161/314 (51%), Gaps = 30/314 (9%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ P ++N L + D ++L +R+ TG PD+ TY L+N F
Sbjct: 207 LFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGF 266
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK+ R+ + +L ++ R TP+ VTFTSL+ GLC E+R+ +A + ++R C P V
Sbjct: 267 CKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTV 326
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+TYNT+++G R N EE A++ L+ D P+VV+
Sbjct: 327 YTYNTILDGYCRA-------NQLEE----------------ARKFMLEEMD--CPPNVVS 361
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ +IRG C N +EA L+ E + P+VV + ++D LC+ K+DEA R+ M+
Sbjct: 362 FNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKML 421
Query: 243 -QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G PN+ Y+TL+ G C G ++RA+ GC + +Y++LI+ + K
Sbjct: 422 EEPGCLPNSITYSTLITGLCNAGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKANRD 477
Query: 302 EGALSLYGEMLSKG 315
E A L +M+ +G
Sbjct: 478 EDARELLDDMVQRG 491
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 168/338 (49%), Gaps = 31/338 (9%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG-LFPDLYTYNILINCFCKMGRVSHGFV 73
P V +++ L L K + LF R+ +G P+ TYN LI+ FC+MG++
Sbjct: 183 PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN 242
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L R+ + +P+ VT+T+L+ G C +R+ +A L ++ G P+V T+ +L++GL
Sbjct: 243 LLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLC 302
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
R E + A + +M+ ++ +P V TY +++ G+C A
Sbjct: 303 R-----------------------ENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRA 339
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
N EA+ ++E MD PNVV+FN+++ LCK + EA L++ + P+ +Y
Sbjct: 340 NQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMY 397
Query: 254 NTLMDGFCLTGRVNRAKELFVSM-ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
T++DG C +V+ A ++ M E GC +YS LI G C G L +
Sbjct: 398 TTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCN----AGMLDRARGYI 453
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
KG P++ YN L + ++ E A +L D+M + G
Sbjct: 454 EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 147/283 (51%), Gaps = 25/283 (8%)
Query: 118 CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENIN 177
C + TY +LI GL + AL +M S +GF +
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVS-------KGF----------------H 43
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
PDV TYT+VI C N +EA+ L EM ++ + PNVVT+ V++D LCK G++DEA L
Sbjct: 44 PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVAL 103
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
L M + V P A YN+L+ G C R + A +L M GC +F+Y+ LI G+CK
Sbjct: 104 LSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCK 162
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA-ADTW 356
+K+ + AL ++ +++++G +PDVV Y+ L L + +++ A LF M + G +T
Sbjct: 163 SKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTV 222
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
TY + I G C+ + EA+ L + D+ Y L++G
Sbjct: 223 TYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNG 265
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
C+ +Y+ LI G CK K +E AL G+M+SKG PDV Y + L +++ A
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
K +EM + + TY IDGLCK + EAV L +R KC YN LI GL
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLISGL 125
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 122/376 (32%), Positives = 195/376 (51%), Gaps = 13/376 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ + LAKNK ++L +++ + G P + TYN L+N CKMGR+ +L +I
Sbjct: 36 TYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 95
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ + TP+ VT+TSLI GL + R EA LF ++ G + Y LI GL + G
Sbjct: 96 VDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKI 155
Query: 139 IVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSV 186
A ++++ M S V G + A +F M+ + P+ V Y+++
Sbjct: 156 PQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSAL 215
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G C A + A +L +M P+ +T+N+++D LCK+G + A D M++ G
Sbjct: 216 IHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGC 275
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+P+ + YN L+ GFC G + A +F M S C+ V +Y LI+G CK +++ A
Sbjct: 276 KPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASL 335
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
Y M +G PD +Y++L L + ++E LFDEM+R GV A++ T I LC
Sbjct: 336 YYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFHLC 394
Query: 367 KNSYIVEAVELFRTLR 382
K + + EAV LF +R
Sbjct: 395 KANRVDEAVSLFNAIR 410
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 118/382 (30%), Positives = 186/382 (48%), Gaps = 23/382 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+F+IL L K SL + + G D++TY +++ K ++ ++ +I
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ TP T+ +L+ GLC R+ EA L K+ GC P+V TY +LI+GL + +
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
A LF+EMAS + D V YT++IRG A +
Sbjct: 121 FEAYKLFKEMAS-----------------------RGLALDTVCYTALIRGLLQAGKIPQ 157
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A + M QG P+VVT + ++D LCK G++ A R+ M G+ PN VY+ L+
Sbjct: 158 ASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIH 217
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G C +++ A E+ M+ CT +Y+ILI+G CK+ ++ A + + EML G KP
Sbjct: 218 GLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKP 277
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
DV YN L + + A +FD+M + + TY T I GLCK + +A +
Sbjct: 278 DVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYY 337
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
+ ++ C D Y+ L+DGL
Sbjct: 338 QHMKERGCPPDSFVYSSLVDGL 359
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 145/297 (48%), Gaps = 25/297 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + + + L K + +FK + + GL P+ Y+ LI+ CK ++ +
Sbjct: 172 PDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM 231
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ ++ TP+ +T+ LI GLC + A A F ++ GC+P+V+TYN LI+G +
Sbjct: 232 LAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCK 291
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G+T A +F++M+S +P+VVTY ++I G C
Sbjct: 292 AGNTDAACGVFDDMSS-----------------------SRCSPNVVTYGTLISGLCKRR 328
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+A M ++G P+ ++ ++D LCK+GK++ L D M + GV N+
Sbjct: 329 QLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRT 387
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
L+ C RV+ A LF ++ G H ++Y+ +I+ K+ ++ ++Y EM
Sbjct: 388 RLIFHLCKANRVDEAVSLFNAIRKEGMPHP-YAYNSIISALIKSGKVNEGQAVYQEM 443
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 118/274 (43%), Gaps = 26/274 (9%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF M R P ++ L L K + D L + ++ PD TYNILI+
Sbjct: 196 IFKSM-EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGL 254
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G V+ +L + P+ T+ LI G C A +F + C PNV
Sbjct: 255 CKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNV 314
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TY TLI+GL + + KA + MK+ PD
Sbjct: 315 VTYGTLISGLCKRRQ-----------------------LTKASLYYQHMKERGCPPDSFV 351
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+S++ G C + E C+L + M++ N T ++ LCK ++DEA L + +
Sbjct: 352 YSSLVDGLCKSGKL-EGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIR 410
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
+ G+ P+ + YN+++ +G+VN + ++ M
Sbjct: 411 KEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEM 443
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 112/242 (46%), Gaps = 27/242 (11%)
Query: 2 CIFDYMLNMRPS--PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILI 59
C + + M+ + P ++NIL L K+ + F + G PD+YTYNILI
Sbjct: 227 CALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILI 286
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 119
+ FCK G V + S +PN VT+ +LI GLC ++ +A+ + ++ GC
Sbjct: 287 SGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCP 346
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPD 179
P+ F Y++L++GL ++G LF+EM GV +
Sbjct: 347 PDSFVYSSLVDGLCKSGKLEGGCMLFDEMERS----GV--------------------AN 382
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
T T +I C AN +EA L + +G+ P+ +N I+ L K+GK++E +
Sbjct: 383 SQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQ 441
Query: 240 LM 241
M
Sbjct: 442 EM 443
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 120/380 (31%), Positives = 196/380 (51%), Gaps = 24/380 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+N L LA+ D + ++ + + P++YTYN ++N +CK+G V + +I+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+ P+ T+TSLI G C + A +F ++ + GC N Y LI+GL
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGL------- 298
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
V +D+A +LF++MKD+ P V TYT +I+ C + +EA
Sbjct: 299 ----------------CVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEA 342
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
L+ EM + G++PN+ T+ V++D LC K ++A LL M++ G+ PN YN L++G
Sbjct: 343 LNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALING 402
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
+C G + A ++ MES + +Y+ LI GYCK+ + A+ + +ML + + PD
Sbjct: 403 YCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPD 461
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
VV YN+L + A++L M G+ D WTY + ID LCK+ + EA +LF
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFD 521
Query: 380 TLRILKCELDIRAYNCLIDG 399
+L ++ Y LIDG
Sbjct: 522 SLEQKGVNPNVVMYTALIDG 541
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 187/385 (48%), Gaps = 24/385 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ +L L ++ L+L K + TG+ P+++TY +LI+ C + +
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
LG++L PN +T+ +LI G C I +A + + PN TYN LI G +
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ V KA + +M + + PDVVTY S+I G C +
Sbjct: 441 SN------------------------VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSG 476
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+++ A LL M D+G+ P+ T+ ++D LCK+ +++EA L D + Q GV PN +Y
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYT 536
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DG+C G+V+ A + M S C +++ LI+G C + +++ A L +M+
Sbjct: 537 ALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G++P V L L + + A+ F +M G D TY TFI C+ +++A
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
++ +R D+ Y+ LI G
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLIKG 681
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 175/368 (47%), Gaps = 13/368 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++ +L L ++ L ++ GL P++ TYN LIN +CK G + V
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + +PN T+ LIKG C +S + +A + K+ P+V TYN+LI+G R
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474
Query: 135 TGHTIVALNLFEEM------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+G+ A L M S V++A +LF ++ + +NP+VV
Sbjct: 475 SGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVM 534
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT++I G+C A +EA +L +M+ + PN +TFN ++ LC +GK+ EA+ L + M+
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV 594
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+IG++P L+ G + A F M S G +Y+ I YC+ +
Sbjct: 595 KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLL 654
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A + +M G+ PD+ Y++L ++ Q AF + M+ G T+ + I
Sbjct: 655 DAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Query: 363 DGLCKNSY 370
L + Y
Sbjct: 715 KHLLEMKY 722
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 201/424 (47%), Gaps = 31/424 (7%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++N R P ++ + L K+K + LF L G+ P++ Y LI+ +CK G
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+V ++L ++L PN++TF +LI GLCA+ ++ EA L K+ G +P V T
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDT 606
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDE 174
LI+ L + G A + F++M S + + EG + A+++ +M++
Sbjct: 607 ILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMREN 666
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD----------- 223
++PD+ TY+S+I+G+ N A +L M D G +P+ TF ++
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQK 726
Query: 224 ----ELCKNGKM---DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
ELC M D LL+ M++ V PNA Y L+ G C G + A+++F M
Sbjct: 727 GSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHM 786
Query: 277 E-SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
+ + G + + ++ L++ CK K+ A + +M+ G P + L L++ +
Sbjct: 787 QRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGE 846
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
ER +F + + G D ++ IDG+ K + ELF + C+ + Y+
Sbjct: 847 KERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSL 906
Query: 396 LIDG 399
LI+G
Sbjct: 907 LIEG 910
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 165/348 (47%), Gaps = 33/348 (9%)
Query: 52 LYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 111
+Y+Y L+ G V F + +++SC ++V + LC + E L
Sbjct: 123 VYSYASLLTLLINNGYVGVVFKIRLLMIKSC---DSVGDALYVLDLCRKMNKDERFELKY 179
Query: 112 KLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQM 171
KL + GC YNTL+N L R G VD+ K+++++M
Sbjct: 180 KL-IIGC------YNTLLNSLARFG-----------------------LVDEMKQVYMEM 209
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
++ + P++ TY ++ G+C + EA + ++++ G+ P+ T+ ++ C+ +
Sbjct: 210 LEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDL 269
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
D A ++ + M G R N Y L+ G C+ R++ A +LFV M+ C TV +Y++L
Sbjct: 270 DSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVL 329
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I C ++ AL+L EM GIKP++ Y L L + E+A +L +M G+
Sbjct: 330 IKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 389
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ TY I+G CK I +AV++ + K + R YN LI G
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG 437
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 91/183 (49%)
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
+N +++ L + G +DE ++ M++ V PN + YN +++G+C G V A + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
G F+Y+ LI GYC+ K+++ A ++ EM KG + + V Y L L +++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
A LF +M+ D TY I LC + EA+ L + + + +I Y LI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 398 DGL 400
D L
Sbjct: 366 DSL 368
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 53/129 (41%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD+M P FN L C K K ++ + + G P L + +LI
Sbjct: 782 VFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGL 841
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K G G V +L+ + + + + +I G+ + + LF + GC+ +
Sbjct: 842 YKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSS 901
Query: 123 FTYNTLING 131
TY+ LI G
Sbjct: 902 QTYSLLIEG 910
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 204/412 (49%), Gaps = 16/412 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ D ML R P V ++ +L + K+ + +++ + + G P++ TYN++IN
Sbjct: 161 LALLDDMLQ-RGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIIN 219
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C+ GRV +L R+ F P+ V++T+++KGLCA R + LF ++ C P
Sbjct: 220 GMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVP 279
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELF 168
N T++ L+ R G A+ + ++M+ +G VD A +
Sbjct: 280 NEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFL 339
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
M NPD ++YT+V+RG C A W AK LL EM+ + PN VTFN + LC+
Sbjct: 340 NNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQK 399
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G +++A +L++LM + G YN L+ GFC+ GRV+ A ELF ++ C +Y
Sbjct: 400 GLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELF---NNLPCEPNTITY 456
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ L+ G C + ++ A L M+ K + V +N L + VE A +L ++M
Sbjct: 457 TTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMME 516
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G + T+ T +DG+ K+ EA+EL L LD Y+ ++D L
Sbjct: 517 HGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVL 568
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 188/388 (48%), Gaps = 29/388 (7%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
+P V ++N L + D L + S + PD YTY +I C GRV
Sbjct: 105 APVDVFAYNTLVAGYCRYGRLDAARRL---IASMPVPPDAYTYTPIIRGLCDRGRVGDAL 161
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+L +L+ P+ VT+T L++ +C S EA + ++R GC PN+ TYN +ING+
Sbjct: 162 ALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGM 221
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
R EG VD AKE+ ++ PD+V+YT+V++G C
Sbjct: 222 CR-----------------------EGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCA 258
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
A W++ K L EM+D+ PN VTF++++ C+ G ++ A ++L M Q G PN +
Sbjct: 259 ARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTL 318
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
N +++ C GRV+ A + +M GC SY+ ++ G C+ E A L EM+
Sbjct: 319 CNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMV 378
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
K P+ V +NT +L + +E+A KL + M G + TY + G C +
Sbjct: 379 RKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVD 438
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
A+ELF L CE + Y L+ GL
Sbjct: 439 SALELFNN---LPCEPNTITYTTLLTGL 463
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 184/399 (46%), Gaps = 17/399 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S+ + L + +D V LF + P+ T+++L+ FC+ G V V
Sbjct: 244 PDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQV 303
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ + TPN +I +C + R+ +A + ++GC P+ +Y T++ GL R
Sbjct: 304 LQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCR 363
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
G A L EM N +G +++A +L M + + +VT
Sbjct: 364 AGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVT 423
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y +++ GFC + A +E+ + +PN +T+ ++ LC ++D A+ LL M
Sbjct: 424 YNALVHGFCVQGRVDSA----LELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAGM 479
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
IQ NA +N L+ FC G V A EL M GCT + +++ L++G K+
Sbjct: 480 IQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNS 539
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E AL L ++SKG+ D + Y+++ VL + E A ++ +Q G+ Y
Sbjct: 540 EEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKI 599
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ LCK +A++ F + C + Y LI+GL
Sbjct: 600 LFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGL 638
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 182/384 (47%), Gaps = 16/384 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M++ + P V +F++L + + + + ++++ G P+ NI+IN
Sbjct: 268 LFAEMVDKKCVPNEV-TFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAI 326
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK GRV + L + P+ +++T++++GLC R A L ++ C PN
Sbjct: 327 CKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNE 386
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG------------VEGFVDKAKELFLQ 170
T+NT I L + G A+ L E M G V+G VD A ELF
Sbjct: 387 VTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNN 446
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ E P+ +TYT+++ G C+A + A LL M+ + N VTFNV++ C+ G
Sbjct: 447 LPCE---PNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGF 503
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
++EA L++ M++ G PN +NTL+DG A EL + S G + +YS
Sbjct: 504 VEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSS 563
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+++ + E A+ + + G++P V +YN + L + + ++A F M +G
Sbjct: 564 VVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNG 623
Query: 351 VAADTWTYRTFIDGLCKNSYIVEA 374
+ TY I+GL + EA
Sbjct: 624 CMPNESTYIILIEGLAHEGLLKEA 647
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 146/317 (46%), Gaps = 26/317 (8%)
Query: 84 TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALN 143
P+ T LI+ LC R +AA + G +VF YNTL+ G R G
Sbjct: 71 APDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGR------ 124
Query: 144 LFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
+D A+ L M + PD TYT +IRG C +A LL
Sbjct: 125 -----------------LDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALL 164
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
+M+ +G QP+VVT+ V+++ +CK+ EA +LD M G PN YN +++G C
Sbjct: 165 DDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCRE 224
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
GRV+ AKE+ + S G + SY+ ++ G C + + L+ EM+ K P+ V +
Sbjct: 225 GRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTF 284
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
+ L VERA ++ +M + G +T I+ +CK + +A + + +
Sbjct: 285 DMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGM 344
Query: 384 LKCELDIRAYNCLIDGL 400
C D +Y ++ GL
Sbjct: 345 YGCNPDTISYTTVLRGL 361
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 150/344 (43%), Gaps = 9/344 (2%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
NI+ + K D + G PD +Y ++ C+ GR H +L ++R
Sbjct: 320 NIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVR 379
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
PN VTF + I LC + I +A L + +GC + TYN L++G G
Sbjct: 380 KNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDS 439
Query: 141 ALNLFEEMASGNGEFGVEGFV---------DKAKELFLQMKDENINPDVVTYTSVIRGFC 191
AL LF + + D A EL M ++ + VT+ ++ FC
Sbjct: 440 ALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFC 499
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
EA L+ +MM+ G PN++TFN ++D + K+ +EA LL ++ GV +
Sbjct: 500 QKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTI 559
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
Y++++D R A ++ +++ MG V Y+ ++ CK E + A+ + M
Sbjct: 560 TYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYM 619
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
+S G P+ Y L L ++ A + E+ GV + +
Sbjct: 620 VSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVLSKS 663
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 3/214 (1%)
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
+R +D EA L+ +G P+V ++ LC+ G+ +A+R+L G
Sbjct: 46 LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+ F YNTL+ G+C GR++ A+ L SM ++Y+ +I G C + AL+
Sbjct: 106 PVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALA 162
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L +ML +G +P VV Y L + + A + DEM+ G + TY I+G+C
Sbjct: 163 LLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMC 222
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + +A E+ L + DI +Y ++ GL
Sbjct: 223 REGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGL 256
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/416 (31%), Positives = 213/416 (51%), Gaps = 20/416 (4%)
Query: 4 FDYM----LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILI 59
+DY+ +NM SP + SFN++ L K + D + +F+ + PD YTY L+
Sbjct: 171 YDYVVNSNMNMNISPNGL-SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLM 229
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 119
+ CK R+ ++L + +P+ V + LI GLC + + L + + GC
Sbjct: 230 DGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCV 289
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASG-----NGEFG--VEGFVDK-----AKEL 167
PN TYNTLI+GL G A++L E M S + +G + G V + A L
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRL 349
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
M++ + + Y+ +I G EA L +M ++G +PN+V ++V++D LC+
Sbjct: 350 LSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCR 409
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
GK +EA +L+ MI G PNA+ Y++LM GF TG A +++ M+ GC+ F
Sbjct: 410 EGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFC 469
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM- 346
YS+LI+G C ++ A+ ++ +ML+ GIKPD V Y+++ L I ++ A KL+ EM
Sbjct: 470 YSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529
Query: 347 --QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ D TY +DGLC I AV+L ++ C+ D+ N ++ L
Sbjct: 530 CQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTL 585
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 190/410 (46%), Gaps = 37/410 (9%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M + SP PV +N+L L K V L + G P+ TYN LI+
Sbjct: 244 LLDEMQSEGCSPSPVI-YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C G++ +L R++ S PN VT+ +LI GL + R +A L + + G N
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
Y+ LI+GL++ G A++L+ +MA + + EG ++AKE+ +
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNR 422
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M P+ TY+S+++GF EA + EM G N ++V++D LC G+
Sbjct: 423 MIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGR 482
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM---ESMGCTHTVFS 287
+ EA + M+ IG++P+ Y++++ G C G ++ A +L+ M E V +
Sbjct: 483 VKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVT 542
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT---------------------L 326
Y+IL++G C K+I A+ L ML +G PDV+ NT L
Sbjct: 543 YNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEEL 602
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
V L + +V A + + M +A T T+ + +CK I A++
Sbjct: 603 VVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 175/387 (45%), Gaps = 28/387 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGR 77
SF ++F K D + LF R+ + + ++N ++N G G
Sbjct: 114 SFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDY 173
Query: 78 ILRSCF----TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
++ S +PN ++F +IK LC + A +F + C P+ +TY TL++GL
Sbjct: 174 VVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLC 233
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ E +D+A L +M+ E +P V Y +I G C
Sbjct: 234 K-----------------------EERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKK 270
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
D L+ M +G PN VT+N ++ LC GK+D+A LL+ M+ PN Y
Sbjct: 271 GDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTY 330
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
TL++G R A L SME G YS+LI+G K + E A+SL+ +M
Sbjct: 331 GTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAE 390
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG KP++V+Y+ L L + A ++ + M G + +TY + + G K E
Sbjct: 391 KGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEE 450
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
AV++++ + C + Y+ LIDGL
Sbjct: 451 AVQVWKEMDKTGCSRNKFCYSVLIDGL 477
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 189/362 (52%), Gaps = 12/362 (3%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
PD++ YN LIN FCKM R+ VL R+ F+P+ VT+ +I LC+ ++ A +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------ 157
+L C+P V TY LI G AL L +EM S + +
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 158 EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
EG VD+A E+ ++ + PDV++Y ++R W E + L+ +M + PNVVT
Sbjct: 276 EGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
+++++ LC++GK++EA LL LM + G+ P+A+ Y+ L+ FC GR++ A E +M
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
S GC + +Y+ ++ CKN + + AL ++G++ G P+ YNT+F L+
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
RA + EM +G+ D TY + I LC+ + EA EL +R + + YN ++
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515
Query: 398 DG 399
G
Sbjct: 516 LG 517
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 179/391 (45%), Gaps = 13/391 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M + SP V ++NI+ G L D L + +L S P + TY ILI
Sbjct: 180 VLDRMRSKDFSPDTV-TYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEAT 238
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
G V ++ +L P+ T+ ++I+G+C E + A + L + G EP+V
Sbjct: 239 MLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDV 298
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
+YN L+ L G L +M S + V +G +++A L
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 358
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
MK++ + PD +Y +I FC + A L M+ G P++V +N ++ LCKNGK
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
D+A + + ++G PN+ YNT+ +G RA + + M S G +Y+
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNS 478
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+I+ C+ ++ A L +M S P VV YN + + + H++E A + + M +G
Sbjct: 479 MISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+ TY I+G+ Y EA+EL L
Sbjct: 539 CRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 164/350 (46%), Gaps = 13/350 (3%)
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ G +L ++R + P+ + T LIKG I +A + L FG +P+V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
F YN LING + A + + M S + G G +D A ++ Q
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ +N P V+TYT +I +EA L+ EM+ +G++P++ T+N I+ +CK G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+D A ++ + G P+ YN L+ G+ ++L M S C V +YSI
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI C++ +IE A++L M KG+ PD Y+ L +++ A + + M DG
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D Y T + LCKN +A+E+F L + C + +YN + L
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 135/271 (49%), Gaps = 13/271 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++IL L ++ + ++L K + GL PD Y+Y+ LI FC+ GR+
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+ V + +++ LC + +A +F KL GC PN +YNT+ + L+
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
+G I AL++ EM S + EG VD+A EL + M+ +P VVT
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVT 510
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y V+ GFC A+ +A +L M+ G +PN T+ V+++ + G EA L + ++
Sbjct: 511 YNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
+I + + + L F L + R+ + F
Sbjct: 571 RIDA-ISEYSFKRLHRTFPLLNVLQRSSQTF 600
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 189/362 (52%), Gaps = 12/362 (3%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
PD++ YN LIN FCKM R+ VL R+ F+P+ VT+ +I LC+ ++ A +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------ 157
+L C+P V TY LI G AL L +EM S + +
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 158 EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
EG VD+A E+ ++ + PDV++Y ++R W E + L+ +M + PNVVT
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
+++++ LC++GK++EA LL LM + G+ P+A+ Y+ L+ FC GR++ A E +M
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
S GC + +Y+ ++ CKN + + AL ++G++ G P+ YNT+F L+
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
RA + EM +G+ D TY + I LC+ + EA EL +R + + YN ++
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515
Query: 398 DG 399
G
Sbjct: 516 LG 517
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 180/391 (46%), Gaps = 13/391 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M + SP V ++NI+ G L D L + +L S P + TY ILI
Sbjct: 180 VLDRMRSKDFSPDTV-TYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEAT 238
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
G V ++ +L P+ T+ ++I+G+C E + A + L + GCEP+V
Sbjct: 239 MLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDV 298
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
+YN L+ L G L +M S + V +G +++A L
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 358
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
MK++ + PD +Y +I FC + A L M+ G P++V +N ++ LCKNGK
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
D+A + + ++G PN+ YNT+ +G RA + + M S G +Y+
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNS 478
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+I+ C+ ++ A L +M S P VV YN + + + H++E A + + M +G
Sbjct: 479 MISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+ TY I+G+ Y EA+EL L
Sbjct: 539 CRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 164/350 (46%), Gaps = 13/350 (3%)
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ G +L ++R + P+ + T LIKG I +A + L FG +P+V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
F YN LING + A + + M S + G G +D A ++ Q
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ +N P V+TYT +I +EA L+ EM+ +G++P++ T+N I+ +CK G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+D A ++ + G P+ YN L+ G+ ++L M S C V +YSI
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI C++ +IE A++L M KG+ PD Y+ L +++ A + + M DG
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D Y T + LCKN +A+E+F L + C + +YN + L
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 135/271 (49%), Gaps = 13/271 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++IL L ++ + ++L K + GL PD Y+Y+ LI FC+ GR+
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+ V + +++ LC + +A +F KL GC PN +YNT+ + L+
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
+G I AL++ EM S + EG VD+A EL + M+ +P VVT
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVT 510
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y V+ GFC A+ +A +L M+ G +PN T+ V+++ + G EA L + ++
Sbjct: 511 YNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
+I + + + L F L + R+ + F
Sbjct: 571 RIDA-ISEYSFKRLHRTFPLLNVLQRSSQTF 600
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/381 (31%), Positives = 202/381 (53%), Gaps = 14/381 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+FN L L K + + ++ K+++ FP L+TY L++ F K+GR+ + L
Sbjct: 256 TFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEA 315
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ F P+AVT+TS+I GLC R+ E F ++R G EP+ TY LI+G +
Sbjct: 316 VERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMI 375
Query: 139 IVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSV 186
A ++ +M G V +A FL M++ VVTY+++
Sbjct: 376 PKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSAL 435
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
+ GFC + + A L M+D+G +PN+V++N+I+ LC+ GK+ +A + ++Q +
Sbjct: 436 MDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRL 495
Query: 247 RPNAFVYNTLMDGFCLT-GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
P+ + +N+ + G C V ELF SM S G + + SYSIL++G C+ +E L
Sbjct: 496 CPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTL 555
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
++ EM+S+G+ PDVV++NTL L +V+ A ++F E++R A D W+Y + +D L
Sbjct: 556 EIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDAL 614
Query: 366 CKNSYIVEAVELFRTLRILKC 386
+ + EA L +++ C
Sbjct: 615 SRCERMEEARLLSFHMKLQGC 635
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/445 (27%), Positives = 196/445 (44%), Gaps = 52/445 (11%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
+L+ P P + +F ++ L + K D S+ +R G PD TYN+ I+ CK
Sbjct: 31 LLDEMPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAE 90
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL------------- 113
RV F +L ++ P VT+T+L+ GL R+ EA A+ ++
Sbjct: 91 RVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYT 150
Query: 114 ----------------RVF------GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG 151
R+F GC P+ F Y LI+GL + G AL +M
Sbjct: 151 VVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVEN 210
Query: 152 NGEFGVE----------------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
GVE G ++ A F ++ D++++ T+ ++ C A
Sbjct: 211 GCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDEL-DDSLDLTHFTFNPLVAALCKAER 269
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
EA + +M ++ P + T+ ++D K G++DEA L ++ G P+A Y +
Sbjct: 270 TEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTS 329
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
++DG C GRV E F M + G +Y+ LI+G+ K K I A +Y +ML G
Sbjct: 330 IIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSG 389
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
V YN + L + +V A+ F M+ G A TY +DG C + AV
Sbjct: 390 TVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAV 449
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
ELFR + CE ++ +YN +I GL
Sbjct: 450 ELFRRMLDRGCEPNLVSYNIIIRGL 474
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 204/437 (46%), Gaps = 51/437 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ L L K D +++ +++ G P L TY ++I+ K GRV +
Sbjct: 109 PTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRI 168
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC----EPNVFTYNTLIN 130
+L + P+A +T+LI GL ++ EA ++ GC EP+V +N +I
Sbjct: 169 FVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIR 228
Query: 131 GLYRTGHTIVALNLFEEM----------------ASGNGEFG------------------ 156
L +G+ AL F+E+ A E
Sbjct: 229 QLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPT 288
Query: 157 -------VEGFVD--KAKELFLQMKD---ENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
V+GF+ + E LQ+K+ PD VTYTS+I G C E
Sbjct: 289 LFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFH 348
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
EM ++G +P+ VT+ ++D K + +A R+ M+Q G + YN ++DG C G
Sbjct: 349 EMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAG 408
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
RV A F++ME GC TV +YS L++G+C + A+ L+ ML +G +P++V YN
Sbjct: 409 RVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYN 468
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN-SYIVEAVELFRTLRI 383
+ L ++ +A+ F+++ + + D +T+ +F+ GLC+ + + VELF ++
Sbjct: 469 IIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVS 528
Query: 384 LKCELDIRAYNCLIDGL 400
++ +Y+ L+DG+
Sbjct: 529 QGTSPNLHSYSILMDGI 545
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 181/403 (44%), Gaps = 18/403 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLN----STGLFPDLYTYNILINCFCKMGRVSH 70
P + L LAK D L ++ + G+ PD+ +N++I C G +
Sbjct: 179 PDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLED 238
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
L TF L+ LC R EA A K+ C P +FTY +L++
Sbjct: 239 ALAYFDE-LDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVD 297
Query: 131 GLYRTGHTIVAL-NLFEEMASGNGEFGVE-----------GFVDKAKELFLQMKDENINP 178
G + G AL L E + G V G V++ E F +M++ P
Sbjct: 298 GFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEP 357
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D VTY ++I GF A +A + +M+ G + VT+N+I+D LCK G++ EA
Sbjct: 358 DAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATF 417
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
M + G Y+ LMDGFC G V+ A ELF M GC + SY+I+I G C+
Sbjct: 418 LAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRA 477
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE-IHQVERAFKLFDEMQRDGVAADTWT 357
++ A + ++L + + PDV +N+ L + + V +LF+ M G + + +
Sbjct: 478 GKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHS 537
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Y +DG+C+ + +E+F + D+ +N LI L
Sbjct: 538 YSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWL 580
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 139/288 (48%), Gaps = 16/288 (5%)
Query: 126 NTLINGLYRTGHTIVALNLFEEMASG----------NGEFGVEGFVDKAKELFLQMKDEN 175
L+NGL +TG A+ L +EM NG E +D+A + +
Sbjct: 13 TALLNGLCKTGQLDRAMLLLDEMPCSPDMVAFTVVING-LCREKRLDEAFSVLERAVRAG 71
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
PD VTY I G C A ++A LL +M ++ P VT+ ++D L K G++DEA
Sbjct: 72 CEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAM 131
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+L+ M++ G P Y ++DG GRV A+ +FV M GC F Y+ LI+G
Sbjct: 132 AILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGL 191
Query: 296 CKNKEIEGALSLYGEML----SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
K +++ AL +M+ ++G++PDVVI+N + L +E A FDE+ D +
Sbjct: 192 AKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELD-DSL 250
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+T+ + LCK EA+ + + +C + Y L+DG
Sbjct: 251 DLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDG 298
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 3/182 (1%)
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
+++ LCK G++D A LLD ++ P+ + +++G C R++ A +
Sbjct: 13 TALLNGLCKTGQLDRAMLLLD---EMPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVR 69
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
GC +Y++ I+G CK + ++ A L +M K P V Y L L + +++
Sbjct: 70 AGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDE 129
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A + ++M G + TY IDGL K + EA +F + C D Y LI
Sbjct: 130 AMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIS 189
Query: 399 GL 400
GL
Sbjct: 190 GL 191
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 3/149 (2%)
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
V L++G C TG+++RA L ++ M C+ + +++++ING C+ K ++ A S+
Sbjct: 11 VCTALLNGLCKTGQLDRAMLL---LDEMPCSPDMVAFTVVINGLCREKRLDEAFSVLERA 67
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
+ G +PD V YN L + +V+ AF+L +M T TY +DGL K +
Sbjct: 68 VRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRL 127
Query: 372 VEAVELFRTLRILKCELDIRAYNCLIDGL 400
EA+ + + ++ Y +IDGL
Sbjct: 128 DEAMAILEQMVEKGNSPTLKTYTVVIDGL 156
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 91/213 (42%), Gaps = 26/213 (12%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F ML+ R P + S+NI+ L + F++L L PD+YT+N ++
Sbjct: 451 LFRRMLD-RGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGL 509
Query: 63 C-KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
C ++ V G + ++ +PN +++ L+ G+C + +F ++ G P+
Sbjct: 510 CQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPD 569
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
V +NTLI L + G VD+A E+F +++ + PD
Sbjct: 570 VVVFNTLIRWLC-----------------------IAGRVDEALEVFRELERRSA-PDAW 605
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
+Y S++ EA+ L M QG P
Sbjct: 606 SYWSLLDALSRCERMEEARLLSFHMKLQGCAPR 638
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/396 (29%), Positives = 201/396 (50%), Gaps = 12/396 (3%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP S+N++ L ++ L +F + G+ P+ TYN +I+ K G + GF
Sbjct: 191 PPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFR 250
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ ++L PN VT+ L+ GLC R+ E AL ++ P+ FTY+ L +GL
Sbjct: 251 LRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLT 310
Query: 134 RTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVV 181
RTG + L+LF E G +G V KAK++F + + P V
Sbjct: 311 RTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTV 370
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y ++I G+C D A C+ +M + ++P+ +T+N +++ LCK + +A L+ M
Sbjct: 371 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM 430
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ GV P+ +NTL+D + G++ + + M+ G V S+ ++ +CKN +I
Sbjct: 431 EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKI 490
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A+++ +M+ K + P+ +YN++ E E+A L ++M+ GV+A TY
Sbjct: 491 PEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLL 550
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ GLC++S I EA EL TLR D+ +YN +I
Sbjct: 551 LKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTII 586
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 188/402 (46%), Gaps = 15/402 (3%)
Query: 13 SP-PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
SP P + S N+L L + V + F L + G PD + +N ++ G +
Sbjct: 117 SPLPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVA 176
Query: 72 FVVLGRILRS--CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
+L R+ RS P+A ++ +I GL + +A +F ++ G PN TYNT+I
Sbjct: 177 LAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMI 236
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENIN 177
+G + G L ++M + V G +D+ + L +M ++
Sbjct: 237 DGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSML 296
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
PD TY+ + G + L E + +GV T +++++ LCK+GK+ +A ++
Sbjct: 297 PDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQV 356
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
++++ G+ P +YNTL++G+C + A +F M+S +Y+ LING CK
Sbjct: 357 FEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCK 416
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+ + A L EM G+ P V +NTL Q+E+ F + +MQ+ G+ +D +
Sbjct: 417 LEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVIS 476
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + + CKN I EAV + + + + YN +ID
Sbjct: 477 FGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDA 518
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 166/387 (42%), Gaps = 47/387 (12%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ILF L + T+LSLF G+ YT +IL+N CK G+V+ V
Sbjct: 297 PDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQV 356
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ + P V + +LI G C + A +F +++ P+ TYN LINGL +
Sbjct: 357 FEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCK 416
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
A +L EM + +G G ++K + M+ + I DV++
Sbjct: 417 LEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVIS 476
Query: 183 YTSVIRGFCY-----------------------------------ANDWNEAKCLLIEMM 207
+ SV++ FC + D +A L+ +M
Sbjct: 477 FGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMK 536
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+ GV ++VT+N+++ LC++ ++DEA L+ + G+RP+ YNT++ C G +
Sbjct: 537 NSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTD 596
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
+A EL M G T+ + L++ + LY +ML K ++P IY +
Sbjct: 597 KALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMV 656
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAAD 354
+ L EM G+A D
Sbjct: 657 DAYVRCENDSKVASLKKEMSEKGIAFD 683
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 201/385 (52%), Gaps = 23/385 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FN L L K LF ++ G+ P+L+T+NI I CK G + +
Sbjct: 293 PDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRL 352
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
LG + R P+ VT+ ++I GLC +SR++EA K+ G EPN FTYN++I+G +
Sbjct: 353 LGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCK 412
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G + A + ++ +GF PD TY S++ GFC
Sbjct: 413 KGMVVDANRILKDAV-------FKGF----------------KPDEFTYCSLVNGFCQDG 449
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
D ++A + + + +G++P+++ +N ++ LC+ G + A +L++ M + G +P+ + YN
Sbjct: 450 DPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYN 509
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+++G C G ++ A L + GC +F+Y+ L++GYC+ +++ A+ L M S+
Sbjct: 510 LIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQ 569
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+ PDV+ YNTL L + + E ++F M G A + TY T I+ LC + + EA
Sbjct: 570 GMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEA 629
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
V+L ++ D+ ++ LI G
Sbjct: 630 VDLLGEMKSKGLTPDVVSFGTLITG 654
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 204/411 (49%), Gaps = 16/411 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD +L R P + +FNI L K D + L ++ GL PD+ TYN +I
Sbjct: 317 LFDKVLK-RGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGL 375
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ RV L +++ F PN T+ S+I G C + +++A + G +P+
Sbjct: 376 CRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDE 435
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFL 169
FTY +L+NG + G A+ +F++ G G +G + A +L
Sbjct: 436 FTYCSLVNGFCQDGDPDQAMAVFKD-GLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMN 494
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M ++ PD+ TY +I G C ++A L+ + + +G P++ T+N ++D C+
Sbjct: 495 EMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQL 554
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+D A L++ M G+ P+ YNTL++G C T + E+F +M GC + +Y+
Sbjct: 555 KLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYN 614
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
+I C +K++ A+ L GEM SKG+ PDVV + TL ++ ++ A+ LF M++
Sbjct: 615 TIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQ 674
Query: 350 -GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
V+ T TY I + + A+ LF ++ C+ D Y LIDG
Sbjct: 675 YDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDG 725
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 129/456 (28%), Positives = 203/456 (44%), Gaps = 93/456 (20%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR------- 67
P V S+N + L + +++ ++ R+ + D+YTY I I FC+ GR
Sbjct: 188 PSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRL 247
Query: 68 ------------------VSHGFVVLG----------RILRSCFTPNAVTFTSLIKGLCA 99
V GF G +L C P+ TF L+ LC
Sbjct: 248 LRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCK 307
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEG 159
+ ++E+ LF K+ G PN+FT+N I GL + EG
Sbjct: 308 KGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCK-----------------------EG 344
Query: 160 FVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 219
+D+A L + E + PDVVTY +VI G C + EA+ L +M++ G +PN T+N
Sbjct: 345 SLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYN 404
Query: 220 VIMDELCKNGKMDEASRLL----------------------------DLMIQI------- 244
I+D CK G + +A+R+L D + +
Sbjct: 405 SIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGK 464
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G+RP+ VYNTL+ G C G + A +L M GC +++Y+++ING CK + A
Sbjct: 465 GLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDA 524
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L G+ ++KG PD+ YNTL +++ A +L + M G+ D TY T ++G
Sbjct: 525 NHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNG 584
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LCK + E +E+F+ + C +I YN +I+ L
Sbjct: 585 LCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESL 620
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 182/372 (48%), Gaps = 12/372 (3%)
Query: 40 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
F+R++ P +Y+YN ++N + G + V R+ + T+T IK C
Sbjct: 178 FERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCR 237
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM---------AS 150
R A L + V GC N Y T++ G Y G A LF+EM +
Sbjct: 238 TGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTT 297
Query: 151 GNG---EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
N +GFV +++ LF ++ + P++ T+ I+G C + A LL +
Sbjct: 298 FNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVS 357
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+G++P+VVT+N ++ LC+ ++ EA L M+ G PN F YN+++DG+C G V
Sbjct: 358 REGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVV 417
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A + G F+Y L+NG+C++ + + A++++ + L KG++P +++YNTL
Sbjct: 418 DANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLI 477
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
L + + A +L +EM G D WTY I+GLCK + +A L C
Sbjct: 478 KGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCI 537
Query: 388 LDIRAYNCLIDG 399
DI YN L+DG
Sbjct: 538 PDIFTYNTLVDG 549
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 167/342 (48%), Gaps = 13/342 (3%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G PD +TY L+N FC+ G V L P+ + + +LIKGLC + I+ A
Sbjct: 430 GFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPA 489
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG-------EFGVEG 159
L ++ GC+P+++TYN +INGL + G A +L + + V+G
Sbjct: 490 LQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDG 549
Query: 160 F-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
+ +D A EL +M + + PDV+TY +++ G C E + M ++G PN
Sbjct: 550 YCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPN 609
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
++T+N I++ LC + K++EA LL M G+ P+ + TL+ GFC G ++ A LF
Sbjct: 610 IITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFR 669
Query: 275 SMESM-GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
ME +HT +Y+I+I+ + + ++ AL L+ EM G PD Y L +
Sbjct: 670 GMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKT 729
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
V + +K E G T+ ++ LC + EAV
Sbjct: 730 GNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAV 771
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 156/342 (45%), Gaps = 24/342 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +N L L + L L + G PD++TYN++IN CKMG +S +
Sbjct: 468 PSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHL 527
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+G + P+ T+ +L+ G C + ++ A L ++ G P+V TYNTL+NGL +
Sbjct: 528 IGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCK 587
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
T + ++ E+F M ++ P+++TY ++I C +
Sbjct: 588 TAKS-----------------------EEVMEIFKAMTEKGCAPNIITYNTIIESLCNSK 624
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM-IQIGVRPNAFVY 253
NEA LL EM +G+ P+VV+F ++ CK G +D A L M Q V Y
Sbjct: 625 KVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATY 684
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N ++ F + A LF M+ GC ++Y +LI+G+CK + E +
Sbjct: 685 NIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIE 744
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
KG P + + + L H+V+ A + M + + DT
Sbjct: 745 KGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDT 786
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 142/296 (47%), Gaps = 13/296 (4%)
Query: 117 GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE-------------FGVEGFVDK 163
G + +FTY +++ L G NL EM S +G +G + +
Sbjct: 114 GFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQE 173
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
A + F +M N +P V +Y +++ +N+A + + M D+ V+ +V T+ + +
Sbjct: 174 AVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIK 233
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
C+ G+ A RLL M +G NA Y T++ GF G +RA+ELF M
Sbjct: 234 SFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCP 293
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
V +++ L++ CK + + L+ ++L +G+ P++ +N L + ++RA +L
Sbjct: 294 DVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLL 353
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ R+G+ D TY T I GLC+ S +VEA E + E + YN +IDG
Sbjct: 354 GCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDG 409
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 201/399 (50%), Gaps = 25/399 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
++ +M+ P V S++IL LAK D L + + G P + Y+ L+
Sbjct: 67 VYQHMVESGYKPDNV-SYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRAL 125
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K RV H + ++R P+ + F LI GLC ++ +A+ F ++ GC+PNV
Sbjct: 126 AKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNV 185
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
YN L++GL +G +++A LF +MK + +PDVVT
Sbjct: 186 PVYNVLLHGLCSSGQ-----------------------LEQANTLFAEMKSHSCSPDVVT 222
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++ C A E L M G PNV+TF+ ++ LC+ G++++A + M+
Sbjct: 223 YNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSML 282
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G +PN + Y TL+ G C +V +A+ELF M +Y+ LI GYCK ++
Sbjct: 283 EAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMD 342
Query: 303 GALSLYGEML-SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A LY EM G++P +V +NTL ++ ++ RA +L EM G+AAD+ TYR
Sbjct: 343 EAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRIL 402
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I GL + + + EA+E+++ +R K LD + + GL
Sbjct: 403 IAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGL 441
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 188/397 (47%), Gaps = 13/397 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +++ + L K + + + + + G PD++ +N ++ F + + V
Sbjct: 10 VFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQ 69
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ S + P+ V++ LI GL ++ E+ + +++ + G P++ Y++L+ L +
Sbjct: 70 HMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKAR 129
Query: 137 HTIVALNLFEEMASGNGE----------FGV--EGFVDKAKELFLQMKDENINPDVVTYT 184
A +LF+EM G G+ G V A E F QM P+V Y
Sbjct: 130 RVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYN 189
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
++ G C + +A L EM P+VVT+N ++D +CK +++E +L + M
Sbjct: 190 VLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAA 249
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G PN ++TL+ G C TG + +A E+F SM GC ++Y+ LI+G C+ +++ A
Sbjct: 250 GYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQA 309
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD-GVAADTWTYRTFID 363
L+ +M I PD V YN+L + ++ A KL+ EM G+ T+ T ID
Sbjct: 310 RELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLID 369
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G CK + A EL + D Y LI GL
Sbjct: 370 GFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGL 406
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 182/386 (47%), Gaps = 13/386 (3%)
Query: 10 MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS 69
MR P + +++ L LAK + D SLF + G PD + LI C+ G+V
Sbjct: 108 MRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVK 167
Query: 70 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
++ + PN + L+ GLC+ ++ +A LF +++ C P+V TYNTL+
Sbjct: 168 DASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLL 227
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENIN 177
+ + + LFE M + V G ++KA E+F M +
Sbjct: 228 DAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCK 287
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P+ TYT++I G C A +A+ L +M + P+ V +N ++ CK G MDEA +L
Sbjct: 288 PNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKL 347
Query: 238 LDLMIQ-IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
M G++P +NTL+DGFC G++ RA EL M + G +Y ILI G
Sbjct: 348 YREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLS 407
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
+ +++ AL +Y +M K D V + L + +++A+ +F+ ++ G +
Sbjct: 408 RATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPE 467
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLR 382
T+R + L K + +A +L +
Sbjct: 468 TFRILSESLIKLGRVEDAQKLMEPAK 493
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 176/362 (48%), Gaps = 13/362 (3%)
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 110
+++TY+ +I K + + VL ++ + P+ F +++G + + +A ++
Sbjct: 9 NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF---------- 160
+ G +P+ +Y+ LI+GL + G +L + EM ++ +
Sbjct: 69 QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKA 128
Query: 161 --VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
VD A LF +M +PD + + +I G C A +A +M G QPNV +
Sbjct: 129 RRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVY 188
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
NV++ LC +G++++A+ L M P+ YNTL+D C RV +LF +M +
Sbjct: 189 NVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRA 248
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
G V ++S LI+G C+ E+E AL ++G ML G KP+ Y TL L +V +
Sbjct: 249 AGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQ 308
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR-ILKCELDIRAYNCLI 397
A +LF++M + + D Y + I G CK + EA +L+R + + I +N LI
Sbjct: 309 ARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLI 368
Query: 398 DG 399
DG
Sbjct: 369 DG 370
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 162/315 (51%), Gaps = 23/315 (7%)
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
N T++S+IK L E++ E+ + ++ GC P+VF +N ++ G R+ +
Sbjct: 9 NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN-------- 60
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
++KA+E++ M + PD V+Y +I G +E+ +L E
Sbjct: 61 ---------------MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSE 105
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M+ +G P++ ++ ++ L K ++D AS L D MI+ G P+ ++ L+ G C G+
Sbjct: 106 MVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGK 165
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
V A E F M GC V Y++L++G C + ++E A +L+ EM S PDVV YNT
Sbjct: 166 VKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNT 225
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L + + +VE KLF+ M+ G + T+ T I GLC+ + +A+E+F ++
Sbjct: 226 LLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAG 285
Query: 386 CELDIRAYNCLIDGL 400
C+ + Y LI GL
Sbjct: 286 CKPNKYTYTTLISGL 300
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 159/341 (46%), Gaps = 24/341 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N+L L + + +LF + S PD+ TYN L++ CK RV G +
Sbjct: 183 PNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKL 242
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + + PN +TF++LI GLC + +A +F + GC+PN +TY TLI+GL R
Sbjct: 243 FEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCR 302
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
I +A+ELF +M I PD V Y S+I G+C
Sbjct: 303 AEKVI-----------------------QARELFEKMTQACIPPDAVAYNSLIAGYCKRG 339
Query: 195 DWNEAKCLLIEMM-DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+EA+ L EM G+QP +VTFN ++D CK GK+ A+ L+ M G+ ++ Y
Sbjct: 340 SMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTY 399
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
L+ G +++ A E++ M S + G CK I+ A +++
Sbjct: 400 RILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRK 459
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
G P+ + L L ++ +VE A KL + + + A
Sbjct: 460 SGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDITAQ 500
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 126/399 (31%), Positives = 206/399 (51%), Gaps = 17/399 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S+N++ L ++F + S G+ P +YT+ +++ FC + V +
Sbjct: 163 PTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSL 222
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + PN++ + LI L +R+ EA L ++ + GCEP+V T+N +I+GL +
Sbjct: 223 LRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCK 282
Query: 135 TGHTIVALNLFEEMASGN--GEFGVEGF----------VDKAKELFLQMKDENINPDVVT 182
G A L + M + + ++G+ VD+A+ + ++ NP+ V
Sbjct: 283 AGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP----NPNTVL 338
Query: 183 YTSVIRGFCYANDWNEAKCLLIE-MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y ++I G+ + + EAK LL + M+ G +P+ TFN+++D LCK G + A LD M
Sbjct: 339 YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEM 398
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++ G PN Y L+DGFC G A ++ SM + G + Y+ LI CK+ +I
Sbjct: 399 VKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKI 458
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ AL +YGEM SKG KPD+ +N+L L + ++E A L+ +M +GV A+T TY T
Sbjct: 459 QDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTL 518
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I + I +A +L +R C LD YN LI L
Sbjct: 519 IHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKAL 557
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/354 (31%), Positives = 176/354 (49%), Gaps = 28/354 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +L L++N + + L + + G PD+ T+N +I+ CK GR+ +
Sbjct: 233 PNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKL 292
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R+L FT +A+ L+ GLC ++ EA A+ +K+ PN YNTLING
Sbjct: 293 HDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP----NPNTVLYNTLING--- 345
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQ-MKDENINPDVVTYTSVIRGFCYA 193
+ V G ++AK+L + M PD T+ +I G C
Sbjct: 346 --------------------YVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKK 385
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
A L EM+ +G +PNV+T+ +++D CK G +EAS++++ M G+ N Y
Sbjct: 386 GYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGY 445
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N L+ C G++ A +++ M S GC +++++ LI G CKN ++E AL LY +ML
Sbjct: 446 NCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLL 505
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
+G+ + V YNTL + +++A KL EM+ G D TY I LCK
Sbjct: 506 EGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCK 559
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 170/372 (45%), Gaps = 23/372 (6%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
ML+ P+P V ++ G + + + L+K + G PD +T+NI+I+ CK G
Sbjct: 327 MLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKG 386
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ L +++ F PN +T+T LI G C + EA+ + + G N YN
Sbjct: 387 YLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYN 446
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
LI L + G AL ++ EM+S + PD+ T+ S+
Sbjct: 447 CLIGALCKDGKIQDALQMYGEMSS-----------------------KGCKPDIYTFNSL 483
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G C + EA L +M+ +GV N VT+N ++ + + +A +L+ M G
Sbjct: 484 IYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGC 543
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+ YN L+ C TG + L M ++ S +ILIN +C+ ++ AL
Sbjct: 544 PLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQ 603
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
+M+ +G+ PD+V YN+L L ++ + + A LF+ +Q G+ D TY T I C
Sbjct: 604 FLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYC 663
Query: 367 KNSYIVEAVELF 378
+A +L
Sbjct: 664 YEGLFNDACQLL 675
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 157/331 (47%), Gaps = 26/331 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FNI+ L K + + L + G P++ TY ILI+ FCK G V
Sbjct: 370 PDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKV 429
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + + N V + LI LC + +I +A ++ ++ GC+P+++T+N+LI GL +
Sbjct: 430 VNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCK 489
Query: 135 TGHTIVALNLFEEMASGNGEFGVEG-------------------FVDKAKELFLQMKDEN 175
AL L+ +M +EG + +A +L +M+
Sbjct: 490 NDKMEEALGLYRDML-------LEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRG 542
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
D +TY +I+ C + L+ +M + + P++ + N++++ C+ GK+++A
Sbjct: 543 CPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDAL 602
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+ L MIQ G+ P+ YN+L++G C GR A LF +++ G +Y+ LI+ Y
Sbjct: 603 QFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRY 662
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
C A L + +S G P+ + ++ L
Sbjct: 663 CYEGLFNDACQLLFKGVSNGFIPNEITWSIL 693
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 138/296 (46%), Gaps = 12/296 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ IL K H++ + +++ GL + YN LI CK G++ +
Sbjct: 405 PNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQM 464
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
G + P+ TF SLI GLC ++ EA L+ + + G N TYNTLI+ R
Sbjct: 465 YGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLR 524
Query: 135 TGHTIVALNLFEEMA---------SGNGEFGV---EGFVDKAKELFLQMKDENINPDVVT 182
A L EM + NG G +K L QM E I P + +
Sbjct: 525 LELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINS 584
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+I FC N+A L +M+ +G+ P++VT+N +++ LCK G+ EA L + +
Sbjct: 585 CNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQ 644
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
G+ P+A YNTL+ +C G N A +L S G ++SILIN + KN
Sbjct: 645 AKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKN 700
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 154/332 (46%), Gaps = 17/332 (5%)
Query: 82 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVA 141
CF P ++ +++ L A + A +F + G P V+T+ ++ A
Sbjct: 160 CFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSA 219
Query: 142 LNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRG 189
+L +M V++A +L +M PDV T+ VI G
Sbjct: 220 CSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHG 279
Query: 190 FCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
C A +EA L M+ + + + +M LC+ GK+DEA +L + PN
Sbjct: 280 LCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKI----PNPN 335
Query: 250 AFVYNTLMDGFCLTGRVNRAKE-LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
+YNTL++G+ ++GR AK+ L+ +M G F+++I+I+G CK + AL
Sbjct: 336 TVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFL 395
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
EM+ KG +P+V+ Y L + E A K+ + M G++ +T Y I LCK+
Sbjct: 396 DEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKD 455
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I +A++++ + C+ DI +N LI GL
Sbjct: 456 GKIQDALQMYGEMSSKGCKPDIYTFNSLIYGL 487
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 113/240 (47%), Gaps = 20/240 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +FN L L KN + L L++ + G+ + TYN LI+ F ++ + +
Sbjct: 475 PDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKL 534
Query: 75 LGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE--PNVFTYNTLING 131
+G + R C N +T+ LIK LC + L ++ FG E P++ + N LIN
Sbjct: 535 VGEMRFRGCPLDN-ITYNGLIKALCKTGATEKCLGLIEQM--FGEEIFPSINSCNILINS 591
Query: 132 LYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINP 178
RTG AL +M NG + G +A LF ++ + I+P
Sbjct: 592 FCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKM-GRFQEALNLFNGLQAKGIHP 650
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D VTY ++I +CY +N+A LL + + G PN +T++++++ KN E +L
Sbjct: 651 DAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQFTIL 710
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 106/250 (42%), Gaps = 12/250 (4%)
Query: 153 GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV- 211
G G +DK L QMKDE + ++R + A +A LL++M GV
Sbjct: 105 GNVGEFKMIDK---LLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMW--GVY 159
Query: 212 --QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
+P ++NV+++ L A + M+ G+ P + + +M FC+ V+ A
Sbjct: 160 CFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSA 219
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
L M GC Y +LI+ +N + A+ L EM G +PDV +N +
Sbjct: 220 CSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHG 279
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
L + ++ A KL D M AD + GLC+ + EA + + L
Sbjct: 280 LCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVL- 338
Query: 390 IRAYNCLIDG 399
YN LI+G
Sbjct: 339 ---YNTLING 345
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 23/197 (11%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P ++N L L K + L L +++ +FP + + NILIN FC+ G+
Sbjct: 538 MRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGK 597
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V+ L +++ TP+ VT+ SLI GLC R EA LF L+ G P+ TYNT
Sbjct: 598 VNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNT 657
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
LI+ + EG + A +L + P+ +T++ +I
Sbjct: 658 LIS-----------------------RYCYEGLFNDACQLLFKGVSNGFIPNEITWSILI 694
Query: 188 RGFCYANDWNEAKCLLI 204
F N +E +L+
Sbjct: 695 NYFVKNNSDSEQFTILM 711
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 129/391 (32%), Positives = 196/391 (50%), Gaps = 12/391 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S+N L LAK+ D V + + G P+ YTY L+ C+ R V +
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+PN +++ LI GLC ++ EAA L ++ G +PNV TY +L++GL + G
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 139 IVALNLFEEMA-SGNGEFGV------EGFVDK-----AKELFLQMKDENINPDVVTYTSV 186
A++LF M G GV +GF K A LF +M ++ P V TY S+
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
+ GF ++ + L +M+ QG PN+ TFN ++D CK G M EA RL M +G
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+ YNTLM G C G+ + A+ L M G + SY+ILI+GY K+ ++ A+
Sbjct: 259 PPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIK 318
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L+ E+ G++PD Y+T+ L +V AF +F +M +G A D + GLC
Sbjct: 319 LFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLC 378
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ + E+ ELF+ + +C I YN L+
Sbjct: 379 RGERLTESCELFQAMVKFECVPLIPEYNLLM 409
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 171/347 (49%), Gaps = 23/347 (6%)
Query: 54 TYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL 113
+YN L+ K GR H + +L + PN T+ L++ LC R EA ++F +
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 114 RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKD 173
GC PNVF+Y+ LI GL R VD+A EL +M D
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQK-----------------------VDEAAELLNEMID 115
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
P+VVTY S++ G C EA L M+ +G P+ V +NV++D K G M E
Sbjct: 116 GGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGE 175
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A RL + M++ G P F YN+L+ GF G R + LF M GC +F+++ L++
Sbjct: 176 AYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLD 235
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
G+CK ++ A L+ EM S G PDVV YNTL + + A +L EM R GV
Sbjct: 236 GFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGP 295
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D +Y IDG K+ + A++LF + E D +Y+ +ID L
Sbjct: 296 DIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCL 342
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 193/409 (47%), Gaps = 48/409 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ L L + + ++ S+F+ + + G P++++Y+ILI C+ +V +
Sbjct: 50 PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAEL 109
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ PN VT+ SL+ GLC ++ EA LF+++ GC P+ YN LI+G +
Sbjct: 110 LNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSK 169
Query: 135 TGHTIVALNLFEEMA------------------SGNGEFG-------------------- 156
G A LFEEM S GEFG
Sbjct: 170 KGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFT 229
Query: 157 ----VEGFVD-----KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
++GF +A LFL+M+ PDVV+Y +++RG C +EA+ LL EM+
Sbjct: 230 FNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMI 289
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
GV P++V++N+++D K+G +D A +L + + G+ P+AF Y+T++D C G+V
Sbjct: 290 RSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVG 349
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A +F M + G L+ G C+ + + + L+ M+ P + YN L
Sbjct: 350 AAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLM 409
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
L + + + ++F E+ G + D + ++ L + S EA E
Sbjct: 410 YKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL-RRSDDKEAAE 457
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 148/329 (44%), Gaps = 23/329 (6%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP +N+L +K LF+ + G P ++TYN L++ F + G
Sbjct: 151 RGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGR 210
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ +LR PN TF +L+ G C ++EA LF ++R GC P+V +YNTL+
Sbjct: 211 VQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMR 270
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
G+ G +A+ L +M + PD+V+Y +I G+
Sbjct: 271 GMCSKGKP-----------------------HEAQRLLREMIRSGVGPDIVSYNILIDGY 307
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
+ + A L E+ G++P+ +++ I+D LC+ GK+ A + MI G P+A
Sbjct: 308 SKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDA 367
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
V L+ G C R+ + ELF +M C + Y++L+ CK K + ++ E
Sbjct: 368 AVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHE 427
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
+ +G PDV I + L E A
Sbjct: 428 LTERGFSPDVEISKVILETLRRSDDKEAA 456
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%)
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q+ YN L++ +GR + + M GC ++Y L+ C+ + E
Sbjct: 10 QVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFE 69
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A S++ M ++G P+V Y+ L L +V+ A +L +EM G + TY + +
Sbjct: 70 EARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLL 129
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
GLCK + EAV+LF + C D YN LIDG
Sbjct: 130 SGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDG 166
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 136/431 (31%), Positives = 204/431 (47%), Gaps = 38/431 (8%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
+L P P V FN L L + + D LF + +G D+ TYNIL+ CK+
Sbjct: 300 LLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLR 359
Query: 67 RVSHGF--VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPNVF 123
R+ + V L R C +PN VTF++LI+GLC R+ +A ++ ++ V G PN F
Sbjct: 360 RIPEAYRHVELMRRTEGC-SPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRF 418
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGE----------------------------- 154
TY L+ GL + G + FE+M
Sbjct: 419 TYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNT 478
Query: 155 ----FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG 210
G V A L M + ++PDV+T+ SV+ G C +A + +++G
Sbjct: 479 LVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERG 538
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
+PNVVT++ ++D L K KMDEA +LL M+++G R N Y+T++DG GR+ A
Sbjct: 539 CRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAV 598
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
+ M GC +Y+ LI+G+ K + + A+ L EML G P VV Y TL L
Sbjct: 599 VVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGL 658
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL-RILKCELD 389
+ + A ++ D M G A + TY + +DGLCK + EA+ F + R
Sbjct: 659 CRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPH 718
Query: 390 IRAYNCLIDGL 400
+ AY+ LIDGL
Sbjct: 719 VIAYSALIDGL 729
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 124/432 (28%), Positives = 198/432 (45%), Gaps = 46/432 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FN + L K + ++FKR G P++ TY+ LI+ KM ++ +
Sbjct: 506 PDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQL 565
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ N VT+++++ GL R+ +A + ++R GC P+ TYNTLI+G ++
Sbjct: 566 LAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFK 625
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
A+ L EM V G D+A E+ M P+ +T
Sbjct: 626 RQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAIT 685
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMM-DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y+S++ G C A EA +M D+ V P+V+ ++ ++D LCK G++DEA L+ M
Sbjct: 686 YSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERM 745
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
I+ G P+ ++ L++G C GR++ ELF M GC +++Y+ +IN YC E
Sbjct: 746 IRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEF 805
Query: 302 EGALSLYGEMLSKGIKP---------------------------------DVVIYNTLFV 328
A +L EM + GI D + YNTL
Sbjct: 806 SAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLIT 865
Query: 329 VLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
L + E+A +L M DG + D Y T +DGL K A +L + +R
Sbjct: 866 SLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSP 925
Query: 389 DIRAYNCLIDGL 400
D+R Y +I GL
Sbjct: 926 DLRTYTIMISGL 937
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 123/394 (31%), Positives = 188/394 (47%), Gaps = 48/394 (12%)
Query: 52 LYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 111
+ TYN+LIN CK GRV F + ++ F P VT++++I GLC ++ + + L
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 112 KLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG------EFGV-------E 158
++ GC PN TYNTL+N L G A +L E MA+ NG FG+ E
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAA-NGCPPELITFGLIIKGLCKE 119
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
G ++ A + +M D PDV +T ++ C +EA +++ G P+ VT+
Sbjct: 120 GEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTY 179
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
N ++D L K G+++ A +L L+ + P F + +DG G + A E F SM
Sbjct: 180 NTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQ 239
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSL---------------------YGEMLSKGIK 317
G + +Y LI+G CK +++ AL L L + I+
Sbjct: 240 TGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQ 299
Query: 318 --------PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
P+VV +N+L L + +V+ AF+LFD M+ G +AD TY + GLCK
Sbjct: 300 LLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLR 359
Query: 370 YIVEA---VELFRTLRILKCELDIRAYNCLIDGL 400
I EA VEL R R C ++ ++ LI GL
Sbjct: 360 RIPEAYRHVELMR--RTEGCSPNVVTFSTLIQGL 391
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 198/467 (42%), Gaps = 97/467 (20%)
Query: 24 FGCLAKNKHYDTVLS-------------LFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
GC A Y TV+ + +++ G PD TYN LI+ F K R+
Sbjct: 572 LGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLRE 631
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+L +L + F P+ VT+T+L GLC R EA + + GC PN TY+++++
Sbjct: 632 AVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVD 691
Query: 131 GLYRTGHTIVALNLFEEMA---------------------SGNGEFGVE----------- 158
GL + G AL FE+MA +G + E
Sbjct: 692 GLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRI 751
Query: 159 ----------------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
G +D ELF M + D+ Y ++I +C +++ A L
Sbjct: 752 PDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYAL 811
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA--------------------------SR 236
L EM G+ N VT +++ LC N ++DEA SR
Sbjct: 812 LEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASR 871
Query: 237 -------LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
LL M+ G P+A Y T+MDG G A +L M S G + + +Y+
Sbjct: 872 RSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYT 931
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
I+I+G K K++ A + EML K +KPD ++Y++L + +V+ A+KL ++
Sbjct: 932 IMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKL---LRSS 988
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
G+ Y T +D LCKN +A+E+ R ++ CE I + L
Sbjct: 989 GIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSL 1035
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 189/372 (50%), Gaps = 22/372 (5%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P ++N L L SL +R+ + G P+L T+ ++I CK G +
Sbjct: 65 RGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEA 124
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
F V+ ++ F P+ T L+ LC R+ EA F ++ + G P+ TYNT+++
Sbjct: 125 AFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVD 184
Query: 131 GLYRTGHTIVA---LNLFEEMASGNGEF----GVEGF-----VDKAKELFLQMKDENINP 178
GLY+ G A L L E S F V+G + A E F M ++P
Sbjct: 185 GLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSP 244
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
+ VTY ++I G C A + A LL D+ Q + F+ ++ LC+ +++EA +LL
Sbjct: 245 NTVTYDALIDGLCKAGKLDIALGLL---RDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLL 301
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
M + PN +N+LM+G C RV+ A ELF M+ GC+ V +Y+IL+ G CK
Sbjct: 302 KAMPCV---PNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKL 358
Query: 299 KEIEGALSLYGEML--SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM-QRDGVAADT 355
+ I A + E++ ++G P+VV ++TL L +V +A+++++ M +G++ +
Sbjct: 359 RRIPEAYR-HVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNR 417
Query: 356 WTYRTFIDGLCK 367
+TY ++GLCK
Sbjct: 418 FTYAFLLEGLCK 429
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 161/355 (45%), Gaps = 15/355 (4%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ M P V +++ L L K D +R+ G PD+ T++ILIN C
Sbjct: 706 FEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLC 765
Query: 64 KMGRVSHGFVVL-GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
GR+ G + G R C + + ++I C + A AL +++ G N
Sbjct: 766 DAGRIDTGLELFCGMAERGC-KADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNT 824
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASG-NGEFGVEGFV---------DKAKELFLQMK 172
T+ +I L A++ F + E + ++A EL M
Sbjct: 825 VTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMV 884
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 232
+ +PD Y +V+ G A A LL EM +G P++ T+ +++ L K ++
Sbjct: 885 ADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLP 944
Query: 233 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
A + M++ ++P+A VY++L+D FC +V+ A +L + S G T+ YS ++
Sbjct: 945 LACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKL---LRSSGIEPTITMYSTMV 1001
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
+ CKN+ + AL + EM SK +P + I+ +L +V+ A KL +++Q
Sbjct: 1002 DSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 185/365 (50%), Gaps = 12/365 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L +N H L + + G PD++TYNI++NC CK G++ +
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ P+ TF +LI LC +R+ EA L ++ V G P+V+T+N LIN L +
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 403
Query: 135 TGHTIVALNLFEEMASGN---GEFGVEGFVD---------KAKELFLQMKDENINPDVVT 182
G +AL LFEEM + E +D KA +L M+ +T
Sbjct: 404 VGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTIT 463
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G C EA+ + +M QG+ N +TFN ++D LCK+ K+D+A L++ MI
Sbjct: 464 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMI 523
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G++PN YN+++ +C G + +A ++ +M + G V +Y LING CK +
Sbjct: 524 SEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQ 583
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL + M KG++P YN + LF + + A LF EM G D TY+
Sbjct: 584 VALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVF 643
Query: 363 DGLCK 367
GLC+
Sbjct: 644 RGLCR 648
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 122/405 (30%), Positives = 200/405 (49%), Gaps = 12/405 (2%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P V +FN L L + T + + + ++S G+ PD T+ L+ F + G
Sbjct: 172 MGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGS 231
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ V R+L + VT LI G C R+ +A + G EP+ TYNT
Sbjct: 232 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 291
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDEN 175
+NGL + H AL + + M + V G +++AK + QM D
Sbjct: 292 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
PD+ T+ ++I C N EA L ++ +GV P+V TFN++++ LCK G A
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 411
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
RL + M G P+ YNTL+D C G++ +A +L MES GC + +Y+ +I+G
Sbjct: 412 RLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGL 471
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
CK IE A ++ +M +GI + + +NTL L + +++ AF+L ++M +G+ +
Sbjct: 472 CKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNN 531
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY + + CK I +A ++ T+ E+D+ Y LI+GL
Sbjct: 532 ITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 576
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 169/362 (46%), Gaps = 47/362 (12%)
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
+ V + L+ L S++ ++++++ G +P+V T+NTL+ L R A+ +
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 204
Query: 146 EEMAS--------------------GNGEFGVE--------------------------- 158
EEM+S G+ E +
Sbjct: 205 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL 264
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
G V+ A Q + PD +TY + + G C + A ++ M+ +G P+V T+
Sbjct: 265 GRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTY 324
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
N++++ LCKNG+++EA +L+ M+ G P+ +NTL+ C R+ A +L +
Sbjct: 325 NIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 384
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
G + V++++ILIN CK + AL L+ EM + G PD V YNTL L + ++ +
Sbjct: 385 KGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGK 444
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A L +M+ G T TY T IDGLCK I EA E+F + + + +N LID
Sbjct: 445 ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 504
Query: 399 GL 400
GL
Sbjct: 505 GL 506
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 138/292 (47%), Gaps = 10/292 (3%)
Query: 113 LRVFGCEPNVFTYNTLINGLYRTGHTIV--ALNLFEEMASGNGEF--GVEGFVDKAKELF 168
+R G + L+ + R GH + ++ F + G F V+ +++ + LF
Sbjct: 81 IRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLF 140
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
I D V Y ++ + + + EM +G++P+VVTFN +M LC+
Sbjct: 141 ------GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRA 194
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
++ A +L+ M GV P+ + TLM GF G + A + M MGC+ T +
Sbjct: 195 HQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTV 254
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
++LINGYCK +E AL + ++ G +PD + YNT L + V A K+ D M +
Sbjct: 255 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 314
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+G D +TY ++ LCKN + EA + + C DI +N LI L
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 133/293 (45%), Gaps = 13/293 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FNIL L K L LF+ + ++G PD TYN LI+ C +G++ +
Sbjct: 389 PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDL 448
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + + +T+ ++I GLC + RI EA +F ++ + G N T+NTLI+GL +
Sbjct: 449 LKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCK 508
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
A L +M S + +G + KA ++ M DVVT
Sbjct: 509 DKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVT 568
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G C A A +L M +G++P +N ++ L + + +A L M
Sbjct: 569 YGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMA 628
Query: 243 QIGVRPNAFVYNTLMDGFCL-TGRVNRAKELFVSMESMGCTHTVFSYSILING 294
++G P+A Y + G C G + A + + M G S+ +L G
Sbjct: 629 EVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 681
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 110/242 (45%), Gaps = 25/242 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M +++ +FN L L K+K D L ++ S GL P+ TYN ++ +
Sbjct: 483 VFDQM-DLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHY 541
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G + +L + + F + VT+ +LI GLC R A + +R+ G P
Sbjct: 542 CKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTP 601
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
YN ++ L+R + AL+LF EMA E G PD +T
Sbjct: 602 KAYNPVLQSLFRRNNIRDALSLFREMA----EVGEP-------------------PDALT 638
Query: 183 YTSVIRGFCYAN-DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y V RG C EA ++EM+D+G P +F ++ + L G D R ++++
Sbjct: 639 YKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEII 698
Query: 242 IQ 243
++
Sbjct: 699 ME 700
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 185/365 (50%), Gaps = 12/365 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L +N H L + + G PD++TYNI++NC CK G++ +
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ P+ TF +LI LC +R+ EA L ++ V G P+V+T+N LIN L +
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 403
Query: 135 TGHTIVALNLFEEMASGN---GEFGVEGFVD---------KAKELFLQMKDENINPDVVT 182
G +AL LFEEM + E +D KA +L M+ +T
Sbjct: 404 VGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTIT 463
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G C EA+ + +M QG+ N +TFN ++D LCK+ K+D+A L++ MI
Sbjct: 464 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMI 523
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G++PN YN+++ +C G + +A ++ +M + G V +Y LING CK +
Sbjct: 524 SEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQ 583
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL + M KG++P YN + LF + + A LF EM G D TY+
Sbjct: 584 VALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVF 643
Query: 363 DGLCK 367
GLC+
Sbjct: 644 RGLCR 648
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 122/405 (30%), Positives = 200/405 (49%), Gaps = 12/405 (2%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P V +FN L L + T + + + ++S G+ PD T+ L+ F + G
Sbjct: 172 MGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGS 231
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ V R+L + VT LI G C R+ +A + G EP+ TYNT
Sbjct: 232 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 291
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDEN 175
+NGL + H AL + + M + V G +++AK + QM D
Sbjct: 292 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
PD+ T+ ++I C N EA L ++ +GV P+V TFN++++ LCK G A
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 411
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
RL + M G P+ YNTL+D C G++ +A +L MES GC + +Y+ +I+G
Sbjct: 412 RLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGL 471
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
CK IE A ++ +M +GI + + +NTL L + +++ AF+L ++M +G+ +
Sbjct: 472 CKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNN 531
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY + + CK I +A ++ T+ E+D+ Y LI+GL
Sbjct: 532 ITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 576
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 169/362 (46%), Gaps = 47/362 (12%)
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
+ V + L+ L S++ ++++++ G +P+V T+NTL+ L R A+ +
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIML 204
Query: 146 EEMAS--------------------GNGEFGVE--------------------------- 158
EEM+S G+ E +
Sbjct: 205 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL 264
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
G V+ A Q + PD +TY + + G C + A ++ M+ +G P+V T+
Sbjct: 265 GRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTY 324
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
N++++ LCKNG+++EA +L+ M+ G P+ +NTL+ C R+ A +L +
Sbjct: 325 NIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 384
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
G + V++++ILIN CK + AL L+ EM + G PD V YNTL L + ++ +
Sbjct: 385 KGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGK 444
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A L +M+ G T TY T IDGLCK I EA E+F + + + +N LID
Sbjct: 445 ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 504
Query: 399 GL 400
GL
Sbjct: 505 GL 506
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 138/292 (47%), Gaps = 10/292 (3%)
Query: 113 LRVFGCEPNVFTYNTLINGLYRTGHTIV--ALNLFEEMASGNGEF--GVEGFVDKAKELF 168
+R G + L+ + R GH + ++ F + G F V+ +++ + LF
Sbjct: 81 IRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLF 140
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
I D V Y ++ + + + EM +G++P+VVTFN +M LC+
Sbjct: 141 ------GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRA 194
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
++ A +L+ M GV P+ + TLM GF G + A + M MGC+ T +
Sbjct: 195 HQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTV 254
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
++LINGYCK +E AL + ++ G +PD + YNT L + V A K+ D M +
Sbjct: 255 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 314
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+G D +TY ++ LCKN + EA + + C DI +N LI L
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 133/293 (45%), Gaps = 13/293 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FNIL L K L LF+ + ++G PD TYN LI+ C +G++ +
Sbjct: 389 PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDL 448
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + + +T+ ++I GLC + RI EA +F ++ + G N T+NTLI+GL +
Sbjct: 449 LKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCK 508
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
A L +M S + +G + KA ++ M DVVT
Sbjct: 509 DKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVT 568
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G C A A +L M +G++P +N ++ L + + +A L M
Sbjct: 569 YGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMA 628
Query: 243 QIGVRPNAFVYNTLMDGFCL-TGRVNRAKELFVSMESMGCTHTVFSYSILING 294
++G P+A Y + G C G + A + + M G S+ +L G
Sbjct: 629 EVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 681
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 110/242 (45%), Gaps = 25/242 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M +++ +FN L L K+K D L ++ S GL P+ TYN ++ +
Sbjct: 483 VFDQM-DLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHY 541
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G + +L + + F + VT+ +LI GLC R A + +R+ G P
Sbjct: 542 CKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTP 601
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
YN ++ L+R + AL+LF EMA E G PD +T
Sbjct: 602 KAYNPVLQSLFRRNNIRDALSLFREMA----EVGEP-------------------PDALT 638
Query: 183 YTSVIRGFCYAN-DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y V RG C EA ++EM+D+G P +F ++ + L G D R ++++
Sbjct: 639 YKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEII 698
Query: 242 IQ 243
++
Sbjct: 699 ME 700
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 185/365 (50%), Gaps = 12/365 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L +N H L + + G PD++TYNI++NC CK G++ +
Sbjct: 192 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 251
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ P+ TF +LI LC +R+ EA L ++ V G P+V+T+N LIN L +
Sbjct: 252 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 311
Query: 135 TGHTIVALNLFEEMASGN---GEFGVEGFVD---------KAKELFLQMKDENINPDVVT 182
G +AL LFEEM + E +D KA +L M+ +T
Sbjct: 312 VGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTIT 371
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G C EA+ + +M QG+ N +TFN ++D LCK+ K+D+A L++ MI
Sbjct: 372 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMI 431
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G++PN YN+++ +C G + +A ++ +M + G V +Y LING CK +
Sbjct: 432 SEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQ 491
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL + M KG++P YN + LF + + A LF EM G D TY+
Sbjct: 492 VALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVF 551
Query: 363 DGLCK 367
GLC+
Sbjct: 552 RGLCR 556
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 122/405 (30%), Positives = 200/405 (49%), Gaps = 12/405 (2%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P V +FN L L + T + + + ++S G+ PD T+ L+ F + G
Sbjct: 80 MGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGS 139
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ V R+L + VT LI G C R+ +A + G EP+ TYNT
Sbjct: 140 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 199
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDEN 175
+NGL + H AL + + M + V G +++AK + QM D
Sbjct: 200 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 259
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
PD+ T+ ++I C N EA L ++ +GV P+V TFN++++ LCK G A
Sbjct: 260 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 319
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
RL + M G P+ YNTL+D C G++ +A +L MES GC + +Y+ +I+G
Sbjct: 320 RLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGL 379
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
CK IE A ++ +M +GI + + +NTL L + +++ AF+L ++M +G+ +
Sbjct: 380 CKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNN 439
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY + + CK I +A ++ T+ E+D+ Y LI+GL
Sbjct: 440 ITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 484
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 169/362 (46%), Gaps = 47/362 (12%)
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
+ V + L+ L S++ ++++++ G +P+V T+NTL+ L R A+ +
Sbjct: 53 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 112
Query: 146 EEMAS--------------------GNGEFGVE--------------------------- 158
EEM+S G+ E +
Sbjct: 113 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL 172
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
G V+ A Q + PD +TY + + G C + A ++ M+ +G P+V T+
Sbjct: 173 GRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTY 232
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
N++++ LCKNG+++EA +L+ M+ G P+ +NTL+ C R+ A +L +
Sbjct: 233 NIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 292
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
G + V++++ILIN CK + AL L+ EM + G PD V YNTL L + ++ +
Sbjct: 293 KGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGK 352
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A L +M+ G T TY T IDGLCK I EA E+F + + + +N LID
Sbjct: 353 ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 412
Query: 399 GL 400
GL
Sbjct: 413 GL 414
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 147/333 (44%), Gaps = 47/333 (14%)
Query: 115 VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VD 162
+FG + + YN L+N L + +++ EM + + V F V
Sbjct: 47 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVR 106
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA---KCLLIEM------------- 206
A + +M + PD T+T++++GF A K ++EM
Sbjct: 107 TAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 166
Query: 207 -------------------MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
+ G +P+ +T+N ++ LC+N + A +++D+M+Q G
Sbjct: 167 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 226
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P+ F YN +++ C G++ AK + M GC + +++ LI C +E AL L
Sbjct: 227 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 286
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
++ KG+ PDV +N L L ++ A +LF+EM+ G D TY T ID LC
Sbjct: 287 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 346
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +A++L + + C YN +IDGL
Sbjct: 347 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGL 379
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 134/277 (48%), Gaps = 10/277 (3%)
Query: 128 LINGLYRTGHTIV--ALNLFEEMASGNGEF--GVEGFVDKAKELFLQMKDENINPDVVTY 183
L+ + R GH + ++ F + G F V+ +++ + LF I D V Y
Sbjct: 4 LVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLF------GIQADTVVY 57
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
++ + + + EM +G++P+VVTFN +M LC+ ++ A +L+ M
Sbjct: 58 NHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSS 117
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
GV P+ + TLM GF G + A + M MGC+ T + ++LINGYCK +E
Sbjct: 118 RGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVED 177
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
AL + ++ G +PD + YNT L + V A K+ D M ++G D +TY ++
Sbjct: 178 ALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVN 237
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LCKN + EA + + C DI +N LI L
Sbjct: 238 CLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 274
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 133/293 (45%), Gaps = 13/293 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FNIL L K L LF+ + ++G PD TYN LI+ C +G++ +
Sbjct: 297 PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDL 356
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + + +T+ ++I GLC + RI EA +F ++ + G N T+NTLI+GL +
Sbjct: 357 LKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCK 416
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
A L +M S + +G + KA ++ M DVVT
Sbjct: 417 DKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVT 476
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G C A A +L M +G++P +N ++ L + + +A L M
Sbjct: 477 YGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMA 536
Query: 243 QIGVRPNAFVYNTLMDGFCL-TGRVNRAKELFVSMESMGCTHTVFSYSILING 294
++G P+A Y + G C G + A + + M G S+ +L G
Sbjct: 537 EVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 589
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 110/242 (45%), Gaps = 25/242 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M +++ +FN L L K+K D L ++ S GL P+ TYN ++ +
Sbjct: 391 VFDQM-DLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHY 449
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G + +L + + F + VT+ +LI GLC R A + +R+ G P
Sbjct: 450 CKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTP 509
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
YN ++ L+R + AL+LF EMA E G PD +T
Sbjct: 510 KAYNPVLQSLFRRNNIRDALSLFREMA----EVGEP-------------------PDALT 546
Query: 183 YTSVIRGFCYAND-WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y V RG C EA ++EM+D+G P +F ++ + L G D R ++++
Sbjct: 547 YKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEII 606
Query: 242 IQ 243
++
Sbjct: 607 ME 608
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 124/378 (32%), Positives = 194/378 (51%), Gaps = 12/378 (3%)
Query: 35 TVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 94
V+ + R+ S G+ P+L YN +IN CK G V+ ++ ++ S +P+ T+TS+I
Sbjct: 198 AVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMI 257
Query: 95 KGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM------ 148
G C + + A +F ++ GCEPN TY+TLINGL +G A +L EM
Sbjct: 258 LGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGIL 317
Query: 149 ASGNGEFGV------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
+ + G G + A LF+ MK++ P+V TYT++I G C + A L
Sbjct: 318 PTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGL 377
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
M GV PN VT+N +++ L +N ++ A +L+LM + G PN YN ++ G+C+
Sbjct: 378 FHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCI 437
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G +A + +M G + + +Y+ +I GYC + AL + M G KPD
Sbjct: 438 LGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWS 497
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
Y L +I ++E AF LF+EM DG+ + TY IDG CK+ + A L ++
Sbjct: 498 YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 557
Query: 383 ILKCELDIRAYNCLIDGL 400
C +++ YN LI GL
Sbjct: 558 RSGCRPNVQTYNVLIHGL 575
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 193/384 (50%), Gaps = 15/384 (3%)
Query: 31 KH-YDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVT 89
KH D+ L +F ++ G P+ TY+ LIN C GRV+ F ++ ++ P A T
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322
Query: 90 FTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
T I LC +A LF ++ GCEPNV+TY LI+GL +G VA+ LF M
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRM- 381
Query: 150 SGNGEFG------------VEGFVDKAKELFLQMKDEN-INPDVVTYTSVIRGFCYANDW 196
S +G F VE K + L + N +P++VTY +I+G+C D
Sbjct: 382 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDP 441
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+A ++ M+ +G N+VT+N I+ C +G A R+LDLM G +P+ + Y L
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ GFC ++ A LF M G +Y+ LI+GYCK+++++ A SL M G
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+P+V YN L L + + A +L M +G+ + TY IDGLCKN A+E
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
+F + C ++ Y+ LI L
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRAL 645
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 186/386 (48%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L L + + LF R++ G+FP+ TYN LIN + R+ + FVV
Sbjct: 353 PNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 412
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + R+ +PN VT+ +IKG C +A + + G N+ TYNT+I G
Sbjct: 413 LNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+G+T AL + + M+D PD +YT +I GFC +
Sbjct: 473 SGNTTSALRILD-----------------------LMRDGGCKPDEWSYTELICGFCKIS 509
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
A L EM+D G+ PN VT+ ++D CK+ K+D A+ LL+ M + G RPN YN
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 569
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ G + A+EL M G V +Y+ +I+G CKN AL ++ +M+ +
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G P+++ Y++L L + +VE A LF E++R G+ D TY I+ + + A
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ C+ + Y LI GL
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKGL 715
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 185/441 (41%), Gaps = 82/441 (18%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N + + + + L + + G PD ++Y LI FCK+ ++ F + +
Sbjct: 462 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ PN VT+T+LI G C + ++ A +L ++ GC PNV TYN LI+GL + +
Sbjct: 522 VDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNN- 580
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
A+EL M +E I P+VVTYT++I G C +
Sbjct: 581 ----------------------FSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSL 618
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A + +M++QG PN++T++ ++ L + GK++EA L + + G+ P+ Y +++
Sbjct: 619 ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIE 678
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN------------------------- 293
+ ++G+V A M GC T+++Y +LI
Sbjct: 679 AYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSF 738
Query: 294 GY------------CKNKEIEGALS----------------------LYGEMLSKGIKPD 319
GY K E++ LS L G M+S+G+ PD
Sbjct: 739 GYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 798
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
YN+L L + V+ A +F M G Y+ I LC+ EA F
Sbjct: 799 QEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFE 858
Query: 380 TLRILKCELDIRAYNCLIDGL 400
+ + D LIDGL
Sbjct: 859 NMLMRTWNPDDVVQAVLIDGL 879
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 145/342 (42%), Gaps = 58/342 (16%)
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN 152
LIK ++ + + L G +F Y+ L+ L R G T ++ + M S
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLS-- 208
Query: 153 GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
E + P+++ Y +VI C + +A+ ++ ++ + +
Sbjct: 209 ---------------------EGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMS 247
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR---- 268
P+ T+ ++ C+ +D A ++ + M + G PN Y+TL++G C +GRVN
Sbjct: 248 PDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDL 307
Query: 269 -------------------------------AKELFVSMESMGCTHTVFSYSILINGYCK 297
A LFV M++ GC V++Y+ LI+G C
Sbjct: 308 IREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCV 367
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+ ++ A+ L+ M G+ P+ V YN L +L E +++ AF + + M R+G + + T
Sbjct: 368 SGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVT 427
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
Y I G C +A+ + + ++ YN +I G
Sbjct: 428 YNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKG 469
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 152/365 (41%), Gaps = 41/365 (11%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F+ M++ P V ++ L K++ DT SL + + +G P++ TYN+LI+
Sbjct: 515 FGLFNEMVDDGLCPNEV-TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIH 573
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
K S + ++ PN VT+T++I GLC A +F K+ GC P
Sbjct: 574 GLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLP 633
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELF 168
N+ TY++LI L + G A NLF E+ + + G V+ A
Sbjct: 634 NLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFL 693
Query: 169 LQMKDENINPDVVTYTSVIRG-----------------------FCYANDWNEAKCLL-- 203
+M P + TY +I+G F Y +A ++
Sbjct: 694 GRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSA 753
Query: 204 -IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
+ +D G+ +V N ++ L G+ EA+ LL MI G+ P+ YN+L+
Sbjct: 754 KLAELDPGL--SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLR 811
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
V+ A +F M + GC + Y LI C+ + A + ML + PD V+
Sbjct: 812 VRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVV 871
Query: 323 YNTLF 327
L
Sbjct: 872 QAVLI 876
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 100/211 (47%), Gaps = 1/211 (0%)
Query: 191 CYANDWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
C++ + ++M+ Q G++ + ++ ++ L + G M+ GV+PN
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
+YN +++ C G V A+ + + + F+Y+ +I G+C+ +++ AL ++
Sbjct: 215 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
+M +G +P+ V Y+TL L + +V AF L EM G+ T I LC
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 334
Query: 370 YIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+A LF ++ CE ++ Y LI GL
Sbjct: 335 CYEDAWRLFVDMKNKGCEPNVYTYTALISGL 365
>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
Length = 495
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 129/403 (32%), Positives = 202/403 (50%), Gaps = 28/403 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IFD ML + P + ++ I+ L + D L L + + S L P + N+L++C
Sbjct: 59 IFDDML-YKECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCL 117
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G+V + + R+ C + + +++ L GLC +I A A+F ++ P++
Sbjct: 118 CKNGKVDAAYELYKRLSDEC-SLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSL 176
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TYN L+ G R G A+ L EEM G K ++ PD+ +
Sbjct: 177 LTYNGLLYGYCRAGRMEQAMTLLEEMIEGK-------------------KGSDVVPDMYS 217
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +VI GFC A A+ +L M+ G PNVVTFN ++D LC GK+DEA+ + + M+
Sbjct: 218 YNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMV 277
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ P A Y L+ G R+++A + FV M G V++Y+ LI G C ++E
Sbjct: 278 ERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVE 337
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA---ADTWTYR 359
AL + M S G +P+VV Y + L + Q+ERA KLF++ A D++ Y
Sbjct: 338 DALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYS 397
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRA--YNCLIDGL 400
T I LC+ S +EA E F LR+++ +L + Y + DGL
Sbjct: 398 TIIYWLCRQSKFLEAYEYF--LRMVESKLVAKPHIYKAMADGL 438
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 177/364 (48%), Gaps = 18/364 (4%)
Query: 52 LYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 111
++TYN +N K G S + +L PN T+ +++GLC +++ A L
Sbjct: 37 VFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQ 96
Query: 112 KLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG---------EFGV--EGF 160
+ P F N L++ L + G A L++ ++ +G+
Sbjct: 97 DMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSLDRISYNMLTYGLCKADQ 156
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD----QGVQPNVV 216
+D+A +F +M++ + P ++TY ++ G+C A +A LL EM++ V P++
Sbjct: 157 IDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMY 216
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
++N ++ CK ++ A +L MI+ G PN +NTL+DG CLTG+++ A +F M
Sbjct: 217 SYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYM 276
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
C T +Y++LI G+ + I+ A + +ML +G++P+V Y L L + ++V
Sbjct: 277 VERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKV 336
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL---RILKCELDIRAY 393
E A ++ M G + TY I LCK I A +LF R KC+ D AY
Sbjct: 337 EDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYAY 396
Query: 394 NCLI 397
+ +I
Sbjct: 397 STII 400
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 154/340 (45%), Gaps = 30/340 (8%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S+N+L L K D L++F + + P L TYN L+ +C+ GR+ +L +
Sbjct: 143 SYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEM 202
Query: 79 LR----SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ S P+ ++ ++I G C ++ A + ++ GC PNV T+NTL++GL
Sbjct: 203 IEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCL 262
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
TG +D+A +F M + N P VTYT +I G A
Sbjct: 263 TGK-----------------------LDEANAMFEYMVERNCEPTAVTYTVLITGHARAL 299
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
++A ++M+ +GV+PNV T+ ++ LC K+++A +L M G PN Y
Sbjct: 300 RIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYT 359
Query: 255 TLMDGFCLTGRVNRAKELF---VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
++ C G++ RA +LF + + C ++YS +I C+ + A + M
Sbjct: 360 RVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIIYWLCRQSKFLEAYEYFLRM 419
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
+ + IY + L + + E+ ++ E G+
Sbjct: 420 VESKLVAKPHIYKAMADGLELVQETEKVERVCLEASAHGI 459
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 138/310 (44%), Gaps = 33/310 (10%)
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG 153
IK SR+ + AA R E VFTYN +N L + GH
Sbjct: 14 IKSPKLASRVFKWAA-----RQEDFEHTVFTYNAYLNALVKGGHG--------------- 53
Query: 154 EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
KA+++F M + P++ TY V+RG C + A LL +M + + P
Sbjct: 54 --------SKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTP 105
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
N+++ LCKNGK+D A L + + YN L G C +++RA +F
Sbjct: 106 TTFIVNMLVSCLCKNGKVDAAYELYKRLSD-ECSLDRISYNMLTYGLCKADQIDRALAVF 164
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML--SKG--IKPDVVIYNTLFVV 329
ME ++ +Y+ L+ GYC+ +E A++L EM+ KG + PD+ YNT+
Sbjct: 165 GEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISG 224
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
+ Q+ A + M + G + + T+ T +DGLC + EA +F + CE
Sbjct: 225 FCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPT 284
Query: 390 IRAYNCLIDG 399
Y LI G
Sbjct: 285 AVTYTVLITG 294
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 115/233 (49%), Gaps = 5/233 (2%)
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ E+ V TY + + ++A+ + +M+ + PN+ T+ +++ LC + K
Sbjct: 29 RQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKT 88
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
D A LL M + P F+ N L+ C G+V+ A EL+ + S C+ SY++L
Sbjct: 89 DAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRL-SDECSLDRISYNML 147
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM----Q 347
G CK +I+ AL+++GEM + P ++ YN L ++E+A L +EM +
Sbjct: 148 TYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKK 207
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
V D ++Y T I G CK + A + R + C ++ +N L+DGL
Sbjct: 208 GSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGL 260
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 124/378 (32%), Positives = 194/378 (51%), Gaps = 12/378 (3%)
Query: 35 TVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 94
V+ + R+ S G+ P+L YN +IN CK G V+ ++ ++ S +P+ T+TS+I
Sbjct: 198 AVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMI 257
Query: 95 KGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM------ 148
G C + + A +F ++ GCEPN TY+TLINGL +G A +L EM
Sbjct: 258 LGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGIL 317
Query: 149 ASGNGEFGV------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
+ + G G + A LF+ MK++ P+V TYT++I G C + A L
Sbjct: 318 PTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGL 377
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
M GV PN VT+N +++ L +N ++ A +L+LM + G PN YN ++ G+C+
Sbjct: 378 FHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCI 437
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G +A + +M G + + +Y+ +I GYC + AL + M G KPD
Sbjct: 438 LGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWS 497
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
Y L +I ++E AF LF+EM DG+ + TY IDG CK+ + A L ++
Sbjct: 498 YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 557
Query: 383 ILKCELDIRAYNCLIDGL 400
C +++ YN LI GL
Sbjct: 558 RSGCRPNVQTYNVLIHGL 575
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 193/384 (50%), Gaps = 15/384 (3%)
Query: 31 KH-YDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVT 89
KH D+ L +F ++ G P+ TY+ LIN C GRV+ F ++ ++ P A T
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322
Query: 90 FTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
T I LC +A LF ++ GCEPNV+TY LI+GL +G VA+ LF M
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM- 381
Query: 150 SGNGEFG------------VEGFVDKAKELFLQMKDEN-INPDVVTYTSVIRGFCYANDW 196
S +G F VE K + L + N +P++VTY +I+G+C D
Sbjct: 382 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDP 441
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+A ++ M+ +G N+VT+N I+ C +G A R+LDLM G +P+ + Y L
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ GFC ++ A LF M G +Y+ LI+GYCK+++++ A SL M G
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+P+V YN L L + + A +L M +G+ + TY IDGLCKN A+E
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
+F + C ++ Y+ LI L
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRAL 645
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 186/386 (48%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L L + + LF R++ G+FP+ TYN LIN + R+ + FVV
Sbjct: 353 PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 412
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + R+ +PN VT+ +IKG C +A + + G N+ TYNT+I G
Sbjct: 413 LNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+G+T AL + + M+D PD +YT +I GFC +
Sbjct: 473 SGNTTSALRILD-----------------------LMRDGGCKPDEWSYTELICGFCKIS 509
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
A L EM+D G+ PN VT+ ++D CK+ K+D A+ LL+ M + G RPN YN
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 569
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ G + A+EL M G V +Y+ +I+G CKN AL ++ +M+ +
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G P+++ Y++L L + +VE A LF E++R G+ D TY I+ + + A
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ C+ + Y LI GL
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKGL 715
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 185/441 (41%), Gaps = 82/441 (18%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N + + + + L + + G PD ++Y LI FCK+ ++ F + +
Sbjct: 462 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ PN VT+T+LI G C + ++ A +L ++ GC PNV TYN LI+GL + +
Sbjct: 522 VDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNN- 580
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
A+EL M +E I P+VVTYT++I G C +
Sbjct: 581 ----------------------FSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSL 618
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A + +M++QG PN++T++ ++ L + GK++EA L + + G+ P+ Y +++
Sbjct: 619 ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIE 678
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN------------------------- 293
+ ++G+V A M GC T+++Y +LI
Sbjct: 679 AYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSF 738
Query: 294 GY------------CKNKEIEGALS----------------------LYGEMLSKGIKPD 319
GY K E++ LS L G M+S+G+ PD
Sbjct: 739 GYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 798
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
YN+L L + V+ A +F M G Y+ I LC+ EA F
Sbjct: 799 QEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFE 858
Query: 380 TLRILKCELDIRAYNCLIDGL 400
+ + D LIDGL
Sbjct: 859 NMLMRTWNPDDVVQAVLIDGL 879
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 145/342 (42%), Gaps = 58/342 (16%)
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN 152
LIK ++ + + L G +F Y+ L+ L R G T ++ + M S
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLS-- 208
Query: 153 GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
E + P+++ Y +VI C + +A+ ++ ++ + +
Sbjct: 209 ---------------------EGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMS 247
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR---- 268
P+ T+ ++ C+ +D A ++ + M + G PN Y+TL++G C +GRVN
Sbjct: 248 PDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDL 307
Query: 269 -------------------------------AKELFVSMESMGCTHTVFSYSILINGYCK 297
A LFV M++ GC V++Y+ LI+G C
Sbjct: 308 IREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCV 367
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+ ++ A+ L+ M G+ P+ V YN L +L E +++ AF + + M R+G + + T
Sbjct: 368 SGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVT 427
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
Y I G C +A+ + + ++ YN +I G
Sbjct: 428 YNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKG 469
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 167/411 (40%), Gaps = 56/411 (13%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F+ M++ P V ++ L K++ DT SL + + +G P++ TYN+LI+
Sbjct: 515 FGLFNEMVDDGLCPNEV-TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIH 573
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
K S + ++ PN VT+T++I GLC A +F K+ GC P
Sbjct: 574 GLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLP 633
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELF 168
N+ TY++LI L + G A NLF E+ + + G V+ A
Sbjct: 634 NLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFL 693
Query: 169 LQMKDENINPDVVTYTSVIRG-----------------------FCYANDWNEAKCLL-- 203
+M P + TY +I+G F Y +A ++
Sbjct: 694 GRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSA 753
Query: 204 -IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
+ +D G+ +V N ++ L G+ EA+ LL MI G+ P+ YN+L+
Sbjct: 754 KLAELDPGL--SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLR 811
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
V+ A +F M + GC + Y LI C+ + A + ML + PD V+
Sbjct: 812 VRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVV 871
Query: 323 YNTL---------------FVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
L F+ + E + +F ++ + R+ +W +
Sbjct: 872 QAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASKKRSWKH 922
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 100/211 (47%), Gaps = 1/211 (0%)
Query: 191 CYANDWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
C++ + ++M+ Q G++ + ++ ++ L + G M+ GV+PN
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
+YN +++ C G V A+ + + + F+Y+ +I G+C+ +++ AL ++
Sbjct: 215 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
+M +G +P+ V Y+TL L + +V AF L EM G+ T I LC
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 334
Query: 370 YIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+A LF ++ CE ++ Y LI GL
Sbjct: 335 CYEDAWRLFVDMKNKGCEPNVYTYTALISGL 365
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 195/382 (51%), Gaps = 23/382 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S +L K + L ++ G PD T+N L+N FC++G V+ ++ +
Sbjct: 230 SVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFM 289
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ F P+ T+ SLI G+C +A + ++ + C PN TYNTLI+ L +
Sbjct: 290 IEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCK---- 345
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
E ++ A +L + + + PDV T+ ++I+G C + + +
Sbjct: 346 -------------------ENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDI 386
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A + EM ++G +P+ T+++++D LC ++ EA LL M G NA VYNTL+D
Sbjct: 387 AMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLID 446
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G C + R+ A+E+F ME +G + + +Y+ LI+G CKNK +E A L +M+ +G+KP
Sbjct: 447 GLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKP 506
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
D YN+L + +E+A + M +G D +TY T I GLC+ + A +L
Sbjct: 507 DKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLL 566
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
R++++ L AYN +I L
Sbjct: 567 RSVQMKGIVLTPHAYNPVIQAL 588
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 204/396 (51%), Gaps = 14/396 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +NI L ++ V L ++ + G+ D+ T+N+LI CK ++ ++
Sbjct: 121 PDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILM 180
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P+ +TFT+L++G E + A + ++ +GC + L+NG +
Sbjct: 181 LEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCK 240
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G AL E++ NG F G V+ A ++ M ++ +PDV
Sbjct: 241 EGRVEEALRFVLEVSEEGFSPDQVTFNSLVNG-FCRIGNVNDALDIVDFMIEKGFDPDVY 299
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY S+I G C ++ +A +L +M+ + PN VT+N ++ LCK +++ A+ L ++
Sbjct: 300 TYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARIL 359
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G+ P+ +NTL+ G CL+ + A E+F M++ GC F+YSILI+ C + +
Sbjct: 360 VSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRL 419
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ AL L EM S G + V+YNTL L + ++E A ++FD+M+ GV+ + TY T
Sbjct: 420 KEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTL 479
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
IDGLCKN + EA +L + + + D YN L+
Sbjct: 480 IDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLL 515
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/376 (32%), Positives = 189/376 (50%), Gaps = 15/376 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FN L + + + L + + G PD+YTYN LI+ CK+G +
Sbjct: 261 PDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEI 320
Query: 75 LGR-ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
L + ILR C +PN VT+ +LI LC E+ I A L L G P+V T+NTLI GL
Sbjct: 321 LQQMILREC-SPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLC 379
Query: 134 RTGHTIVALNLFEEMASGN---GEFGVEGFVD---------KAKELFLQMKDENINPDVV 181
+ + +A+ +FEEM + EF +D +A L +M+ + V
Sbjct: 380 LSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAV 439
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y ++I G C + +A+ + +M GV + VT+N ++D LCKN +++EAS+L+D M
Sbjct: 440 VYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQM 499
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
I G++P+ F YN+L+ FC G + +A ++ +M S GC +F+Y LI G C+ +
Sbjct: 500 IMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRV 559
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A L + KGI YN + LF + + +LF EM D T++
Sbjct: 560 DVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIV 619
Query: 362 IDGLCK-NSYIVEAVE 376
GLC I EA++
Sbjct: 620 FRGLCNGGGPIQEAID 635
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 192/402 (47%), Gaps = 18/402 (4%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
P PP L L ++ +D++ +L K+L S+G P+ T+ LI F + +
Sbjct: 53 HPLPPN----ETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIEN 108
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+L L F P+ + + L ++++ L +K+ G +V T+N LI
Sbjct: 109 LLKILENEL--GFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIK 166
Query: 131 GLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINP 178
L + A+ + EEMA+ + F EG ++ A ++ QM
Sbjct: 167 ALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLL 226
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
V+ ++ GFC EA ++E+ ++G P+ VTFN +++ C+ G +++A ++
Sbjct: 227 TNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIV 286
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
D MI+ G P+ + YN+L+ G C G +A E+ M C+ +Y+ LI+ CK
Sbjct: 287 DFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKE 346
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
EIE A L ++SKG+ PDV +NTL L + A ++F+EM+ G D +TY
Sbjct: 347 NEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTY 406
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
ID LC + EA+ L + + C + YN LIDGL
Sbjct: 407 SILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGL 448
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 175/397 (44%), Gaps = 35/397 (8%)
Query: 10 MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS 69
+R P ++N L L K + L + L S GL PD+ T+N LI C
Sbjct: 326 LRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQD 385
Query: 70 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
+ + P+ T++ LI LC E R+ EA L ++ GC N YNTLI
Sbjct: 386 IAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLI 445
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRG 189
+GL ++ ++ A+E+F QM+ ++ VTY ++I G
Sbjct: 446 DGLCKSRR-----------------------IEDAEEIFDQMELLGVSRSSVTYNTLIDG 482
Query: 190 FCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
C EA L+ +M+ +G++P+ T+N ++ C+ G +++A ++ M G P+
Sbjct: 483 LCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPD 542
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
F Y TL+ G C GRV+ A +L S++ G T +Y+ +I K + + L+
Sbjct: 543 IFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFR 602
Query: 310 EMLSKGIKPDVVIYNTLFVVLFE-IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
EM+ K PD + + +F L ++ A EM G+ + ++ +GLC
Sbjct: 603 EMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSL 662
Query: 369 SYIVEAVELF-----------RTLRILKCELDIRAYN 394
S +EL R +++ L IR +N
Sbjct: 663 SMEDTLIELINMVMEKAQMSERETSMIRGFLKIRKFN 699
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 103/253 (40%), Gaps = 47/253 (18%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IFD M + S V ++N L L KNK + L ++ GL PD +TYN L+ F
Sbjct: 460 IFDQMELLGVSRSSV-TYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYF 518
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C++G + ++ + + P+ T+ +LI GLC R+ A+ L +++ G
Sbjct: 519 CRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTP 578
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN-------------GEFGVEGFVDKAKELFL 169
YN +I L+ T + LF EM + G G + +A + +
Sbjct: 579 HAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTV 638
Query: 170 QMKDENINPDVVTY---------------------------------TSVIRGFCYANDW 196
+M ++ I P+ ++ TS+IRGF +
Sbjct: 639 EMLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEKAQMSERETSMIRGFLKIRKF 698
Query: 197 NEAKCLLIEMMDQ 209
N+A L ++D+
Sbjct: 699 NDALANLGGILDR 711
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 124/378 (32%), Positives = 194/378 (51%), Gaps = 12/378 (3%)
Query: 35 TVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 94
V+ + R+ S G+ P+L YN +IN CK G V+ ++ ++ S +P+ T+TS+I
Sbjct: 198 AVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMI 257
Query: 95 KGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM------ 148
G C + + A +F ++ GCEPN TY+TLINGL +G A +L EM
Sbjct: 258 LGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGIL 317
Query: 149 ASGNGEFGV------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
+ + G G + A LF+ MK++ P+V TYT++I G C + A L
Sbjct: 318 PTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGL 377
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
M GV PN VT+N +++ L +N ++ A +L+LM + G PN YN ++ G+C+
Sbjct: 378 FHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCI 437
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G +A + +M G + + +Y+ +I GYC + AL + M G KPD
Sbjct: 438 LGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWS 497
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
Y L +I ++E AF LF+EM DG+ + TY IDG CK+ + A L ++
Sbjct: 498 YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 557
Query: 383 ILKCELDIRAYNCLIDGL 400
C +++ YN LI GL
Sbjct: 558 RSGCRPNVQTYNVLIHGL 575
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 193/384 (50%), Gaps = 15/384 (3%)
Query: 31 KH-YDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVT 89
KH D+ L +F ++ G P+ TY+ LIN C GRV+ F ++ ++ P A T
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322
Query: 90 FTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
T I LC +A LF ++ GCEPNV+TY LI+GL +G VA+ LF M
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM- 381
Query: 150 SGNGEFG------------VEGFVDKAKELFLQMKDEN-INPDVVTYTSVIRGFCYANDW 196
S +G F VE K + L + N +P++VTY +I+G+C D
Sbjct: 382 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDP 441
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+A ++ M+ +G N+VT+N I+ C +G A R+LDLM G +P+ + Y L
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ GFC ++ A LF M G +Y+ LI+GYCK+++++ A SL M G
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+P+V YN L L + + A +L M +G+ + TY IDGLCKN A+E
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
+F + C ++ Y+ LI L
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRAL 645
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 186/386 (48%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L L + + LF R++ G+FP+ TYN LIN + R+ + FVV
Sbjct: 353 PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 412
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + R+ +PN VT+ +IKG C +A + + G N+ TYNT+I G
Sbjct: 413 LNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+G+T AL + + M+D PD +YT +I GFC +
Sbjct: 473 SGNTTSALRILD-----------------------LMRDGGCKPDEWSYTELICGFCKIS 509
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
A L EM+D G+ PN VT+ ++D CK+ K+D A+ LL+ M + G RPN YN
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 569
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ G + A+EL M G V +Y+ +I+G CKN AL ++ +M+ +
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G P+++ Y++L L + +VE A LF E++R G+ D TY I+ + + A
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ C+ + Y LI GL
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKGL 715
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 185/441 (41%), Gaps = 82/441 (18%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N + + + + L + + G PD ++Y LI FCK+ ++ F + +
Sbjct: 462 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ PN VT+T+LI G C + ++ A +L ++ GC PNV TYN LI+GL + +
Sbjct: 522 VDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNN- 580
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
A+EL M +E I P+VVTYT++I G C +
Sbjct: 581 ----------------------FSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSL 618
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A + +M++QG PN++T++ ++ L + GK++EA L + + G+ P+ Y +++
Sbjct: 619 ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIE 678
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN------------------------- 293
+ ++G+V A M GC T+++Y +LI
Sbjct: 679 AYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSF 738
Query: 294 GY------------CKNKEIEGALS----------------------LYGEMLSKGIKPD 319
GY K E++ LS L G M+S+G+ PD
Sbjct: 739 GYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 798
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
YN+L L + V+ A +F M G Y+ I LC+ EA F
Sbjct: 799 QEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFE 858
Query: 380 TLRILKCELDIRAYNCLIDGL 400
+ + D LIDGL
Sbjct: 859 NMLMRTWNPDDVVQAVLIDGL 879
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 145/342 (42%), Gaps = 58/342 (16%)
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN 152
LIK ++ + + L G +F Y+ L+ L R G T ++ + M S
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLS-- 208
Query: 153 GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
E + P+++ Y +VI C + +A+ ++ ++ + +
Sbjct: 209 ---------------------EGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMS 247
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR---- 268
P+ T+ ++ C+ +D A ++ + M + G PN Y+TL++G C +GRVN
Sbjct: 248 PDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDL 307
Query: 269 -------------------------------AKELFVSMESMGCTHTVFSYSILINGYCK 297
A LFV M++ GC V++Y+ LI+G C
Sbjct: 308 IREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCV 367
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+ ++ A+ L+ M G+ P+ V YN L +L E +++ AF + + M R+G + + T
Sbjct: 368 SGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVT 427
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
Y I G C +A+ + + ++ YN +I G
Sbjct: 428 YNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKG 469
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 152/365 (41%), Gaps = 41/365 (11%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F+ M++ P V ++ L K++ DT SL + + +G P++ TYN+LI+
Sbjct: 515 FGLFNEMVDDGLCPNEV-TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIH 573
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
K S + ++ PN VT+T++I GLC A +F K+ GC P
Sbjct: 574 GLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLP 633
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELF 168
N+ TY++LI L + G A NLF E+ + + G V+ A
Sbjct: 634 NLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFL 693
Query: 169 LQMKDENINPDVVTYTSVIRG-----------------------FCYANDWNEAKCLL-- 203
+M P + TY +I+G F Y +A ++
Sbjct: 694 GRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSA 753
Query: 204 -IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
+ +D G+ +V N ++ L G+ EA+ LL MI G+ P+ YN+L+
Sbjct: 754 KLAELDPGL--SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLR 811
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
V+ A +F M + GC + Y LI C+ + A + ML + PD V+
Sbjct: 812 VRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVV 871
Query: 323 YNTLF 327
L
Sbjct: 872 QAVLI 876
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 100/211 (47%), Gaps = 1/211 (0%)
Query: 191 CYANDWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
C++ + ++M+ Q G++ + ++ ++ L + G M+ GV+PN
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
+YN +++ C G V A+ + + + F+Y+ +I G+C+ +++ AL ++
Sbjct: 215 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
+M +G +P+ V Y+TL L + +V AF L EM G+ T I LC
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 334
Query: 370 YIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+A LF ++ CE ++ Y LI GL
Sbjct: 335 CYEDAWRLFVDMKNKGCEPNVYTYTALISGL 365
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 187/365 (51%), Gaps = 12/365 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L +N H L + + G PD++TYNI++NC CK G++ +
Sbjct: 288 PDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 347
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ P+ TF +LI LC+ +R+ EA L ++ + G P+V+T+N LIN L +
Sbjct: 348 LNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCK 407
Query: 135 TGHTIVALNLFEEMASGN---GEFGVEGFVD---------KAKELFLQMKDENINPDVVT 182
G +AL LFEEM S E +D KA +L +M+ VT
Sbjct: 408 VGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVT 467
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G C EA+ + +M QG+ N +TFN ++D LCK+ ++D+A++L+ MI
Sbjct: 468 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMI 527
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G++PN YN+++ +C G + +A ++ +M + G V +Y LING CK +
Sbjct: 528 SEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQ 587
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL L M KG++ YN + LF + A LF EM G D +TY+
Sbjct: 588 VALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVF 647
Query: 363 DGLCK 367
GLC+
Sbjct: 648 RGLCR 652
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 200/398 (50%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FN L L + T + + + ++S+G+ PD T+ L+ F + G + V
Sbjct: 183 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRV 242
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R+L +P VT LI G C R+ +A + G EP+ TYNT +NGL +
Sbjct: 243 KARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQ 302
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
GH AL + + M + V G +++AK + QM + PD+ T
Sbjct: 303 NGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITT 362
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ ++I C N EA L ++ +G+ P+V TFN++++ LCK G A RL + M
Sbjct: 363 FNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMK 422
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G P+ YNTL+D C G++ +A +L MES GC + +Y+ +I+G CK IE
Sbjct: 423 SSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIE 482
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A ++ +M +GI + + +NTL L + +++ A +L +M +G+ + TY + +
Sbjct: 483 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSIL 542
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
CK I +A ++ +T+ E+D+ Y LI+GL
Sbjct: 543 THYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGL 580
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 189/382 (49%), Gaps = 25/382 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+N L L + + +++ + G+ PD+ T+N L+ C+ +V ++L +
Sbjct: 153 YNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMS 212
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
S P+ TFT+L++G E I A + ++ GC P T N LING + G
Sbjct: 213 SSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVE 272
Query: 140 VALN-LFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
AL + +E+A+G PD +TY + + G C
Sbjct: 273 DALGYIQQEIANG------------------------FEPDQITYNTFVNGLCQNGHVGH 308
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A ++ M+ +G P+V T+N++++ LCKNG+++EA +L+ M++ G P+ +NTL+
Sbjct: 309 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIV 368
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
C R+ A +L + G + V++++ILIN CK + + AL L+ EM S G P
Sbjct: 369 ALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTP 428
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
D V YNTL L + ++ +A L EM+ G T TY T IDGLCK I EA E+F
Sbjct: 429 DEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVF 488
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
+ + + +N LIDGL
Sbjct: 489 DQMDLQGISRNAITFNTLIDGL 510
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 162/327 (49%), Gaps = 12/327 (3%)
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
+ V + L+ L S++ +++++ G +P+V T+NTL+ L R A+ +
Sbjct: 149 DTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLML 208
Query: 146 EEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
EEM+S F EG + A + +M + +P VT +I G+C
Sbjct: 209 EEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKL 268
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+A + + + G +P+ +T+N ++ LC+NG + A +++D+M+Q G P+ F Y
Sbjct: 269 GRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTY 328
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N +++ C G++ AK + M GC + +++ LI C +E AL L ++
Sbjct: 329 NIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTL 388
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG+ PDV +N L L ++ + A +LF+EM+ G D TY T ID LC + +
Sbjct: 389 KGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGK 448
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A++L + + C YN +IDGL
Sbjct: 449 ALDLLKEMESAGCPRSTVTYNTIIDGL 475
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 144/302 (47%), Gaps = 20/302 (6%)
Query: 115 VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEG--------------- 159
+FG + + YN L+N L + L E + S GE G++
Sbjct: 143 LFGIQADTVVYNHLLNVLVEGSK----MKLLETVYSEMGERGIKPDVVTFNTLMKALCRA 198
Query: 160 -FVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
V A + +M + PD T+T++++GF A + M++ G P VT
Sbjct: 199 HQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTV 258
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
NV+++ CK G++++A + I G P+ YNT ++G C G V A ++ M
Sbjct: 259 NVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQ 318
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
G VF+Y+I++N CKN ++E A + +M+ +G PD+ +NTL V L +++E
Sbjct: 319 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEE 378
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A L ++ G++ D +T+ I+ LCK A+ LF ++ C D YN LID
Sbjct: 379 ALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLID 438
Query: 399 GL 400
L
Sbjct: 439 NL 440
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 134/278 (48%), Gaps = 12/278 (4%)
Query: 128 LINGLYRTGHTI---VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDE--NINPDVVT 182
L+ + R GH + V + E A + FVD A +L L D I D V
Sbjct: 100 LVTEMRREGHQVRVGVVHSFLESYARQ------QLFVD-AVDLVLNQLDPLFGIQADTVV 152
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++ + + + EM ++G++P+VVTFN +M LC+ ++ A +L+ M
Sbjct: 153 YNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMS 212
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
GV P+ + TLM GF G + A + M MGC+ T + ++LINGYCK +E
Sbjct: 213 SSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVE 272
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL + ++ G +PD + YNT L + V A K+ D M ++G D +TY +
Sbjct: 273 DALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVV 332
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ LCKN + EA + + C DI +N LI L
Sbjct: 333 NCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVAL 370
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 132/293 (45%), Gaps = 13/293 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FNIL L K L LF+ + S+G PD TYN LI+ C +G++ +
Sbjct: 393 PDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDL 452
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + + VT+ ++I GLC + RI EA +F ++ + G N T+NTLI+GL +
Sbjct: 453 LKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCK 512
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
A L +M S + +G + KA ++ M DVVT
Sbjct: 513 DKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVT 572
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G C A A LL M +G++ +N ++ L + +A L M
Sbjct: 573 YGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMT 632
Query: 243 QIGVRPNAFVYNTLMDGFCL-TGRVNRAKELFVSMESMGCTHTVFSYSILING 294
++G P+AF Y + G C G + A + + M G S+ +L G
Sbjct: 633 EVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEG 685
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 129/304 (42%), Gaps = 32/304 (10%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P ++N + L K + +F +++ G+ + T+N LI+ CK R+
Sbjct: 462 PRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQ 521
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
++ +++ PN +T+ S++ C + I +AA + + G E +V TY TLINGL
Sbjct: 522 LISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLC 581
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ G T VAL L M ++K P Y VI+
Sbjct: 582 KAGRTQVALKLLRGM---------------------RIKGMRATPK--AYNPVIQSLFRR 618
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK-NGKMDEASRLLDLMIQIGVRPNAFV 252
N+ +A L EM + G P+ T+ ++ LC+ G + EA L M+ G P
Sbjct: 619 NNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSS 678
Query: 253 YNTLMDGFCLTGRVN---RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
+ L +G G + RA E+ + +G + I GY K ++ AL+ +G
Sbjct: 679 FRMLAEGLLNLGMDDYFIRAIEIIIEKADLGDSDVS-----AIRGYLKIRKFYDALATFG 733
Query: 310 EMLS 313
+L
Sbjct: 734 RLLK 737
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 195/421 (46%), Gaps = 61/421 (14%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + D L + + PD YTYN LI C GR ++ V
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAV 180
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +LR P+ VT+T L++ C S +A L ++R GC P++ TYN ++NG+ +
Sbjct: 181 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 240
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
EG VD A E + P+ V+Y V++G C A
Sbjct: 241 -----------------------EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAE 277
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG------------------------- 229
W +A+ L+ EM +G PNVVTFN+++ LC+ G
Sbjct: 278 RWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYN 337
Query: 230 ----------KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
KMD+A LDLM+ G P+ YNTL+ C +G V+ A EL ++
Sbjct: 338 PLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 397
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
GC + SY+ +I+G K + + AL L EM+SKG++PD++ Y+T+ L ++E A
Sbjct: 398 GCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDA 457
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ F ++Q G+ +T Y I GLCK A++LF + C + Y LI+G
Sbjct: 458 IRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEG 517
Query: 400 L 400
L
Sbjct: 518 L 518
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 177/381 (46%), Gaps = 24/381 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ D ML R P V ++ IL K Y + L + G PD+ TYN+++N
Sbjct: 178 LAVLDEMLRRR-CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVN 236
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C+ GRV L + PN V++ ++KGLC R +A L ++ GC P
Sbjct: 237 GICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPP 296
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
NV T+N LI+ L R +G V+ A E+ Q+ P+
Sbjct: 297 NVVTFNMLISFLCR-----------------------KGLVEPALEVLEQIPKYGCTPNS 333
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
++Y ++ FC ++A L M+ +G P++V++N ++ LC++G++D A LL
Sbjct: 334 LSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQ 393
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+ G P YNT++DG G+ A EL M S G + +YS + G C+
Sbjct: 394 LKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDR 453
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
IE A+ +G++ GI+P+ V+YN + + L + + A LF M +G + TY
Sbjct: 454 IEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTI 513
Query: 361 FIDGLCKNSYIVEAVELFRTL 381
I+GL I EA +L L
Sbjct: 514 LIEGLAYEGLIKEARDLLDEL 534
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 149/324 (45%), Gaps = 31/324 (9%)
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
R++ S P+A T +LIK L A R EA + C P+V YN ++ G G
Sbjct: 86 RLVGSARRPDAGTCAALIKKLSASGRTAEARRVLA-----ACGPDVMAYNAMVAGYCGAG 140
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+D A+ L +M + PD TY ++IRG C
Sbjct: 141 Q-----------------------LDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRT 174
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
A +L EM+ + P+VVT+ ++++ CK +A +LLD M G P+ YN +
Sbjct: 175 ANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVV 234
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
++G C GRV+ A E ++ S GC SY+I++ G C + E A L GEM KG
Sbjct: 235 VNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGC 294
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
P+VV +N L L VE A ++ +++ + G ++ +Y + CK + +A+
Sbjct: 295 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMA 354
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
+ C DI +YN L+ L
Sbjct: 355 FLDLMVSRGCYPDIVSYNTLLTAL 378
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 207/400 (51%), Gaps = 28/400 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFG--CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+F ML + SP V ++NIL C A N D L+LF ++ + G P++ TYN LI+
Sbjct: 192 VFKEMLESQVSPN-VFTYNILIRGFCFAGN--IDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+CK+ ++ GF +L + PN +++ +I GLC E R+ E + + T++ G
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
+ TYNTLI G + G+ AL + EM + P V
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLR-----------------------HGLTPSV 345
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+TYTS+I C A + N A L +M +G+ PN T+ ++D + G M+EA R+L
Sbjct: 346 ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLRE 405
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M G P+ YN L++G C+TG++ A + M+ G + V SYS +++G+C++ +
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
++ AL + EM+ KGIKPD + Y++L E + + A L++EM R G+ D +TY
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I+ C + +A++L + D+ Y+ LI+GL
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 211/426 (49%), Gaps = 28/426 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+FD M + P V ++N L K + D L + + GL P+L +YN++IN
Sbjct: 225 LTLFDKM-ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C+ GR+ VL + R ++ + VT+ +LIKG C E +A + ++ G P
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELF 168
+V TY +LI+ + + G+ A+ ++M F +G++++A +
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+M D +P VVTY ++I G C +A +L +M ++G+ P+VV+++ ++ C++
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
+DEA R+ M++ G++P+ Y++L+ GFC R A +L+ M +G F+Y
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ LIN YC ++E AL L+ EM+ KG+ PDVV Y+ L L + + A +L ++
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583
Query: 349 DGVAADTWTYRTFID---------------GLCKNSYIVEAVELFRTLRILKCELDIRAY 393
+ TY T I+ G C + EA ++F ++ + D AY
Sbjct: 584 EESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAY 643
Query: 394 NCLIDG 399
N +I G
Sbjct: 644 NIMIHG 649
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 193/386 (50%), Gaps = 24/386 (6%)
Query: 15 PPVCSFN-ILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P V S+N +L + ++ ++FK + + + P+++TYNILI FC G +
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ ++ PN VT+ +LI G C +I + L + + G EPN+ +YN +INGL
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
R EG + + + +M + D VTY ++I+G+C
Sbjct: 287 R-----------------------EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKE 323
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
++++A + EM+ G+ P+V+T+ ++ +CK G M+ A LD M G+ PN Y
Sbjct: 324 GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
TL+DGF G +N A + M G + +V +Y+ LING+C ++E A+++ +M
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE 443
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG+ PDVV Y+T+ + V+ A ++ EM G+ DT TY + I G C+ E
Sbjct: 444 KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
A +L+ + + D Y LI+
Sbjct: 504 ACDLYEEMLRVGLPPDEFTYTALINA 529
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 187/422 (44%), Gaps = 64/422 (15%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S+N++ L + V + +N G D TYN LI +CK G V+
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+LR TP+ +T+TSLI +C + A ++RV G PN TY TL++G +
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G+ A + EM NG V G ++ A + MK++ ++PDVV
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHC-VTGKMEDAIAVLEDMKEKGLSPDVV 451
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+Y++V+ GFC + D +EA + EM+++G++P+ +T++ ++ C+ + EA L + M
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY------ 295
+++G+ P+ F Y L++ +C+ G + +A +L M G V +YS+LING
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 571
Query: 296 ----------------------------CKNKEIEGALSL----------------YGEM 311
C N E + +SL + M
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM 631
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
L K KPD YN + + +A+ L+ EM + G T T + L K +
Sbjct: 632 LGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKV 691
Query: 372 VE 373
E
Sbjct: 692 NE 693
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 156/319 (48%), Gaps = 25/319 (7%)
Query: 82 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV- 140
C++ ++V F ++K S I +A ++ + G P V +YN +++ R+ I
Sbjct: 130 CYSTSSV-FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISF 188
Query: 141 ALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
A N+F+EM + ++P+V TY +IRGFC+A + + A
Sbjct: 189 AENVFKEML-----------------------ESQVSPNVFTYNILIRGFCFAGNIDVAL 225
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
L +M +G PNVVT+N ++D CK K+D+ +LL M G+ PN YN +++G
Sbjct: 226 TLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGL 285
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
C GR+ + M G + +Y+ LI GYCK AL ++ EML G+ P V
Sbjct: 286 CREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSV 345
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
+ Y +L + + + RA + D+M+ G+ + TY T +DG + Y+ EA + R
Sbjct: 346 ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLRE 405
Query: 381 LRILKCELDIRAYNCLIDG 399
+ + YN LI+G
Sbjct: 406 MNDNGFSPSVVTYNALING 424
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 135/333 (40%), Gaps = 29/333 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L + +++ + + GL PD+ +Y+ +++ FC+ V V
Sbjct: 413 PSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRV 472
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ P+ +T++SLI+G C + R EA L+ ++ G P+ FTY LIN
Sbjct: 473 KREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCM 532
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G AL L EM NG + +AK L L++ E P V
Sbjct: 533 EGDLEKALQLHNEMVEKGVLPDVVTYSVLING-LNKQSRTREAKRLLLKLFYEESVPSDV 591
Query: 182 TY---------------TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
TY S+I+GFC EA + M+ + +P+ +N+++ C
Sbjct: 592 TYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHC 651
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
+ G + +A L M++ G + L+ G+VN + V +
Sbjct: 652 RAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAE 711
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
+L+ + ++ L + EM G P+
Sbjct: 712 QAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 1/150 (0%)
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE-IEGALSLYGE 310
V++ ++ + +++A + ++ G V SY+ +++ ++K I A +++ E
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKE 195
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
ML + P+V YN L ++ A LFD+M+ G + TY T IDG CK
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I + +L R++ + E ++ +YN +I+GL
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGL 285
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 22/231 (9%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP ++ L + L L + G+ PD+ TY++LIN K R
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKR 576
Query: 74 VLGRILRSCFTPNAVTF---------------TSLIKGLCAESRIMEAAALFTKLRVFGC 118
+L ++ P+ VT+ SLIKG C + + EA +F +
Sbjct: 577 LLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNH 636
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINP 178
+P+ YN +I+G R G A L++EM + K L + K +N
Sbjct: 637 KPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNS 696
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+V V+R C ++ +AK +L+E+ + +VV ++ E+ K+G
Sbjct: 697 VIV---HVLRS-CELSEAEQAK-VLVEINHREGNMDVVL--DVLAEMAKDG 740
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 185/365 (50%), Gaps = 12/365 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L +N H L + + G PD++TYNI++NC CK G++ +
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ P+ TF +LI LC +R+ EA L ++ V G P+V+T+N LIN L +
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 403
Query: 135 TGHTIVALNLFEEMASGN---GEFGVEGFVD---------KAKELFLQMKDENINPDVVT 182
G +AL LFEEM + E +D KA +L M+ +T
Sbjct: 404 VGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTIT 463
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G C EA+ + +M QG+ N +TFN ++D LCK+ K+D+A L++ MI
Sbjct: 464 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMI 523
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G++PN YN+++ +C G + +A ++ +M + G V +Y LING CK +
Sbjct: 524 SEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQ 583
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL + M KG++P YN + LF + + A LF EM G D TY+
Sbjct: 584 VALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVF 643
Query: 363 DGLCK 367
GLC+
Sbjct: 644 RGLCR 648
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/405 (30%), Positives = 199/405 (49%), Gaps = 12/405 (2%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P V +FN L L + T + + + ++S G+ PD T+ L+ F + G
Sbjct: 172 MGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGS 231
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ V R+L + VT LI G C R+ +A + G EP+ TYNT
Sbjct: 232 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 291
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDEN 175
+NGL + H AL + + M + V G +++AK + QM D
Sbjct: 292 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
PD+ T+ ++I C N EA L ++ +GV P+V TFN++++ LCK G A
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 411
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
RL + M G P+ YNTL+D C G++ +A +L MES GC + +Y+ +I+G
Sbjct: 412 RLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGL 471
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
CK IE A ++ +M +GI + + +NTL L + +++ AF L ++M +G+ +
Sbjct: 472 CKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNN 531
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY + + CK I +A ++ T+ E+D+ Y LI+GL
Sbjct: 532 ITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 576
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 169/362 (46%), Gaps = 47/362 (12%)
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
+ V + L+ L S++ ++++++ G +P+V T+NTL+ L R A+ +
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 204
Query: 146 EEMAS--------------------GNGEFGVE--------------------------- 158
EEM+S G+ E +
Sbjct: 205 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL 264
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
G V+ A Q + PD +TY + + G C + A ++ M+ +G P+V T+
Sbjct: 265 GRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTY 324
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
N++++ LCKNG+++EA +L+ M+ G P+ +NTL+ C R+ A +L +
Sbjct: 325 NIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 384
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
G + V++++ILIN CK + AL L+ EM + G PD V YNTL L + ++ +
Sbjct: 385 KGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGK 444
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A L +M+ G T TY T IDGLCK I EA E+F + + + +N LID
Sbjct: 445 ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 504
Query: 399 GL 400
GL
Sbjct: 505 GL 506
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 138/292 (47%), Gaps = 10/292 (3%)
Query: 113 LRVFGCEPNVFTYNTLINGLYRTGHTIV--ALNLFEEMASGNGEF--GVEGFVDKAKELF 168
+R G + L+ + R GH + ++ F + G F V+ +++ + LF
Sbjct: 81 IRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLF 140
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
I D V Y ++ + + + EM +G++P+VVTFN +M LC+
Sbjct: 141 ------GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRA 194
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
++ A +L+ M GV P+ + TLM GF G + A + M MGC+ T +
Sbjct: 195 HQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTV 254
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
++LINGYCK +E AL + ++ G +PD + YNT L + V A K+ D M +
Sbjct: 255 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 314
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+G D +TY ++ LCKN + EA + + C DI +N LI L
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 133/293 (45%), Gaps = 13/293 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FNIL L K L LF+ + ++G PD TYN LI+ C +G++ +
Sbjct: 389 PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDL 448
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + + +T+ ++I GLC + RI EA +F ++ + G N T+NTLI+GL +
Sbjct: 449 LKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCK 508
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
A L +M S + +G + KA ++ M DVVT
Sbjct: 509 DKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVT 568
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G C A A +L M +G++P +N ++ L + + +A L M
Sbjct: 569 YGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMA 628
Query: 243 QIGVRPNAFVYNTLMDGFCL-TGRVNRAKELFVSMESMGCTHTVFSYSILING 294
++G P+A Y + G C G + A + + M G S+ +L G
Sbjct: 629 EVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 681
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 110/242 (45%), Gaps = 25/242 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M +++ +FN L L K+K D L ++ S GL P+ TYN ++ +
Sbjct: 483 VFDQM-DLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHY 541
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G + +L + + F + VT+ +LI GLC R A + +R+ G P
Sbjct: 542 CKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTP 601
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
YN ++ L+R + AL+LF EMA E G PD +T
Sbjct: 602 KAYNPVLQSLFRRNNIRDALSLFREMA----EVGEP-------------------PDALT 638
Query: 183 YTSVIRGFCYAN-DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y V RG C EA ++EM+D+G P +F ++ + L G D R ++++
Sbjct: 639 YKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEII 698
Query: 242 IQ 243
++
Sbjct: 699 ME 700
>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
Length = 495
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 128/403 (31%), Positives = 202/403 (50%), Gaps = 28/403 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IFD ML + P + ++ I+ L + D L L + + S L P + N+L++C
Sbjct: 59 IFDDML-YKECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCL 117
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G+V + + R+ C + + +++ L GLC +I A A+F ++ P++
Sbjct: 118 CKNGKVDAAYELYKRLSDEC-SLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSL 176
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TYN L+ G R G A+ L EEM G K ++ PD+ +
Sbjct: 177 LTYNGLLYGYCRAGRMEQAMTLLEEMIEGK-------------------KGSDVVPDMYS 217
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +VI GFC A A+ +L M+ G PNVVTFN ++D LC GK+DEA+ + + M+
Sbjct: 218 YNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMV 277
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ P A Y L+ G R+++A + FV M G V++Y+ LI G C ++E
Sbjct: 278 ERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVE 337
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA---ADTWTYR 359
AL + M S G +P+VV Y + L + Q+ERA KLF++ A D++ Y
Sbjct: 338 DALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYS 397
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRA--YNCLIDGL 400
T + LC+ S +EA E F LR+++ +L + Y + DGL
Sbjct: 398 TIVYWLCRQSKFLEAYEYF--LRMVESKLVAKPHIYKAMADGL 438
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 177/364 (48%), Gaps = 18/364 (4%)
Query: 52 LYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 111
++TYN +N K G S + +L PN T+ +++GLC +++ A L
Sbjct: 37 VFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQ 96
Query: 112 KLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG---------EFGV--EGF 160
+ P F N L++ L + G A L++ ++ +G+
Sbjct: 97 DMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSLDRISYNMLTYGLCKADQ 156
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD----QGVQPNVV 216
+D+A +F +M++ + P ++TY ++ G+C A +A LL EM++ V P++
Sbjct: 157 IDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMY 216
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
++N ++ CK ++ A +L MI+ G PN +NTL+DG CLTG+++ A +F M
Sbjct: 217 SYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYM 276
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
C T +Y++LI G+ + I+ A + +ML +G++P+V Y L L + ++V
Sbjct: 277 VERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKV 336
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL---RILKCELDIRAY 393
E A ++ M G + TY I LCK I A +LF R KC+ D AY
Sbjct: 337 EDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYAY 396
Query: 394 NCLI 397
+ ++
Sbjct: 397 STIV 400
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 154/340 (45%), Gaps = 30/340 (8%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S+N+L L K D L++F + + P L TYN L+ +C+ GR+ +L +
Sbjct: 143 SYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEM 202
Query: 79 LR----SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ S P+ ++ ++I G C ++ A + ++ GC PNV T+NTL++GL
Sbjct: 203 IEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCL 262
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
TG +D+A +F M + N P VTYT +I G A
Sbjct: 263 TGK-----------------------LDEANAMFEYMVERNCEPTAVTYTVLITGHARAL 299
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
++A ++M+ +GV+PNV T+ ++ LC K+++A +L M G PN Y
Sbjct: 300 RIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYT 359
Query: 255 TLMDGFCLTGRVNRAKELF---VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
++ C G++ RA +LF + + C ++YS ++ C+ + A + M
Sbjct: 360 RVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIVYWLCRQSKFLEAYEYFLRM 419
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
+ + IY + L + + E+ ++ E G+
Sbjct: 420 VESKLVAKPHIYKAMADGLELVQETEKVERVCLEASAHGI 459
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 138/310 (44%), Gaps = 33/310 (10%)
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG 153
IK SR+ + AA R + VFTYN +N L + GH
Sbjct: 14 IKSPKLASRVFKWAA-----RQEDFQHTVFTYNAYLNALVKGGHG--------------- 53
Query: 154 EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
KA+++F M + P++ TY V+RG C + A LL +M + + P
Sbjct: 54 --------SKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTP 105
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
N+++ LCKNGK+D A L + + YN L G C +++RA +F
Sbjct: 106 TTFIVNMLVSCLCKNGKVDAAYELYKRLSD-ECSLDRISYNMLTYGLCKADQIDRALAVF 164
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML--SKG--IKPDVVIYNTLFVV 329
ME ++ +Y+ L+ GYC+ +E A++L EM+ KG + PD+ YNT+
Sbjct: 165 GEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISG 224
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
+ Q+ A + M + G + + T+ T +DGLC + EA +F + CE
Sbjct: 225 FCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPT 284
Query: 390 IRAYNCLIDG 399
Y LI G
Sbjct: 285 AVTYTVLITG 294
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 115/233 (49%), Gaps = 5/233 (2%)
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ E+ V TY + + ++A+ + +M+ + PN+ T+ +++ LC + K
Sbjct: 29 RQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKT 88
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
D A LL M + P F+ N L+ C G+V+ A EL+ + S C+ SY++L
Sbjct: 89 DAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRL-SDECSLDRISYNML 147
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM----Q 347
G CK +I+ AL+++GEM + P ++ YN L ++E+A L +EM +
Sbjct: 148 TYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKK 207
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
V D ++Y T I G CK + A + R + C ++ +N L+DGL
Sbjct: 208 GSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGL 260
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 189/362 (52%), Gaps = 12/362 (3%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
PD++ YN LIN FCKM R+ VL R+ F+P+ VT+ +I LC+ ++ A +
Sbjct: 152 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 211
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------ 157
+L C+P V TY LI G AL L +EM S + +
Sbjct: 212 LDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCK 271
Query: 158 EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
EG VD+A E+ ++ + PDV++Y ++R W E + L+ +M + PNVVT
Sbjct: 272 EGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 331
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
+++++ LC++GK++EA LL LM + G+ P+A+ Y+ L+ FC GR++ A E +M
Sbjct: 332 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 391
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
S GC + +Y+ ++ CKN + + AL ++G++ G P+ YNT+F L+
Sbjct: 392 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 451
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
RA + EM +G+ D TY + I LC+ + +A EL +R + + YN ++
Sbjct: 452 RALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVL 511
Query: 398 DG 399
G
Sbjct: 512 LG 513
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 180/391 (46%), Gaps = 13/391 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M + SP V ++NI+ G L D L + +L S P + TY ILI
Sbjct: 176 VLDRMRSKDFSPDTV-TYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEAT 234
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
G V +L +L P+ T+ ++I+G+C E + A + L + GCEP+V
Sbjct: 235 MLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDV 294
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
+YN L+ L G L +M S + V +G +++A L
Sbjct: 295 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 354
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
MK++ + PD +Y +I FC + A L M+ G P++V +N ++ LCKNGK
Sbjct: 355 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 414
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
D+A + + ++G PN+ YNT+ +G RA + + M S G +Y+
Sbjct: 415 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNS 474
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+I+ C+ ++ A L +M S P VV YN + + + H++E A + D M +G
Sbjct: 475 MISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNG 534
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+ TY I+G+ Y EA+EL L
Sbjct: 535 CRPNETTYTVLIEGIGFAGYRAEAMELANDL 565
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 164/350 (46%), Gaps = 13/350 (3%)
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ G +L ++R + P+ + T LIKG + +A + L FG +P+V
Sbjct: 96 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDV 154
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
F YN LING + A + + M S + G G +D A ++ Q
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ +N P V+TYT +I +EA LL EM+ +G++P++ T+N I+ +CK G
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+D A ++ + G P+ YN L+ G+ ++L M S C V +YSI
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 334
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI C++ +IE A++L M KG+ PD Y+ L +++ A + + M DG
Sbjct: 335 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 394
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D Y T + LCKN +A+E+F L + C + +YN + L
Sbjct: 395 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 444
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 135/271 (49%), Gaps = 13/271 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++IL L ++ + ++L K + GL PD Y+Y+ LI FC+ GR+
Sbjct: 327 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 386
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+ V + +++ LC + +A +F KL GC PN +YNT+ + L+
Sbjct: 387 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 446
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
+G I AL++ EM S + EG VDKA EL + M+ +P VVT
Sbjct: 447 SGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVT 506
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y V+ GFC A+ +A +L M+ G +PN T+ V+++ + G EA L + ++
Sbjct: 507 YNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 566
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
+I + + + L F L + R+ + F
Sbjct: 567 RINA-ISEYSFKRLHRTFPLLNVLQRSSQTF 596
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 131/406 (32%), Positives = 208/406 (51%), Gaps = 20/406 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG--LFPDLYTYNILINCFCKMGRVSHGF 72
P V S+N L L K + + L + + S G PDL TY+ L++ +CK G+V
Sbjct: 43 PNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESR 102
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+L ++ P+A+ +T ++ LC +R+ EA L ++ GC P + T+NTLI+G
Sbjct: 103 ELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGC 162
Query: 133 YRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDV 180
R + +A +L + MA+ + V G + +A++L +MK PDV
Sbjct: 163 CREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDV 222
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
V Y+S + G C + A +L +M D PNVVT+N I+D LCK+GK+D A +++
Sbjct: 223 VAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQ 282
Query: 241 MIQI-GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M G N Y+T++DG C GR A+ + +M GC V +YS L+NG CK
Sbjct: 283 MASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAG 342
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR-----DGVAAD 354
+IE A+ EM +G KP+ V Y +L L ++ A ++ +EM D
Sbjct: 343 KIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPS 402
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY I GLCK I +A++ F+ +R C+ D +Y+ +++GL
Sbjct: 403 VSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGL 448
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 184/373 (49%), Gaps = 15/373 (4%)
Query: 43 LNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 102
++ TG P+ T+N L+N F K GR +L + PN V++ L++GLC R
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 103 IMEAAALFTKLRVFG--CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN-------- 152
EA L + G P++ TY+TL++G + G + L +E+ S
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 153 ----GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD 208
+ +A EL +M P ++T+ ++I G C + A LL M
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
GV+ +VVT+N +MD LCK G++ EA +LL+ M G P+ Y++ + G C +G+V
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK-GIKPDVVIYNTLF 327
A ++ M V +Y+ +++G CK+ +I+ AL + +M S G +VV Y+T+
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
L ++ + + A + + M R G D TY + ++GLCK I EAVE R + + C+
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360
Query: 388 LDIRAYNCLIDGL 400
+ Y L+ GL
Sbjct: 361 PNAVTYCSLVHGL 373
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 109/221 (49%), Gaps = 19/221 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNST-GLFPDLYTYNILINCFCKMGRVSHGFV 73
P V ++N + L K+ DT L + +++ S+ G ++ Y+ +++ CK+GR
Sbjct: 255 PNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARS 314
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
V+ + R+ P+ VT++SL+ GLC +I EA ++ + GC+PN TY +L++GL
Sbjct: 315 VMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLC 374
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
G A + EEM+ ++ P V TY ++I G C A
Sbjct: 375 SCGRLAEAERMVEEMS------------------SGGGGGDHCPPSVSTYNALIGGLCKA 416
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
++A M QG P+ V+++ I++ L ++G+ +A
Sbjct: 417 GRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/405 (31%), Positives = 203/405 (50%), Gaps = 14/405 (3%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P V +N+L G L + K +F + + L + TYN LI+ +CK+G
Sbjct: 202 MRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGE 261
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ F + R+ PN +TF SL+ GLC ++ EA +L ++ V G P+ +TY+
Sbjct: 262 LDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSI 321
Query: 128 LINGLYRTGHTIVALNLFEEMASG----NGEFGV--------EGFVDKAKELFLQMKDEN 175
L +GL R A+ L+E+ N G +G V+KA+E+ + +
Sbjct: 322 LFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENG 381
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEA 234
+ D V Y + + G+C D N+A L IE M+ G++PN +TFN ++D+ C +MD+A
Sbjct: 382 LVADEVIYNTFVNGYCRIGDMNKA-ILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKA 440
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+ M + GV P+ YNTL+DG+ +R ++ ME +G V SY LIN
Sbjct: 441 EEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINC 500
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
CK+ +I A + +M+ +G+ P+ +YN L + +V+ A + FDEM R ++
Sbjct: 501 LCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPT 560
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
TY IDGLCK + EA + + D+ YN LI G
Sbjct: 561 LVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISG 605
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 190/403 (47%), Gaps = 29/403 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +FN L L K + SL K + G PD YTY+IL + + + +
Sbjct: 279 PNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMEL 338
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ N T + L+ GLC + ++ +A + K G + YNT +NG R
Sbjct: 339 YEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCR 398
Query: 135 TGHTIVALNLFEEMASGNGEFG-----------VEGF-----VDKAKELFLQMKDENINP 178
G A+ E M S FG ++ F +DKA+E +M ++ + P
Sbjct: 399 IGDMNKAILTIERMES----FGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTP 454
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
V TY ++I G+ ++ +L +M + GV+PNVV++ +++ LCK+GK+ EA +L
Sbjct: 455 SVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVL 514
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
MI GV PNA VYN L+DG C+ G+V A F M + T+ +Y++LI+G CK
Sbjct: 515 RDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKK 574
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
++ A ++ S G PDV+ YN+L V + L++ M+ G+ TY
Sbjct: 575 GKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTY 634
Query: 359 RTFIDGLCKNSYIVEAVELFRTL--RILKCEL--DIRAYNCLI 397
I G K E +EL L +L+ L D YN +I
Sbjct: 635 HPLISGCSK-----EGIELVEKLYNEMLQMNLLPDRVVYNAMI 672
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 179/395 (45%), Gaps = 21/395 (5%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
+IL L K + + K+ GL D YN +N +C++G ++ + + R+
Sbjct: 355 SILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMES 414
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
PN++TF SLI C + +A K+ G P+V TYNTLI+G +
Sbjct: 415 FGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDR 474
Query: 141 ALNLFEEMASGNGEFGV----------------EGFVDKAKELFLQMKDENINPDVVTYT 184
+ E+M E GV +G + +A+ + M + P+ Y
Sbjct: 475 CFQILEQME----EIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYN 530
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+I G C +A EMM + P +VT+NV++D LCK GK+ EA L +
Sbjct: 531 MLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSS 590
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G P+ YN+L+ G+ G V++ L+ +M+++G TV +Y LI+G C + IE
Sbjct: 591 GHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISG-CSKEGIELV 649
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
LY EML + PD V+YN + EI ++A+ L M G+ D TY + I G
Sbjct: 650 EKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILG 709
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + +L ++ + Y+ L+ G
Sbjct: 710 HFREGKLSNIKDLVNNMKAKELAPKADTYDILVKG 744
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 185/381 (48%), Gaps = 12/381 (3%)
Query: 31 KHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTF 90
K + V+ LF + ++G D + Y I K+ + G L + + PN +
Sbjct: 155 KQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIY 214
Query: 91 TSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS 150
LI GLC E RI +A +F ++ ++ TYNTLI+G + G A + E M
Sbjct: 215 NVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKE 274
Query: 151 GNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+ + F + +A+ L +M+ PD TY+ + G +D N
Sbjct: 275 KSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNG 334
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A L + ++G++ N T +++++ LCK GK+++A +L + G+ + +YNT ++
Sbjct: 335 AMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVN 394
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G+C G +N+A MES G +++ LI+ +C KE++ A +M KG+ P
Sbjct: 395 GYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTP 454
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
V YNTL ++ +R F++ ++M+ GV + +Y + I+ LCK+ I+EA +
Sbjct: 455 SVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVL 514
Query: 379 RTLRILKCELDIRAYNCLIDG 399
R + + + YN LIDG
Sbjct: 515 RDMICRGVLPNAQVYNMLIDG 535
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 157/353 (44%), Gaps = 25/353 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+ L CL K+ + + + G+ P+ YN+LI+ C +G+V
Sbjct: 489 PNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRF 548
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++RS +P VT+ LI GLC + ++ EA T++ G P+V TYN+LI+G
Sbjct: 549 FDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYAN 608
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G+ L L+E MK+ I P V TY +I G C
Sbjct: 609 AGNVSKCLGLYE-----------------------TMKNLGIKPTVRTYHPLISG-CSKE 644
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ L EM+ + P+ V +N ++ + G +A L M+ G+ P+ YN
Sbjct: 645 GIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYN 704
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L+ G G+++ K+L +M++ +Y IL+ G+C K+ GA Y EM+
Sbjct: 705 SLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVEN 764
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
P+ I N L L + +++ + EM G+ + W + I + K
Sbjct: 765 NFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKGI-INHWPSKEEISAVAK 816
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 189/368 (51%), Gaps = 23/368 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N + L K KH D L+LFK + + G+ P++ TY+ LI+C C GR S +
Sbjct: 49 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 108
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+ TF++LI E +++EA L+ ++ +P++ TY++LING
Sbjct: 109 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING--- 165
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
F + +D+AK++F M ++ PDVVTY ++I+GFC
Sbjct: 166 --------------------FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 205
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
E + EM +G+ N VT+N+++ L + G D A + M+ GV PN YN
Sbjct: 206 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 265
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+DG C G++ +A +F ++ T+++Y+I+I G CK ++E L+ + K
Sbjct: 266 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 325
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+KPDVV YNT+ E A LF EM+ DG ++ Y T I ++ +
Sbjct: 326 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 385
Query: 375 VELFRTLR 382
EL + +R
Sbjct: 386 AELIKEMR 393
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 178/305 (58%), Gaps = 12/305 (3%)
Query: 108 ALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV-------EGF 160
AL ++ GC+P++ TY ++NGL + G T +A NL +M G E GV +G
Sbjct: 2 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 61
Query: 161 -----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNV 215
+D A LF +M+ + I P+VVTY+S+I C W++A LL +M+++ + P+V
Sbjct: 62 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 121
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
TF+ ++D K GK+ EA +L D M++ + P+ Y++L++GFC+ R++ AK++F
Sbjct: 122 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 181
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
M S C V +Y+ LI G+CK K +E + ++ EM +G+ + V YN L LF+
Sbjct: 182 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 241
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
+ A ++F EM DGV + TY T +DGLCKN + +A+ +F L+ K E I YN
Sbjct: 242 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 301
Query: 396 LIDGL 400
+I+G+
Sbjct: 302 MIEGM 306
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 184/363 (50%), Gaps = 23/363 (6%)
Query: 37 LSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 96
++L R+ + G PDL TY +++N CK G F +L ++ + P + + ++I G
Sbjct: 1 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG 156
LC + +A LF ++ G PNV TY++LI+ L G
Sbjct: 61 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW------------------ 102
Query: 157 VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
A L M + INPDV T++++I F EA+ L EM+ + + P++V
Sbjct: 103 -----SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 157
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
T++ +++ C + ++DEA ++ + M+ P+ YNTL+ GFC RV E+F M
Sbjct: 158 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 217
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
G +Y+ILI G + + + A ++ EM+S G+ P+++ YNTL L + ++
Sbjct: 218 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 277
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
E+A +F+ +QR + +TY I+G+CK + + +LF L + + D+ AYN +
Sbjct: 278 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 337
Query: 397 IDG 399
I G
Sbjct: 338 ISG 340
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 131/296 (44%), Gaps = 14/296 (4%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V +F+ L K L+ + + P + TY+ LIN FC R+
Sbjct: 115 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 174
Query: 71 GFVVLG-RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
+ + + CF P+ VT+ +LIKG C R+ E +F ++ G N TYN LI
Sbjct: 175 AKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 233
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENIN 177
GL++ G +A +F+EM S + G ++KA +F ++ +
Sbjct: 234 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 293
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P + TY +I G C A + L + +GV+P+VV +N ++ C+ G +EA L
Sbjct: 294 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 353
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
M + G PN+ YNTL+ G + EL M S G + ++ N
Sbjct: 354 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 409
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/391 (32%), Positives = 197/391 (50%), Gaps = 12/391 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S+N L LAK+ D V + + + G P+ YTY L+ C+ R V +
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+PN +++ LI GLC ++ EAA L ++ G +PNV TY +L++GL + G
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 139 IVALNLFEEMA-SGNGEFGV------EGFVDK-----AKELFLQMKDENINPDVVTYTSV 186
A++LF M G GV +GF K A LF +M ++ P V TY S+
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
+ GF ++ + L +M+ QG PN+ TFN ++D CK G M EA RL M +G
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+ YNTL+ G C G+ + A+ L M G + SY+ILI+GY K+ ++ A+
Sbjct: 259 PPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIK 318
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L+ E+ G++PD Y+T+ L +V AF +F +M +G A D + GLC
Sbjct: 319 LFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLC 378
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ + E+ ELF+ + +C I YN L+
Sbjct: 379 RGERLTESCELFQAMVKFECVPLIPEYNLLM 409
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 171/347 (49%), Gaps = 23/347 (6%)
Query: 54 TYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL 113
+YN L+ K GR H + +L + PN T+ L++ LC R EA ++F +
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 114 RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKD 173
GC PNVF+Y+ LI GL R VD+A EL +M D
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQK-----------------------VDEAAELLNEMID 115
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
P+VVTY S++ G C EA L M+ +G P+ V +NV++D K G M E
Sbjct: 116 GGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGE 175
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A RL + M++ G P F YN+L+ GF G R + LF M GC +F+++ L++
Sbjct: 176 AYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLD 235
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
G+CK ++ A L+ EM S G PDVV YNTL + + A +L EM R GV
Sbjct: 236 GFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGP 295
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D +Y IDG K+ + A++LF + E D +Y+ +ID L
Sbjct: 296 DIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCL 342
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 188/398 (47%), Gaps = 47/398 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ L L + + ++ S+F+ + + G P++++Y+ILI C+ +V +
Sbjct: 50 PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAEL 109
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ PN VT+ SL+ GLC ++ EA LF+++ GC P+ YN LI+G +
Sbjct: 110 LNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSK 169
Query: 135 TGHTIVALNLFEEMA------------------SGNGEFG-------------------- 156
G A LFEEM S GEFG
Sbjct: 170 KGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFT 229
Query: 157 ----VEGFVD-----KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
++GF +A LFL+M+ PDVV+Y ++IRG C +EA+ LL EM+
Sbjct: 230 FNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMI 289
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
GV P++V++N+++D K+G +D A +L + + G+ P+AF Y+T++D C G+V
Sbjct: 290 RSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVG 349
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A +F M + G L+ G C+ + + + L+ M+ P + YN L
Sbjct: 350 AAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLM 409
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
L + + + ++F E+ G + D + ++ L
Sbjct: 410 YKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 146/320 (45%), Gaps = 23/320 (7%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP +N+L +K LF+ + G P ++TYN L++ F + G
Sbjct: 151 RGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGR 210
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ +LR PN TF +L+ G C ++EA LF ++R GC P+V +YNTLI
Sbjct: 211 VQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIR 270
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
G+ G +A+ L +M + PD+V+Y +I G+
Sbjct: 271 GMCSKGKP-----------------------HEAQRLLREMIRSGVGPDIVSYNILIDGY 307
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
+ + A L E+ G++P+ +++ I+D LC+ GK+ A + MI G P+A
Sbjct: 308 SKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDA 367
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
V L+ G C R+ + ELF +M C + Y++L+ CK K + ++ E
Sbjct: 368 AVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHE 427
Query: 311 MLSKGIKPDVVIYNTLFVVL 330
+ +G PDV I + L
Sbjct: 428 LTERGFSPDVEISKVILETL 447
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 75/157 (47%)
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q+ YN L++ +GR + + M + GC ++Y L+ C+ + E
Sbjct: 10 QVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFE 69
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A S++ M ++G P+V Y+ L L +V+ A +L +EM G + TY + +
Sbjct: 70 EARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLL 129
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
GLCK + EAV+LF + C D YN LIDG
Sbjct: 130 SGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDG 166
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/391 (32%), Positives = 204/391 (52%), Gaps = 27/391 (6%)
Query: 36 VLSLFKRLN-----STGLFPDLYTYNILI---------NCFCKMGRVSHGFVVLGRILRS 81
+L FKRL + LF L+++ ILI C K +S + +IL++
Sbjct: 199 ILWDFKRLFLKDFLQSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTP-PKILKN 257
Query: 82 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVA 141
+ P+ +T T+ IKG C + +I +A K+ G + +Y TLINGL + G T A
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAA 317
Query: 142 LNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRG 189
L L + V + V+ A +L+ + + I PDV TY ++I G
Sbjct: 318 LELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISG 377
Query: 190 FCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
FC +A L +M + + P+V TF++++D CK+G + EA +L +M++ ++P+
Sbjct: 378 FCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPD 437
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
Y++LMDG+CL VN+A+ +F +M G T V SY+I+ING+CK K ++ A+ L+
Sbjct: 438 VVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFK 497
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
EM K I PDV+ Y++L L + ++ A +L DEM G D TY + +D LCK
Sbjct: 498 EMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKH 557
Query: 370 YIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++ +A+ L L+ D+ Y L+ GL
Sbjct: 558 HVDKAITLLTKLKGQGIRPDMNTYTILVKGL 588
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 187/370 (50%), Gaps = 12/370 (3%)
Query: 42 RLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAES 101
++ G PD T I FC G++ +++ F + V++ +LI GLC
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312
Query: 102 RIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN--------- 152
A L + +P+V YNT+I+G+ + H A +L+ E S
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYN 372
Query: 153 ---GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
F + G + A +LF +M +NI PDV T++ ++ GFC + EAK +L MM Q
Sbjct: 373 ALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQ 432
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
++P+VVT++ +MD C ++++A + + M GV N YN +++GFC V+ A
Sbjct: 433 SIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEA 492
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
+LF M V +YS LI+G CK+ I AL L EM +G +PD++ YN++
Sbjct: 493 MKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDA 552
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
L + H V++A L +++ G+ D TY + GLC++ + +A ++F L + LD
Sbjct: 553 LCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLD 612
Query: 390 IRAYNCLIDG 399
+ AY +I G
Sbjct: 613 VYAYTVMIQG 622
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 195/390 (50%), Gaps = 20/390 (5%)
Query: 26 CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTP 85
CL H L ++ + G D +Y LIN CK+G +L R P
Sbjct: 274 CLKGQIH--QALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQP 331
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKL---RVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
+ V + ++I G+C + + +A L+++ R+F P+VFTYN LI+G G A+
Sbjct: 332 DVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIF---PDVFTYNALISGFCIVGKLKDAI 388
Query: 143 NLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
+LF +M S N F +G + +AK + M ++I PDVVTY+S++ G+
Sbjct: 389 DLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGY 448
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C N+ N+A+ + M +GV NV ++N++++ CK +DEA +L M + P+
Sbjct: 449 CLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDV 508
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
Y++L+DG C +GR++ A EL M G + +Y+ +++ CK ++ A++L +
Sbjct: 509 ITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTK 568
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
+ +GI+PD+ Y L L + ++E A K+F+++ G D + Y I G C
Sbjct: 569 LKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGL 628
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
EA+ L + C D + Y +I L
Sbjct: 629 FDEALALLSKMEENGCIPDAKTYEIIILSL 658
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 181/349 (51%), Gaps = 12/349 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N + + K+KH + L+ S +FPD++TYN LI+ FC +G++ +
Sbjct: 331 PDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDL 390
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ P+ TF+ L+ G C + I EA + + +P+V TY++L++G
Sbjct: 391 FNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCL 450
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
A ++F M+ V+ + VD+A +LF +M + I PDV+T
Sbjct: 451 VNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVIT 510
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+S+I G C + + A L+ EM +G QP+++T+N I+D LCK +D+A LL +
Sbjct: 511 YSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLK 570
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+RP+ Y L+ G C +G++ A+++F + G V++Y+++I G+C +
Sbjct: 571 GQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFD 630
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
AL+L +M G PD Y + + LFE + + A KL EM G+
Sbjct: 631 EALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGL 679
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 119/251 (47%), Gaps = 23/251 (9%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ + P V +++ L + S+F ++ G+ ++ +YNI+IN FCK+
Sbjct: 428 MMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIK 487
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
V + + P+ +T++SLI GLC RI A L ++ G +P++ TYN
Sbjct: 488 MVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYN 547
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
++++ L + H VDKA L ++K + I PD+ TYT +
Sbjct: 548 SILDALCKKHH-----------------------VDKAITLLTKLKGQGIRPDMNTYTIL 584
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
++G C + +A+ + +++ +G +V + V++ C G DEA LL M + G
Sbjct: 585 VKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGC 644
Query: 247 RPNAFVYNTLM 257
P+A Y ++
Sbjct: 645 IPDAKTYEIII 655
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 68/141 (48%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
++ R P + ++N + L K H D ++L +L G+ PD+ TY IL+ C+ G+
Sbjct: 534 MHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGK 593
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ V +L + + +T +I+G C + EA AL +K+ GC P+ TY
Sbjct: 594 LEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEI 653
Query: 128 LINGLYRTGHTIVALNLFEEM 148
+I L+ +A L EM
Sbjct: 654 IILSLFEKDENDMAEKLLREM 674
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 201/410 (49%), Gaps = 16/410 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D ML R P V ++ +L + K+ + + + + + G P++ TYN++IN
Sbjct: 159 LLDDMLR-RECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGM 217
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ RV +L R+ F P+ V++T+++KGLCA R + LF ++ C PN
Sbjct: 218 CREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNE 277
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
T++ L+ R G A+ + + M+ +G VD A E
Sbjct: 278 VTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNN 337
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M +PD ++YT+V++G C A W +AK LL EM+ + PN VTFN + LC+ G
Sbjct: 338 MGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGL 397
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+D+A L++ M + G YN L++GFC+ GRV+ A ELF S+ C +Y+
Sbjct: 398 IDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELF---NSLPCEPNTITYTT 454
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L+ G C + ++ A L EM+ +VV +N L + VE A +L +M G
Sbjct: 455 LLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHG 514
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ T+ T +DG+ ++ EA+EL L LD Y+ ++D L
Sbjct: 515 CTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVL 564
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 187/388 (48%), Gaps = 29/388 (7%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
+P V ++N L + D L + S + PD YTY LI C GRV
Sbjct: 101 APVDVFAYNTLVAGYCRYGRLDAARRL---IASMPVPPDAYTYTPLIRGLCDRGRVGDAL 157
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+L +LR P+ VT+T L++ +C S +A + ++R GC PN+ TYN +ING+
Sbjct: 158 SLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGM 217
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
R E VD A+++ ++ PD V+YT+V++G C
Sbjct: 218 CR-----------------------EDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCA 254
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
A W + + L EM++ PN VTF++++ C+ G ++ A +LD M + G N +
Sbjct: 255 AKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTL 314
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
N +++ C GRV+ A E +M S GC+ SY+ ++ G C+ E A L EM+
Sbjct: 315 CNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMV 374
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
K P+ V +NT +L + +++A L ++M G + TY ++G C +
Sbjct: 375 RKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVD 434
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
A+ELF + L CE + Y L+ GL
Sbjct: 435 SALELFNS---LPCEPNTITYTTLLTGL 459
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 181/373 (48%), Gaps = 17/373 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F++L + + + + R++ G + NI+IN CK GRV F
Sbjct: 275 PNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEF 334
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + +P+ +++T+++KGLC R +A L ++ C PN T+NT I L +
Sbjct: 335 LNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQ 394
Query: 135 TGHTIVALNLFEEM-------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G A+ L E+M A NG F V+G VD A ELF + E P+ +
Sbjct: 395 KGLIDQAILLIEQMPEYGCSVGIVTYNALVNG-FCVQGRVDSALELFNSLPCE---PNTI 450
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT+++ G C+A + A LL EMM NVVTFNV++ C+ G ++EA L+ M
Sbjct: 451 TYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQM 510
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++ G PN +NTL+DG A EL + S G + +YS +++ + I
Sbjct: 511 MEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRI 570
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A+ ++ + G++P V+YN + L + + +RA F M + + TY
Sbjct: 571 EEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVIL 630
Query: 362 IDGLCKNSYIVEA 374
I+GL + + EA
Sbjct: 631 IEGLAREGLLKEA 643
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 154/360 (42%), Gaps = 44/360 (12%)
Query: 84 TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALN 143
P+ T LI+ LC R +AA + G +VF YNTL+ G R G A
Sbjct: 67 APDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARR 126
Query: 144 LFEEMASGNGEFG----VEGFVDKAK-----ELFLQMKDENINPDVVTYTSVIRGFCYAN 194
L M + + G D+ + L M P VVTYT ++ C ++
Sbjct: 127 LIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSS 186
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ +A +L EM +G PN+VT+NVI++ +C+ ++D+A ++L+ + G +P+ Y
Sbjct: 187 GFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYT 246
Query: 255 TLMDG-----------------------------------FCLTGRVNRAKELFVSMESM 279
T++ G FC G V RA E+ M
Sbjct: 247 TVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEH 306
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
GCT +I+IN CK ++ A M S G PD + Y T+ L + E A
Sbjct: 307 GCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDA 366
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+L +EM R + T+ TFI LC+ I +A+ L + C + I YN L++G
Sbjct: 367 KELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNG 426
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 153/344 (44%), Gaps = 9/344 (2%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
NI+ + K D + S G PD +Y ++ C+ GR +L ++R
Sbjct: 316 NIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVR 375
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
PN VTF + I LC + I +A L ++ +GC + TYN L+NG G
Sbjct: 376 KNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDS 435
Query: 141 ALNLFEEMASGNGEFGVEGFV---------DKAKELFLQMKDENINPDVVTYTSVIRGFC 191
AL LF + + D A EL +M + +VVT+ ++ FC
Sbjct: 436 ALELFNSLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFC 495
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
EA L+ +MM+ G PN++TFN ++D + ++ +EA LL ++ G+ +
Sbjct: 496 QKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTI 555
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
Y++++D R+ A ++F +++ MG Y+ +++ CK E + A+ + M
Sbjct: 556 TYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHM 615
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
+S P+ Y L L ++ A + E+ GV + +
Sbjct: 616 VSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGVLSKS 659
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 151/327 (46%), Gaps = 17/327 (5%)
Query: 4 FDYMLNMRP--SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
F+++ NM P S+ + L + ++ L + P+ T+N I
Sbjct: 332 FEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICI 391
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
C+ G + +++ ++ + VT+ +L+ G C + R+ A LF L CEPN
Sbjct: 392 LCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL---PCEPN 448
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFL 169
TY TL+ GL A L EM + V +GFV++A EL
Sbjct: 449 TITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQ 508
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
QM + P+++T+ +++ G + EA LL ++ +G+ + +T++ I+D L +
Sbjct: 509 QMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSRED 568
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+++EA ++ + +G+RP A +YN ++ C +RA + F M S C +Y
Sbjct: 569 RIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYV 628
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGI 316
ILI G + ++ A + E+ S+G+
Sbjct: 629 ILIEGLAREGLLKEARYVLSELCSRGV 655
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 3/217 (1%)
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
+S +R +D EA L+ +G P+V ++ LC+ G+ +A+R+L
Sbjct: 39 SSRLRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEG 98
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G + F YNTL+ G+C GR++ A+ L SM ++Y+ LI G C +
Sbjct: 99 SGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGD 155
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
ALSL +ML + +P VV Y L + + +A K+ DEM+ G + TY I+
Sbjct: 156 ALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIIN 215
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G+C+ + +A ++ L + D +Y ++ GL
Sbjct: 216 GMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGL 252
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/405 (31%), Positives = 198/405 (48%), Gaps = 20/405 (4%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P C++N L L K ++ D +L S+G PD+ TY+IL + CK GR+
Sbjct: 74 RNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDE 133
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
F ++ + + TPN VT+ +LI GLC S+ +A L L G P+V TY +++
Sbjct: 134 AFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVD 193
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINP 178
GL + G AL + E M V G VD+A +F +M ++
Sbjct: 194 GLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTA 253
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ--PNVVTFNVIMDELCKNGKMDEASR 236
D + Y S++ G+C ++ EA+ ++ G++ P + +N +MD CK G++DE
Sbjct: 254 DALAYVSLVNGYCKSSRTKEAQKVV-----DGIRGTPYIDVYNALMDGYCKEGRLDEIPN 308
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+ + M G PN YN +MDG C G+V+ A SM S GC V SY+I+I+G
Sbjct: 309 VFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLF 368
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K + + A + +M+ GI PD V YNTL + + + A + M + GV D
Sbjct: 369 KASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNV 428
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI-RAYNCLIDGL 400
TY T I GL + + + +A EL + C + YN +ID L
Sbjct: 429 TYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRL 473
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 195/395 (49%), Gaps = 30/395 (7%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+N R P V ++NIL L K D + + G+ PD T+N +++ CK G+
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+L + P+ T+ +LI GLC + + A L + G P+V TY+
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
L +GL + G A L +EM SGNG P++VTY ++I
Sbjct: 121 LADGLCKRGRIDEAFELVKEM-SGNG----------------------CTPNLVTYNTLI 157
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
G C A+ +A LL ++ G P+VVT+ +I+D LCK G++D+A ++++ M++ G
Sbjct: 158 DGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCT 217
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P+ Y LM+G C TGRV+ A +F M S CT +Y L+NGYCK+ + A
Sbjct: 218 PSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEA--- 274
Query: 308 YGEMLSKGIK--PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
+ + GI+ P + +YN L + +++ +F++M G + TY +DGL
Sbjct: 275 --QKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGL 332
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
CK+ + EA ++ C D+ +YN +IDGL
Sbjct: 333 CKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGL 367
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 124/404 (30%), Positives = 194/404 (48%), Gaps = 19/404 (4%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P +FN + L K ++ SL + P TYN LI+ CK V
Sbjct: 39 RGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDR 98
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
++ + S F P+ VT++ L GLC RI EA L ++ GC PN+ TYNTLI+
Sbjct: 99 AKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLID 158
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINP 178
GL + T A L E + S V EG +DKA ++ M P
Sbjct: 159 GLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTP 218
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
V+TYT+++ G C +EA + EM+ + + + + +++ CK+ + EA +++
Sbjct: 219 SVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVV 278
Query: 239 DLMIQIGVR--PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
D G+R P VYN LMDG+C GR++ +F M GC + +Y+I+++G C
Sbjct: 279 D-----GIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLC 333
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K+ +++ A M S G PDVV YN + LF+ + + A ++ D+M + G+ D
Sbjct: 334 KHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAV 393
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY T + CK +AV + + + + D YN LI GL
Sbjct: 394 TYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGL 437
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 191/380 (50%), Gaps = 26/380 (6%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P + ++NI+ L K+ D + ++S G PD+ +YNI+I+ K +
Sbjct: 316 RGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKE 375
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
VL +++++ P+AVT+ +L+ C E R +A + + G +P+ TYNTLI+
Sbjct: 376 ARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLIS 435
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
GL +T A L EM +++ + TY ++I
Sbjct: 436 GLSQTNRLGDAYELMHEM----------------------LRNGCVVSACTTYNTIIDRL 473
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C +A L+ M GV+ N VT+N+ +D LCK G++DEAS LL M + +
Sbjct: 474 CKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL---RDE 530
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESM-GCTHTVFSYSILINGYCKNKEIEGALSLYG 309
Y T++ G C +++RA +L M ++ G T ++++LI+ + K K ++ AL+L
Sbjct: 531 VSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLE 590
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
M+ +G P V+ YN + L ++ +V++A++LFDEM G+ A + +Y I GLC
Sbjct: 591 LMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQG 650
Query: 370 YIVEAVELFRTLRILKCELD 389
EA+++ + CE+D
Sbjct: 651 RGKEALQVLEEMASSDCEID 670
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 176/388 (45%), Gaps = 28/388 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +N L K D + ++F+ + G P++ TYNI+++ CK G+V F
Sbjct: 285 PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPF 344
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + P+ V++ +I GL S+ EA + ++ G P+ TYNTL+
Sbjct: 345 LESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLM----- 399
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+F E D A + M ++PD VTY ++I G N
Sbjct: 400 ------------------AQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTN 441
Query: 195 DWNEAKCLLIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+A L+ EM+ G V T+N I+D LCK G + +A L+D M GV N Y
Sbjct: 442 RLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTY 501
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N +D C GR++ A L M+++ SY+ +I G CK ++++ A L EM++
Sbjct: 502 NIFIDRLCKEGRLDEASSLLSEMDTL---RDEVSYTTVIIGLCKAEQLDRASKLAREMVA 558
Query: 314 -KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
KG+ +N L + +++ A L + M + G + TY I LCK +
Sbjct: 559 VKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVD 618
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
+A ELF + + +Y LI GL
Sbjct: 619 KAWELFDEMAVRGIVASSVSYTVLIYGL 646
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+FN+L K K D L+L + + G P + TYN++I C CK+ +V + + +
Sbjct: 568 TFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEM 627
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
++V++T LI GLC + R EA + ++ CE + L L G
Sbjct: 628 AVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRG 687
Query: 139 IVALNLFEEMAS 150
A L M +
Sbjct: 688 EEAAELLRRMTT 699
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 43/107 (40%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++ R P V ++N++ CL K D LF + G+ +Y +LI C G
Sbjct: 591 LMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQG 650
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL 113
R VL + S + + L L + R EAA L ++
Sbjct: 651 RGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRM 697
>gi|115482710|ref|NP_001064948.1| Os10g0495100 [Oryza sativa Japonica Group]
gi|22128714|gb|AAM92826.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
gi|31432837|gb|AAP54424.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639557|dbj|BAF26862.1| Os10g0495100 [Oryza sativa Japonica Group]
gi|125575261|gb|EAZ16545.1| hypothetical protein OsJ_32018 [Oryza sativa Japonica Group]
Length = 461
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/383 (32%), Positives = 192/383 (50%), Gaps = 18/383 (4%)
Query: 35 TVLSLFKRLNSTG---LFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 91
+S + R+ G + P+LYTY++LI C C+ GR+ GF LG +++ F A+TFT
Sbjct: 64 AAVSRYNRMARAGADEVTPNLYTYSVLIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFT 123
Query: 92 SLIKGLCAESRIMEAAAL-FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS 150
L+KGLCA+ R +A + ++ GC PNVF+ L+ GL + AL L + M
Sbjct: 124 PLLKGLCADKRTSDAMDIVLCRMTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMMPD 183
Query: 151 GNGE--------------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
G+ F EG DKA + +M D+ I PDVVTY+S+I C A
Sbjct: 184 DGGDCPPDVVLYNTVINGFFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAM 243
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
++A +L M+ GV PN T+N I+ C +G++ EA L +M GV P+ N L
Sbjct: 244 DKAMEVLNTMVKNGVMPNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNLL 303
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
MD C R A+++F SM G + +Y L+ GY + L M+ GI
Sbjct: 304 MDYLCKNRRCTEARKIFNSMTKCGLKPDITTYCTLLQGYATKGALVEMHDLLDLMVWNGI 363
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+P+ ++N L + +V+ A +F +M++ G++ + YRT ID LCK + +AV
Sbjct: 364 QPNHHVFNILICAYAKQEKVDEAMLVFSKMRQQGLSPNAVNYRTVIDVLCKLGRVYDAVL 423
Query: 377 LFRTLRILKCELDIRAYNCLIDG 399
+ + DI Y LI G
Sbjct: 424 TLKQMINEGLTPDIIVYTPLIHG 446
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 136/306 (44%), Gaps = 28/306 (9%)
Query: 7 MLNMRPS-----PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
+L M P PP V +N + K D + + + G+ PD+ TY+ +I
Sbjct: 177 LLQMMPDDGGDCPPDVVLYNTVINGFFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAA 236
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK + VL ++++ PN T+ S++ G C+ ++ EA + G EP+
Sbjct: 237 LCKAQAMDKAMEVLNTMVKNGVMPNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPD 296
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
V T N L++ L + +A+++F M + PD+
Sbjct: 297 VVTCNLLMDYLCKNRRCT-----------------------EARKIFNSMTKCGLKPDIT 333
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY ++++G+ E LL M+ G+QPN FN+++ K K+DEA + M
Sbjct: 334 TYCTLLQGYATKGALVEMHDLLDLMVWNGIQPNHHVFNILICAYAKQEKVDEAMLVFSKM 393
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
Q G+ PNA Y T++D C GRV A M + G T + Y+ LI+G+C +
Sbjct: 394 RQQGLSPNAVNYRTVIDVLCKLGRVYDAVLTLKQMINEGLTPDIIVYTPLIHGFCTCDKW 453
Query: 302 EGALSL 307
E A L
Sbjct: 454 EKAEEL 459
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 113/230 (49%), Gaps = 3/230 (1%)
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
+ + P++ TY+ +I C A + L ++ +G + +TF ++ LC + + +
Sbjct: 78 DEVTPNLYTYSVLIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSD 137
Query: 234 ASRL-LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG--CTHTVFSYSI 290
A + L M Q+G PN F L+ G C R A EL M G C V Y+
Sbjct: 138 AMDIVLCRMTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVLYNT 197
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+ING+ K + + A + Y EM +GI PDVV Y+++ L + +++A ++ + M ++G
Sbjct: 198 VINGFFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG 257
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
V + TY + + G C + + EA+ + + E D+ N L+D L
Sbjct: 258 VMPNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDYL 307
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 112/237 (47%), Gaps = 14/237 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ + L K + D + + + G+ P+ TYN +++ +C G+++
Sbjct: 225 PDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPNCRTYNSIVHGYCSSGQLTEAIGF 284
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P+ VT L+ LC R EA +F + G +P++ TY TL+ G Y
Sbjct: 285 LKMMCSDGVEPDVVTCNLLMDYLCKNRRCTEARKIFNSMTKCGLKPDITTYCTLLQG-YA 343
Query: 135 TGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDVV 181
T +V ++ ++ NG + + VD+A +F +M+ + ++P+ V
Sbjct: 344 TKGALVEMHDLLDLMVWNGIQPNHHVFNILICAYAKQEKVDEAMLVFSKMRQQGLSPNAV 403
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
Y +VI C +A L +M+++G+ P+++ + ++ C K ++A L+
Sbjct: 404 NYRTVIDVLCKLGRVYDAVLTLKQMINEGLTPDIIVYTPLIHGFCTCDKWEKAEELI 460
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 196/407 (48%), Gaps = 15/407 (3%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
+ +N+R S + +FNI+ L K + + G+ P++ TYN +I+ C
Sbjct: 208 FRMNIRSS---LYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLR 264
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
G+ V+ + P+ T+ S I GLC E R+ EA+ L K+ G PN TY
Sbjct: 265 GKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTY 324
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKD 173
N LI+G G A +EM S +EG + A + +M++
Sbjct: 325 NALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMRE 384
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
+ + PD VT+ +I G+C D A LL EM+ +G+QP +VT+ ++ L K +M E
Sbjct: 385 KGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKE 444
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A L + Q G+ P+ V+N L+DG C G ++RA +L M++M +Y+ L+
Sbjct: 445 ADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQ 504
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
GYC+ ++E A L EM +GIKPD + YNTL + ++ AF++ DEM G
Sbjct: 505 GYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDP 564
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY I GLCKN A EL + + D Y +I+ +
Sbjct: 565 TILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 182/380 (47%), Gaps = 23/380 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F++L + K + L F + G P++ T N +++ F K+ R +V+ +
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMF 208
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
R + TF +I LC E ++ +A + G +PNV TYNT+I+G
Sbjct: 209 RMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHG-------- 260
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
+ G +A+ +F MKD+ + PD TY S I G C EA
Sbjct: 261 ---------------HCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEA 305
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
L+ +M++ G+ PN VT+N ++D C G +D+A D MI G+ + YN +
Sbjct: 306 SGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHA 365
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
+ GR+ A + M G +++ILINGYC+ + + A L EM+ KGI+P
Sbjct: 366 LFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPT 425
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
+V Y +L VL + ++++ A LF ++Q++G+ D + IDG C N I A +L +
Sbjct: 426 LVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLK 485
Query: 380 TLRILKCELDIRAYNCLIDG 399
+ +K D YN L+ G
Sbjct: 486 EMDNMKVLPDEITYNTLMQG 505
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 176/371 (47%), Gaps = 49/371 (13%)
Query: 15 PPVCSFN-ILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P V ++N I+ G + K + +F+ + GL PD YTYN I+ CK GR+
Sbjct: 249 PNVVTYNTIIHGHCLRGK-FQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASG 307
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLC----------------------------------- 98
++ ++L PNAVT+ +LI G C
Sbjct: 308 LICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALF 367
Query: 99 AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE---- 154
E R+ +A + ++R G P+ T+N LING R G A L +EM +
Sbjct: 368 MEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLV 427
Query: 155 --------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
G + +A LF +++ E + PD++ + ++I G C + + A LL EM
Sbjct: 428 TYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEM 487
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+ V P+ +T+N +M C+ GK++EA +LLD M + G++P+ YNTL+ G+ G +
Sbjct: 488 DNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDM 547
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
A + M + G T+ +Y+ LI G CKN+E E A L EM+SKGI PD Y ++
Sbjct: 548 KDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSI 607
Query: 327 FVVLFEIHQVE 337
+ + +E
Sbjct: 608 IEAMETVDDLE 618
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 140/287 (48%), Gaps = 23/287 (8%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ ++N+ L ++ K + G+ PD T+NILIN +C+ G F +L
Sbjct: 356 LVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLD 415
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ P VT+TSLI L +R+ EA ALF+K++ G P++ +N LI+G
Sbjct: 416 EMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDG----- 470
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
A+GN +D+A +L +M + + PD +TY ++++G+C
Sbjct: 471 ----------HCANGN--------IDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKV 512
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
EA+ LL EM +G++P+ +++N ++ K G M +A R+ D M+ G P YN L
Sbjct: 513 EEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNAL 572
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
+ G C A+EL M S G T +Y +I ++EG
Sbjct: 573 IQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLEG 619
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 69/151 (45%)
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
+++ L+ +C + N A E F ++ G + + + +++ + K + A LY
Sbjct: 146 TLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYA 205
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
EM I+ + +N + VL + ++++A + M+ GV + TY T I G C
Sbjct: 206 EMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRG 265
Query: 370 YIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
A +F+T++ E D YN I GL
Sbjct: 266 KFQRARVIFQTMKDKGLEPDCYTYNSFISGL 296
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 58/116 (50%)
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
T + +L+ YC+ K+ AL + + KG P++ N + + ++++ + A+ L+
Sbjct: 145 TTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLY 204
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
EM R + + +T+ I+ LCK + +A E + L + ++ YN +I G
Sbjct: 205 AEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHG 260
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 196/390 (50%), Gaps = 23/390 (5%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V ++N L K + + R+ S G PD+ TYNI+I FC G++
Sbjct: 132 RYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDL 191
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ +L+ P +T+T LI+ + I A L ++ G EP+ TYN +I
Sbjct: 192 ALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIR 251
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
G+ + E VDKA EL + PD++TY ++R
Sbjct: 252 GMCK-----------------------EMMVDKAFELLRSLSSRGCKPDIITYNILLRTL 288
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
W+E + L+ EM+ G +PNVVT ++++ LC++GK++EA LL M + G++P+A
Sbjct: 289 LSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDA 348
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
+ Y+ L+ GFC GR++ A E M S GC + +Y+ ++ G C+ + + AL ++ +
Sbjct: 349 YCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEK 408
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
+ G P+V YNTLF L+ RA ++ ++ G+ D TY + I LC++
Sbjct: 409 LDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGM 468
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ EA+EL ++ + ++ +YN ++ GL
Sbjct: 469 VDEAIELLVDMQSGRYRPNVVSYNIILLGL 498
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 178/380 (46%), Gaps = 12/380 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++NI+ G D L +F+ L P + TY ILI G + +
Sbjct: 171 PDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKL 230
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L P+ +T+ ++I+G+C E + +A L L GC+P++ TYN L+ L
Sbjct: 231 LDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLS 290
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G L EM S G +G V++A L MK++ + PD
Sbjct: 291 RGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYC 350
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I GFC + A L M+ G P++V +N IM LC+ GK D+A + + +
Sbjct: 351 YDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLD 410
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
++G PN YNTL +G RA E+ + + + G +Y+ LI+ C++ ++
Sbjct: 411 EVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVD 470
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ L +M S +P+VV YN + + L ++++ A ++ M G + TY I
Sbjct: 471 EAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLI 530
Query: 363 DGLCKNSYIVEAVELFRTLR 382
+G+ + EA+EL +L
Sbjct: 531 EGIGFSGLRAEAMELANSLH 550
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 143/306 (46%), Gaps = 27/306 (8%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
L+ R P + ++NIL L + L + S G P++ T++ILI C+ G+
Sbjct: 269 LSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGK 328
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V +L + P+A + LI G C E R+ A + GC P++ YNT
Sbjct: 329 VEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNT 388
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
++ GL RTG D+A E+F ++ + P+V +Y ++
Sbjct: 389 IMAGLCRTGK-----------------------ADQALEVFEKLDEVGCPPNVSSYNTLF 425
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
+ D A +++++++QG+ P+ +T+N ++ LC++G +DEA LL M R
Sbjct: 426 SALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYR 485
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY----CKNKEIEG 303
PN YN ++ G C R N A E+ +M GC +Y +LI G + + +E
Sbjct: 486 PNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMEL 545
Query: 304 ALSLYG 309
A SL+G
Sbjct: 546 ANSLHG 551
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 123/234 (52%), Gaps = 2/234 (0%)
Query: 168 FLQ-MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
FL+ M D+ PDV+ T +I+GF + + +A ++E++++ +P+V +N ++
Sbjct: 91 FLECMVDKGYTPDVILCTKLIKGFFNSRNIGKA-TRVMEILERYGKPDVFAYNALISGFI 149
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
K +++ A+R+LD M G P+ YN ++ FC G+++ A E+F + C TV
Sbjct: 150 KANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVI 209
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+Y+ILI + I+ A+ L EMLSKG++PD + YN + + + V++AF+L +
Sbjct: 210 TYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSL 269
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G D TY + L E +L + + C+ ++ ++ LI L
Sbjct: 270 SSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTL 323
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP V S+N LF L + L + +L + G+ PD TYN LI+C C+ G V
Sbjct: 415 PPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIE 474
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L + + PN V++ ++ GLC +R +A + + GC+PN TY LI G+
Sbjct: 475 LLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIG 534
Query: 134 RTGHTIVALNLFEEMASGNG 153
+G A+ L + N
Sbjct: 535 FSGLRAEAMELANSLHGMNA 554
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/386 (31%), Positives = 185/386 (47%), Gaps = 58/386 (15%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
PD YTYN LI C GR ++ VL +LR P+ VT+T L++ C S +A L
Sbjct: 30 PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKL 89
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL 169
++R GC P++ TYN ++NG+ + EG VD A E
Sbjct: 90 LDEMRDKGCTPDIVTYNVVVNGICQ-----------------------EGRVDDAIEFLK 126
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+ P+ V+Y V++G C A W +A+ L+ EM +G PNVVTFN+++ LC+ G
Sbjct: 127 NLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKG 186
Query: 230 -----------------------------------KMDEASRLLDLMIQIGVRPNAFVYN 254
KMD+A LDLM+ G P+ YN
Sbjct: 187 LVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYN 246
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+ C +G V+ A EL ++ GC + SY+ +I+G K + + AL L EM+SK
Sbjct: 247 TLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSK 306
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G++PD++ Y+T+ L ++E A + F ++Q G+ +T Y I GLCK A
Sbjct: 307 GLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSA 366
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
++LF + C + Y LI+GL
Sbjct: 367 IDLFAYMIGNGCMPNESTYTILIEGL 392
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 177/381 (46%), Gaps = 24/381 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ D ML R P V ++ IL K Y + L + G PD+ TYN+++N
Sbjct: 52 LAVLDEMLRRR-CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVN 110
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C+ GRV L + PN V++ ++KGLC R +A L ++ GC P
Sbjct: 111 GICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPP 170
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
NV T+N LI+ L R +G V+ A E+ Q+ P+
Sbjct: 171 NVVTFNMLISFLCR-----------------------KGLVEPALEVLEQIPKYGCTPNS 207
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
++Y ++ FC ++A L M+ +G P++V++N ++ LC++G++D A LL
Sbjct: 208 LSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQ 267
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+ G P YNT++DG G+ A EL M S G + +YS + G C+
Sbjct: 268 LKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDR 327
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
IE A+ +G++ GI+P+ V+YN + + L + + A LF M +G + TY
Sbjct: 328 IEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTI 387
Query: 361 FIDGLCKNSYIVEAVELFRTL 381
I+GL I EA +L L
Sbjct: 388 LIEGLAYEGLIKEARDLLDEL 408
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 122/242 (50%), Gaps = 3/242 (1%)
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
G +D A+ L +M + PD TY ++IRG C A +L EM+ + P+VVT+
Sbjct: 14 GQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTY 70
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
++++ CK +A +LLD M G P+ YN +++G C GRV+ A E ++ S
Sbjct: 71 TILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPS 130
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
GC SY+I++ G C + E A L GEM KG P+VV +N L L VE
Sbjct: 131 YGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEP 190
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A ++ +++ + G ++ +Y + CK + +A+ + C DI +YN L+
Sbjct: 191 ALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLT 250
Query: 399 GL 400
L
Sbjct: 251 AL 252
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 3/150 (2%)
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
YN ++ G+C G+++ A+ L M ++Y+ LI G C AL++ E
Sbjct: 1 MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
ML + PDVV Y L + ++A KL DEM+ G D TY ++G+C+
Sbjct: 58 MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +A+E + L CE + +YN ++ GL
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGL 147
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 65/149 (43%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
+ L + P + S+N + L K L L + S GL PD+ TY+ + C+
Sbjct: 266 HQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCRE 325
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
R+ G++ PN V + ++I GLC A LF + GC PN TY
Sbjct: 326 DRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTY 385
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGNGE 154
LI GL G A +L +E+ S GE
Sbjct: 386 TILIEGLAYEGLIKEARDLLDELCSRAGE 414
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 207/401 (51%), Gaps = 16/401 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V SFN++ + K D + +F+ + PD++TY L++ CK R+ ++
Sbjct: 170 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLL 229
Query: 75 LGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
L + + CF P++VTF LI GLC + ++ L + + GC PN TYNT+INGL
Sbjct: 230 LDEMQIEGCF-PSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLC 288
Query: 134 RTGHTIVALNLFEEMASG-----NGEFG--VEGFVDKAK-----ELFLQMKDENINPDVV 181
G A++L + M + + +G + G V + + L +++ + +
Sbjct: 289 LKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEY 348
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y+++I G EA L +M+++G QPN+V ++ ++D LC+ GK+DEA +L M
Sbjct: 349 AYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEM 408
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G PNAF Y++L+ GF TG +A ++ M C YS+LI+G C++ ++
Sbjct: 409 VNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKL 468
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM--QRDGVAADTWTYR 359
A+ ++ ML +G++PDVV Y+++ L VE KLF+EM Q D TY
Sbjct: 469 REAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYN 528
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ LCK + I A++L ++ C D+ N ++ L
Sbjct: 529 ILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 569
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 185/397 (46%), Gaps = 35/397 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FN+L L K V L + G P+ TYN +IN C G++ +
Sbjct: 240 PSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSL 299
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R++ S PN VT+ +LI GL + R ++ L + L G N + Y+TLI+GL++
Sbjct: 300 LDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFK 359
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
+ A+ L+++M + + EG +D+AKE+ +M ++ P+ T
Sbjct: 360 EEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFT 419
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+S+I+GF + +A + EM PN + ++V++ LC++GK+ EA + M+
Sbjct: 420 YSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHML 479
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM--ESMGCTHTVFSYSILINGYCKNKE 300
G+RP+ Y++++ G C G V +LF M + V +Y+IL+ CK
Sbjct: 480 GRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNS 539
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE------------------IHQVER---A 339
I A+ L ML +G PD++ N L E +H+ +R A
Sbjct: 540 ISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGA 599
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
K+ + M + + + T+ I LCK + ++
Sbjct: 600 AKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAIID 636
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 183/385 (47%), Gaps = 26/385 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINCFCKMGRVSHG--FVVL 75
+F ++F K + + LF R+ + + ++N ++N + G F
Sbjct: 101 NFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYEC 160
Query: 76 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRT 135
G ++ +PN ++F +IK +C + A +F ++ + CEP+VFTY TL++GL +
Sbjct: 161 GVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCK- 219
Query: 136 GHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
E +D+A L +M+ E P VT+ +I G C D
Sbjct: 220 ----------------------EDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGD 257
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
L+ M +G PN VT+N I++ LC GK+D+A LLD M+ PN Y T
Sbjct: 258 MVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGT 317
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L++G GR L S+E G ++YS LI+G K ++ E A+ L+ +M+ KG
Sbjct: 318 LINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKG 377
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+P++V+Y+ L L +++ A ++ EM G + +TY + I G K +A+
Sbjct: 378 CQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAI 437
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
+++ + C + Y+ LI GL
Sbjct: 438 RVWKEMAKNNCVPNEICYSVLIHGL 462
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/351 (32%), Positives = 176/351 (50%), Gaps = 23/351 (6%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
PD YTYN LI C GR S+ VL + R P+ VT+T L++ C S +A L
Sbjct: 164 PDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKL 223
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL 169
++ GC P++ TYN ++NG+ + EG V+ A E
Sbjct: 224 LDEMHDKGCAPDIVTYNVVLNGICQ-----------------------EGRVEDAMEFLK 260
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+ P+ V+Y V++G A W +A+ L+ EM +G PNVVTFN+++ LC+ G
Sbjct: 261 NLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRG 320
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
++ A +L+ M Q G PN+ YN L+ FC ++++A E M S GC + SY+
Sbjct: 321 LVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYN 380
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
L+ C+N E++ A+ L ++ KG P ++ YNT+ L + + + A +L DEM
Sbjct: 381 TLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSK 440
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G+ D TY T GLC+ I EAV F ++ + YN ++ GL
Sbjct: 441 GLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGL 491
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 173/382 (45%), Gaps = 12/382 (3%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P P ++N L L L++ + + G PD+ TY IL+ CK
Sbjct: 161 PVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQA 220
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
+L + P+ VT+ ++ G+C E R+ +A L +GCEPN +YN ++ G
Sbjct: 221 MKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKG 280
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPD 179
L+ A L EEMA V G V+ A E+ QM P+
Sbjct: 281 LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPN 340
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
++Y ++ FC ++A + M+ +G P++V++N ++ LC+NG++D A LL
Sbjct: 341 SLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLH 400
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
+ G P YNT++DG G+ A EL M S G + +YS + +G C+
Sbjct: 401 QLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCRED 460
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
IE A+ + ++ GI+P +YN + + L + + A LF M G + TY
Sbjct: 461 RIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYT 520
Query: 360 TFIDGLCKNSYIVEAVELFRTL 381
++GL + EA ELF L
Sbjct: 521 ILVEGLAYEGLVKEARELFAQL 542
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 166/349 (47%), Gaps = 12/349 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ IL K Y + L ++ G PD+ TYN+++N C+ GRV
Sbjct: 199 PDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEF 258
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + PN V++ ++KGL R +A L ++ GC PNV T+N LI+ L R
Sbjct: 259 LKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCR 318
Query: 135 TGHTIVALNLFEEMA----SGNG--------EFGVEGFVDKAKELFLQMKDENINPDVVT 182
G A+ + E+M + N F + + KA E M PD+V+
Sbjct: 319 RGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVS 378
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++ C + + A LL ++ D+G P ++++N ++D L K GK EA LLD M
Sbjct: 379 YNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMT 438
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G++P+ Y+T+ G C R+ A F ++ MG T Y+ ++ G CK +E
Sbjct: 439 SKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETH 498
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
A+ L+ M+S G P+ Y L L V+ A +LF ++ GV
Sbjct: 499 NAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGV 547
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 145/319 (45%), Gaps = 34/319 (10%)
Query: 84 TPNAV-TFTSLIKGLCAESRIMEAAALFTKLRVFGCE-PNVFTYNTLINGLYRTGHTIVA 141
+P AV +LIK LCA R +A RV P+V YN ++ G
Sbjct: 100 SPAAVGPCAALIKKLCASGRTADAR------RVLAASGPDVMVYNAMVAG---------- 143
Query: 142 LNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
+ G +D A+ L M + PD TY ++IRG C + A
Sbjct: 144 -------------YCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALA 187
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
+L +M +G P+VVT+ ++++ CK +A +LLD M G P+ YN +++G C
Sbjct: 188 VLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGIC 247
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
GRV A E ++ S GC SY+I++ G + E A L EM KG P+VV
Sbjct: 248 QEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVV 307
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+N L L VE A ++ ++M + G ++ +Y + CK I +A+E +
Sbjct: 308 TFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELM 367
Query: 382 RILKCELDIRAYNCLIDGL 400
C DI +YN L+ L
Sbjct: 368 VSRGCYPDIVSYNTLLTAL 386
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 225 LCKNGKMDEASRLLDLM--------------------------------IQIGVRPNAFV 252
L + G++D+A RL+D + + P+ V
Sbjct: 77 LVRRGELDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGRTADARRVLAASGPDVMV 136
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
YN ++ G+C G+++ A+ L M ++Y+ LI G C AL++ +M
Sbjct: 137 YNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMF 193
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
+G PDVV Y L + ++A KL DEM G A D TY ++G+C+ +
Sbjct: 194 RRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVE 253
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
+A+E + L CE + +YN ++ GL
Sbjct: 254 DAMEFLKNLPSYGCEPNTVSYNIVLKGL 281
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 207/401 (51%), Gaps = 16/401 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V SFN++ + K D + +F+ + PD++TY L++ CK R+ ++
Sbjct: 186 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLL 245
Query: 75 LGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
L + + CF P++VTF LI GLC + ++ L + + GC PN TYNT+INGL
Sbjct: 246 LDEMQIEGCF-PSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLC 304
Query: 134 RTGHTIVALNLFEEMASG-----NGEFG--VEGFVDKAK-----ELFLQMKDENINPDVV 181
G A++L + M + + +G + G V + + L +++ + +
Sbjct: 305 LKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEY 364
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y+++I G EA L +M+++G QPN+V ++ ++D LC+ GK+DEA +L M
Sbjct: 365 AYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEM 424
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G PNAF Y++L+ GF TG +A ++ M C YS+LI+G C++ ++
Sbjct: 425 VNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKL 484
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM--QRDGVAADTWTYR 359
A+ ++ ML +G++PDVV Y+++ L VE KLF+EM Q D TY
Sbjct: 485 REAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYN 544
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ LCK + I A++L ++ C D+ N ++ L
Sbjct: 545 ILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 585
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 182/388 (46%), Gaps = 35/388 (9%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FN+L L K V L + G P+ TYN +IN C G++ +
Sbjct: 256 PSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSL 315
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R++ S PN VT+ +LI GL + R ++ L + L G N + Y+TLI+GL++
Sbjct: 316 LDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFK 375
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
+ A+ L+++M + + EG +D+AKE+ +M ++ P+ T
Sbjct: 376 EEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFT 435
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+S+I+GF + +A + EM PN + ++V++ LC++GK+ EA + M+
Sbjct: 436 YSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHML 495
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM--ESMGCTHTVFSYSILINGYCKNKE 300
G+RP+ Y++++ G C G V +LF M + V +Y+IL+ CK
Sbjct: 496 GRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNS 555
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE------------------IHQVER---A 339
I A+ L ML +G PD++ N L E +H+ +R A
Sbjct: 556 ISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGA 615
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCK 367
K+ + M + + + T+ I LCK
Sbjct: 616 AKIIEVMLQKFLPPNASTWERIIPELCK 643
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 183/385 (47%), Gaps = 26/385 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINCFCKMGRVSHG--FVVL 75
+F ++F K + + LF R+ + + ++N ++N + G F
Sbjct: 117 NFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYEC 176
Query: 76 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRT 135
G ++ +PN ++F +IK +C + A +F ++ + CEP+VFTY TL++GL +
Sbjct: 177 GVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCK- 235
Query: 136 GHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
E +D+A L +M+ E P VT+ +I G C D
Sbjct: 236 ----------------------EDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGD 273
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
L+ M +G PN VT+N I++ LC GK+D+A LLD M+ PN Y T
Sbjct: 274 MVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGT 333
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L++G GR L S+E G ++YS LI+G K ++ E A+ L+ +M+ KG
Sbjct: 334 LINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKG 393
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+P++V+Y+ L L +++ A ++ EM G + +TY + I G K +A+
Sbjct: 394 CQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAI 453
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
+++ + C + Y+ LI GL
Sbjct: 454 RVWKEMAKNNCVPNEICYSVLIHGL 478
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 125/274 (45%), Gaps = 42/274 (15%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++ L L + D + + + G P+ +TY+ LI F K G V
Sbjct: 396 PNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRV 455
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ ++ PN + ++ LI GLC + ++ EA ++T + G P+V Y+++I+GL
Sbjct: 456 WKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCN 515
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G V L LF EM ++ + PDVVTY ++R C N
Sbjct: 516 AGSVEVGLKLFNEMLC---------------------QESDSQPDVVTYNILLRALCKQN 554
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL------CKNGK--MDE------------- 233
+ A LL M+D+G P+++T N+ ++ L ++G+ +DE
Sbjct: 555 SISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVG 614
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
A++++++M+Q + PNA + ++ C +V
Sbjct: 615 AAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQ 648
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 198/386 (51%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+N + +K D+ +F R+ S G PD+ TYNI+I C G++ F V
Sbjct: 129 PDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEV 188
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ +L+ P+ +T+T LI+ E RI EA LF +L G P+++TYN +I G+ +
Sbjct: 189 MDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICK 248
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
EG D+A + + NPDVV+Y ++R F +
Sbjct: 249 -----------------------EGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKS 285
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
W + + L+ +M+ G +PNVVT ++++ C+ G++ EA +L++M + G+ P+++ Y+
Sbjct: 286 RWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYD 345
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ FC GR++ A E M S GC + +Y+ ++ CK + AL ++ ++
Sbjct: 346 PLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEV 405
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G P V YNT+F L+ +A ++ EM R G+ D TY + I LC++ + EA
Sbjct: 406 GCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEA 465
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ L + + + + ++N ++ G+
Sbjct: 466 IGLLVDMEATRFQPTVISFNIVLLGM 491
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 138/285 (48%), Gaps = 12/285 (4%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
L+ R P V S+NIL ++ L K + +G P++ T++ILI+ FC+ GR
Sbjct: 262 LSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGR 321
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V VL + TP++ ++ LI C E R+ A K+ GC P++ YNT
Sbjct: 322 VREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNT 381
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVD------------KAKELFLQMKDEN 175
++ L + G +AL++FE++ V + KA E+ +M +
Sbjct: 382 ILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKG 441
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
I+PD +TY S+I C +EA LL++M QP V++FN+++ +CK ++ E
Sbjct: 442 IDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGI 501
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
LL M++ G PN Y L++G G A EL S+ +G
Sbjct: 502 ELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLG 546
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 112/223 (50%)
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
+PDV +Y ++I GF AN + A + M +G P+VVT+N+++ LC GK++ A
Sbjct: 128 DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFE 187
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
++D +++ G +P+ Y L++ L GR+N A ELF + S G +++Y+ +I G C
Sbjct: 188 VMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGIC 247
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K + AL + ++G PDVV YN L + E +L +M G +
Sbjct: 248 KEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVV 307
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
T+ I C+ + EAV + ++ D +Y+ LI
Sbjct: 308 THSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISA 350
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 116/244 (47%), Gaps = 12/244 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + +IL + +++ + + GL PD Y+Y+ LI+ FCK GR+
Sbjct: 304 PNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEY 363
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ P+ V + +++ LC A +F KL GC P V YNT+ + L+
Sbjct: 364 LEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWS 423
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
G+ I AL + EM + +G VD+A L + M+ P V++
Sbjct: 424 CGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVIS 483
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ V+ G C A+ E LLI M+++G PN ++ ++++ + G EA L + +
Sbjct: 484 FNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLY 543
Query: 243 QIGV 246
++GV
Sbjct: 544 RLGV 547
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 107/220 (48%), Gaps = 1/220 (0%)
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
PDVV T +I+GF + + +A ++E+++ P+V ++N ++ K ++D A+++
Sbjct: 95 PDVVLCTKLIKGFFNSRNLKKA-MRVMEILETYGDPDVYSYNAMISGFSKANQIDSANQV 153
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
D M G P+ YN ++ C G++ A E+ + GC +V +Y+ILI
Sbjct: 154 FDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATIL 213
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
I AL L+ E++S+G++PD+ YN + + + +RA + G D +
Sbjct: 214 EGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVS 273
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
Y + S + L + + + CE ++ ++ LI
Sbjct: 274 YNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILI 313
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 1/144 (0%)
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L++ C G+ N + S+ S G V + LI G+ ++ ++ A+ + E+L
Sbjct: 68 LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVM-EILETY 126
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
PDV YN + + +Q++ A ++FD M+ G + D TY I LC + A
Sbjct: 127 GDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186
Query: 376 ELFRTLRILKCELDIRAYNCLIDG 399
E+ L C+ + Y LI+
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEA 210
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 195/390 (50%), Gaps = 23/390 (5%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ ++ S P ++ L L K S F + GL P++ TYN+L++ F K+G+
Sbjct: 126 MKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQ 185
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ + + R F P+ VT+ L+ LC+ R+ A LF K+ GC P+ +TY+T
Sbjct: 186 LDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYST 245
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
L+NGL G G V++A ++F +M D + D+V Y S++
Sbjct: 246 LVNGL-----------------------GKSGRVEEAHKVFREMVDRGVAVDLVNYNSLL 282
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
A + + L+ EM +G P+ +FN IMD L K K D A + M++ G +
Sbjct: 283 ATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCK 342
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P+ YN L+D + G +A+++ M G +Y+ LI+ + +++ A ++
Sbjct: 343 PDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAV 402
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
EM + G +PDVV YN L +L + + +RA +LF +M+ GV DT +Y IDGL
Sbjct: 403 LEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAF 462
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ + EA+ LF+ ++ + C +D Y LI
Sbjct: 463 DDRLDEALVLFKDMKAVGCPVDKAMYRILI 492
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 173/365 (47%), Gaps = 23/365 (6%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
D + +L K + + G T LI + + + F + + +P FT L
Sbjct: 12 DPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKL 71
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG 153
I L A ++ KL GC+ + F YN LI
Sbjct: 72 IDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIR----------------------- 108
Query: 154 EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
FG G +D A E+F +MK + PD TY ++ A EA+ M+++G+ P
Sbjct: 109 YFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTP 168
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
N+ T+N++MD K G++D A L M + G +P+ YN L+D C GRV A++LF
Sbjct: 169 NIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLF 228
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
M GC+ ++YS L+NG K+ +E A ++ EM+ +G+ D+V YN+L L +
Sbjct: 229 HKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKA 288
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
++R +KL EM R G D +++ T +D L K + A E+F + C+ D+ +Y
Sbjct: 289 GNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISY 348
Query: 394 NCLID 398
N LID
Sbjct: 349 NILID 353
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 111/242 (45%)
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
G +D + L +M E T +I + N +A L + P V F
Sbjct: 9 GILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAF 68
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
++D L +G+ + A + ++Q G + + F YN L+ F +G+++ A E+F M+
Sbjct: 69 TKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKI 128
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
G ++Y L+N K ++ A S + ML +G+ P++ YN L ++ Q++
Sbjct: 129 KGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDM 188
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A LF EM+R G TY +D LC + A +LF + C D Y+ L++
Sbjct: 189 ALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVN 248
Query: 399 GL 400
GL
Sbjct: 249 GL 250
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 200/396 (50%), Gaps = 12/396 (3%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP S+N++ L ++ L +F + G+ P+ TYN +I+ K G + GF
Sbjct: 13 PPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFR 72
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ ++L PN VT+ L+ GLC R+ E L ++ P+ FTY+ L +GL
Sbjct: 73 LRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLT 132
Query: 134 RTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVV 181
RTG + L+LF E G +G V KA+++ + + P V
Sbjct: 133 RTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTV 192
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y ++I G+C D A C+ +M + ++P+ +T+N +++ LCK + +A L+ M
Sbjct: 193 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM 252
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ GV P+ +NTL+D + G++ + + M+ G V S+ ++ +CKN +I
Sbjct: 253 EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKI 312
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A+++ +M+ K + P+ +YN++ E E+AF L ++M+ GV+A TY
Sbjct: 313 PEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLL 372
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ GLC++S I EA EL TLR D+ +YN +I
Sbjct: 373 LKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTII 408
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 167/387 (43%), Gaps = 47/387 (12%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ILF L + T+LSLF G+ YT +IL+N CK G+V+ V
Sbjct: 119 PDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQV 178
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ + P V + +LI G C + A +F +++ P+ TYN LINGL +
Sbjct: 179 LEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCK 238
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
A +L EM + +G G ++K + M+ + I DV++
Sbjct: 239 LEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVIS 298
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN---------------------------- 214
+ SV++ FC EA +L +M+ + V PN
Sbjct: 299 FGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMK 358
Query: 215 -------VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+VT+N+++ LC++ ++DEA L+ + G+RP+ YNT++ C G +
Sbjct: 359 NSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTD 418
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
+A EL M G T+ +Y L++ + LY +ML K ++P IY +
Sbjct: 419 KALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMV 478
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAAD 354
+ L EM G+A D
Sbjct: 479 DAYVRCENDSKVASLKKEMSEKGIAFD 505
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 135/280 (48%), Gaps = 23/280 (8%)
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPD 179
P+ F+YN +I GL+R+G AL +F+EM D + P+
Sbjct: 14 PDAFSYNVVIAGLWRSGKGSDALKVFDEMV-----------------------DMGVVPN 50
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
+TY ++I G D L +M+ G +PN+VT+NV++ LC+ G+MDE L+D
Sbjct: 51 WITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMD 110
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M + P+ F Y+ L DG TG LF G ++ SIL+NG CK+
Sbjct: 111 EMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDG 170
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++ A + ++ G+ P VIYNTL ++ + AF +F++M+ + D TY
Sbjct: 171 KVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYN 230
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I+GLCK + +A +L + + + +N LID
Sbjct: 231 ALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDA 270
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 209/394 (53%), Gaps = 13/394 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ +FD ML + P + +FN L L K + LF ++ G+ P+L+T+NI I
Sbjct: 201 YHLFDEMLK-QGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C+ G + +L I+ TP+ +++ +LI G C S+++EA K+ G EP
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEE-MASG--NGEFGV---------EGFVDKAKELF 168
N FTYNT+ING + G A + + M G EF +G +++A +F
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVF 379
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+ ++ ++ Y ++++G +A L+ +MM+ G P++ T+N++++ LCK
Sbjct: 380 YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKM 439
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G + +A+ +L+ I G P+ F +NTL+DG+C +++A E+ +M S G T V +Y
Sbjct: 440 GCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITY 499
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ L+NG CK ++++ + + ML KG P+++ YN L + +V A +LF EM+
Sbjct: 500 NTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKT 559
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
G+ D T T I GLC N + +A ELF T+
Sbjct: 560 RGLTPDIVTLCTLICGLCSNGELDKAYELFVTIE 593
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 203/398 (51%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+N + L + ++ ++ R+ G++PD+YT+ I + FC GR + +
Sbjct: 109 PSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRL 168
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + NAV++ ++I G E+ +EA LF ++ G P++ T+N LI+ L +
Sbjct: 169 LNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCK 228
Query: 135 TGHTIVALNLFEEMASGNG-----EFGV-------EGFVDKAKELFLQMKDENINPDVVT 182
G+ + LF ++ F + +G +D+A L + E + PDV++
Sbjct: 229 KGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVIS 288
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I GFC + EA+C L +M++ GV+PN T+N I++ CK G M A ++L +
Sbjct: 289 YNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAM 348
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G P+ F Y++L++G C G +NRA +F G H++ Y+ L+ G K +
Sbjct: 349 FKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVL 408
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL L +M+ G PD+ YN + L ++ + A + ++ G D +T+ T I
Sbjct: 409 QALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLI 468
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
DG CK + +A+E+ T+ D+ YN L++GL
Sbjct: 469 DGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGL 506
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 173/392 (44%), Gaps = 82/392 (20%)
Query: 90 FTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN------------------- 130
+ +++ + ++ EA +F ++ + CEP+V +YN ++N
Sbjct: 79 YIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMK 138
Query: 131 --GLYR--------------TGHTIVALNLFEEMASGNGEFG-------VEGFVD----- 162
G+Y TG AL L M EF + GF
Sbjct: 139 DIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQI 198
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
+A LF +M + I PD++T+ +I C + E++ L ++M +GV PN+ TFN+ +
Sbjct: 199 EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFI 258
Query: 223 DELCKNGKMDEASRLLD-----------------------------------LMIQIGVR 247
LC+ G +DEA+RLL+ M+ GV
Sbjct: 259 QGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVE 318
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
PN F YNT+++GFC G + A ++ G F+YS LING C + ++ A+++
Sbjct: 319 PNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAV 378
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
+ E + KG K +++YNTL L + V +A +L +M G + D WTY ++GLCK
Sbjct: 379 FYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCK 438
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ +A + C DI +N LIDG
Sbjct: 439 MGCLSDANGILNDAIAKGCIPDIFTFNTLIDG 470
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 181/413 (43%), Gaps = 56/413 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+N L K+ ++ ++G+ P+ +TYN +IN FCK G + + +
Sbjct: 284 PDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKI 343
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + F P+ T++SLI GLC + + A A+F + G + ++ YNTL+ GL +
Sbjct: 344 LRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSK 403
Query: 135 TGHTIVALNLFEEM-------------------------ASGNGEFG------------- 156
G + AL L ++M + NG
Sbjct: 404 QGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFT 463
Query: 157 ----VEGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
++G+ +DKA E+ M I PDV+TY +++ G C A + M+
Sbjct: 464 FNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAML 523
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
++G PN++T+N++++ CK+ K+ EA L M G+ P+ TL+ G C G ++
Sbjct: 524 EKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELD 583
Query: 268 RAKELFVSMESMGCTHTVFSYS-----ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
+A ELFV++E FSYS I+IN +C + A L+ +M PD
Sbjct: 584 KAYELFVTIEK----EYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYT 639
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
Y + + ++ A E G+ T ++ LC + EAV
Sbjct: 640 YRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAV 692
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 139/275 (50%), Gaps = 18/275 (6%)
Query: 141 ALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDVV--TYTS 185
AL +F ++ + +G + G+ G + +++ +M+ +N++ ++ Y
Sbjct: 23 ALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMR-KNVDSKMLEGVYIG 81
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
++R + EA + M +P+V ++N IM+ L + G +A ++ M IG
Sbjct: 82 IMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIG 141
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING-YCKNKEIEGA 304
+ P+ + + M FC+TGR A L +M GC SY +I+G Y +N +IE A
Sbjct: 142 IYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE-A 200
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L+ EML +GI PD++ +N L VL + V+ + KLF ++ + GV + +T+ FI G
Sbjct: 201 YHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQG 260
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
LC+ I EA L ++ D+ +YN LI G
Sbjct: 261 LCRKGAIDEAARLLESIVSEGLTPDVISYNTLICG 295
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 125/411 (30%), Positives = 201/411 (48%), Gaps = 44/411 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M++ + P +F IL L ++ + L R+ G PD YN LI+ +
Sbjct: 29 VFQEMID-KSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALISGY 87
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K F L ++++ P VT+T+++ GLC R +A L ++R GC PN+
Sbjct: 88 SKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNI 147
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG--------VEGF-----VDKAKELFL 169
+TYN ++ GL A + EEMA G F ++G VD+A++
Sbjct: 148 YTYNVIVEGLCEERKLDEAKKMLEEMAV-RGYFPDVVTYNSFIKGLCKCDRVDEARKFLA 206
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M + PDVV+YT+VI G C + D + A +L M ++G P+VVT++ ++D CK G
Sbjct: 207 RMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGG 263
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+++ A LLD M+++G RPN YN+L+ G + +A+++ V ME G T V SY+
Sbjct: 264 EVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYN 323
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
I+G CK + ++ A +++ M+ +G P+ Y+ L V
Sbjct: 324 ACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIV--------------------- 362
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK-CELDIRAYNCLIDG 399
D Y +DGLCK EA LF + K CE D+ YN ++D
Sbjct: 363 ----DILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDS 409
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 185/377 (49%), Gaps = 27/377 (7%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G +++TYN L+ + R V ++ P+A TF L++GLC +++ +A
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG-------------NG 153
L +++ GC P+ YN LI+G + A EM +G
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121
Query: 154 EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
E D K L +M+D+ +P++ TY ++ G C +EAK +L EM +G P
Sbjct: 122 LCKAERTRDAVK-LLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
+VVT+N + LCK ++DEA + L ++ V P+ Y T+++G C +G ++ A +
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFL---ARMPVTPDVVSYTTVINGLCKSGDLDSASRML 237
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
M + GCT V +YS LI+G+CK E+E A+ L ML G +P++V YN+L L +
Sbjct: 238 DHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRL 297
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE------ 387
+ +A + EM+R G D +Y IDGLCK + +A +F + C
Sbjct: 298 GHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSY 357
Query: 388 ----LDIRAYNCLIDGL 400
+DI Y L+DGL
Sbjct: 358 SMLIVDILLYTVLLDGL 374
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 191/393 (48%), Gaps = 33/393 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N++ L + + D + + + G FPD+ TYN I CK RV
Sbjct: 145 PNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF 204
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R+ TP+ V++T++I GLC + A+ + + GC P+V TY++LI+G +
Sbjct: 205 LARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCK 261
Query: 135 TGHTIVALNLFEEMA------------SGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G A+ L + M S G G + KA+++ ++M+ PDVV+
Sbjct: 262 GGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVS 321
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN----------VVTFNVIMDELCKNGKMD 232
Y + I G C A +AK + M+++G PN ++ + V++D LCK G+ D
Sbjct: 322 YNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFD 381
Query: 233 EA----SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
EA S++LD I P+ F YN ++D C ++++A ++ M C + V ++
Sbjct: 382 EACALFSKVLDEKI---CEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCCNVV-TW 437
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+IL++G C + + A ++ M+ +G PD V Y TL + + + A +LF+E +
Sbjct: 438 NILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVK 497
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
G D TY I GL + EA LF L
Sbjct: 498 GGCVPDVVTYSALITGLVHENMAEEAYLLFTKL 530
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 150/362 (41%), Gaps = 60/362 (16%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L K D R+ T PD+ +Y +IN CK G + +
Sbjct: 180 PDVVTYNSFIKGLCKCDRVDEARKFLARMPVT---PDVVSYTTVINGLCKSGDLDSASRM 236
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + TP+ VT++SLI G C + A L + GC PN+ YN+L+ L+R
Sbjct: 237 LDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHR 296
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINP---- 178
GH A ++ EM V + V KAK +F +M + P
Sbjct: 297 LGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASS 356
Query: 179 ------DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV-QP------------------ 213
D++ YT ++ G C ++EA L +++D+ + +P
Sbjct: 357 YSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQI 416
Query: 214 ----------------NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
NVVT+N+++ LC + ++ +A +L M+ G P+ Y TL+
Sbjct: 417 DKALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLV 476
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
D C G+ A ELF GC V +YS LI G E A L+ +++ +
Sbjct: 477 DAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWV 536
Query: 318 PD 319
PD
Sbjct: 537 PD 538
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 75/157 (47%)
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
+G N F YN L+ R ++A +F M C F+++IL+ G C++ ++E
Sbjct: 1 MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A L G M G PD IYN L + +AFK EM ++ TY +D
Sbjct: 61 ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GLCK +AV+L +R C +I YN +++GL
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGL 157
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 112/280 (40%), Gaps = 58/280 (20%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D ML + P V ++N L G L + H + + G PD+ +YN I+
Sbjct: 271 LLDSMLKLGCRPNMV-AYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 329
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTF----------TSLIKGLCAESRIMEAAALFTK 112
CK RV V R++ TPNA ++ T L+ GLC R EA ALF+K
Sbjct: 330 CKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSK 389
Query: 113 -LRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN-----------GEFGVEGF 160
L CEP+VF YN +++ + AL + ++M N V+
Sbjct: 390 VLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCCNVVTWNILVHGLCVDDR 449
Query: 161 VDKAKELFLQMKDENI-----------------------------------NPDVVTYTS 185
+ A+ + L M DE PDVVTY++
Sbjct: 450 LSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSA 509
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
+I G + N EA L +++++ P+ T ++ +L
Sbjct: 510 LITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKL 549
>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 484
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 136/419 (32%), Positives = 206/419 (49%), Gaps = 26/419 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG---LFPDLYTYNILI 59
+FD +L R + N +A++ V S + R+ G + P+L TY ILI
Sbjct: 41 VFDELLR-RGRGASIYGLNCALADVARHSPAAAV-SRYNRMARAGADEVTPNLCTYGILI 98
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGC 118
C GR+ GF LG +++ F +A+ FT L+KGLCA+ R +A + ++ GC
Sbjct: 99 GSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGC 158
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE--------------FGVEGFVDKA 164
PNVF+YN L+ GL + AL L + M G+ F EG +DKA
Sbjct: 159 IPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKA 218
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
+ +M D I P+VVTY+S+I C A ++A +L M+ GV PN T+N I+
Sbjct: 219 YGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHG 278
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
C +G+ EA L M GV P+ YN+LMD C GR A+++F SM G
Sbjct: 279 YCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338
Query: 285 VFSYSILINGYCKNK---EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
+ +Y L+ GY E+ G L L M+ GI P+ +++ L + +V++A
Sbjct: 339 ITTYGTLLQGYATKGALVEMHGLLDL---MVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+F +M++ G+ DT TY T I LCK+ + +A+ F + + YN LI L
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 137/298 (45%), Gaps = 17/298 (5%)
Query: 7 MLNMRPS-----PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
+L M P PP V S+ + K D + + G+ P++ TY+ +I
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA 243
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK + VL ++++ PN T+ S++ G C+ + EA K+ G EP+
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFL 169
V TYN+L++ L + G A +F+ M + + +G + + L
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
M I+P+ ++ +I + ++A + +M QG+ P+ VT+ ++ LCK+G
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
++++A R + MI + P VYN+L+ C+ + ++AK+ F+ T+FS
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKDYFLKCWIEAFVWTLFS 481
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 209/394 (53%), Gaps = 13/394 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ +FD ML + P + +FN L L K + LF ++ G+ P+L+T+NI I
Sbjct: 201 YHLFDEMLK-QGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C+ G + +L I+ TP+ +++ +LI G C S+++EA K+ G EP
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEE-MASG--NGEFGV---------EGFVDKAKELF 168
N FTYNT+ING + G A + + M G EF +G +++A +F
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVF 379
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+ ++ ++ Y ++++G +A L+ +MM+ G P++ T+N++++ LCK
Sbjct: 380 YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKM 439
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G + +A+ +L+ I G P+ F +NTL+DG+C +++A E+ +M S G T V +Y
Sbjct: 440 GCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITY 499
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ L+NG CK ++++ + + ML KG P+++ YN L + +V A +LF EM+
Sbjct: 500 NTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKT 559
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
G+ D T T I GLC N + +A ELF T+
Sbjct: 560 RGLTPDIVTLCTLICGLCSNGELDKAYELFVTIE 593
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 203/398 (51%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+N + L + ++ ++ R+ G++PD+YT+ I + FC GR + +
Sbjct: 109 PSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRL 168
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + NAV++ ++I G E+ +EA LF ++ G P++ T+N LI+ L +
Sbjct: 169 LNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCK 228
Query: 135 TGHTIVALNLFEEMASGNG-----EFGV-------EGFVDKAKELFLQMKDENINPDVVT 182
G+ + LF ++ F + +G +D+A L + E + PDV++
Sbjct: 229 KGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVIS 288
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I GFC + EA+C L +M++ GV+PN T+N I++ CK G M A ++L +
Sbjct: 289 YNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAM 348
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G P+ F Y++L++G C G +NRA +F G H++ Y+ L+ G K +
Sbjct: 349 FKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVL 408
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL L +M+ G PD+ YN + L ++ + A + ++ G D +T+ T I
Sbjct: 409 QALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLI 468
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
DG CK + +A+E+ T+ D+ YN L++GL
Sbjct: 469 DGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGL 506
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 173/392 (44%), Gaps = 82/392 (20%)
Query: 90 FTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN------------------- 130
+ +++ + ++ EA +F ++ + CEP+V +YN ++N
Sbjct: 79 YIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMK 138
Query: 131 --GLYR--------------TGHTIVALNLFEEMASGNGEFG-------VEGFVD----- 162
G+Y TG AL L M EF + GF
Sbjct: 139 DIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQI 198
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
+A LF +M + I PD++T+ +I C + E++ L ++M +GV PN+ TFN+ +
Sbjct: 199 EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFI 258
Query: 223 DELCKNGKMDEASRLLD-----------------------------------LMIQIGVR 247
LC+ G +DEA+RLL+ M+ GV
Sbjct: 259 QGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVE 318
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
PN F YNT+++GFC G + A ++ G F+YS LING C + ++ A+++
Sbjct: 319 PNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAV 378
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
+ E + KG K +++YNTL L + V +A +L +M G + D WTY ++GLCK
Sbjct: 379 FYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCK 438
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ +A + C DI +N LIDG
Sbjct: 439 MGCLSDANGILNDAIAKGCIPDIFTFNTLIDG 470
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 183/423 (43%), Gaps = 83/423 (19%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+N L K+ ++ ++G+ P+ +TYN +IN FCK G + + +
Sbjct: 284 PDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKI 343
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + F P+ T++SLI GLC + + A A+F + G + ++ YNTL+ GL +
Sbjct: 344 LRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSK 403
Query: 135 TGHTIVALNLFEEM-------------------------ASGNGEFG------------- 156
G + AL L ++M + NG
Sbjct: 404 QGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFT 463
Query: 157 ----VEGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
++G+ +DKA E+ M I PDV+TY +++ G C A + M+
Sbjct: 464 FNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAML 523
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
++G PN++T+N++++ CK+ K+ EA L M G+ P+ TL+ G C G ++
Sbjct: 524 EKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELD 583
Query: 268 RAKELFVSMES---------------------------------MG---CTHTVFSYSIL 291
+A ELFV++E MG C ++Y ++
Sbjct: 584 KAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVM 643
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I+ YCK I+ A + E +SKG+ P + L H++ A + + M ++G+
Sbjct: 644 IDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGI 703
Query: 352 AAD 354
+
Sbjct: 704 VPE 706
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 139/275 (50%), Gaps = 18/275 (6%)
Query: 141 ALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDVV--TYTS 185
AL +F ++ + +G + G+ G + +++ +M+ +N++ ++ Y
Sbjct: 23 ALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMR-KNVDSKMLEGVYIG 81
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
++R + EA + M +P+V ++N IM+ L + G +A ++ M IG
Sbjct: 82 IMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIG 141
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING-YCKNKEIEGA 304
+ P+ + + M FC+TGR A L +M GC SY +I+G Y +N +IE A
Sbjct: 142 IYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE-A 200
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L+ EML +GI PD++ +N L VL + V+ + KLF ++ + GV + +T+ FI G
Sbjct: 201 YHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQG 260
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
LC+ I EA L ++ D+ +YN LI G
Sbjct: 261 LCRKGAIDEAARLLESIVSEGLTPDVISYNTLICG 295
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 118/363 (32%), Positives = 188/363 (51%), Gaps = 24/363 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ +FD M + P V +++ G K + LF + S GL PD TY LI+
Sbjct: 377 YKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEA-RKLFSEMLSKGLKPDEVTYTALID 435
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+CK G + F + +++ TPN VT+T+L+ GLC + A L ++ G +P
Sbjct: 436 GYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQP 495
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
NV TYN LINGL + G+ A+ L EEM + GF PD
Sbjct: 496 NVCTYNALINGLCKVGNIEQAVKLMEEM-------DLAGFF----------------PDT 532
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+TYT+++ +C + +A LL M+D+G+QP +VTFNV+M+ C +G +++ RL+
Sbjct: 533 ITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKW 592
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M+ G+ PNA +N+LM +C+ + E++ M + G +Y+ILI G+CK +
Sbjct: 593 MLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARN 652
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
++ A L+ EM+ KG YN+L ++ + E A KLF+EM+ G A+ Y
Sbjct: 653 MKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDI 712
Query: 361 FID 363
F+D
Sbjct: 713 FVD 715
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 127/404 (31%), Positives = 202/404 (50%), Gaps = 12/404 (2%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R + P V S++++ + + VL L + L GL P+ YTYN +I+ CK GR
Sbjct: 278 MEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGR 337
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V VL + P+ V +T+LI G + LF +++ P+ TY +
Sbjct: 338 VVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTS 397
Query: 128 LINGLYRTGHTIVALNLFEEMASGN---GEFGVEGFVD---KAKE------LFLQMKDEN 175
+I+GL + G + A LF EM S E +D KA E L QM ++
Sbjct: 398 MIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKG 457
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+ P+VVTYT+++ G C + + A LL EM ++G+QPNV T+N +++ LCK G +++A
Sbjct: 458 LTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAV 517
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+L++ M G P+ Y T+MD +C G + +A EL M G T+ ++++L+NG+
Sbjct: 518 KLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGF 577
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
C + +E L ML KGI P+ +N+L + + +++ M GV DT
Sbjct: 578 CMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDT 637
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
TY I G CK + EA L + + L +YN LI G
Sbjct: 638 NTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKG 681
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 200/393 (50%), Gaps = 12/393 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S+NI+ L + SL ++ G PD+ +Y+++++ +C++ ++ ++ +
Sbjct: 254 SYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEEL 313
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
R PN T+ S+I LC R++EA + ++ P+ Y TLI+G ++G+
Sbjct: 314 QRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNV 373
Query: 139 IVALNLFEEMASGN--GEFGV----------EGFVDKAKELFLQMKDENINPDVVTYTSV 186
V LF+EM +F G V +A++LF +M + + PD VTYT++
Sbjct: 374 SVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTAL 433
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G+C A + EA L +M+++G+ PNVVT+ ++D LCK G++D A+ LL M + G+
Sbjct: 434 IDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGL 493
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+PN YN L++G C G + +A +L M+ G +Y+ +++ YCK E+ A
Sbjct: 494 QPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHE 553
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L ML KG++P +V +N L +E +L M G+ + T+ + + C
Sbjct: 554 LLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYC 613
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + +E+++ + D YN LI G
Sbjct: 614 IRNNMRATIEIYKGMHAQGVVPDTNTYNILIKG 646
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 183/359 (50%), Gaps = 12/359 (3%)
Query: 35 TVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 94
T +F+ + G+ + +YNI+++ C++G+V +L ++ P+ V+++ ++
Sbjct: 235 TAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIV 294
Query: 95 KGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN-- 152
G C ++ + L +L+ G +PN +TYN++I+ L +TG + A + M +
Sbjct: 295 DGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIF 354
Query: 153 ----------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
FG G V +LF +MK + I PD VTYTS+I G C A EA+ L
Sbjct: 355 PDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKL 414
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
EM+ +G++P+ VT+ ++D CK G+M EA L + M++ G+ PN Y L+DG C
Sbjct: 415 FSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCK 474
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G V+ A EL M G V +Y+ LING CK IE A+ L EM G PD +
Sbjct: 475 CGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTIT 534
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
Y T+ ++ ++ +A +L M G+ T+ ++G C + + + L + +
Sbjct: 535 YTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWM 593
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 163/332 (49%), Gaps = 21/332 (6%)
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI-VALNL 144
+ + F + L ++EA LF KL +G +V + N + L + I A +
Sbjct: 180 HPLVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRV 239
Query: 145 FEEMASGNGEFGV----------------EGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
F E + E GV G V +A L +QM+ PDVV+Y+ ++
Sbjct: 240 FREYS----EVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVD 295
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
G+C + L+ E+ +G++PN T+N I+ LCK G++ EA ++L +M + P
Sbjct: 296 GYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFP 355
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
+ VY TL+ GF +G V+ +LF M+ +Y+ +I+G C+ ++ A L+
Sbjct: 356 DNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLF 415
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
EMLSKG+KPD V Y L + +++ AF L ++M G+ + TY +DGLCK
Sbjct: 416 SEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKC 475
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ A EL + + ++ YN LI+GL
Sbjct: 476 GEVDIANELLHEMSEKGLQPNVCTYNALINGL 507
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 200/396 (50%), Gaps = 12/396 (3%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP S+N++ L ++ L +F + G+ P+ TYN +I+ K G + GF
Sbjct: 191 PPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFR 250
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ ++L PN VT+ L+ GLC R+ E L ++ P+ FTY+ L +GL
Sbjct: 251 LRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLT 310
Query: 134 RTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVV 181
RTG + L+LF E G +G V KA+++ + + P V
Sbjct: 311 RTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTV 370
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y ++I G+C D A C+ +M + ++P+ +T+N +++ LCK + +A L+ M
Sbjct: 371 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM 430
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ GV P+ +NTL+D + G++ + + M+ G V S+ ++ +CKN +I
Sbjct: 431 EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKI 490
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A+++ +M+ K + P+ +YN++ E E+AF L ++M+ GV+A TY
Sbjct: 491 PEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLL 550
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ GLC++S I EA EL TLR D+ +YN +I
Sbjct: 551 LKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTII 586
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 189/402 (47%), Gaps = 15/402 (3%)
Query: 13 SP-PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
SP P + S N+L L + V + F L + G PD + +N ++ G +
Sbjct: 117 SPLPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVA 176
Query: 72 FVVLGRILRS--CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
++ R+ RS P+A ++ +I GL + +A +F ++ G PN TYNT+I
Sbjct: 177 LAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMI 236
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENIN 177
+G + G L ++M + + G +D+ + L +M ++
Sbjct: 237 DGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMF 296
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
PD TY+ + G + L E + +GV T +++++ LCK+GK+ +A ++
Sbjct: 297 PDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQV 356
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
L++++ G+ P +YNTL++G+C + A +F M+S +Y+ LING CK
Sbjct: 357 LEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCK 416
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+ + A L EM G+ P V +NTL Q+E+ F + +MQ+ G+ +D +
Sbjct: 417 LEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVIS 476
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + + CKN I EAV + + + + YN +ID
Sbjct: 477 FGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDA 518
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 167/387 (43%), Gaps = 47/387 (12%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ILF L + T+LSLF G+ YT +IL+N CK G+V+ V
Sbjct: 297 PDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQV 356
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ + P V + +LI G C + A +F +++ P+ TYN LINGL +
Sbjct: 357 LEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCK 416
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
A +L EM + +G G ++K + M+ + I DV++
Sbjct: 417 LEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVIS 476
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN---------------------------- 214
+ SV++ FC EA +L +M+ + V PN
Sbjct: 477 FGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMK 536
Query: 215 -------VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+VT+N+++ LC++ ++DEA L+ + G+RP+ YNT++ C G +
Sbjct: 537 NSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTD 596
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
+A EL M G T+ +Y L++ + LY +ML K ++P IY +
Sbjct: 597 KALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMV 656
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAAD 354
+ L EM G+A D
Sbjct: 657 DAYVRCENDSKVASLKKEMSEKGIAFD 683
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 113/356 (31%), Positives = 190/356 (53%), Gaps = 23/356 (6%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P +F+ L L+ + LF + G PD TY LI+ +CK+G
Sbjct: 241 MEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGE 300
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ F + ++++ TPN VT+T+L GLC + A L ++ G + N+ TYNT
Sbjct: 301 MKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNT 360
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
++NGL + G+ + A+ L EEM K+ ++PD +TYT+++
Sbjct: 361 IVNGLCKAGNILQAVKLMEEM-----------------------KEAGLHPDTITYTTLM 397
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
+ + +A+ LL EM+D+G+QP VVTFNV+M+ LC +GK+++ RLL M++ G+
Sbjct: 398 DAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIM 457
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
PNA YN++M +C+ + + E++ M + G +Y+ILI G+CK + ++ A L
Sbjct: 458 PNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFL 517
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
+ EM+ K YN L F+ ++ A +LF+EM+R+G+ A Y F+D
Sbjct: 518 HKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVD 573
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/397 (31%), Positives = 198/397 (49%), Gaps = 12/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+ + V+ L K + GL P+LYTY+ +I CK G+V G V
Sbjct: 143 PDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKV 202
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ P+ V +T+LI G C A LF+++ P+ ++ LI GL
Sbjct: 203 LREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSG 262
Query: 135 TGHTIVALNLFEEMASGNGEFG-------VEGF-----VDKAKELFLQMKDENINPDVVT 182
+G + A LF EM E ++G+ + KA L QM + P+VVT
Sbjct: 263 SGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVT 322
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT++ G C + + + A LL EM +G+Q N+ T+N I++ LCK G + +A +L++ M
Sbjct: 323 YTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMK 382
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ P+ Y TLMD + TG + +A+EL M G TV ++++L+NG C + ++E
Sbjct: 383 EAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLE 442
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
L ML KGI P+ YN++ + + + +++ M GV D+ TY I
Sbjct: 443 DGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILI 502
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G CK + EA L + + + L +YN LI G
Sbjct: 503 KGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKG 539
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 193/394 (48%), Gaps = 14/394 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S+NIL L + L R+ G PD+ +Y +I+ +C +G + ++ +
Sbjct: 112 SYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEM 171
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PN T++S+I LC +++E + ++ G P+ Y TLI+G + G+T
Sbjct: 172 QLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNT 231
Query: 139 IVALNLFEEMASGN-------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
A LF EM + G G G V +A +LF +M + PD VTYT+
Sbjct: 232 QAAYKLFSEMEAREIVPDSIAFSALICGLSG-SGKVVEADKLFNEMIKKGFEPDEVTYTA 290
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I G+C + +A L +M+ G+ PNVVT+ + D LCK+G++D A+ LL M + G
Sbjct: 291 LIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKG 350
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
++ N YNT+++G C G + +A +L M+ G +Y+ L++ Y K E+ A
Sbjct: 351 LQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKAR 410
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
L EML +G++P VV +N L L ++E +L M G+ + TY + +
Sbjct: 411 ELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQY 470
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
C + + + E++R + D YN LI G
Sbjct: 471 CIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKG 504
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 201/398 (50%), Gaps = 25/398 (6%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLA-KNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
FD +LN + S N+ CL+ K VL +F G+ + +YNIL+N
Sbjct: 62 FDKLLNYGVALS-AGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSL 120
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
++G++ +L R+ P+ V++T++I G C + + L ++++ G +PN+
Sbjct: 121 FRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNL 180
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+TY+++I L ++G VEG +++ +M + PD V
Sbjct: 181 YTYSSIILLLCKSGKV------------------VEG-----EKVLREMMKRGVFPDHVI 217
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT++I GFC + A L EM + + P+ + F+ ++ L +GK+ EA +L + MI
Sbjct: 218 YTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMI 277
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G P+ Y L+DG+C G + +A L M +G T V +Y+ L +G CK+ E++
Sbjct: 278 KKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELD 337
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L EM KG++ ++ YNT+ L + + +A KL +EM+ G+ DT TY T +
Sbjct: 338 TANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLM 397
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D K +V+A EL R + + + +N L++GL
Sbjct: 398 DAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGL 435
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 186/404 (46%), Gaps = 14/404 (3%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ ++ P + +++ + L K+ + + + G+FPD Y LI+ FCK+G
Sbjct: 171 MQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGN 230
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ + + P+++ F++LI GL +++EA LF ++ G EP+ TY
Sbjct: 231 TQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTA 290
Query: 128 LINGLYRTGHTIVALNLFEEM-------------ASGNGEFGVEGFVDKAKELFLQMKDE 174
LI+G + G A L +M A +G G +D A EL +M +
Sbjct: 291 LIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADG-LCKSGELDTANELLHEMCRK 349
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
+ ++ TY +++ G C A + +A L+ EM + G+ P+ +T+ +MD K G+M +A
Sbjct: 350 GLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKA 409
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
LL M+ G++P +N LM+G C++G++ + L M G +Y+ ++
Sbjct: 410 RELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQ 469
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
YC + + +Y M ++G+ PD YN L + ++ A+ L EM
Sbjct: 470 YCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLT 529
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
+Y I G K ++EA +LF +R YN +D
Sbjct: 530 ASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVD 573
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 127/379 (33%), Positives = 190/379 (50%), Gaps = 20/379 (5%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
+IL AKN FKR + GL + + N L++ K+G + V ++R
Sbjct: 97 DILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIR 156
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
P ++F +I GLC ++ +A + ++V G NV TYNTLI+G + G
Sbjct: 157 RRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKI-- 214
Query: 141 ALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
G + KA + +M+ + I P+ VT+ +I GFC + + A
Sbjct: 215 ------------------GKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAM 256
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
+ EM QGV+PNVVT+N +++ LC NGK++EA+ L D M+ ++PN +N L++GF
Sbjct: 257 KVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGF 316
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
C V +A ELF M G T V +Y+ILI+ YCK++ +E A +LY ML KG+ PDV
Sbjct: 317 CKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDV 376
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
YN L L +E A L EM + AD TY ID LC + +A+ L
Sbjct: 377 STYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDE 436
Query: 381 LRILKCELDIRAYNCLIDG 399
+ + YN +IDG
Sbjct: 437 MCRKGLKPSQLTYNTMIDG 455
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 183/374 (48%), Gaps = 26/374 (6%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P + SFNI+ L K + + + + G+ ++ TYN LI+ +CKMG++
Sbjct: 157 RRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGK 216
Query: 71 GF---VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ +L + PN VTF LI G C + + A +F ++ G +PNV TYN+
Sbjct: 217 MYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNS 276
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
LINGL G V++A L QM + + P+++T+ +++
Sbjct: 277 LINGLCNNGK-----------------------VNEATALRDQMVNSCLKPNIITHNALL 313
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
GFC +A L +M QG+ PNV T+N+++D CK+ M++A L +M+ GV
Sbjct: 314 NGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVC 373
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P+ YN L+ G C G + A+ L M++ + +Y+ILI+ C E++ AL L
Sbjct: 374 PDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRL 433
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
EM KG+KP + YNT+ + + A L +M++ G A+ TY I G CK
Sbjct: 434 LDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCK 493
Query: 368 NSYIVEAVELFRTL 381
+ +A L +
Sbjct: 494 KDKLEDANGLLNEM 507
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 164/318 (51%), Gaps = 23/318 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FNIL K+K+ + +F +N G+ P++ TYN LIN C G+V+ +
Sbjct: 234 PNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATAL 293
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ SC PN +T +L+ G C + +A LF + G PNV TYN LI+ +
Sbjct: 294 RDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCK 353
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ A L+ M G G + PDV TY +I G C
Sbjct: 354 DENMEDAFALYRIML-GKG----------------------VCPDVSTYNCLIAGLCRKG 390
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
D A+ L+ EM + ++ +++T+N+++D LC G+M +A RLLD M + G++P+ YN
Sbjct: 391 DLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYN 450
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
T++DG+C G + A L ME +G V +Y++LI G+CK ++E A L EML K
Sbjct: 451 TMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEK 510
Query: 315 GIKPDVVIYNTLFVVLFE 332
G+ P+ + Y + + E
Sbjct: 511 GLIPNRMTYEIVTEEMME 528
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 189/386 (48%), Gaps = 26/386 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V S N L L K + ++K + + P L ++NI+IN CK+G+++ ++
Sbjct: 128 VTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIE 187
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRI---MEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ + N +T+ +LI G C +I +A A+ ++R G PN T+N LI+G
Sbjct: 188 DMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFC 247
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ + A+ +F EM + + P+VVTY S+I G C
Sbjct: 248 KDKNVSAAMKVFAEMNR-----------------------QGVKPNVVTYNSLINGLCNN 284
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
NEA L +M++ ++PN++T N +++ CKN + +A L D M + G+ PN Y
Sbjct: 285 GKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTY 344
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N L+D +C + A L+ M G V +Y+ LI G C+ ++E A +L EM +
Sbjct: 345 NILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDT 404
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
K +K D++ YN L L ++++A +L DEM R G+ TY T IDG CK +
Sbjct: 405 KHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRA 464
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
A+ L + + ++ YN LI G
Sbjct: 465 ALNLRSQMEKVGRLANVATYNVLIKG 490
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 164/348 (47%), Gaps = 26/348 (7%)
Query: 56 NILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV 115
+IL+ + K R GF R + + L+ GL I + ++ ++
Sbjct: 97 DILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIR 156
Query: 116 FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDEN 175
EP + ++N +INGL + G ++KA ++ MK
Sbjct: 157 RRIEPTLISFNIVINGLCKVGK-----------------------LNKAGDIIEDMKVRG 193
Query: 176 INPDVVTYTSVIRGFCYANDWNE---AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 232
++ +V+TY ++I G+C + A +L EM G+ PN VTFN+++D CK+ +
Sbjct: 194 VSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVS 253
Query: 233 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
A ++ M + GV+PN YN+L++G C G+VN A L M + + +++ L+
Sbjct: 254 AAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALL 313
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
NG+CKNK ++ A L+ +M +GI P+V YN L + +E AF L+ M GV
Sbjct: 314 NGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVC 373
Query: 353 ADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D TY I GLC+ + A L + + D+ YN LID L
Sbjct: 374 PDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSL 421
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 137/313 (43%), Gaps = 39/313 (12%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+N + P V ++N L L N + +L ++ ++ L P++ T+N L+N FCK
Sbjct: 262 MNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKM 321
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V + + + TPN T+ LI C + + +A AL+ + G P+V TYN
Sbjct: 322 VKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNC 381
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
LI GL R G A NL EM + +++ D++TY +I
Sbjct: 382 LIAGLCRKGDLEAARNLVSEMDT-----------------------KHLKADLITYNILI 418
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
C + +A LL EM +G++P+ +T+N ++D CK G + A L M ++G
Sbjct: 419 DSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRL 478
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
N YN L+ GFC ++ A L M G +Y I+
Sbjct: 479 ANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTE-------------- 524
Query: 308 YGEMLSKGIKPDV 320
EM+ KG PD+
Sbjct: 525 --EMMEKGFVPDI 535
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 15/160 (9%)
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
N+ + + L+ + R E F G +V S + L++G K EI +Y
Sbjct: 92 NSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVY 151
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
EM+ + I+P ++ +N + L ++ ++ +A + ++M+ GV+A+ TY T IDG CK
Sbjct: 152 KEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKM 211
Query: 369 SYIVEAVELFRTLRILKCELDIRA---------YNCLIDG 399
I ++++ ILK ++RA +N LIDG
Sbjct: 212 GKI---GKMYKADAILK---EMRADGICPNEVTFNILIDG 245
>gi|357498031|ref|XP_003619304.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494319|gb|AES75522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 805
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 139/419 (33%), Positives = 206/419 (49%), Gaps = 53/419 (12%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNK-HYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
F+ ML MR +P + FN + L K K HY TVLSL ++ S G+ PDL+T +ILINC+
Sbjct: 193 FNRMLQMRHTPS-IVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCY 251
Query: 63 C-KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
KMG + PN +T T+LIKGLC ++ EA + G N
Sbjct: 252 YFKMG----------------YEPNTITLTTLIKGLCLNGKVNEALLFHDHVLALGFHLN 295
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFL 169
TY LINGL + G T AL + ++ V + V A L+
Sbjct: 296 HVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTVIDGLCKDKLVIDAYGLYS 355
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M + I P VVT+ +A L EM+ + + PNV TFN+++D LCK+G
Sbjct: 356 EMIVKRIPPTVVTF--------------KAFSLFHEMVLKNINPNVYTFNILVDALCKDG 401
Query: 230 KMDEASRL--------LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
K+ EA + L+L ++ +PN YNTL+DGFC +GR++ A +L M G
Sbjct: 402 KIKEAKNVIIKMVDEALNLFTEMHCKPNTVSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQ 461
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
V +Y+ L++ CKN ++ A++L +GI+PD+ YNTL L + +++ A
Sbjct: 462 PPNVITYNSLLHALCKNHHVDKAIALVNNFKDQGIQPDMHTYNTLVDGLCKQGRLKDAQL 521
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+F ++ G TWTY I+GLC + EA L + C D+ Y +I L
Sbjct: 522 IFQDLLIKGYNLPTWTYNIMINGLCLEGLLDEAETLLSKMEDNGCIPDVVTYQTIIHAL 580
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M + R PP V ++N L L KN H D ++L G+ PD++TYN L++
Sbjct: 452 LLDQMRD-RGQPPNVITYNSLLHALCKNHHVDKAIALVNNFKDQGIQPDMHTYNTLVDGL 510
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK GR+ ++ +L + T+ +I GLC E + EA L +K+ GC P+V
Sbjct: 511 CKQGRLKDAQLIFQDLLIKGYNLPTWTYNIMINGLCLEGLLDEAETLLSKMEDNGCIPDV 570
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEM 148
TY T+I+ L+ A L E+
Sbjct: 571 VTYQTIIHALFEKDENDKAEKLVREL 596
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 198/397 (49%), Gaps = 12/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L K + V SLF + G PD+ TYN LINC+CK ++ F
Sbjct: 322 PDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEY 381
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + PN VT+++LI C E + A LF +R G PN FTY +LI+ +
Sbjct: 382 FSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCK 441
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G+ A L +M + + G + +A+E+F M + I+P+
Sbjct: 442 AGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQV 501
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+++ G+ A +A +L +M + ++P+++ + I+ C K++E +L+ M
Sbjct: 502 YTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMK 561
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ N + T++D + G+ + A F M+ +G T+ +Y +LI+G CK +E
Sbjct: 562 SRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVE 621
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ + MLS G++P+V +Y +L L + + +E A KLFDEMQ G+ D + I
Sbjct: 622 LAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALI 681
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
DG K+ + EA+ L + L E D+ Y L+ G
Sbjct: 682 DGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSG 718
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 131/410 (31%), Positives = 202/410 (49%), Gaps = 15/410 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F M N R + P S N L L+K+ + V F + G+ P ++TYN++I+ C
Sbjct: 242 FSRMRNFR-TLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLC 300
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K G + + + ++ +P+ VT+ SLI G + E A+LF +++ GC P++
Sbjct: 301 KEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDII 360
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQ 170
TYN LIN + A F EM + NG F EG + A +LF+
Sbjct: 361 TYNGLINCYCKFEKMPRAFEYFSEMKN-NGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVD 419
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M+ + P+ TYTS+I C A + EA LL +M+ GV+ N+VT+ ++D LCK G+
Sbjct: 420 MRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGR 479
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
M EA + M++ G+ PN VY L+ G+ R+ A ++ M + Y
Sbjct: 480 MIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGS 539
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+I G+C +++E + EM S+GI + VI T+ F+ + A F EMQ G
Sbjct: 540 IIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVG 599
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
V A TY IDGLCK + AV+ F + L + ++ Y LIDGL
Sbjct: 600 VEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGL 649
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 192/388 (49%), Gaps = 14/388 (3%)
Query: 4 FDYMLNMRPS--PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
F+Y M+ + P V +++ L K + LF + TGL P+ +TY LI+
Sbjct: 379 FEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDA 438
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK G ++ + +L +L++ N VT+T+L+ GLC R++EA +F + G PN
Sbjct: 439 NCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPN 498
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGE-----FGV-------EGFVDKAKELFL 169
Y L++G + A+ + ++M N + +G + +++ K +
Sbjct: 499 QQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILE 558
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+MK I+ + V T++I + A ++A EM D GV+ +VT+ V++D LCK G
Sbjct: 559 EMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAG 618
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
++ A M+ +G++PN VY +L+DG C + AK+LF M+ G T + +++
Sbjct: 619 IVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFT 678
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
LI+G K+ ++ AL L M I+ D+ +Y +L + ++ +A K F+EM
Sbjct: 679 ALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEK 738
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVEL 377
G+ + + K + EA+EL
Sbjct: 739 GILPEEVLCICLLREYYKRGQLDEAIEL 766
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 175/393 (44%), Gaps = 47/393 (11%)
Query: 55 YNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLR 114
+++L + F ++G + R+ P A + L+ L F +
Sbjct: 222 FDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMI 281
Query: 115 VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS---------------GNGEFG--- 156
G P+VFTYN +I+ L + G + LF +M G G+ G
Sbjct: 282 GAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLE 341
Query: 157 --------------------VEGFVD---------KAKELFLQMKDENINPDVVTYTSVI 187
G ++ +A E F +MK+ + P+VVTY+++I
Sbjct: 342 EVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLI 401
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
FC A L ++M G+ PN T+ ++D CK G + EA +LL+ M+Q GV+
Sbjct: 402 DAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVK 461
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
N Y L+DG C GR+ A+E+F SM G + Y+ L++GY K + +E A+ +
Sbjct: 462 LNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKI 521
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
+M IKPD+++Y ++ ++E + +EM+ G++A+ T ID K
Sbjct: 522 LKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFK 581
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+A+ F+ ++ + E I Y LIDGL
Sbjct: 582 AGKSSDALNFFQEMQDVGVEATIVTYCVLIDGL 614
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%)
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
V++ L F G + A E F M + S + L++ K+ + + +M
Sbjct: 221 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 280
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
+ GI P V YN + L + +E + +LF +M+ G++ D TY + IDG K +
Sbjct: 281 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 340
Query: 372 VEAVELFRTLRILKCELDIRAYNCLID 398
E LF ++ + C DI YN LI+
Sbjct: 341 EEVASLFNEMKDVGCVPDIITYNGLIN 367
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 54/134 (40%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + L L KN ++ LF + G+ PD+ + LI+ K G + V+
Sbjct: 637 PNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVL 696
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R+ + +TSL+ G + +A F ++ G P L+ Y+
Sbjct: 697 ISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYK 756
Query: 135 TGHTIVALNLFEEM 148
G A+ L EM
Sbjct: 757 RGQLDEAIELKNEM 770
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 123/382 (32%), Positives = 186/382 (48%), Gaps = 25/382 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S N+L L K + L G PD T+N L+N C+ G + G ++ +
Sbjct: 271 SVNVLVNGLCKEGRIEEALRFI--YEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFM 328
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
L F + T+ SLI GLC I EA + + CEPN TYNTLI L + H
Sbjct: 329 LEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENH- 387
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
V+ A EL + + + PDV T+ S+I+G C ++
Sbjct: 388 ----------------------VEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREI 425
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A L EM ++G P+ T++++++ LC ++ EA LL M G N VYNTL+D
Sbjct: 426 AMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLID 485
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G C RV A+++F ME +G + + +Y+ LING CK+K +E A L +M+ +G+KP
Sbjct: 486 GLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKP 545
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
D Y T+ + ++RA + M +G D TY T I GLCK + A +L
Sbjct: 546 DKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLL 605
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
R++++ L +AYN +I L
Sbjct: 606 RSVQMKGMVLTPQAYNPVIQAL 627
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 187/375 (49%), Gaps = 13/375 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FN L L + H L + + G D+YTYN LI+ CK+G + +
Sbjct: 300 PDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEI 359
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ PN VT+ +LI LC E+ + A L L G P+V T+N+LI GL
Sbjct: 360 LHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCL 419
Query: 135 TGHTIVALNLFEEMASGN---GEFGVEGFVD------KAKELFLQMKDENIN---PDVVT 182
T + +A+ LFEEM EF ++ + KE + +K+ ++ +VV
Sbjct: 420 TSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVV 479
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G C N +A+ + +M GV + VT+N +++ LCK+ +++EA++L+D MI
Sbjct: 480 YNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMI 539
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G++P+ F Y T++ FC G + RA ++ +M GC + +Y LI G CK ++
Sbjct: 540 MEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVD 599
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L + KG+ YN + L + + + A +LF EM G D TY+
Sbjct: 600 VASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVF 659
Query: 363 DGLCK-NSYIVEAVE 376
GLC I EAV+
Sbjct: 660 RGLCNGGGPIQEAVD 674
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 174/368 (47%), Gaps = 25/368 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
I +M++ R P ++N L G L K H + L + L S G+ PD+ T+N LI
Sbjct: 359 ILHHMVS-RDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGL 417
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C + + P+ T++ LI+ LC+E R+ EA L ++ + GC NV
Sbjct: 418 CLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNV 477
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
YNTLI+GL + V A+++F QM+ ++ VT
Sbjct: 478 VVYNTLIDGLCKNNR-----------------------VGDAEDIFDQMEMLGVSRSSVT 514
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G C + EA L+ +M+ +G++P+ T+ ++ C+ G + A+ ++ M
Sbjct: 515 YNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMT 574
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G P+ Y TL+ G C GRV+ A +L S++ G T +Y+ +I CK K +
Sbjct: 575 LNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTK 634
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFE-IHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A+ L+ EM+ KG PDV+ Y +F L ++ A EM G+ + ++
Sbjct: 635 EAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFL 694
Query: 362 IDGLCKNS 369
+GLC S
Sbjct: 695 AEGLCSLS 702
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 133/302 (44%), Gaps = 24/302 (7%)
Query: 116 FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFV-------------D 162
+ P+VF + L+ L R G L L +M S F+
Sbjct: 88 YSAHPSVF--HELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHA 145
Query: 163 KAKELFLQM-KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
+ LFL M +D + PD Y + AN + L +M+ V P+V TFN++
Sbjct: 146 EINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNIL 205
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN---RAKELFVSMES 278
+ LCK ++ A +L+ M G+RP+ + TLM GF V R KEL V
Sbjct: 206 IRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVES-- 263
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
GC T S ++L+NG CK IE AL E +G PD V +N L L +++
Sbjct: 264 -GCELTSVSVNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQ 320
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
++ D M G D +TY + I GLCK I EAVE+ + CE + YN LI
Sbjct: 321 GLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIG 380
Query: 399 GL 400
L
Sbjct: 381 TL 382
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 102/253 (40%), Gaps = 47/253 (18%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IFD M + S V ++N L L K+K + L ++ GL PD +TY ++ F
Sbjct: 499 IFDQMEMLGVSRSSV-TYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYF 557
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ G + ++ + + P+ VT+ +LI GLC R+ A+ L +++ G
Sbjct: 558 CQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTP 617
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV-------------EGFVDKAKELFL 169
YN +I L + T A+ LF EM V G + +A + +
Sbjct: 618 QAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTV 677
Query: 170 QMKDENINPDVVTY---------------------------------TSVIRGFCYANDW 196
+M ++ I P+ ++ TS+IRGF +
Sbjct: 678 EMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRFSQSETSIIRGFLKIQKF 737
Query: 197 NEAKCLLIEMMDQ 209
N+A L ++D+
Sbjct: 738 NDALANLGAILDR 750
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 200/396 (50%), Gaps = 12/396 (3%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP S+N++ L ++ L +F + G+ P+ TYN +I+ K G + GF
Sbjct: 192 PPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFR 251
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ ++L+ PN VT+ L+ GLC R+ E AL ++ + P+ FTY+ L +GL
Sbjct: 252 LRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLT 311
Query: 134 RTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVV 181
RTG + L+LF E G +G V KA+++ + + P
Sbjct: 312 RTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTA 371
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y ++I G+C D A + +M + ++P+ +T+N +++ LCK + EA L+ M
Sbjct: 372 IYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEM 431
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ GV P+ +NTL+D + G++ + + M+ G V S+ ++ +CKN +I
Sbjct: 432 EKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKI 491
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A+++ +M+ K + P+ +YN++ E E+AF L ++M+ GV+A +TY
Sbjct: 492 PEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLL 551
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ GLCKNS I EA EL L D+ +YN +I
Sbjct: 552 LKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTII 587
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 188/405 (46%), Gaps = 14/405 (3%)
Query: 9 NMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV 68
++R P + S N+L L + V + F L + G PD + +N + G +
Sbjct: 115 SVRSPLPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDL 174
Query: 69 SHGFVVLGRILRS--CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+L R+ RS P+A ++ +I GL + +A +F ++ G PN TYN
Sbjct: 175 DEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYN 234
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDE 174
T+I+G + G L ++M + V G +D+ + L +M
Sbjct: 235 TMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSY 294
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
++ PD TY+ + G D L E + +GV T +++++ LCK+GK+ +A
Sbjct: 295 SMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKA 354
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
++L++++ G+ P +YNTL++G+C + A +F M+S +Y+ LING
Sbjct: 355 EQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALING 414
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
CK + I A L EM G+ P V +NTL Q+E+ F + +MQ G+ ++
Sbjct: 415 LCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSN 474
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
++ + + CKN I EAV + + + + YN +ID
Sbjct: 475 VISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDA 519
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 176/374 (47%), Gaps = 16/374 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ILF L + T+LSLF G+ YT +IL+N CK G+V+ V
Sbjct: 298 PDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQV 357
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ + P + +LI G C + A ++F +++ P+ TYN LINGL +
Sbjct: 358 LEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCK 417
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
A +L EM + VE F ++K + M+D+ I +V++
Sbjct: 418 MEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVIS 477
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ SV++ FC EA +L +M+ + V PN +N I+D ++G ++A L++ M
Sbjct: 478 FGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMK 537
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
GV + F YN L+ G C +++ A+EL ++ + G V SY+ +I+ C + +
Sbjct: 538 SSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTD 597
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL L EM I+P + Y+ L L +V L+ M V + Y T
Sbjct: 598 RALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYGTR- 656
Query: 363 DGLCKNSYIVEAVE 376
C+N V +++
Sbjct: 657 ---CENESKVASLK 667
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 91/190 (47%), Gaps = 2/190 (1%)
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
P++ + N++++ L G+ + L++ G RP+ F +N + G ++ A +
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180
Query: 273 FVSM-ESMGCTHT-VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
M S G FSY+++I G ++ + AL ++ EM+ +G+ P+ + YNT+
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGH 240
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
+ +E F+L D+M +DG + TY + GLC+ + E L + D
Sbjct: 241 VKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDG 300
Query: 391 RAYNCLIDGL 400
Y+ L DGL
Sbjct: 301 FTYSILFDGL 310
>gi|296087920|emb|CBI35203.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 131/389 (33%), Positives = 191/389 (49%), Gaps = 69/389 (17%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F ML+M P PPP+ F L +AK KHY TVLSL K+++S G+ PD+YT I+IN F
Sbjct: 53 FHRMLHMHP-PPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSF- 110
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
C +R+ A ++ K+ G +P+
Sbjct: 111 ----------------------------------CHLNRVDFALSVLAKILKLGHQPDTA 136
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
T+ TL+ GL G AL++F++M EGF L M + I+PD+ TY
Sbjct: 137 TFTTLVRGLCVVGKIGEALDVFDKMVG-------EGFQPNPN---LIMIAKGISPDIFTY 186
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
S+I C +W LL EM+ + PNVV+ N+++D LCK GK+ EA ++D+MIQ
Sbjct: 187 NSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQ 246
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
GV P+ Y LMDG CL ++ A ++F M GC V SY+ LIN
Sbjct: 247 GGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLIN---------- 296
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ---RD--------GVA 352
+L+ EM++ G P++V Y+ L L + H++ A L ++ RD G+
Sbjct: 297 --ALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGTARDLFSNLAPRGLQ 354
Query: 353 ADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
D WT+ I GLCK + EA +LFR +
Sbjct: 355 PDVWTHNIMIRGLCKRGLLDEASKLFREM 383
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 131/296 (44%), Gaps = 45/296 (15%)
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKA 164
+A + F ++ P +F + L+ + + H L+L ++M S FG
Sbjct: 48 DALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDS----FG-------- 95
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
I PDV T T VI FC+ N + A +L +++ G QP+ TF ++
Sbjct: 96 -----------IPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRG 144
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
LC GK+ EA + D M+ G +PN + M + G +
Sbjct: 145 LCVVGKIGEALDVFDKMVGEGFQPNPNLI----------------------MIAKGISPD 182
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
+F+Y+ LI+ C E + +L EM+ I P+VV N + L + +V A + D
Sbjct: 183 IFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVD 242
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
M + GV D TY +DG C S + EAV++F + C ++ +YN LI+ L
Sbjct: 243 MMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINAL 298
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 107/217 (49%), Gaps = 11/217 (5%)
Query: 45 STGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 104
+ G+ PD++TYN LI+ C + H +L +++S PN V+ ++ LC E ++
Sbjct: 176 AKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVT 235
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKA 164
EA + + G EP+V TY L++G A+ +F+ M V +
Sbjct: 236 EAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLI 295
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL--IE---------MMDQGVQP 213
LF +M P++VTY+ ++ C + EA LL IE + +G+QP
Sbjct: 296 NALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGTARDLFSNLAPRGLQP 355
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
+V T N+++ LCK G +DEAS+L M + ++ N+
Sbjct: 356 DVWTHNIMIRGLCKRGLLDEASKLFREMDENDIKSNS 392
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/378 (32%), Positives = 194/378 (51%), Gaps = 12/378 (3%)
Query: 35 TVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 94
V+ + R+ S G+ P+L YN +IN CK G V+ ++ ++ S +P+ T+TS+I
Sbjct: 368 AVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMI 427
Query: 95 KGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM------ 148
G C + + A +F ++ GCEPN TY+TLINGL +G A +L EM
Sbjct: 428 LGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGIL 487
Query: 149 ASGNGEFGV------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
+ + G G + A LF+ MK++ P+V TYT++I G C + A L
Sbjct: 488 PTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGL 547
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
M GV PN VT+N +++ L +N ++ A +L+LM + G+ N YN ++ G+C+
Sbjct: 548 FHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCI 607
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G +A + +M G + + +Y+ +I GYC + AL + M G KPD
Sbjct: 608 LGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWS 667
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
Y L +I ++E AF LF+EM DG+ + TY IDG CK+ + A L ++
Sbjct: 668 YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 727
Query: 383 ILKCELDIRAYNCLIDGL 400
C +++ YN LI GL
Sbjct: 728 RSGCRPNVQTYNVLIHGL 745
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 127/384 (33%), Positives = 192/384 (50%), Gaps = 15/384 (3%)
Query: 31 KH-YDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVT 89
KH D+ L +F ++ G P+ TY+ LIN C GRV+ F ++ ++ P A T
Sbjct: 433 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 492
Query: 90 FTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
T I LC +A LF ++ GCEPNV+TY LI+GL +G VA+ LF M
Sbjct: 493 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM- 551
Query: 150 SGNGEFG------------VEGFVDKAKELFLQMKDEN-INPDVVTYTSVIRGFCYANDW 196
S +G F VE K + L + N + ++VTY +I+G+C D
Sbjct: 552 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDP 611
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+A ++ M+ +G N+VT+N I+ C +G A R+LDLM G +P+ + Y L
Sbjct: 612 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 671
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ GFC ++ A LF M G +Y+ LI+GYCK+++++ A SL M G
Sbjct: 672 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 731
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+P+V YN L L + + A +L M +G+ + TY IDGLCKN A+E
Sbjct: 732 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 791
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
+F + C ++ Y+ LI L
Sbjct: 792 MFNKMIEQGCLPNLLTYSSLIRAL 815
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 184/386 (47%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L L + + LF R++ G+FP+ TYN LIN + R+ + FVV
Sbjct: 523 PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 582
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + R+ N VT+ +IKG C +A + + G N+ TYNT+I G
Sbjct: 583 LNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 642
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+G+T AL + + M+D PD +YT +I GFC +
Sbjct: 643 SGNTTSALRILD-----------------------LMRDGGCKPDEWSYTELICGFCKIS 679
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
A L EM+D G+ PN VT+ ++D CK+ K+D A+ LL+ M + G RPN YN
Sbjct: 680 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 739
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ G + A+EL M G V +Y+ +I+G CKN AL ++ +M+ +
Sbjct: 740 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 799
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G P+++ Y++L L + +VE A LF E++R G+ D TY I+ + + A
Sbjct: 800 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 859
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ C+ + Y LI GL
Sbjct: 860 FNFLGRMIKAGCQPTLWTYGVLIKGL 885
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 185/441 (41%), Gaps = 82/441 (18%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N + + + + L + + G PD ++Y LI FCK+ ++ F + +
Sbjct: 632 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 691
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ PN VT+T+LI G C + ++ A +L ++ GC PNV TYN LI+GL + +
Sbjct: 692 VDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNN- 750
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
A+EL M +E I P+VVTYT++I G C +
Sbjct: 751 ----------------------FSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSL 788
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A + +M++QG PN++T++ ++ L + GK++EA L + + G+ P+ Y +++
Sbjct: 789 ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIE 848
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN------------------------- 293
+ ++G+V A M GC T+++Y +LI
Sbjct: 849 AYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSF 908
Query: 294 GY------------CKNKEIEGALS----------------------LYGEMLSKGIKPD 319
GY K E++ LS L G M+S+G+ PD
Sbjct: 909 GYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 968
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
YN+L L + V+ A +F M G Y+ I LC+ EA F
Sbjct: 969 QEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFE 1028
Query: 380 TLRILKCELDIRAYNCLIDGL 400
+ + D LIDGL
Sbjct: 1029 NMLMRTWNPDDVVQAVLIDGL 1049
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 145/342 (42%), Gaps = 58/342 (16%)
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN 152
LIK ++ + + L G +F Y+ L+ L R G T ++ + M S
Sbjct: 321 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLS-- 378
Query: 153 GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
E + P+++ Y +VI C + +A+ ++ ++ + +
Sbjct: 379 ---------------------EGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMS 417
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR---- 268
P+ T+ ++ C+ +D A ++ + M + G PN Y+TL++G C +GRVN
Sbjct: 418 PDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDL 477
Query: 269 -------------------------------AKELFVSMESMGCTHTVFSYSILINGYCK 297
A LFV M++ GC V++Y+ LI+G C
Sbjct: 478 IREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCV 537
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+ ++ A+ L+ M G+ P+ V YN L +L E +++ AF + + M R+G+ + T
Sbjct: 538 SGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVT 597
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
Y I G C +A+ + + ++ YN +I G
Sbjct: 598 YNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKG 639
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 152/365 (41%), Gaps = 41/365 (11%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F+ M++ P V ++ L K++ DT SL + + +G P++ TYN+LI+
Sbjct: 685 FGLFNEMVDDGLCPNEV-TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIH 743
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
K S + ++ PN VT+T++I GLC A +F K+ GC P
Sbjct: 744 GLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLP 803
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELF 168
N+ TY++LI L + G A NLF E+ + + G V+ A
Sbjct: 804 NLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFL 863
Query: 169 LQMKDENINPDVVTYTSVIRG-----------------------FCYANDWNEAKCLL-- 203
+M P + TY +I+G F Y +A ++
Sbjct: 864 GRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSA 923
Query: 204 -IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
+ +D G+ +V N ++ L G+ EA+ LL MI G+ P+ YN+L+
Sbjct: 924 KLAELDPGL--SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLR 981
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
V+ A +F M + GC + Y LI C+ + A + ML + PD V+
Sbjct: 982 VRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVV 1041
Query: 323 YNTLF 327
L
Sbjct: 1042 QAVLI 1046
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 100/211 (47%), Gaps = 1/211 (0%)
Query: 191 CYANDWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
C++ + ++M+ Q G++ + ++ ++ L + G M+ GV+PN
Sbjct: 325 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 384
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
+YN +++ C G V A+ + + + F+Y+ +I G+C+ +++ AL ++
Sbjct: 385 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 444
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
+M +G +P+ V Y+TL L + +V AF L EM G+ T I LC
Sbjct: 445 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 504
Query: 370 YIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+A LF ++ CE ++ Y LI GL
Sbjct: 505 CYEDAWRLFVDMKNKGCEPNVYTYTALISGL 535
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 207/417 (49%), Gaps = 22/417 (5%)
Query: 4 FDYM----LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILI 59
+DY+ +NM SP + SFN++ L K D + +F+ + PD YTY L+
Sbjct: 171 YDYVVNSNMNMNISPNGL-SFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLM 229
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 119
+ CK R+ ++L + +P+ V + LI GLC + + L + + GC
Sbjct: 230 DGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCF 289
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKE 166
PN TYNTLI+GL G A++L E M S NG +D A+
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGAR- 348
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
L + M++ + Y+ +I G EA L +M ++G +PN+V ++ ++D LC
Sbjct: 349 LLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLC 408
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
+ GK +EA +L+ MI G PN + Y++LM GF TG A +++ M+ GC+ F
Sbjct: 409 REGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEF 468
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
YS+LI+G C ++ A+ ++ +ML+ GIKPD V Y+++ L I ++ A KL+ EM
Sbjct: 469 CYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEM 528
Query: 347 ---QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ D TY +DGLC + AV+L + C+ D+ N ++ L
Sbjct: 529 LCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTL 585
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 190/409 (46%), Gaps = 37/409 (9%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M + SP PV +N+L L K V L + G FP+ TYN LI+
Sbjct: 244 LLDEMQSEGCSPSPVI-YNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGL 302
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C G++ +L R++ S PN VT+ +LI GL + R M+ A L + G N
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQ 362
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
Y+ LI+GL++ G A+ L+++MA + EG ++AKE+
Sbjct: 363 HIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNG 422
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M P+V TY+S+++GF EA + EM + G N ++V++D LC G+
Sbjct: 423 MISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGR 482
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM---ESMGCTHTVFS 287
+ EA + M+ IG++P+ Y++++ G C G ++ A +L+ M E V +
Sbjct: 483 VKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVT 542
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT---------------------L 326
Y+IL++G C K++ A+ L ML +G PDV+ NT L
Sbjct: 543 YNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSFLEEL 602
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
L + +V A K+ + M +A T T+ + +CK I A+
Sbjct: 603 VARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEICKPKKINAAI 651
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 176/387 (45%), Gaps = 28/387 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGR 77
SF ++F K + + LF R+ + + ++N ++N G G
Sbjct: 114 SFIVVFRAYGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDY 173
Query: 78 ILRSCF----TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
++ S +PN ++F +IK LC + A +F + C P+ +TY TL++GL
Sbjct: 174 VVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLC 233
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ E +D+A L +M+ E +P V Y +I G C
Sbjct: 234 K-----------------------EERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKK 270
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
D + L+ M +G PN VT+N ++ LC GK+D+A LL+ M+ PN Y
Sbjct: 271 GDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTY 330
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
TL++G R L +SME G YS+LI+G K + E A++L+ +M
Sbjct: 331 GTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAE 390
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG +P++V+Y+ + L + A ++ + M G + +TY + + G K E
Sbjct: 391 KGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEE 450
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A++++R + C + Y+ LIDGL
Sbjct: 451 AIQVWREMDETGCSRNEFCYSVLIDGL 477
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 124/373 (33%), Positives = 192/373 (51%), Gaps = 15/373 (4%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V S N L L K + V ++K + + P+L T+N +IN CK+G+++ V+
Sbjct: 195 VLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVD 254
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRI---MEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ F PN VT+ +LI G C R+ +A A+ ++ PN T+N LI+G
Sbjct: 255 DMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFC 314
Query: 134 RTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVV 181
+ + AL +FEEM S + V EG +++AK L +M N+ P+V+
Sbjct: 315 KDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVI 374
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY ++I G+C EA+ L + QG+ PNV+TFN ++ CK GKM+EA L +M
Sbjct: 375 TYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVM 434
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++ G PNA YN L+ GFC G++ K L M+ G +Y+ILI+ +C+ KE
Sbjct: 435 LEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEP 494
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A L EML KG+KP + YN L + A L +M+++G A+ TY
Sbjct: 495 KKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVL 554
Query: 362 IDGLCKNSYIVEA 374
I G C+ + +A
Sbjct: 555 IQGYCRKGKLEDA 567
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 118/375 (31%), Positives = 186/375 (49%), Gaps = 22/375 (5%)
Query: 27 LAKNKHYDTVLSL--FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFT 84
LA ++ TVL L FKR + + N L++ K V ++R +
Sbjct: 168 LAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKIS 227
Query: 85 PNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNL 144
PN +TF ++I GLC ++ +A + ++V+G PNV TYNTLI+G + G
Sbjct: 228 PNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRV------ 281
Query: 145 FEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
G + KA + +M + ++P+ VT+ +I GFC + + A +
Sbjct: 282 --------------GKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFE 327
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
EM QG++P VVT+N +++ LC GK++EA LLD M+ ++PN YN L++G+C
Sbjct: 328 EMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKK 387
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
+ A+ELF ++ G T V +++ L++GYCK ++E A L ML KG P+ YN
Sbjct: 388 LLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYN 447
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
L V ++E L +EMQ GV ADT TY I C+ +A L +
Sbjct: 448 CLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDK 507
Query: 385 KCELDIRAYNCLIDG 399
+ YN L++G
Sbjct: 508 GLKPSHLTYNILLNG 522
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 187/376 (49%), Gaps = 15/376 (3%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P + +FN + L K + + + G +P++ TYN LI+ +CKMGRV
Sbjct: 224 RKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGK 283
Query: 71 GF---VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ +L ++ + +PN+VTF LI G C + + A +F +++ G +P V TYN+
Sbjct: 284 MYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNS 343
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDEN 175
L+NGL G A L +EM S N + V + +++A+ELF + +
Sbjct: 344 LVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQG 403
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+ P+V+T+ +++ G+C EA L M+++G PN T+N ++ C+ GKM+E
Sbjct: 404 LTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVK 463
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
LL+ M GV+ + YN L+ +C +A L M G + +Y+IL+NGY
Sbjct: 464 NLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGY 523
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
C + AL+L +M +G +VV YN L ++E A L +EM G+ +
Sbjct: 524 CMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNR 583
Query: 356 WTYRTFIDGLCKNSYI 371
TY + + + ++
Sbjct: 584 TTYEIIKEEMMEKGFL 599
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 107/333 (32%), Positives = 170/333 (51%), Gaps = 30/333 (9%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
I M+ + SP V +FN+L K+++ L +F+ + S GL P + TYN L+N
Sbjct: 290 ILKEMVENKVSPNSV-TFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGL 348
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C G+++ V+L +L S PN +T+ +LI G C + + EA LF + G PNV
Sbjct: 349 CNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNV 408
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMK---DENINPD 179
T+NTL++G + G K +E FL K ++ P+
Sbjct: 409 ITFNTLLHGYCKFG--------------------------KMEEAFLLQKVMLEKGFLPN 442
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
TY +I GFC E K LL EM +GV+ + VT+N+++ C+ + +A+RL+D
Sbjct: 443 ASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLID 502
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M+ G++P+ YN L++G+C+ G + A L ME G V +Y++LI GYC+
Sbjct: 503 EMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKG 562
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
++E A L EML KG+ P+ Y + + E
Sbjct: 563 KLEDANGLLNEMLEKGLIPNRTTYEIIKEEMME 595
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 66/122 (54%), Gaps = 3/122 (2%)
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL---FVVLFEIHQVER 338
+ + +++ +ING CK ++ A + +M G P+VV YNTL + + + ++ +
Sbjct: 227 SPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYK 286
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A + EM + V+ ++ T+ IDG CK+ + A+++F ++ + + YN L++
Sbjct: 287 ADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVN 346
Query: 399 GL 400
GL
Sbjct: 347 GL 348
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 12/204 (5%)
Query: 203 LIEMMDQG-VQPNVVT--FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
L ++M G V P +V FN EL N ++ RLL+L+ P +++D
Sbjct: 76 LHQLMGSGDVDPLLVLRYFNWSRRELNVNYSIELICRLLNLLANAKHYPKI---RSILDS 132
Query: 260 FCLTGRVNRAKELFVSMESMG----CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
F + G N + L S+ C +++ + +L+ Y +N + L +
Sbjct: 133 F-VKGETNCSISLIFHSLSVCSGQFCANSIIA-DMLVLAYVENSKTVLGLEAFKRAGDYR 190
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
K V+ N L L + ++ ++ EM R ++ + T+ T I+GLCK + +A
Sbjct: 191 YKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAG 250
Query: 376 ELFRTLRILKCELDIRAYNCLIDG 399
++ +++ ++ YN LIDG
Sbjct: 251 DVVDDMKVWGFWPNVVTYNTLIDG 274
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/482 (28%), Positives = 214/482 (44%), Gaps = 85/482 (17%)
Query: 4 FDYMLNMRP-SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFP------------ 50
F + L P S P S N L L K KHYD V+S+ ++ S +FP
Sbjct: 45 FHHTLQDYPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESF 104
Query: 51 -----------------------DLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNA 87
++Y +N+L+ FC+ G + + R+C P+
Sbjct: 105 VNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDC 164
Query: 88 VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
V++ ++I GLC R++EA LF +++ C+PN T++ LI+G + G L EE
Sbjct: 165 VSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEE 224
Query: 148 MASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M E F +G +++ KELF +M +N+ P+VVTY+ ++ C
Sbjct: 225 MEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQK 284
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W EA +L M V+P+VV + V+ D L KNG+ +A ++LDLM++ G PN YN
Sbjct: 285 WKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNA 344
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK- 314
+++G C GRV+ A + +M G V +YS L+ G C +I+ A+ L ++SK
Sbjct: 345 IINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKE 404
Query: 315 -GIKPDV-----------------------------------VIYNTLFVVLFEIHQVER 338
IKPDV V YN L ++ +
Sbjct: 405 FHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTK 464
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A +L+ + G++ + TY I+GLCK + A LF R + YN L+
Sbjct: 465 ALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMA 524
Query: 399 GL 400
L
Sbjct: 525 SL 526
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 178/374 (47%), Gaps = 14/374 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F+ L KN + L + + GL D++ Y+ LI+ FC G + G +
Sbjct: 197 PNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKEL 256
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+LR TPN VT++ L+ LC + + EAA + + P+V Y L +GL +
Sbjct: 257 FNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSK 316
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
G A+ + + M E EG VD A + M + PDVVT
Sbjct: 317 NGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVT 376
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQ--GVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
Y+++++G C +EA LL +M + ++P+V FN+++ ELCK ++ A R+
Sbjct: 377 YSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYT 436
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M++ G N YN L+DG+ G++ +A EL+ G + +Y++LING CK +
Sbjct: 437 MVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQM 496
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ A L+ + + G +P V YNTL L VE+A LF EM+ D ++
Sbjct: 497 LSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNI 556
Query: 361 FIDGLCKNSYIVEA 374
IDG K + A
Sbjct: 557 IIDGTLKAGDVESA 570
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 176/384 (45%), Gaps = 24/384 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ ML + P V +++ L L K + + + + + PD+ Y +L +
Sbjct: 256 LFNEMLR-KNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGL 314
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K GR S VL +++ PN VT+ ++I GLC E R+ +A + + G +P+V
Sbjct: 315 SKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDV 374
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TY+TL+ GL G A++L L K+ +I PDV
Sbjct: 375 VTYSTLVKGLCGVGKIDEAVDLLN---------------------LLMSKEFHIKPDVFA 413
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ VI+ C AK + M+++G N+VT+N+++D GK+ +A L +
Sbjct: 414 FNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAV 473
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ PNA Y L++G C ++ AK LF + G TV Y+ L+ C+ +E
Sbjct: 474 DSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVE 533
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A +L+ EM + PDVV +N + + VE A +L EM + D T+ I
Sbjct: 534 QARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILI 593
Query: 363 DGLCKNSYIVEAVELFRTLRILKC 386
+ K + EA L+ R++ C
Sbjct: 594 NRFLKLGQLDEAASLYE--RMVSC 615
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 166/391 (42%), Gaps = 54/391 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ +L L+KN + + + G P+ TYN +IN CK GRV +
Sbjct: 302 PDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGI 361
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGCEPNVF--------- 123
L + + P+ VT+++L+KGLC +I EA L L + F +P+VF
Sbjct: 362 LETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQEL 421
Query: 124 --------------------------TYNTLINGLYRTGHTIVALNLFEEMASG------ 151
TYN LI+G G AL L+++
Sbjct: 422 CKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNA 481
Query: 152 -------NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
NG ++ + AK LF + + P V Y +++ C + +A+ L
Sbjct: 482 ATYTVLINGLCKMQ-MLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQ 540
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
EM + P+VV+FN+I+D K G ++ A LL M+ + + P+ ++ L++ F G
Sbjct: 541 EMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLG 600
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
+++ A L+ M S G + L+ GY + E +S+ +M K + D + +
Sbjct: 601 QLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTS 660
Query: 325 TLFVVLFEIHQ---VERAFKLFDEMQRDGVA 352
T+ L + + +E+ F + G +
Sbjct: 661 TILACLCNMSKDVDIEKILPKFSQHTSVGAS 691
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/399 (31%), Positives = 204/399 (51%), Gaps = 14/399 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + N L LA++++Y S+++R+ + P + + LI CF + GF V
Sbjct: 72 PSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGV 131
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+G +L+ FT N ++KGLC + EA L ++ P++ +YNTLINGL +
Sbjct: 132 VGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCK 191
Query: 135 TGHTIVALNLFEEM-ASGNGEFGV-----------EGFVDKAKELFLQMKDENINPDVVT 182
A+ L EM A+G V +G +D+A EL MK + + DVV
Sbjct: 192 AKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVL 251
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I GFC + + K L EM+ +G+ NVVT++ ++ LC+ G+ EA+ +L+ M
Sbjct: 252 YGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMA 311
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ P+ Y L+DG C GR A +L M G + +Y++L++G CK +
Sbjct: 312 EHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVI 371
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM--QRDGVAADTWTYRT 360
A + M+ KG K DVV YNTL L + +V+ A KLF+ M + + + +T+
Sbjct: 372 DAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNM 431
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I GLCK + +AV++ R + ++ YN L+ G
Sbjct: 432 LIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGG 470
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 174/380 (45%), Gaps = 14/380 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L L K+ + L + G P TYN+L++ CK G V F +
Sbjct: 317 PDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKI 376
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGC-EPNVFTYNTLINGL 132
L ++ + VT+ +L+KGLC + ++ EA LF + C EPNVFT+N LI GL
Sbjct: 377 LRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGL 436
Query: 133 YRTGHTIVALNLFEEM----ASGN--------GEFGVEGFVDKAKELFLQMKDENINPDV 180
+ G A+ + +M + GN G G + +A EL+ Q+ D P+
Sbjct: 437 CKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNS 496
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
TY+ +I GFC N AK L EM G+ P + +N +M LCK G +++A L
Sbjct: 497 FTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQE 556
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M P+ +NT++DG G KEL + M MG ++S LIN K E
Sbjct: 557 MGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGE 616
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
++ A S M++ G PD ++Y++L L L +M G D T
Sbjct: 617 LDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVST 676
Query: 361 FIDGLCKNSYIVEAVELFRT 380
+ LC + V+ +EL T
Sbjct: 677 ILTCLCHSIQEVDVMELLPT 696
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 187/409 (45%), Gaps = 15/409 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD ML S V +++ L L + + ++ + G+ PD+ TY LI+
Sbjct: 271 LFDEMLGKGISAN-VVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGL 329
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK GR +H +L ++ P+ VT+ L+ GLC E +++A + + G + +V
Sbjct: 330 CKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADV 389
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN--------------GEFGVEGFVDKAKELF 168
TYNTL+ GL G AL LF M G EG + KA ++
Sbjct: 390 VTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIH 449
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+M + ++VTY ++ G A EA L +++D G PN T+++++D CK
Sbjct: 450 RKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKM 509
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
++ A L M G+ P F YNTLM C G + +AK LF M + C + S+
Sbjct: 510 RMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISF 569
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ +I+G K + + L +M+ G++PD + ++TL L ++ +++ A + M
Sbjct: 570 NTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVA 629
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
G D Y + + GL E + L + LD + + ++
Sbjct: 630 SGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTIL 678
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 113/276 (40%), Gaps = 47/276 (17%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FN+L G L K + + +++ G +L TYN+L+ K G++ +
Sbjct: 424 PNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMEL 483
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++L F PN+ T++ LI G C + A LF ++R G P +F YNTL+ L +
Sbjct: 484 WKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCK 543
Query: 135 TGHTIVALNLFEEMASGN------------------GEFG---------VE--------- 158
G A +LF+EM + N G+F VE
Sbjct: 544 EGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALT 603
Query: 159 -----------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
G +D+AK +M PD + Y S+++G D E LL +M
Sbjct: 604 FSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMA 663
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
+G + + I+ LC + + + LL Q
Sbjct: 664 AKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQ 699
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 4/161 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + SFN + K + V L ++ GL PD T++ LIN K+G +
Sbjct: 564 PDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSA 623
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R++ S FTP+A+ + SL+KGL ++ E L ++ G + +T++ L
Sbjct: 624 LERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCH 683
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDEN 175
+ + + L G EG EL +Q+ +
Sbjct: 684 SIQEVDVMELLPTFFQGTS----EGASISCNELLMQLHQSH 720
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/384 (30%), Positives = 200/384 (52%), Gaps = 26/384 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V S+N+L K+ + L + R+ G+ P+ TY+ ++ C G++ VLG
Sbjct: 149 VTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLG 205
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
R L+S P+ VT T LI C ES + +A LF ++R GC+P+V TYN LI G + G
Sbjct: 206 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGG 265
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
A+ +++ S +G + PDV+++ ++R C W
Sbjct: 266 RLDEAIRFLKKLPS----YGCQ-------------------PDVISHNMILRSLCSGGRW 302
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+A LL M+ +G P+VVTFN++++ LC+ G + +A +L++M + G PN+ +N L
Sbjct: 303 MDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPL 362
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ GFC ++RA E M S GC + +Y+IL+ CK+ +++ A+ + ++ SKG
Sbjct: 363 IQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGC 422
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
P ++ YNT+ L ++ + E A +L +EM G+ D T + + GL + + EA++
Sbjct: 423 SPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMK 482
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
F L+ + YN +I GL
Sbjct: 483 FFHYLKRFAIRPNAFIYNSIITGL 506
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 171/361 (47%), Gaps = 12/361 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + +L K + LF + + G PD+ TYN+LI FCK GR+
Sbjct: 214 PDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRF 273
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+ ++ +++ LC+ R M+A L + GC P+V T+N LIN L +
Sbjct: 274 LKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQ 333
Query: 135 TGHTIVALNLFEEMAS-----GNGEFG--VEGF-----VDKAKELFLQMKDENINPDVVT 182
G ALN+ E M + F ++GF +D+A E M PD+VT
Sbjct: 334 KGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVT 393
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++ C ++A +L ++ +G P+++++N ++D L K GK + A LL+ M
Sbjct: 394 YNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMC 453
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G++P+ +++ G G+V A + F ++ F Y+ +I G CK+++
Sbjct: 454 YKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTS 513
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ +M++KG KP Y TL + E A KL +E+ G+ + + +
Sbjct: 514 LAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLVKRSLVEKVSL 573
Query: 363 D 363
+
Sbjct: 574 E 574
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 122/240 (50%), Gaps = 3/240 (1%)
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
G +++ M ++ +PDV+ T++IR FC A ++ + + G +V ++
Sbjct: 93 GELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSY 152
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
NV++ CK+G+++EA R+LD M GV PNA Y+ ++ C G++ +A ++
Sbjct: 153 NVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQ 209
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
C V + ++LI+ CK + A+ L+ EM +KG KPDVV YN L + +++
Sbjct: 210 SKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDE 269
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A + ++ G D ++ + LC ++A++L T+ C + +N LI+
Sbjct: 270 AIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILIN 329
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 91/178 (51%), Gaps = 3/178 (1%)
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
+ L +NG+++E SR L+ M G P+ L+ FC GR A ++ +E G
Sbjct: 86 LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
V SY++LI+GYCK+ EIE AL + M G+ P+ Y+ + L + ++++A +
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQ 202
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + D T ID CK S + +A++LF +R C+ D+ YN LI G
Sbjct: 203 VLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKG 260
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 192/386 (49%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S N L AK D V FK + G P ++TYNI+I+C CK G V +
Sbjct: 93 PKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGL 152
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ P+ VT+ S+I G R+ + F +++ CEP+V TYN LIN +
Sbjct: 153 FEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCK 212
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G + L + EM GNG + P+VV+Y++++ FC
Sbjct: 213 FGKLPIGLEFYREM-KGNG----------------------LKPNVVSYSTLVDAFCKEG 249
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+A ++M G+ PN T+ ++D CK G + +A RL + M+Q+GV N Y
Sbjct: 250 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYT 309
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DG C R+ A+ELF M++ G + SY+ LI+G+ K K ++ AL L E+ +
Sbjct: 310 ALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 369
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
GIKPD+++Y T L + ++E A + +EM+ G+ A++ Y T +D K+ E
Sbjct: 370 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEG 429
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ L ++ L E+ + + LIDGL
Sbjct: 430 LHLLDEMKELDIEVTVVTFCVLIDGL 455
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 202/399 (50%), Gaps = 13/399 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N + K D + F+ + PD+ TYN LINCFCK G++ G
Sbjct: 163 PDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEF 222
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + PN V++++L+ C E + +A + +R G PN +TY +LI+ +
Sbjct: 223 YREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCK 282
Query: 135 TGHTIVALNLFEEMASGNGEFGV-------EGFVD-----KAKELFLQMKDENINPDVVT 182
G+ A L EM E+ V +G D +A+ELF +M + P++ +
Sbjct: 283 IGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS 342
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I GF A + + A LL E+ +G++P+++ + + LC K++ A +++ M
Sbjct: 343 YNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMK 402
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G++ N+ +Y TLMD + +G L M+ + TV ++ +LI+G CKNK +
Sbjct: 403 ECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVS 462
Query: 303 GALSLYGEMLSK-GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A+ + + + G++ + I+ + L + +QVE A LF++M + G+ D Y +
Sbjct: 463 KAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSL 522
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+DG K ++EA+ L + + +LD+ AY L+ GL
Sbjct: 523 MDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGL 561
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 183/377 (48%), Gaps = 15/377 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S++ L K + + + GL P+ YTY LI+ CK+G +S F +
Sbjct: 233 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 292
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+L+ N VT+T+LI GLC R+ EA LF K+ G PN+ +YN LI+G +
Sbjct: 293 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 352
Query: 135 TGHTIVALNLFEEMASGN--------GEFGVEGF-----VDKAKELFLQMKDENINPDVV 181
+ AL L E+ G F + G ++ AK + +MK+ I + +
Sbjct: 353 AKNMDRALELLNELKGRGIKPDLLLYGTF-IWGLCSLEKIEAAKVVMNEMKECGIKANSL 411
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
YT+++ + + + E LL EM + ++ VVTF V++D LCKN + +A + +
Sbjct: 412 IYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRI 471
Query: 242 I-QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
G++ NA ++ ++DG C +V A LF M G +Y+ L++G K
Sbjct: 472 SNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGN 531
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ AL+L +M G+K D++ Y +L L +Q+++A +EM +G+ D +
Sbjct: 532 VLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCIS 591
Query: 361 FIDGLCKNSYIVEAVEL 377
+ + I EAVEL
Sbjct: 592 VLKKHYELGCIDEAVEL 608
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 128/242 (52%)
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
G +++A + F +MK + P + ++ F ++ K +M+ G +P V T+
Sbjct: 74 GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY 133
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
N+++D +CK G ++ A L + M G+ P+ YN+++DGF GR++ F M+
Sbjct: 134 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 193
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
M C V +Y+ LIN +CK ++ L Y EM G+KP+VV Y+TL + +++
Sbjct: 194 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 253
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A K + +M+R G+ + +TY + ID CK + +A L + + E ++ Y LID
Sbjct: 254 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 313
Query: 399 GL 400
GL
Sbjct: 314 GL 315
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 89/187 (47%)
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
P F+ + L G ++EA + M + V P N L+ F G+ + K
Sbjct: 58 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 117
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
F M G TVF+Y+I+I+ CK ++E A L+ EM +G+ PD V YN++ +
Sbjct: 118 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 177
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
+ +++ F+EM+ D TY I+ CK + +E +R ++ + ++ +
Sbjct: 178 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 237
Query: 393 YNCLIDG 399
Y+ L+D
Sbjct: 238 YSTLVDA 244
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 111/278 (39%), Gaps = 50/278 (17%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S+N L K K+ D L L L G+ PDL Y I C + ++ VV
Sbjct: 338 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 397
Query: 75 LGRILRSCFTPNA-----------------------------------VTFTSLIKGLCA 99
+ + N+ VTF LI GLC
Sbjct: 398 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 457
Query: 100 ESRIMEAAALFTKLR-VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG------- 151
+ +A F ++ FG + N + +I+GL + A LFE+M
Sbjct: 458 NKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRT 517
Query: 152 ------NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
+G F +G V +A L +M + + D++ YTS++ G + N +A+ L E
Sbjct: 518 AYTSLMDGNFK-QGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEE 576
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
M+ +G+ P+ V ++ + + G +DEA L +++
Sbjct: 577 MIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMK 614
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 192/386 (49%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S N L AK D V FK + G P ++TYNI+I+C CK G V +
Sbjct: 225 PKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGL 284
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ P+ VT+ S+I G R+ + F +++ CEP+V TYN LIN +
Sbjct: 285 FEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCK 344
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G + L + EM GNG + P+VV+Y++++ FC
Sbjct: 345 FGKLPIGLEFYREM-KGNG----------------------LKPNVVSYSTLVDAFCKEG 381
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+A ++M G+ PN T+ ++D CK G + +A RL + M+Q+GV N Y
Sbjct: 382 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYT 441
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DG C R+ A+ELF M++ G + SY+ LI+G+ K K ++ AL L E+ +
Sbjct: 442 ALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 501
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
GIKPD+++Y T L + ++E A + +EM+ G+ A++ Y T +D K+ E
Sbjct: 502 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEG 561
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ L ++ L E+ + + LIDGL
Sbjct: 562 LHLLDEMKELDIEVTVVTFCVLIDGL 587
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 204/406 (50%), Gaps = 13/406 (3%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P ++N + K D + F+ + PD+ TYN LINCFCK G+
Sbjct: 288 MKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 347
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ G + + PN V++++L+ C E + +A + +R G PN +TY +
Sbjct: 348 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 407
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGV-------EGFVD-----KAKELFLQMKDEN 175
LI+ + G+ A L EM E+ V +G D +A+ELF +M
Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 467
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+ P++ +Y ++I GF A + + A LL E+ +G++P+++ + + LC K++ A
Sbjct: 468 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAK 527
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+++ M + G++ N+ +Y TLMD + +G L M+ + TV ++ +LI+G
Sbjct: 528 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 587
Query: 296 CKNKEIEGALSLYGEMLSK-GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
CKNK + A+ + + + G++ + I+ + L + +QVE A LF++M + G+ D
Sbjct: 588 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 647
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Y + +DG K ++EA+ L + + +LD+ AY L+ GL
Sbjct: 648 RTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGL 693
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 183/376 (48%), Gaps = 13/376 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S++ L K + + + GL P+ YTY LI+ CK+G +S F +
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+L+ N VT+T+LI GLC R+ EA LF K+ G PN+ +YN LI+G +
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 135 TGHTIVALNLFEEMAS----------GNGEFGVEGF--VDKAKELFLQMKDENINPDVVT 182
+ AL L E+ G +G+ ++ AK + +MK+ I + +
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 544
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+++ + + + E LL EM + ++ VVTF V++D LCKN + +A + +
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 604
Query: 243 -QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
G++ NA ++ ++DG C +V A LF M G +Y+ L++G K +
Sbjct: 605 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
AL+L +M G+K D++ Y +L L +Q+++A +EM +G+ D +
Sbjct: 665 LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISV 724
Query: 362 IDGLCKNSYIVEAVEL 377
+ + I EAVEL
Sbjct: 725 LKKHYELGCIDEAVEL 740
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 128/242 (52%)
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
G +++A + F +MK + P + ++ F ++ K +M+ G +P V T+
Sbjct: 206 GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY 265
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
N+++D +CK G ++ A L + M G+ P+ YN+++DGF GR++ F M+
Sbjct: 266 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 325
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
M C V +Y+ LIN +CK ++ L Y EM G+KP+VV Y+TL + +++
Sbjct: 326 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 385
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A K + +M+R G+ + +TY + ID CK + +A L + + E ++ Y LID
Sbjct: 386 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 445
Query: 399 GL 400
GL
Sbjct: 446 GL 447
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 89/187 (47%)
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
P F+ + L G ++EA + M + V P N L+ F G+ + K
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
F M G TVF+Y+I+I+ CK ++E A L+ EM +G+ PD V YN++ +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
+ +++ F+EM+ D TY I+ CK + +E +R ++ + ++ +
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 393 YNCLIDG 399
Y+ L+D
Sbjct: 370 YSTLVDA 376
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 111/278 (39%), Gaps = 50/278 (17%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S+N L K K+ D L L L G+ PDL Y I C + ++ VV
Sbjct: 470 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 529
Query: 75 LGRILRSCFTPNA-----------------------------------VTFTSLIKGLCA 99
+ + N+ VTF LI GLC
Sbjct: 530 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 589
Query: 100 ESRIMEAAALFTKLR-VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG------- 151
+ +A F ++ FG + N + +I+GL + A LFE+M
Sbjct: 590 NKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRT 649
Query: 152 ------NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
+G F +G V +A L +M + + D++ YTS++ G + N +A+ L E
Sbjct: 650 AYTSLMDGNFK-QGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEE 708
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
M+ +G+ P+ V ++ + + G +DEA L +++
Sbjct: 709 MIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMK 746
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 202/408 (49%), Gaps = 19/408 (4%)
Query: 10 MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFK-RLNSTGLFPDLYTYNILINCFCKMGRV 68
+R S V +NI+ L + L +F+ + G+ P + TYN +IN CK +
Sbjct: 38 VRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNEL 97
Query: 69 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTL 128
G + +++ P+ VT+ +LI LC + EA L + GC PNV TY+ L
Sbjct: 98 GAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVL 157
Query: 129 INGLYRTGHTIVALNLFEEMASGNGE-----FGVEGFVD---------KAKELFLQMKDE 174
INGL + G A L +EM + + F+D +A EL ++D
Sbjct: 158 INGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDG 217
Query: 175 N--INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 232
+ ++PD VT++++I G C +EA +M+ G PNVVT+N +++ LCK KM+
Sbjct: 218 SLRVSPDTVTFSTLIDGLCKCGQTDEA--CNDDMIAGGYVPNVVTYNALVNGLCKADKME 275
Query: 233 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
A +++ M+ GV P+ Y+ L+D FC RV+ A EL M S GCT V +++ +I
Sbjct: 276 RAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSII 335
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
+G CK+ A + ++ ++ + PD V +N L + E+A LF+EM +
Sbjct: 336 DGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQ 395
Query: 353 ADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D T+ IDGLCK + A ++ + L ++ YN L+ GL
Sbjct: 396 PDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGL 443
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 127/406 (31%), Positives = 204/406 (50%), Gaps = 18/406 (4%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V ++N L L K + L ++S G P++ TY++LIN CK+GR+
Sbjct: 110 RGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDE 169
Query: 71 GFVVLGRILR-SC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKLR--VFGCEPNVFTYN 126
++ + R SC PN +T+ S + GLC +S EA L LR P+ T++
Sbjct: 170 ARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFS 229
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDE 174
TLI+GL + G T A N ++M +G V + +++A + M D+
Sbjct: 230 TLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDK 287
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
+ PDV+TY+ ++ FC A+ +EA LL M +G PNVVTFN I+D LCK+ + EA
Sbjct: 288 GVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEA 347
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
++ + + P+ +N L+ G C G +A LF M + V ++ LI+G
Sbjct: 348 FQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDG 407
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
CK ++E A + M + G+ P+VV YN L L + ++E + +EM G +
Sbjct: 408 LCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPE 467
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ TY + + LC+ S +A++L L+ + D YN L+DGL
Sbjct: 468 SMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGL 513
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 195/398 (48%), Gaps = 16/398 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N + L K+ + LF+ L G PD+ TYN LI+ CK G + +
Sbjct: 79 PTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRL 138
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE--PNVFTYNTLINGL 132
G + PN VT++ LI GLC RI EA L ++ C+ PN+ TYN+ ++GL
Sbjct: 139 HGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGL 198
Query: 133 YRTGHTIVALNLFEEMASGNGEFG---------VEGFVDKAKELFLQMKDENIN----PD 179
+ T A L + G+ ++G K + D+ I P+
Sbjct: 199 CKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLC-KCGQTDEACNDDMIAGGYVPN 257
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
VVTY +++ G C A+ A ++ M+D+GV P+V+T++V++D CK ++DEA LL
Sbjct: 258 VVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLH 317
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M G PN +N+++DG C + R A ++ + + + +++ILI G CK
Sbjct: 318 GMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAG 377
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
E A +L+ EM++K ++PDV+ + L L + QVE A + D M GV + TY
Sbjct: 378 NFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYN 437
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ GLCK+ I E E + C + Y L+
Sbjct: 438 VLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLV 475
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 188/373 (50%), Gaps = 26/373 (6%)
Query: 9 NMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV 68
++R SP V +F+ L L K D + + + G P++ TYN L+N CK ++
Sbjct: 218 SLRVSPDTV-TFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKM 274
Query: 69 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTL 128
++ ++ TP+ +T++ L+ C SR+ EA L + GC PNV T+N++
Sbjct: 275 ERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSI 334
Query: 129 INGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
I+GL ++ + GE A ++ LQ+ + + PD VT+ +I
Sbjct: 335 IDGLCKSDRS--------------GE---------AFQIALQVYNRMLVPDKVTFNILIA 371
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
G C A ++ +A L EM+ + +QP+V+TF ++D LCK G+++ A +LDLM +GV P
Sbjct: 372 GACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPP 431
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
N YN L+ G C +GR+ E M S GC +Y L+ C+ + AL L
Sbjct: 432 NVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLV 491
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
++ S G PD V YN L L++ + E+A + +EM G D++T+ GL ++
Sbjct: 492 SKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRS 551
Query: 369 SYIVEAVELFRTL 381
+ +EL R +
Sbjct: 552 GNLAGTMELLRVV 564
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 211/447 (47%), Gaps = 49/447 (10%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
C + + + PP V ++N + L K + D + +++ G+ PD TYN LI+
Sbjct: 231 CDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHG 290
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
+ +G+ + + PN VT ++ + LC RI EA F + G + N
Sbjct: 291 YSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLN 350
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELF 168
+ +Y+TL++G G + NLF M NG + G V +A +F
Sbjct: 351 IISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNG-YAKCGMVREAMFIF 409
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN-------------- 214
M+ +NPDV+TY +VI FC ++A M+D+GV+PN
Sbjct: 410 EDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTH 469
Query: 215 ---------------------VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+++F +++ LCK G++ EA R+ D++I+ G + + ++
Sbjct: 470 GDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIF 529
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
+L+DG+CL G+++ A + +M S+G + +Y L+NG CKN I+ L L+ E+L
Sbjct: 530 TSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLH 589
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG+KP Y + LF + A ++F EM G+A TY + GLC+N+ E
Sbjct: 590 KGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEE 649
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A+ +F+ L + + DI N +I +
Sbjct: 650 AITVFQKLCAMNVKFDIVILNIMISKM 676
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 191/383 (49%), Gaps = 19/383 (4%)
Query: 36 VLSLFKRLNS-TG---LFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 91
++LF R+++ TG P +YTY+ILI+C C+ R+ F G +LR + + +
Sbjct: 83 AVALFNRMSTGTGPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVS 142
Query: 92 SLIKGLCAESRIMEAA-ALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS 150
SL++GLC R EA LF ++ GC P+ +Y+T++ + G + AL++
Sbjct: 143 SLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVK 202
Query: 151 GNGE------------FGV--EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
G G+ EG V +A +LF +M + + P+VVTY SVI C A
Sbjct: 203 QGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAV 262
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
++A+ +L +M+ GVQP+ VT+N ++ G+ +A R+ M GV PN +T
Sbjct: 263 DKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTF 322
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ C GR+ A+E F SM + G + SYS L++GY + +L+ M+ GI
Sbjct: 323 VAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGI 382
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
P+ ++N L + V A +F++MQ+ G+ D TY I C+ + +A++
Sbjct: 383 VPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMD 442
Query: 377 LFRTLRILKCELDIRAYNCLIDG 399
F + E + Y CLI G
Sbjct: 443 KFNHMIDKGVEPNFAVYQCLIQG 465
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 174/362 (48%), Gaps = 23/362 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FNIL AK + +F+ + GL PD+ TY +I+ FC+MG + ++
Sbjct: 389 FNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMI 448
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
PN + LI+G C +++A L ++R G P + ++ +LIN L + G
Sbjct: 449 DKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVF 508
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
A +F+ M GE DV +TS+I G+C +EA
Sbjct: 509 EAQRIFD-MIIRTGE----------------------KADVNIFTSLIDGYCLIGKMSEA 545
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
+ M+ G++P++VT+ +++ CKNG++D+ L ++ GV+P F Y ++DG
Sbjct: 546 FRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDG 605
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
GR AKE+F M G T+ +YSIL+ G C+N E A++++ ++ + +K D
Sbjct: 606 LFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFD 665
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
+VI N + +F+ + E A LF + G+ TY ++ L K + EA +F
Sbjct: 666 IVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFS 725
Query: 380 TL 381
+
Sbjct: 726 VM 727
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 99/234 (42%), Gaps = 24/234 (10%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F + D M+++ P V ++ GC KN D L LF+ L G+ P +TY I+++
Sbjct: 546 FRVHDAMVSVGIEPDIVTYGTLVNGC-CKNGRIDDGLILFRELLHKGVKPTTFTYGIILD 604
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
GR + + ++ S T++ L+ GLC + EA +F KL +
Sbjct: 605 GLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKF 664
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
++ N +I+ +++ ++A+ LF + D + P V
Sbjct: 665 DIVILNIMISKMFKARRR-----------------------EEAEGLFASIPDYGLVPTV 701
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
TYT ++ EA+ + M+ G+ P NVI+ L + G++ +A
Sbjct: 702 QTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKA 755
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 65/156 (41%), Gaps = 3/156 (1%)
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS- 306
P + Y+ L+D C R++ A F + G V S L+ G C K + A+
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM--QRDGVAADTWTYRTFIDG 364
L+ M G PD + Y+T+ + + + + A + Q G + Y T + G
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
L K + EA +LF + ++ YN +I L
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHAL 256
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 124/406 (30%), Positives = 203/406 (50%), Gaps = 15/406 (3%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P V +N+L G L K K LF ++ L P+ T+N LI+ +CK G
Sbjct: 92 MKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGE 151
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V + R+ + P+ +TF SL+ GLC RI EA + +++ G P+ FTY+
Sbjct: 152 VDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSI 211
Query: 128 LINGLYRTGHTI-VALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKD 173
+ +GL ++ AL+L+ E A G G EG V+KA+E+ + +
Sbjct: 212 IFDGLLKSDDGAGAALDLYRE-AIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVE 270
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
+ P V Y +++ G+C D + A + +M +G++PN + FN ++D+ C+ +D+
Sbjct: 271 HGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDK 330
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A + M+ G+ P+ YN L+DG+ +R ++ ME G V SY LIN
Sbjct: 331 AEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLIN 390
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
CK+ +I A + +M+ +G+ P+ IYN L + ++ A + FDEM ++G+ A
Sbjct: 391 CLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGA 450
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
TY + I GLCK + EA E+F + D+ YN LI G
Sbjct: 451 TIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISG 496
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 195/433 (45%), Gaps = 60/433 (13%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
++D+M P ++ L ++K +D VL LFK + G PD Y +
Sbjct: 18 LYDFM-RQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAA 76
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K+G + + + R PN + LI GLC E RI +A LF ++ V PN
Sbjct: 77 VKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNR 136
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
T+NTLI+G + G VA+ L E +MK E + P ++T
Sbjct: 137 VTFNTLIDGYCKAGEVDVAIGLRE-----------------------RMKKEKVEPSIIT 173
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD------------------- 223
+ S++ G C A EA+C+L E+ G P+ T+++I D
Sbjct: 174 FNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREA 233
Query: 224 -----------------ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
LCK GK+++A +L +++ G+ P +YNT+++G+C G +
Sbjct: 234 IGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDM 293
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+RA MES G +++ +I+ +C+ + I+ A +M+ KGI P V YN L
Sbjct: 294 DRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNIL 353
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
+ R F++ +EM+ +G + +Y + I+ LCK+ I+EA + R +
Sbjct: 354 IDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGV 413
Query: 387 ELDIRAYNCLIDG 399
+ YN LIDG
Sbjct: 414 LPNANIYNMLIDG 426
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 177/392 (45%), Gaps = 15/392 (3%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
+IL L K + + K L GL P YN ++N +C++G + + + ++
Sbjct: 246 SILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMES 305
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
PN + F S+I C I +A K+ G P+V TYN LI+G R
Sbjct: 306 RGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSR 365
Query: 141 ALNLFEEMASGNGE------FGV-------EGFVDKAKELFLQMKDENINPDVVTYTSVI 187
+ EEM NGE +G +G + +A+ + M + P+ Y +I
Sbjct: 366 CFQILEEMEE-NGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLI 424
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
G C EA EM G+ +VT+N ++ LCK GK+ EA + L+ G
Sbjct: 425 DGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHC 484
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P+ YN+L+ G+ G + EL+ +M+ +G T+ ++ LI+G C + I+ +L
Sbjct: 485 PDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISG-CSKEGIKLKETL 543
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
+ EML + PD V+YN + E V++AF L EM GV D TY + I G K
Sbjct: 544 FNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLK 603
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ E +L ++ + Y+ LI G
Sbjct: 604 EGKLSETKDLVDDMKAKGLIPEADTYSLLIQG 635
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 192/438 (43%), Gaps = 49/438 (11%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+++R P +FN L K D + L +R+ + P + T+N L++ CK R
Sbjct: 127 MSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARR 186
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTS----------------------------------- 92
+ +L I + F P+ T++
Sbjct: 187 IEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCS 246
Query: 93 -LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG 151
L+ GLC E ++ +A + L G P YNT++NG + G A+ E+M S
Sbjct: 247 ILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESR 306
Query: 152 N------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
+F +DKA+E +M + I P V TY +I G+ ++
Sbjct: 307 GLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRC 366
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
+L EM + G +PNV+++ +++ LCK+GK+ EA +L M+ GV PNA +YN L+DG
Sbjct: 367 FQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDG 426
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
C G++ A F M G T+ +Y+ LI G CK +++ A ++ + S G PD
Sbjct: 427 SCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPD 486
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
V+ YN+L ++ +L++ M++ G+ T+ I G C I LF
Sbjct: 487 VITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISG-CSKEGIKLKETLFN 545
Query: 380 TLRILKCELDIRAYNCLI 397
+ + D YN +I
Sbjct: 546 EMLQMNLSPDRVVYNAMI 563
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 177/392 (45%), Gaps = 50/392 (12%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P +FN + + + D K++ G+ P + TYNILI+ + ++
Sbjct: 303 MESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCV 362
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
S F +L + + PN +++ SLI LC + +I+EA + + G PN YN
Sbjct: 363 FSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNM 422
Query: 128 LINGLYRTGHTIVALNLFEEMA-SGNGEFGVE-----------GFVDKAKELFLQMKDEN 175
LI+G G AL F+EM+ +G G V G + +A+E+F +
Sbjct: 423 LIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTG 482
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLI------------------------------- 204
PDV+TY S+I G Y+N N KCL +
Sbjct: 483 HCPDVITYNSLISG--YSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLK 540
Query: 205 -----EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
EM+ + P+ V +N ++ + G + +A L M+ +GVRP+ YN+L+ G
Sbjct: 541 ETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILG 600
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
G+++ K+L M++ G +YS+LI G+C K+ GA Y EML G P+
Sbjct: 601 HLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPN 660
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
V I N L L + +++ A + EM +G+
Sbjct: 661 VCICNELSTGLRKDGRLQEAQSICSEMIANGM 692
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 152/352 (43%), Gaps = 49/352 (13%)
Query: 97 LCAESRIM-EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS----- 150
+C+ES++ + + L+ +R G P+ ++ L + L+LF+EM
Sbjct: 5 VCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRP 64
Query: 151 -----GNGEFGVE--GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
G G + A ELF MK + P+V Y +I G C +A+ L
Sbjct: 65 DKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLF 124
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
EM + + PN VTFN ++D CK G++D A L + M + V P+ +N+L+ G C
Sbjct: 125 GEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKA 184
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG-ALSLYGEMLSKGIK----- 317
R+ A+ + ++ G F+YSI+ +G K+ + G AL LY E + KG+K
Sbjct: 185 RRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYT 244
Query: 318 ------------------------------PDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
P VIYNT+ +I ++RA ++M+
Sbjct: 245 CSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQME 304
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G+ + + + ID C+ I +A E + + + YN LIDG
Sbjct: 305 SRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDG 356
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 115/239 (48%), Gaps = 1/239 (0%)
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
+ EL+ M+ E P ++ + ++ L EM+ G +P+ + + M
Sbjct: 14 QVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAM 73
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
K G + A L + M + V PN FVYN L+ G C R+ A++LF M
Sbjct: 74 LAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLV 133
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
+++ LI+GYCK E++ A+ L M + ++P ++ +N+L L + ++E A +
Sbjct: 134 PNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCM 193
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCK-NSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+E++ +G D +TY DGL K + A++L+R ++D + L++GL
Sbjct: 194 LNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGL 252
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F + M++M P +++ G L + K +T L + + GL P+ TY++LI
Sbjct: 576 FSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETK-DLVDDMKAKGLIPEADTYSLLIQ 634
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 117
C + + +V +L + F PN L GL + R+ EA ++ +++ G
Sbjct: 635 GHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANG 691
>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Cucumis sativus]
Length = 481
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 141/443 (31%), Positives = 205/443 (46%), Gaps = 103/443 (23%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F FD M+ P PP + SFN L G LAK HY + SL+ ++ GL PDL+T NIL N
Sbjct: 75 FHFFDLMMRSHPIPP-ISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNILAN 133
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C LC +R+ E A T + G P
Sbjct: 134 C-----------------------------------LCNLNRVSEGLAAMTGILRRGYIP 158
Query: 121 NVFTYNTLINGLY---RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENIN 177
++ TYNTLI GLY + GH D+AKE+F +MK + +
Sbjct: 159 DIVTYNTLIKGLYGLCKVGHE-----------------------DEAKEIFEEMKAQGMI 195
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM------ 231
P+V++Y+S++ GFC A E+K L EM+DQGVQPN+V FNV++D LCK GK+
Sbjct: 196 PNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSA 255
Query: 232 --------------------------------DEASRLLDLMIQIGVRPNAFVYNTLMDG 259
+EA L + M Q+G RPN Y+TL+ G
Sbjct: 256 RKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTG 315
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
TG+V A +LF M++ G + Y I ++G CKN + A+ L+ E+ S K D
Sbjct: 316 LLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLD 375
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
Y+ L L + +VE A++ F ++ ++G+ + T I G C+ + +A LF
Sbjct: 376 FESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFE 435
Query: 380 TLRILK---CELDIRAYNCLIDG 399
+ ++ C DI YN L+ G
Sbjct: 436 KMEKMEENGCTPDIITYNTLLRG 458
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 122/346 (35%), Positives = 186/346 (53%), Gaps = 31/346 (8%)
Query: 63 CKMGRVS--HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK G + F ++RS P +F L+ GL + + +L+ K+R+ G P
Sbjct: 64 CKTGNIDVIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSP 123
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
++FT N L N L LN E + G++ PD+
Sbjct: 124 DLFTLNILANCL-------CNLNRVSEGLAAMTGILRRGYI----------------PDI 160
Query: 181 VTYTSVIRGF---CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
VTY ++I+G C +EAK + EM QG+ PNV++++ ++ C GK++E+ RL
Sbjct: 161 VTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRL 220
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRV---NRAKELFVSMESMGCTHTVFSYSILING 294
+ M+ GV+PN +N L+D C G++ + A++LF+SM S GC H SY+ILING
Sbjct: 221 FNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILING 280
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
YCK ++E A++LY EM G +P+V Y+TL L + +V A KLF M+ G++ D
Sbjct: 281 YCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVD 340
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ Y F+DGLCKN + EA+ELF L+ +LD +Y+ LIDGL
Sbjct: 341 SCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGL 386
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 152/321 (47%), Gaps = 21/321 (6%)
Query: 15 PPVCSFNILFGCL---AKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P + ++N L L K H D +F+ + + G+ P++ +Y+ L++ FC G++
Sbjct: 158 PDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEES 217
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME---AAALFTKLRVFGCEPNVFTYNTL 128
+ ++ PN V F LI LC E +I + A LF + GCE N +Y L
Sbjct: 218 KRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTIL 277
Query: 129 INGLYRTGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKDENI 176
ING + A+NL+ EM V+ G V A +LF MK I
Sbjct: 278 INGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGI 337
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
+ D Y + G C EA L E+ + + +++ ++D LCK GK++ A
Sbjct: 338 SVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWE 397
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM---GCTHTVFSYSILIN 293
+ Q G++PN N ++ GFC +V++A LF ME M GCT + +Y+ L+
Sbjct: 398 FFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLR 457
Query: 294 GYCKNKEIEGALSLYGEMLSK 314
G+C++ ++E ++L +M +
Sbjct: 458 GFCESNKLEEVVNLLHKMFKR 478
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 200/388 (51%), Gaps = 26/388 (6%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
S P + ++N L + + +++ + G+ PD+ T NIL++ CK G V
Sbjct: 165 SAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEAL 224
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+L + + P+ +T+ S+I LC +++EAA + L+ C P++ T+NTL++G
Sbjct: 225 EILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEI---LKTMSCSPDLVTFNTLLDGF 281
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ G AL + EEM ENI PDV+TYT ++ G C
Sbjct: 282 CKAGMLPRALEVLEEMCR-----------------------ENILPDVITYTILVNGLCR 318
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
A LL E++ QG P+V+ + ++D LCK+G+++EA +L+ M G R +
Sbjct: 319 VGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVM 378
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
Y++L+ G+C G V++A+E+ M S+ +F+Y+I++ G K+ I A+SL +++
Sbjct: 379 YSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLV 438
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
++G PDVV YNTL L + ++V A L DEM G + T + + GLC+ +
Sbjct: 439 ARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVD 498
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
+A L + + ++ Y LIDGL
Sbjct: 499 DAWSLVVEMSRKRHAPNVVVYTSLIDGL 526
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 192/367 (52%), Gaps = 17/367 (4%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G D+++YN L++ K G V +L S +PN VTF LI+G C + M A
Sbjct: 22 GYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRA 81
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV--------- 157
L F P+V+ +N LI+GL++ G+ A+ LFE M S + +
Sbjct: 82 LEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISG 141
Query: 158 ---EGFVDKAKELFLQM--KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
G ++KA+EL +M K PD+VTY ++I F A+ EA +M G+
Sbjct: 142 LCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGIN 201
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
P+V+T N+++ +CK+G ++EA +LD M G P+ YN+++ C+ G+V A E+
Sbjct: 202 PDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEI 261
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
+++M C+ + +++ L++G+CK + AL + EM + I PDV+ Y L L
Sbjct: 262 ---LKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCR 318
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
+ QV+ AF L +E+ R G D Y + +DGLCK+ I EA +L + + + C +
Sbjct: 319 VGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVM 378
Query: 393 YNCLIDG 399
Y+ L+ G
Sbjct: 379 YSSLVSG 385
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 187/389 (48%), Gaps = 15/389 (3%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
C F + P V + NIL + K+ + L + + G PD+ TYN +I+
Sbjct: 189 CAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHA 248
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
C G+V +L + SC +P+ VTF +L+ G C + A + ++ P+
Sbjct: 249 LCVAGKVVEAAEILKTM--SC-SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPD 305
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFL 169
V TY L+NGL R G VA L EE+ V G +++A +L
Sbjct: 306 VITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVK 365
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M VV Y+S++ G+C A + ++A+ +L EM+ + P + T+N+++ L K+G
Sbjct: 366 EMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDG 425
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+ +A L+ ++ G P+ YNTL+DG C RV A +L M S GC +
Sbjct: 426 SISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLG 485
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
++ G C+ ++ A SL EM K P+VV+Y +L L + +++ A + D M+
Sbjct: 486 SVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQ 545
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELF 378
GVA D + YR I + + EA+ ++
Sbjct: 546 GVALDDFAYRKLIVSMSHGGRVAEAMAMY 574
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 167/355 (47%), Gaps = 23/355 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +FN L K L + + + + PD+ TY IL+N C++G+V F +
Sbjct: 269 PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYL 328
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L I+R + P+ + +TSL+ GLC I EA L ++ V GC V Y++L++G R
Sbjct: 329 LEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCR 388
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G+ V KA+E+ +M N+ P + TY V+ G
Sbjct: 389 AGN-----------------------VHKAREILAEMVSINMVPPLFTYNIVLGGLIKDG 425
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
++A L+ +++ +G P+VVT+N ++D LCK ++ EA L D M G PN
Sbjct: 426 SISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLG 485
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+++ G C GRV+ A L V M V Y+ LI+G CK+ ++ A + M +
Sbjct: 486 SVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQ 545
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
G+ D Y L V + +V A ++DEM G D T +T + NS
Sbjct: 546 GVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNS 600
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 184/400 (46%), Gaps = 17/400 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +F IL K L + L+ + PD+Y +N+LI+ K G +
Sbjct: 60 PNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKL 119
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE--PNVFTYNTLINGL 132
+ S P VT+ ++I GLC + +A L ++ G + P++ TYNTLIN
Sbjct: 120 FENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAF 179
Query: 133 YRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDV 180
YR A E+M + V +G V++A E+ MK PDV
Sbjct: 180 YRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDV 239
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+TY S+I C A EA +L M P++VTFN ++D CK G + A +L+
Sbjct: 240 ITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEE 296
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M + + P+ Y L++G C G+V A L + G V +Y+ L++G CK+ E
Sbjct: 297 MCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGE 356
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
IE A L EM +G + VV+Y++L V +A ++ EM + +TY
Sbjct: 357 IEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNI 416
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ GL K+ I +AV L L D+ YN LIDGL
Sbjct: 417 VLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGL 456
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 105/198 (53%), Gaps = 2/198 (1%)
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
+++ G PN+VTF +++ CK G+ A L + + V P+ +++N L+ G G
Sbjct: 52 DLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDG 111
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK--PDVVI 322
++A +LF +MES + +Y+ +I+G CK+ +E A L EM+ KG K PD+V
Sbjct: 112 NPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVT 171
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
YNTL + ++ A ++M+ G+ D T + G+CK+ + EA+E+ ++
Sbjct: 172 YNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMK 231
Query: 383 ILKCELDIRAYNCLIDGL 400
+ D+ YN +I L
Sbjct: 232 LAGPVPDVITYNSIIHAL 249
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 2/194 (1%)
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
G + +V ++N ++D L K+G ++ ++ G PN + L+ G C G+ R
Sbjct: 21 DGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMR 80
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
A E +++ V+ +++LI+G K+ + A+ L+ M S +KP++V YNT+
Sbjct: 81 ALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVIS 140
Query: 329 VLFEIHQVERAFKLFDEMQRDG--VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
L + +E+A +L +EM R G A D TY T I+ + S I EA ++
Sbjct: 141 GLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGI 200
Query: 387 ELDIRAYNCLIDGL 400
D+ N L+ G+
Sbjct: 201 NPDVLTCNILVSGI 214
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 2/159 (1%)
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q G + + YN L+D +G R +++ + GC+ + ++ ILI G CK +
Sbjct: 20 QDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAM 79
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL + + PDV I+N L LF+ ++A KLF+ M+ V + TY T I
Sbjct: 80 RALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVI 139
Query: 363 DGLCKNSYIVEAVELFRTL--RILKCELDIRAYNCLIDG 399
GLCK+ + +A EL + + K DI YN LI+
Sbjct: 140 SGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINA 178
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%)
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
E G H V SY+ L++ K+ +Y ++L G P++V + L + Q
Sbjct: 19 EQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
RA + + VA D + + I GL K+ +AV+LF + + + +I YN +
Sbjct: 79 MRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTV 138
Query: 397 IDGL 400
I GL
Sbjct: 139 ISGL 142
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 135/469 (28%), Positives = 218/469 (46%), Gaps = 83/469 (17%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P VCS+N L +K D LF ++ + PD+ TYN LI+ CK + V
Sbjct: 155 PDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERV 214
Query: 75 LGRILRSCFTPNAVTFTSLIKG-----------------------------------LCA 99
L +++ + PN T+ SLI G LC
Sbjct: 215 LEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCR 274
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG-----HTIVALNLFEEMASGNGE 154
+RI EA +F + + G +PN+ +Y+TL++G G +++V L + + + +
Sbjct: 275 HNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRF 334
Query: 155 FGVE-------GFVDKAKELFLQMKDENINPDVVTYTSVI-------------------- 187
F + G +DKA +F M+++ + PD VT+ +VI
Sbjct: 335 FNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMV 394
Query: 188 ---------------RGFCYANDWNEAKCLLIEMMDQGVQP-NVVTFNVIMDELCKNGKM 231
+G C + +AK L+ EMM++ + P V F+ I++ L K G++
Sbjct: 395 DIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRV 454
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
E ++DLM+Q G RPN +N+LM+G+CL G + A L +M S+G + Y L
Sbjct: 455 AEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTL 514
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
++GYCKN I+ AL+++ +ML KG+KP V+YN + LF+ + A K+F EM G
Sbjct: 515 VDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGT 574
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY + GLC+N+ EA L L + + DI +N +I +
Sbjct: 575 TVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 623
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 170/352 (48%), Gaps = 29/352 (8%)
Query: 36 VLSLFKRLN------STGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVT 89
+ LFKR++ + P +YTYNILI+C+ +M R V GR+LR+ P+ +
Sbjct: 100 AVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCS 159
Query: 90 FTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
+ +LI G E + +A LF K+ P+V TYN+LI+GL +T +
Sbjct: 160 YNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMV---------- 209
Query: 150 SGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
K++ + QM D I P+ TY S+I G+ A W E+ + EM
Sbjct: 210 -------------KSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSS 256
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
G+ P VV N + LC++ ++ EA + D M+ G +PN Y+TL+ G+ G
Sbjct: 257 GLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANM 316
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
L M S G ++ILIN Y + ++ A+ ++ +M +KG+ PD V + T+
Sbjct: 317 NSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISS 376
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
L I +++ A F+ M GV YR I G C + +V+A EL +
Sbjct: 377 LCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEM 428
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 189/408 (46%), Gaps = 14/408 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IFD M+ P P + S++ L A + + SL + S G+ P+ +NILIN +
Sbjct: 284 IFDSMVLKGPKPN-IISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAY 342
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
+ G + ++ + P+ VTF ++I LC R+ +A F + G P+
Sbjct: 343 ARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSE 402
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN-GEFGV------------EGFVDKAKELFL 169
Y LI G G + A L EM + + GV EG V + K++
Sbjct: 403 AVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMD 462
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
M P+VVT+ S++ G+C + EA LL M G++PN + ++D CKNG
Sbjct: 463 LMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNG 522
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
++D+A + M+ GV+P + +YN ++ G R AK++F M G T ++ +Y
Sbjct: 523 RIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYG 582
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
+++ G C+N + A L ++ + +K D++ +N + + ++ + + A +LF +
Sbjct: 583 VVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTY 642
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
G+ TY I L K EA LF ++ D R N ++
Sbjct: 643 GLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIV 690
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 157/336 (46%), Gaps = 23/336 (6%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F++M+++ P ++ GC + + + +N P + ++ +IN
Sbjct: 390 FNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLF 449
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K GRV+ G ++ ++++ PN VTF SL++G C + EA AL + G EPN +
Sbjct: 450 KEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCY 509
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
Y TL++G + G +D A +F M + + P V Y
Sbjct: 510 IYGTLVDGYCKNGR-----------------------IDDALTVFRDMLHKGVKPTSVLY 546
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
++ G A AK + EM++ G ++ T+ V++ LC+N DEA+ LL+ +
Sbjct: 547 NIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFA 606
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
+ V+ + +N ++ GR AKELF ++ + G TV +Y+++I+ K + E
Sbjct: 607 MNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEE 666
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
A +L+ + G PD + N + +L + +V +A
Sbjct: 667 ADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKA 702
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 127/303 (41%), Gaps = 12/303 (3%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+N PP V F+ + L K + + TG P++ T+N L+ +C +G
Sbjct: 428 MMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVG 487
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ F +L + PN + +L+ G C RI +A +F + G +P YN
Sbjct: 488 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYN 547
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDE 174
+++GL++ T A +F EM ++ + D+A L ++
Sbjct: 548 IILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAM 607
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
N+ D++T+ VI EAK L + G+ P V T+N+++ L K +EA
Sbjct: 608 NVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEA 667
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
L + + G P++ + N ++ V +A ++ T + S+L +
Sbjct: 668 DNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASL 727
Query: 295 YCK 297
+ +
Sbjct: 728 FSR 730
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 112/265 (42%), Gaps = 16/265 (6%)
Query: 15 PPVCSFNILFG--CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
P V +FN L CL N + +L + S G+ P+ Y Y L++ +CK GR+
Sbjct: 471 PNVVTFNSLMEGYCLVGN--MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDAL 528
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
V +L P +V + ++ GL R A +F ++ G ++ TY ++ GL
Sbjct: 529 TVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGL 588
Query: 133 YRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDV 180
R T A L E++ + N +F + G +AKELF + + P V
Sbjct: 589 CRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTV 648
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
TY +I + EA L I + G P+ N I+ L K ++ +AS L +
Sbjct: 649 HTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSI 708
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGR 265
+ + + A + L F G+
Sbjct: 709 IDENNLTLEASTISLLASLFSREGK 733
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%)
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
P + YN L +H+ E A +F + R G+ D +Y T IDG K + +A EL
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179
Query: 378 FRTLRILKCELDIRAYNCLIDGL 400
F + D+ YN LIDGL
Sbjct: 180 FYKMIEQSVSPDVVTYNSLIDGL 202
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 187/387 (48%), Gaps = 17/387 (4%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V ++N + + + D +++ + G PD+ TY LI FCK V
Sbjct: 138 RGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGR 197
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
G +LG + R FTP+ VT++++I GLC R+ +A +F ++ C P TYN+LI
Sbjct: 198 GLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIG 254
Query: 131 GLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINP 178
G R G A+ L +M F G +D A ELF QM ++P
Sbjct: 255 GYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSP 314
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
DVVT+TS++ G C +A LL E+ +G P + T+N ++D CK ++ +A L+
Sbjct: 315 DVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELV 374
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG--CTHTVFSYSILINGYC 296
G PN YN L+ G C GR ++A + + S G C +V Y+I+++ C
Sbjct: 375 ADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALC 434
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
++ + A+ Y EM+ +G P + T+ L + HQ ++A +L +EM + G
Sbjct: 435 RDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPG 494
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRI 383
T + C+ I +A EL LR+
Sbjct: 495 TCDAVVSAYCRAGMIQKADELASELRL 521
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 187/386 (48%), Gaps = 26/386 (6%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP ++ L L+K + + + + + S PD T +++ C RV
Sbjct: 36 PPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARE 95
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
++ +L NA+T+++L+ GLC R+ EA AL + GC P V TYN++I G
Sbjct: 96 LVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFC 155
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
R VD+A QM E +PD++TYT++I GFC +
Sbjct: 156 RARR-----------------------VDEAHGFMEQMVAEGCHPDIITYTALIGGFCKS 192
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
D LL E+ +G P++VT++ ++D LCK G++ +A +D+ ++ P A Y
Sbjct: 193 RDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDA---VDIFEEMSCAPTAITY 249
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N+L+ G+C G ++ A L M C V +Y+ L++ +CK ++ A L+ +M++
Sbjct: 250 NSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVA 309
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+ PDVV + +L L ++E A +L +E+ R G +TY +DG CK + + +
Sbjct: 310 NKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRK 369
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
A EL R + YN L+ G
Sbjct: 370 AEELVADFRSRGFVPNTVTYNILVAG 395
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 188/385 (48%), Gaps = 27/385 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P N++ G L + L +++++N PD TY L++ K R+ V
Sbjct: 3 PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHP-PDFLTYTKLVHGLSKARRLRDAVQV 61
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ + P+ T T +++ LC R+ +A L ++ G N TY+ L++GL +
Sbjct: 62 LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
A+ L E MA + P VVTY S+I GFC A
Sbjct: 122 CERLDEAVALVETMA-----------------------ERGCAPTVVTYNSIITGFCRAR 158
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+EA + +M+ +G P+++T+ ++ CK+ + LL + + G P+ Y+
Sbjct: 159 RVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYS 218
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
T++DG C GR+ A ++F E M C T +Y+ LI GYC+ +++ A+ L G+M+
Sbjct: 219 TVIDGLCKAGRLRDAVDIF---EEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDD 275
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
PDVV Y TL ++ +++ A++LF +M + ++ D T+ + +DGLC + +A
Sbjct: 276 KCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDA 335
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+EL + C I YNC++DG
Sbjct: 336 LELLEEITRRGCPPTIYTYNCVVDG 360
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 183/367 (49%), Gaps = 32/367 (8%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV--SHGFVVLG 76
+++ L L K + D ++L + + G P + TYN +I FC+ RV +HGF +
Sbjct: 111 TYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGF--ME 168
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+++ P+ +T+T+LI G C + L ++ G P++ TY+T+I+GL + G
Sbjct: 169 QMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAG 228
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
A+++FEEM+ P +TY S+I G+C A D
Sbjct: 229 RLRDAVDIFEEMSCA--------------------------PTAITYNSLIGGYCRAGDM 262
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+EA LL +M+D P+VVT+ +M CK G++D+A L M+ + P+ + +L
Sbjct: 263 DEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSL 322
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG C GR+ A EL + GC T+++Y+ +++GYCK ++ A L + S+G
Sbjct: 323 VDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGF 382
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT--YRTFIDGLCKNSYIVEA 374
P+ V YN L + ++A + D++ +G T Y +D LC++ +A
Sbjct: 383 VPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDA 442
Query: 375 VELFRTL 381
V+ + +
Sbjct: 443 VQFYEEM 449
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 159/351 (45%), Gaps = 27/351 (7%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
P +N++I C+ GR+ H V R + P+ +T+T L+ GL R+ +A +
Sbjct: 3 PGTLLHNVVIGGLCRAGRLRHALGVY-RQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQV 61
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL 169
++ P+ T ++ L + VD A+EL
Sbjct: 62 LQEMVSARHVPDNTTLTVVVQSLC-----------------------LGDRVDDARELVE 98
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M + + +TY++++ G C +EA L+ M ++G P VVT+N I+ C+
Sbjct: 99 EMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRAR 158
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
++DEA ++ M+ G P+ Y L+ GFC + V R EL + G T + +YS
Sbjct: 159 RVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYS 218
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
+I+G CK + A+ ++ EM P + YN+L ++ A +L +M D
Sbjct: 219 TVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDD 275
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
A D TY T + CK + +A ELF+ + K D+ + L+DGL
Sbjct: 276 KCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGL 326
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 69/179 (38%), Gaps = 14/179 (7%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R PP + ++N + K L S G P+ TYNIL+ C+ GR
Sbjct: 342 ITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGR 401
Query: 68 VSHGFVVLGRI-LRSCFTPNAVTFTSLI-KGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
L ++ P +V ++I LC + R +A + ++ G P T+
Sbjct: 402 TDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATF 461
Query: 126 NTLINGLYRTGHTIVALNLFEEM-----ASGNG-------EFGVEGFVDKAKELFLQMK 172
T++ L + A L EEM G G + G + KA EL +++
Sbjct: 462 ATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 520
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 21/105 (20%), Positives = 45/105 (42%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P P V + I+ L ++ D + ++ + G P T+ ++ CK +
Sbjct: 418 PCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQA 477
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF 116
+L +++ TP T +++ C I +A L ++LR++
Sbjct: 478 HELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRLY 522
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 187/372 (50%), Gaps = 12/372 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L K + +R+ + G PD +TYN +I+ +CK+ V +
Sbjct: 254 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 313
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + F P+ VT+ SLI GLCAE + A LF + + G +P++ YN+L+ GL
Sbjct: 314 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 373
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF---------VDKAKELFLQMKDENIN---PDVVT 182
G + AL + EMA ++ + + + + M D + PDV T
Sbjct: 374 QGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 433
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ ++I G+C + A L+ M + G+ P+ +T+N +++ LCK GK++E + MI
Sbjct: 434 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 493
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G PN YN L++ FC + ++ A ++ V M G S++ LI G+C+N ++E
Sbjct: 494 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 553
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
GA L+ ++ KG +NTL + A K+FDEM G AD++TYR I
Sbjct: 554 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLI 613
Query: 363 DGLCKNSYIVEA 374
DG CK + + A
Sbjct: 614 DGSCKTANVDRA 625
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/451 (27%), Positives = 195/451 (43%), Gaps = 90/451 (19%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC---------- 63
PP ++N + L ++D ++ R+ + G+ PDL+T+ I + FC
Sbjct: 83 PPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALR 142
Query: 64 ------KMGRVSHGFVVLG---------------RILRSCFTPNAVTFTSLIKGLCAESR 102
G V++ VV G ++L + PN F ++ LC
Sbjct: 143 LLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGD 202
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVD 162
++EA L K+ G N+FTYN I GL G A+ L + M + + V
Sbjct: 203 VLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRA----YAV----- 253
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
PDVVTY ++IRG C + EA L MM+QG P+ T+N I+
Sbjct: 254 ---------------PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTII 298
Query: 223 DELCKNGKMDEASRLLDLMI-------QI----------------------------GVR 247
D CK + EA+ LL + Q+ G++
Sbjct: 299 DGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIK 358
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P+ VYN+L+ G CL G + A ++ M GC + +Y+I+ING CK I A +
Sbjct: 359 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 418
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
+ + KG PDV +NTL + +++ A +L + M G+A DT TY + ++GLCK
Sbjct: 419 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 478
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLID 398
+ E E F+ + + C + YN LI+
Sbjct: 479 AGKVNEVNETFQEMILKGCHPNPITYNILIE 509
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 165/361 (45%), Gaps = 28/361 (7%)
Query: 40 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
F+R++ P YN +++ V R+L + +P+ T T ++ C
Sbjct: 74 FERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCL 133
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEG 159
+R A L L G Y T++ GLY GHT
Sbjct: 134 TARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHT--------------------- 168
Query: 160 FVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 219
A++LF QM ++ P++ + V+ C D EA LL +++ +G+ N+ T+N
Sbjct: 169 --HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYN 226
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
+ + LC+ G++ EA RL+D M V P+ YNTL+ G C A M +
Sbjct: 227 IWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQ 285
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
GC F+Y+ +I+GYCK ++ A L + + KG PD V Y +L L VERA
Sbjct: 286 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 345
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+LF+E Q G+ D Y + + GLC I+ A+++ + C DI+ YN +I+G
Sbjct: 346 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 405
Query: 400 L 400
L
Sbjct: 406 L 406
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 84/206 (40%), Gaps = 32/206 (15%)
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
+ G++ +A + M P A YN +MD ++A +++V M + G + +
Sbjct: 62 ARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDL 121
Query: 286 FSYSILINGYC-------------------------------KNKEIEGALSLYGEMLSK 314
+++I + +C + A L+ +ML
Sbjct: 122 HTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHT 181
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
+ P++ +N + L + V A L ++ + G++ + +TY +I GLC+ + EA
Sbjct: 182 HVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEA 241
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
V L +R D+ YN LI GL
Sbjct: 242 VRLVDGMRAYAVP-DVVTYNTLIRGL 266
>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
Length = 595
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 127/404 (31%), Positives = 192/404 (47%), Gaps = 18/404 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG--LFPDLYTYNILINCFCKMGRVSHGF 72
P V ++ IL L K+ H L + R++S G + PD+ N +++ CK+GR+
Sbjct: 164 PDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAI 223
Query: 73 VVLGRILRSCF--TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ + +R PNAVT+ L C I A + ++ G PNV T NT+I
Sbjct: 224 IFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIG 283
Query: 131 GLYRTGHTIVALNLFEEM------ASGNG---EFGVEGF-----VDKAKELFLQMKDENI 176
GL R G AL F E A GN F VD A ELF +M D
Sbjct: 284 GLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGH 343
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
PD V Y ++I G A +A M G + + +N+++ C+ K+ EA
Sbjct: 344 RPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYE 403
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
LL+ M +G++P+ + YNTL+ G C G + EL M GC +V ++ L++GYC
Sbjct: 404 LLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYC 463
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K + + AL ++ M I+P+ VIYNTL L + +V+ A KLFDEM+ V A+
Sbjct: 464 KAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVT 523
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY + GL +A EL +R +C + + L++ L
Sbjct: 524 TYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWL 567
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 157/352 (44%), Gaps = 51/352 (14%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G P+ TYN L + FC++G + ++ R+ + PN +T ++I GLC R+ A
Sbjct: 235 GCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAA 294
Query: 107 AALFTKLRVFGCEP--NVFTYNTLINGLYRTGHTIVALNLFEEMA--------------- 149
F + R E N TY+TL + + +A+ LF EMA
Sbjct: 295 LEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMI 354
Query: 150 SGNGEFG---------------------------VEGFVDKAK-----ELFLQMKDENIN 177
SG + G + GF K K EL +MK +
Sbjct: 355 SGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQ 414
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
PDV TY +++ G C A D++ LL M+D G QP+VVTF ++ CK GK DEA R+
Sbjct: 415 PDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRI 474
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
M + ++PN +YNTL+D C + V+ A +LF M V +Y+ L+ G
Sbjct: 475 FRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQD 534
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
K E A L M + P+ V + L L EI + ER K F + QRD
Sbjct: 535 KKMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGETER-LKCFMQ-QRD 584
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 144/324 (44%), Gaps = 31/324 (9%)
Query: 84 TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALN 143
P+ F SL+ L + LFT +R +P+V TY L+NGL ++GH AL
Sbjct: 128 APDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALK 187
Query: 144 LFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
+ + M+S ++ PD+ +V+ G C +A +
Sbjct: 188 VLDRMSS---------------------PGSDVCPDIAILNTVVDGLCKIGRLQQAIIFV 226
Query: 204 IEMMD--QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
E M G PN VT+N + D C+ G + A +++ M + GV PN NT++ G C
Sbjct: 227 DERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLC 286
Query: 262 LTGRVNRAKELF-----VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
GRV A E F V E+ G +YS L + + ++ A+ L+ EM G
Sbjct: 287 RVGRVGAALEFFREKRTVWPEARG---NAVTYSTLASAFLHCNNVDMAMELFHEMADHGH 343
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+PD V+Y T+ L + ++ A M++ G D Y I G C+ + EA E
Sbjct: 344 RPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYE 403
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
L ++ + + D+ YN L+ GL
Sbjct: 404 LLEEMKGVGLQPDVYTYNTLLSGL 427
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 80/195 (41%), Gaps = 39/195 (20%)
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
+ A L D + P+ ++N+L+ G + ELF SM V +Y IL
Sbjct: 113 EAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGIL 172
Query: 292 INGYCKNKEIEGALSLYGEMLSKG--IKPDVVIYNTLFVVLFEIHQVERAFKLFDE---- 345
+NG CK+ + AL + M S G + PD+ I NT+ L +I ++++A DE
Sbjct: 173 LNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRH 232
Query: 346 ---------------------------------MQRDGVAADTWTYRTFIDGLCKNSYIV 372
M+++GVA + T T I GLC+ +
Sbjct: 233 VHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVG 292
Query: 373 EAVELFRTLRILKCE 387
A+E FR R + E
Sbjct: 293 AALEFFREKRTVWPE 307
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 187/372 (50%), Gaps = 12/372 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L K + +R+ + G PD +TYN +I+ +CK+ V +
Sbjct: 253 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 312
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + F P+ VT+ SLI GLCAE + A LF + + G +P++ YN+L+ GL
Sbjct: 313 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 372
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF---------VDKAKELFLQMKDENIN---PDVVT 182
G + AL + EMA ++ + + + + M D + PDV T
Sbjct: 373 QGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 432
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ ++I G+C + A L+ M + G+ P+ +T+N +++ LCK GK++E + MI
Sbjct: 433 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 492
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G PN YN L++ FC + ++ A ++ V M G S++ LI G+C+N ++E
Sbjct: 493 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 552
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
GA L+ ++ KG +NTL + A K+FDEM G AD++TYR I
Sbjct: 553 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLI 612
Query: 363 DGLCKNSYIVEA 374
DG CK + + A
Sbjct: 613 DGSCKTANVDRA 624
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/451 (27%), Positives = 195/451 (43%), Gaps = 90/451 (19%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC---------- 63
PP ++N + L ++D ++ R+ + G+ PDL+T+ I + FC
Sbjct: 82 PPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALR 141
Query: 64 ------KMGRVSHGFVVLG---------------RILRSCFTPNAVTFTSLIKGLCAESR 102
G V++ VV G ++L + PN F ++ LC
Sbjct: 142 LLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGD 201
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVD 162
++EA L K+ G N+FTYN I GL G A+ L + M + + V
Sbjct: 202 VLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRA----YAV----- 252
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
PDVVTY ++IRG C + EA L MM+QG P+ T+N I+
Sbjct: 253 ---------------PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTII 297
Query: 223 DELCKNGKMDEASRLLDLMI-------QI----------------------------GVR 247
D CK + EA+ LL + Q+ G++
Sbjct: 298 DGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIK 357
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P+ VYN+L+ G CL G + A ++ M GC + +Y+I+ING CK I A +
Sbjct: 358 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 417
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
+ + KG PDV +NTL + +++ A +L + M G+A DT TY + ++GLCK
Sbjct: 418 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 477
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLID 398
+ E E F+ + + C + YN LI+
Sbjct: 478 AGKVNEVNETFQEMILKGCHPNPITYNILIE 508
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 165/361 (45%), Gaps = 28/361 (7%)
Query: 40 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
F+R++ P YN +++ V R+L + +P+ T T ++ C
Sbjct: 73 FERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCL 132
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEG 159
+R A L L G Y T++ GLY GHT
Sbjct: 133 TARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHT--------------------- 167
Query: 160 FVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 219
A++LF QM ++ P++ + V+ C D EA LL +++ +G+ N+ T+N
Sbjct: 168 --HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYN 225
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
+ + LC+ G++ EA RL+D M V P+ YNTL+ G C A M +
Sbjct: 226 IWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQ 284
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
GC F+Y+ +I+GYCK ++ A L + + KG PD V Y +L L VERA
Sbjct: 285 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 344
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+LF+E Q G+ D Y + + GLC I+ A+++ + C DI+ YN +I+G
Sbjct: 345 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 404
Query: 400 L 400
L
Sbjct: 405 L 405
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 84/206 (40%), Gaps = 32/206 (15%)
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
+ G++ +A + M P A YN +MD ++A +++V M + G + +
Sbjct: 61 ARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDL 120
Query: 286 FSYSILINGYC-------------------------------KNKEIEGALSLYGEMLSK 314
+++I + +C + A L+ +ML
Sbjct: 121 HTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHT 180
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
+ P++ +N + L + V A L ++ + G++ + +TY +I GLC+ + EA
Sbjct: 181 HVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEA 240
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
V L +R D+ YN LI GL
Sbjct: 241 VRLVDGMRAYAVP-DVVTYNTLIRGL 265
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 185/345 (53%), Gaps = 23/345 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ L L + + + + GL D TY +LI+ +CK+G+++ F+V ++
Sbjct: 392 TYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKM 451
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
++ TPN VT+T+L GLC + + A L ++ G E N+FTYN+LINGL + G+
Sbjct: 452 VQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGN- 510
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+++A + M + + PDV TYT++I C + + +
Sbjct: 511 ----------------------LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A LL EM+D+G++P +VT+NV+M+ C +G+++ RLL+ M++ + PN YN+LM
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMK 608
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
+C+ + E++ M S +Y+ILI G+CK + ++ AL + EM+ KG +
Sbjct: 609 QYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRL 668
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
YN L +L + + A +LF++M++D + A+ Y +ID
Sbjct: 669 TASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYID 713
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 190/395 (48%), Gaps = 15/395 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
CS+NIL L LF + S PD+ TY I+++ +C + + +L
Sbjct: 253 TCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLS 309
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ N V +TS+I LC E ++ +A + + + G + + T+++G R G
Sbjct: 310 EMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKG 369
Query: 137 HTIVALNLFEEMAS-GNGEFGV-----------EGFVDKAKELFLQMKDENINPDVVTYT 184
A N F+EM G GV G + +A+ + +M+D+ ++ D VTYT
Sbjct: 370 DLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYT 429
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+I G+C EA + +M+ + V PNVVT+ + D LCK G + A+ LL M
Sbjct: 430 VLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSK 489
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G+ N F YN+L++G C G + +A + M+ G V++Y+ +I C++KE++ A
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
SL EML KGIKP +V YN L +VE +L + M + +T TY + +
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
C + E+++ + + + YN LI G
Sbjct: 610 YCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKG 644
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 157/359 (43%), Gaps = 23/359 (6%)
Query: 40 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
F + GL D TY LIN C+ G + VL + +AVT+T LI G C
Sbjct: 378 FDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCK 437
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEG 159
++ EA + K+ PNV TY L +GL + G A L EM S E
Sbjct: 438 VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL---- 493
Query: 160 FVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 219
++ TY S+I G C A + +A +I+M + G++P+V T+
Sbjct: 494 -------------------NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYT 534
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
I+ LC++ ++D A LL M+ G++P YN LM+GFC++GRV K L M
Sbjct: 535 TIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
+Y+ L+ YC K ++ +Y MLS+ + P+ YN L + ++ A
Sbjct: 595 NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEA 654
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
EM G +Y I L K EA LF +R + + YN ID
Sbjct: 655 LYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYID 713
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 161/327 (49%), Gaps = 22/327 (6%)
Query: 82 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVA 141
F+ + V+F L+ LC + +A L +LR +G P+ + N ++ L A
Sbjct: 193 AFSSDPVSFDLLL--LC-----LPSAPLLLRLRQYGISPSPESCNAVLCRLPLDE----A 241
Query: 142 LNLFEEMASGN--------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ LF+E+ N G + A +LF +M PDVVTY ++ G+C
Sbjct: 242 VQLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTL 298
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
++ A LL EM +G++ N V + ++ LC G++ +A R+++ M+ GV +A V+
Sbjct: 299 SELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVF 358
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
T+M GFC G + A+ F M+ G +Y+ LING C+ E++ A + EM
Sbjct: 359 TTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMED 418
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG+ D V Y L ++ ++ AF + ++M + V + TY DGLCK +
Sbjct: 419 KGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCA 478
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A EL + EL+I YN LI+GL
Sbjct: 479 ANELLHEMCSKGLELNIFTYNSLINGL 505
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 168/388 (43%), Gaps = 42/388 (10%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
S PV SF++L CL L RL G+ P + N ++ C + F
Sbjct: 195 SSDPV-SFDLLLLCLPS-------APLLLRLRQYGISPSPESCNAVL-CRLPLDEAVQLF 245
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
L N ++ L+K LC RI +A LF ++ P+V TY +++G
Sbjct: 246 QELPE-------KNTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGY 295
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
A+ L EMA+ G+E +NP V YTSVI C
Sbjct: 296 CTLSELETAIKLLSEMAAR----GLE-----------------LNP--VAYTSVIALLCD 332
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
++A ++ +M+ GV + F +M C+ G + A D M + G+ +
Sbjct: 333 EGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVT 392
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
Y L++G C G + A+ + ME G +Y++LI+GYCK ++ A ++ +M+
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
K + P+VV Y L L + V A +L EM G+ + +TY + I+GLCK +
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
+A+ + + D+ Y +I L
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGAL 540
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 14/183 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + G L ++K D SL + + G+ P + TYN+L+N FC GRV G +
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRL 587
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L PN T+ SL+K C E + ++ + PN TYN LI G +
Sbjct: 588 LEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCK 647
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENI--NPDV 180
+ AL EM + +A+ LF +M+ + + PDV
Sbjct: 648 ARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDV 707
Query: 181 VTY 183
+
Sbjct: 708 YNF 710
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 193/377 (51%), Gaps = 13/377 (3%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
+ ++L +++ + G P + TYN L+N CKMGR+ +L +I+ + TP+ VT+TSL
Sbjct: 3 EEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 62
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN- 152
I GL E R EA LF ++ + G + Y LI L +TG A ++++ M S
Sbjct: 63 IDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGC 122
Query: 153 -----------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
G + A +F M+ + P+ V Y+++I G C A + A
Sbjct: 123 VPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALE 182
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
+L +M P+ +T+NV++D LCK+G ++ A D M++ G +P+ + YN L+ GFC
Sbjct: 183 MLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFC 242
Query: 262 LTGRVNRAKELFVSMESM-GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
G + A ++ GCT + +Y+ +++ KNK+IE A++L ++ + G P +
Sbjct: 243 KAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTI 302
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
YN L L ++ ++E A L ++ +G D TY + IDGL K EA +LF+
Sbjct: 303 ATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKE 362
Query: 381 LRILKCELDIRAYNCLI 397
+ + LD Y LI
Sbjct: 363 MALRGLALDTVCYTALI 379
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 122/398 (30%), Positives = 193/398 (48%), Gaps = 19/398 (4%)
Query: 2 CIFDYMLNMRPS--PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILI 59
C + + M+ + P ++N+L L K+ + + F + G PD+YTYNILI
Sbjct: 179 CALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILI 238
Query: 60 NCFCKMGRVSHGFVVLGR--ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 117
+ FCK G L + + C T + T+T+++ L +I EA AL K+ G
Sbjct: 239 SGFCKAGNTDAASHSLAQETTINGC-TIDIHTYTAIVDWLAKNKKIEEAVALMEKITANG 297
Query: 118 CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKA 164
C P + TYN L+NGL + G A++L ++ NG G E +A
Sbjct: 298 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD-NGCTPDVVTYTSLIDGLGKEKRSFEA 356
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
+LF +M + D V YT++IR +A + M G P+VVT + ++D
Sbjct: 357 YKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDG 416
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
L K G++ A R+ M G+ PN VY+ L+ G C +++ A E+ M+ CT
Sbjct: 417 LSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPD 476
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
+Y+ILI+G CK+ ++E A + + EML G KPDV YN L + + A +FD
Sbjct: 477 TITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFD 536
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
+M +A+ TY I GLCK + +A F+ ++
Sbjct: 537 DMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMK 574
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 195/434 (44%), Gaps = 48/434 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + + + L+K + +FK + + GL P+ Y+ LI+ CK ++ +
Sbjct: 124 PDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM 183
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ ++ TP+ +T+ LI GLC + A A F ++ GC+P+V+TYN LI+G +
Sbjct: 184 LAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCK 243
Query: 135 TGHTIVALNLFEEMASGNG---------------------EFGVE--------------- 158
G+T A + + + NG E V
Sbjct: 244 AGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIA 303
Query: 159 ------------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
G +++A +L ++ D PDVVTYTS+I G EA L EM
Sbjct: 304 TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM 363
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+G+ + V + ++ EL + GK+ +AS + M G P+ +T++DG GR+
Sbjct: 364 ALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRI 423
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
A +F SME+ G YS LI+G CK ++++ AL + +M PD + YN L
Sbjct: 424 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNIL 483
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
L + VE A FDEM G D +TY I G CK A +F + +C
Sbjct: 484 IDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRC 543
Query: 387 ELDIRAYNCLIDGL 400
++ Y LI GL
Sbjct: 544 SANVVTYGALISGL 557
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 167/347 (48%), Gaps = 13/347 (3%)
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
++ ++ +I + TP T+ +L+ GLC R+ EA L K+ GC P+V TY
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 127 TLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDE 174
+LI+GL + + A LF+EMA E G + +A ++ M
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
PDVVT +++I G A A + M +G+ PN V ++ ++ LCK KMD A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+L M + P+ YN L+DG C +G V A+ F M GC V++Y+ILI+G
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240
Query: 295 YCKNKEIEGAL-SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
+CK + A SL E G D+ Y + L + ++E A L +++ +G
Sbjct: 241 FCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTP 300
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY ++GLCK + EA++L R + C D+ Y LIDGL
Sbjct: 301 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGL 347
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 187/372 (50%), Gaps = 12/372 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L K + +R+ + G PD +TYN +I+ +CK+ V +
Sbjct: 256 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 315
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + F P+ VT+ SLI GLCAE + A LF + + G +P++ YN+L+ GL
Sbjct: 316 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 375
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF---------VDKAKELFLQMKDENIN---PDVVT 182
G + AL + EMA ++ + + + + M D + PDV T
Sbjct: 376 QGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 435
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ ++I G+C + A L+ M + G+ P+ +T+N +++ LCK GK++E + MI
Sbjct: 436 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 495
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G PN YN L++ FC + ++ A ++ V M G S++ LI G+C+N ++E
Sbjct: 496 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 555
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
GA L+ ++ KG +NTL + A K+FDEM G AD++TYR I
Sbjct: 556 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLI 615
Query: 363 DGLCKNSYIVEA 374
DG CK + + A
Sbjct: 616 DGSCKTANVDRA 627
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/451 (27%), Positives = 195/451 (43%), Gaps = 90/451 (19%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC---------- 63
PP ++N + L ++D ++ R+ + G+ PDL+T+ I + FC
Sbjct: 85 PPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALR 144
Query: 64 ------KMGRVSHGFVVLG---------------RILRSCFTPNAVTFTSLIKGLCAESR 102
G V++ VV G ++L + PN F ++ LC
Sbjct: 145 LLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGD 204
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVD 162
++EA L K+ G N+FTYN I GL G A+ L + M + + V
Sbjct: 205 VLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRA----YAV----- 255
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
PDVVTY ++IRG C + EA L MM+QG P+ T+N I+
Sbjct: 256 ---------------PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTII 300
Query: 223 DELCKNGKMDEASRLLDLMI-------QI----------------------------GVR 247
D CK + EA+ LL + Q+ G++
Sbjct: 301 DGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIK 360
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P+ VYN+L+ G CL G + A ++ M GC + +Y+I+ING CK I A +
Sbjct: 361 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 420
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
+ + KG PDV +NTL + +++ A +L + M G+A DT TY + ++GLCK
Sbjct: 421 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 480
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLID 398
+ E E F+ + + C + YN LI+
Sbjct: 481 AGKVNEVNETFQEMILKGCHPNPITYNILIE 511
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 165/361 (45%), Gaps = 28/361 (7%)
Query: 40 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
F+R++ P YN +++ V R+L + +P+ T T ++ C
Sbjct: 76 FERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCL 135
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEG 159
+R A L L G Y T++ GLY GHT
Sbjct: 136 TARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHT--------------------- 170
Query: 160 FVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 219
A++LF QM ++ P++ + V+ C D EA LL +++ +G+ N+ T+N
Sbjct: 171 --HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYN 228
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
+ + LC+ G++ EA RL+D M V P+ YNTL+ G C A M +
Sbjct: 229 IWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQ 287
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
GC F+Y+ +I+GYCK ++ A L + + KG PD V Y +L L VERA
Sbjct: 288 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 347
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+LF+E Q G+ D Y + + GLC I+ A+++ + C DI+ YN +I+G
Sbjct: 348 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 407
Query: 400 L 400
L
Sbjct: 408 L 408
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 84/205 (40%), Gaps = 32/205 (15%)
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
+ G++ +A + M P A YN +MD ++A +++V M + G + +
Sbjct: 65 RAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLH 124
Query: 287 SYSILINGYC-------------------------------KNKEIEGALSLYGEMLSKG 315
+++I + +C + A L+ +ML
Sbjct: 125 THTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTH 184
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ P++ +N + L + V A L ++ + G++ + +TY +I GLC+ + EAV
Sbjct: 185 VFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAV 244
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
L +R D+ YN LI GL
Sbjct: 245 RLVDGMRAYAVP-DVVTYNTLIRGL 268
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 136/469 (28%), Positives = 211/469 (44%), Gaps = 83/469 (17%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+N L +K D LF ++ G+ P++ TY+ LIN CK + V
Sbjct: 151 PDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERV 210
Query: 75 LGRILRSCFTPNAVTFTSLIKG-----------------------------------LCA 99
L +++ + PN +T+ LI G LC
Sbjct: 211 LRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCK 270
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTY---------------------------------- 125
RI EA +F + + G +P+V +Y
Sbjct: 271 HGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHV 330
Query: 126 -NTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMK 172
NTLIN R G +L +FE+M F G +D A E F M
Sbjct: 331 FNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMI 390
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF-NVIMDELCKNGKM 231
D + PD Y+ +I+G C D +AK L+ +M+ +G+ P + F I++ LCK G++
Sbjct: 391 DTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRV 450
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
E ++DL+I G RPN +N+L+DG+CL G + A L SMES+G +++Y+ L
Sbjct: 451 AEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTL 510
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
++GYCK+ I+ AL+L+ +ML K + V YN + LF+ + A ++F EM G+
Sbjct: 511 VDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGM 570
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
A TY T + GLC+N+ EA L L + + DI +N +I +
Sbjct: 571 AVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAM 619
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 188/407 (46%), Gaps = 68/407 (16%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDT-------VLSLFKRLNSTG---LFPDL 52
+FD +L R +P P N L LA+ + LFKR++ P +
Sbjct: 59 LFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPALAVELFKRMDRCACPEAAPTI 118
Query: 53 YTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 112
YTYNILINC+ + R G V GR+LR+
Sbjct: 119 YTYNILINCYRRARRPDLGLPVFGRLLRT------------------------------- 147
Query: 113 LRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMK 172
G P+VF+YN LI+G F EG VDKA +LF +M+
Sbjct: 148 ----GLGPDVFSYNALIDG-----------------------FSKEGEVDKAHDLFYKME 180
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 232
++ I P+VVTY+S+I G C + ++A+ +L +M+ GV+PN +T+N ++ +G
Sbjct: 181 EQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWK 240
Query: 233 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
E+ R+ M + P+ N+ M C GR+ A+++F SM G V SY L+
Sbjct: 241 ESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALL 300
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
+GY I G +L+ M+ +G+ PD ++NTL + ++++ +F++M + GV
Sbjct: 301 HGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVN 360
Query: 353 ADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
D T+ T I C+ + +A+E F + D Y+CLI G
Sbjct: 361 PDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQG 407
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 187/408 (45%), Gaps = 14/408 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IFD M+ P P V S+ L A + +LF + G+ PD + +N LIN +
Sbjct: 280 IFDSMVLKGPKPD-VISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAY 338
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
++G + ++ + + P+ +TF+++I C R+ +A F + G P+
Sbjct: 339 ARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDT 398
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN-------------GEFGVEGFVDKAKELFL 169
Y+ LI G + A L +M S EG V + K++
Sbjct: 399 AVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVD 458
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+ P+++T+ S++ G+C + EA LL M GV+P++ T+N ++D CK+G
Sbjct: 459 LIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHG 518
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
++D+A L M+ V + YN ++ G R AKE+F M G ++ +Y+
Sbjct: 519 RIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYA 578
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
++ G C+N + A L ++ S +K D++ +N + +F++ + + A +LF +
Sbjct: 579 TVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTY 638
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
G+ TYR I L K +A LF ++ C D R N +I
Sbjct: 639 GLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEII 686
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 169/384 (44%), Gaps = 29/384 (7%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPD-LYTYNILINCF 62
F++M++ PP ++ L + L + S G+ P + + +IN
Sbjct: 386 FNHMIDTG-VPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNL 444
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK GRV+ G V+ I+ + PN +TF SL+ G C + EA L + G EP++
Sbjct: 445 CKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDI 504
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+TYNTL++G + G +D A LF M + + V+
Sbjct: 505 YTYNTLVDGYCKHGR-----------------------IDDALTLFRDMLHKRVTLTSVS 541
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++ G A AK + EM++ G+ ++ T+ ++ LC+N DEA+ LL+ +
Sbjct: 542 YNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLF 601
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ V+ + +N ++ GR AKELF ++ + G T+ +Y ++I K + E
Sbjct: 602 SMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFE 661
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A +L+ M PD I N + +L +V +A ++ + G+ + T I
Sbjct: 662 DADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLI 721
Query: 363 DGLCKN----SYIVEAVELFRTLR 382
N YI E +R LR
Sbjct: 722 YLFSVNGKYREYIKLLPEKYRFLR 745
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 38/135 (28%)
Query: 269 AKELFVSMESMGCTH---TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
A ELF M+ C T+++Y+ILIN Y + + + L ++G +L
Sbjct: 99 AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLL------------- 145
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
R G+ D ++Y IDG K + +A +LF +
Sbjct: 146 ----------------------RTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQG 183
Query: 386 CELDIRAYNCLIDGL 400
++ Y+ LI+GL
Sbjct: 184 IMPNVVTYSSLINGL 198
>gi|297727717|ref|NP_001176222.1| Os10g0495400 [Oryza sativa Japonica Group]
gi|255679525|dbj|BAH94950.1| Os10g0495400, partial [Oryza sativa Japonica Group]
Length = 438
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 195/390 (50%), Gaps = 20/390 (5%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG---LFPDLYTYNILINCFCK 64
L +R + SFN +A++ V SLF R+ G + PDL TY+ILI C C+
Sbjct: 49 LPLRGWGASIYSFNRTLTDVARDSPAAAV-SLFNRMARAGADEVTPDLCTYSILIGCCCR 107
Query: 65 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPNVF 123
GR+ GF LG +++ F A+TF L+KGLCA+ R +A + ++ C P+VF
Sbjct: 108 AGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVF 167
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGE---------------FGVEGFVDKAKELF 168
+ L+ GL + AL L MA G F EG DKA +
Sbjct: 168 SCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTY 227
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+M D I+P+VVTY+S+I C A ++A +L M+ GV P+ +T+N I+ C +
Sbjct: 228 HEMLDRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS 287
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G+ EA L M GV PN Y +LM+ C GR A+++F SM G + +Y
Sbjct: 288 GQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIATY 347
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
L+ GY + +L M+ GI+PD ++N L + +V++A +F +M++
Sbjct: 348 RTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQ 407
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
G+ + Y T ID LCK+ + +A+ F
Sbjct: 408 HGLNPNVVCYGTVIDVLCKSGSVDDAMLYF 437
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 141/323 (43%), Gaps = 25/323 (7%)
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
R P+A T+ G S A + +L + G +++++N + + R
Sbjct: 16 RGGGVPSAQGGTTQDLGRAGGSGTEGARHVLDELPLRGWGASIYSFNRTLTDVARD-SPA 74
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
A++LF MA + + PD+ TY+ +I C A +
Sbjct: 75 AAVSLFNRMARAGAD--------------------EVTPDLCTYSILIGCCCRAGRLDLG 114
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL-LDLMIQIGVRPNAFVYNTLMD 258
L ++ +G + +TF ++ LC + + +A + L M ++ P+ F L+
Sbjct: 115 FAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLK 174
Query: 259 GFCLTGRVNRAKELFVSM---ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
G C R A EL M G V SY+ +ING+ K + + A S Y EML +
Sbjct: 175 GLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRR 234
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
I P+VV Y+++ L + +++A ++ + M ++GV D TY + + G C + EA+
Sbjct: 235 ISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAI 294
Query: 376 ELFRTLRILKCELDIRAYNCLID 398
+ +R E ++ Y L++
Sbjct: 295 GTLKKMRSDGVEPNVVTYRSLMN 317
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IFD M R P + ++ L A + +L + G+ PD + +NILI +
Sbjct: 331 IFDSMTK-RGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAY 389
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 110
K +V +V ++ + PN V + ++I LC + +A F
Sbjct: 390 AKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYF 437
>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
Length = 440
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 121/375 (32%), Positives = 187/375 (49%), Gaps = 19/375 (5%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNST---GLFPDLYTYNILINCFCKMGRVSHGFVVL 75
S N +A++ V S F R+ + + P L+TY ILI C C+ GR+ GF L
Sbjct: 63 SLNRALAAVARDSPAAAV-SGFNRMARSSDGAVTPTLHTYGILIGCCCRAGRLDLGFAGL 121
Query: 76 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPNVFTYNTLINGLYR 134
G +++ + + FT L+K LCAE R A + ++ GC P+VF+YN L+ GL
Sbjct: 122 GNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCH 181
Query: 135 TGHTIVALNLFEEMASGNGE--------------FGVEGFVDKAKELFLQMKDENINPDV 180
+ AL L MA G+ EG DKA + +M + I PDV
Sbjct: 182 ESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDV 241
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY +++ C A ++A +L M+ GV P+ +T+N I+ C +G+ EA +L+
Sbjct: 242 VTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEK 301
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M GV P+A Y +LMD C GR A+++ SM G V +YS L++GY
Sbjct: 302 MCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGA 361
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ L M+ GI+PD +++ L + V+ A +F +M++ + D TY T
Sbjct: 362 LVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTYGT 421
Query: 361 FIDGLCKNSYIVEAV 375
IDGLCK+ + +A+
Sbjct: 422 LIDGLCKSGRVDDAM 436
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 123/256 (48%), Gaps = 23/256 (8%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP V S++ + L K D S + + G+ PD+ TYN ++ CK +
Sbjct: 203 PPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMD 262
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
VL R++++ P+ +T+ S++ G C+ + EA + K+ G EP+ TY +L++ L
Sbjct: 263 VLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLC 322
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ G I +A+++ M + P+V+TY++++ G+
Sbjct: 323 KNGRCI-----------------------EARKILDSMIKRGLKPNVITYSTLLHGYATK 359
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
E + LL M+ G+QP+ F++++ K+ +D A + M Q + P+ Y
Sbjct: 360 GALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTY 419
Query: 254 NTLMDGFCLTGRVNRA 269
TL+DG C +GRV+ A
Sbjct: 420 GTLIDGLCKSGRVDDA 435
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 112/246 (45%), Gaps = 8/246 (3%)
Query: 156 GVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNV 215
V GF A+ D + P + TY +I C A + L ++ +G +
Sbjct: 79 AVSGFNRMARS-----SDGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEP 133
Query: 216 VTFNVIMDELCKNGKMDEASRL-LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
+ F ++ LC + A + L M ++G P+ F YN L+ G C R A EL
Sbjct: 134 IIFTPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLH 193
Query: 275 SMESMG--CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
M G C V SYS +I+G K + + A S Y EML +GI PDVV YNT+ L +
Sbjct: 194 MMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCK 253
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
+++A + + M ++GV D TY + + G C + EA+ + + E D
Sbjct: 254 AQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVT 313
Query: 393 YNCLID 398
Y L+D
Sbjct: 314 YTSLMD 319
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 140/321 (43%), Gaps = 31/321 (9%)
Query: 87 AVTFTSLIKGLCAESRIMEAAAL-----FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVA 141
A SL + L A +R AAA+ + P + TY LI R G
Sbjct: 58 ASIIRSLNRALAAVARDSPAAAVSGFNRMARSSDGAVTPTLHTYGILIGCCCRAGRL--- 114
Query: 142 LNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
+ G G + K+ + + P + +T +++ C + A
Sbjct: 115 ------------DLGFAGLGNVIKKGY------RVEP--IIFTPLLKSLCAEKRTSNAMN 154
Query: 202 LLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG--VRPNAFVYNTLMD 258
+++ M + G P+V ++N+++ LC + EA LL +M G P+ Y+T++D
Sbjct: 155 IVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIID 214
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G G ++A + M G V +Y+ ++ CK + ++ A+ + M+ G+ P
Sbjct: 215 GLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMP 274
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
D + YN++ Q + A + ++M DGV D TY + +D LCKN +EA ++
Sbjct: 275 DCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKIL 334
Query: 379 RTLRILKCELDIRAYNCLIDG 399
++ + ++ Y+ L+ G
Sbjct: 335 DSMIKRGLKPNVITYSTLLHG 355
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVL 75
F+IL K+++ D + +F ++ L PD+ TY LI+ CK GRV + L
Sbjct: 384 FSILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSGRVDDAMLNL 439
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 211/420 (50%), Gaps = 25/420 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD ML R P V +FN L L K L ++ G+ P+L+T+NI +
Sbjct: 203 LFDEML-ARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGL 261
Query: 63 CKMG---------RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL 113
C+ G RV L +++ F P+ +T+ S+I G C + + +A +
Sbjct: 262 CREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDA 321
Query: 114 RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG-------------EFGVEGF 160
G +P+ FTY +LING + G A+ +F++ G G +G
Sbjct: 322 VFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKD-GLGKGLRPSIVLYNTLIKGLSQQGL 380
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+ A +L +M + P++ TY VI G C ++A L+ + + +G P++ T+N
Sbjct: 381 ILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNT 440
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
++D CK K+D A+ +++ M G+ P+ YNTL++G C G+ E+F +ME G
Sbjct: 441 LIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKG 500
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
CT + +Y+I+++ CK K++ A+ L GEM SKG+KPDVV + TLF +I ++ A+
Sbjct: 501 CTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAY 560
Query: 341 KLFDEMQRD-GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+LF M++ V T TY + + + A++LF ++ C+ D Y +IDG
Sbjct: 561 QLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDG 620
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 176/373 (47%), Gaps = 32/373 (8%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 95
+ F+R++ P ++++N ++N + G + V R+ + T+T IK
Sbjct: 95 AVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIK 154
Query: 96 GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEF 155
C +R A L + GC+ N Y T++ GLY +G
Sbjct: 155 SFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEH----------------- 197
Query: 156 GVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNV 215
D A+ELF +M + PDVV + ++ C E++ LL +++ +GV PN+
Sbjct: 198 ------DHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNL 251
Query: 216 VTFNVIMDELCKNGKMD---------EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
TFN+ + LC+ G +D EA L M+ G P+ YN+++DG+C G V
Sbjct: 252 FTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMV 311
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
A + G F+Y LING+CK+ + + A++++ + L KG++P +V+YNTL
Sbjct: 312 QDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTL 371
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
L + + A +L +EM +G + WTY I+GLCK + +A L C
Sbjct: 372 IKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGC 431
Query: 387 ELDIRAYNCLIDG 399
DI YN LIDG
Sbjct: 432 PPDIFTYNTLIDG 444
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 193/421 (45%), Gaps = 49/421 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR------- 67
P V S N + L + +++ ++ R+ G+ D+YTY I I FCK R
Sbjct: 109 PSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRL 168
Query: 68 -------------VSHGFVVLG---------------RILRSCFTPNAVTFTSLIKGLCA 99
V++ VV G +L C P+ V F L+ LC
Sbjct: 169 LRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCK 228
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEG 159
+ + E+ L K+ G PN+FT+N + GL R G A+
Sbjct: 229 KGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVR--------------NS 274
Query: 160 FVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 219
V +A+E +M + PD +TY S+I G+C +A +L + + +G +P+ T+
Sbjct: 275 RVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYC 334
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
+++ CK+G D A + + G+RP+ +YNTL+ G G + A +L M
Sbjct: 335 SLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAEN 394
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
GC +++Y+++ING CK + A L + ++KG PD+ YNTL + +++ A
Sbjct: 395 GCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSA 454
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
++ + M G+ D TY T ++GLCK E +E+F+ + C +I YN ++D
Sbjct: 455 TEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDS 514
Query: 400 L 400
L
Sbjct: 515 L 515
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 178/349 (51%), Gaps = 15/349 (4%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G PD +TY LIN FCK G V L P+ V + +LIKGL + I+ A
Sbjct: 325 GFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPA 384
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE-MASG------NGEFGVEG 159
L ++ GC PN++TYN +INGL + G A +L ++ +A G ++G
Sbjct: 385 LQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDG 444
Query: 160 F-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
+ +D A E+ +M + + PDV+TY +++ G C A E + M ++G PN
Sbjct: 445 YCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPN 504
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
++T+N+I+D LCK K++EA LL M G++P+ + TL GFC G ++ A +LF
Sbjct: 505 IITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFR 564
Query: 275 SMESM-GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
ME HT +Y+I+++ + + + A+ L+ M + G PD Y + ++
Sbjct: 565 RMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKM 624
Query: 334 HQVERAFK-LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+ + +K L + M++ + + T T+ ++ LC + EAV + +
Sbjct: 625 GNITQGYKFLLENMEKRFIPSLT-TFGRVLNCLCVKDKVHEAVGIIHLM 672
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 171/364 (46%), Gaps = 18/364 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +N L L++ L L + G P+++TYN++IN CKMG VS +
Sbjct: 363 PSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHL 422
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + P+ T+ +LI G C + ++ A + ++ G P+V TYNTL+NGL +
Sbjct: 423 VDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCK 482
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
G + + +F+ M + + V++A +L +MK + + PDVV+
Sbjct: 483 AGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVS 542
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+ ++ GFC D + A L M Q V T+N+I+ + M+ A +L +M
Sbjct: 543 FGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVM 602
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
G P+ + Y ++DGFC G + + + + ++ ++ ++N C ++
Sbjct: 603 KNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKV 662
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A+ + ML KGI P+ V NT+F ++ + L +++ + G A +TY
Sbjct: 663 HEAVGIIHLMLQKGIVPETV--NTIFEADKKVVAAPKI--LVEDLLKKGHIA-YYTYELL 717
Query: 362 IDGL 365
DG+
Sbjct: 718 YDGI 721
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 120/248 (48%), Gaps = 13/248 (5%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + ++N L K D+ + R+ S G+ PD+ TYN L+N CK G+
Sbjct: 432 PPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVME 491
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ + TPN +T+ ++ LC ++ EA L +++ G +P+V ++ TL G
Sbjct: 492 IFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFC 551
Query: 134 RTGHTIVALNLFEEM----------ASGN---GEFGVEGFVDKAKELFLQMKDENINPDV 180
+ G A LF M A+ N F + ++ A +LF MK+ +PD
Sbjct: 552 KIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDN 611
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
TY VI GFC + + L+E M++ P++ TF +++ LC K+ EA ++ L
Sbjct: 612 YTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHL 671
Query: 241 MIQIGVRP 248
M+Q G+ P
Sbjct: 672 MLQKGIVP 679
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 122/257 (47%), Gaps = 12/257 (4%)
Query: 154 EFGVEGFVDKAKELFLQMKDENINPDVV--TYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
+ G G ++ ++L +M+ EN+N ++ Y ++ + EA M
Sbjct: 49 KLGHHGEFEEMEKLLSEMR-ENVNNALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNC 107
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
P+V + N IM+ L + G ++A ++ M GV+ + + Y + FC T R A
Sbjct: 108 DPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALR 167
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
L +M +GC +Y ++ G + E + A L+ EML++ + PDVV +N L VL
Sbjct: 168 LLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLC 227
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC---------KNSYIVEAVELFRTLR 382
+ V + +L ++ + GV + +T+ F+ GLC +NS +VEA E R +
Sbjct: 228 KKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMV 287
Query: 383 ILKCELDIRAYNCLIDG 399
E D YN +IDG
Sbjct: 288 NGGFEPDDLTYNSIIDG 304
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 79/193 (40%), Gaps = 34/193 (17%)
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+ G + T+ I+ +L +G+ +E +LL M R N V N L++G
Sbjct: 33 EDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEM-----REN--VNNALLEG-------- 77
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
+Y + Y + +++ A+ + M P V +N +
Sbjct: 78 -------------------AYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIM 118
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
+L E +A K++ M+ GV +D +TY I CK + A+ L R + L C+
Sbjct: 119 NILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCD 178
Query: 388 LDIRAYNCLIDGL 400
+ AY ++ GL
Sbjct: 179 SNAVAYCTVVAGL 191
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 123/395 (31%), Positives = 194/395 (49%), Gaps = 12/395 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V + NI+ L KN+ + S + G+FPD+ TYN LIN +C+ G + F ++
Sbjct: 358 VYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMD 417
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ P T+ ++I GLC + + A + ++ G P+ TYN L+ R
Sbjct: 418 SMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRND 477
Query: 137 HTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
+ + A +F+EM S G G +D+A + F MK+ + PD V YT
Sbjct: 478 NMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYT 537
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+I GFC +EA + EM++QG +VVT+N I++ LCK + EA L M +
Sbjct: 538 ILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTER 597
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
GV P+ + + TL++G+ G +N+A LF M V +Y+ LI+G+CK E+E
Sbjct: 598 GVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKV 657
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L+ +M+S+ I P+ + Y L + V AF+L+DEM G A T T + G
Sbjct: 658 NELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 717
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
C+ V+A E + + D YN LI+G
Sbjct: 718 YCRAGNAVKADEFLSNMLLKGIVPDGITYNTLING 752
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/375 (30%), Positives = 185/375 (49%), Gaps = 30/375 (8%)
Query: 3 IFDYMLNMRPSP---PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILI 59
IFD M PS P + SF+ L G L+KN D L F+ + + GL PD Y ILI
Sbjct: 485 IFDEM----PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILI 540
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 119
FC+ G +S V +L + VT+ +++ GLC E + EA LFT++ G
Sbjct: 541 GGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF 600
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPD 179
P+ +T+ TLING + G+ ++KA LF M N+ PD
Sbjct: 601 PDFYTFTTLINGYXKDGN-----------------------MNKAVTLFEMMIQRNLKPD 637
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
VVTY ++I GFC ++ + L +M+ + + PN +++ ++++ C G + EA RL D
Sbjct: 638 VVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWD 697
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M++ G NT++ G+C G +A E +M G +Y+ LING+ K +
Sbjct: 698 EMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEE 757
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++ A +L +M + G+ PDV+ YN + +++ A + +M GV D TY
Sbjct: 758 NMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYT 817
Query: 360 TFIDGLCKNSYIVEA 374
+ I+G + + EA
Sbjct: 818 SLINGHVTQNNLKEA 832
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 187/397 (47%), Gaps = 24/397 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D ML + SP ++NIL +N + +F + S G+ PDL +++ LI
Sbjct: 450 VLDEMLKIGMSPD-TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLL 508
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K G + + + P+ V +T LI G C + EA + ++ GC +V
Sbjct: 509 SKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDV 568
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TYNT++NGL + E + +A ELF +M + + PD T
Sbjct: 569 VTYNTILNGLCK-----------------------EKMLSEADELFTEMTERGVFPDFYT 605
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+T++I G+ + N+A L M+ + ++P+VVT+N ++D CK +M++ + L + MI
Sbjct: 606 FTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMI 665
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ PN Y L++G+C G V+ A L+ M G T+ + + ++ GYC+
Sbjct: 666 SRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAV 725
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A ML KGI PD + YNTL + ++RAF L ++M+ G+ D TY +
Sbjct: 726 KADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVIL 785
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+G + + EA + + D Y LI+G
Sbjct: 786 NGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLING 822
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 111/360 (30%), Positives = 174/360 (48%), Gaps = 23/360 (6%)
Query: 40 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
F+ L S GL + N L+ K+G V + + ++RS N T +I LC
Sbjct: 311 FRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCK 370
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEG 159
+I + + + G P+V TYNTLIN R +G
Sbjct: 371 NQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCR-----------------------QG 407
Query: 160 FVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 219
+++A EL M + + P V TY ++I G C + AK +L EM+ G+ P+ T+N
Sbjct: 408 LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN 467
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
+++ E C+N M +A R+ D M GV P+ ++ L+ G +++A + F M++
Sbjct: 468 ILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA 527
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G Y+ILI G+C+N + AL + EML +G DVV YNT+ L + + A
Sbjct: 528 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEA 587
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+LF EM GV D +T+ T I+G K+ + +AV LF + + D+ YN LIDG
Sbjct: 588 DELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDG 647
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 157/315 (49%), Gaps = 23/315 (7%)
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
N + F L++ ++ E F L+ G ++ N+L+ GL + G
Sbjct: 287 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVG--------- 337
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
+VD A E++ ++ + +V T +I C K L +
Sbjct: 338 --------------WVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSD 383
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M ++GV P+VVT+N +++ C+ G ++EA L+D M G++P F YN +++G C TG+
Sbjct: 384 MEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGK 443
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
RAK + M +G + +Y+IL+ C+N + A ++ EM S+G+ PD+V ++
Sbjct: 444 YLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 503
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L +L + +++A K F +M+ G+A D Y I G C+N + EA+++ +
Sbjct: 504 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 563
Query: 386 CELDIRAYNCLIDGL 400
C LD+ YN +++GL
Sbjct: 564 CXLDVVTYNTILNGL 578
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 104/223 (46%)
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
N + + + ++R + A E + +G+ ++ N ++ L K G +D A
Sbjct: 283 NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 342
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+ +++ GV+ N + N +++ C ++ K ME G V +Y+ LIN
Sbjct: 343 WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 402
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
YC+ +E A L M KG+KP V YN + L + + RA + DEM + G++ D
Sbjct: 403 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 462
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
T TY + C+N +++A +F + D+ +++ LI
Sbjct: 463 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI 505
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 126/386 (32%), Positives = 194/386 (50%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S N L L+K+ LS FK + GL P ++TYN++I C + G + +
Sbjct: 214 PKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSL 273
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ P+ VT+ SLI G + A ++F +++ GCEP+V TYN+LIN +
Sbjct: 274 FEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCK 333
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
FE + +A E MK + P+VVTY+++I FC A
Sbjct: 334 ----------FER-------------IPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAG 370
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EA ++M+ G+QPN T+ ++D CK G ++EA +L M Q GV N Y
Sbjct: 371 MLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYT 430
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DG C GR+ A+ELF ++ G T Y+ L +GY K K +E A+ + EM K
Sbjct: 431 ALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKK 490
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
+KPD+++Y T L +++E + + EM G+ A+++ Y T ID K EA
Sbjct: 491 NLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEA 550
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
V L + ++ L ++ + Y LIDGL
Sbjct: 551 VNLLQEMQDLGIKITVVTYGVLIDGL 576
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 195/397 (49%), Gaps = 12/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N L K +S+F+ + G PD+ TYN LINCFCK R+ F
Sbjct: 284 PDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEY 343
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + PN VT+++LI C ++EA F + G +PN FTY +LI+ +
Sbjct: 344 LHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCK 403
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G A L EM + +G + +A+ELF + +
Sbjct: 404 IGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQI 463
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YTS+ G+ A +A +L EM + ++P+++ + + LC+ +++++ ++ M+
Sbjct: 464 YTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMM 523
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ N+++Y TL+D + G+ A L M+ +G TV +Y +LI+G CK ++
Sbjct: 524 DCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQ 583
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ + M G++P+++IY L L + +E A LF+EM G++ D Y + I
Sbjct: 584 QAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLI 643
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
DG K+ EA+ L + + ELD+ AY LI G
Sbjct: 644 DGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWG 680
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 174/423 (41%), Gaps = 82/423 (19%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L C K + + GL P++ TY+ LI+ FCK G +
Sbjct: 319 PDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKF 378
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++R PN T+TSLI C + EA L ++++ G N+ TY L++GL
Sbjct: 379 FVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCE 438
Query: 135 TGHTIVALNLFEEMASGNGEFGVE-------GFV-----DKAKELFLQMKDENINPDVVT 182
G A LF + + G++ +KA ++ +M +N+ PD++
Sbjct: 439 DGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLL 498
Query: 183 YTSVIRGFCYAND-----------------------------------WNEAKCLLIEMM 207
Y + I G C N+ EA LL EM
Sbjct: 499 YGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQ 558
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
D G++ VVT+ V++D LCK G + +A R D M + G++PN +Y L+DG C +
Sbjct: 559 DLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLE 618
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL-------------------- 307
AK LF M G + Y+ LI+G K+ ALSL
Sbjct: 619 EAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLI 678
Query: 308 -----YG----------EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
YG EML KGI PD V+ L +E+ + A L D+M R G+
Sbjct: 679 WGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLI 738
Query: 353 ADT 355
+ T
Sbjct: 739 SGT 741
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%)
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
+P F+ + + L G ++EA + M + V P N L+ + + A
Sbjct: 178 RPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALS 237
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
F M G + +VF+Y+++I + ++E A SL+ EM +KG++PD+V YN+L
Sbjct: 238 FFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYG 297
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIR 391
++ + A +F+EM+ G D TY + I+ CK I +A E ++ + ++
Sbjct: 298 KVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVV 357
Query: 392 AYNCLIDG 399
Y+ LID
Sbjct: 358 TYSTLIDA 365
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 12/197 (6%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 95
++L + + G+ + TY +LI+ CK+G V + R+ PN + +T+LI
Sbjct: 550 AVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALID 609
Query: 96 GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE- 154
GLC + EA LF ++ G P+ Y +LI+G + G+ AL+L M E
Sbjct: 610 GLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMEL 669
Query: 155 -----------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
F G V AK L +M + I PD V ++R + D NEA L
Sbjct: 670 DLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALH 729
Query: 204 IEMMDQGVQPNVVTFNV 220
+M +G+ + V
Sbjct: 730 DDMARRGLISGTIDITV 746
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 123/395 (31%), Positives = 194/395 (49%), Gaps = 12/395 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V + NI+ L KN+ + S + G+FPD+ TYN LIN +C+ G + F ++
Sbjct: 254 VYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMD 313
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ P T+ ++I GLC + + A + ++ G P+ TYN L+ R
Sbjct: 314 SMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRND 373
Query: 137 HTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
+ + A +F+EM S G G +D+A + F MK+ + PD V YT
Sbjct: 374 NMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYT 433
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+I GFC +EA + EM++QG +VVT+N I++ LCK + EA L M +
Sbjct: 434 ILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTER 493
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
GV P+ + + TL++G+ G +N+A LF M V +Y+ LI+G+CK E+E
Sbjct: 494 GVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKV 553
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L+ +M+S+ I P+ + Y L + V AF+L+DEM G A T T + G
Sbjct: 554 NELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 613
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
C+ V+A E + + D YN LI+G
Sbjct: 614 YCRAGNAVKADEFLSNMLLKGIVPDGITYNTLING 648
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/375 (30%), Positives = 185/375 (49%), Gaps = 30/375 (8%)
Query: 3 IFDYMLNMRPSP---PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILI 59
IFD M PS P + SF+ L G L+KN D L F+ + + GL PD Y ILI
Sbjct: 381 IFDEM----PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILI 436
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 119
FC+ G +S V +L + VT+ +++ GLC E + EA LFT++ G
Sbjct: 437 GGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF 496
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPD 179
P+ +T+ TLING + +G ++KA LF M N+ PD
Sbjct: 497 PDFYTFTTLING-----------------------YSKDGNMNKAVTLFEMMIQRNLKPD 533
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
VVTY ++I GFC ++ + L +M+ + + PN +++ ++++ C G + EA RL D
Sbjct: 534 VVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWD 593
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M++ G NT++ G+C G +A E +M G +Y+ LING+ K +
Sbjct: 594 EMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEE 653
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++ A +L +M + G+ PDV+ YN + +++ A + +M GV D TY
Sbjct: 654 NMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYT 713
Query: 360 TFIDGLCKNSYIVEA 374
+ I+G + + EA
Sbjct: 714 SLINGHVTQNNLKEA 728
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 187/397 (47%), Gaps = 24/397 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D ML + SP ++NIL +N + +F + S G+ PDL +++ LI
Sbjct: 346 VLDEMLKIGMSPD-TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLL 404
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K G + + + P+ V +T LI G C + EA + ++ GC +V
Sbjct: 405 SKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDV 464
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TYNT++NGL + E + +A ELF +M + + PD T
Sbjct: 465 VTYNTILNGLCK-----------------------EKMLSEADELFTEMTERGVFPDFYT 501
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+T++I G+ + N+A L M+ + ++P+VVT+N ++D CK +M++ + L + MI
Sbjct: 502 FTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMI 561
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ PN Y L++G+C G V+ A L+ M G T+ + + ++ GYC+
Sbjct: 562 SRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAV 621
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A ML KGI PD + YNTL + ++RAF L ++M+ G+ D TY +
Sbjct: 622 KADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVIL 681
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+G + + EA + + D Y LI+G
Sbjct: 682 NGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLING 718
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 111/360 (30%), Positives = 174/360 (48%), Gaps = 23/360 (6%)
Query: 40 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
F+ L S GL + N L+ K+G V + + ++RS N T +I LC
Sbjct: 207 FRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCK 266
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEG 159
+I + + + G P+V TYNTLIN R +G
Sbjct: 267 NQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCR-----------------------QG 303
Query: 160 FVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 219
+++A EL M + + P V TY ++I G C + AK +L EM+ G+ P+ T+N
Sbjct: 304 LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN 363
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
+++ E C+N M +A R+ D M GV P+ ++ L+ G +++A + F M++
Sbjct: 364 ILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA 423
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G Y+ILI G+C+N + AL + EML +G DVV YNT+ L + + A
Sbjct: 424 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEA 483
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+LF EM GV D +T+ T I+G K+ + +AV LF + + D+ YN LIDG
Sbjct: 484 DELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDG 543
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 157/315 (49%), Gaps = 23/315 (7%)
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
N + F L++ ++ E F L+ G ++ N+L+ GL + G
Sbjct: 183 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVG--------- 233
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
+VD A E++ ++ + +V T +I C K L +
Sbjct: 234 --------------WVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSD 279
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M ++GV P+VVT+N +++ C+ G ++EA L+D M G++P F YN +++G C TG+
Sbjct: 280 MEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGK 339
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
RAK + M +G + +Y+IL+ C+N + A ++ EM S+G+ PD+V ++
Sbjct: 340 YLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 399
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L +L + +++A K F +M+ G+A D Y I G C+N + EA+++ +
Sbjct: 400 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 459
Query: 386 CELDIRAYNCLIDGL 400
C LD+ YN +++GL
Sbjct: 460 CVLDVVTYNTILNGL 474
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 104/223 (46%)
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
N + + + ++R + A E + +G+ ++ N ++ L K G +D A
Sbjct: 179 NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 238
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+ +++ GV+ N + N +++ C ++ K ME G V +Y+ LIN
Sbjct: 239 WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 298
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
YC+ +E A L M KG+KP V YN + L + + RA + DEM + G++ D
Sbjct: 299 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 358
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
T TY + C+N +++A +F + D+ +++ LI
Sbjct: 359 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI 401
>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 732
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 213/412 (51%), Gaps = 23/412 (5%)
Query: 10 MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS 69
MR SP IL G L + + +D+V ++ + S GL PD++ Y++L C K G S
Sbjct: 192 MRCSPDSKACLAILNG-LVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPS 250
Query: 70 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
+L + PN +T I+ LC E+++ EA +F +++ G PN++TY+ +I
Sbjct: 251 KKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMI 310
Query: 130 NGLYRTGHTIVALNLFEEMASGN-----GEFG--VEGFVDK-----AKELFLQMKDENIN 177
+G +TG+ A L++E+ FG V+GF A+ LF+ M ++
Sbjct: 311 DGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVD 370
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P++ Y +I G C + + EA LL EM + P+V T+ ++++ LC ++ EA+RL
Sbjct: 371 PNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRL 430
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
M + P++ YN+L+ GFC + +A +L M S G + ++S LI+GYCK
Sbjct: 431 FQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCK 490
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+ I+ A+ LY EM KGI PDVV Y TL F+ ++ A +L+ +M G+ + T
Sbjct: 491 VRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHT 550
Query: 358 YRTFIDGLCKNSYIVEAVELF---------RTLRILKCELDIRAYNCLIDGL 400
+ +DG K + +A++ + +++ C + + CLI+GL
Sbjct: 551 FACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYV-GFTCLIEGL 601
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 175/408 (42%), Gaps = 91/408 (22%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + I L + + +F+ + G+ P+LYTY+ +I+ +CK G + + +
Sbjct: 266 PNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGL 325
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
IL + PN V F +L+ G C ++ A +LF + FG +PN++ YN LI+G +
Sbjct: 326 YKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCK 385
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
+G+ + A+ L EM S N V E + +A LF +MK+E I P VT
Sbjct: 386 SGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVT 445
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK--------------- 227
Y S+I GFC + +A L EM GV+PN++TF+ ++D CK
Sbjct: 446 YNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMT 505
Query: 228 --------------------NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF------- 260
M EA RL M++ G+ PN + L+DGF
Sbjct: 506 IKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLS 565
Query: 261 ------------------------------------CLTGRVNRAKELFVSMESMGCTHT 284
C G + RA F M+S G T
Sbjct: 566 DAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPD 625
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
++SY ++ + + K I + L+ +M+ GI P++++ N L + ++
Sbjct: 626 IWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNLMV-NQLLAMFYQ 672
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 138/345 (40%), Gaps = 55/345 (15%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V F L K + SLF + G+ P+LY YN LI+ CK G + +
Sbjct: 336 PNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGL 395
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + +P+ T+T LI GLC E R+ EA LF +++ P+ TYN+LI+G +
Sbjct: 396 LSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCK 455
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
+ AL+L EM S E + F + A L+ +M + I PDVVT
Sbjct: 456 EYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVT 515
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE------------------ 224
YT++I + EA L +M++ G+ PN TF ++D
Sbjct: 516 YTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENN 575
Query: 225 -------------------------LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
LC+NG + ASR M GV P+ + Y +++
Sbjct: 576 QAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKA 635
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
R+ L M G + +L Y +N + A
Sbjct: 636 HLREKRITDTMMLHCDMIKTGILPNLMVNQLLAMFYQENGYLRSA 680
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 113/252 (44%), Gaps = 21/252 (8%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M N R P V ++N L K + + L L + S+G+ P++ T++ LI+ +
Sbjct: 430 LFQRMKNERIFPSSV-TYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGY 488
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK+ + + + P+ VT+T+LI E+ + EA L++ + G PN
Sbjct: 489 CKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPND 548
Query: 123 FTYNTLINGLYRTGHTIVALNLF-EEMASGNGEFGVE-------------------GFVD 162
T+ L++G ++ G A++ + E + G+ V+ G++
Sbjct: 549 HTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYIL 608
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
+A F MK + PD+ +Y S+++ + L +M+ G+ PN++ ++
Sbjct: 609 RASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNLMVNQLLA 668
Query: 223 DELCKNGKMDEA 234
+NG + A
Sbjct: 669 MFYQENGYLRSA 680
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 130/444 (29%), Positives = 213/444 (47%), Gaps = 57/444 (12%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P P + +F ++ L + K D S+ +R G PD TYN+ I+ CK RV
Sbjct: 2 PCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDA 61
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
F +L ++ P VT+T+L+ GL R+ EA A+ ++ G P + TY +I+G
Sbjct: 62 FQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDG 121
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGFV-----------DKAKELFLQMKDENIN--- 177
L + G A +F +M GNG + FV K +E + K+ N
Sbjct: 122 LSKAGRVEEARRIFVDML-GNG-CRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHH 179
Query: 178 ----PDVVTYTSVIRGFCYANDWNEAKCLLI-EMMDQGVQPNVVTFNVIMDELCKNGKMD 232
PDVVTYTS+I G C A EA+ + E +++G P+ VT+ I+D LCK G+++
Sbjct: 180 ATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVE 239
Query: 233 E-----------------------------------ASRLLDLMIQIGVRPNAFVYNTLM 257
E A R+ M+Q G + YN ++
Sbjct: 240 EGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIIL 299
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
DG C GRV A F++ME GC TV +YS L++G+C + A+ L+ ML +G +
Sbjct: 300 DGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCE 359
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN-SYIVEAVE 376
P++V YN + L ++ +A+ F+++ + + D +T+ F+ GLC+ + + VE
Sbjct: 360 PNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVE 419
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
LF ++ ++ +Y+ L+DG+
Sbjct: 420 LFESMVSQGTSPNLHSYSILMDGI 443
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 203/390 (52%), Gaps = 19/390 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNS----TGLFPDLYTYNILINCFCKMGRVSH 70
P + L L K+ + +L+K N+ PD+ TY LI+ CK GR+
Sbjct: 145 PDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILE 204
Query: 71 GFVVLG-RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
V + F P+AVT+TS+I GLC R+ E F ++R G EP+ TY LI
Sbjct: 205 ARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALI 264
Query: 130 NGLYRTGHTIVALNLFEEM-ASGNGEFGV-----------EGFVDKAKELFLQMKDENIN 177
+G + A ++ +M SG V G V +A FL M++
Sbjct: 265 DGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCV 324
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
VVTY++++ GFC + + A L M+D+G +PN+V++N+I+ LC+ GK+ +A
Sbjct: 325 ATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFY 384
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLT-GRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+ ++Q + P+ + +N + G C V+ ELF SM S G + + SYSIL++G C
Sbjct: 385 FEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGIC 444
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
+ +E AL ++ EM+S+G+ PDVV++NTL L +V+ A ++F E++R A D W
Sbjct: 445 RAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-APDAW 503
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
+Y + +DGL + + EA L +++ C
Sbjct: 504 SYWSLLDGLSRCERMEEARLLSFHMKLQGC 533
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 152/351 (43%), Gaps = 25/351 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD R P ++ + L K + F + + G PD TY LI+ F
Sbjct: 208 VFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGF 267
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K + V ++L+S + VT+ ++ GLC R+ EA A F + GC V
Sbjct: 268 MKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATV 327
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TY+ L++G F EG V A ELF +M D P++V+
Sbjct: 328 VTYSALMDG-----------------------FCSEGNVSAAVELFRRMLDRGCEPNLVS 364
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN-GKMDEASRLLDLM 241
Y +IRG C A +A +++ + + P+V TFN + LC+ + + L + M
Sbjct: 365 YNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESM 424
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G PN Y+ LMDG C G + A E+F M S G V ++ LI C +
Sbjct: 425 VSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRV 484
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
+ AL ++ E L + PD Y +L L ++E A L M+ G A
Sbjct: 485 DEALEVFRE-LERRSAPDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCA 534
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%)
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
M C+ + +++++ING C+ K ++ A S+ + G +PD V YN L + +V+
Sbjct: 1 MPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDD 60
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
AF+L +M T TY +DGL K + EA+ + + ++ Y +ID
Sbjct: 61 AFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVID 120
Query: 399 GL 400
GL
Sbjct: 121 GL 122
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 204/395 (51%), Gaps = 12/395 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ ++N L + + L +S G+ P L TYN ++ CK+G+ VL
Sbjct: 292 IVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLI 351
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+L+ TPNA T+ +L+ +C I+EA +F ++ G P++ ++++LI L R G
Sbjct: 352 EMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNG 411
Query: 137 HTIVALNLFEEMASGN-------GEFGVEGFV-DKAKELFLQMKDENINP----DVVTYT 184
H AL F EM ++GF + A L+M+DE + DVVTY
Sbjct: 412 HLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYN 471
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+ + G C + +A L EM+++G+ P+ TF ++ CK+G MD+A L + M++
Sbjct: 472 TFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRT 531
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
++P+ YNTL+DGFC G + RAKEL+ M SY ++NG+C + + A
Sbjct: 532 NLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEA 591
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L+L +ML KGI+P++V NTL + +A++ +M +G+ D+++Y T IDG
Sbjct: 592 LNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDG 651
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
K + + +A L + + +I YN +++G
Sbjct: 652 YLKEANLEKAFILINEMEKRGLQFNIITYNLILNG 686
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/365 (32%), Positives = 196/365 (53%), Gaps = 15/365 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IFD M + R P + SF+ L G LA+N H L F+ + +G+ PD Y ILI+ F
Sbjct: 384 IFDEM-SRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGF 442
Query: 63 CKMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
C+ G +S + +L R CF + VT+ + + GLC + +A LF ++ G P+
Sbjct: 443 CRNGALSDALKMRDEMLARGCFM-DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPD 501
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFL 169
+T+ TLI G + G+ ALNLFE M N + F G + +AKEL+
Sbjct: 502 FYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWD 561
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
M ++I PD ++Y +V+ GFC + EA L +M+++G++PN+VT N ++ C++G
Sbjct: 562 DMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSG 621
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
M +A L MI G+ P++F YNTL+DG+ + +A L ME G + +Y+
Sbjct: 622 DMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYN 681
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
+++NG+C +++ A + +M+ GI PD Y++L ++ AF+ DEM +
Sbjct: 682 LILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQR 741
Query: 350 GVAAD 354
G+ D
Sbjct: 742 GLVPD 746
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 170/358 (47%), Gaps = 14/358 (3%)
Query: 55 YNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLR 114
Y++L+ + + ++ G + R + + L+ GL + A ++ ++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249
Query: 115 VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG-------------VEGFV 161
G E NV+T N ++N L + + +M G G F EG V
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDM-EGKGVFADIVTYNTLINAYCREGLV 308
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
++A +L + P ++TY +++ G C ++ AK +LIEM+ G+ PN T+N +
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
+ E+C+ + EA + D M + GV P+ +++L+ G + +A F ME G
Sbjct: 369 LVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGI 428
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
Y+ILI+G+C+N + AL + EML++G DVV YNT L + A
Sbjct: 429 VPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADM 488
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
LF+EM G+ D +T+ T I G CK+ + +A+ LF + + D YN LIDG
Sbjct: 489 LFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDG 546
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 162/344 (47%), Gaps = 27/344 (7%)
Query: 61 CFCKMGRVS--HGFVVLGRILRSCFTPNAV--TFTSLIKGLCAESRIMEAAALFTKLRVF 116
C +M R S V+ ++ +CF +V + L++ ++ E + F LR
Sbjct: 157 CILRMVRKSGVSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRK 216
Query: 117 GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI 176
G ++ N L+ GL RTG +VD A E++ ++ I
Sbjct: 217 GVSVSINACNKLLGGLVRTG-----------------------WVDLAWEIYGEVVRGGI 253
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
+V T ++ C + L +M +GV ++VT+N +++ C+ G ++EA +
Sbjct: 254 ELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQ 313
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
LL+ G+ P YN ++ G C G+ +RAK++ + M +G T +Y+ L+ C
Sbjct: 314 LLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEIC 373
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
+ I A ++ EM +G+ PD+V +++L VL + +A F EM+R G+ D
Sbjct: 374 RRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNV 433
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Y IDG C+N + +A+++ + C +D+ YN ++GL
Sbjct: 434 IYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGL 477
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 212/410 (51%), Gaps = 14/410 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINC 61
+ D M N VC +L GC + ++ + ++++L G P+L TY ++++
Sbjct: 215 LLDEMPNYGVQADAVCYNALLSGCF-RTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDG 273
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK+GR V R++ + + VT+ LI GLC + AA +++ + G +
Sbjct: 274 LCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLD 333
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMA-SGNGEFGV----------EGFVDKAKELFLQ 170
V YN+LI G G T A ++ SG + G V +A EL Q
Sbjct: 334 VSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQ 393
Query: 171 MK-DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
++ D + +PD VT+ ++I G C N A +L + + G + +V +++ +++ CK+G
Sbjct: 394 LENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDG 453
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+ +A+ + M++ G +PN+ VYN L++GFC ++N A ++++ M S GC T+ +Y+
Sbjct: 454 RTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYN 513
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
LI+G CK ++ + A SL EML +G KPD+ Y +L L +V+ A +++DE+
Sbjct: 514 TLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDA 573
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G+ D + I GLC + EA ++ ++ C ++ YN L+DG
Sbjct: 574 GLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDG 623
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 179/381 (46%), Gaps = 30/381 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV--------SH 70
++ IL L ++ D+ ++ + GL D+ YN LI FC++GR S
Sbjct: 301 TYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDST 360
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLR-VFGCEPNVFTYNTLI 129
GF + +I T+ + KGL + EA L +L C P+ T+ TLI
Sbjct: 361 GFSGIRQI---------TTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLI 411
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENIN 177
+GL G+ A + E+ + E V +G A E++ M +
Sbjct: 412 HGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCK 471
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P+ Y ++I GFC + N+A + IEM G P ++T+N ++D LCK K EAS L
Sbjct: 472 PNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSL 531
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
M++ G +P+ Y +L+ G C +V+ A ++ + G V ++ILI+G C
Sbjct: 532 TKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCS 591
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+++ A +Y EM K P++V YNTL +EI +++A L+ + +G+ D T
Sbjct: 592 AGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVT 651
Query: 358 YRTFIDGLCKNSYIVEAVELF 378
Y T I GLC + E V L
Sbjct: 652 YNTRIKGLCSCNRTPEGVLLL 672
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 184/391 (47%), Gaps = 30/391 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLF-----PDLYTYNILINCFCKMGRVS 69
P V S N L + + Y + F L S G F P+L TYNI++ C G V
Sbjct: 117 PGVRSHNTLLDAFVRARRYSDADAFFASL-SHGAFGRRIAPNLQTYNIILRSLCARGDVD 175
Query: 70 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
+ + R P+ VT+++L+ GL ++ A L ++ +G + + YN L+
Sbjct: 176 RAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALL 235
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRG 189
+G +RTG A+ ++E++ ++D +P++ TY ++ G
Sbjct: 236 SGCFRTGMFEKAMKVWEQL----------------------VRDPGASPNLATYKVMLDG 273
Query: 190 FCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
C + EA + MM Q + VT+ +++ LC++G +D A+R+ M++ G+ +
Sbjct: 274 LCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLD 333
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
VYN+L+ GFC GR A + + S G + +Y+I+ G + + A L
Sbjct: 334 VSVYNSLIKGFCEVGRTGEAWKFWDSTGFSG-IRQITTYNIMTKGLLDSGMVSEATELLK 392
Query: 310 EMLSKG-IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
++ + PD V + TL L E RAF++ ++ + G D ++Y + I+ CK+
Sbjct: 393 QLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKD 452
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+A E+++ + C+ + YN LI+G
Sbjct: 453 GRTHDANEVYKNMVKDGCKPNSHVYNALING 483
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 171/352 (48%), Gaps = 24/352 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINCFCKMGRVSHGFVVL 75
+ ++NI+ L + L K+L N PD T+ LI+ C+ G + F +L
Sbjct: 368 ITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEIL 427
Query: 76 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRT 135
S + +++S+I C + R +A ++ + GC+PN YN LING R
Sbjct: 428 EDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRV 487
Query: 136 GHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
++ A +++++M P ++TY ++I G C A
Sbjct: 488 SK-----------------------INDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEK 524
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
+ EA L EM+++G +P++ T+ ++ LC++ K+D A R+ D ++ G++ + V+N
Sbjct: 525 YQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNI 584
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L+ G C G+V+ A +++ M+ C+ + +Y+ L++G+ + I+ A SL+ +L G
Sbjct: 585 LIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNG 644
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
+KPD+V YNT L ++ L +E+ G+ T+ + + K
Sbjct: 645 LKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIK 696
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 148/300 (49%), Gaps = 12/300 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F L L +N + + + + ++G D+++Y+ +IN FCK GR V
Sbjct: 402 PDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEV 461
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ PN+ + +LI G C S+I +A ++ ++ GC P + TYNTLI+GL +
Sbjct: 462 YKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCK 521
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
A +L +EM + + + VD A ++ ++ D + DV+
Sbjct: 522 AEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMV 581
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ +I G C A +EA C+ +EM ++ PN+VT+N +MD + G +D+A+ L ++
Sbjct: 582 HNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAIL 641
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G++P+ YNT + G C R L + + G TV ++SIL+ K I+
Sbjct: 642 DNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQ 701
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 143/345 (41%), Gaps = 61/345 (17%)
Query: 97 LCAESRIMEAAALFTKLR----VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN 152
L A SR + A R + GC P V ++NTL++ R A F ++ +
Sbjct: 90 LSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLS--H 147
Query: 153 GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
G FG I P++ TY ++R C D + A L + +GV
Sbjct: 148 GAFG-----------------RRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVA 190
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL---------------- 256
P+ VT++ +M L K+ ++D A LLD M GV+ +A YN L
Sbjct: 191 PDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKV 250
Query: 257 --------------------MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+DG C GR A E++ M + +Y ILI+G C
Sbjct: 251 WEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLC 310
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
++ +++ A +Y +M+ G+ DV +YN+L E+ + A+K +D G+ T
Sbjct: 311 RSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQIT- 369
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLR-ILKCELDIRAYNCLIDGL 400
TY GL + + EA EL + L C D + LI GL
Sbjct: 370 TYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGL 414
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 136/469 (28%), Positives = 211/469 (44%), Gaps = 83/469 (17%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+N L +K D LF ++ G+ P++ TY+ LIN CK + V
Sbjct: 222 PDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERV 281
Query: 75 LGRILRSCFTPNAVTFTSLIKG-----------------------------------LCA 99
L +++ + PN +T+ LI G LC
Sbjct: 282 LRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCK 341
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTY---------------------------------- 125
RI EA +F + + G +P+V +Y
Sbjct: 342 HGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHV 401
Query: 126 -NTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMK 172
NTLIN R G +L +FE+M F G +D A E F M
Sbjct: 402 FNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMI 461
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF-NVIMDELCKNGKM 231
D + PD Y+ +I+G C D +AK L+ +M+ +G+ P + F I++ LCK G++
Sbjct: 462 DTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRV 521
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
E ++DL+I G RPN +N+L+DG+CL G + A L SMES+G +++Y+ L
Sbjct: 522 AEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTL 581
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
++GYCK+ I+ AL+L+ +ML K + V YN + LF+ + A ++F EM G+
Sbjct: 582 VDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGM 641
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
A TY T + GLC+N+ EA L L + + DI +N +I +
Sbjct: 642 AVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAM 690
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 188/407 (46%), Gaps = 68/407 (16%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDT-------VLSLFKRLNSTG---LFPDL 52
+FD +L R +P P N L LA+ + LFKR++ P +
Sbjct: 130 LFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPALAVELFKRMDRCACPEAAPTI 189
Query: 53 YTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 112
YTYNILINC+ + R G V GR+LR+
Sbjct: 190 YTYNILINCYRRARRPDLGLPVFGRLLRT------------------------------- 218
Query: 113 LRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMK 172
G P+VF+YN LI+G F EG VDKA +LF +M+
Sbjct: 219 ----GLGPDVFSYNALIDG-----------------------FSKEGEVDKAHDLFYKME 251
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 232
++ I P+VVTY+S+I G C + ++A+ +L +M+ GV+PN +T+N ++ +G
Sbjct: 252 EQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWK 311
Query: 233 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
E+ R+ M + P+ N+ M C GR+ A+++F SM G V SY L+
Sbjct: 312 ESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALL 371
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
+GY I G +L+ M+ +G+ PD ++NTL + ++++ +F++M + GV
Sbjct: 372 HGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVN 431
Query: 353 ADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
D T+ T I C+ + +A+E F + D Y+CLI G
Sbjct: 432 PDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQG 478
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 187/408 (45%), Gaps = 14/408 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IFD M+ P P V S+ L A + +LF + G+ PD + +N LIN +
Sbjct: 351 IFDSMVLKGPKPD-VISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAY 409
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
++G + ++ + + P+ +TF+++I C R+ +A F + G P+
Sbjct: 410 ARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDT 469
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN-------------GEFGVEGFVDKAKELFL 169
Y+ LI G + A L +M S EG V + K++
Sbjct: 470 AVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVD 529
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+ P+++T+ S++ G+C + EA LL M GV+P++ T+N ++D CK+G
Sbjct: 530 LIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHG 589
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
++D+A L M+ V + YN ++ G R AKE+F M G ++ +Y+
Sbjct: 590 RIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYA 649
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
++ G C+N + A L ++ S +K D++ +N + +F++ + + A +LF +
Sbjct: 650 TVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTY 709
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
G+ TYR I L K +A LF ++ C D R N +I
Sbjct: 710 GLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEII 757
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 169/384 (44%), Gaps = 29/384 (7%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPD-LYTYNILINCF 62
F++M++ PP ++ L + L + S G+ P + + +IN
Sbjct: 457 FNHMIDTG-VPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNL 515
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK GRV+ G V+ I+ + PN +TF SL+ G C + EA L + G EP++
Sbjct: 516 CKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDI 575
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+TYNTL++G + G +D A LF M + + V+
Sbjct: 576 YTYNTLVDGYCKHGR-----------------------IDDALTLFRDMLHKRVTLTSVS 612
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++ G A AK + EM++ G+ ++ T+ ++ LC+N DEA+ LL+ +
Sbjct: 613 YNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLF 672
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ V+ + +N ++ GR AKELF ++ + G T+ +Y ++I K + E
Sbjct: 673 SMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFE 732
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A +L+ M PD I N + +L +V +A ++ + G+ + T I
Sbjct: 733 DADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLI 792
Query: 363 DGLCKN----SYIVEAVELFRTLR 382
N YI E +R LR
Sbjct: 793 YLFSVNGKYREYIKLLPEKYRFLR 816
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 38/135 (28%)
Query: 269 AKELFVSMESMGCTH---TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
A ELF M+ C T+++Y+ILIN Y + + + L ++G +L
Sbjct: 170 AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLL------------- 216
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
R G+ D ++Y IDG K + +A +LF +
Sbjct: 217 ----------------------RTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQG 254
Query: 386 CELDIRAYNCLIDGL 400
++ Y+ LI+GL
Sbjct: 255 IMPNVVTYSSLINGL 269
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 204/395 (51%), Gaps = 12/395 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ ++N L + + L +S G+ P L TYN ++ CK+G+ VL
Sbjct: 292 IVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLI 351
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+L+ TPNA T+ +L+ +C I+EA +F ++ G P++ ++++LI L R G
Sbjct: 352 EMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNG 411
Query: 137 HTIVALNLFEEMASGN-------GEFGVEGFV-DKAKELFLQMKDENINP----DVVTYT 184
H AL F EM ++GF + A L+M+DE + DVVTY
Sbjct: 412 HLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYN 471
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+ + G C + +A L EM+++G+ P+ TF ++ CK+G MD+A L + M++
Sbjct: 472 TFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRT 531
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
++P+ YNTL+DGFC G + RAKEL+ M SY ++NG+C + + A
Sbjct: 532 NLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEA 591
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L+L +ML KGI+P++V NTL + +A++ +M +G+ D+++Y T IDG
Sbjct: 592 LNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDG 651
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
K + + +A L + + +I YN +++G
Sbjct: 652 YLKEANLEKAFILINEMEKRGLQFNIITYNLILNG 686
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/365 (32%), Positives = 196/365 (53%), Gaps = 15/365 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IFD M + R P + SF+ L G LA+N H L F+ + +G+ PD Y ILI+ F
Sbjct: 384 IFDEM-SRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGF 442
Query: 63 CKMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
C+ G +S + +L R CF + VT+ + + GLC + +A LF ++ G P+
Sbjct: 443 CRNGALSDALKMRDEMLARGCFM-DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPD 501
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFL 169
+T+ TLI G + G+ ALNLFE M N + F G + +AKEL+
Sbjct: 502 FYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWD 561
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
M ++I PD ++Y +V+ GFC + EA L +M+++G++PN+VT N ++ C++G
Sbjct: 562 DMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSG 621
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
M +A L MI G+ P++F YNTL+DG+ + +A L ME G + +Y+
Sbjct: 622 DMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYN 681
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
+++NG+C +++ A + +M+ GI PD Y++L ++ AF+ DEM +
Sbjct: 682 LILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQR 741
Query: 350 GVAAD 354
G+ D
Sbjct: 742 GLVPD 746
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 170/358 (47%), Gaps = 14/358 (3%)
Query: 55 YNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLR 114
Y++L+ + + ++ G + R + + L+ GL + A ++ ++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249
Query: 115 VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG-------------VEGFV 161
G E NV+T N ++N L + + +M G G F EG V
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDM-EGKGVFADIVTYNTLINAYCREGLV 308
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
++A +L + P ++TY +++ G C ++ AK +LIEM+ G+ PN T+N +
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
+ E+C+ + EA + D M + GV P+ +++L+ G + +A F ME G
Sbjct: 369 LVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGI 428
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
Y+ILI+G+C+N + AL + EML++G DVV YNT L + A
Sbjct: 429 VPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADM 488
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
LF+EM G+ D +T+ T I G CK+ + +A+ LF + + D YN LIDG
Sbjct: 489 LFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDG 546
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 162/344 (47%), Gaps = 27/344 (7%)
Query: 61 CFCKMGRVS--HGFVVLGRILRSCFTPNAV--TFTSLIKGLCAESRIMEAAALFTKLRVF 116
C +M R S V+ ++ +CF +V + L++ ++ E + F LR
Sbjct: 157 CILRMVRKSGVSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRK 216
Query: 117 GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI 176
G ++ N L+ GL RTG +VD A E++ ++ I
Sbjct: 217 GVSVSINACNKLLGGLVRTG-----------------------WVDLAWEIYGEVVRGGI 253
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
+V T ++ C + L +M +GV ++VT+N +++ C+ G ++EA +
Sbjct: 254 ELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQ 313
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
LL+ G+ P YN ++ G C G+ +RAK++ + M +G T +Y+ L+ C
Sbjct: 314 LLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEIC 373
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
+ I A ++ EM +G+ PD+V +++L VL + +A F EM+R G+ D
Sbjct: 374 RRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNV 433
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Y IDG C+N + +A+++ + C +D+ YN ++GL
Sbjct: 434 IYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGL 477
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 123/395 (31%), Positives = 194/395 (49%), Gaps = 12/395 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V + NI+ L KN+ + S + G+FPD+ TYN LIN +C+ G + F ++
Sbjct: 97 VYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMD 156
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ P T+ ++I GLC + + A + ++ G P+ TYN L+ R
Sbjct: 157 SMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRND 216
Query: 137 HTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
+ + A +F+EM S G G +D+A + F MK+ + PD V YT
Sbjct: 217 NMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYT 276
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+I GFC +EA + EM++QG +VVT+N I++ LCK + EA L M +
Sbjct: 277 ILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTER 336
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
GV P+ + + TL++G+ G +N+A LF M V +Y+ LI+G+CK E+E
Sbjct: 337 GVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKV 396
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L+ +M+S+ I P+ + Y L + V AF+L+DEM G A T T + G
Sbjct: 397 NELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 456
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
C+ V+A E + + D YN LI+G
Sbjct: 457 YCRAGNAVKADEFLSNMLLKGIVPDGITYNTLING 491
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/375 (30%), Positives = 185/375 (49%), Gaps = 30/375 (8%)
Query: 3 IFDYMLNMRPSP---PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILI 59
IFD M PS P + SF+ L G L+KN D L F+ + + GL PD Y ILI
Sbjct: 224 IFDEM----PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILI 279
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 119
FC+ G +S V +L + VT+ +++ GLC E + EA LFT++ G
Sbjct: 280 GGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF 339
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPD 179
P+ +T+ TLING + G+ ++KA LF M N+ PD
Sbjct: 340 PDFYTFTTLINGYSKDGN-----------------------MNKAVTLFEMMIQRNLKPD 376
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
VVTY ++I GFC ++ + L +M+ + + PN +++ ++++ C G + EA RL D
Sbjct: 377 VVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWD 436
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M++ G NT++ G+C G +A E +M G +Y+ LING+ K +
Sbjct: 437 EMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEE 496
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++ A +L +M + G+ PDV+ YN + +++ A + +M GV D TY
Sbjct: 497 NMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYT 556
Query: 360 TFIDGLCKNSYIVEA 374
+ I+G + + EA
Sbjct: 557 SLINGHVTQNNLKEA 571
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 187/397 (47%), Gaps = 24/397 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D ML + SP ++NIL +N + +F + S G+ PDL +++ LI
Sbjct: 189 VLDEMLKIGMSPD-TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLL 247
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K G + + + P+ V +T LI G C + EA + ++ GC +V
Sbjct: 248 SKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDV 307
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TYNT++NGL + E + +A ELF +M + + PD T
Sbjct: 308 VTYNTILNGLCK-----------------------EKMLSEADELFTEMTERGVFPDFYT 344
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+T++I G+ + N+A L M+ + ++P+VVT+N ++D CK +M++ + L + MI
Sbjct: 345 FTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMI 404
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ PN Y L++G+C G V+ A L+ M G T+ + + ++ GYC+
Sbjct: 405 SRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAV 464
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A ML KGI PD + YNTL + ++RAF L ++M+ G+ D TY +
Sbjct: 465 KADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVIL 524
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+G + + EA + + D Y LI+G
Sbjct: 525 NGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLING 561
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 111/360 (30%), Positives = 174/360 (48%), Gaps = 23/360 (6%)
Query: 40 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
F+ L S GL + N L+ K+G V + + ++RS N T +I LC
Sbjct: 50 FRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCK 109
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEG 159
+I + + + G P+V TYNTLIN R +G
Sbjct: 110 NQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCR-----------------------QG 146
Query: 160 FVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 219
+++A EL M + + P V TY ++I G C + AK +L EM+ G+ P+ T+N
Sbjct: 147 LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN 206
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
+++ E C+N M +A R+ D M GV P+ ++ L+ G +++A + F M++
Sbjct: 207 ILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA 266
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G Y+ILI G+C+N + AL + EML +G DVV YNT+ L + + A
Sbjct: 267 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEA 326
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+LF EM GV D +T+ T I+G K+ + +AV LF + + D+ YN LIDG
Sbjct: 327 DELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDG 386
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 157/315 (49%), Gaps = 23/315 (7%)
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
N + F L++ ++ E F L+ G ++ N+L+ GL + G
Sbjct: 26 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVG--------- 76
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
+VD A E++ ++ + +V T +I C K L +
Sbjct: 77 --------------WVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSD 122
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M ++GV P+VVT+N +++ C+ G ++EA L+D M G++P F YN +++G C TG+
Sbjct: 123 MEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGK 182
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
RAK + M +G + +Y+IL+ C+N + A ++ EM S+G+ PD+V ++
Sbjct: 183 YLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 242
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L +L + +++A K F +M+ G+A D Y I G C+N + EA+++ +
Sbjct: 243 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 302
Query: 386 CELDIRAYNCLIDGL 400
C LD+ YN +++GL
Sbjct: 303 CVLDVVTYNTILNGL 317
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 104/223 (46%)
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
N + + + ++R + A E + +G+ ++ N ++ L K G +D A
Sbjct: 22 NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 81
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+ +++ GV+ N + N +++ C ++ K ME G V +Y+ LIN
Sbjct: 82 WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 141
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
YC+ +E A L M KG+KP V YN + L + + RA + DEM + G++ D
Sbjct: 142 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 201
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
T TY + C+N +++A +F + D+ +++ LI
Sbjct: 202 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI 244
>gi|357500143|ref|XP_003620360.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495375|gb|AES76578.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 426
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 116/354 (32%), Positives = 197/354 (55%), Gaps = 2/354 (0%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G+ D+ +ILIN F + ++++ F VL +IL+ + P+ VT T+L+KGLC + + +A
Sbjct: 5 GIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKKA 64
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKE 166
+ G + +Y TLINGL ++G T M + V A +
Sbjct: 65 LHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAPDQFMYSMIIN--RLCKDKLVVDAYD 122
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
L+ +M + I PDVVTY ++I GFC +A L EM + + PNV +FN+++D LC
Sbjct: 123 LYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLC 182
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
K G + +L +MI+ V+P+ ++L+DG+ L + N+A+ +F +M G T +
Sbjct: 183 KEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLR 242
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
SY+I+ING K K ++ A+ L+ EM K + PD + Y+TL L ++ ++ + L DEM
Sbjct: 243 SYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEM 302
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ G +A+ TY + ++ LCK+ + A+ +F ++ E ++ YN L+DGL
Sbjct: 303 RATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGL 356
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 165/351 (47%), Gaps = 58/351 (16%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
PD + Y+++IN CK V + + ++ P+ VT+ +LI G C ++ +A L
Sbjct: 99 PDQFMYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRL 158
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL 169
F ++R+ PNV ++N LI+GL + EG V K +
Sbjct: 159 FNEMRLKNIVPNVCSFNILIDGLCK-----------------------EGDVKGGKSVLA 195
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
M +++ PDVVT +S+I G+ N+A+ + M GV ++ ++N++++ L K
Sbjct: 196 VMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAK 255
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+DEA L M + P+ Y+TL+DG GR++ +L M + G + V +YS
Sbjct: 256 MVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYS 315
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
L+N CK+ + A+ ++ ++ KG +P++V YN L
Sbjct: 316 SLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNIL----------------------- 352
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+DGLCKN + +A E+F L I LD+R Y +I+GL
Sbjct: 353 ------------VDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGL 391
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 149/302 (49%), Gaps = 29/302 (9%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L + + LF + + P++ ++NILI+ CK G V G V
Sbjct: 134 PDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSV 193
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ P+ VT +SLI G + +A +F + G ++ +YN +INGL +
Sbjct: 194 LAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSK 253
Query: 135 TGHTIVALNLFEEMA---------------SGNGEFGVEGFVDKAKELFLQMKDENINPD 179
A+ LF+EM G G+ G +V +L +M+ + +
Sbjct: 254 AKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYV---WDLIDEMRATGRSAN 310
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL- 238
V+TY+S++ C + ++ A + ++ D+G +PN+VT+N+++D LCKNG++ +A +
Sbjct: 311 VITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFH 370
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
DL+I+ G R + +Y +++G C + E+ GCT +Y I+I KN
Sbjct: 371 DLLIK-GYRLDVRLYTVMINGLCREALFD---------EAYGCTPNAVTYEIIIRALFKN 420
Query: 299 KE 300
+
Sbjct: 421 DK 422
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 110/229 (48%), Gaps = 14/229 (6%)
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M+ I D++ + +I F + N A +L +++ G QP+ VT ++ LC N +
Sbjct: 1 MELRGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNE 60
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ +A D +I G R + Y TL++G C +G + F YS+
Sbjct: 61 VKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAPDQ--------------FMYSM 106
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+IN CK+K + A LY EM+ K I PDVV YNTL + Q+E A +LF+EM+
Sbjct: 107 IINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKN 166
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + ++ IDGLCK + + + + D+ + LIDG
Sbjct: 167 IVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDG 215
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 78/193 (40%), Gaps = 33/193 (17%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ + P +++ L L K V L + +TG ++ TY+ L+N CK G
Sbjct: 267 MQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGH 326
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ +I F PN VT+ L+ GLC R+ +A +F L + G +V Y
Sbjct: 327 FDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTV 386
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
+INGL R LF+E +G P+ VTY +I
Sbjct: 387 MINGLCREA-------LFDE------AYGC-------------------TPNAVTYEIII 414
Query: 188 RGFCYANDWNEAK 200
R + ND N+ +
Sbjct: 415 RAL-FKNDKNKLQ 426
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%)
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+GI+ D++ + L + + Q+ AF + ++ + G DT T T + GLC N+ + +
Sbjct: 4 RGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKK 63
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A+ + LD +Y LI+GL
Sbjct: 64 ALHFHDDVIAKGFRLDNVSYGTLINGL 90
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 119/398 (29%), Positives = 198/398 (49%), Gaps = 16/398 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGR 77
++N++ L K + + K + + + PDL TY+ +IN FCK G + +L
Sbjct: 43 TYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILRE 102
Query: 78 IL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ R P+ VT+TS++ GLC + ++ A + ++++ G EP+ FT++ LI G
Sbjct: 103 MVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNAR 162
Query: 137 HTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDVVTY 183
AL L++E+ + + F G ++KA ++ M+ P+VVTY
Sbjct: 163 KVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTY 222
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
+S++ G C A D ++A L M +G PNVVT+ ++ LC K+D A L+D M
Sbjct: 223 SSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTA 282
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
P+ YN L+DG+C GR+ AK+LF M + C +Y+ L+ G+C +E
Sbjct: 283 TCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEE 342
Query: 304 ALSLYGEM-LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L M + GI PDVV Y+ + + A + EM VA + TY + I
Sbjct: 343 ARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLI 402
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
DGLCK + A+E+ + + + E + +N +I L
Sbjct: 403 DGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGAL 440
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 175/331 (52%), Gaps = 18/331 (5%)
Query: 85 PNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNL 144
P VT+T +I G C +++ +A A F K+R F PN TYN ++NGL + T A +
Sbjct: 5 PTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYEV 63
Query: 145 FEEMASG--------------NGEFGVEGFVDKAKELFLQM-KDENINPDVVTYTSVIRG 189
+EM G NG F +G +D+A E+ +M + I PDVVTYTSV+ G
Sbjct: 64 LKEMRDGKSVAPDLVTYSTVING-FCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122
Query: 190 FCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DLMIQIGVRP 248
C + A ++ EM +GV+P+ TF+ ++ C K+DEA +L +++ +P
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
+ Y L+DGFC +G + +A ++ ME C V +YS L++G CK +++ AL L+
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
M SKG P+VV Y TL L H+V+ A L DEM DT +Y +DG C+
Sbjct: 243 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRL 302
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I EA +LF+ + C D Y CL+ G
Sbjct: 303 GRIEEAKQLFKEMATKSCLPDRITYTCLVRG 333
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 208/415 (50%), Gaps = 23/415 (5%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKR-LNSTGLFPDLYTYNILINCFCKMG 66
+ ++ P +F+ L + D L L+K L S+ PD+ TY LI+ FCK G
Sbjct: 139 MKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSG 198
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ +LG + PN VT++SL+ GLC + +A LF ++ GC PNV TY
Sbjct: 199 NLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYT 258
Query: 127 TLINGLYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKD 173
TLI+GL A L +EM + +G + G +++AK+LF +M
Sbjct: 259 TLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDG-YCRLGRIEEAKQLFKEMAT 317
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMD 232
++ PD +TYT ++RGFC A+ EA+ LL M G+ P+VVT+++++ + +
Sbjct: 318 KSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFV 377
Query: 233 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
EA+ + MI V PNA Y++L+DG C GRV+ A E+ +M + +V +++ +I
Sbjct: 378 EAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVI 437
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
C+ +++ A L M + G++P +V Y TL ++E A++LF+ M++
Sbjct: 438 GALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKK 497
Query: 353 -------ADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ I GLCK I +A+ + LR +CE ++DGL
Sbjct: 498 SSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGL 552
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 173/361 (47%), Gaps = 20/361 (5%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V +++ L L K D L LF+R+ S G P++ TY LI+ C +V
Sbjct: 213 RKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDA 272
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+++ + +C P+ V++ +L+ G C RI EA LF ++ C P+ TY L+
Sbjct: 273 ARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVR 332
Query: 131 GLYRTGHTIVALNLFEEMASGNG--------EFGVEGFVD-----KAKELFLQMKDENIN 177
G A L E M + G V G+ +A E +M N+
Sbjct: 333 GFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVA 392
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P+ VTY+S+I G C A + A +L M+++ V+P+V TFN ++ LC+ G MDEA +L
Sbjct: 393 PNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKL 452
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF-------SYSI 290
L M G+ P Y TL++GF TGR+ A ELF M + ++S
Sbjct: 453 LVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSA 512
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI G CK +EI+ A+++ E+ S+ +P + L + E A KL + + + G
Sbjct: 513 LIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVG 572
Query: 351 V 351
+
Sbjct: 573 L 573
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 192/400 (48%), Gaps = 22/400 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
++ +L P V ++ L K+ + + + + + P++ TY+ L++
Sbjct: 170 LYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGL 229
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G + + R+ PN VT+T+LI GLCA ++ A L ++ C P+
Sbjct: 230 CKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDT 289
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG-------VEGF-----VDKAKELFLQ 170
+YN L++G R G A LF+EMA+ + V GF +++A+ L
Sbjct: 290 VSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLEN 349
Query: 171 MKDE-NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
MK I+PDVVTY+ V+ G+ A + EA + EM+ + V PN VT++ ++D LCK G
Sbjct: 350 MKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAG 409
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
++D A +L M+ V P+ +N+++ C G ++ A +L V+M + G + +Y+
Sbjct: 410 RVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYT 469
Query: 290 ILINGYCKNKEIEGALSLYGEM--------LSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
L+ G+ + +E A L+ M + + P+ ++ L L + ++++A
Sbjct: 470 TLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQA-FSALIRGLCKAREIDKAMA 528
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+ +E++ +DGL + EA +L ++
Sbjct: 529 VVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSI 568
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 103/191 (53%), Gaps = 4/191 (2%)
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
QP VVT+ +I+D CK ++ +A + M + V PN YN +++G C ++A E
Sbjct: 4 QPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYE 62
Query: 272 LFVSM-ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK-GIKPDVVIYNTLFVV 329
+ M + + +YS +ING+CK E++ A + EM+++ GI PDVV Y ++
Sbjct: 63 VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT-LRILKCEL 388
L +++RA ++ EM+ GV D +T+ I G C + EA++L++ L +
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182
Query: 389 DIRAYNCLIDG 399
D+ Y LIDG
Sbjct: 183 DVVTYTALIDG 193
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 36/157 (22%)
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS------------------------- 313
M C TV +++I+I+G+CK +++ AL+ + +M
Sbjct: 1 MECQPTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKA 60
Query: 314 ----------KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM-QRDGVAADTWTYRTFI 362
K + PD+V Y+T+ + +++RA ++ EM RDG+A D TY + +
Sbjct: 61 YEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVV 120
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
DGLC++ + A E+ R +++ E D ++ LI G
Sbjct: 121 DGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITG 157
>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
Length = 506
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 130/420 (30%), Positives = 207/420 (49%), Gaps = 28/420 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG---LFPDLYTYNILI 59
+FD +L R P+ S N +A++ V S F R+ G + P ++TY ILI
Sbjct: 40 VFDELLR-RGIGAPIRSLNGALADVARDNPAAAV-SRFNRMARAGASMVTPTVHTYGILI 97
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK-LRVFGC 118
C C GR+ GF LG +++ F + F L+KGLCA+ R +A + + + GC
Sbjct: 98 GCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGMTELGC 157
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG---------EFGVEGFV-----DKA 164
PNVF++ ++ GL + AL L MA G +G + DKA
Sbjct: 158 VPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTDGLLKGGDPDKA 217
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
+ +M D I P+VVTY+S+I C ++A + M+ GV PN T+ ++
Sbjct: 218 YATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHG 277
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
C +G++ EA + L+ M GV PN Y++ MD C GR A+++F SM G
Sbjct: 278 FCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPD 337
Query: 285 VFSYSILINGYCKNKEIEGAL----SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
+ +YS L++GY IEGAL L+ M+ ++PD ++NTL + +V+ A
Sbjct: 338 ITTYSSLLHGYA----IEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAM 393
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+F +M+ G+ + TY T I+G CK + + A+ LF+ + + YN ++ GL
Sbjct: 394 LVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGL 453
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 1/171 (0%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
Y + R P + +++ L A + LF + + + PD Y +N LI K
Sbjct: 327 YSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQ 386
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
G+V +V ++ PN VT+ +LI G C +R+ A ALF ++ G PN TY
Sbjct: 387 GKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSPNFITY 446
Query: 126 NTLINGLYRTGHTIVALNLFEEM-ASGNGEFGVEGFVDKAKELFLQMKDEN 175
N ++ GL+RTG T A + ++ SG + +G +++ +LFL M+D +
Sbjct: 447 NIMLQGLFRTGRTGTAKEFYVQIIKSGKKDLIEQGLLEELDDLFLSMEDND 497
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 130/399 (32%), Positives = 200/399 (50%), Gaps = 16/399 (4%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + N + LA+++ V LF++L + P+++T+NI+I+ CK G ++
Sbjct: 154 PPNTRTCNHILLRLARDRSGRLVRRLFEQLPA----PNVFTFNIVIDFLCKEGELAEARS 209
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ R+ P+ VTF SLI G + E L ++R GC+ +V TYN LIN
Sbjct: 210 LFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFC 269
Query: 134 RTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
+ G A F M F EG V +A +LF QM+ + +
Sbjct: 270 KFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEF 329
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT +I G C A ++A LL EM+ QGV NVVT+ V++D LCK K+ EA +L +M
Sbjct: 330 TYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMM 389
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ GVR N +Y TL+ G + +A L M++ G + Y LI G C ++
Sbjct: 390 EKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKL 449
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A SL +M G++P+ +IY T+ F+ +V A + ++ G + TY
Sbjct: 450 DEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCAL 509
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
IDGLCK I EA+ F +R L + +++AY L+DGL
Sbjct: 510 IDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGL 548
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 194/430 (45%), Gaps = 47/430 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FN L K D V L + + +G D+ TYN LINCFCK GR+ +
Sbjct: 221 PDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGY 280
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R N VTF++ + C E + EA LF ++RV G N FTY LI+G +
Sbjct: 281 FAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCK 340
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFV--------------------------------- 161
G A+ L +EM V +
Sbjct: 341 AGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELL 400
Query: 162 --------------DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
+KA L +MK++ + D+ Y ++I+G C + +EAK LL +M
Sbjct: 401 YTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMD 460
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+ G++PN + + +MD K+GK+ EA +L ++ G +PN Y L+DG C G ++
Sbjct: 461 ESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSID 520
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A F M +G V +Y+ L++G CKN + A+ L+ EM+ KG+ D V+Y L
Sbjct: 521 EAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALL 580
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
+ + AF L +M G+ D + Y FI G C + + EA E+F +
Sbjct: 581 DGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIA 640
Query: 388 LDIRAYNCLI 397
D YNCLI
Sbjct: 641 PDRAVYNCLI 650
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 169/379 (44%), Gaps = 47/379 (12%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +F+ K + LF ++ G+ + +TY LI+ CK GR+ V+L
Sbjct: 293 VVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLD 352
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++R N VT+T L+ GLC E ++ EA + + G N Y TLI+G +
Sbjct: 353 EMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNK 412
Query: 137 HTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMK------------ 172
++ AL L EM + E + + +D+AK L +M
Sbjct: 413 NSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYT 472
Query: 173 -----------------------DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
D P+V+TY ++I G C A +EA +M D
Sbjct: 473 TMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDL 532
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
G+ PNV + ++D LCKNG ++EA +L + M+ G+ + VY L+DG+ G ++ A
Sbjct: 533 GLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDA 592
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
L M G +F Y+ I+G+C + A ++ EM+ GI PD +YN L
Sbjct: 593 FALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISK 652
Query: 330 LFEIHQVERAFKLFDEMQR 348
++ +E A L DEM+R
Sbjct: 653 YQKLGNLEEAISLQDEMER 671
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 157/322 (48%), Gaps = 8/322 (2%)
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
A +L+ L + +A ++R PN T N ++ L R + LFE
Sbjct: 122 ASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFE 181
Query: 147 EMASGNG-EFGV-------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
++ + N F + EG + +A+ LF +MK+ PDVVT+ S+I G+ + +E
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
+ L+ EM G + +VVT+N +++ CK G+M+ A M + GV N ++T +D
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
FC G V A +LF M G F+Y+ LI+G CK ++ A+ L EM+ +G+
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
+VV Y L L + +V A + M++ GV A+ Y T I G N +A+ L
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
++ ELDI Y LI GL
Sbjct: 422 SEMKNKGLELDISLYGALIQGL 443
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 122/253 (48%), Gaps = 18/253 (7%)
Query: 23 LFGCLAK---NKH-YDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
L+G L + N H D SL +++ +GL P+ Y +++ K G+V +L +I
Sbjct: 435 LYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKI 494
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
L S F PN +T+ +LI GLC I EA + F K+R G +PNV Y L++GL + G
Sbjct: 495 LDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCL 554
Query: 139 IVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSV 186
A+ LF EM +G + A L +M D + D+ YT
Sbjct: 555 NEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCF 614
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I GFC N EA+ + EM+ G+ P+ +N ++ + K G ++EA L D M + V
Sbjct: 615 ISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMER--V 672
Query: 247 RPNAFVYNTLMDG 259
P+ +T DG
Sbjct: 673 LPSCTDSDTATDG 685
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L L KN + + LF + G+ D Y L++ + K G + F +
Sbjct: 536 PNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFAL 595
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ S + +T I G C + + EA +F+++ G P+ YN LI+ +
Sbjct: 596 KAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQK 655
Query: 135 TGHTIVALNLFEEM 148
G+ A++L +EM
Sbjct: 656 LGNLEEAISLQDEM 669
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 203 bits (517), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 194/430 (45%), Gaps = 47/430 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FN L K D V L + + +G D+ TYN LINCFCK GR+ +
Sbjct: 221 PDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGY 280
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R N VTF++ + C E + EA LF ++RV G N FTY LI+G +
Sbjct: 281 FAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCK 340
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFV--------------------------------- 161
G A+ L +EM V +
Sbjct: 341 AGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELL 400
Query: 162 --------------DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
+KA L +MK++ + D+ Y ++I+G C + +EAK LL +M
Sbjct: 401 YTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMD 460
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+ G++PN + + +MD K+GK+ EA +L ++ G +PN Y L+DG C G ++
Sbjct: 461 ESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSID 520
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A F M +G V +Y+ L++G CKN + A+ L+ EM+ KG+ D V+Y L
Sbjct: 521 EAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALL 580
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
+ + AF L +M G+ D + Y FI G C + + EA E+F +
Sbjct: 581 DGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIA 640
Query: 388 LDIRAYNCLI 397
D YNCLI
Sbjct: 641 PDRAVYNCLI 650
Score = 203 bits (517), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 130/399 (32%), Positives = 200/399 (50%), Gaps = 16/399 (4%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + N + LA+++ V LF++L + P+++T+NI+I+ CK G ++
Sbjct: 154 PPNTRTCNHILLRLARDRSGRLVRRLFEQLPA----PNVFTFNIVIDFLCKEGELAEARS 209
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ R+ P+ VTF SLI G + E L ++R GC+ +V TYN LIN
Sbjct: 210 LFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFC 269
Query: 134 RTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
+ G A F M F EG V +A +LF QM+ + +
Sbjct: 270 KFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEF 329
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT +I G C A ++A LL EM+ QGV NVVT+ V++D LCK K+ EA +L +M
Sbjct: 330 TYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMM 389
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ GVR N +Y TL+ G + +A L M++ G + Y LI G C ++
Sbjct: 390 EKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKL 449
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A SL +M G++P+ +IY T+ F+ +V A + ++ G + TY
Sbjct: 450 DEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCAL 509
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
IDGLCK I EA+ F +R L + +++AY L+DGL
Sbjct: 510 IDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGL 548
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 169/379 (44%), Gaps = 47/379 (12%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +F+ K + LF ++ G+ + +TY LI+ CK GR+ V+L
Sbjct: 293 VVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLD 352
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++R N VT+T L+ GLC E ++ EA + + G N Y TLI+G +
Sbjct: 353 EMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNK 412
Query: 137 HTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMK------------ 172
++ AL L EM + E + + +D+AK L +M
Sbjct: 413 NSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYT 472
Query: 173 -----------------------DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
D P+V+TY ++I G C A +EA +M D
Sbjct: 473 TMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDL 532
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
G+ PNV + ++D LCKNG ++EA +L + M+ G+ + VY L+DG+ G ++ A
Sbjct: 533 GLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDA 592
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
L M G +F Y+ I+G+C + A ++ EM+ GI PD +YN L
Sbjct: 593 FALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISK 652
Query: 330 LFEIHQVERAFKLFDEMQR 348
++ +E A L DEM+R
Sbjct: 653 YQKLGNLEEAISLQDEMER 671
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 157/322 (48%), Gaps = 8/322 (2%)
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
A +L+ L + +A ++R PN T N ++ L R + LFE
Sbjct: 122 ASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFE 181
Query: 147 EMASGNG-EFGV-------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
++ + N F + EG + +A+ LF +MK+ PDVVT+ S+I G+ + +E
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
+ L+ EM G + +VVT+N +++ CK G+M+ A M + GV N ++T +D
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
FC G V A +LF M G F+Y+ LI+G CK ++ A+ L EM+ +G+
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
+VV Y L L + +V A + M++ GV A+ Y T I G N +A+ L
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
++ ELDI Y LI GL
Sbjct: 422 SEMKNKGLELDISLYGALIQGL 443
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 116/238 (48%), Gaps = 16/238 (6%)
Query: 23 LFGCLAK---NKH-YDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
L+G L + N H D SL +++ +GL P+ Y +++ K G+V +L +I
Sbjct: 435 LYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKI 494
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
L S F PN +T+ +LI GLC I EA + F K+R G +PNV Y L++GL + G
Sbjct: 495 LDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCL 554
Query: 139 IVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSV 186
A+ LF EM +G + A L +M D + D+ YT
Sbjct: 555 NEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCF 614
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
I GFC N EA+ + EM+ G+ P+ +N ++ + K G ++EA L D M ++
Sbjct: 615 ISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERV 672
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L L KN + + LF + G+ D Y L++ + K G + F +
Sbjct: 536 PNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFAL 595
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ S + +T I G C + + EA +F+++ G P+ YN LI+ +
Sbjct: 596 KAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQK 655
Query: 135 TGHTIVALNLFEEM 148
G+ A++L +EM
Sbjct: 656 LGNLEEAISLQDEM 669
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 179/385 (46%), Gaps = 29/385 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++NIL ++ D L LFK L+S G P+ TY +I R+
Sbjct: 297 PDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAF 356
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + +++T++IKGL RI EA LF KL+ GC PNV Y +I+GL +
Sbjct: 357 FDEAL------DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLK 410
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G L FE+M+ + P TYT VI G C A
Sbjct: 411 AGRIEDGLKNFEDMSGSS-----------------------CVPTRTTYTVVIDGLCKAQ 447
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+A + +M+ +G P+ +T+ ++D K KMDEA +LLD+M+ G P A Y
Sbjct: 448 MLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYG 507
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+++ GFC +N AKE+ M GC +F ++ L++ Y E A + EM ++
Sbjct: 508 SIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTAR 567
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G PDV++Y +L +LF +V A +FD M G A D TY T I K + A
Sbjct: 568 GCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAA 627
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
E+ + D AYN L+DG
Sbjct: 628 GEILELMAKSGVGPDCFAYNSLMDG 652
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 201/432 (46%), Gaps = 48/432 (11%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V S+ + LA +K D LF++L + G P++ Y +I+ K GR+ G
Sbjct: 363 VISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFE 422
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ S P T+T +I GLC + +A +F ++ GC P+ TY TLI+G +
Sbjct: 423 DMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKAS 482
Query: 137 HTIVALNLFEEMASGNGE-----FG--VEGF-----VDKAKELFLQMKDENINPDVVTYT 184
A L + M + E +G V GF +++AKE+ QM++ P + +T
Sbjct: 483 KMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFT 542
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
S++ + EA +L EM +G P+V+ + ++D L G++ EA + D MI+
Sbjct: 543 SLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEK 602
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G P+A Y T++ F G V A E+ M G F+Y+ L++GY K + ++ A
Sbjct: 603 GCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQA 662
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM-QRDGVAADTWTYRTFID 363
+Y M++ GIKP+ V +N L LF+ + +RAF LF EM ++D V +Y ID
Sbjct: 663 FGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILID 722
Query: 364 GLCKNSYIVEAVELFRTL-----------------------RI------------LKCEL 388
GL K + EA F+ + RI L
Sbjct: 723 GLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNP 782
Query: 389 DIRAYNCLIDGL 400
D++AY+ LI GL
Sbjct: 783 DVQAYSALITGL 794
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 192/399 (48%), Gaps = 21/399 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + NI+ L K + D + LF + S G P + +YN +I+ + ++ +
Sbjct: 18 PDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKF 77
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK-LRVFGCEPNVFTYNTLINGLY 133
++ + P+ + FT+LI G C + L + L+ F P+VF Y ++I+G
Sbjct: 78 FNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF--RPDVFLYTSVIHGYC 135
Query: 134 RTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
+ G + EEM + G VD+A ELF +M+ D V
Sbjct: 136 KAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYV 195
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
T+ ++I +EA L EM+++G +P + + ++ LCK GK+DEA+ + +
Sbjct: 196 TFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTV 255
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ V + YN+LMDG+C GRV+ +L + M + +Y+IL+ G+ + +
Sbjct: 256 VAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRL 315
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ AL L+ + S G KP+ Y T+ L++ ++E A FDE A D +Y T
Sbjct: 316 DDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDE------ALDVISYTTV 369
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I GL + I EA ELF L+ C ++ AY +IDGL
Sbjct: 370 IKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGL 408
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 186/398 (46%), Gaps = 13/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ ++ L K + +F+++ G PD TY LI+ F K ++ +
Sbjct: 431 PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKL 490
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L P AVT+ S++ G C I EA + ++R GCEP +F + +L++
Sbjct: 491 LDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLS 550
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G A + EM + V G V +A+ +F M ++ PD +T
Sbjct: 551 KGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALT 610
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I+ F + A +L M GV P+ +N +MD K ++D+A + D M+
Sbjct: 611 YGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMV 670
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMGCTHTVFSYSILINGYCKNKEI 301
G++PNA +N LM G G+ +RA LF M E T+ SY+ILI+G K +
Sbjct: 671 ASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRV 730
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A S + EM+ +GI P+ Y +L L + ++ A KL ++M + GV D Y
Sbjct: 731 SEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSAL 790
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I GL +S + A ++F+ + C + Y L G
Sbjct: 791 ITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRG 828
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 184/398 (46%), Gaps = 19/398 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S+N + LA D F + G PD+ + LI+ FCK G+ G ++
Sbjct: 53 PTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHML 112
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + L+ F P+ +TS+I G C + + ++ GC P+ Y LI+ L +
Sbjct: 113 LNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCK 171
Query: 135 TGHTIVALNLFEEMASGN--GEF----------GVEGFVDKAKELFLQMKDENINPDVVT 182
G A LFE M G++ G +D+A EL+ +M + P +
Sbjct: 172 LGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEV 231
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
S+I C A +EA + ++ + V + V +N +MD CK G++D+ +LL M+
Sbjct: 232 QDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMV 291
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ P+ YN L+ GF R++ A ELF + S GC +Y+ +I G + +E
Sbjct: 292 ECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRME 351
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A + + E L DV+ Y T+ L + +++ A +LF++++ G + + Y I
Sbjct: 352 EAKAFFDEAL------DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVI 405
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
DGL K I + ++ F + C Y +IDGL
Sbjct: 406 DGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGL 443
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 157/337 (46%), Gaps = 14/337 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D ML P P V +I+ G K + + ++ G P L+ + L++ +
Sbjct: 490 LLDVMLTKGPEPTAVTYGSIVHG-FCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYY 548
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
GR + VL + P+ + +TSLI L + R+ EA +F + GC P+
Sbjct: 549 LSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDA 608
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMA-SGNGE--FG----VEGFV-----DKAKELFLQ 170
TY T+I + G+ A + E MA SG G F ++G+V D+A ++ +
Sbjct: 609 LTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDR 668
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG-VQPNVVTFNVIMDELCKNG 229
M I P+ VT+ ++ G + A L EM+++ V P +V++ +++D L K G
Sbjct: 669 MVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAG 728
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
++ EA MI G+ P Y +L+ GR+ AK+L M +G V +YS
Sbjct: 729 RVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYS 788
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
LI G + ++ A ++ EM+ +G P+ V Y L
Sbjct: 789 ALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 825
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 134/288 (46%), Gaps = 22/288 (7%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P V + L L +F + G PD TY +I F K+G
Sbjct: 564 MTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGN 623
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V +L + +S P+ + SL+ G R+ +A ++ ++ G +PN T+N
Sbjct: 624 VEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNV 683
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
L++GL++ G T A +LF+EM ++ + + P +V+YT +I
Sbjct: 684 LMHGLFKDGKTDRAFSLFKEM----------------------LEKDEVPPTLVSYTILI 721
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
G A +EA EM+D+G+ P T+ ++ L K G++ EA +L++ M+++GV
Sbjct: 722 DGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVN 781
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
P+ Y+ L+ G + V+ A ++F M GC +Y +L G+
Sbjct: 782 PDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGF 829
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 116/221 (52%), Gaps = 1/221 (0%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+++A + +M + PDVV V+ G C A ++A L +EM G +P +V++N
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
++ L KMDEA + + MI G P+ + TL+ GFC G+ + + ++
Sbjct: 61 VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQ-PQVGHMLLNQALKR 119
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
VF Y+ +I+GYCK +++ + EML+ G PD Y L L ++ +V+ A+
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+LF+ M++ G D T+ T I+ L + + EA EL+R +
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREM 220
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 62/139 (44%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F ML PP + S+ IL L K S F+ + G+ P+ +TY LI
Sbjct: 698 FSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIY 757
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
K GR+ ++ +++ P+ +++LI GL S + A +F ++ GC P
Sbjct: 758 SLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAP 817
Query: 121 NVFTYNTLINGLYRTGHTI 139
N TY L G G +
Sbjct: 818 NEVTYKVLRRGFRAAGRAL 836
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%)
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+E AL EM + G+ PDVV N + L + ++++A +LF EM G +Y T
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I GL + EA + F ++ CE D+ A+ LI G
Sbjct: 61 VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHG 99
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
+E A EM G+ D ++GLCK I +A+ELF + + CE I +YN
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60
Query: 396 LIDGL 400
+I GL
Sbjct: 61 VISGL 65
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/406 (32%), Positives = 204/406 (50%), Gaps = 13/406 (3%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
Y + R PP + +F ++ L D+ LS+ + + G P+ Y LI+ K
Sbjct: 200 YDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKC 259
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
RV+ +L + P+A TF +I GLC RI EAA + ++ + G P+ TY
Sbjct: 260 NRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITY 319
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGNG--------EFGVEGFVDKAKELFLQM-KDENI 176
L+NGL + G A +LF + F G +D AK + M I
Sbjct: 320 GYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI 379
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
PDV TY S+I G+ A +L +M ++G +PNV ++ +++D CK GK+DEA
Sbjct: 380 VPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 439
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
LL+ M G++PN +N L+ FC R+ A E+F M GC V++++ LI+G C
Sbjct: 440 LLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC 499
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
+ EI+ AL L +M+S+G+ + V YNTL +++ A KL +EM G D
Sbjct: 500 EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEI 559
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC--LIDGL 400
TY + I GLC+ + +A LF ++L+ L + +C LI+GL
Sbjct: 560 TYNSLIKGLCRAGEVDKARSLFE--KMLRDGLVPSSISCNILINGL 603
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 195/404 (48%), Gaps = 44/404 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS----- 69
P +FN + L K + + R+ G PD TY L+N CK+GRV
Sbjct: 279 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDL 338
Query: 70 ----------------HGFVVLGR------ILRSCFT-----PNAVTFTSLIKGLCAESR 102
HGFV GR +L T P+ T+ SLI G +
Sbjct: 339 FYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGL 398
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF-- 160
+ A + +R GC+PNV++Y L++G + G A NL EM++ + GF
Sbjct: 399 VGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNC 458
Query: 161 ----------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG 210
+ +A E+F +M + PDV T+ S+I G C ++ A LL +M+ +G
Sbjct: 459 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 518
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
V N VT+N +++ + G++ EA +L++ M+ G + YN+L+ G C G V++A+
Sbjct: 519 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKAR 578
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
LF M G + S +ILING C++ +E A+ EM+ +G PD+V +N+L L
Sbjct: 579 SLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 638
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
++E +F ++Q +G+ DT TY T + LCK ++ +A
Sbjct: 639 CRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDA 682
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 177/351 (50%), Gaps = 23/351 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P VC++N L K L + + + + G P++Y+Y IL++ FCK+G++ + +
Sbjct: 381 PDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNL 440
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + PN V F LI C E RI EA +F ++ GC+P+V+T+N+LI+GL
Sbjct: 441 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 500
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
AL L +M S E + + VTY ++I F
Sbjct: 501 VDEIKHALWLLRDMIS-----------------------EGVVANTVTYNTLINAFLRRG 537
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ EA+ L+ EM+ QG + +T+N ++ LC+ G++D+A L + M++ G+ P++ N
Sbjct: 538 EIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCN 597
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L++G C +G V A E M G T + +++ LING C+ IE L+++ ++ ++
Sbjct: 598 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 657
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
GI PD V YNTL L + V A L DE DG + T+ + L
Sbjct: 658 GIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSL 708
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 119/315 (37%), Gaps = 68/315 (21%)
Query: 153 GEFGVEGFVDKAKELFLQMKDENI------------------------------------ 176
G+ G G L +QMKDE I
Sbjct: 113 GKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSC 172
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
P +Y V+ N A + +M+ + + P + TF V+M LC ++D A
Sbjct: 173 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALS 232
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+L M + G PN+ +Y TL+ RVN A +L M MGC +++ +I G C
Sbjct: 233 VLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 292
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF------------- 343
K I A + ML +G PD + Y L L +I +V+ A LF
Sbjct: 293 KFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNT 352
Query: 344 -------------------DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
D + G+ D TY + I G K + A+E+ R +R
Sbjct: 353 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNK 412
Query: 385 KCELDIRAYNCLIDG 399
C+ ++ +Y L+DG
Sbjct: 413 GCKPNVYSYTILVDG 427
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 3/201 (1%)
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI-GVRPNAFVYNTLMDGF 260
LL++M D+G+ F IM + K G + +RL+ M + P YN +++
Sbjct: 127 LLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLE-I 185
Query: 261 CLTGRVNR-AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
++G ++ A +F M S T+F++ +++ C E++ ALS+ +M G P+
Sbjct: 186 LVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPN 245
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
VIY TL L + ++V A +L +EM G D T+ I GLCK I EA ++
Sbjct: 246 SVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVN 305
Query: 380 TLRILKCELDIRAYNCLIDGL 400
+ I D Y L++GL
Sbjct: 306 RMLIRGFTPDDITYGYLMNGL 326
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
+G + + + V++ +L NG+ RLL M G+ ++ ++M + G +
Sbjct: 99 KGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQ 158
Query: 269 AKELFVSMESM-GCTHTVFSYS----ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
L + M ++ C T SY+ IL++G C + A +++ +MLS+ I P + +
Sbjct: 159 TTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCH----KVAANVFYDMLSRKIPPTLFTF 214
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
+ L +++V+ A + +M + G ++ Y+T I L K + + EA++L + +
Sbjct: 215 GVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFL 274
Query: 384 LKCELDIRAYNCLIDGL 400
+ C D +N +I GL
Sbjct: 275 MGCVPDAETFNDVILGL 291
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F + +R S P + +FN L L + + L++F++L + G+ PD TYN L++ C
Sbjct: 615 FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLC 674
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRI 103
K G V ++L + F PN T++ L++ L + +
Sbjct: 675 KGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETL 714
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 185/345 (53%), Gaps = 23/345 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ L L + + + + GL D TY +LI+ +CK+G+++ F+V ++
Sbjct: 392 TYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKM 451
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
++ TPN VT+T+L GLC + + A L ++ G E N+FTYN+LINGL + G+
Sbjct: 452 VQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGN- 510
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+++A + M + + PDV TYT++I C + + +
Sbjct: 511 ----------------------LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A LL EM+D+G++P +VT+NV+M+ C +G+++ RLL+ M++ + PN YN+LM
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMK 608
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
+C+ + E++ M S +Y+ILI G+CK + ++ AL + EM+ KG +
Sbjct: 609 QYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRL 668
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
YN L +L + + A +LF++M+++ + A+ Y +ID
Sbjct: 669 TASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYID 713
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 190/395 (48%), Gaps = 15/395 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
CS+NIL L LF + S PD+ TY I+++ +C + + +L
Sbjct: 253 TCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLS 309
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ N V +TS+I LC E ++ +A + + + G + + T+++G R G
Sbjct: 310 EMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKG 369
Query: 137 HTIVALNLFEEMAS-GNGEFGV-----------EGFVDKAKELFLQMKDENINPDVVTYT 184
A N F+EM G GV G + +A+ + +M+D+ ++ D VTYT
Sbjct: 370 DLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYT 429
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+I G+C EA + +M+ + V PNVVT+ + D LCK G + A+ LL M
Sbjct: 430 VLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSK 489
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G+ N F YN+L++G C G + +A + M+ G V++Y+ +I C++KE++ A
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
SL EML KGIKP +V YN L +VE +L + M + +T TY + +
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
C + E+++ + + + YN LI G
Sbjct: 610 YCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKG 644
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 157/359 (43%), Gaps = 23/359 (6%)
Query: 40 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
F + GL D TY LIN C+ G + VL + +AVT+T LI G C
Sbjct: 378 FDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCK 437
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEG 159
++ EA + K+ PNV TY L +GL + G A L EM S E
Sbjct: 438 VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL---- 493
Query: 160 FVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 219
++ TY S+I G C A + +A +I+M + G++P+V T+
Sbjct: 494 -------------------NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYT 534
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
I+ LC++ ++D A LL M+ G++P YN LM+GFC++GRV K L M
Sbjct: 535 TIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
+Y+ L+ YC K ++ +Y MLS+ + P+ YN L + ++ A
Sbjct: 595 NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEA 654
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
EM G +Y I L K EA LF +R + + YN ID
Sbjct: 655 LYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYID 713
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 161/327 (49%), Gaps = 22/327 (6%)
Query: 82 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVA 141
F+ + V+F L+ LC + +A L +LR +G P+ + N ++ L A
Sbjct: 193 AFSSDPVSFDLLL--LC-----LPSAPLLLRLRQYGISPSPESCNAVLCRLPLDE----A 241
Query: 142 LNLFEEMASGN--------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ LF+E+ N G + A +LF +M PDVVTY ++ G+C
Sbjct: 242 VQLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTL 298
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
++ A LL EM +G++ N V + ++ LC G++ +A R+++ M+ GV +A V+
Sbjct: 299 SELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVF 358
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
T+M GFC G + A+ F M+ G +Y+ LING C+ E++ A + EM
Sbjct: 359 TTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMED 418
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG+ D V Y L ++ ++ AF + ++M + V + TY DGLCK +
Sbjct: 419 KGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCA 478
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A EL + EL+I YN LI+GL
Sbjct: 479 ANELLHEMCSKGLELNIFTYNSLINGL 505
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 168/388 (43%), Gaps = 42/388 (10%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
S PV SF++L CL L RL G+ P + N ++ C + F
Sbjct: 195 SSDPV-SFDLLLLCLPS-------APLLLRLRQYGISPSPESCNAVL-CRLPLDEAVQLF 245
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
L N ++ L+K LC RI +A LF ++ P+V TY +++G
Sbjct: 246 QELPE-------KNTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGY 295
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
A+ L EMA+ G+E +NP V YTSVI C
Sbjct: 296 CTLSELETAIKLLSEMAAR----GLE-----------------LNP--VAYTSVIALLCD 332
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
++A ++ +M+ GV + F +M C+ G + A D M + G+ +
Sbjct: 333 EGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVT 392
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
Y L++G C G + A+ + ME G +Y++LI+GYCK ++ A ++ +M+
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
K + P+VV Y L L + V A +L EM G+ + +TY + I+GLCK +
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
+A+ + + D+ Y +I L
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGAL 540
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 14/183 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + G L ++K D SL + + G+ P + TYN+L+N FC GRV G +
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRL 587
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L PN T+ SL+K C E + ++ + PN TYN LI G +
Sbjct: 588 LEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCK 647
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENI--NPDV 180
+ AL EM + +A+ LF +M+ E + PDV
Sbjct: 648 ARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDV 707
Query: 181 VTY 183
+
Sbjct: 708 YNF 710
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 185/345 (53%), Gaps = 23/345 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ L L + + + + GL D TY +LI+ +CK+G+++ F+V ++
Sbjct: 392 TYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKM 451
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
++ TPN VT+T+L GLC + + A L ++ G E N+FTYN+LINGL + G+
Sbjct: 452 VQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGN- 510
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+++A + M + + PDV TYT++I C + + +
Sbjct: 511 ----------------------LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A LL EM+D+G++P +VT+NV+M+ C +G+++ RLL+ M++ + PN YN+LM
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMK 608
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
+C+ + E++ M S +Y+ILI G+CK + ++ AL + EM+ KG +
Sbjct: 609 QYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRL 668
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
YN L +L + + A +LF++M+++ + A+ Y +ID
Sbjct: 669 TASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYID 713
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 190/395 (48%), Gaps = 15/395 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
CS+NIL L LF + S PD+ TY I+++ +C + + +L
Sbjct: 253 TCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLS 309
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ N V +TS+I LC E ++ +A + + + G + + T+++G R G
Sbjct: 310 EMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKG 369
Query: 137 HTIVALNLFEEMAS-GNGEFGV-----------EGFVDKAKELFLQMKDENINPDVVTYT 184
A N F+EM G GV G + +A+ + +M+D+ ++ D VTYT
Sbjct: 370 DLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYT 429
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+I G+C EA + +M+ + V PNVVT+ + D LCK G + A+ LL M
Sbjct: 430 VLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSK 489
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G+ N F YN+L++G C G + +A + M+ G V++Y+ +I C++KE++ A
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
SL EML KGIKP +V YN L +VE +L + M + +T TY + +
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
C + E+++ + + + YN LI G
Sbjct: 610 YCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKG 644
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 157/359 (43%), Gaps = 23/359 (6%)
Query: 40 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
F + GL D TY LIN C+ G + VL + +AVT+T LI G C
Sbjct: 378 FDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCK 437
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEG 159
++ EA + K+ PNV TY L +GL + G A L EM S E
Sbjct: 438 VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL---- 493
Query: 160 FVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 219
++ TY S+I G C A + +A +I+M + G++P+V T+
Sbjct: 494 -------------------NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYT 534
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
I+ LC++ ++D A LL M+ G++P YN LM+GFC++GRV K L M
Sbjct: 535 TIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
+Y+ L+ YC K ++ +Y MLS+ + P+ YN L + ++ A
Sbjct: 595 NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEA 654
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
EM G +Y I L K EA LF +R + + YN ID
Sbjct: 655 LYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYID 713
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 161/327 (49%), Gaps = 22/327 (6%)
Query: 82 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVA 141
F+ + V+F L+ LC + +A L +LR +G P+ + N ++ L A
Sbjct: 193 AFSSDPVSFDLLL--LC-----LPSAPLLLRLRQYGISPSPESCNAVLCRLPLDE----A 241
Query: 142 LNLFEEMASGN--------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ LF+E+ N G + A +LF +M PDVVTY ++ G+C
Sbjct: 242 VQLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTL 298
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
++ A LL EM +G++ N V + ++ LC G++ +A R+++ M+ GV +A V+
Sbjct: 299 SELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVF 358
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
T+M GFC G + A+ F M+ G +Y+ LING C+ E++ A + EM
Sbjct: 359 TTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMED 418
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG+ D V Y L ++ ++ AF + ++M + V + TY DGLCK +
Sbjct: 419 KGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCA 478
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A EL + EL+I YN LI+GL
Sbjct: 479 ANELLHEMCSKGLELNIFTYNSLINGL 505
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 168/388 (43%), Gaps = 42/388 (10%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
S PV SF++L CL L RL G+ P + N ++ C + F
Sbjct: 195 SSDPV-SFDLLLLCLPS-------APLLLRLRQYGISPSPESCNAVL-CRLPLDEAVQLF 245
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
L N ++ L+K LC RI +A LF ++ P+V TY +++G
Sbjct: 246 QELPE-------KNTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGY 295
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
A+ L EMA+ G+E +NP V YTSVI C
Sbjct: 296 CTLSELETAIKLLSEMAAR----GLE-----------------LNP--VAYTSVIALLCD 332
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
++A ++ +M+ GV + F +M C+ G + A D M + G+ +
Sbjct: 333 EGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVT 392
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
Y L++G C G + A+ + ME G +Y++LI+GYCK ++ A ++ +M+
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
K + P+VV Y L L + V A +L EM G+ + +TY + I+GLCK +
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
+A+ + + D+ Y +I L
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGAL 540
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 14/183 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + G L ++K D SL + + G+ P + TYN+L+N FC GRV G +
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRL 587
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L PN T+ SL+K C E + ++ + PN TYN LI G +
Sbjct: 588 LEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCK 647
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENI--NPDV 180
+ AL EM + +A+ LF +M+ E + PDV
Sbjct: 648 ARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDV 707
Query: 181 VTY 183
+
Sbjct: 708 YNF 710
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 185/366 (50%), Gaps = 14/366 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N CL +N H L + + G PD++TYN +INC K G + +
Sbjct: 298 PDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGI 357
Query: 75 LGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ +++ R C P+ TF +LI LC+++R+ EA L +L V G P+V+T+N LIN L
Sbjct: 358 VNQMVDRGCL-PDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALC 416
Query: 134 RTGHTIVALNLFEEMASGN---GEFGVEGFVDK---------AKELFLQMKDENINPDVV 181
+ G + + LFEEM S E +D A +L +M+ V
Sbjct: 417 KVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTV 476
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY ++I C EA+ + +M G+ + VTFN ++D LCK ++D+A+ L++ M
Sbjct: 477 TYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQM 536
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++ G++P+ YN+++ +C G + +A ++ +M + G V +Y LING CK
Sbjct: 537 VKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRT 596
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ AL L M KGI+P YN + LF + + A LF EM G D TY+
Sbjct: 597 QVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIV 656
Query: 362 IDGLCK 367
GLC+
Sbjct: 657 FRGLCR 662
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 186/386 (48%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F L + + L + ++ TG P T N+LIN +CKMGRV
Sbjct: 228 PDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGY 287
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + + F P+ VT+ + + LC + A + + G +P+VFTYNT+IN L
Sbjct: 288 IQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCL-- 345
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
S NGE D+AK + QM D PD T+ ++I C N
Sbjct: 346 ---------------SKNGEL------DEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQN 384
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EA L E+ +G+ P+V TFN++++ LCK G RL + M G P+ YN
Sbjct: 385 RLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYN 444
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+D C G++ A +L MES GC + +Y+ +I+ CK IE A ++ +M +
Sbjct: 445 ILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAH 504
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
GI V +NTL L + +++ A +L ++M ++G+ TY + + CK + +A
Sbjct: 505 GISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKA 564
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
++ T+ E+D+ Y LI+GL
Sbjct: 565 ADILETMTANGFEIDVVTYGTLINGL 590
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 181/374 (48%), Gaps = 12/374 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+N L LA+ + S++ + G+ PD+ T N LI C+ +V ++L +
Sbjct: 163 YNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMS 222
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
P+ TFT+L++G E I A + TK+ GC P T N LING + G
Sbjct: 223 SHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVE 282
Query: 140 VALNLFE-EMASGNGEFGV-----------EGFVDKAKELFLQMKDENINPDVVTYTSVI 187
AL + E+A G V G V A ++ M E +PDV TY +VI
Sbjct: 283 DALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVI 342
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
+ +EAK ++ +M+D+G P+ TFN ++ LC +++EA L + G+
Sbjct: 343 NCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLS 402
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P+ + +N L++ C G + LF M+S GC +Y+ILI+ C ++ AL L
Sbjct: 403 PDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDL 462
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
EM S G V YNT+ L + ++E A ++FD+M G++ T+ T IDGLCK
Sbjct: 463 LKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCK 522
Query: 368 NSYIVEAVELFRTL 381
I +A EL +
Sbjct: 523 AKRIDDATELIEQM 536
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 146/313 (46%), Gaps = 24/313 (7%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
L ++ P V +FNIL L K + LF+ + S+G PD TYNILI+ C MG+
Sbjct: 396 LTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGK 455
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ + +L + + + VT+ ++I LC + RI EA +F ++ G + T+NT
Sbjct: 456 LVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNT 515
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
LI+GL + +D A EL QM E + P +TY S++
Sbjct: 516 LIDGLCKAKR-----------------------IDDATELIEQMVKEGLQPSNITYNSIL 552
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
+C D +A +L M G + +VVT+ +++ LCK G+ A +LL M G+R
Sbjct: 553 THYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIR 612
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK-NKEIEGALS 306
P YN ++ + A LF M +G +Y I+ G C+ I+ A
Sbjct: 613 PTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFD 672
Query: 307 LYGEMLSKGIKPD 319
EM++KG P+
Sbjct: 673 FLVEMVNKGFMPE 685
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 147/315 (46%), Gaps = 23/315 (7%)
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
+ + L+ L SR+ +++ ++ G +P+V T NTLI L R A+ +
Sbjct: 159 DTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLML 218
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
EEM+S + PD T+T++++GF A + +
Sbjct: 219 EEMSS-----------------------HAVAPDETTFTTLMQGFIEEGSIEAALRVKTK 255
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
MM+ G P VT NV+++ CK G++++A + I G P+ YNT + C G
Sbjct: 256 MMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGH 315
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
V+ A ++ M G VF+Y+ +IN KN E++ A + +M+ +G PD +NT
Sbjct: 316 VSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNT 375
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L V L +++E A L E+ G++ D +T+ I+ LCK + LF ++
Sbjct: 376 LIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSG 435
Query: 386 CELDIRAYNCLIDGL 400
C D YN LID L
Sbjct: 436 CAPDEVTYNILIDHL 450
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 131/294 (44%), Gaps = 13/294 (4%)
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG---VEGFV---------DKAKEL 167
P+ Y +I L G + L EM E G V FV D A +L
Sbjct: 87 PSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDL 146
Query: 168 FL-QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
Q+ + D Y ++ + + + EM D+G+QP+VVT N ++ LC
Sbjct: 147 VRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALC 206
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
+ ++ A +L+ M V P+ + TLM GF G + A + M GC+ T
Sbjct: 207 RAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRV 266
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+ ++LINGYCK +E AL + ++ G +PD V YNT L + V A K+ D M
Sbjct: 267 TVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLM 326
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++G D +TY T I+ L KN + EA + + C D +N LI L
Sbjct: 327 LQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVAL 380
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/422 (29%), Positives = 195/422 (46%), Gaps = 59/422 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S N L A+ D + FK + G P ++TYNI+I+C CK G + +
Sbjct: 96 PKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGL 155
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ P+ VT+ S+I G R+ + F +++ CEP+V TYNTLIN +
Sbjct: 156 FEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCK 215
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G + K E F +MK + P+VV+Y++++ FC +
Sbjct: 216 FGK-----------------------LPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKED 252
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+A ++M G+ PN T+ ++D CK G + +A RL D M Q+GV N Y
Sbjct: 253 MMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYT 312
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DG C R+ A+ELF M + G + SY+ LI+G+ K K ++ AL L EM +
Sbjct: 313 ALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGR 372
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT-------------- 360
GIKPD+++Y T L + ++E A + +EMQ G+ A+T+ Y T
Sbjct: 373 GIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEG 432
Query: 361 ---------------------FIDGLCKNSYIVEAVELF-RTLRILKCELDIRAYNCLID 398
IDGLCKN + +A++ F R + + Y +ID
Sbjct: 433 LHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMID 492
Query: 399 GL 400
GL
Sbjct: 493 GL 494
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 196/390 (50%), Gaps = 13/390 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N + K D + F+ + S PD+ TYN LINCFCK G++ G
Sbjct: 166 PDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEF 225
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ +S PN V++++L+ C E + +A + +R G PN TY +L++ +
Sbjct: 226 FREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCK 285
Query: 135 TGHTIVALNLFEEMASGNGEFGV-------EGFVD-----KAKELFLQMKDENINPDVVT 182
G+ A L +EM+ E+ V +G D +A+ELF +M + P++ +
Sbjct: 286 IGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLAS 345
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT++I GF A + + A LL EM +G++P+++ + + LC K++ A +++ M
Sbjct: 346 YTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQ 405
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G++ N F+Y TLMD + + + L M + T ++ +LI+G CKNK +
Sbjct: 406 EKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVS 465
Query: 303 GALSLYGEMLSK-GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A+ +G + + G++ + IY + L + QVE A LF++M + G+ D Y +
Sbjct: 466 KAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSL 525
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIR 391
IDG K +V+A+ L + + E R
Sbjct: 526 IDGKLKQGNVVQALALRDKMAEIGVESGAR 555
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 127/243 (52%)
Query: 158 EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
E ++A + F +MK + P + ++ F + K +M+ G +P V T
Sbjct: 76 EDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFT 135
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
+N+++D +CK G ++ AS L + M G+ P+ YN+++DG+ GR++ F M+
Sbjct: 136 YNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMK 195
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
SM C V +Y+ LIN +CK ++ L + EM G+KP+VV Y+TL + ++
Sbjct: 196 SMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQ 255
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+A K + +M+R G+ + TY + +D CK + +A L + + E ++ Y LI
Sbjct: 256 QALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALI 315
Query: 398 DGL 400
DGL
Sbjct: 316 DGL 318
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 90/188 (47%)
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
P F+ + L + +EA + M + V P N L+ F G+ + K
Sbjct: 61 PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
F M G TVF+Y+I+I+ CK +IE A L+ EM +G+ PD V YN++ +
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
+ +++ F+EM+ D TY T I+ CK + + +E FR ++ + ++ +
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVS 240
Query: 393 YNCLIDGL 400
Y+ L+D
Sbjct: 241 YSTLVDAF 248
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/410 (31%), Positives = 197/410 (48%), Gaps = 17/410 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF Y L+ P V ++ L +N++ D +F R+ G P+ TY+ LIN
Sbjct: 266 IFQYDLS-----PDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGL 320
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C GRV +L ++ P T+T I LCA EA L +++ GC PNV
Sbjct: 321 CNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNV 380
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
TY LI+GL R G VA+ L+ +M E V G A ++F
Sbjct: 381 QTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHW 440
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M+ + TY +I+G C D +A L +M+ G P VVT+N +++ G
Sbjct: 441 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 500
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
++ A+RLLDLM + G P+ + YN L+ GF G++ A F M G SY+
Sbjct: 501 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTT 560
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI+G+ K+ +++ ALSL M G P+V YN + L + ++ A K+ D+M G
Sbjct: 561 LIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQG 620
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + TY T IDGLC+N A ++F + KC ++ Y+ LI GL
Sbjct: 621 LLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGL 670
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 129/394 (32%), Positives = 197/394 (50%), Gaps = 12/394 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S N L LAK + + +L+K++ ++G+ P L T+N LIN K G+V ++L +I
Sbjct: 207 SCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQI 266
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ +P+ T+TSLI G C + A +F ++ GC+PN TY+TLINGL G
Sbjct: 267 FQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRV 326
Query: 139 IVALNLFEEMASGNGEFGVEGFV------------DKAKELFLQMKDENINPDVVTYTSV 186
AL++ EEM E V + ++A EL +MK P+V TYT++
Sbjct: 327 DEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTAL 386
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G A L +M+ +G+ PN VT+N +++ELC G+ A ++ M G
Sbjct: 387 ISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGS 446
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
N YN ++ G CL G + +A LF M MG TV +Y+ LINGY + A
Sbjct: 447 LANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAAR 506
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L M G +PD YN L + ++E A F EM G+ + +Y T IDG
Sbjct: 507 LLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHS 566
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
K+ + A+ L + + C ++ +YN +I+GL
Sbjct: 567 KDGKVDIALSLLERMEEMGCNPNVESYNAVINGL 600
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 126/412 (30%), Positives = 193/412 (46%), Gaps = 15/412 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +FD M+ P V +++ L L D L + + + G+ P +YTY + I
Sbjct: 295 FGVFDRMVKEGCDPNSV-TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPIT 353
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C + ++ R+ + PN T+T+LI GL ++ A L+ K+ G P
Sbjct: 354 ALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVP 413
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG-------------VEGFVDKAKEL 167
N TYN LIN L G AL +F M G+G + G ++KA L
Sbjct: 414 NTVTYNALINELCVGGRFSTALKIFHWM-EGHGSLANTQTYNEIIKGLCLGGDIEKAMVL 472
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
F +M P VVTY ++I G+ + N A LL M + G +P+ T+N ++ K
Sbjct: 473 FEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSK 532
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
GK++ AS M++ G+ PN Y TL+DG G+V+ A L ME MGC V S
Sbjct: 533 WGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVES 592
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y+ +ING K A + +M +G+ P+V+ Y TL L + + AFK+F +M+
Sbjct: 593 YNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDME 652
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + +TY + I GLC+ EA L + + D + LIDG
Sbjct: 653 KRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDG 704
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 177/378 (46%), Gaps = 12/378 (3%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P V ++ L L++ + + L+ ++ GL P+ TYN LIN C GR
Sbjct: 371 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 430
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
S + + N T+ +IKGLC I +A LF K+ G P V TYNT
Sbjct: 431 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT 490
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDEN 175
LING G+ A L + M E F G ++ A F +M +
Sbjct: 491 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG 550
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+NP+ V+YT++I G + A LL M + G PNV ++N +++ L K + EA
Sbjct: 551 LNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAE 610
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
++ D M + G+ PN Y TL+DG C GR A ++F ME C +++YS LI G
Sbjct: 611 KICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGL 670
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
C+ + + A L EM KG+ PD V + +L + +++ AF L M G +
Sbjct: 671 CQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNY 730
Query: 356 WTYRTFIDGLCKNSYIVE 373
TY + GL K ++E
Sbjct: 731 RTYSVLLKGLQKECLLLE 748
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 188/415 (45%), Gaps = 50/415 (12%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F M+ +P PV S+ L +K+ D LSL +R+ G P++ +YN +IN
Sbjct: 543 FQEMVECGLNPNPV-SYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLS 601
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K R S + ++ PN +T+T+LI GLC R A +F + C PN++
Sbjct: 602 KENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 661
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
TY++LI GL + EG D+A+ L +M+ + + PD VT+
Sbjct: 662 TYSSLIYGLCQ-----------------------EGKADEAEILLKEMERKGLAPDEVTF 698
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE---------- 233
TS+I GF + A LL M+D G +PN T++V++ L K + E
Sbjct: 699 TSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAV 758
Query: 234 --------------ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
S LL M +IG P Y+TL+ G C GR A++L M+
Sbjct: 759 YSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKER 818
Query: 280 G-CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
G C YS+LI +CKN E++ AL ++ + +KG + + IY L L + QVE
Sbjct: 819 GFCPDREIYYSLLI-AHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEE 877
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
A LFD M AD + +DGL K + ++L + +I+ Y
Sbjct: 878 AQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTY 932
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 183/386 (47%), Gaps = 28/386 (7%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRS-CFTP 85
+A +K ++V+ F ++ Y +N+ NCF M L R++R F P
Sbjct: 124 VAVHKDTESVIQFFYWISKR----PFYKHNM--NCFISM---------LNRLVRDRVFAP 168
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
+IK E I A ++ G ++++ NTL+ L + A NL+
Sbjct: 169 ADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLY 228
Query: 146 EEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
++M + + +G V +A+ + Q+ +++PDV TYTS+I G C
Sbjct: 229 KQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRN 288
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+ + A + M+ +G PN VT++ +++ LC G++DEA +L+ MI+ G+ P + Y
Sbjct: 289 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTY 348
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
+ C A EL M+ GC V +Y+ LI+G + ++E A+ LY +ML
Sbjct: 349 TLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK 408
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+G+ P+ V YN L L + A K+F M+ G A+T TY I GLC I +
Sbjct: 409 EGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEK 468
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
A+ LF + + + YN LI+G
Sbjct: 469 AMVLFEKMLKMGPLPTVVTYNTLING 494
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 130/313 (41%), Gaps = 36/313 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L L +N +F + P+LYTY+ LI C+ G+ ++
Sbjct: 623 PNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEIL 682
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL-- 132
L + R P+ VTFTSLI G RI A L ++ GC+PN TY+ L+ GL
Sbjct: 683 LKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQK 742
Query: 133 ------------------YRTGHTIVALNLFEEMASGNGEFGVEGFVD------------ 162
+ V + + + E G E +D
Sbjct: 743 ECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRK 802
Query: 163 ----KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
+A++L MK+ PD Y S++ C + + A + + +G Q ++ +
Sbjct: 803 GRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIY 862
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
++ LCK G+++EA L D M++ + V+ L+DG G ++ +L MES
Sbjct: 863 RALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMES 922
Query: 279 MGCTHTVFSYSIL 291
T + +Y IL
Sbjct: 923 KNFTPNIQTYVIL 935
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 126/310 (40%), Gaps = 72/310 (23%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F IF M R P + +++ L L + D L K + GL PD T+ LI+
Sbjct: 645 FKIFHDM-EKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLID 703
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME--------------- 105
F +GR+ H F++L R++ PN T++ L+KGL E ++E
Sbjct: 704 GFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSP 763
Query: 106 ---------AAALFTKLRVFGCEPNVFTYNTLINGLYRTG-------------------- 136
+ L ++ GCEP + TY+TL++GL R G
Sbjct: 764 HEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPD 823
Query: 137 ----HTIV-----------ALNLFEEMASGNGEFGVE------------GFVDKAKELFL 169
++++ AL +F + + + + G V++A+ LF
Sbjct: 824 REIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFD 883
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
M ++ N D + +T ++ G + + LL M + PN+ T+ ++ EL + G
Sbjct: 884 NMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIG 943
Query: 230 KMDEASRLLD 239
K E+ L D
Sbjct: 944 KSIESEPLAD 953
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/399 (31%), Positives = 200/399 (50%), Gaps = 17/399 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S+N++ L ++F + S G+ P +YT+ +++ C + V +
Sbjct: 168 PTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSL 227
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + PN+V + +LI LC +R+ EA L + + CEP+V T+N +I+GL R
Sbjct: 228 LRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCR 287
Query: 135 TGHTIVALNLFEEM-----ASGNGEFGV-------EGFVDKAKELFLQMKDENINPDVVT 182
G A L + M ++ +G G VD+A+ L ++ NP+ V
Sbjct: 288 AGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIP----NPNTVL 343
Query: 183 YTSVIRGFCYANDWNEAKCLLI-EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y ++I G+ + + EAK LL M+ G +P+ TFN+++D L K G + A LL+ M
Sbjct: 344 YNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEM 403
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ PN Y L++GFC GR+ A E+ SM + G + Y+ LI CK+ I
Sbjct: 404 VAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNI 463
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E AL L+GEM KG KPD+ +N+L L + H++E A L+ +M +GV A+T TY T
Sbjct: 464 EEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTL 523
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ I +A +L + C LD YN LI L
Sbjct: 524 VHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKAL 562
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 192/399 (48%), Gaps = 9/399 (2%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V +F ++ L D+ SL + + G P+ Y LI+ C+ RVS
Sbjct: 199 RGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSE 258
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+L + C P+ TF +I GLC RI EAA L ++ + G + TY L++
Sbjct: 259 ALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMH 318
Query: 131 GLYRTGHTIVALNLFEEMASGN--------GEFGVEGFVDKAKEL-FLQMKDENINPDVV 181
GL R G A L ++ + N + G ++AK+L + M PD
Sbjct: 319 GLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAY 378
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
T+ +I G A LL EM+ + +PNV+T+ ++++ CK G+++EA+ +++ M
Sbjct: 379 TFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSM 438
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
G+ N YN L+ C G + A +LF M GC +++++ LING CKN ++
Sbjct: 439 SAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKM 498
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E ALSLY +M +G+ + V YNTL +++AFKL DEM G D TY
Sbjct: 499 EEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGL 558
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I LCK + + + LF + I + N LI GL
Sbjct: 559 IKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGL 597
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 127/396 (32%), Positives = 189/396 (47%), Gaps = 17/396 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FN + L + L R+ G D TY L++ C+MG+V +
Sbjct: 273 PDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARAL 332
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPNVFTYNTLINGLY 133
L +I PN V + +LI G A R EA L + + + G EP+ +T+N +I+GL
Sbjct: 333 LNKIP----NPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLV 388
Query: 134 RTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVV 181
+ G+ + AL L EM + E F +G +++A E+ M + ++ + V
Sbjct: 389 KKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTV 448
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y +I C + EA L EM +G +P++ TFN +++ LCKN KM+EA L M
Sbjct: 449 GYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDM 508
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
GV N YNTL+ F + + +A +L M GC +Y+ LI CK +
Sbjct: 509 FLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAV 568
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E L L+ EML KGI P ++ N L L +V A K +M G+ D TY +
Sbjct: 569 EKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSL 628
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
I+GLCK ++ EA LF L+ D YN LI
Sbjct: 629 INGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLI 664
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 159/324 (49%), Gaps = 12/324 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FNI+ L K + + L L + + P++ TY ILIN FCK GR+ +
Sbjct: 375 PDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEI 434
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + + N V + LI LC + I EA LF ++ GC+P+++T+N+LINGL +
Sbjct: 435 VNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCK 494
Query: 135 TGHTIVALNLFEEM------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
AL+L+ +M + F + + +A +L +M D +T
Sbjct: 495 NHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNIT 554
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I+ C + L EM+ +G+ P +++ N+++ LC+ GK+++A + L MI
Sbjct: 555 YNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMI 614
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ P+ YN+L++G C G V A LF ++S G +Y+ LI+ +C
Sbjct: 615 HRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFN 674
Query: 303 GALSLYGEMLSKGIKPDVVIYNTL 326
A L + + G P+ V ++ L
Sbjct: 675 DACLLLYKGVDSGFIPNEVTWSIL 698
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 136/286 (47%), Gaps = 28/286 (9%)
Query: 115 VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDE 174
V+ C+P +YN +++ L VA N+F +M S
Sbjct: 163 VYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLS-----------------------R 199
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
++P V T+ V++ C ++ + A LL +M G PN V + ++ LC+N ++ EA
Sbjct: 200 GVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEA 259
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+LL+ M + P+ +N ++ G C GR++ A +L M G + +Y L++G
Sbjct: 260 LQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHG 319
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK-LFDEMQRDGVAA 353
C+ +++ A +L L+K P+ V+YNTL + E A L++ M G
Sbjct: 320 LCRMGQVDEARAL----LNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEP 375
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
D +T+ IDGL K Y+V A+EL + + E ++ Y LI+G
Sbjct: 376 DAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILING 421
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 121/247 (48%), Gaps = 19/247 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +FN L L KN + LSL+ + G+ + TYN L++ F + F +
Sbjct: 480 PDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKL 539
Query: 75 LGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ +L R C N +T+ LIK LC + + LF ++ G P + + N LI+GL
Sbjct: 540 VDEMLFRGCPLDN-ITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLC 598
Query: 134 RTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDV 180
RTG AL ++M NG + G V +A LF +++ E I PD
Sbjct: 599 RTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKM-GHVQEASNLFNKLQSEGIRPDA 657
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL-LD 239
+TY ++I C+ +N+A LL + +D G PN VT++++++ + K K+ +R D
Sbjct: 658 ITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVK--KIPWGARFSKD 715
Query: 240 LMIQIGV 246
++ GV
Sbjct: 716 FTVECGV 722
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 70/130 (53%), Gaps = 1/130 (0%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F + D ML R P ++N L L K + L LF+ + G+FP + + NILI+
Sbjct: 537 FKLVDEML-FRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILIS 595
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C+ G+V+ L ++ TP+ VT+ SLI GLC + EA+ LF KL+ G P
Sbjct: 596 GLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRP 655
Query: 121 NVFTYNTLIN 130
+ TYNTLI+
Sbjct: 656 DAITYNTLIS 665
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 98/208 (47%), Gaps = 3/208 (1%)
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR-LLDLMIQIGVRPNAFVY 253
D+ + LL +M D+G+ F +IM K G +A+R LLD+ P Y
Sbjct: 114 DFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSY 173
Query: 254 NTLMDGFCLTGRVNR-AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
N ++D + G R A +F M S G + TV+++ +++ C E++ A SL +M
Sbjct: 174 NVVLD-ILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMA 232
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
G P+ VIY TL L E ++V A +L ++M D T+ I GLC+ I
Sbjct: 233 KHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIH 292
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
EA +L + + D Y L+ GL
Sbjct: 293 EAAKLLDRMLLRGFSTDALTYGYLMHGL 320
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/378 (31%), Positives = 200/378 (52%), Gaps = 18/378 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V SF IL G + + L ++K + G+ PDL +++ LI F + G++ H
Sbjct: 198 PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAY 257
Query: 75 LGRILRSCF--TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
L R +R CF P+ V +T +I G C + +A + ++ GC P+V TYNTL+NGL
Sbjct: 258 L-REMR-CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL 315
Query: 133 YRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDV 180
+ + A L EM + +EG +DKA +LF M ++ + PD+
Sbjct: 316 CKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDI 375
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY ++I G C D ++A L +M + + PN VT+++++D C+ G++++A LD
Sbjct: 376 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDE 435
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
MI G+ PN YN+++ G+C +G V++ ++ M + + +Y+ LI+GY K +
Sbjct: 436 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK 495
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH-QVERAFKLFDEMQRDGVAADTWTYR 359
+ A L M + ++PDVV YN L + F +H V+ A +F++M G+ D +TY
Sbjct: 496 MHDAFKLLNMMEKEKVQPDVVTYNML-INGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYM 554
Query: 360 TFIDGLCKNSYIVEAVEL 377
+ I+G EA +L
Sbjct: 555 SMINGHVTAGNSKEAFQL 572
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 201/393 (51%), Gaps = 12/393 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+ NI+ K +D V ++ + +FPD+ T+N++++ + G ++ +
Sbjct: 97 TLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM 156
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ P VT+ S++KGLC +A +F ++ FG P+V ++ LI G R G
Sbjct: 157 VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEI 216
Query: 139 IVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
AL +++EM G F G +D A +M+ + PD V YT V
Sbjct: 217 EEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 276
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I GFC A ++A + EM+ G P+VVT+N +++ LCK ++ +A LL+ M + GV
Sbjct: 277 IGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 336
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+ + TL+ G+C+ G++++A +LF +M + + +Y+ LI+G C+ +++ A
Sbjct: 337 PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAND 396
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L+ +M S+ I P+ V Y+ L E QVE AF DEM G+ + TY + I G C
Sbjct: 397 LWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYC 456
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
++ + + + + + + K D+ YN LI G
Sbjct: 457 RSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 489
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 190/385 (49%), Gaps = 23/385 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N + L ++ +D +FK ++ G+ PD+ ++ ILI FC++G + +
Sbjct: 163 PGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKI 222
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ P+ V+F+ LI ++ A A ++R FG P+ Y +I G R
Sbjct: 223 YKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCR 282
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G AL + +EM G G PDVVTY +++ G C
Sbjct: 283 AGLMSDALRVRDEMV-GCGCL----------------------PDVVTYNTLLNGLCKER 319
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+A+ LL EM ++GV P++ TF ++ C GK+D+A +L D M+ +RP+ YN
Sbjct: 320 RLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYN 379
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+DG C G +++A +L+ M S +YSILI+ +C+ ++E A EM++K
Sbjct: 380 TLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK 439
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
GI P+++ YN++ V + K +M + V+ D TY T I G K + +A
Sbjct: 440 GILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDA 499
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+L + K + D+ YN LI+G
Sbjct: 500 FKLLNMMEKEKVQPDVVTYNMLING 524
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 169/355 (47%), Gaps = 47/355 (13%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P + SF+ L G A+ D ++ + + GL PD Y ++I FC+ G
Sbjct: 226 MRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGL 285
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+S V ++ P+ VT+ +L+ GLC E R+++A L ++R G P++ T+ T
Sbjct: 286 MSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTT 345
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMK--- 172
LI+G G AL LF+ M + + +G +DKA +L+ M
Sbjct: 346 LIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE 405
Query: 173 ----------------------------DENIN----PDVVTYTSVIRGFCYANDWNEAK 200
DE IN P+++TY S+I+G+C + + ++ +
Sbjct: 406 IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQ 465
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
L +MM V P+++T+N ++ K KM +A +LL++M + V+P+ YN L++GF
Sbjct: 466 KFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGF 525
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
+ G V A +F M + G ++Y +ING+ + A L+ EML +G
Sbjct: 526 SVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 152/315 (48%), Gaps = 23/315 (7%)
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
N T ++ C + A+ +++ P+V T+N +++ +R G A+ L
Sbjct: 94 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 153
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
+ M S + + P +VTY SV++G C + W++A + E
Sbjct: 154 DSMVS-----------------------KGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKE 190
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M D GV P+V +F +++ C+ G+++EA ++ M G++P+ ++ L+ F G+
Sbjct: 191 MDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGK 250
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
++ A M G Y+++I G+C+ + AL + EM+ G PDVV YNT
Sbjct: 251 MDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNT 310
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L L + ++ A L +EM+ GV D T+ T I G C + +A++LF T+ +
Sbjct: 311 LLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR 370
Query: 386 CELDIRAYNCLIDGL 400
DI YN LIDG+
Sbjct: 371 LRPDIVTYNTLIDGM 385
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 125/226 (55%), Gaps = 2/226 (0%)
Query: 177 NPDVVTYT--SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
N +V TYT ++ +C A ++++ ++ EM + V P+VVT NV++D + G + A
Sbjct: 90 NSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAA 149
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
L+D M+ G++P YN+++ G C +G ++A E+F M+ G V S++ILI G
Sbjct: 150 MALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGG 209
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
+C+ EIE AL +Y EM +GIKPD+V ++ L + +++ A EM+ G+ D
Sbjct: 210 FCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPD 269
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Y I G C+ + +A+ + + C D+ YN L++GL
Sbjct: 270 GVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL 315
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 11/182 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F D M+N + P + ++N + ++ + +++ + PDL TYN LI+
Sbjct: 430 FGFLDEMIN-KGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIH 488
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+ K ++ F +L + + P+ VT+ LI G + EA +F K+ G EP
Sbjct: 489 GYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEP 548
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEM---------ASGNGEF-GVEGFVDKAKELFLQ 170
+ +TY ++ING G++ A L +EM A+G +F ++ + K++ +
Sbjct: 549 DRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKEKRRAAGTVQFVNIQNSAESLKQMPMD 608
Query: 171 MK 172
+K
Sbjct: 609 LK 610
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/378 (31%), Positives = 200/378 (52%), Gaps = 18/378 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V SF IL G + + L ++K + G+ PDL +++ LI F + G++ H
Sbjct: 259 PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAY 318
Query: 75 LGRILRSCF--TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
L R +R CF P+ V +T +I G C + +A + ++ GC P+V TYNTL+NGL
Sbjct: 319 L-REMR-CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL 376
Query: 133 YRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDV 180
+ + A L EM + +EG +DKA +LF M ++ + PD+
Sbjct: 377 CKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDI 436
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY ++I G C D ++A L +M + + PN VT+++++D C+ G++++A LD
Sbjct: 437 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDE 496
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
MI G+ PN YN+++ G+C +G V++ ++ M + + +Y+ LI+GY K +
Sbjct: 497 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK 556
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH-QVERAFKLFDEMQRDGVAADTWTYR 359
+ A L M + ++PDVV YN L + F +H V+ A +F++M G+ D +TY
Sbjct: 557 MHDAFKLLNMMEKEKVQPDVVTYNML-INGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYM 615
Query: 360 TFIDGLCKNSYIVEAVEL 377
+ I+G EA +L
Sbjct: 616 SMINGHVTAGNSKEAFQL 633
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 201/393 (51%), Gaps = 12/393 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+ NI+ K +D V ++ + +FPD+ T+N++++ + G ++ +
Sbjct: 158 TLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM 217
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ P VT+ S++KGLC +A +F ++ FG P+V ++ LI G R G
Sbjct: 218 VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEI 277
Query: 139 IVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
AL +++EM G F G +D A +M+ + PD V YT V
Sbjct: 278 EEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 337
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I GFC A ++A + EM+ G P+VVT+N +++ LCK ++ +A LL+ M + GV
Sbjct: 338 IGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 397
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+ + TL+ G+C+ G++++A +LF +M + + +Y+ LI+G C+ +++ A
Sbjct: 398 PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAND 457
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L+ +M S+ I P+ V Y+ L E QVE AF DEM G+ + TY + I G C
Sbjct: 458 LWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYC 517
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
++ + + + + + + K D+ YN LI G
Sbjct: 518 RSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 550
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 190/385 (49%), Gaps = 23/385 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N + L ++ +D +FK ++ G+ PD+ ++ ILI FC++G + +
Sbjct: 224 PGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKI 283
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ P+ V+F+ LI ++ A A ++R FG P+ Y +I G R
Sbjct: 284 YKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCR 343
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G AL + +EM G G PDVVTY +++ G C
Sbjct: 344 AGLMSDALRVRDEMV-GCGCL----------------------PDVVTYNTLLNGLCKER 380
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+A+ LL EM ++GV P++ TF ++ C GK+D+A +L D M+ +RP+ YN
Sbjct: 381 RLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYN 440
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+DG C G +++A +L+ M S +YSILI+ +C+ ++E A EM++K
Sbjct: 441 TLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK 500
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
GI P+++ YN++ V + K +M + V+ D TY T I G K + +A
Sbjct: 501 GILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDA 560
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+L + K + D+ YN LI+G
Sbjct: 561 FKLLNMMEKEKVQPDVVTYNMLING 585
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 171/359 (47%), Gaps = 47/359 (13%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P + SF+ L G A+ D ++ + + GL PD Y ++I FC+ G
Sbjct: 287 MRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGL 346
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+S V ++ P+ VT+ +L+ GLC E R+++A L ++R G P++ T+ T
Sbjct: 347 MSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTT 406
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMK--- 172
LI+G G AL LF+ M + + +G +DKA +L+ M
Sbjct: 407 LIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE 466
Query: 173 ----------------------------DENIN----PDVVTYTSVIRGFCYANDWNEAK 200
DE IN P+++TY S+I+G+C + + ++ +
Sbjct: 467 IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQ 526
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
L +MM V P+++T+N ++ K KM +A +LL++M + V+P+ YN L++GF
Sbjct: 527 KFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGF 586
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
+ G V A +F M + G ++Y +ING+ + A L+ EML +G PD
Sbjct: 587 SVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 152/315 (48%), Gaps = 23/315 (7%)
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
N T ++ C + A+ +++ P+V T+N +++ +R G A+ L
Sbjct: 155 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 214
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
+ M S + + P +VTY SV++G C + W++A + E
Sbjct: 215 DSMVS-----------------------KGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKE 251
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M D GV P+V +F +++ C+ G+++EA ++ M G++P+ ++ L+ F G+
Sbjct: 252 MDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGK 311
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
++ A M G Y+++I G+C+ + AL + EM+ G PDVV YNT
Sbjct: 312 MDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNT 371
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L L + ++ A L +EM+ GV D T+ T I G C + +A++LF T+ +
Sbjct: 372 LLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR 431
Query: 386 CELDIRAYNCLIDGL 400
DI YN LIDG+
Sbjct: 432 LRPDIVTYNTLIDGM 446
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 125/226 (55%), Gaps = 2/226 (0%)
Query: 177 NPDVVTYT--SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
N +V TYT ++ +C A ++++ ++ EM + V P+VVT NV++D + G + A
Sbjct: 151 NSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAA 210
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
L+D M+ G++P YN+++ G C +G ++A E+F M+ G V S++ILI G
Sbjct: 211 MALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGG 270
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
+C+ EIE AL +Y EM +GIKPD+V ++ L + +++ A EM+ G+ D
Sbjct: 271 FCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPD 330
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Y I G C+ + +A+ + + C D+ YN L++GL
Sbjct: 331 GVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL 376
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 1/148 (0%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F D M+N + P + ++N + ++ + +++ + PDL TYN LI+
Sbjct: 491 FGFLDEMIN-KGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIH 549
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+ K ++ F +L + + P+ VT+ LI G + EA +F K+ G EP
Sbjct: 550 GYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEP 609
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEM 148
+ +TY ++ING G++ A L +EM
Sbjct: 610 DRYTYMSMINGHVTAGNSKEAFQLHDEM 637
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 196/397 (49%), Gaps = 12/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L K + V SLF + G PD+ TYN LINC+CK ++ F
Sbjct: 263 PDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEY 322
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + PN VT+++LI C E + A L +R G PN FTY +LI+ +
Sbjct: 323 FSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCK 382
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G+ A L +M + + G + +A+E+F M + I+P+
Sbjct: 383 AGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQV 442
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+++ G+ A +A +L +M + ++P+++ + I+ C K++E +L+ M
Sbjct: 443 YTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMK 502
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ N + T++D + G+ + A F M+ +G T+ +Y +LI+G C+ +E
Sbjct: 503 SRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVE 562
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ + MLS G++P+V +Y +L L + +E A KLFDEMQ G+ D + I
Sbjct: 563 LAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALI 622
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
DG K+ + EA+ L + L E D+ Y L+ G
Sbjct: 623 DGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSG 659
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/410 (31%), Positives = 200/410 (48%), Gaps = 15/410 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F M N R + P S N L L+K+ + V F + G+ P ++TYN++I+ C
Sbjct: 183 FSRMRNFR-TLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLC 241
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K G + + + ++ +P+ VT+ SLI G + E A+LF +++ GC P++
Sbjct: 242 KEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDII 301
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQ 170
TYN LIN + A F EM + NG F EG + A +L
Sbjct: 302 TYNGLINCYCKFEKMPRAFEYFSEMKN-NGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXD 360
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M+ + P+ TYTS+I C A + EA LL +M+ GV+ N+VT+ ++D LCK G+
Sbjct: 361 MRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGR 420
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
M EA + M++ G+ PN VY L+ G+ R+ A ++ M + Y
Sbjct: 421 MIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGS 480
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+I G+C +++E + EM S+GI + VI T+ F+ + A F EMQ G
Sbjct: 481 IIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVG 540
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
V A TY IDGLC+ + AV+ F + L + ++ Y LIDGL
Sbjct: 541 VEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGL 590
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 172/379 (45%), Gaps = 12/379 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N L C K + F + + GL P++ TY+ LI+ FCK G + +
Sbjct: 298 PDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKL 357
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + R+ PN T+TSLI C + EA L + G + N+ TY L++GL +
Sbjct: 358 LXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCK 417
Query: 135 TGHTIVALNLFEEM----ASGNGEFG---VEGFV-----DKAKELFLQMKDENINPDVVT 182
G I A +F M S N + V G++ + A ++ QM + NI PD++
Sbjct: 418 AGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLIL 477
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S+I G C E K +L EM +G+ N V I+D K GK +A M
Sbjct: 478 YGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQ 537
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+GV Y L+DG C G V A + F M S+G V Y+ LI+G C N IE
Sbjct: 538 DVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIE 597
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ EM +G+ PD+ + L + ++ A L M + D Y + +
Sbjct: 598 SAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLV 657
Query: 363 DGLCKNSYIVEAVELFRTL 381
G + + +A + F +
Sbjct: 658 SGFSQCGELHQARKFFNEM 676
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 175/393 (44%), Gaps = 47/393 (11%)
Query: 55 YNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLR 114
+++L + F ++G + R+ P A + L+ L F +
Sbjct: 163 FDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMI 222
Query: 115 VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS---------------GNGEFG--- 156
G P+VFTYN +I+ L + G + LF +M G G+ G
Sbjct: 223 GAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLE 282
Query: 157 --------------------VEGFVD---------KAKELFLQMKDENINPDVVTYTSVI 187
G ++ +A E F +MK+ + P+VVTY+++I
Sbjct: 283 EVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLI 342
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
FC A LL +M G+ PN T+ ++D CK G + EA +LL+ M+Q GV+
Sbjct: 343 DAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVK 402
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
N Y L+DG C GR+ A+E+F SM G + Y+ L++GY K + +E A+ +
Sbjct: 403 LNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKI 462
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
+M IKPD+++Y ++ ++E + +EM+ G++A+ T ID K
Sbjct: 463 LKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFK 522
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+A+ F+ ++ + E I Y LIDGL
Sbjct: 523 AGKSSDALNFFQEMQDVGVEATIVTYCVLIDGL 555
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%)
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
V++ L F G + A E F M + S + L++ K+ + + +M
Sbjct: 162 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 221
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
+ GI P V YN + L + +E + +LF +M+ G++ D TY + IDG K +
Sbjct: 222 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 281
Query: 372 VEAVELFRTLRILKCELDIRAYNCLID 398
E LF ++ + C DI YN LI+
Sbjct: 282 EEVASLFNEMKDVGCVPDIITYNGLIN 308
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/360 (33%), Positives = 182/360 (50%), Gaps = 26/360 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N+L K SL K + G P+++TY+I+INC+CK+ +V + V
Sbjct: 206 PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEV 265
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ S PNAVTF +LI G C + +A LF ++ GC+ + TYNTLI+ L +
Sbjct: 266 FMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCK 325
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G V A +LF +++ + P +VTY S+I+GFC A
Sbjct: 326 K----------------------RGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDAR 363
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+EA EM + PNV+T+++++D LCK +M EA++ L+ M G P Y
Sbjct: 364 RLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYG 422
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L++GFC G + A F M+ GC ++ LI+G CK + L L M ++
Sbjct: 423 GLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAE 482
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G KPDV+ YN L L ++VE A +LFD M A + T+ I GLC + EA
Sbjct: 483 GCKPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVEEA 539
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 202/428 (47%), Gaps = 50/428 (11%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
N L L + +D L LFK + + P+ +TYN+LI FCK G++ V +
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
S PNA T +L+ GLC ++ A LF +++ P ++N L+ G + G
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120
Query: 141 ALNLFEEM-------ASGNGEFGVEGF---------VDKAKELFLQMKDENI-------- 176
AL ++M A+G ++G +++A E F +MK +
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180
Query: 177 ------------------------NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
+PD++TY ++ G+C EA+ L+ E++ G +
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYE 240
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
PNV T+++I++ CK K++EA + MI+ PNA +NTL+ GFC G + A +L
Sbjct: 241 PNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKL 300
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNK-EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
F ME +GC T+ +Y+ LI+ CK + + A+ L+ ++ G+ P +V YN+L
Sbjct: 301 FAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFC 360
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIR 391
+ ++ A + FDEM+ A + TY IDGLCK + EA + ++ +
Sbjct: 361 DARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVV 419
Query: 392 AYNCLIDG 399
Y LI+G
Sbjct: 420 TYGGLING 427
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 183/387 (47%), Gaps = 31/387 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S++IL L+ + +LF + + PD+ TYN+L++ +CK+G+ +
Sbjct: 174 PDLESYHILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQSL 230
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ IL++ + PN T++ +I C ++ EA +F K+ C PN T+NTLI G
Sbjct: 231 MKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAG--- 287
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
F G ++ A +LF +M+ +VTY ++I C
Sbjct: 288 --------------------FCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKR 327
Query: 195 DW-NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
A L ++ G+ P +VT+N ++ C ++ EA + D M + PN Y
Sbjct: 328 GGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITY 386
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
+ L+DG C R+ A + M++ G T TV +Y LING+CK E++ AL + +M
Sbjct: 387 SILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKL 446
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
G P+ VI+NTL L + + +L M +G D TY I GLC + + +
Sbjct: 447 AGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVED 506
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A LF + C ++ +N LI GL
Sbjct: 507 AQRLFDG---MACAPNVTTFNFLIRGL 530
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 109/236 (46%), Gaps = 17/236 (7%)
Query: 17 VCSFNILFGCLAKNKH-YDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVL 75
+ ++N L L K + T + LF +L GL P + TYN LI FC R+S
Sbjct: 313 IVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYF 372
Query: 76 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRT 135
+ C PN +T++ LI GLC R+ EAA ++ G P V TY LING +
Sbjct: 373 DEMEGKC-APNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKC 431
Query: 136 GHTIVALNLFEEM-----ASGNGEFG--VEGFVDKAK-----ELFLQMKDENINPDVVTY 183
G AL FE+M A F ++G + L M E PDV+TY
Sbjct: 432 GELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITY 491
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
+I G C AN +A+ L M PNV TFN ++ LC K++EA +LD
Sbjct: 492 NCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILD 544
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 4/186 (2%)
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
N ++ L K D+A RL ++ PNA YN L+ GFC G++++A +F M+S
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
G + + L+ G C+ ++ AL L+ EM + P +N L F +V
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLC----KNSYIVEAVELFRTLRILKCELDIRAYN 394
A +M++ + T TY + GLC + + +A+E F+ ++ E D+ +Y+
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180
Query: 395 CLIDGL 400
L+ L
Sbjct: 181 ILLSAL 186
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 203/412 (49%), Gaps = 13/412 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ ++ M MR V +FNI+ L K + + G+ P++ TYN +I+
Sbjct: 176 WVLYAEMFRMRIKSS-VVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIH 234
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+C GRV ++ + P++ T+ S I G+C E ++ EA+ + K++ G P
Sbjct: 235 GYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRP 294
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELF 168
TYNTLI+G G+ +A + ++M V + +D+A +
Sbjct: 295 TAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGII 354
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+M ++ + PD VTY +I G+C + +A L EM+ +G+QP VT+ ++ L K
Sbjct: 355 KEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKR 414
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G+M +A L + +++ G+ P+ ++N L+DG C G ++RA + M+ M ++
Sbjct: 415 GRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTF 474
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ L+ G C+ ++E A L EM S+GIKPD + YNTL + ++ AF++ DEM
Sbjct: 475 NTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLS 534
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G TY I GLCKN A +L + + + Y LI+G+
Sbjct: 535 IGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 180/380 (47%), Gaps = 23/380 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+++L + K D F + G+ P ++ N +++ F K R +V+ +
Sbjct: 124 YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMF 183
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
R + VTF +I LC E ++ +A + G +PNV TYNT+I+G
Sbjct: 184 RMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHG-------- 235
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
+ G V+ A+ +F MK + PD TY S I G C EA
Sbjct: 236 ---------------YCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEA 280
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
+L +M + G++P VT+N ++D C G ++ A D M++ G+ P YN L+
Sbjct: 281 SGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHA 340
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
L +++ A + M G +Y+ILINGYC+ ++ A +L+ EM+SKGI+P
Sbjct: 341 LFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPT 400
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
V Y +L VL + ++++A LF+++ R G+ D + IDG C N + A + +
Sbjct: 401 RVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLK 460
Query: 380 TLRILKCELDIRAYNCLIDG 399
+ +K D +N L+ G
Sbjct: 461 EMDQMKVVPDEVTFNTLMQG 480
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 115/231 (49%), Gaps = 13/231 (5%)
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
LQ+ E IN V + V N+ A+ +L G++ V+ +++++ C+
Sbjct: 88 LQLLKETINSGVYSIREVF------NELGVARGVL------GIKTYVL-YDLLIRACCEL 134
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
+ D+A D+M GV P+ N ++ F + R +A L+ M M +V ++
Sbjct: 135 KRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTF 194
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+I+IN CK +++ A G M + GIKP+VV YNT+ +VE A +FD M+
Sbjct: 195 NIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKC 254
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
GV D++TY +FI G+CK + EA + ++ + YN LIDG
Sbjct: 255 RGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDG 305
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 105/220 (47%)
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
V Y +IR C ++A M +GV P+V N ++ K+ + ++A L
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M ++ ++ + +N +++ C G++ +AKE ME++G V +Y+ +I+GYC
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+EGA ++ M +G+KPD Y + + + ++E A + ++M+ G+ TY T
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNT 301
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
IDG C + A + + + YN LI L
Sbjct: 302 LIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHAL 341
>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 450
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/330 (34%), Positives = 182/330 (55%), Gaps = 16/330 (4%)
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
TP +TF +LI GLC E R++EAAAL K+ G +V TY T++NG+ + G T AL
Sbjct: 6 LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 65
Query: 143 NLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
NL +M + + V +G A+ LF +M ++ I P+V TY +I GF
Sbjct: 66 NLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGF 125
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C W++A+ LL +M+++ + P+V+TFN ++ K GK+ EA +L D M+ + P+
Sbjct: 126 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 185
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
YN+++ GFC R + AK +F M S V +++ +I+ YC+ K ++ + L E
Sbjct: 186 VTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLRE 241
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
+ +G+ + YNTL E+ + A LF EM GV DT T + G C+N
Sbjct: 242 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 301
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ EA+ELF +++ K +LD AYN +I G+
Sbjct: 302 LEEALELFEVIQMSKIDLDTVAYNIIIHGM 331
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 129/397 (32%), Positives = 195/397 (49%), Gaps = 16/397 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FN L L +L ++ GL D+ TY ++N CKMG +
Sbjct: 8 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 67
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ + P+ V ++++I LC + +A LF+++ G PNVFTYN +I+G
Sbjct: 68 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 127
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G A L +M V EG + +A++L +M I PD VT
Sbjct: 128 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 187
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S+I GFC N +++AK M D P+VVTFN I+D C+ ++DE +LL +
Sbjct: 188 YNSMIYGFCKHNRFDDAK----HMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 243
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ N YNTL+ GFC +N A++LF M S G + +IL+ G+C+N+++E
Sbjct: 244 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 303
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL L+ + I D V YN + + + +V+ A+ LF + GV D TY I
Sbjct: 304 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 363
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G C S I +A LF ++ E D YN LI G
Sbjct: 364 SGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 400
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 180/357 (50%), Gaps = 8/357 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L K+ H+ LF + G+ P+++TYN +I+ FC GR S +
Sbjct: 78 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 137
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+ +TF +LI E ++ EA L ++ P+ TYN++I G +
Sbjct: 138 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 197
Query: 135 TGHTIVALNLFEEMASGN--------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
A ++F+ MAS + + VD+ +L ++ + + TY ++
Sbjct: 198 HNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 257
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I GFC ++ N A+ L EM+ GV P+ +T N+++ C+N K++EA L +++ +
Sbjct: 258 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 317
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+ YN ++ G C +V+ A +LF S+ G V +Y+++I+G+C I A
Sbjct: 318 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 377
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
L+ +M G +PD YNTL + +++++ +L EM+ +G + D +T + D
Sbjct: 378 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 434
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 62/124 (50%)
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
M +G T V +++ LING C + A +L +M+ KG+ DVV Y T+ + ++
Sbjct: 1 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
+ A L +M+ + D Y ID LCK+ + +A LF + ++ YNC
Sbjct: 61 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120
Query: 396 LIDG 399
+IDG
Sbjct: 121 MIDG 124
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%)
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M+ G+ P V+ +NTL L +V A L ++M G+ D TY T ++G+CK
Sbjct: 1 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
A+ L + + D+ Y+ +ID L
Sbjct: 61 TKSALNLLSKMEETHIKPDVVIYSAIIDRL 90
>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
Length = 332
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 175/310 (56%), Gaps = 16/310 (5%)
Query: 85 PNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNL 144
P+ VTFT+L+ GLC E R+++A AL ++ G +P Y T+INGL + G T ALNL
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63
Query: 145 FEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+M + + V +G A+ LF +M D+ I PDV+TY+ +I FC
Sbjct: 64 LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
+ W +A+ LL +M+++ + P+VVTF+ +++ L K GK+ EA + M++ G+ P
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTIT 183
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
YN+++DGFC R+N AK + SM S C+ V ++S LINGYCK K ++ + ++ EM
Sbjct: 184 YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 243
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
+GI + V Y TL ++ ++ A L + M GVA + T+++ + LC +
Sbjct: 244 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELR 303
Query: 373 EAVELFRTLR 382
+A + L+
Sbjct: 304 KAFAILEDLQ 313
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 160/318 (50%), Gaps = 16/318 (5%)
Query: 46 TGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME 105
TG PD+ T+ L+N C GRV ++ R++ P + ++I GLC
Sbjct: 4 TGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTES 59
Query: 106 AAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------G 153
A L +K+ + +V YN +I+ L + GH I A NLF EM
Sbjct: 60 ALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMID 119
Query: 154 EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
F G A++L M + INPDVVT++++I +EA+ + +M+ +G+ P
Sbjct: 120 SFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFP 179
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
+T+N ++D CK ++++A R+LD M P+ ++TL++G+C RV+ E+F
Sbjct: 180 TTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIF 239
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
M G +Y+ LI+G+C+ +++ A L M+S G+ P+ + + ++ L
Sbjct: 240 CEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSK 299
Query: 334 HQVERAFKLFDEMQRDGV 351
++ +AF + +++Q+ V
Sbjct: 300 KELRKAFAILEDLQKSEV 317
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 145/319 (45%), Gaps = 16/319 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +F L L L+L R+ G P Y +IN CKMG +
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ + + V + ++I LC + + A LFT++ G P+V TY+ +I+ R
Sbjct: 64 LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
+G A L +M V EG V +A+E++ M I P +T
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTIT 183
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S+I GFC + N+AK +L M + P+VVTF+ +++ CK ++D + M
Sbjct: 184 YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 243
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ N Y TL+ GFC G ++ A++L M S G ++ ++ C KE+
Sbjct: 244 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELR 303
Query: 303 GALSLYGEMLSKGIKPDVV 321
A ++ ++ + P +V
Sbjct: 304 KAFAILEDLQKSEVCPRIV 322
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 118/229 (51%), Gaps = 4/229 (1%)
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + PDVVT+T+++ G C +A L+ M+++G QP + I++ LCK G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ A LL M + ++ + +YN ++D C G A+ LF M G V +YS
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+I+ +C++ A L +M+ + I PDVV ++ L L + +V A +++ +M R G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ T TY + IDG CK + +A + ++ C D+ ++ LI+G
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLING 225
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M++ G RP+ + TLM+G C GRV +A L M G H Y +ING CK +
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEG--HQ--PYGTIINGLCKMGD 56
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
E AL+L +M IK VVIYN + L + A LF EM G+ D TY
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
ID C++ +A +L R + + D+ ++ LI+ L
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINAL 156
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/410 (31%), Positives = 197/410 (48%), Gaps = 17/410 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF Y L+ P V ++ L +N++ D +F R+ G P+ TY+ LIN
Sbjct: 224 IFQYDLS-----PDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGL 278
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C GRV +L ++ P T+T I LCA EA L +++ GC PNV
Sbjct: 279 CNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNV 338
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
TY LI+GL R G VA+ L+ +M E V G A ++F
Sbjct: 339 QTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHW 398
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M+ + TY +I+G C D +A L +M+ G P VVT+N +++ G
Sbjct: 399 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 458
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
++ A+RLLDLM + G P+ + YN L+ GF G++ A F M G SY+
Sbjct: 459 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTA 518
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI+G+ K+ +++ ALSL M G P+V YN + L + ++ A K+ D+M G
Sbjct: 519 LIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQG 578
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + TY T IDGLC+N A ++F + KC ++ Y+ LI GL
Sbjct: 579 LLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGL 628
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 130/398 (32%), Positives = 199/398 (50%), Gaps = 20/398 (5%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S N L LAK + + +L+K++ ++G+ P L T+N LIN K G+V ++L +I
Sbjct: 165 SCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQI 224
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ +P+ T+TSLI G C + A +F ++ GC+PN TY+TLINGL G
Sbjct: 225 FQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRV 284
Query: 139 IVALNLFEEMASGNGEFGVEGFV----------------DKAKELFLQMKDENINPDVVT 182
AL++ EEM E G+E V ++A EL +MK P+V T
Sbjct: 285 DEALDMLEEMI----EKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQT 340
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT++I G A L +M+ +G+ PN VT+N +++ELC G+ A ++ M
Sbjct: 341 YTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWME 400
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G N YN ++ G CL G + +A LF M MG TV +Y+ LINGY +
Sbjct: 401 GHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVN 460
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L M G +PD YN L + ++E A F EM G+ + +Y I
Sbjct: 461 NAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALI 520
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
DG K+ + A+ L + + + C ++ +YN +I+GL
Sbjct: 521 DGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGL 558
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 194/401 (48%), Gaps = 22/401 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L L + T L +F + G + TYN +I C G + V+
Sbjct: 371 PNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL 430
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++L+ P VT+ +LI G + + AA L ++ GCEP+ +TYN L++G +
Sbjct: 431 FEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSK 490
Query: 135 TGHTIVALNLFEEMAS---------------GNGEFGVEGFVDKAKELFLQMKDENINPD 179
G A F+EM G+ + +G VD A L +M++ NP+
Sbjct: 491 WGKLESASFYFQEMVECGLNPNPVSYTALIDGHSK---DGKVDIALSLLKRMEEMGCNPN 547
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
V +Y +VI G N ++EA+ + +M++QG+ PNV+T+ ++D LC+NG+ A ++
Sbjct: 548 VESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFH 607
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M + PN + Y++L+ G C G+ + A+ M +GC T+ +YS L++G C+
Sbjct: 608 DMEKRKCLPNLYTYSSLIYGLCQEGKADEAER----MSEIGCEPTLDTYSTLVSGLCRKG 663
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
A L +M +G PD IY +L + + +V+ A K+F ++ G YR
Sbjct: 664 RFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYR 723
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I LCK + EA LF + + D + L+DGL
Sbjct: 724 ALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGL 764
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 125/413 (30%), Positives = 195/413 (47%), Gaps = 19/413 (4%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +FD M+ P V +++ L L D L + + + G+ P +YTY + I
Sbjct: 253 FGVFDRMVKEGCDPNSV-TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPIT 311
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C + ++ R+ + PN T+T+LI GL ++ A L+ K+ G P
Sbjct: 312 ALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVP 371
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG-------------VEGFVDKAKEL 167
N TYN LIN L G AL +F M G+G + G ++KA L
Sbjct: 372 NTVTYNALINELCVGGRFSTALKIFHWM-EGHGSLANTQTYNEIIKGLCLGGDIEKAMVL 430
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
F +M P VVTY ++I G+ + N A LL M + G +P+ T+N ++ K
Sbjct: 431 FEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSK 490
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
GK++ AS M++ G+ PN Y L+DG G+V+ A L ME MGC V S
Sbjct: 491 WGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVES 550
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y+ +ING K A + +M+ +G+ P+V+ Y TL L + + AFK+F +M+
Sbjct: 551 YNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDME 610
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + +TY + I GLC+ EA + + CE + Y+ L+ GL
Sbjct: 611 KRKCLPNLYTYSSLIYGLCQEGKADEAERMSE----IGCEPTLDTYSTLVSGL 659
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 183/386 (47%), Gaps = 28/386 (7%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRS-CFTP 85
+A +K ++V+ F ++ Y +N+ NCF M L R++R F P
Sbjct: 82 VAVHKDTESVIQFFYWISKR----PFYKHNM--NCFISM---------LNRLVRDRVFAP 126
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
+IK E I A ++ G ++++ NTL+ L + A NL+
Sbjct: 127 ADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLY 186
Query: 146 EEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
++M + + +G V +A+ + Q+ +++PDV TYTS+I G C
Sbjct: 187 KQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRN 246
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+ + A + M+ +G PN VT++ +++ LC G++DEA +L+ MI+ G+ P + Y
Sbjct: 247 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTY 306
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
+ C A EL M+ GC V +Y+ LI+G + ++E A+ LY +ML
Sbjct: 307 TLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK 366
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+G+ P+ V YN L L + A K+F M+ G A+T TY I GLC I +
Sbjct: 367 EGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEK 426
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
A+ LF + + + YN LI+G
Sbjct: 427 AMVLFEKMLKMGPLPTVVTYNTLING 452
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 141/299 (47%), Gaps = 15/299 (5%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F M+ +P PV S+ L +K+ D LSL KR+ G P++ +YN +IN
Sbjct: 501 FQEMVECGLNPNPV-SYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLS 559
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K R S + +++ PN +T+T+LI GLC R A +F + C PN++
Sbjct: 560 KENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 619
Query: 124 TYNTLINGLYRTGHTIVA-----------LNLFEEMASGNGEFGVEGFVDKAKELFLQMK 172
TY++LI GL + G A L+ + + SG +G +A++L MK
Sbjct: 620 TYSSLIYGLCQEGKADEAERMSEIGCEPTLDTYSTLVSG---LCRKGRFYEAEQLVKDMK 676
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 232
+ PD Y S++ C + + A + + +G Q ++ + ++ LCK G+++
Sbjct: 677 ERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVE 736
Query: 233 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA L D M++ + V+ L+DG G ++ +L MES T + +Y IL
Sbjct: 737 EAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVIL 795
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 113/272 (41%), Gaps = 51/272 (18%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+N + L+K + + ++ GL P++ TY LI+ C+ GR F +
Sbjct: 546 PNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 605
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + PN T++SLI GLC E + EA ++ GCEP + TY+TL++GL R
Sbjct: 606 FHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAE----RMSEIGCEPTLDTYSTLVSGLCR 661
Query: 135 TG-----------------------------------HTIVALNLFEEMASGNGEFGVE- 158
G AL +F + + + +
Sbjct: 662 KGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSI 721
Query: 159 -----------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
G V++A+ LF M ++ N D + +T ++ G + + LL M
Sbjct: 722 YRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIME 781
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
+ PN+ T+ ++ EL + GK E+ L D
Sbjct: 782 SKNFTPNIQTYVILGRELSRIGKSIESEPLAD 813
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/435 (29%), Positives = 206/435 (47%), Gaps = 51/435 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N++ G L + + D + L + + GL PDLYTY+ILIN FC R ++
Sbjct: 248 PNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLM 307
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P +T+ +LI G + I +A + ++ G E N+ +NTL+NG+ +
Sbjct: 308 LLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCK 367
Query: 135 TGHTIVALNLFEEMASGNGE-------FGVEGF-----VDKAKELFLQMKDENINPDVVT 182
G AL + +EM E +EG + +A EL +MK + P V+T
Sbjct: 368 AGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLT 427
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+ +I G C + +L EM+ G++PN V + +M K G+++E+ +L+ M
Sbjct: 428 YSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMR 487
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ P+ F YN+L+ GFC R+ A+ + M +Y I+GY K E+E
Sbjct: 488 EQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEME 547
Query: 303 GALSLYGEMLSKGIKPDVVIYNTL-------------------------------FVVLF 331
A + EMLS G+ P+V IY L + VL
Sbjct: 548 IADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVL- 606
Query: 332 EIHQVER------AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
IH + R AF +F E+Q G+ + +TY + I G CK + +A +L + I
Sbjct: 607 -IHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG 665
Query: 386 CELDIRAYNCLIDGL 400
DI YN LIDGL
Sbjct: 666 INPDIVTYNILIDGL 680
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 188/393 (47%), Gaps = 14/393 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F + D M R P V +++++ L + + ++ + + GL P+ Y L+
Sbjct: 410 FELLDEM-KKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMT 468
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
K GRV ++L R+ P+ + SLI G C R+ EA ++ P
Sbjct: 469 AHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRP 528
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGN--GEFGV----------EGFVDKAKELF 168
N TY I+G + G +A F EM S G+ EG V +A +F
Sbjct: 529 NAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVF 588
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+ + DV TY+ +I G +EA + E+ ++G+ PN T+N ++ CK
Sbjct: 589 RFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQ 648
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G +D+AS+LL+ M G+ P+ YN L+DG C G + RAK LF +E G T +Y
Sbjct: 649 GNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTY 708
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ +++GYCK+K A L EML +G+ PD IYN + + + E+A LF EM
Sbjct: 709 AAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLE 768
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
G A+ T ++ T I+G CK+ + EA L +
Sbjct: 769 KGFAS-TVSFNTLIEGYCKSGKLQEANHLLEEM 800
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 199/406 (49%), Gaps = 15/406 (3%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+++ P P+ ++N L + + + + + G+ +L +N L+N CK G
Sbjct: 311 MIDVGLKPEPI-TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAG 369
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
++ ++ ++ P++ T++ LI+G C + A L +++ P V TY+
Sbjct: 370 KMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYS 429
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKD 173
+INGL R G+ + EM NG EG V++++ + +M++
Sbjct: 430 VIINGLCRCGNLQGTNAILREMVM-NGLKPNAVVYTTLMTAHAKEGRVEESRMILERMRE 488
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
+ I PDV Y S+I GFC A EA+ L+EM+++ ++PN T+ +D K G+M+
Sbjct: 489 QGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEI 548
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A R + M+ GV PN +Y L++G C G V A +F + S V +YS+LI+
Sbjct: 549 ADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIH 608
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
G +N ++ A ++ E+ KG+ P+ YN+L + V++A +L +EM G+
Sbjct: 609 GLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINP 668
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
D TY IDGLCK I A LF + + Y ++DG
Sbjct: 669 DIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDG 714
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 191/385 (49%), Gaps = 23/385 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S N L G L K + +F + + + PD+YTY +I+ CK+G V V
Sbjct: 178 PSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRV 237
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + +PN VT+ +I GLC + EA L + G P+++TY+ LING
Sbjct: 238 LLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILING--- 294
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
F +E +AK + L+M D + P+ +TY ++I GF
Sbjct: 295 --------------------FCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQG 334
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
D +A + EM+ G++ N++ +N +++ +CK GKM++A ++ M++ GV P++ Y+
Sbjct: 335 DIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYS 394
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L++G C + RA EL M+ TV +YS++ING C+ ++G ++ EM+
Sbjct: 395 LLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMN 454
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+KP+ V+Y TL + +VE + + + M+ G+ D + Y + I G CK + EA
Sbjct: 455 GLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEA 514
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+ + + Y IDG
Sbjct: 515 RTYLMEMLERRLRPNAHTYGAFIDG 539
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/432 (28%), Positives = 195/432 (45%), Gaps = 61/432 (14%)
Query: 6 YMLNM--RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
Y++ M R P ++ +K + F + S G+ P++ Y LI C
Sbjct: 517 YLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHC 576
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K G V+ F V IL + T++ LI GL ++ EA +F++L+ G PN F
Sbjct: 577 KEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAF 636
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
TYN+LI+G + G+ VDKA +L +M + INPD+VTY
Sbjct: 637 TYNSLISGSCKQGN-----------------------VDKASQLLEEMCIKGINPDIVTY 673
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
+I G C A + AK L ++ +G+ PN VT+ ++D CK+ A +LL+ M+
Sbjct: 674 NILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLL 733
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
GV P+AF+YN +++ C + +A +LF M G TV S++ LI GYCK+ +++
Sbjct: 734 RGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQE 792
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLF--------------------------------VVLF 331
A L EM+ K P+ V Y +L +L
Sbjct: 793 ANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLH 852
Query: 332 EIHQV---ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
H + LF+EM G+ D TY ID C+ ++EA +L + + +
Sbjct: 853 GYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPM 912
Query: 389 DIRAYNCLIDGL 400
+ AY+ LI L
Sbjct: 913 SVAAYDALIQAL 924
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 185/413 (44%), Gaps = 18/413 (4%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F ++L+ R V ++++L L++N +F L GL P+ +TYN LI+
Sbjct: 585 FSVFRFILSRR-VLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLIS 643
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK G V +L + P+ VT+ LI GLC I A LF + G P
Sbjct: 644 GSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTP 703
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFV--------------DKAKE 166
N TY +++G ++ + A L EEM + F+ +KA +
Sbjct: 704 NCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG--VPPDAFIYNVILNFCCKEEKFEKALD 761
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
LF +M ++ V++ ++I G+C + EA LL EM+++ PN VT+ ++D C
Sbjct: 762 LFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNC 820
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
K G M EA RL M + V P A Y +L+ G+ G ++ LF M + G
Sbjct: 821 KAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKM 880
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+Y ++I+ YC+ + A L E+L KG+ V Y+ L L + + KL +E+
Sbjct: 881 TYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEI 940
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G T G + EA E+ R++ + + L+DG
Sbjct: 941 GESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 993
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 175/347 (50%), Gaps = 29/347 (8%)
Query: 58 LINCFCKMGRVSHGFVVLGRIL---RSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKL 113
LI C + VLG I+ RSC +PN+V F L+ ++EA +F
Sbjct: 114 LIKCIIR--NSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGP 171
Query: 114 RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKD 173
+ F P++ + N+L+ L + + +F+ M +
Sbjct: 172 KNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCA----------------------- 208
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
+ PDV TYT++I C + +AK +L+EM ++G PN+VT+NVI+ LC+ +DE
Sbjct: 209 HKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDE 268
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A L M+ G+ P+ + Y+ L++GFC+ R AK + + M +G +Y+ LI+
Sbjct: 269 AIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALID 328
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
G+ + +IE A + EM++ GI+ +++I+NTL + + ++E+A ++ EM GV
Sbjct: 329 GFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEP 388
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D+ TY I+G C+ + A EL ++ K + Y+ +I+GL
Sbjct: 389 DSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGL 435
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 140/311 (45%), Gaps = 25/311 (8%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F + + ML +R PP +N++ K + ++ L LF+ + G F ++N LI
Sbjct: 725 FQLLEEML-LRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIE 782
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+CK G++ +L ++ F PN VT+TSLI C + EA L+ +++ P
Sbjct: 783 GYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMP 842
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
TY +L++G + G+ LFEEM + + I PD
Sbjct: 843 TAKTYTSLLHGYHNIGNMSEVSALFEEMVA-----------------------KGIEPDK 879
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+TY +I +C + EA L E++ +G+ +V ++ ++ LCK + E +LL+
Sbjct: 880 MTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNE 939
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+ + G R + + GF + G ++ A E+ SM G S L++G
Sbjct: 940 IGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGAN 999
Query: 301 IEGALSLYGEM 311
E + +L +M
Sbjct: 1000 SEDSDNLLKQM 1010
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 194/397 (48%), Gaps = 15/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ IL + D + L + + S+G + + L+ C GRV
Sbjct: 55 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEH 114
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + C P+ +T+T+L+ LC + EA + ++ GC P+ T++TLI+GL +
Sbjct: 115 FRAMAKDC-APDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCK 173
Query: 135 TGHTIVALNLFEEMAS---GNGEFGVEGFVDK----------AKELFLQMKDENINPDVV 181
G A + E++ GN + E + + A ++ + + P V+
Sbjct: 174 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 233
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+ VI GFC A D + A LL M+++G PNV TF +++ LCK ++ EA +LL+ M
Sbjct: 234 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 293
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G PN Y+T+++G C G+V+ A ELF ME C V +++ILI+G CK K I
Sbjct: 294 VMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRI 353
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV-AADTWTYRT 360
E A LY M G PD++ YN+L L + QV+ AF+LF + GV AA+ TY T
Sbjct: 354 EEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYST 413
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
G + +A +F L D+ Y LI
Sbjct: 414 LFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLI 450
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 164/326 (50%), Gaps = 24/326 (7%)
Query: 45 STGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 104
+ G P + +N++IN FCK + + +L ++ PN TFT LI GLC +R+
Sbjct: 225 AKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVG 284
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKA 164
EA L K+ + GC PNV TY+T+INGL + G VD A
Sbjct: 285 EAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQ-----------------------VDDA 321
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
ELF M+ N P+VVT+ +I G C A EA+ L M + G P+++T+N ++D
Sbjct: 322 YELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDG 381
Query: 225 LCKNGKMDEASRLLDLMIQIGVRP-NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
LCK+ ++DEA +L + + GV NA Y+TL G+ GR+ A +F + G +
Sbjct: 382 LCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSP 441
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
+ +Y+ LI YCK + L EM SKG P V + + LFE + ERA +LF
Sbjct: 442 DLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLF 501
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNS 369
D M G D Y ++G+ + S
Sbjct: 502 DSMAARGCTDDALIYNLVVEGMARAS 527
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 118/352 (33%), Positives = 170/352 (48%), Gaps = 49/352 (13%)
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG 156
LC +R EA ALF C PN FTY LI G G +A+ L EEM S E
Sbjct: 32 LCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGN 91
Query: 157 V------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
G V +A E F M ++ PDV+TYT+++ C A ++EA+ +L
Sbjct: 92 AVVHTTLMKGLCDAGRVVEALEHFRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLR 150
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV------------------ 246
EM+ QG P+ VTF+ ++D LCK G ++A R+L+ +IQ G+
Sbjct: 151 EMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKY 210
Query: 247 ------------------RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
P ++N +++GFC ++ A +L M GC VF++
Sbjct: 211 NSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTF 270
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ILI G CK + A L +M+ G P+VV Y+T+ L + QV+ A++LF M+R
Sbjct: 271 TILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMER 330
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ T+ IDGLCK I EA +L+ +R C DI YN LIDGL
Sbjct: 331 RNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGL 382
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 183/401 (45%), Gaps = 16/401 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +F IL L K L +++ G P++ TY+ +IN CK G+V + +
Sbjct: 265 PNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYEL 324
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R PN VT LI GLC RI EA L+ ++R GC P++ TYN+LI+GL +
Sbjct: 325 FQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCK 384
Query: 135 TGHTIVALNLFEEM-----ASGNG--------EFGVEGFVDKAKELFLQMKDENINPDVV 181
+ A LF+ + ++ N + G + A +F + D+ +PD+
Sbjct: 385 SFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLA 444
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYTS+I +C + E L+ EM +G P V T + ++ L + + A +L D M
Sbjct: 445 TYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSM 504
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAK---ELFVSMESMGCTHTVFSYSILINGYCKN 298
G +A +YN +++G + ++A E + + + L+ C+
Sbjct: 505 AARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQV 564
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+ + A L +M +G V YN L L + + + A ++F+ M G A + T
Sbjct: 565 GKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTV 624
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I LC + + +A EL + + L C DI N LI G
Sbjct: 625 NVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGG 665
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 163/371 (43%), Gaps = 51/371 (13%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++ R PP V + NIL L K K + L+ R+ TG PD+ TYN LI+ CK
Sbjct: 327 LMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSF 386
Query: 67 RVS--------------------------HGFVVLGRILRSC----------FTPNAVTF 90
+V HG+ LGR+ +C F+P+ T+
Sbjct: 387 QVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATY 446
Query: 91 TSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS 150
TSLI C SR +E L ++ G P V T + ++ GL+ HT A+ LF+ MA+
Sbjct: 447 TSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAA 506
Query: 151 GNG-------EFGVEGFVDKAK--------ELFLQMKDENINPDVVTYTSVIRGFCYAND 195
VEG +K E + +D NP +++ C
Sbjct: 507 RGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGK 566
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
++AK LL +M ++G V ++N ++ L + + DEA+++ + M+ G P N
Sbjct: 567 TDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNV 626
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
++ C +V+ A EL M +GC + + + LI GYCK+ + A L EM G
Sbjct: 627 VISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAG 686
Query: 316 IKPDVVIYNTL 326
++P+ ++ L
Sbjct: 687 LEPNDTTHDLL 697
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 1/207 (0%)
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
LF + +V + + C N EA L M + PN T+ +++
Sbjct: 9 LFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFS 68
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
G +D A +LL+ M G NA V+ TLM G C GRV A E F +M + C V
Sbjct: 69 SAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVM 127
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+Y+ L++ CK + + A + EM+++G PD V ++TL L + E+AF++ +++
Sbjct: 128 TYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDV 187
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVE 373
+ G+ + T I LC VE
Sbjct: 188 IQRGMGNSDAAFETIIQRLCNKYNSVE 214
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
H VFS + ++ C+ + AL+L+ +++ P+ Y L ++ A +L
Sbjct: 20 HNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQL 79
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+EM+ G + + T + GLC +VEA+E FR + C D+ Y L+ L
Sbjct: 80 LEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTALVHAL 136
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 131/410 (31%), Positives = 197/410 (48%), Gaps = 17/410 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF Y L+ P V ++ L +N++ D +F R+ G P+ TY+ LIN
Sbjct: 224 IFQYDLS-----PDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGL 278
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C GRV +L ++ P T+T I LCA EA L +++ GC PNV
Sbjct: 279 CNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNV 338
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
TY LI+GL R G VA+ L+ +M E V G A ++F
Sbjct: 339 QTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHW 398
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M+ + TY +I+G C D +A L +M+ G P VVT+N +++ G
Sbjct: 399 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 458
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
++ A+RLLDLM + G P+ + YN L+ GF G++ A F M G SY+
Sbjct: 459 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTA 518
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI+G+ K+ +++ ALSL M G P+V YN + L + ++ A K+ D+M G
Sbjct: 519 LIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQG 578
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + TY T IDGLC+N A ++F + KC ++ Y+ LI GL
Sbjct: 579 LLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGL 628
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 128/394 (32%), Positives = 197/394 (50%), Gaps = 12/394 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S N L LAK + + +L+K++ ++G+ P L T+N LIN K G+V ++L +I
Sbjct: 165 SCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQI 224
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ +P+ T+TSLI G C + A +F ++ GC+PN TY+TLINGL G
Sbjct: 225 FQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRV 284
Query: 139 IVALNLFEEMASGNGEFGVEGFV------------DKAKELFLQMKDENINPDVVTYTSV 186
AL++ EEM E V + ++A EL +MK P+V TYT++
Sbjct: 285 DEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTAL 344
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G A L +M+ +G+ PN VT+N +++ELC G+ A ++ M G
Sbjct: 345 ISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGS 404
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
N YN ++ G CL G + +A LF M MG TV +Y+ LINGY + A
Sbjct: 405 LANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAAR 464
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L M G +PD YN L + ++E A F EM G+ + +Y IDG
Sbjct: 465 LLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHS 524
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
K+ + A+ L + + + C ++ +YN +I+GL
Sbjct: 525 KDGKVDIALSLLKRMEEMGCNPNVESYNAVINGL 558
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 193/412 (46%), Gaps = 15/412 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +FD M+ P V +++ L L D L + + + G+ P +YTY + I
Sbjct: 253 FGVFDRMVKEGCDPNSV-TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPIT 311
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C + ++ R+ + PN T+T+LI GL ++ A L+ K+ G P
Sbjct: 312 ALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVP 371
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG-------------VEGFVDKAKEL 167
N TYN LIN L G AL +F M G+G + G ++KA L
Sbjct: 372 NTVTYNALINELCVGGRFSTALKIFHWM-EGHGSLANTQTYNEIIKGLCLGGDIEKAMVL 430
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
F +M P VVTY ++I G+ + N A LL M + G +P+ T+N ++ K
Sbjct: 431 FEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSK 490
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
GK++ AS M++ G+ PN Y L+DG G+V+ A L ME MGC V S
Sbjct: 491 WGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVES 550
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y+ +ING K A + +M+ +G+ P+V+ Y TL L + + AFK+F +M+
Sbjct: 551 YNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDME 610
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + +TY + I GLC+ EA L + + D + LIDG
Sbjct: 611 KRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDG 662
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 178/378 (47%), Gaps = 12/378 (3%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P V ++ L L++ + + L+ ++ GL P+ TYN LIN C GR
Sbjct: 329 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 388
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
S + + N T+ +IKGLC I +A LF K+ G P V TYNT
Sbjct: 389 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT 448
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDEN 175
LING G+ A L + M E F G ++ A F +M +
Sbjct: 449 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG 508
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+NP+ V+YT++I G + A LL M + G PNV ++N +++ L K + EA
Sbjct: 509 LNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAE 568
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
++ D M++ G+ PN Y TL+DG C GR A ++F ME C +++YS LI G
Sbjct: 569 KICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGL 628
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
C+ + + A L EM KG+ PD V + +L + +++ AF L M G +
Sbjct: 629 CQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNY 688
Query: 356 WTYRTFIDGLCKNSYIVE 373
TY + GL K ++E
Sbjct: 689 RTYSVLLKGLQKECLLLE 706
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 183/386 (47%), Gaps = 28/386 (7%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRS-CFTP 85
+A +K ++V+ F ++ Y +N+ NCF M L R++R F P
Sbjct: 82 VAVHKDTESVIQFFYWISKR----PFYKHNM--NCFISM---------LNRLVRDRVFAP 126
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
+IK E I A ++ G ++++ NTL+ L + A NL+
Sbjct: 127 ADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLY 186
Query: 146 EEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
++M + + +G V +A+ + Q+ +++PDV TYTS+I G C
Sbjct: 187 KQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRN 246
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+ + A + M+ +G PN VT++ +++ LC G++DEA +L+ MI+ G+ P + Y
Sbjct: 247 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTY 306
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
+ C A EL M+ GC V +Y+ LI+G + ++E A+ LY +ML
Sbjct: 307 TLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK 366
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+G+ P+ V YN L L + A K+F M+ G A+T TY I GLC I +
Sbjct: 367 EGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEK 426
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
A+ LF + + + YN LI+G
Sbjct: 427 AMVLFEKMLKMGPLPTVVTYNTLING 452
>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 712
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 195/399 (48%), Gaps = 25/399 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD ML+ R P S+ ++ + V K + G D T ++I+ F
Sbjct: 215 VFDEMLD-RAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTF 273
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
+ G V+ F + ++ PN + F+SLI GLC I +A + ++ G +PNV
Sbjct: 274 SEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNV 333
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQM-KDENINPDVV 181
+T+ LI+GL + +G+ +KA LFL++ + +N P+V
Sbjct: 334 YTHTALIDGLCK-----------------------KGWTEKAFRLFLKLVRSDNYKPNVY 370
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT +I G+C N A+ LLI M +QG+ PN T+ ++D CK G A L+DLM
Sbjct: 371 TYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLM 430
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G PN F YN ++DG C GR A +L G +Y+ILI+ +C+ +
Sbjct: 431 GKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDN 490
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ AL+++ M G++PD+ YN L +VE + KLF+E G+ TY +
Sbjct: 491 KQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSM 550
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I G C++ +I A++ F +R C+ D Y LI GL
Sbjct: 551 ICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGL 589
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 173/343 (50%), Gaps = 24/343 (6%)
Query: 40 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
FK+ GL P+L ++ LIN CK+G + F +L ++R + PN T T+LI GLC
Sbjct: 286 FKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCK 345
Query: 100 ESRIMEAAALFTKL-RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE 158
+ +A LF KL R +PNV+TY +ING + E
Sbjct: 346 KGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCK-----------------------E 382
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
+++A+ L ++MK++ + P+ TYT +I G C A ++ A L+ M +G PN+ T+
Sbjct: 383 EKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTY 442
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
N I+D LCK G+ EA +LL ++ G+ + Y L+ FC +A +F M
Sbjct: 443 NAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFK 502
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
+G + +Y++LI +C+ K++E + L+ E + G+ P Y ++ +
Sbjct: 503 VGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISS 562
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
A K F +M+ G D+ TY I GLC S + EA +L+ T+
Sbjct: 563 AIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETM 605
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 121/243 (49%), Gaps = 1/243 (0%)
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
GFVD A+++F +M D + PD +Y ++ G+C ++ L +M+++G + T
Sbjct: 207 GFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATC 266
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
+++ + G ++ A +Q+G+ PN +++L++G C G + +A E+ M
Sbjct: 267 TLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVR 326
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEML-SKGIKPDVVIYNTLFVVLFEIHQVE 337
G V++++ LI+G CK E A L+ +++ S KP+V Y + + ++
Sbjct: 327 KGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLN 386
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
RA L M+ G+ +T TY IDG CK A EL + +I YN +I
Sbjct: 387 RAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAII 446
Query: 398 DGL 400
DGL
Sbjct: 447 DGL 449
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 137/289 (47%), Gaps = 16/289 (5%)
Query: 120 PNVFTYN---TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQ-----M 171
PN T+ T++ L + ++V+L+ F N G F + L++ +
Sbjct: 97 PNSLTHEQVITVVASLAQEAGSVVSLSFF------NWVIGFSKFRHFMR-LYIVCATTFL 149
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
++N++ ++R F EA ++IEM + G+ N ++D G +
Sbjct: 150 NNDNLDRATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFV 209
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
D A ++ D M+ V P++ Y ++ G+C GR++ M G + +++
Sbjct: 210 DYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLM 269
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I+ + + + A + + + G+ P+++ +++L L +I +++AF++ +EM R G
Sbjct: 270 ISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGW 329
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELF-RTLRILKCELDIRAYNCLIDG 399
+ +T+ IDGLCK + +A LF + +R + ++ Y C+I+G
Sbjct: 330 KPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMING 378
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 30/225 (13%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ IL + L++F R+ GL PD++TYN+LI FC+ +V +
Sbjct: 476 TYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEA 535
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ P T+TS+I G C + I A F K+R +GC+P+ TY LI+GL
Sbjct: 536 VGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCN---- 591
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
E +D+A +L+ M D ++P VT ++ +C D
Sbjct: 592 -------------------ESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSAT 632
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS----RLLD 239
A +++E +++ + + T N ++ +LC K+ A+ +LLD
Sbjct: 633 A-MIILERLEKKLW--IRTVNTLIRKLCSEKKVGVAALFFHKLLD 674
>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 323
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 175/310 (56%), Gaps = 16/310 (5%)
Query: 85 PNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNL 144
P+ VTFT+L+ GLC E R+++A AL ++ G +P Y T+INGL + G T ALNL
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63
Query: 145 FEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+M + + V +G A+ LF +M D+ I PDV+TY+ +I FC
Sbjct: 64 LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
+ W +A+ LL +M+++ + P+VVTF+ +++ L K GK+ EA + M++ G+ P
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTIT 183
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
YN+++DGFC R+N AK + SM S C+ V ++S LINGYCK K ++ + ++ EM
Sbjct: 184 YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 243
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
+GI + V Y TL ++ ++ A L + M GVA + T+++ + LC +
Sbjct: 244 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELR 303
Query: 373 EAVELFRTLR 382
+A + L+
Sbjct: 304 KAFAILEDLQ 313
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 159/315 (50%), Gaps = 16/315 (5%)
Query: 46 TGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME 105
TG PD+ T+ L+N C GRV ++ R++ P + ++I GLC
Sbjct: 4 TGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTES 59
Query: 106 AAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------G 153
A L +K+ + +V YN +I+ L + GH I A NLF EM
Sbjct: 60 ALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMID 119
Query: 154 EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
F G A++L M + INPDVVT++++I +EA+ + +M+ +G+ P
Sbjct: 120 SFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFP 179
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
+T+N ++D CK ++++A R+LD M P+ ++TL++G+C RV+ E+F
Sbjct: 180 TTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIF 239
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
M G +Y+ LI+G+C+ +++ A L M+S G+ P+ + + ++ L
Sbjct: 240 CEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSK 299
Query: 334 HQVERAFKLFDEMQR 348
++ +AF + +++Q+
Sbjct: 300 KELRKAFAILEDLQK 314
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 125/250 (50%), Gaps = 23/250 (9%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+N + L K+ H+ +LF ++ G+FPD+ TY+ +I+ FC+ GR + +L ++
Sbjct: 79 YNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMI 138
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
P+ VTF++LI L E ++ EA ++ + G P TYN++I+G
Sbjct: 139 ERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDG-------- 190
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
F + ++ AK + M ++ +PDVVT++++I G+C A +
Sbjct: 191 ---------------FCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
+ EM +G+ N VT+ ++ C+ G +D A LL++MI GV PN + +++
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLAS 295
Query: 260 FCLTGRVNRA 269
C + +A
Sbjct: 296 LCSKKELRKA 305
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 118/229 (51%), Gaps = 4/229 (1%)
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + PDVVT+T+++ G C +A L+ M+++G QP + I++ LCK G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ A LL M + ++ + +YN ++D C G A+ LF M G V +YS
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+I+ +C++ A L +M+ + I PDVV ++ L L + +V A +++ +M R G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ T TY + IDG CK + +A + ++ C D+ ++ LI+G
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLING 225
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 131/292 (44%), Gaps = 23/292 (7%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+ + L K ++ L+L ++ T + + YN +I+ CK G H + +
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
P+ +T++ +I C R +A L + P+V T++ LIN L +
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVK----- 158
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
EG V +A+E++ M I P +TY S+I GFC + N+A
Sbjct: 159 ------------------EGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDA 200
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
K +L M + P+VVTF+ +++ CK ++D + M + G+ N Y TL+ G
Sbjct: 201 KRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 260
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
FC G ++ A++L M S G ++ ++ C KE+ A ++ ++
Sbjct: 261 FCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 77/160 (48%), Gaps = 4/160 (2%)
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M++ G RP+ + TLM+G C GRV +A L M G Y +ING CK +
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ----PYGTIINGLCKMGD 56
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
E AL+L +M IK VVIYN + L + A LF EM G+ D TY
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
ID C++ +A +L R + + D+ ++ LI+ L
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINAL 156
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 23/196 (11%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V +F+ L L K ++ + G+FP TYN +I+ FCK R++
Sbjct: 140 RQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLND 199
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+L + +P+ VTF++LI G C R+ +F ++ G N TY TLI+
Sbjct: 200 AKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIH 259
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
G + G +D A++L M + P+ +T+ S++
Sbjct: 260 GFCQVGD-----------------------LDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Query: 191 CYANDWNEAKCLLIEM 206
C + +A +L ++
Sbjct: 297 CSKKELRKAFAILEDL 312
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 58/140 (41%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N + K + + + S PD+ T++ LIN +CK RV +G +
Sbjct: 179 PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEI 238
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R N VT+T+LI G C + A L + G PN T+ +++ L
Sbjct: 239 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCS 298
Query: 135 TGHTIVALNLFEEMASGNGE 154
A + E++ G
Sbjct: 299 KKELRKAFAILEDLQKSEGH 318
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 121/396 (30%), Positives = 189/396 (47%), Gaps = 12/396 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +FNI+ L K + + G+ P++ TYN +I+ +C GRV +VL
Sbjct: 236 VYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLD 295
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ P++ T+ SLI G+C ++ EA+ + K++ G P TYNTLI+G G
Sbjct: 296 IMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKG 355
Query: 137 HTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
+ A +EM +EG +D+A + M D I PD +TY
Sbjct: 356 DLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYN 415
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+I G+C + +A L EM+ +G+QP +VT+ ++ L K +M A L + +I+
Sbjct: 416 ILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIRE 475
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G P+ ++N L+DG C G ++RA L M+ +Y+ L+ G C+ ++E A
Sbjct: 476 GASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEA 535
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L EM +GI+PD + YNTL + + AF + DEM G TY I G
Sbjct: 536 RELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQG 595
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LCKN A EL + + D Y LI+G+
Sbjct: 596 LCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGI 631
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 175/363 (48%), Gaps = 47/363 (12%)
Query: 84 TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALN 143
T +++ F LI+ C R +A F ++ G P + T+N +++ + T
Sbjct: 163 TKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWV 222
Query: 144 LFEEM-----ASGNGEFGV-------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
L+ EM S F + EG + KAK+ M++ + P+VVTY +VI G+C
Sbjct: 223 LYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYC 282
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
A+ +L M ++GV+P+ T+ ++ +CK GK++EAS +L+ M +IG+ P A
Sbjct: 283 SRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAV 342
Query: 252 VYNTLMDGFC-----------------------------------LTGRVNRAKELFVSM 276
YNTL+DG+C L G+++ A + M
Sbjct: 343 TYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDM 402
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
G +Y+ILINGYC+ + A +L+ EM+SKGI+P +V Y +L VL + +++
Sbjct: 403 GDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRM 462
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
+ A LF+++ R+G + D + IDG C N + A L + + D YN L
Sbjct: 463 KAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTL 522
Query: 397 IDG 399
+ G
Sbjct: 523 MQG 525
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 120/272 (44%), Gaps = 50/272 (18%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N+L L D + K + +G+ PD TYNILIN +C+ G F +
Sbjct: 374 PTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNL 433
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ P VT+TSLI L +R+ A LF K+ G P++ +N LI+G
Sbjct: 434 HDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCA 493
Query: 135 TGHTIVALNLFEEMASGN---GEFGV---------EGFVDKAKELFLQMKDENINPD--- 179
G+ A L +EM N E EG V++A+EL +MK I PD
Sbjct: 494 NGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHIS 553
Query: 180 --------------------------------VVTYTSVIRGFCYANDWNEAKCLLIEMM 207
++TY ++I+G C + A+ LL EM+
Sbjct: 554 YNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMV 613
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
+G+ P+ T+ +++ + GK+D++S D
Sbjct: 614 SKGITPDDSTYFSLIEGI---GKVDDSSEASD 642
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 122/248 (49%), Gaps = 5/248 (2%)
Query: 157 VEGFVDKAKELFLQM---KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
+E V K++F ++ +D + + +IR C ++A M ++GV P
Sbjct: 140 IESRVAGVKDVFHELAITRDRLGTKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVP 199
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
+ TFN ++ K + + L M ++ ++ + +N +++ C G++ +AK+
Sbjct: 200 KIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFI 259
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
SME++G V +Y+ +I+GYC +EGA + M ++G++PD Y +L + +
Sbjct: 260 GSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKG 319
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD-IRA 392
++E A + ++M+ G+ TY T IDG C +V+A +R + + L +
Sbjct: 320 GKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFG-YRDEMVRRAILPTVST 378
Query: 393 YNCLIDGL 400
YN LI L
Sbjct: 379 YNLLIHAL 386
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 205/409 (50%), Gaps = 16/409 (3%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
+++N P V ++ G L +K D + + L + G PDL YN +I FC+
Sbjct: 82 HLVNKGHKPDVVLCTKLIHG-LFTSKTIDKAIQVMHILENHG-HPDLIAYNAIITGFCRA 139
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
R+ + VL R+ F+P+ VT+ LI LC+ + A +L C+P V TY
Sbjct: 140 NRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTY 199
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKD 173
LI G A+ L +EM N + + EG+VD+A ++ +
Sbjct: 200 TILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISS 259
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
+ PDV+TY ++RG W L+ +M+ +G + NVVT++V++ +C++GK++E
Sbjct: 260 KGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEE 319
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
LL M + G++P+ + Y+ L+ C GRV+ A E+ M S GC + +Y+ ++
Sbjct: 320 GVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILA 379
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
CK K + ALS++ ++ G P+ YN++F L+ RA + EM GV
Sbjct: 380 CLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDP 439
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRI--LKCELDIRAYNCLIDGL 400
D TY + I LC++ + EA+EL + + +C+ + +YN ++ GL
Sbjct: 440 DGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGL 488
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 171/372 (45%), Gaps = 24/372 (6%)
Query: 29 KNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 88
K +++ L + L + G PD+ LI+ + V+ IL + P+ +
Sbjct: 69 KAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVM-HILENHGHPDLI 127
Query: 89 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM 148
+ ++I G C +RI A + +++ G P++ TYN LI
Sbjct: 128 AYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILI------------------- 168
Query: 149 ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD 208
G G +D A E Q+ EN P VVTYT +I +EA LL EM++
Sbjct: 169 ----GSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLE 224
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
+QP++ T+N I+ +C+ G +D A +++ + G P+ YN L+ G G+
Sbjct: 225 INLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEA 284
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
EL M + GC V +YS+LI+ C++ ++E + L +M KG+KPD Y+ L
Sbjct: 285 GYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIA 344
Query: 329 VLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
L + +V+ A ++ D M DG D Y T + LCK EA+ +F L + C
Sbjct: 345 ALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSP 404
Query: 389 DIRAYNCLIDGL 400
+ +YN + L
Sbjct: 405 NASSYNSMFSAL 416
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 176/395 (44%), Gaps = 15/395 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ + D M N + P + ++NIL G L D+ L +L P + TY ILI
Sbjct: 146 YQVLDRMKN-KGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIE 204
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
G + +L +L P+ T+ S+I+G+C E + A + + + G P
Sbjct: 205 ATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAP 264
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELF 168
+V TYN L+ GL G L +M + E V +G V++ L
Sbjct: 265 DVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLL 324
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
MK + + PD Y +I C + A +L M+ G P++V +N I+ LCK
Sbjct: 325 KDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQ 384
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
+ DEA + + + ++G PNA YN++ TG RA + + M G +Y
Sbjct: 385 KRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITY 444
Query: 289 SILINGYCKNKEIEGALSLY--GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+ LI+ C++ ++ A+ L EM S KP VV YN + + L ++ +V A ++ M
Sbjct: 445 NSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAM 504
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
G + TY I+G+ + +A +L TL
Sbjct: 505 VDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTL 539
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 142/283 (50%), Gaps = 26/283 (9%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++++L + ++ + + L K + GL PD Y Y+ LI CK GRV VL
Sbjct: 301 VVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLD 360
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ P+ V + +++ LC + R EA ++F KL GC PN +YN++ + L+ TG
Sbjct: 361 VMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTG 420
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
H + AL + L+M D+ ++PD +TY S+I C
Sbjct: 421 HKVRALGMI-----------------------LEMLDKGVDPDGITYNSLISCLCRDGMV 457
Query: 197 NEAKCLLI--EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+EA LL+ EM +P+VV++N+++ LCK ++ +A +L M+ G RPN Y
Sbjct: 458 DEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYT 517
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
L++G G +N A++L ++ +M + S+ L +CK
Sbjct: 518 FLIEGIGFGGCLNDARDLATTLVNMDAI-SEHSFERLYKTFCK 559
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 123/394 (31%), Positives = 193/394 (48%), Gaps = 29/394 (7%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
S P + +++ L K + L K + S GL PD Y ++ CK R+
Sbjct: 78 STPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEAL 137
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+L ++R+ P +TF +LI G C E + A +L K+ G + +V TYNTL++GL
Sbjct: 138 ELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGL 197
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ G + +A++L +MK PDVV Y+S + G C
Sbjct: 198 CKAGR-----------------------LQEAEQLLERMKASGCAPDVVAYSSFVYGLCK 234
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI-GVRPNAF 251
+ +A +L +M D PNVVT+N I+D LCK+GK+D A +++ M G N
Sbjct: 235 SGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVV 294
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
Y+T++DG C GR A+ + +M GC V +YS L+NG CK +IE A+ EM
Sbjct: 295 GYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREM 354
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV-----AADTWTYRTFIDGLC 366
+G KP+ V Y +L L ++ A ++ +EM G TY I GLC
Sbjct: 355 AMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLC 414
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
K I +A++ F+ +R C+ D +Y+ +++GL
Sbjct: 415 KAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGL 448
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 174/338 (51%), Gaps = 27/338 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +FN L + K+ + SL +++ ++G+ D+ TYN L++ CK GR+ +
Sbjct: 150 PTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQL 209
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R+ S P+ V ++S + GLC ++++A + ++R +PNV TYNT+++GL +
Sbjct: 210 LERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCK 269
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+G AL + E+MAS +G +VV Y++V+ G C
Sbjct: 270 SGKIDTALEMMEQMASSDG----------------------CGLNVVGYSTVVDGLCKLG 307
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EA+ ++ M G +P+VVT++ +++ LCK GK++EA + M G +PNA Y
Sbjct: 308 RTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYC 367
Query: 255 TLMDGFCLTGRVNRAKELFVSM-----ESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
+L+ G C GR+ A+ + M C +V +Y+ LI G CK I+ AL +
Sbjct: 368 SLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQ 427
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
M S+G PD V Y+T+ L + +A + E++
Sbjct: 428 RMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 175/361 (48%), Gaps = 26/361 (7%)
Query: 43 LNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 102
++ TG P+ T+N L+N F K GR +L + PN V++ L++GLC R
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 103 IMEAAALFTKLRVFG--CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF 160
EA L + G P++ TY+TL++G + G
Sbjct: 61 WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGK----------------------- 97
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
V++++EL ++ + PD + YT V+ C + EA LL EM+ G P ++TFN
Sbjct: 98 VEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNT 157
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
++ C+ ++ A LL M GV+ + YNTLMDG C GR+ A++L M++ G
Sbjct: 158 LISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASG 217
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
C V +YS + G CK+ ++ A + +M P+VV YNT+ L + +++ A
Sbjct: 218 CAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTAL 277
Query: 341 KLFDEM-QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
++ ++M DG + Y T +DGLCK EA + + C D+ Y+ L++G
Sbjct: 278 EMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNG 337
Query: 400 L 400
L
Sbjct: 338 L 338
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP V ++N L G L K D L F+R+ S G PD +Y+ ++ + GR +
Sbjct: 400 PPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEM 459
Query: 74 VLGRI 78
+L +
Sbjct: 460 ILSEV 464
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 194/386 (50%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S N L+K D F+ + G+ P ++TYNI+I CK G + +
Sbjct: 95 PKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSL 154
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ + TP+ VT+ +LI G + E+ LF +++ GCEP+V TYN LIN +
Sbjct: 155 FEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCK 214
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
F+ M +A E F +MKD+++ P+V++Y+++I C
Sbjct: 215 ----------FKGML-------------RAFEFFREMKDKDLKPNVISYSTLIDALCKEG 251
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
A ++M G+ PN T++ ++D CK G + EA L D M+Q V N Y
Sbjct: 252 MMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYT 311
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+DG C G +N A+ELF +M G T + +Y+ LI+G+ K + ++ A+ L+ EM K
Sbjct: 312 TLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREK 371
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
IKPD++++ T+ L ++E + EM+ G+ A+ Y T +D K EA
Sbjct: 372 DIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEA 431
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ L +R L E+ + + LIDGL
Sbjct: 432 INLLEEMRDLGTEVTVVTFCALIDGL 457
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 198/410 (48%), Gaps = 13/410 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ M M +P + ++N L K D + LF+ + G PD+ TYN LIN F
Sbjct: 154 LFEQMKKMGLTPD-IVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSF 212
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK + F + PN +++++LI LC E + A F + G PN
Sbjct: 213 CKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNE 272
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
FTY++LI+ + G+ A L +EM + + + EG +++A+ELF
Sbjct: 273 FTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRA 332
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + P++ YT++I G ++A L EM ++ ++P+++ + I+ LC K
Sbjct: 333 MGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESK 392
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
++E ++ M + G+ N +Y TLMD + G A L M +G TV ++
Sbjct: 393 LEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCA 452
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI+G CK ++ A+ +G M ++P+V +Y L L + + + A KLFDEMQ
Sbjct: 453 LIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKN 512
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ D Y IDG K+ EA+ + + + ELD+ AY L+ GL
Sbjct: 513 MIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGL 562
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 187/392 (47%), Gaps = 22/392 (5%)
Query: 4 FDYMLNMRPS--PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
F++ M+ P V S++ L L K + F + GL P+ +TY+ LI+
Sbjct: 222 FEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDA 281
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK G + F++ +L+ N VT+T+L+ GLC E + EA LF + G PN
Sbjct: 282 NCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPN 341
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMAS----------GNGEFGV--EGFVDKAKELFL 169
+ Y LI+G + A+ LF EM G +G+ E +++ K +
Sbjct: 342 LQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMT 401
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+MK+ I + V YT+++ + A + EA LL EM D G + VVTF ++D LCK G
Sbjct: 402 EMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRG 461
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+ EA M ++PN VY L+DG C + AK+LF M+ +Y+
Sbjct: 462 LVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYT 521
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
+I+G K+ + AL++ +M+ GI+ D+ Y +L L + QV++A K EM
Sbjct: 522 AMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGK 581
Query: 350 GVAADTWTYRTFIDGLCKNSY----IVEAVEL 377
G+ D T L + Y I EA+EL
Sbjct: 582 GIIPD----ETLCTRLLRKHYELGNIDEAIEL 609
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 129/242 (53%)
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
G ++ A + FL+M + P + + + A + + ++ +M+ G+ P V T+
Sbjct: 76 GMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTY 135
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
N+++ +CK G M A L + M ++G+ P+ YNTL+DG+ G ++ + LF M+
Sbjct: 136 NIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKF 195
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
MGC V +Y+ LIN +CK K + A + EM K +KP+V+ Y+TL L + ++
Sbjct: 196 MGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQM 255
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A K F +M R G+ + +TY + ID CK + EA L + +L+I Y L+D
Sbjct: 256 AIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLD 315
Query: 399 GL 400
GL
Sbjct: 316 GL 317
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 133/314 (42%), Gaps = 47/314 (14%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ ++ L L + + LF+ + G+ P+L Y LI+ K+ + +
Sbjct: 307 IVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFN 366
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ P+ + + +++ GLC+ES++ E + T+++ G N Y TL++ ++ G
Sbjct: 367 EMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAG 426
Query: 137 HTIVALNLFEEMASGNGEFGVEGF------------------------------------ 160
+ A+NL EEM E V F
Sbjct: 427 NRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYT 486
Query: 161 -----------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
+ AK+LF +M+D+N+ PD + YT++I G ++ EA + +MM+
Sbjct: 487 ALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEM 546
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
G++ ++ + ++ L + G++ +A + L MI G+ P+ + L+ G ++ A
Sbjct: 547 GIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEA 606
Query: 270 KELFVSMESMGCTH 283
EL + G H
Sbjct: 607 IELQNELVEKGLIH 620
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%)
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
P F+ + L + G ++ A + M + V P A N + G + +++
Sbjct: 60 PGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDF 119
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
F M G TVF+Y+I+I CK ++ A SL+ +M G+ PD+V YNTL +
Sbjct: 120 FRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGK 179
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
I ++ + LF+EM+ G D TY I+ CK ++ A E FR ++ + ++ +
Sbjct: 180 IGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVIS 239
Query: 393 YNCLIDGL 400
Y+ LID L
Sbjct: 240 YSTLIDAL 247
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 193/391 (49%), Gaps = 18/391 (4%)
Query: 8 LNMRPSP---PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCK 64
+++ P P P S+ +L L ++ D + L + + S G+ D+ TY LI C
Sbjct: 103 MSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCD 162
Query: 65 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFT 124
V ++G + S PN V ++SL++G C R + +F ++ G EP+V
Sbjct: 163 AAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVM 222
Query: 125 YNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMK 172
Y LI+ L + G A + + M E V EG V +A + +M
Sbjct: 223 YTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMS 282
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG--VQPNVVTFNVIMDELCKNGK 230
++ + PDVVTY ++I+G + +EA LL EM+ V+PNVVTFN ++ LC G+
Sbjct: 283 EKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGR 342
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
M +A ++ +M + G N YN L+ G +V +A EL M S+G F+YSI
Sbjct: 343 MRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSI 402
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI G+CK +++ A L M +GI+P++ Y L V + E +ERA LF+EM +
Sbjct: 403 LIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMD-NN 461
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
D Y T I G CK + A EL +++
Sbjct: 462 FPLDVVAYSTMIHGACKAGDLKTAKELLKSI 492
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 171/376 (45%), Gaps = 71/376 (18%)
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRILRS-------CFTPNAVTFTSLIKGLCAESRI 103
D +YN ++ C+ G G +LR+ PNAV++T L++ LCA+
Sbjct: 76 DAVSYNTVLTALCRRGHHDRA----GALLRAMSLEPHPACRPNAVSYTVLMRALCADRLA 131
Query: 104 MEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDK 163
+A L +R G +V TY TLI GL VDK
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAE-----------------------VDK 168
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
A EL +M + I P+VV Y+S+++G+C + W + + +EM ++G++P+VV + ++D
Sbjct: 169 AVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLID 228
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
LCK GK +A ++D+M++ G+ PN YN L++ C G V A + M G
Sbjct: 229 SLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAP 288
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKG--IKPDVVI------------------- 322
V +Y+ LI G E++ A+ L EM+ +KP+VV
Sbjct: 289 DVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQ 348
Query: 323 ----------------YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
YN L L +H+V +A +L DEM G+ D++TY I G C
Sbjct: 349 VRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFC 408
Query: 367 KNSYIVEAVELFRTLR 382
K + A +L T+R
Sbjct: 409 KMWQVDRAEDLLSTMR 424
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 183/388 (47%), Gaps = 30/388 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M+ R P V ++N+L C+ K + + K+++ G+ PD+ TYN LI
Sbjct: 242 VMDMMVR-RGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGL 300
Query: 63 CKMGRVSHGFVVLGRILR--SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+ + +L ++R + PN VTF S+I+GLC R+ +A + + GC
Sbjct: 301 SDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMV 360
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
N+ TYN LI GL R A+ L +EM S G+E PD
Sbjct: 361 NLVTYNLLIGGLLRVHKVRKAMELMDEMTS----LGLE-------------------PDS 397
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
TY+ +I+GFC + A+ LL M D+G++P + + ++ +C+ G M+ A L +
Sbjct: 398 FTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNE 457
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M + Y+T++ G C G + AKEL S+ G T +YSI+IN + K+ +
Sbjct: 458 MDN-NFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGD 516
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+E A + +M + G PDV ++++L ++ + +L EM +A D+ T
Sbjct: 517 MEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIIST 576
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCEL 388
L ++ E L ++L E+
Sbjct: 577 LSTSLVASN---EGKALLQSLPDFSAEI 601
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 156/320 (48%), Gaps = 28/320 (8%)
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVF---GCEPNVFTYNTLINGLYRTGHTIVAL 142
+AV++ +++ LC A AL + + C PN +Y L+ L
Sbjct: 76 DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALC--------- 126
Query: 143 NLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
+ D+A L M+ + DVVTY ++IRG C A + ++A L
Sbjct: 127 --------------ADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
+ EM + G++PNVV ++ ++ CK+G+ ++ ++ M + G+ P+ +Y L+D C
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCK 232
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G+ +A + M G V +Y++LIN CK ++ A+ + +M KG+ PDVV
Sbjct: 233 VGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVT 292
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDG--VAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
YNTL L ++ +++ A L +EM R V + T+ + I GLC + +A ++
Sbjct: 293 YNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAM 352
Query: 381 LRILKCELDIRAYNCLIDGL 400
+ C +++ YN LI GL
Sbjct: 353 MEETGCMVNLVTYNLLIGGL 372
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 124/400 (31%), Positives = 196/400 (49%), Gaps = 14/400 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N++ L K D + F+ + PD++TY+ L+N CK RV +
Sbjct: 172 PNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFL 231
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + PN VTF LI L + AA L + + GC PN TYNTLI+GL
Sbjct: 232 LDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCL 291
Query: 135 TGHTIVALNLFEEMASG-----NGEFG--VEGFVDKAK-----ELFLQMKDENINPDVVT 182
G AL+L E+M S +G + G V + + + + M++ +
Sbjct: 292 KGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYI 351
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+S+I G A L EM ++G +PNVV + +D LC++ K DEA +L M+
Sbjct: 352 YSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEML 411
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G PNAF Y++LM GF G +A ++ M S H V S+L+NG C++ +
Sbjct: 412 SKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLR 471
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM--QRDGVAADTWTYRT 360
AL+++ ML +G+KPDVV Y+++ L ++ V++ KLF EM Q D TY
Sbjct: 472 EALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNI 531
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ LC+ + A++L ++ C+ D N ++ L
Sbjct: 532 LFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 571
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 139/274 (50%), Gaps = 28/274 (10%)
Query: 113 LRVFGC-----EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKEL 167
L VFG +PN+ TYN +I L + G +D+A +
Sbjct: 160 LHVFGANSKGFQPNLLTYNLIIKALCKLGQ-----------------------IDRAVDT 196
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
F +M +N NPDV TY++++ G C +EA LL EM +G PN VTFNV++D L K
Sbjct: 197 FREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSK 256
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
NG + A++L+D M G PN YNTL+ G CL G++++A L M S C +
Sbjct: 257 NGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVT 316
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y +ING K + E + + M +G K + IY++L LF+ + E A +L+ EM
Sbjct: 317 YGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMA 376
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
G + Y FIDGLC++ EA ++ + +
Sbjct: 377 EKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEM 410
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 191/399 (47%), Gaps = 38/399 (9%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P PV +FN+L L+KN L + G P+ TYN LI+ C G++
Sbjct: 242 PNPV-TFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALS 300
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L +++ S PN VT+ ++I GL + R + + + G + N + Y++LI+GL+
Sbjct: 301 LLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLF 360
Query: 134 RTGHTIVALNLFEEMASGN--------GEFGVEGFV-----DKAKELFLQMKDENINPDV 180
+ G + A+ L++EMA G F ++G D+A+++ +M + P+
Sbjct: 361 KEGKSENAVRLWKEMAEKGCKPNVVVYGAF-IDGLCRDEKPDEAEDILQEMLSKGFLPNA 419
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
TY+S+++GF D +A + EMM Q ++ NVV +V+++ LC++G++ EA +
Sbjct: 420 FTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTH 479
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM--GCTHTVFSYSILINGYCKN 298
M+ G++P+ Y++++ G C G V++ +LF M+ V +Y+IL N C+
Sbjct: 480 MLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQ 539
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYN---------------------TLFVVLFEIHQVE 337
+ A+ L ML +G PD + N L V L + +
Sbjct: 540 DNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKL 599
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
A ++ +EM + + T+ I CK I E ++
Sbjct: 600 SALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETID 638
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 193/397 (48%), Gaps = 15/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ IL + D + L + + S G + + L+ C GRV
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + C P+ +T+T+L+ LC + EA + ++ GC P+ T++TLI+GL +
Sbjct: 67 FRAMAKDC-APDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125
Query: 135 TGHTIVALNLFEEMAS---GNGEFGVEGFVDK----------AKELFLQMKDENINPDVV 181
G A + E++ GN + E + + A ++ + + P V+
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+ VI GFC A D + A LL M+++G PNV TF +++ LCK ++ EA +LL+ M
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 245
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G PN Y+T+++G C G+V+ A ELF ME C V +++ILI+G CK K I
Sbjct: 246 VTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRI 305
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV-AADTWTYRT 360
E A LY M G PD++ YN+L L + QV+ AF+LF + GV AA+ TY T
Sbjct: 306 EEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYST 365
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
G + +A +F L D+ Y LI
Sbjct: 366 LFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLI 402
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 163/326 (50%), Gaps = 24/326 (7%)
Query: 45 STGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 104
+ G P + +N++IN FCK + + +L ++ PN TFT LI GLC +R+
Sbjct: 177 AKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVG 236
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKA 164
EA L K+ GC PNV TY+T+INGL + G VD A
Sbjct: 237 EAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQ-----------------------VDDA 273
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
ELF M+ N P+VVT+ +I G C A EA+ L M + G P+++T+N ++D
Sbjct: 274 YELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDG 333
Query: 225 LCKNGKMDEASRLLDLMIQIGVRP-NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
LCK+ ++DEA +L + + GV NA Y+TL G+ GR+ A +F + G +
Sbjct: 334 LCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSP 393
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
+ +Y+ LI YCK + L EM SKG P V + + LFE + ERA +LF
Sbjct: 394 DLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLF 453
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNS 369
D M G D Y ++G+ + S
Sbjct: 454 DSMAARGCTDDALIYNLVVEGMARAS 479
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 162/331 (48%), Gaps = 49/331 (14%)
Query: 118 CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAK 165
C PN FTY LI G G +A+ L EEM S E G V +A
Sbjct: 5 CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
E F M ++ PDV+TYT+++ C A ++EA+ +L EM+ +G P+ VTF+ ++D L
Sbjct: 65 EHFRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGL 123
Query: 226 CKNGKMDEASRLLDLMIQIGV------------------------------------RPN 249
CK G ++A R+L+ +IQ G+ P
Sbjct: 124 CKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPT 183
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
++N +++GFC ++ A +L M GC VF+++ILI G CK + A L
Sbjct: 184 VLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLE 243
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
+M++ G P+VV Y+T+ L + QV+ A++LF M+R + T+ IDGLCK
Sbjct: 244 KMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAK 303
Query: 370 YIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I EA +L+ +R C DI YN LIDGL
Sbjct: 304 RIEEARQLYHRMRETGCAPDIITYNSLIDGL 334
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 183/401 (45%), Gaps = 16/401 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +F IL L K L +++ + G P++ TY+ +IN CK G+V + +
Sbjct: 217 PNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYEL 276
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R PN VT LI GLC RI EA L+ ++R GC P++ TYN+LI+GL +
Sbjct: 277 FQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCK 336
Query: 135 TGHTIVALNLFEEM-----ASGNG--------EFGVEGFVDKAKELFLQMKDENINPDVV 181
+ A LF+ + ++ N + G + A +F + D+ +PD+
Sbjct: 337 SFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLA 396
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYTS+I +C + E L+ EM +G P V T + ++ L + + A +L D M
Sbjct: 397 TYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSM 456
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAK---ELFVSMESMGCTHTVFSYSILINGYCKN 298
G +A +YN +++G + N+A E + + + L+ C+
Sbjct: 457 AARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQV 516
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+ A L +M +G V YN L L + + + A ++F+ M G A + T
Sbjct: 517 GRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTV 576
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I LC + + +A EL + + L C DI N LI G
Sbjct: 577 NVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGG 617
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 163/371 (43%), Gaps = 51/371 (13%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++ R PP V + NIL L K K + L+ R+ TG PD+ TYN LI+ CK
Sbjct: 279 LMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSF 338
Query: 67 RVS--------------------------HGFVVLGRILRSC----------FTPNAVTF 90
+V HG+ LGR+ +C F+P+ T+
Sbjct: 339 QVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATY 398
Query: 91 TSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS 150
TSLI C SR +E L ++ G P V T + ++ GL+ HT A+ LF+ MA+
Sbjct: 399 TSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAA 458
Query: 151 GNG-------EFGVEGFVDKAK--------ELFLQMKDENINPDVVTYTSVIRGFCYAND 195
VEG +K E + +D NP +++ C
Sbjct: 459 RGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGR 518
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
++AK LL +M ++G V ++N ++ L + + DEA+++ + M+ G P N
Sbjct: 519 TDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNV 578
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
++ C +V+ A EL M +GC + + + LI GYCK+ + A L EM G
Sbjct: 579 VISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAG 638
Query: 316 IKPDVVIYNTL 326
++P+ ++ L
Sbjct: 639 LEPNDTTHDLL 649
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 111/360 (30%), Positives = 190/360 (52%), Gaps = 23/360 (6%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F Y ++ R P V ++ + + LF + GL PD+ T+ L+N +C
Sbjct: 796 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYC 855
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K G + F V ++++ +PN VT+T+LI GLC E + A L ++ G +PN+F
Sbjct: 856 KAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 915
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
TYN+++NGL ++G+ A+ L GEF G +N D VTY
Sbjct: 916 TYNSIVNGLCKSGNIEEAVKLV-------GEFEAAG----------------LNADTVTY 952
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
T+++ +C + + ++A+ +L EM+ +G+QP +VTFNV+M+ C +G +++ +LL+ M+
Sbjct: 953 TTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 1012
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G+ PNA +N L+ +C+ + A ++ M S G +Y L+ G+C + ++
Sbjct: 1013 KGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKE 1072
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A L+ EM KG V Y+ L F+ + A ++FD+M+RDG+AAD + F D
Sbjct: 1073 AWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSD 1132
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 204/395 (51%), Gaps = 15/395 (3%)
Query: 17 VCSFNILFGCLAKN-KHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVL 75
V S N+ L+K+ T + +F+ G+ ++ +YNI+I+ C++GR++ +L
Sbjct: 633 VDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLL 692
Query: 76 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRT 135
+ +TP+ ++++++I G C + + L K++ G +PN +TY ++I L R
Sbjct: 693 LLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRI 752
Query: 136 GHTIVALNLFEEMASGNGEFG--------VEGF-----VDKAKELFLQMKDENINPDVVT 182
A F EM G G V+GF + A + F +M +I PDV+T
Sbjct: 753 CKLAEAEEAFSEMI-GQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLT 811
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT++I GFC D EA L EM+ +G++P+++TF +M+ CK G + +A R+ + MI
Sbjct: 812 YTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMI 871
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q G PN Y TL+DG C G ++ A EL M +G +F+Y+ ++NG CK+ IE
Sbjct: 872 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 931
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ L GE + G+ D V Y TL + ++++A ++ EM G+ T+ +
Sbjct: 932 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLM 991
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+G C + + + +L + + +NCL+
Sbjct: 992 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLV 1026
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 197/405 (48%), Gaps = 12/405 (2%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++ ++ P V S++ + + D V L +++ GL P+ YTY +I C++
Sbjct: 694 LMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRIC 753
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+++ ++ P+ + +T+L+ G C I A+ F ++ P+V TY
Sbjct: 754 KLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 813
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDE 174
+I+G + G + A LF EM E + G + A + M
Sbjct: 814 AIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQA 873
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
+P+VVTYT++I G C D + A LL EM G+QPN+ T+N I++ LCK+G ++EA
Sbjct: 874 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 933
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+L+ G+ + Y TLMD +C +G +++A+E+ M G T+ ++++L+NG
Sbjct: 934 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNG 993
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
+C + +E L ML+KGI P+ +N L + ++ A ++ +M GV D
Sbjct: 994 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPD 1053
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
TY + G C + EA LF+ ++ + + Y+ LI G
Sbjct: 1054 GKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 1098
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 172/355 (48%), Gaps = 12/355 (3%)
Query: 40 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
F + G+ PD Y L++ FCK G + + TP+ +T+T++I G C
Sbjct: 762 FSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 821
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV-- 157
++EA LF ++ G EP++ T+ L+NG + GH A + M V
Sbjct: 822 IGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVT 881
Query: 158 ----------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
EG +D A EL +M + P++ TY S++ G C + + EA L+ E
Sbjct: 882 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 941
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
G+ + VT+ +MD CK+G+MD+A +L M+ G++P +N LM+GFCL G +
Sbjct: 942 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLE 1001
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
++L M + G +++ L+ YC ++ A ++Y +M S+G++PD Y L
Sbjct: 1002 DGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLV 1061
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
++ A+ LF EM+ G + TY I G K VEA E+F +R
Sbjct: 1062 KGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMR 1116
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 137/242 (56%)
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
G +++A L L M+ + PDV++Y++VI G+C + ++ L+ +M +G++PN T+
Sbjct: 683 GRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTY 742
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
I+ LC+ K+ EA MI G+ P+ VY TL+DGFC G + A + F M S
Sbjct: 743 GSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHS 802
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
T V +Y+ +I+G+C+ ++ A L+ EML +G++PD++ + L + ++
Sbjct: 803 RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKD 862
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
AF++ + M + G + + TY T IDGLCK + A EL + + + +I YN +++
Sbjct: 863 AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 922
Query: 399 GL 400
GL
Sbjct: 923 GL 924
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 93/225 (41%), Gaps = 23/225 (10%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ L K+ D + + GL P + T+N+L+N FC G + G +L +
Sbjct: 951 TYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 1010
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
L PNA TF L+K C + + A A++ + G EP+ TY L+ G +
Sbjct: 1011 LAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNM 1070
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
A LF+EM K + + V TY+ +I+GF + E
Sbjct: 1071 KEAWFLFQEM-----------------------KGKGFSVSVSTYSVLIKGFFKRKKFVE 1107
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
A+ + +M G+ + F+ D K + D +D +I+
Sbjct: 1108 AREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 1152
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 124/400 (31%), Positives = 196/400 (49%), Gaps = 14/400 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N++ L K D + F+ + PD++TY+ L+N CK RV +
Sbjct: 196 PNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFL 255
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + PN VTF LI L + AA L + + GC PN TYNTLI+GL
Sbjct: 256 LDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCL 315
Query: 135 TGHTIVALNLFEEMASG-----NGEFG--VEGFVDKAK-----ELFLQMKDENINPDVVT 182
G AL+L E+M S +G + G V + + + + M++ +
Sbjct: 316 KGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYI 375
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+S+I G A L EM ++G +PNVV + +D LC++ K DEA +L M+
Sbjct: 376 YSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEML 435
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G PNAF Y++LM GF G +A ++ M S H V S+L+NG C++ +
Sbjct: 436 SKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLR 495
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM--QRDGVAADTWTYRT 360
AL+++ ML +G+KPDVV Y+++ L ++ V++ KLF EM Q D TY
Sbjct: 496 EALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNI 555
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ LC+ + A++L ++ C+ D N ++ L
Sbjct: 556 LFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 595
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 139/274 (50%), Gaps = 28/274 (10%)
Query: 113 LRVFGC-----EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKEL 167
L VFG +PN+ TYN +I L + G +D+A +
Sbjct: 184 LHVFGANSKGFQPNLLTYNLIIKALCKLGQ-----------------------IDRAVDT 220
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
F +M +N NPDV TY++++ G C +EA LL EM +G PN VTFNV++D L K
Sbjct: 221 FREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSK 280
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
NG + A++L+D M G PN YNTL+ G CL G++++A L M S C +
Sbjct: 281 NGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVT 340
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y +ING K + E + + M +G K + IY++L LF+ + E A +L+ EM
Sbjct: 341 YGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMA 400
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
G + Y FIDGLC++ EA ++ + +
Sbjct: 401 EKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEM 434
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 191/399 (47%), Gaps = 38/399 (9%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P PV +FN+L L+KN L + G P+ TYN LI+ C G++
Sbjct: 266 PNPV-TFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALS 324
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L +++ S PN VT+ ++I GL + R + + + G + N + Y++LI+GL+
Sbjct: 325 LLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLF 384
Query: 134 RTGHTIVALNLFEEMASGN--------GEFGVEGFV-----DKAKELFLQMKDENINPDV 180
+ G + A+ L++EMA G F ++G D+A+++ +M + P+
Sbjct: 385 KEGKSENAVRLWKEMAEKGCKPNVVVYGAF-IDGLCRDEKPDEAEDILQEMLSKGFLPNA 443
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
TY+S+++GF D +A + EMM Q ++ NVV +V+++ LC++G++ EA +
Sbjct: 444 FTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTH 503
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM--GCTHTVFSYSILINGYCKN 298
M+ G++P+ Y++++ G C G V++ +LF M+ V +Y+IL N C+
Sbjct: 504 MLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQ 563
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYN---------------------TLFVVLFEIHQVE 337
+ A+ L ML +G PD + N L V L + +
Sbjct: 564 DNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKL 623
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
A ++ +EM + + T+ I CK I E ++
Sbjct: 624 SALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETID 662
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 131/405 (32%), Positives = 202/405 (49%), Gaps = 11/405 (2%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
Y + R PP + +F ++ D+ LSL + + G P+ Y LI+ K
Sbjct: 206 YDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKC 265
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
RV+ +L + P+A TF +I GLC RI EAA + ++ + G P+ TY
Sbjct: 266 NRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITY 325
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGN--------GEFGVEGFVDKAKELFLQM-KDENI 176
L+NGL + G A +LF + F G +D AK + M I
Sbjct: 326 GYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI 385
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
PDV TY S+I G+ A +L +M ++G +PNV ++ +++D CK GK+DEA
Sbjct: 386 VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 445
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+L+ M G++PN +N L+ FC R+ A E+F M GC V++++ LI+G C
Sbjct: 446 VLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC 505
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
+ EI+ AL L +M+S+G+ + V YNTL +++ A KL +EM G D
Sbjct: 506 EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEI 565
Query: 357 TYRTFIDGLCKNSYIVEAVELF-RTLRILKCELDIRAYNCLIDGL 400
TY + I GLC+ + +A LF + LR +I + N LI+GL
Sbjct: 566 TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNI-SCNILINGL 609
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 195/404 (48%), Gaps = 44/404 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS----- 69
P +FN + L K + + R+ G PD TY L+N CK+GRV
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344
Query: 70 ----------------HGFVVLGR------ILRSCFT-----PNAVTFTSLIKGLCAESR 102
HGFV GR +L T P+ T+ SLI G E
Sbjct: 345 FYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 404
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF-- 160
+ A + +R GC+PNV++Y L++G + G A N+ EM++ + GF
Sbjct: 405 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNC 464
Query: 161 ----------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG 210
+ +A E+F +M + PDV T+ S+I G C ++ A LL +M+ +G
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
V N VT+N +++ + G++ EA +L++ M+ G + YN+L+ G C G V++A+
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
LF M G + S +ILING C++ +E A+ EM+ +G PD+V +N+L L
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
++E +F ++Q +G+ DT T+ T + LCK ++ +A
Sbjct: 645 CRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 198/407 (48%), Gaps = 17/407 (4%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M N+ P S+N++ L + ++F + S + P L+T+ +++ FC +
Sbjct: 172 MRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVN 231
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ +L + + PN+V + +LI L +R+ EA L ++ + GC P+ T+N
Sbjct: 232 EIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFN 291
Query: 127 TLINGLYRTGHTIVALNLFEEM-----ASGNGEFGVE-------GFVDKAKELFLQMKDE 174
+I GL + A + M A + +G G VD AK+LF ++
Sbjct: 292 DVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP-- 349
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDE 233
P++V + ++I GF ++AK +L +M+ G+ P+V T+N ++ K G +
Sbjct: 350 --KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGL 407
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A +L M G +PN + Y L+DGFC G+++ A + M + G ++ LI+
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
+CK I A+ ++ EM KG KPDV +N+L L E+ +++ A L +M +GV A
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+T TY T I+ + I EA +L + LD YN LI GL
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGL 574
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 174/351 (49%), Gaps = 23/351 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P VC++N L K L + + + G P++Y+Y IL++ FCK+G++ + V
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + PN V F LI C E RI EA +F ++ GC+P+V+T+N+LI+GL
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
AL L +M S E + + VTY ++I F
Sbjct: 507 VDEIKHALWLLRDMIS-----------------------EGVVANTVTYNTLINAFLRRG 543
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ EA+ L+ EM+ QG + +T+N ++ LC+ G++D+A L + M++ G P+ N
Sbjct: 544 EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCN 603
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L++G C +G V A E M G T + +++ LING C+ IE L+++ ++ ++
Sbjct: 604 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 663
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
GI PD V +NTL L + V A L DE DG + T+ + +
Sbjct: 664 GIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 117/279 (41%), Gaps = 33/279 (11%)
Query: 154 EFGVEGFVDKAKELFLQMKD-ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
++ GF + L L+M++ + P +Y V+ N A + +M+ + +
Sbjct: 155 DYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIP 214
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
P + TF V+M C ++D A LL M + G PN+ +Y TL+ RVN A +L
Sbjct: 215 PTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQL 274
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
M MGC +++ +I G CK I A + ML +G PD + Y L L +
Sbjct: 275 LEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCK 334
Query: 333 IHQVERAFKLF--------------------------------DEMQRDGVAADTWTYRT 360
I +V+ A LF D + G+ D TY +
Sbjct: 335 IGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNS 394
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I G K + A+E+ +R C+ ++ +Y L+DG
Sbjct: 395 LIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDG 433
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 110/248 (44%), Gaps = 5/248 (2%)
Query: 153 GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD-QGV 211
G+ G G L +QMKDE I + S++R + A + L++EM +
Sbjct: 119 GKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSC 178
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
+P ++NV+++ L A+ + M+ + P F + +M FC ++ A
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
L M GC Y LI+ K + AL L EM G PD +N + + L
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIR 391
+ ++ A K+ + M G A D TY ++GLCK + A +LF RI K E+ I
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF--YRIPKPEIVI- 355
Query: 392 AYNCLIDG 399
+N LI G
Sbjct: 356 -FNTLIHG 362
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 12/231 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FN L L + L L + + S G+ + TYN LIN F + G + +
Sbjct: 492 PDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 551
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ ++ + +T+ SLIKGLC + +A +LF K+ G P+ + N LINGL R
Sbjct: 552 VNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCR 611
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
+G A+ +EM + G ++ +F +++ E I PD VT
Sbjct: 612 SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVT 671
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
+ +++ C +A LL E ++ G PN T+++++ + +D
Sbjct: 672 FNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 99/201 (49%), Gaps = 3/201 (1%)
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI-GVRPNAFVYNTLMDGF 260
LLI+M D+G+ F IM + K G + +RL+ M + P YN +++
Sbjct: 133 LLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLE-I 191
Query: 261 CLTGRVNR-AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
++G ++ A +F M S T+F++ +++ +C EI+ ALSL +M G P+
Sbjct: 192 LVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPN 251
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
VIY TL L + ++V A +L +EM G D T+ I GLCK I EA ++
Sbjct: 252 SVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVN 311
Query: 380 TLRILKCELDIRAYNCLIDGL 400
+ I D Y L++GL
Sbjct: 312 RMLIRGFAPDDITYGYLMNGL 332
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 66/135 (48%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
SP ++N L L + D SLF+++ G P + NILIN C+ G V
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAV 619
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
++ TP+ VTF SLI GLC RI + +F KL+ G P+ T+NTL++ L
Sbjct: 620 EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWL 679
Query: 133 YRTGHTIVALNLFEE 147
+ G A L +E
Sbjct: 680 CKGGFVYDACLLLDE 694
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ ML +P + S NIL L ++ + + K + G PD+ T+N LIN
Sbjct: 586 LFEKMLRDGHAPSNI-SCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ GR+ G + ++ P+ VTF +L+ LC + +A L + G PN
Sbjct: 645 CRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNH 704
Query: 123 FTYNTLINGL 132
T++ L+ +
Sbjct: 705 RTWSILLQSI 714
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 52/100 (52%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F + +R S P + +FN L L + + L++F++L + G+ PD T+N L++ C
Sbjct: 621 FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLC 680
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRI 103
K G V ++L + F PN T++ L++ + + +
Sbjct: 681 KGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETL 720
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 207/414 (50%), Gaps = 15/414 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ I + ML +P SFNIL A+ + D ++ F+ + PDL+T+ IL++
Sbjct: 139 YAIHEEMLKAGIAPNTF-SFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVD 197
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTP-NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 119
C CK G F V ++ F P + T++++ L R+ EA +F ++ G
Sbjct: 198 CLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFP 257
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASG-----NGEFGV-------EGFVDKAKEL 167
P+ YNT+I+GL + GH AL + + M + +G+ G +++A+EL
Sbjct: 258 PDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEEL 317
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
F M P+ V YTS+I GF + EA L EM++ G +P+V+T V++D LCK
Sbjct: 318 FRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCK 377
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
+G ++A++ + M++ G +PN Y T++ G GRV A + M + GC +
Sbjct: 378 SGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVT 437
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF-KLFDEM 346
Y L++G+CK ++ A L E+ P++ +Y++L L + VE+ LF++
Sbjct: 438 YICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQS 497
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ D + I GLCK + EA +F+ + C+ D YN LI+GL
Sbjct: 498 KAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGL 551
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 127/425 (29%), Positives = 195/425 (45%), Gaps = 61/425 (14%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP ++N + LAK H L + + + P TY IL+N CK G +
Sbjct: 257 PPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEE 316
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ + S F PN+V +TSLI G R+ EA +LF ++ G P+V T+ +I+GL
Sbjct: 317 LFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLC 376
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
++G+ A FEEM G P+VVTYT++I+G
Sbjct: 377 KSGNFEQAAKSFEEMMRG-----------------------GCKPNVVTYTTIIQGLSKI 413
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
A ++ M+ G P+ VT+ ++D CK G++DEA++LLD + + PN +Y
Sbjct: 414 GRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLY 473
Query: 254 NTLMD------------------------------------GFCLTGRVNRAKELFVSME 277
++L++ G C TGR++ A +F M
Sbjct: 474 SSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMV 533
Query: 278 SMGCTHTVFSYSILINGYCKNKE--IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
S GC +Y+ILING C+++E +E A +L ++ G PD V Y L + L +I +
Sbjct: 534 SEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGE 593
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
V+RA K+ +E G AD Y GLC + AV LF+ + D AY C
Sbjct: 594 VDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCC 653
Query: 396 LIDGL 400
+I+GL
Sbjct: 654 IINGL 658
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 184/387 (47%), Gaps = 28/387 (7%)
Query: 35 TVLSLFKRLN-STGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
T +S F+ G D++TYN L+N S + + +L++ PN +F L
Sbjct: 101 TAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNIL 160
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG 153
I+ R +A F ++ C+P++ T+ L++ L + G A +F EM +
Sbjct: 161 IRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMA--- 217
Query: 154 EFGVEGFV--------------------DKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
GFV +A+E+F QM+ PD + Y ++I G A
Sbjct: 218 ----MGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKA 273
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
EA +L M+ + P VT+ ++++ LCK G ++ A L +M G RPN+ +Y
Sbjct: 274 GHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIY 333
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
+L+ GF +GR+ A LF M G V +++++I+G CK+ E A + EM+
Sbjct: 334 TSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMR 393
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
G KP+VV Y T+ L +I +V AF++ M G D+ TY +DG CK + E
Sbjct: 394 GGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDE 453
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A +L L +++ Y+ L++GL
Sbjct: 454 AAQLLDELDKCSSSPNLQLYSSLVNGL 480
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/396 (30%), Positives = 187/396 (47%), Gaps = 19/396 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+ P V + ++ L K+ +++ F+ + G P++ TY +I
Sbjct: 352 LFDEMVEA-GYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGL 410
Query: 63 CKMGRVSHGFVVL-GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
K+GRV++ F ++ G I CF P++VT+ L+ G C R+ EAA L +L PN
Sbjct: 411 SKIGRVANAFRIMKGMIAHGCF-PDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPN 469
Query: 122 VFTYNTLINGLYRTGHTIVALN-LFEE--MASGNGEFGV----------EGFVDKAKELF 168
+ Y++L+NGL G L+ LFE+ A+ + G+ G +D+A +F
Sbjct: 470 LQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIF 529
Query: 169 LQMKDENINPDVVTYTSVIRGFCYA--NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
+M E PD TY +I G C + N A LL ++ G P+ VT+ + LC
Sbjct: 530 QRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLC 589
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
K G++D A ++L+ G + Y L G C G+V+RA LF M G
Sbjct: 590 KIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAA 649
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+Y +ING K K++E A + EM+ KG KP V Y L L V+ AF F+ M
Sbjct: 650 AYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESM 709
Query: 347 -QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
R + Y I G CK + A++LF +
Sbjct: 710 LARGELVGSVMIYDALIHGFCKALKVDAALKLFEDM 745
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 182/405 (44%), Gaps = 51/405 (12%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L+K + K + + G FPD TY L++ FCK+GR+ +
Sbjct: 398 PNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQL 457
Query: 75 LGRILRSCFTPNAVTFTSLIKGLC-------------------AES-------------- 101
L + + +PN ++SL+ GLC AE+
Sbjct: 458 LDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLC 517
Query: 102 ---RIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV--ALNLFEEMAS-GNGEF 155
R+ EA +F ++ GC+P+ TYN LINGL R+ V A L ++ G
Sbjct: 518 KTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPD 577
Query: 156 GVE-----------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
V G VD+A ++ + N DVV YT++ G CY + A L
Sbjct: 578 AVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQ 637
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
EM+ QG P+ + I++ L K K+++A + D MI G +P Y L+ C G
Sbjct: 638 EMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAG 697
Query: 265 RVNRAKELFVSMESMG-CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
V+ A F SM + G +V Y LI+G+CK +++ AL L+ +M+S+G P V
Sbjct: 698 NVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTS 757
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
+LF L + E+A +L EM G T+ +DGL K+
Sbjct: 758 ASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKS 802
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 147/311 (47%), Gaps = 17/311 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM--GRVSHGF 72
P +C +I+ G L K D +F+R+ S G PD TYNILIN C+ RV F
Sbjct: 506 PGLCC-SIIVG-LCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAF 563
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+L + + + P+AVT+T L GLC + A + + G +V Y L GL
Sbjct: 564 ALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGL 623
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDV 180
G A++LF+EM G + ++ A + F +M + P V
Sbjct: 624 CYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTV 683
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLD 239
TYT++++ C+A + +EA M+ +G + +V+ ++ ++ CK K+D A +L +
Sbjct: 684 ATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFE 743
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
MI G P A +L DG +G+ +A+EL M + G +++ +++G K+
Sbjct: 744 DMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSD 803
Query: 300 EIEGALSLYGE 310
E L L E
Sbjct: 804 ESGKLLKLVQE 814
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 125/416 (30%), Positives = 184/416 (44%), Gaps = 54/416 (12%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S+N + LA D F + G PD+ + LI+ FCK G+ G +
Sbjct: 5 PTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKL 64
Query: 75 LGRILRS---------------------------CFTPNA----VTFTSLIKGLCAESRI 103
L + L+ TP A +++T++IKGL RI
Sbjct: 65 LNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRI 124
Query: 104 MEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDK 163
EA LF +L+ GC PNV Y +I+GL + G L FEEM+
Sbjct: 125 DEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSG------------- 171
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
+ P TYT VI G C A +A + +M+ +G P+ +T+ ++D
Sbjct: 172 ----------SSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLID 221
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
K KMDEA +LLD+M+ G P A Y +++ GFC +N AKE+ M GC
Sbjct: 222 GFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEP 281
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
+F ++ L++ Y E A + EM ++G PDV++Y +L +LF +V A +F
Sbjct: 282 GLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVF 341
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
D M G A D TY T I K + A E+ + D AYN L+DG
Sbjct: 342 DSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDG 397
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 196/432 (45%), Gaps = 48/432 (11%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V S+ + LA +K D LF+ L + G P++ Y +I+ K GR+ G
Sbjct: 108 VISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFE 167
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ S P T+T +I GLC + +A +F ++ GC P+ TY TLI+G +
Sbjct: 168 EMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKAS 227
Query: 137 HTIVALNLFEEMASGNGE-----FG--VEGF-----VDKAKELFLQMKDENINPDVVTYT 184
A L + M + E +G V GF +++AKE+ QM++ P + +T
Sbjct: 228 KMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFT 287
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
S++ + EA +L EM +G P+V+ + ++D L G++ EA + D MI+
Sbjct: 288 SLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEK 347
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G P+A Y T++ F G V A E+ M G F+Y+ L++GY K + ++ A
Sbjct: 348 GCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQA 407
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD--------------- 349
+Y M++ GIKP+ V +N L LF+ + +RAF LF EM
Sbjct: 408 FGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILID 467
Query: 350 ---------------------GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
G+ + TY + I L K I EA +L + L
Sbjct: 468 GLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNP 527
Query: 389 DIRAYNCLIDGL 400
D++AY+ LI GL
Sbjct: 528 DVQAYSALITGL 539
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 185/398 (46%), Gaps = 13/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ ++ L K + +F+++ G PD TY LI+ F K ++ +
Sbjct: 176 PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKL 235
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L P AVT+ S++ G C I EA + ++R GCEP +F + +L++
Sbjct: 236 LDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLS 295
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G A + EM + V G V +A+ +F M ++ PD +T
Sbjct: 296 KGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALT 355
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I+ F + A +L M GV P+ +N +MD K ++D+A + D M+
Sbjct: 356 YGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMV 415
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMGCTHTVFSYSILINGYCKNKEI 301
G++PNA +N LM G G+ +RA LF M E T+ SY+ILI+G K +
Sbjct: 416 ASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRV 475
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A + EM+ +GI P+ Y +L L + ++ A KL ++M + GV D Y
Sbjct: 476 SEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSAL 535
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I GL +S + A ++F+ + C + Y L G
Sbjct: 536 ITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRG 573
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 157/337 (46%), Gaps = 14/337 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D ML P P V +I+ G K + + ++ G P L+ + L++ +
Sbjct: 235 LLDVMLTKGPEPTAVTYGSIVHG-FCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYY 293
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
GR + VL + P+ + +TSLI L + R+ EA +F + GC P+
Sbjct: 294 LSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDA 353
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMA-SGNGE--FG----VEGFV-----DKAKELFLQ 170
TY T+I + G+ A + E MA SG G F ++G+V D+A ++ +
Sbjct: 354 LTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDR 413
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD-QGVQPNVVTFNVIMDELCKNG 229
M I P+ VT+ ++ G + A L EM++ + V P +V++ +++D L K G
Sbjct: 414 MVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAG 473
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
++ EA MI G+ P Y +L+ GR+ AK+L M +G V +YS
Sbjct: 474 RVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYS 533
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
LI G + ++ A ++ EM+ +G P+ V Y L
Sbjct: 534 ALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 570
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 127/293 (43%), Gaps = 14/293 (4%)
Query: 116 FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFV-----------DKA 164
GCEP + +YNT+I+GL A F M E V F +
Sbjct: 1 MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
L + PDV YTSVI G+C A D + + +V+++ ++
Sbjct: 61 GHKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTG---YFRAVTPKASLDVISYTTVIKG 117
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
L + ++DEA L + + G PN Y ++DG GR+ + F M C T
Sbjct: 118 LADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPT 177
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
+Y+++I+G CK + + A ++ +M+ KG PD + Y TL + +++ A KL D
Sbjct: 178 RTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLD 237
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
M G TY + + G CK I EA E+ +R CE + + L+
Sbjct: 238 VMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLL 290
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 134/288 (46%), Gaps = 22/288 (7%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P V + L L +F + G PD TY +I F K+G
Sbjct: 309 MTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGN 368
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V +L + +S P+ + SL+ G R+ +A ++ ++ G +PN T+N
Sbjct: 369 VEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNV 428
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
L++GL++ G T A +LF+EM ++ E + P +V+YT +I
Sbjct: 429 LMHGLFKDGKTDRAFSLFKEM----------------------LEKEEVPPTLVSYTILI 466
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
G A +EA EM+D+G+ P T+ ++ L K G++ EA +L++ M+++GV
Sbjct: 467 DGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVN 526
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
P+ Y+ L+ G + V+ A ++F M GC +Y +L G+
Sbjct: 527 PDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGF 574
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 31/221 (14%)
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR---- 265
G +P +V++N ++ L KMDEA + + MI G P+ + TL+ GFC G+
Sbjct: 2 GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61
Query: 266 ---VNRAKE-------LFVSMESMGC-----------------THTVFSYSILINGYCKN 298
+N+A + L+ S+ C + V SY+ +I G +
Sbjct: 62 HKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADS 121
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
K I+ A L+ E+ + G P+VV Y + L + ++E K F+EM TY
Sbjct: 122 KRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTY 181
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
IDGLCK + +A ++F + C D Y LIDG
Sbjct: 182 TVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDG 222
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 10/160 (6%)
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
+G P YNT++ G +++ A + F SM GC V +++ LI+G+CK + +
Sbjct: 1 MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR---DGVAADTWTYRT 360
L + L K +PDV +Y ++ IH +A L R + D +Y T
Sbjct: 61 GHKLLNQAL-KRFRPDVFLYTSV------IHGYCKAGDLDTGYFRAVTPKASLDVISYTT 113
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I GL + I EA ELF L+ C ++ AY +IDGL
Sbjct: 114 VIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGL 153
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F ML PP + S+ IL L K F+ + G+ P+ +TY LI
Sbjct: 443 FSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIY 502
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
K GR+ ++ +++ P+ +++LI GL S + A +F ++ GC P
Sbjct: 503 SLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAP 562
Query: 121 NVFTYNTLINGLYRTGHTI 139
N TY L G G +
Sbjct: 563 NEVTYKVLRRGFRAAGRAL 581
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 193/391 (49%), Gaps = 18/391 (4%)
Query: 8 LNMRPSP---PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCK 64
+++ P P P S+ +L L ++ D + L + + S G+ D+ TY LI C
Sbjct: 103 MSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCD 162
Query: 65 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFT 124
V ++G + S PN V ++SL++G C R + +F ++ G EP+V
Sbjct: 163 AAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVM 222
Query: 125 YNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMK 172
Y LI+ L + G A + + M E V EG V +A + +M
Sbjct: 223 YTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMS 282
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG--VQPNVVTFNVIMDELCKNGK 230
++ + PDVVTY ++I+G + +EA LL EM+ V+PNVVTFN ++ LC G+
Sbjct: 283 EKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGR 342
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
M +A ++ +M + G N YN L+ G +V +A EL M S+G F+YSI
Sbjct: 343 MRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSI 402
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI G+CK +++ A L M +GI+P++ Y L V + E +ERA LF+EM +
Sbjct: 403 LIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMD-NN 461
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
D Y T I G CK + A EL +++
Sbjct: 462 FPLDVVAYSTMIHGACKAGDLKTAKELLKSI 492
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 171/376 (45%), Gaps = 71/376 (18%)
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRILRS-------CFTPNAVTFTSLIKGLCAESRI 103
D +YN ++ C+ G G +LR+ PNAV++T L++ LCA+
Sbjct: 76 DAVSYNTVLTALCRRGHHDRA----GALLRAMSLEPHPACRPNAVSYTVLMRALCADRLA 131
Query: 104 MEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDK 163
+A L +R G +V TY TLI GL VDK
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAE-----------------------VDK 168
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
A EL +M + I P+VV Y+S+++G+C + W + + +EM ++G++P+VV + ++D
Sbjct: 169 AVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLID 228
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
LCK GK +A ++D+M++ G+ PN YN L++ C G V A + M G
Sbjct: 229 SLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAP 288
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKG--IKPDVVI------------------- 322
V +Y+ LI G E++ A+ L EM+ +KP+VV
Sbjct: 289 DVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQ 348
Query: 323 ----------------YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
YN L L +H+V +A +L DEM G+ D++TY I G C
Sbjct: 349 VRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFC 408
Query: 367 KNSYIVEAVELFRTLR 382
K + A +L T+R
Sbjct: 409 KMWQVDRAEDLLSTMR 424
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 183/388 (47%), Gaps = 30/388 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M+ R P V ++N+L C+ K + + K+++ G+ PD+ TYN LI
Sbjct: 242 VMDMMVR-RGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGL 300
Query: 63 CKMGRVSHGFVVLGRILR--SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+ + +L ++R + PN VTF S+I+GLC R+ +A + + GC
Sbjct: 301 SDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMV 360
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
N+ TYN LI GL R A+ L +EM S G+E PD
Sbjct: 361 NLVTYNLLIGGLLRVHKVRKAMELMDEMTS----LGLE-------------------PDS 397
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
TY+ +I+GFC + A+ LL M D+G++P + + ++ +C+ G M+ A L +
Sbjct: 398 FTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNE 457
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M + Y+T++ G C G + AKEL S+ G T +YSI+IN + K+ +
Sbjct: 458 MDN-NFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGD 516
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+E A + +M + G PDV ++++L ++ + +L EM +A D+ T
Sbjct: 517 MEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIIST 576
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCEL 388
L ++ E L ++L E+
Sbjct: 577 LSTSLVASN---EGKALLQSLPDFSAEI 601
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 156/320 (48%), Gaps = 28/320 (8%)
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVF---GCEPNVFTYNTLINGLYRTGHTIVAL 142
+AV++ +++ LC A AL + + C PN +Y L+ L
Sbjct: 76 DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALC--------- 126
Query: 143 NLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
+ D+A L M+ + DVVTY ++IRG C A + ++A L
Sbjct: 127 --------------ADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
+ EM + G++PNVV ++ ++ CK+G+ ++ ++ M + G+ P+ +Y L+D C
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCK 232
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G+ +A + M G V +Y++LIN CK ++ A+ + +M KG+ PDVV
Sbjct: 233 VGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVT 292
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDG--VAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
YNTL L ++ +++ A L +EM R V + T+ + I GLC + +A ++
Sbjct: 293 YNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAM 352
Query: 381 LRILKCELDIRAYNCLIDGL 400
+ C +++ YN LI GL
Sbjct: 353 MEETGCMVNLVTYNLLIGGL 372
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 199/392 (50%), Gaps = 18/392 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FN++ + K D + +F+ + + PD+YTY L++ CK R+ +
Sbjct: 167 PNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSL 226
Query: 75 LGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
L + + CF P+ VTF LI GLC + + A L + + GC PN TYNTLI+GL
Sbjct: 227 LDEMQIDGCF-PSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLC 285
Query: 134 RTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDV 180
G A++L + M S NG +D A+ L L M++ + +
Sbjct: 286 LKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLAL-MEERGYHVNE 344
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
Y+++I G EA L EM + + N + ++ ++D LC++GK DEA +L
Sbjct: 345 YVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSE 404
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M +PNA+ Y++LM GF G ++A E++ M T YS+LI+G CK+ +
Sbjct: 405 MTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGK 464
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM--QRDGVAADTWTY 358
++ A+ ++ +ML KG KPDVV Y ++ L VE A +L++EM Q D TY
Sbjct: 465 VKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTY 524
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
++ LCK S I A++L ++ C+ D+
Sbjct: 525 NILLNALCKQSSISRAIDLLNSMLDRGCDPDL 556
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 187/401 (46%), Gaps = 26/401 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRL---NSTGLFPDLYTYNILI 59
+FD M V SFN + + + + L + + + P++ T+N++I
Sbjct: 117 LFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVI 176
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 119
CK+G V + + S P+ T+ +L+ GLC RI EA +L ++++ GC
Sbjct: 177 KTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCF 236
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPD 179
P+ T+N LINGL + G L + M FL+ P+
Sbjct: 237 PSPVTFNVLINGLCKKGDLARVAKLVDNM-------------------FLK----GCAPN 273
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
VTY ++I G C +A LL M+ PNVVT+ I++ L K G+ + +R+L
Sbjct: 274 EVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLA 333
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
LM + G N +VY+ L+ G G+ A +LF M C YS +I+G C++
Sbjct: 334 LMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDG 393
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
+ + AL + EM + KP+ Y++L FE +A +++ +M + + Y
Sbjct: 394 KPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYS 453
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I GLCK+ + EA+ ++ + C+ D+ AY +I+GL
Sbjct: 454 VLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGL 494
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 172/366 (46%), Gaps = 16/366 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH-GFV 73
P V ++ L L K D +SL + G FP T+N+LIN CK G ++ +
Sbjct: 202 PDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKL 261
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
V L+ C PN VT+ +LI GLC + ++ +A +L ++ C PNV TY T+INGL
Sbjct: 262 VDNMFLKGC-APNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLV 320
Query: 134 RTGHTIVA---LNLFEEMASGNGEF-------GV--EGFVDKAKELFLQMKDENINPDVV 181
+ G + L L EE E+ G+ EG +A +LF +M + + +
Sbjct: 321 KQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTI 380
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y++VI G C +EA +L EM + +PN T++ +M + G +A + M
Sbjct: 381 VYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDM 440
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ N Y+ L+ G C G+V A ++ M GC V +Y +ING +
Sbjct: 441 AKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLV 500
Query: 302 EGALSLYGEMLSK--GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
E AL LY EML + +PDVV YN L L + + RA L + M G D T
Sbjct: 501 EDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCI 560
Query: 360 TFIDGL 365
F+ L
Sbjct: 561 IFLRTL 566
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 174/370 (47%), Gaps = 32/370 (8%)
Query: 54 TYNILINCFCKMGRVSHGFVVLGR-------ILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
T+ LI+ + +G VL R ++ CF V F + K E +A
Sbjct: 62 TFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEKCFV---VIFKAYGKAHLPE----KA 114
Query: 107 AALFTKLRV-FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG--------EFGV 157
LF ++ F C+ V ++N+++N + + G AL + + G F +
Sbjct: 115 VGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNL 174
Query: 158 E-------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG 210
G VD A ++F M PDV TY +++ G C A+ +EA LL EM G
Sbjct: 175 VIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDG 234
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
P+ VTFNV+++ LCK G + ++L+D M G PN YNTL+ G CL G++ +A
Sbjct: 235 CFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAI 294
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKN-KEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
L M S C V +Y +ING K + ++GA L M +G + +Y+ L
Sbjct: 295 SLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVL-ALMEERGYHVNEYVYSALISG 353
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
LF+ + + A +LF EM +T Y IDGLC++ EA+E+ + +C+ +
Sbjct: 354 LFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPN 413
Query: 390 IRAYNCLIDG 399
Y+ L+ G
Sbjct: 414 AYTYSSLMKG 423
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 119/271 (43%), Gaps = 42/271 (15%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
++ + L ++ D L + + + P+ YTY+ L+ F + G + +
Sbjct: 382 YSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMA 441
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+ FT N V ++ LI GLC + ++ EA ++ ++ GC+P+V Y ++INGL G
Sbjct: 442 KHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVE 501
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
AL L+ EM ++ + PDVVTY ++ C + + A
Sbjct: 502 DALQLYNEMLC---------------------QEPDSQPDVVTYNILLNALCKQSSISRA 540
Query: 200 KCLLIEMMDQGVQPNVVT---------------------FNVIMDELCKNGKMDEASRLL 238
LL M+D+G P++VT + ++ L K ++ AS+++
Sbjct: 541 IDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREFLDGLVVRLLKRQRVLGASKIV 600
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
++M+Q + P + +++ C +V A
Sbjct: 601 EVMLQKLLPPKPSTWTRVVEDLCNPKKVQAA 631
>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 653
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 127/396 (32%), Positives = 196/396 (49%), Gaps = 18/396 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V SFN++ + K D + LF+ + PD YTY L++ CK+ R+ +
Sbjct: 179 PNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSL 238
Query: 75 LGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
L + + CF P+ TF LI GLC + L + + GC PN TYNTLI+GL
Sbjct: 239 LDEMQIEGCF-PSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC 297
Query: 134 RTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDV 180
G AL+L + M S NG +D A+ L L M++ +
Sbjct: 298 LKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVL-MEERGYIVNE 356
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
Y+ ++ G EA L E MD+G + N V ++ ++D LC++ K DEA ++L
Sbjct: 357 YVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSE 416
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M G PNAF +++LM GF G ++A E++ M + C YS+LI+G CK+ +
Sbjct: 417 MTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGK 476
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM--QRDGVAADTWTY 358
+ A+ ++ +ML+ G +PDVV Y+++ L + VE A KL++EM D TY
Sbjct: 477 VMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITY 536
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
+ LCK S I AV+L ++ C+ D+ N
Sbjct: 537 NILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCN 572
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 192/390 (49%), Gaps = 28/390 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRL---NSTGLFPDLYTYNILINCFCKMGRVSHG 71
P V SFN + + + +D L + + + P++ ++N++I CK+G V +
Sbjct: 141 PTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNA 200
Query: 72 FVVLGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ + +R C P+A T+ +L+ GLC RI EA +L ++++ GC P+ T+N LIN
Sbjct: 201 IELFREMPVRKC-VPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLIN 259
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
GL + G L + M ++G V P+ VTY ++I G
Sbjct: 260 GLCKKGDFTRVTKLVDNMF-------LKGCV----------------PNEVTYNTLIHGL 296
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C ++A LL M+ PN VT+ I++ L K G+ + +R+L LM + G N
Sbjct: 297 CLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNE 356
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
+VY+ L+ G G+ A LF GC YS L++G C++++ + A+ + E
Sbjct: 357 YVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSE 416
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M KG P+ +++L FE+ +A +++ +M + A + Y I GLCK+
Sbjct: 417 MTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGK 476
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++EA+ ++ + C D+ AY+ +I GL
Sbjct: 477 VMEAMMVWAKMLATGCRPDVVAYSSMIQGL 506
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 170/350 (48%), Gaps = 18/350 (5%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
PSP +FN+L L K + V L + G P+ TYN LI+ C G++
Sbjct: 249 PSP---ATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 305
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
+L R++ S PN VT+ ++I GL + R ++ A + + G N + Y+ L++G
Sbjct: 306 LSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSG 365
Query: 132 LYRTGHTIVALNLFEEMASGNGEFG-------VEGFV-----DKAKELFLQMKDENINPD 179
L++ G + A+ LF+E + V+G D+A ++ +M D+ P+
Sbjct: 366 LFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPN 425
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
T++S+++GF + ++A + +M N V ++V++ LCK+GK+ EA +
Sbjct: 426 AFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWA 485
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM--GCTHTVFSYSILINGYCK 297
M+ G RP+ Y++++ G C G V A +L+ M + V +Y+IL N CK
Sbjct: 486 KMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCK 545
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE-IHQVERAFKLFDEM 346
I A+ L ML +G PD+V N +L E + + K DE+
Sbjct: 546 QSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDPPQDGAKFLDEL 595
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 153/312 (49%), Gaps = 18/312 (5%)
Query: 105 EAAALFTKLRV-FGCEPNVFTYNTLINGLYRTG----------HTIVA--LNLFEEMASG 151
+A LF ++ F C+P V ++N+++N + + G H + A +N+ + S
Sbjct: 125 KAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSF 184
Query: 152 N---GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD 208
N G VD A ELF +M PD TY +++ G C + +EA LL EM
Sbjct: 185 NLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQI 244
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
+G P+ TFNV+++ LCK G ++L+D M G PN YNTL+ G CL G++++
Sbjct: 245 EGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDK 304
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKN-KEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A L M S C +Y +ING K + ++GA L M +G + +Y+ L
Sbjct: 305 ALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLV-LMEERGYIVNEYVYSVLV 363
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
LF+ + E A +LF E G +T Y +DGLC++ EA+++ + C
Sbjct: 364 SGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCA 423
Query: 388 LDIRAYNCLIDG 399
+ ++ L+ G
Sbjct: 424 PNAFTFSSLMKG 435
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 120/385 (31%), Positives = 183/385 (47%), Gaps = 58/385 (15%)
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 110
D YT + LI C GR ++ VL +LR P+ VT+T L++ C S +A L
Sbjct: 159 DAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLL 218
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQ 170
++R GC P++ TYN ++NG+ + EG VD A E
Sbjct: 219 DEMRDKGCTPDIVTYNVVVNGICQ-----------------------EGRVDDAIEFLKN 255
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG- 229
+ P+ V+Y V++G C A W +A+ L+ EM +G PNVVTFN+++ LC+ G
Sbjct: 256 LPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGL 315
Query: 230 ----------------------------------KMDEASRLLDLMIQIGVRPNAFVYNT 255
KMD+A LDLM+ G P+ YNT
Sbjct: 316 VEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNT 375
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L+ C +G V+ A EL ++ GC + SY+ +I+G K + + AL L EM+SKG
Sbjct: 376 LLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKG 435
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
++PD++ Y+T+ L ++E A + F ++Q G+ +T Y I GLCK A+
Sbjct: 436 LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAI 495
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
+LF + C + Y LI+GL
Sbjct: 496 DLFAYMIGNGCMPNESTYTILIEGL 520
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 178/381 (46%), Gaps = 24/381 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ D ML R P V ++ IL K Y + L + G PD+ TYN+++N
Sbjct: 180 LAVLDEMLRRR-CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVN 238
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C+ GRV L + PN V++ ++KGLC R +A L ++ GC P
Sbjct: 239 GICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPP 298
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
NV T+N LI+ L R +G V+ A E+ Q+ +P+
Sbjct: 299 NVVTFNMLISFLCR-----------------------KGLVEPALEVLEQIPKYGCSPNS 335
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
++Y ++ FC ++A L M+ +G P++V++N ++ LC++G++D A LL
Sbjct: 336 LSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQ 395
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+ G P YNT++DG G+ A EL M S G + +YS + G C+
Sbjct: 396 LKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDR 455
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
IE A+ +G++ GI+P+ V+YN + + L + + A LF M +G + TY
Sbjct: 456 IEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTI 515
Query: 361 FIDGLCKNSYIVEAVELFRTL 381
I+GL I EA +L L
Sbjct: 516 LIEGLAYEGLIKEARDLLDEL 536
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 144/324 (44%), Gaps = 31/324 (9%)
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
R++ S P+A T +LIK L A R EA + C P+V YN ++ G G
Sbjct: 88 RLVGSARRPDAGTCAALIKKLSASGRTAEARRVLA-----ACGPDVMAYNAMMAGYCGAG 142
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
A E A + D T ++IRG C
Sbjct: 143 QVDAARRWCAERA--------------------------VERDAYTCDTLIRGLCGRGRT 176
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
A +L EM+ + P+VVT+ ++++ CK +A +LLD M G P+ YN +
Sbjct: 177 ANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVV 236
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
++G C GRV+ A E ++ S GC SY+I++ G C + E A L GEM KG
Sbjct: 237 VNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGC 296
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
P+VV +N L L VE A ++ +++ + G + ++ +Y + CK + +A+
Sbjct: 297 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMA 356
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
+ C DI +YN L+ L
Sbjct: 357 FLDLMVSRGCYPDIVSYNTLLTAL 380
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 64/150 (42%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
+ L + P + S+N + L K L L + S GL PD+ TY+ + C+
Sbjct: 394 HQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCRE 453
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
R+ G++ PN V + ++I GLC A LF + GC PN TY
Sbjct: 454 DRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTY 513
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGNGEF 155
LI GL G A +L +E+ S E
Sbjct: 514 TILIEGLAYEGLIKEARDLLDELCSRGEEI 543
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 189/371 (50%), Gaps = 12/371 (3%)
Query: 41 KRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 100
K L GL PDL TY +LI C+MG + + +L S F N + ++ L+ LC
Sbjct: 280 KMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKR 339
Query: 101 SRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM------ASGNGE 154
++ EA L ++ +P++ TY+ LI+GL + G A+ L++EM +
Sbjct: 340 GQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAH 399
Query: 155 FGV------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD 208
G+ +G + A+ F + N+ PDV Y +I G+ D EA L + D
Sbjct: 400 SGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRD 459
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
+ + P++VTFN ++ CKN K+ EA RLL+ + G+ P+A Y TLM+ +C G +N+
Sbjct: 460 KAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINK 519
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
EL + M TV +Y+++I G CK +++E ++ L +M +KG+ PD + YNT+
Sbjct: 520 LHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQ 579
Query: 329 VLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
+ + +AF+L D+M + TY IDGLC+ + +A + +L+ L
Sbjct: 580 CFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINL 639
Query: 389 DIRAYNCLIDG 399
AY +I
Sbjct: 640 TKVAYTTMIKA 650
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 191/399 (47%), Gaps = 13/399 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S+NIL L + L L + GL PD+ TY I+ F +G +S +
Sbjct: 218 PDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREI 277
Query: 75 LGRILR-SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ ++L P+ VT+T LI G C I EA L L G + NV Y+ L++ L
Sbjct: 278 IQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLC 337
Query: 134 RTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVV 181
+ G AL L EM + N + + +G V +A +L+ +M I P+
Sbjct: 338 KRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSF 397
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
++ +++G C ++A+ ++ ++P+V +N+++D K G ++EA RL +
Sbjct: 398 AHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRL 457
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ P+ +N+L+ GFC +V A+ L S++ G + +Y+ L+N YC+ I
Sbjct: 458 RDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNI 517
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
L EM K I+P VV Y + L + ++E + +L ++M+ G+A D TY T
Sbjct: 518 NKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTI 577
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I CK + +A EL + I E YN LIDGL
Sbjct: 578 IQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGL 616
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 172/371 (46%), Gaps = 24/371 (6%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P IL G K D + F L + L PD+ YNI+I+ + K+G V
Sbjct: 391 RIFPNSFAHSGILKGLCEKGMLSDARM-YFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEE 449
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ R+ TP+ VTF SLI G C +++EA L +++ G EP+ TY TL+N
Sbjct: 450 AVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMN 509
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
+ EG ++K EL L+M ++I P VVTYT VI+G
Sbjct: 510 A-----------------------YCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGL 546
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C E+ LL +M +G+ P+ +T+N I+ CK M +A LLD M+ + P
Sbjct: 547 CKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTP 606
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
YN L+DG C G V A + VS++ T +Y+ +I +C + + A+ ++ +
Sbjct: 607 ATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQ 666
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M+ KG + + Y+ + L + + A F M DGV+ D + ++ + +
Sbjct: 667 MVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGH 726
Query: 371 IVEAVELFRTL 381
+ EL +
Sbjct: 727 VHSVFELLAVM 737
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 194/404 (48%), Gaps = 19/404 (4%)
Query: 9 NMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV 68
N+RPS + ++N L L +H D + ++ + +G T +I+++ C R
Sbjct: 113 NLRPS---IQTYNSLLYNL---RHTDIMWDVYNDIKDSGTPQSARTSSIIVDGLCGQSRF 166
Query: 69 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTL 128
+ L + F P+ V+F +++ C A + F + +G P+ ++YN L
Sbjct: 167 RDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNIL 226
Query: 129 INGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQM-KDEN 175
I+GL G AL L +M + F + G + A+E+ +M DE
Sbjct: 227 IHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEG 286
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+ PD+VTYT +I G C + EA L +++ G Q NV+ ++V++ LCK G++DEA
Sbjct: 287 LKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEAL 346
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+LL M ++P+ Y+ L+ G C G+V +A +L+ M F++S ++ G
Sbjct: 347 QLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGL 406
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
C+ + A + ++ ++PDV +YN + ++ VE A +L+ ++ +
Sbjct: 407 CEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSI 466
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
T+ + I G CKN +VEA L ++++ E Y L++
Sbjct: 467 VTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNA 510
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 174/384 (45%), Gaps = 23/384 (5%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +++L L K D L L + + L PDL TY+ILI+ CK G+V +
Sbjct: 326 VILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYK 385
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ + PN+ + ++KGLC + + +A F L + P+V YN +I+G + G
Sbjct: 386 EMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLG 445
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
V++A L+ +++D+ I P +VT+ S+I GFC
Sbjct: 446 D-----------------------VEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKV 482
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
EA+ LL + G++P+ VT+ +M+ C+ G +++ LL M + P Y +
Sbjct: 483 VEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVV 542
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ G C ++ + +L M + G +Y+ +I +CK K++ A L +ML +
Sbjct: 543 IKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNL 602
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+P YN L L VE A ++ +Q + Y T I C AV+
Sbjct: 603 EPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVK 662
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
+F + E+ I+ Y+ +I+ L
Sbjct: 663 VFHQMVEKGFEVSIKDYSAVINRL 686
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 151/350 (43%), Gaps = 67/350 (19%)
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
VSH VL R R F + +++ A + +A + K++ P++ TYN+
Sbjct: 69 VSH---VLARKRR--FKDLRLVLDQMLQEEVASRMVHDALFVLVKMKEQNLRPSIQTYNS 123
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
L LY HT + +++ ++ KD T + ++
Sbjct: 124 L---LYNLRHTDIMWDVYNDI-----------------------KDSGTPQSARTSSIIV 157
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
G C + + +A L + + P+VV+FN IM CK G D A +M++ G+
Sbjct: 158 DGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGIL 217
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG-----CTHTVFS--------------- 287
P+ + YN L+ G + G + A EL ME G T+ + +
Sbjct: 218 PDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREI 277
Query: 288 ----------------YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
Y++LI G+C+ IE AL L ++LS G + +V++Y+ L L
Sbjct: 278 IQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLC 337
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+ QV+ A +L EM+ + + D TY I GLCK + +A++L++ +
Sbjct: 338 KRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEM 387
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 101/239 (42%), Gaps = 23/239 (9%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+N++ P V ++ ++ L K + + + L + + + GL PD TYN +I CFCK
Sbjct: 527 MNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKD 586
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ F +L +L P T+ LI GLC + +A + L+ Y T
Sbjct: 587 MRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTT 646
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
+I V+G +A ++F QM ++ + Y++VI
Sbjct: 647 MIKA-----------------------HCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVI 683
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
C NEAK M+ GV P+ F ++++ + G + LL +MI+ G+
Sbjct: 684 NRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGL 742
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 205/398 (51%), Gaps = 13/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N + K D + F+ + S PD+ TYN LINCFCK G++ G
Sbjct: 166 PDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEF 225
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ +S PN V++++L+ C E + +A + +R G PN FTY +L++ +
Sbjct: 226 YREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCK 285
Query: 135 TGHTIVALNLFEEMASGNGEFGV-------EGFVD-----KAKELFLQMKDENINPDVVT 182
G+ A L EM E+ V +G D +A++LF +M + P++ +
Sbjct: 286 IGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLAS 345
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I GF A + + A LL E+ +G+QP+++ + + LC K++ A +++ M
Sbjct: 346 YNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQ 405
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G++ N +Y TLMD + +G L M+ + TV ++ +LI+G CKNK +
Sbjct: 406 ENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVS 465
Query: 303 GALSLYGEMLSK-GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A+ +G M + G++P+ +Y + L + +QV+ A LF++M ++G+ D Y +
Sbjct: 466 KAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSL 525
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+DG K ++EA+ L + + +LD+ AY L+ G
Sbjct: 526 MDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWG 563
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 192/386 (49%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S N L AK D V FK + G P ++TYNI+I+C K G + +
Sbjct: 96 PKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGL 155
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ P+ VT+ S+I G R+ + F +++ CEP+V TYN+LIN +
Sbjct: 156 FEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCK 215
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+G + K E + +MK + P+VV+Y++++ FC +
Sbjct: 216 SGK-----------------------LPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKED 252
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+A ++M G PN T+ ++D CK G + +A RL + M+++GV N Y
Sbjct: 253 MMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYT 312
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DG C R+ A++LF M + G + SY+ LI+G+ K K ++ AL L E+ +
Sbjct: 313 ALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 372
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
GI+PD+++Y T L + ++E A + +EMQ +G+ A+T Y T +D K+ E
Sbjct: 373 GIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEG 432
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ L ++ L E+ + + LIDGL
Sbjct: 433 LHLLEEMQELDHEVTVVTFCVLIDGL 458
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 168/345 (48%), Gaps = 13/345 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S++ L K + + + G P+ +TY L++ CK+G +S F +
Sbjct: 236 PNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRL 295
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+L N VT+T+LI GLC R+ EA LF K+ G PN+ +YN LI+G +
Sbjct: 296 ANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVK 355
Query: 135 TGHTIVALNLFEEMAS----------GNGEFGVEGF--VDKAKELFLQMKDENINPDVVT 182
+ AL L E+ G +G+ G ++ AK + +M++ I + +
Sbjct: 356 AKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLI 415
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+++ + + + E LL EM + + VVTF V++D LCKN + +A M
Sbjct: 416 YTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMS 475
Query: 243 -QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
G++PNA VY ++DG C +V A LF M G +Y+ L++G K +
Sbjct: 476 NDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNM 535
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
AL+L +M G+K D++ Y +L + +Q+++A +EM
Sbjct: 536 LEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEM 580
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 127/242 (52%)
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
G +++A + F +MK + P + ++ F + K +M+ G +P V T+
Sbjct: 77 GMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTY 136
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
N+++D + K G ++ A L + M G+ P+ YN+++DG+ GR++ F M+S
Sbjct: 137 NIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKS 196
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
M C V +Y+ LIN +CK+ ++ L Y EM G+KP+VV Y+TL + +++
Sbjct: 197 MSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQ 256
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A K + +M+R G + +TY + +D CK + +A L + + E ++ Y LID
Sbjct: 257 AIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALID 316
Query: 399 GL 400
GL
Sbjct: 317 GL 318
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 92/187 (49%)
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
P F+ + L G ++EA++ M + V P N L+ F G+ + K
Sbjct: 61 PGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 120
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
F M G TVF+Y+I+I+ K +IE A L+ EM +G+ PD V YN++ +
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGK 180
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
+ +++ F+EM+ D TY + I+ CK+ + + +E +R ++ + ++ +
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVS 240
Query: 393 YNCLIDG 399
Y+ L+D
Sbjct: 241 YSTLVDA 247
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 112/280 (40%), Gaps = 54/280 (19%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S+N L K K+ D L L L G+ PDL Y I C + ++ VV
Sbjct: 341 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVV 400
Query: 75 LGRILRSCFTPNA-----------------------------------VTFTSLIKGLCA 99
+ + + N VTF LI GLC
Sbjct: 401 MNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCK 460
Query: 100 ESRIMEAAALFTKLR-VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS-------- 150
+ +A F ++ FG +PN Y +I+GL + A LFE+MA
Sbjct: 461 NKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRT 520
Query: 151 -------GNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
GN + +G + +A L +M + + D++ YTS++ GF N +A+ L
Sbjct: 521 AYTSLMDGNLK---QGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFL 577
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
EM+ + + P+ V ++ + + G +DEA L +++
Sbjct: 578 EEMIGEEILPDEVLCIGVLKKHYELGCIDEAVGLQSYLMK 617
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 132/422 (31%), Positives = 206/422 (48%), Gaps = 26/422 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTV-------LSLFKRLNSTG---LFPDL 52
+FD +L R P + + N L +A+ +V +S+F R+ G + PD+
Sbjct: 86 LFDELLQ-RARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARAGAKKVAPDI 144
Query: 53 YTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FT 111
T+ ILI+C C G ++ GF LG+I+++ AVTFT L++ LCAE R +A +
Sbjct: 145 ATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNIVLR 204
Query: 112 KLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE--------------FGV 157
++ GC P+VF+Y TL+ GL A L MA F
Sbjct: 205 RMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFK 264
Query: 158 EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
EG V KA LF +M D I P+VVT SVI G C ++A+ +L +M+D+ + PN T
Sbjct: 265 EGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTT 324
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
+N ++ +G+ EA R+L M + G RPN Y+ L+D C +G A+E+F SM
Sbjct: 325 YNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMI 384
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
G +Y L++GY + ++ M+ G++P ++N + +++
Sbjct: 385 QSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLD 444
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
A F++MQ+ G D Y T IDGLCK + +A+ F + DI +N LI
Sbjct: 445 EASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLI 504
Query: 398 DG 399
G
Sbjct: 505 HG 506
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 197/432 (45%), Gaps = 68/432 (15%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP V + N + L K + D ++ +++ + P+ TYN LI+ + G+ +
Sbjct: 284 PPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVR 343
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L + R PN VT++ LI LC EA +F + G +PN TY +L++G Y
Sbjct: 344 ILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHG-Y 402
Query: 134 RTGHTIVALNLFEEMASGNGE------FGVE----------------------------- 158
T +V +N +++ NG F +E
Sbjct: 403 ATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDI 462
Query: 159 -------------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
G +D A F QM D+ ++PD++T+ ++I GF W +A+ L E
Sbjct: 463 VAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYE 522
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
MMD+G+ PNV TFN ++D+L K GK+ EA +L DLM + G +PN YNT++ G+ + G
Sbjct: 523 MMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGE 582
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
V +L M +G T +++ L++G M+S G+KPDVV T
Sbjct: 583 VGEVMKLLDDMLLIGLKPTAVTFNTLLDG----------------MVSMGLKPDVVTCKT 626
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC-KNSYIVEAVELFRTLRIL 384
L E ++E LF EM DT T + G+ K SY +V + +L+ L
Sbjct: 627 LIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKLRGVTVKASYHCSSVVI--SLKAL 684
Query: 385 KCELDIRAYNCL 396
+ A +C+
Sbjct: 685 EVVTQAGAISCI 696
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 191/403 (47%), Gaps = 20/403 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG--LFPDLYTYNILINCFCKMGRVSHGF 72
P V S+ L L K + L + G P++ +Y +I+ F K G V +
Sbjct: 213 PDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAY 272
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+ ++L PN VT S+I GLC + +A A+ ++ PN TYN+LI+G
Sbjct: 273 TLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGY 332
Query: 133 YRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDV 180
+G A+ + +EM+ V G +A+E+F M P+
Sbjct: 333 LSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNA 392
Query: 181 VTYTSVIRGFCYAN---DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
TY S++ G+ D N K L+++ G++P FN+ + CK G++DEAS
Sbjct: 393 STYGSLLHGYATEGNLVDMNNVKDLMVQ---NGMRPGRHVFNIEIYAYCKCGRLDEASLT 449
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
+ M Q G P+ Y T++DG C GR++ A F M G + + +++ LI+G+
Sbjct: 450 FNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFAL 509
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+ + E A L+ EM+ +GI P+V +N++ LF+ +V A KLFD M R G + +
Sbjct: 510 HGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVS 569
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Y T I G + E ++L + ++ + +N L+DG+
Sbjct: 570 YNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGM 612
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 59/143 (41%), Gaps = 16/143 (11%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
Y + R PP V +FN + L K LF + G P++ +YN +I+ +
Sbjct: 521 YEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIA 580
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
G V +L +L P AVTF +L+ G+ + G +P+V T
Sbjct: 581 GEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVS----------------MGLKPDVVTC 624
Query: 126 NTLINGLYRTGHTIVALNLFEEM 148
TLI+ G L LF EM
Sbjct: 625 KTLIDSCCEDGRIEDILTLFREM 647
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 125/375 (33%), Positives = 189/375 (50%), Gaps = 20/375 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + ++ +FK + L PD YTYN I+ CK R+ V
Sbjct: 250 PNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGV 309
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++L S PNAVT+ +LI G C + + +A A ++ G +VFTYN LI+ L+
Sbjct: 310 LCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFL 369
Query: 135 TGHTIVALNLFEEMASGNGEFGVE----------------GFVDKAKELFLQMKDENINP 178
A ++ +EM E GVE G KA LF +M ++NI P
Sbjct: 370 EKRIEEAEDMIKEMR----EKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRP 425
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
V TYTS+I F N +EA+ + + +G+ P+++ FN ++D C NG +D A +LL
Sbjct: 426 TVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLL 485
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
M V P+ +NTLM G+C +V AK+L M+ G SY+ LI+GY K
Sbjct: 486 KEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKR 545
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+++ AL ++ EMLS G P ++ YN L +I + + A +L EMQ G+ D TY
Sbjct: 546 GDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTY 605
Query: 359 RTFIDGLCKNSYIVE 373
I+ + N +VE
Sbjct: 606 LYVIEAMKTNDDLVE 620
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 180/380 (47%), Gaps = 23/380 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F++L + + D L + + P T N L++ K+ ++ + V ++
Sbjct: 150 FDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMV 209
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+ + VTF +I LC E + +A + V+G +PNV TYNT+ING
Sbjct: 210 KMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVING-------- 261
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
+ + G + A ++F MKD+N+ PD TY S I C EA
Sbjct: 262 ---------------YCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEA 306
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
+L ++++ G+ PN VT+N ++D C G +D+A D M+ G+ + F YN L+
Sbjct: 307 SGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHA 366
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
L R+ A+++ M G V +Y+I INGYC+ + ALSL+ EM+ K I+P
Sbjct: 367 LFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPT 426
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
V Y +L V + +++ A + F + ++G+ D + IDG C N I A +L +
Sbjct: 427 VETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLK 486
Query: 380 TLRILKCELDIRAYNCLIDG 399
+ K D +N L+ G
Sbjct: 487 EMDNAKVVPDEVTFNTLMQG 506
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 155/325 (47%), Gaps = 12/325 (3%)
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
+ F L+ C + EA ++ P T N+L++ L + +A ++E
Sbjct: 147 TLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYE 206
Query: 147 EMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
EM N + + EG KAK+ M+ + P+VVTY +VI G+C
Sbjct: 207 EMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRG 266
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ A + M D+ ++P+ T+N + LCK +++EAS +L +++ G+ PNA YN
Sbjct: 267 KFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYN 326
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DG C G +++A M + G +VF+Y++LI+ K IE A + EM K
Sbjct: 327 ALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREK 386
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G++PDVV YN ++A LFDEM + TY + ID K + + EA
Sbjct: 387 GVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEA 446
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
E F+ DI +N LIDG
Sbjct: 447 EEKFKKSIKEGMLPDIIMFNALIDG 471
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 201/396 (50%), Gaps = 25/396 (6%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ M++ P C FN L + + ++ S F N + + D+Y++ ILI C
Sbjct: 117 FNEMVDNGFVPGSNC-FNYLLTFVVGSSSFNQWWSFFNE-NKSKVVLDVYSFGILIKGCC 174
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ G + F +L + F+PN V +T+LI G C + I +A LF ++ G N
Sbjct: 175 EAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANER 234
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
TY LINGL++ G +GF E++ +M+++ + P++ TY
Sbjct: 235 TYTVLINGLFKNG------------------VKKQGF-----EMYEKMQEDGVFPNLYTY 271
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
V+ C +A + EM ++GV N+VT+N ++ LC+ K++EA++++D M
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS 331
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G+ PN YNTL+DGFC G++ +A L ++S G + ++ +Y+IL++G+C+ + G
Sbjct: 332 DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSG 391
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A + EM +GIKP V Y L +E+A +L M+ G+ D TY I
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIH 451
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G C + EA LF+++ CE + YN +I G
Sbjct: 452 GFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILG 487
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 173/337 (51%), Gaps = 23/337 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ +L L KN +++++ G+FP+LYTYN ++N CK GR F V +
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ N VT+ +LI GLC E ++ EA + +++ G PN+ TYNTLI+G
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGF------ 348
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
G G+ G KA L +K ++P +VTY ++ GFC D +
Sbjct: 349 -----------CGVGKLG------KALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSG 391
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A ++ EM ++G++P+ VT+ +++D ++ M++A +L M ++G+ P+ Y+ L+
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIH 451
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
GFC+ G++N A LF SM C Y+ +I GYCK AL L EM K + P
Sbjct: 452 GFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAP 511
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
+V Y + VL + + + A +L ++M G+ T
Sbjct: 512 NVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 104/218 (47%), Gaps = 1/218 (0%)
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I + + N + EM+D G P FN ++ + + ++ +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN- 155
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ V + + + L+ G C G + ++ +L + + G + V Y+ LI+G CK EIE
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ EM G+ + Y L LF+ ++ F+++++MQ DGV + +TY +
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ LCK+ +A ++F +R +I YN LI GL
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P ++ IL A++ + + + L + GL PD++TY++LI+ FC G+++
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ ++ PN V + ++I G C E A L ++ PNV +Y +I
Sbjct: 462 ASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIE 521
Query: 131 GLYRTGHTIVALNLFEEM 148
L + + A L E+M
Sbjct: 522 VLCKERKSKEAERLVEKM 539
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 45/108 (41%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++++L + LFK + P+ YN +I +CK G +
Sbjct: 441 PDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKL 500
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
L + PN ++ +I+ LC E + EA L K+ G +P+
Sbjct: 501 LKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 196/395 (49%), Gaps = 12/395 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V + NI+ L K+ D V + G+F D+ TYN LIN +C+ G + F V+
Sbjct: 185 VYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMN 244
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ P T+ ++I GLC + R + A +F ++ G P+ TYNTL+ R
Sbjct: 245 SMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNN 304
Query: 137 HTIVALNLFEEM------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
+ + A ++F +M +S G G +D+A F MK + PD V YT
Sbjct: 305 NFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYT 364
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+I G+C +EA + +M++QG +VV +N I++ LCK + +A+ L D M++
Sbjct: 365 ILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVER 424
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
GV P+ + TL+ G C G + +A LF M + +Y+ILI+G+CK E+E A
Sbjct: 425 GVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKA 484
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L+ EM+S+ I P+ + Y L + V AF+L+DEM R G+ T T I G
Sbjct: 485 NELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKG 544
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
C++ + +A E + D YN LI+G
Sbjct: 545 YCRSGDLSKADEFLGKMISEGVGPDSITYNTLING 579
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 191/372 (51%), Gaps = 24/372 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF ML+ R P + SF+ L G ++N H D L F+ + ++GL PD Y ILIN +
Sbjct: 312 IFSDMLH-RGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGY 370
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ G +S + ++L + V + +++ GLC + + +A ALF ++ G P+
Sbjct: 371 CRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDF 430
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
T+ TLI+G + EG + KA LF M +NI PD+VT
Sbjct: 431 CTFTTLIHGHCK-----------------------EGNMGKALSLFGIMTQKNIKPDIVT 467
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I GFC + +A L EM+ + + PN +++ ++++ C G + EA RL D MI
Sbjct: 468 YNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMI 527
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G++P NT++ G+C +G +++A E M S G +Y+ LING+ K + ++
Sbjct: 528 RKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMD 587
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L +M +KG++PDVV YN + +++ A + +M G+ D TY T I
Sbjct: 588 KAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLI 647
Query: 363 DGLCKNSYIVEA 374
+G + EA
Sbjct: 648 NGYVSQDNLKEA 659
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 191/397 (48%), Gaps = 12/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N + L K Y +F + S GL PD TYN L+ C+ +
Sbjct: 253 PTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDI 312
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+L +P+ ++F+SLI + +A F ++ G P+ Y LING R
Sbjct: 313 FSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCR 372
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
G AL + ++M V + + A LF +M + + PD T
Sbjct: 373 NGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCT 432
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+T++I G C + +A L M + ++P++VT+N+++D CK +M++A+ L + MI
Sbjct: 433 FTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMI 492
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ PN Y L++G+C G V+ A L+ M G T+ + + +I GYC++ ++
Sbjct: 493 SRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLS 552
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A G+M+S+G+ PD + YNTL + +++AF L ++M+ G+ D TY +
Sbjct: 553 KADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVIL 612
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+G C+ + EA + R + + D Y LI+G
Sbjct: 613 NGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLING 649
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 171/380 (45%), Gaps = 23/380 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F++L + + + FK L G + N L+ KMG V + V I
Sbjct: 118 FDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIA 177
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
RS N T ++ LC + +I + + G ++ TYNTLIN R
Sbjct: 178 RSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCR----- 232
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
EG + +A E+ M + + P + TY +VI G C + A
Sbjct: 233 ------------------EGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRA 274
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
K + EM+ G+ P+ T+N ++ E C+N EA + M+ GV P+ +++L+
Sbjct: 275 KGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGV 334
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
G +++A F M++ G Y+ILINGYC+N + AL + +ML +G D
Sbjct: 335 SSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALD 394
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
VV YNT+ L + + A LFDEM GV D T+ T I G CK + +A+ LF
Sbjct: 395 VVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFG 454
Query: 380 TLRILKCELDIRAYNCLIDG 399
+ + DI YN LIDG
Sbjct: 455 IMTQKNIKPDIVTYNILIDG 474
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 158/320 (49%), Gaps = 24/320 (7%)
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
+C N V F LI+ ++ E F LR G ++ N+L+ GL + G
Sbjct: 110 TCGVDNLV-FDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMG---- 164
Query: 141 ALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
+VD A E++ ++ I +V T ++ C + ++ K
Sbjct: 165 -------------------WVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVK 205
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
LI+M +G+ ++VT+N +++ C+ G + EA +++ M G++P F YN +++G
Sbjct: 206 PFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGL 265
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
C GR RAK +F M S+G + +Y+ L+ C+N A ++ +ML +G+ PD+
Sbjct: 266 CKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDL 325
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
+ +++L V +++A F +M+ G+ D Y I+G C+N + EA+E+
Sbjct: 326 ISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDK 385
Query: 381 LRILKCELDIRAYNCLIDGL 400
+ C LD+ AYN +++GL
Sbjct: 386 MLEQGCALDVVAYNTILNGL 405
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 124/379 (32%), Positives = 192/379 (50%), Gaps = 17/379 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S N L L K + ++K + + P+L T+NI IN CK G+++ V+ I
Sbjct: 167 SCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDI 226
Query: 79 LRSCFTPNAVTFTSLIKGLC---AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRT 135
F+PN VT+ +LI G C + ++ A A+ ++ PN T+NTLI+G +
Sbjct: 227 KAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKD 286
Query: 136 GHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+ + A N FEEM NG G +D+A L+ +M + P++VT
Sbjct: 287 ENVLAAKNAFEEMQRQGLKPNIVTYNSLING-LSNNGKLDEAIALWDKMVGLGLKPNIVT 345
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ ++I GFC EA+ L ++ +Q + PN +TFN ++D CK G M+E L + M+
Sbjct: 346 FNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSML 405
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ PN YN L+ G C V AK+L ME+ V +Y+ILI G+CK+ E
Sbjct: 406 DEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPS 465
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L GEML+ G+KP+ V YNTL ++ A K+ +M+++G A+ TY I
Sbjct: 466 KAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLI 525
Query: 363 DGLCKNSYIVEAVELFRTL 381
G CK + +A L +
Sbjct: 526 KGFCKTGKLEDANRLLNEM 544
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 185/373 (49%), Gaps = 52/373 (13%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P + +FNI L K + + + + + G P++ TYN LI+ CK G
Sbjct: 194 RRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGK 253
Query: 71 GF---VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ +L +L + PN +TF +LI G C + ++ A F +++ G +PN+ TYN+
Sbjct: 254 MYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNS 313
Query: 128 LINGLYRTGHTIVALNLFEEM-------------ASGNGEFGVEGFVDKAKELFLQMKDE 174
LINGL G A+ L+++M A NG F + + +A++LF + ++
Sbjct: 314 LINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALING-FCKKKMIKEARKLFDDIAEQ 372
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNV------------------- 215
++ P+ +T+ ++I FC A E L M+D+G+ PNV
Sbjct: 373 DLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAA 432
Query: 216 ----------------VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
VT+N+++ CK+G+ +A +LL M+ +GV+PN YNTLMDG
Sbjct: 433 KKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDG 492
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
+C+ G + A ++ ME G V +Y++LI G+CK ++E A L EML KG+ P+
Sbjct: 493 YCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPN 552
Query: 320 VVIYNTLFVVLFE 332
Y+ + + + E
Sbjct: 553 RTTYDVVRLEMLE 565
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 176/361 (48%), Gaps = 20/361 (5%)
Query: 39 LFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 98
+F+R+ G L + N L++ K V +++ PN TF I GLC
Sbjct: 152 VFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLC 211
Query: 99 AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE 158
++ +A + ++ +G PN+ TYNTLI+G + G
Sbjct: 212 KAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSA-------------------- 251
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
G + +A + +M I P+ +T+ ++I GFC + AK EM QG++PN+VT+
Sbjct: 252 GKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTY 311
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
N +++ L NGK+DEA L D M+ +G++PN +N L++GFC + A++LF +
Sbjct: 312 NSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAE 371
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
+++ +I+ +CK +E +L+ ML +GI P+V YN L L V
Sbjct: 372 QDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRA 431
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A KL +EM+ + AD TY I G CK+ +A +L + + + + YN L+D
Sbjct: 432 AKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMD 491
Query: 399 G 399
G
Sbjct: 492 G 492
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 172/377 (45%), Gaps = 44/377 (11%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
LA +K Y V S +L + N + V H ++ G R C N
Sbjct: 88 LANSKKYSKVRSFLDKL--------------VKNEKHTVSSVFHSLLLGGD--RPC--AN 129
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
A+ L+ I A +F +++ +G + ++ + N L++ L + T
Sbjct: 130 ALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNET-------- 181
Query: 147 EMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
GE + ++ +M I P++ T+ I G C A N+A+ ++ ++
Sbjct: 182 ------GEM---------QYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDI 226
Query: 207 MDQGVQPNVVTFNVIMDELCKNG---KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
G PN+VT+N ++D CK G KM A +L M+ + PN +NTL+DGFC
Sbjct: 227 KAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKD 286
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
V AK F M+ G + +Y+ LING N +++ A++L+ +M+ G+KP++V +
Sbjct: 287 ENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTF 346
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
N L + ++ A KLFD++ + + T+ T ID CK + E L ++
Sbjct: 347 NALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLD 406
Query: 384 LKCELDIRAYNCLIDGL 400
++ YNCLI GL
Sbjct: 407 EGIFPNVSTYNCLIAGL 423
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 107/227 (47%), Gaps = 12/227 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +FN L K K LF + L P+ T+N +I+ FCK G + GF +
Sbjct: 341 PNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFAL 400
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+L PN T+ LI GLC + A L ++ + + +V TYN LI G +
Sbjct: 401 HNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCK 460
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
G A L EM + + + +EG + A ++ QM+ E +VVT
Sbjct: 461 DGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVT 520
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
Y +I+GFC +A LL EM+++G+ PN T++V+ E+ + G
Sbjct: 521 YNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKG 567
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 112/361 (31%), Positives = 188/361 (52%), Gaps = 24/361 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M + P V +++ G K + +F + GL PD TY LI+ +
Sbjct: 369 LFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEA-REMFNEMLVKGLEPDEVTYTALIDGY 427
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G + F V ++++ TPN VT+T+L GLC I A L ++ G +PNV
Sbjct: 428 CKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNV 487
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+TYNT++NGL + G+ + L EEM + GF PD +T
Sbjct: 488 YTYNTIVNGLCKIGNIEQTVKLMEEM-------DLAGFY----------------PDTIT 524
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+++ +C + +A LL M+++ +QP +VTFNV+M+ C +G +++ RL++ M+
Sbjct: 525 YTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWML 584
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ PNA +N+LM +C+ + E++ +M G +Y+ILI G+CK + ++
Sbjct: 585 EKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMK 644
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ EM+ KG Y+ L ++ + A KLF+EM++ G+ A+ Y F+
Sbjct: 645 EAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFV 704
Query: 363 D 363
D
Sbjct: 705 D 705
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 186/380 (48%), Gaps = 23/380 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+N + L KN L + + G+FPD Y +I+ FCK+G VS + +
Sbjct: 315 YNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMR 374
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
R P+ VT+TS+I G+C +++EA +F ++ V G EP+ TY LI+G + G
Sbjct: 375 RKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAG--- 431
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
EM F V QM + + P+VVTYT++ G C + + A
Sbjct: 432 -------EMKEA---FSVHN----------QMVQKGLTPNVVTYTALADGLCKNGEIDVA 471
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
LL EM +G+QPNV T+N I++ LCK G +++ +L++ M G P+ Y TLMD
Sbjct: 472 NELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDA 531
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
+C G + +A EL M + T+ ++++L+NG+C + +E L ML KGI P+
Sbjct: 532 YCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPN 591
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
+N+L + + +++ M GV D+ TY I G CK + EA L +
Sbjct: 592 ATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHK 651
Query: 380 TLRILKCELDIRAYNCLIDG 399
+ + Y+ LI G
Sbjct: 652 EMVEKGYSVTAATYDALIRG 671
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 183/366 (50%), Gaps = 23/366 (6%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
D VL L L GL PD Y YN +I CK G V +L + + P+ V +T++
Sbjct: 294 DKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTV 353
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG 153
I G C + A LF ++R P++ TY ++I+G+ ++G +
Sbjct: 354 ISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMV-------------- 399
Query: 154 EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
+A+E+F +M + + PD VTYT++I G+C A + EA + +M+ +G+ P
Sbjct: 400 ---------EAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTP 450
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
NVVT+ + D LCKNG++D A+ LL M + G++PN + YNT+++G C G + + +L
Sbjct: 451 NVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLM 510
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
M+ G +Y+ L++ YCK E+ A L ML+K ++P +V +N L
Sbjct: 511 EEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMS 570
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
+E +L + M G+ + T+ + + C + + E+++ + D Y
Sbjct: 571 GMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTY 630
Query: 394 NCLIDG 399
N LI G
Sbjct: 631 NILIKG 636
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 183/363 (50%), Gaps = 23/363 (6%)
Query: 37 LSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 96
+ +F+ G+ + + NI+++C C++G+V +L ++ P+ V++ ++ G
Sbjct: 227 VKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSG 286
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG 156
C + + L +L+ G +P+ + YN +I L + G +
Sbjct: 287 YCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVV----------------- 329
Query: 157 VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
+A++L M+ + PD V YT+VI GFC + + A L EM + + P++V
Sbjct: 330 ------EAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIV 383
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
T+ ++ +CK+GKM EA + + M+ G+ P+ Y L+DG+C G + A + M
Sbjct: 384 TYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQM 443
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
G T V +Y+ L +G CKN EI+ A L EM KG++P+V YNT+ L +I +
Sbjct: 444 VQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNI 503
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
E+ KL +EM G DT TY T +D CK + +A EL R + + + + +N L
Sbjct: 504 EQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVL 563
Query: 397 IDG 399
++G
Sbjct: 564 MNG 566
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 184/372 (49%), Gaps = 26/372 (6%)
Query: 51 DLYTYNILINCFCKMGR--VSHGFVVLGRILRSCFT---PNAVTFTSLIKGLCAESRIME 105
D+ T L+ FC + VS F + +L + + + F + L ++E
Sbjct: 130 DIQTAKRLVFEFCAKPKIDVSKSFHLFTEMLIYTYKDWGSHPLVFDLYFQVLVENGFVLE 189
Query: 106 AAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI-VALNLFEEMASGNGEFGV------- 157
A LF KL +G +V + N ++ L I +A+ +FEE E GV
Sbjct: 190 AQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFP----ELGVCWNTVSC 245
Query: 158 ---------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD 208
G V +A L +QM D PDVV+Y V+ G+C + ++ L+ E+
Sbjct: 246 NIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKG 305
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
+G++P+ +N I+ LCKNG++ EA +LL M + GV P+ VY T++ GFC G V+
Sbjct: 306 KGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSA 365
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
A +LF M + +Y+ +I+G CK+ ++ A ++ EML KG++PD V Y L
Sbjct: 366 ACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALID 425
Query: 329 VLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
+ +++ AF + ++M + G+ + TY DGLCKN I A EL + +
Sbjct: 426 GYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQP 485
Query: 389 DIRAYNCLIDGL 400
++ YN +++GL
Sbjct: 486 NVYTYNTIVNGL 497
>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
Length = 455
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 181/343 (52%), Gaps = 23/343 (6%)
Query: 58 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 117
+++ + G +S +L ++ + +PN F I +A +F K+R G
Sbjct: 1 MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60
Query: 118 CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENIN 177
P+ +Y LI+ L + G VD A+ F QM +E +
Sbjct: 61 LSPDAVSYGALIDALCKLGR-----------------------VDDAEVKFNQMINEGVT 97
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P++V ++S++ G C + W + + L EM++ G+ PN+V FN I+ LCK G++ E RL
Sbjct: 98 PNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRL 157
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
+D + +GVRP+ YNTL+DG CL G ++ A +L M S+G FSY+ L++GYCK
Sbjct: 158 VDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCK 217
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
I+ A SL+ +MLS GI P VV YNT+ LF+ + A +L+ M G +T
Sbjct: 218 AGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYT 277
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Y T ++GLCK++ + EA ++F++L +L+I + +I L
Sbjct: 278 YNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGAL 320
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 182/363 (50%), Gaps = 23/363 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FNI F AK D + +F ++ GL PD +Y LI+ CK+GRV V +++
Sbjct: 33 FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMI 92
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
TPN V F+SL+ GLC+ + + LF ++ G PN+ +NT++ L +
Sbjct: 93 NEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCK----- 147
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
EG V + + L ++ + PDV++Y ++I G C A +EA
Sbjct: 148 ------------------EGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEA 189
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
LL M+ G++PN ++N ++ CK G++D A L M+ G+ P YNT++ G
Sbjct: 190 SKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHG 249
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
T R + AKEL+++M + G +++Y+ ++NG CK+ ++ A ++ + SKG++ +
Sbjct: 250 LFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLN 309
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
++ + + L + + E A LF + +G+ D TYR + L + + E LF
Sbjct: 310 IITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFS 369
Query: 380 TLR 382
+
Sbjct: 370 AME 372
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 185/356 (51%), Gaps = 23/356 (6%)
Query: 45 STGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 104
+ G+ P+ + +NI + + K G + + ++ + +P+AV++ +LI LC R+
Sbjct: 23 ANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGRVD 82
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKA 164
+A F ++ G PN+ +++L+ GL +++ +E K
Sbjct: 83 DAEVKFNQMINEGVTPNIVVFSSLVYGL-------CSIDKWE----------------KV 119
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
+ELF +M + I+P++V + +++ C E + L+ + GV+P+V+++N ++D
Sbjct: 120 EELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDG 179
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
C G +DEAS+LL+ M+ +G++PN+F YNTL+ G+C GR++ A LF M S G T
Sbjct: 180 HCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPG 239
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
V +Y+ +++G + K A LY M++ G K + YNT+ L + + V+ AFK+F
Sbjct: 240 VVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQ 299
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ G+ + T+ I L K +A++LF + D+ Y + + L
Sbjct: 300 SLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENL 355
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 187/386 (48%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +FN L G L +N ++ V + +++ G PD+ Y +I+ CK G + +
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R+ PN V + +++KGLC+ R EA L +++ C + T+N L++
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF--- 365
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
F G VD+ EL QM PDV+TYT+VI GFC
Sbjct: 366 --------------------FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+EA LL M G +PN V++ +++ LC G+ +A L+ MIQ G PN +N
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFN 465
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL++ C G V +A EL M GC+ + SYS +I+G K + E AL L M++K
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNK 525
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
GI P+ +IY+++ L +V + ++FD ++ + +D Y I LCK A
Sbjct: 526 GISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRA 585
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
++ F + C + Y LI GL
Sbjct: 586 IDFFAYMVSNGCMPNESTYTMLIKGL 611
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 192/385 (49%), Gaps = 21/385 (5%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P PP ++++ ++ + + + + +++ G D N+++N C+ G V
Sbjct: 144 PIPP---MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEA 200
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI-- 129
+L ++ + V++ +++KGLC R + L ++ C PN+ T+NTLI
Sbjct: 201 VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260
Query: 130 ---NGLYRTGHTIVA----------LNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI 176
NGL+ H ++A + ++ + G EG ++ A E+ +M +
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDG---ICKEGHLEVANEILNRMPSYGL 317
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
P+VV Y +V++G C A W EA+ LL EM + + VTFN+++D C+NG +D
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE 377
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
LL+ M+ G P+ Y T+++GFC G ++ A L SM S GC SY+I++ G C
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLC 437
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
A L +M+ +G P+ V +NTL L + VE+A +L +M +G + D
Sbjct: 438 SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 497
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTL 381
+Y T IDGL K EA+EL +
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVM 522
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 172/359 (47%), Gaps = 15/359 (4%)
Query: 54 TYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL 113
YN ++ +C+ G+++ + + PNA TF +++GLC RI +A + ++
Sbjct: 81 AYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137
Query: 114 RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS-------GNGEFGV-----EGFV 161
GC P Y+ ++ R+G ++ + E M + GN + +G V
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
D+A L ++ D+V+Y +V++G C A W + + L+ EM+ PN+VTFN +
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
+ LC+NG + +L M + G P+ +Y T++DG C G + A E+ M S G
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
V Y+ ++ G C + + A L EM K D V +N L + V+R +
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE 377
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
L ++M G D TY T I+G CK I EAV L +++ C+ + +Y ++ GL
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 151/297 (50%), Gaps = 23/297 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+FNIL +N D V+ L +++ S G PD+ TY +IN FCK G + ++L +
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PN V++T ++KGLC+ R ++A L +++ GC PN T+NTLIN L +
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK---- 473
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+G V++A EL QM +PD+++Y++VI G A E
Sbjct: 474 -------------------KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 514
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A LL M+++G+ PN + ++ I L + G++++ ++ D + +R +A +YN ++
Sbjct: 515 ALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVIS 574
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
C +RA + F M S GC +Y++LI G + A L E+ S+G
Sbjct: 575 SLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 138/349 (39%), Gaps = 41/349 (11%)
Query: 92 SLIKGLCAESRIM-----------------------------EAAALFTKLRVFGCEPNV 122
+LI+ LC+ R + AA PN
Sbjct: 52 ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNA 111
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMA-SGNGEFGV-----------EGFVDKAKELFLQ 170
+T+ ++ GL G AL + +EM+ G G + +
Sbjct: 112 YTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEA 171
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + D V+ C +EA LL ++ G + ++V++N ++ LC +
Sbjct: 172 MHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ L+D M+++ PN +NTL+ C G R E+ M GCT + Y+
Sbjct: 232 WGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYAT 291
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+I+G CK +E A + M S G+KP+VV YNT+ L + + A +L EM +
Sbjct: 292 IIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
D T+ +D C+N + +EL + C D+ Y +I+G
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVING 400
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 81/198 (40%), Gaps = 23/198 (11%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP +FN L L K + + L K++ G PDL +Y+ +I+ K G+
Sbjct: 458 PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 517
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L ++ +PN + ++S+ L E R+ + +F ++ + YN +I+ L
Sbjct: 518 LLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLC 577
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ T D+A + F M P+ TYT +I+G
Sbjct: 578 KRWET-----------------------DRAIDFFAYMVSNGCMPNESTYTMLIKGLASE 614
Query: 194 NDWNEAKCLLIEMMDQGV 211
EA+ LL E+ +G
Sbjct: 615 GLAKEAQELLSELCSRGA 632
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 111/360 (30%), Positives = 190/360 (52%), Gaps = 23/360 (6%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F Y ++ R P V ++ + + LF + GL PD T+ LIN +C
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K G + F V ++++ +PN VT+T+LI GLC E + A L ++ G +PN+F
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
TYN+++NGL ++G+ A+ L GEF G +N D VTY
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLV-------GEFEAAG----------------LNADTVTY 529
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
T+++ +C + + ++A+ +L EM+ +G+QP +VTFNV+M+ C +G +++ +LL+ M+
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G+ PNA +N+L+ +C+ + A ++ M S G +Y L+ G+CK + ++
Sbjct: 590 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 649
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A L+ EM KG V Y+ L + + A ++FD+M+R+G+AAD + F D
Sbjct: 650 AWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 198/406 (48%), Gaps = 12/406 (2%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++ ++ P V S++ + + D V L + + GL P+ Y Y +I C++
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+++ ++R P+ V +T+LI G C I A+ F ++ P+V TY
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDE 174
+I+G + G + A LF EM E + G + A + M
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
+P+VVTYT++I G C D + A LL EM G+QPN+ T+N I++ LCK+G ++EA
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+L+ G+ + Y TLMD +C +G +++A+E+ M G T+ ++++L+NG
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
+C + +E L ML+KGI P+ +N+L + ++ A ++ +M GV D
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY + G CK + EA LF+ ++ + + Y+ LI G
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 676
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 171/355 (48%), Gaps = 12/355 (3%)
Query: 40 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
F + G+ PD Y LI+ FCK G + + TP+ +T+T++I G C
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV-- 157
++EA LF ++ G EP+ T+ LING + GH A + M V
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 158 ----------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
EG +D A EL +M + P++ TY S++ G C + + EA L+ E
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
G+ + VT+ +MD CK+G+MD+A +L M+ G++P +N LM+GFCL G +
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
++L M + G +++ L+ YC ++ A ++Y +M S+G+ PD Y L
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
+ ++ A+ LF EM+ G + TY I G K +EA E+F +R
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 186/375 (49%), Gaps = 12/375 (3%)
Query: 35 TVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 94
T + +F+ G+ ++ +YNI+I+ C++GR+ +L + +TP+ +++++++
Sbjct: 229 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 95 KGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN-- 152
G C + + L ++ G +PN + Y ++I L R A F EM
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 153 ----------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
F G + A + F +M +I PDV+TYT++I GFC D EA L
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
EM +G++P+ VTF +++ CK G M +A R+ + MIQ G PN Y TL+DG C
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G ++ A EL M +G +F+Y+ ++NG CK+ IE A+ L GE + G+ D V
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
Y TL + ++++A ++ EM G+ T+ ++G C + + + +L +
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 383 ILKCELDIRAYNCLI 397
+ +N L+
Sbjct: 589 AKGIAPNATTFNSLV 603
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 161/311 (51%), Gaps = 13/311 (4%)
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGL----YRTGHTIVALNLFEEM------ASGN 152
+ EA +F K+ +G +V + N + L Y+T I+ F E+ AS N
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 153 G--EFGVE-GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
F + G + +A L L M+ + PDV++Y++V+ G+C + ++ L+ M +
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
G++PN + I+ LC+ K+ EA MI+ G+ P+ VY TL+DGFC G + A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
+ F M S T V +Y+ +I+G+C+ ++ A L+ EM KG++PD V + L
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
+ ++ AF++ + M + G + + TY T IDGLCK + A EL + + + +
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 390 IRAYNCLIDGL 400
I YN +++GL
Sbjct: 491 IFTYNSIVNGL 501
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 107/241 (44%), Gaps = 12/241 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N + L K+ + + + L + GL D TY L++ +CK G + +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L P VTF L+ G C + + L + G PN T+N+L+
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 135 TGHTIVALNLFEEMAS-GNGEFG------VEGF-----VDKAKELFLQMKDENINPDVVT 182
+ A ++++M S G G G V+G + +A LF +MK + + V T
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+ +I+GF + EA+ + +M +G+ + F+ D K + D +D +I
Sbjct: 669 YSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEII 728
Query: 243 Q 243
+
Sbjct: 729 E 729
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 178/349 (51%), Gaps = 27/349 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L L K + L + + +G PD++TY LI FCK + V
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPNVFTYNTLINGLY 133
+++ F P+ VT++ LI GLC E R+ EA LF ++ G C PN TYN+LI+G
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
R G A+NL E MA + +PDVVTYT+++ GFC
Sbjct: 172 RMGKMDEAMNLLERMA-----------------------ETGSSPDVVTYTTLMNGFCKL 208
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
++A LL +M +G+ PNVVTF +MD LC+ ++ +A +L M + P + Y
Sbjct: 209 ARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTY 268
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
NT++DG+C ++ A++ +E M C V S++I+I G CK A+ L E
Sbjct: 269 NTILDGYCRVNQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARR 326
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM-QRDGVAADTWTYRTF 361
+ PDVV+Y T+ VL +V+ A +++ +M + G ++ TY TF
Sbjct: 327 RRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYSTF 375
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 169/332 (50%), Gaps = 24/332 (7%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
P TYN LI+ CK R S + +L ++ S P+ T+T+LI G C + +A +
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL 169
F +L G P+V TY+ LI+GL + G A++LF M
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRM--------------------- 150
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+K + P+ VTY S+I GFC +EA LL M + G P+VVT+ +M+ CK
Sbjct: 151 -IKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLA 209
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
++D+A LL+ M + G+ PN + +LMDG C R++ A + M C+ TV++Y+
Sbjct: 210 RLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYN 269
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
+++GYC+ ++E A E + P+VV +N + L ++++ A +L +E +R
Sbjct: 270 TILDGYCRVNQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRR 327
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
D Y T ID LC+ + EA ++R +
Sbjct: 328 RCNPDVVMYTTVIDVLCREKKVDEACRVYRKM 359
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 129/230 (56%), Gaps = 1/230 (0%)
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
++D P VTY S+I G C A +EA LL EM+ G P++ T+ ++ CK+ K
Sbjct: 45 VQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 104
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMGCTHTVFSYS 289
D+A R+ + ++ G RP+ Y+ L+DG C GR+ A +LF M +S C +Y+
Sbjct: 105 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 164
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
LI+G+C+ +++ A++L M G PDVV Y TL ++ +++ A+ L ++M R
Sbjct: 165 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 224
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G+ + T+ + +DGLC+ + + +AV + +R C + YN ++DG
Sbjct: 225 GLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDG 274
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 132/254 (51%), Gaps = 26/254 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ P ++N L + D ++L +R+ TG PD+ TY L+N F
Sbjct: 146 LFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGF 205
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK+ R+ + +L ++ R TPN VTFTSL+ GLC E+R+ +A + ++R C P V
Sbjct: 206 CKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTV 265
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+TYNT+++G R +N EE A++ L+ D P+VV+
Sbjct: 266 YTYNTILDGYCR-------VNQLEE----------------ARKFMLEEMD--CPPNVVS 300
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ +IRG C N +EA L+ E + P+VV + ++D LC+ K+DEA R+ M+
Sbjct: 301 FNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKML 360
Query: 243 -QIGVRPNAFVYNT 255
+ G PN+ Y+T
Sbjct: 361 EEPGCLPNSITYST 374
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 1/206 (0%)
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W + + D P VT+N ++ LCK + EA LL+ M+ G P+ F Y T
Sbjct: 35 WPGRRGCGAAVQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTT 94
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L+ GFC + + + A +F + + G V +YS LI+G CK ++ A+ L+G M+ G
Sbjct: 95 LITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG 154
Query: 316 -IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
P+ V YN+L + +++ A L + M G + D TY T ++G CK + + +A
Sbjct: 155 SCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDA 214
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+L + ++ + L+DGL
Sbjct: 215 YDLLNQMTRKGLTPNVVTFTSLMDGL 240
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 187/386 (48%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +FN L G L +N ++ V + +++ G PD+ Y +I+ CK G + +
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R+ PN V + +++KGLC+ R EA L +++ C + T+N L++
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF--- 365
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
F G VD+ EL QM PDV+TYT+VI GFC
Sbjct: 366 --------------------FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+EA LL M G +PN V++ +++ LC G+ +A L+ MIQ G PN +N
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFN 465
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL++ C G V +A EL M GC+ + SYS +I+G K + E AL L M++K
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNK 525
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
GI P+ +IY+++ L +V + ++FD ++ + +D Y I LCK A
Sbjct: 526 GISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRA 585
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
++ F + C + Y LI GL
Sbjct: 586 IDFFAYMVSNGCMPNESTYTMLIKGL 611
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 192/385 (49%), Gaps = 21/385 (5%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P PP ++++ ++ + + + + +++ G D N+++N C+ G V
Sbjct: 144 PIPP---MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEA 200
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI-- 129
+L ++ + V++ +++KGLC R + L ++ C PN+ T+NTLI
Sbjct: 201 VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260
Query: 130 ---NGLYRTGHTIVA----------LNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI 176
NGL+ H ++A + ++ + G EG ++ A E+ +M +
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDG---ICKEGHLEVANEILNRMPSYGL 317
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
P+VV Y +V++G C A W EA+ LL EM + + VTFN+++D C+NG +D
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE 377
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
LL+ M+ G P+ Y T+++GFC G ++ A L SM S GC SY+I++ G C
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLC 437
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
A L +M+ +G P+ V +NTL L + VE+A +L +M +G + D
Sbjct: 438 SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 497
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTL 381
+Y T IDGL K EA+EL +
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVM 522
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 172/359 (47%), Gaps = 15/359 (4%)
Query: 54 TYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL 113
YN ++ +C+ G+++ + + PNA TF +++GLC RI +A + ++
Sbjct: 81 AYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137
Query: 114 RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS-------GNGEFGV-----EGFV 161
GC P Y+ ++ R+G ++ + E M + GN + +G V
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
D+A L ++ D+V+Y +V++G C A W + + L+ EM+ PN+VTFN +
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
+ LC+NG + +L M + G P+ +Y T++DG C G + A E+ M S G
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
V Y+ ++ G C + + A L EM K D V +N L + V+R +
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE 377
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
L ++M G D TY T I+G CK I EAV L +++ C+ + +Y ++ GL
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 151/297 (50%), Gaps = 23/297 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+FNIL +N D V+ L +++ S G PD+ TY +IN FCK G + ++L +
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PN V++T ++KGLC+ R ++A L +++ GC PN T+NTLIN L +
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK---- 473
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+G V++A EL QM +PD+++Y++VI G A E
Sbjct: 474 -------------------KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 514
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A LL M+++G+ PN + ++ I L + G++++ ++ D + +R +A +YN ++
Sbjct: 515 ALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVIS 574
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
C +RA + F M S GC +Y++LI G + A L E+ S+G
Sbjct: 575 SLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 138/349 (39%), Gaps = 41/349 (11%)
Query: 92 SLIKGLCAESRIM-----------------------------EAAALFTKLRVFGCEPNV 122
+LI+ LC+ R + AA PN
Sbjct: 52 ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNA 111
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMA-SGNGEFGV-----------EGFVDKAKELFLQ 170
+T+ ++ GL G AL + +EM+ G G + +
Sbjct: 112 YTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEA 171
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + D V+ C +EA LL ++ G + ++V++N ++ LC +
Sbjct: 172 MHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ L+D M+++ PN +NTL+ C G R E+ M GCT + Y+
Sbjct: 232 WGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYAT 291
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+I+G CK +E A + M S G+KP+VV YNT+ L + + A +L EM +
Sbjct: 292 IIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
D T+ +D C+N + +EL + C D+ Y +I+G
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVING 400
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 81/198 (40%), Gaps = 23/198 (11%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP +FN L L K + + L K++ G PDL +Y+ +I+ K G+
Sbjct: 458 PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 517
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L ++ +PN + ++S+ L E R+ + +F ++ + YN +I+ L
Sbjct: 518 LLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLC 577
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ T D+A + F M P+ TYT +I+G
Sbjct: 578 KRWET-----------------------DRAIDFFAYMVSNGCMPNESTYTMLIKGLASE 614
Query: 194 NDWNEAKCLLIEMMDQGV 211
EA+ LL E+ +G
Sbjct: 615 GLAKEAQELLSELCSRGA 632
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 116/363 (31%), Positives = 194/363 (53%), Gaps = 24/363 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ +FD M R P + ++ G K + +F ++ S G+ PD TY LI+
Sbjct: 100 YKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEAD-KVFNKMFSRGVEPDEVTYTTLID 158
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+CK G + F + ++++S TPN VT+T+L GLC ++ A L ++ G +
Sbjct: 159 GYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQL 218
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
N+ TYN+L+NGL ++G+ A+ L EEM V G PD
Sbjct: 219 NICTYNSLVNGLCKSGNIRQAVKLMEEME-------VAGMY----------------PDT 255
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+T+T+++ +C + +A LL EM+D+G+QP V+TFNV+M+ C +G +++ RLL
Sbjct: 256 ITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAW 315
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M++ G+ PN YN+LM +C+ + E++ M + G +Y+ILI G+CK +
Sbjct: 316 MLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARN 375
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
++ A L+ EM KG YN++ F+ ++ A +LF+EM+R+G+AAD Y
Sbjct: 376 MKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNL 435
Query: 361 FID 363
F+D
Sbjct: 436 FVD 438
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 191/399 (47%), Gaps = 12/399 (3%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P V S++ + VL L + + GL P+LYTYN +I CK G+
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V VL ++ P+ V +T+LI G C I A LF ++ P+ Y
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDEN 175
+I GL R G + A +F +M S E + G ++KA L QM
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+ P+VVTYT++ G C + A LL EM +G+Q N+ T+N +++ LCK+G + +A
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+L++ M G+ P+ + TLMD +C TG + +A EL M G TV ++++L+NG+
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
C + +E L ML KGI P+ YN+L + + +++ M GV D+
Sbjct: 301 CMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDS 360
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
TY I G CK + EA L + + L +YN
Sbjct: 361 NTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYN 399
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 165/316 (52%), Gaps = 23/316 (7%)
Query: 84 TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALN 143
P+ V+++++I G C + + L ++++ G +PN++TYN++I L ++G
Sbjct: 7 APDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK------ 60
Query: 144 LFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
VD A+ + +M ++ I PD V YT++I GFC + A L
Sbjct: 61 -----------------VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLF 103
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
EM Q + P+ + + ++ LC+ GKM EA ++ + M GV P+ Y TL+DG+C +
Sbjct: 104 DEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKS 163
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
G + +A L M G T V +Y+ L +G CK +++ A L EM KG++ ++ Y
Sbjct: 164 GEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTY 223
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
N+L L + + +A KL +EM+ G+ DT T+ T +D CK +V+A EL R +
Sbjct: 224 NSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLD 283
Query: 384 LKCELDIRAYNCLIDG 399
+ + +N L++G
Sbjct: 284 RGLQPTVITFNVLMNG 299
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 133/230 (57%)
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
MK PDVV+Y++VI G+C + + L+ EM +G++PN+ T+N I+ LCK+GK
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+D+A R+L MI G+ P+ VY TL+DGFC G + A +LF ME +Y+
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+I G C+ ++ A ++ +M S+G++PD V Y TL + ++E+AF L ++M + G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + TY DGLCK + A EL + +L+I YN L++GL
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGL 230
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 146/324 (45%), Gaps = 15/324 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ M + R P ++ L K+ + SL ++ +GL P++ TY L +
Sbjct: 137 VFNKMFS-RGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGL 195
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK+G+V +L + N T+ SL+ GLC I +A L ++ V G P+
Sbjct: 196 CKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDT 255
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFL 169
T+ TL++ +TG + A L EM NG F + G ++ + L
Sbjct: 256 ITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNG-FCMSGMLEDGERLLA 314
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
M ++ I P+ TY S+++ +C N+ + M +GV P+ T+N+++ CK
Sbjct: 315 WMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKAR 374
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
M EA L M + G A YN+++ GF +++ A+ELF M G Y+
Sbjct: 375 NMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYN 434
Query: 290 ILINGYCKNKEIEGALSLYGEMLS 313
+ ++ +E AL L E +
Sbjct: 435 LFVDISYGEGNMETALELCDEAIE 458
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 191/395 (48%), Gaps = 12/395 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+CSF L L K D ++ ++ ++G+ P L T+N +IN CK GRV +++
Sbjct: 167 LCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMS 226
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
I R PNA T+TSLI G C + A A+F ++ GC+PN TY+TLINGL G
Sbjct: 227 HIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEG 286
Query: 137 HTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYT 184
A+++ EEM E V G +A EL +MK P++ T+T
Sbjct: 287 RLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFT 346
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
++I G + A L +M+ G+ P VT+N ++++LC G+ + A + M+
Sbjct: 347 ALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSH 406
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G P+ YN ++ FCL G + +A +F M G + V +Y+ LI GYCK + A
Sbjct: 407 GSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNA 466
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
+ L M G+KPD Y L ++E A LF M G++ + TY IDG
Sbjct: 467 MRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDG 526
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + +A+ LF + + YN +I G
Sbjct: 527 YFNLAKVDDALALFWKMVESGNLPSSQTYNVMISG 561
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 187/384 (48%), Gaps = 12/384 (3%)
Query: 29 KNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 88
+N + D ++F R+ G P+ TY+ LIN C GR+ +L +++ P
Sbjct: 249 RNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVY 308
Query: 89 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM 148
T+T + LC EA L K++ GC PN+ T+ LI+GL R G +A+ L+ +M
Sbjct: 309 TYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKM 368
Query: 149 ASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+ + VEG + A +F M P TY +I+ FC D
Sbjct: 369 LADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDI 428
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+A + +M+ G PNV+T+N ++ CK G ++ A RLL++M G++P+A+ Y L
Sbjct: 429 QKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTEL 488
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ GF G++ A LF M G + +Y+ +I+GY +++ AL+L+ +M+ G
Sbjct: 489 ISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
P YN + + + + A +M + G+ + TY +FIDGLC+N A +
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
+F + ++ Y+ LI GL
Sbjct: 609 IFHEMEKRNYFPNLYTYSSLIYGL 632
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 190/401 (47%), Gaps = 16/401 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L L ++T ++FK + S G P TYN +I CFC MG + V+
Sbjct: 375 PTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVI 434
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++L++ +PN +T+ +LI G C + + A L ++ G +P+ +TY LI+G R
Sbjct: 435 FDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSR 494
Query: 135 TGHTIVALNLFEEM-------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G A +LF M A +G F + VD A LF +M + P
Sbjct: 495 GGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAK-VDDALALFWKMVESGNLPSSQ 553
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY +I GF N +EA+ +M+ QG+ PNV+T+ +D LC+NG+ A ++ M
Sbjct: 554 TYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM 613
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAK--ELFVSMESMGCTHTVFSYSILINGYCKNK 299
+ PN + Y++L+ G C GR A+ L + GC V +Y+ L+ G C
Sbjct: 614 EKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEG 673
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
A L M KG++P IY L + + +VE A +F M G Y+
Sbjct: 674 RCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYK 733
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I LCK ++I EA +F+T+ D + L+DGL
Sbjct: 734 ALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGL 774
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 199/415 (47%), Gaps = 17/415 (4%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +FD M+ P V +++ L L + + + + + G+ P +YTY I +
Sbjct: 257 FAMFDRMVKDGCDPNSV-TYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLV 315
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C G S +LG++ + PN TFT+LI GL + + A L+ K+ G P
Sbjct: 316 SLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVP 375
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELF 168
TYN LIN L G A +F+ M S F + G + KA +F
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF 435
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+M +P+V+TY ++I G+C + N A LL M G++P+ T+ ++ +
Sbjct: 436 DKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRG 495
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
GK++ A+ L M++ G+ PN Y ++DG+ +V+ A LF M G + +Y
Sbjct: 496 GKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTY 555
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+++I+G+ K I A + G+M+ +G+ P+V+ Y + L + AFK+F EM++
Sbjct: 556 NVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEK 615
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK---CELDIRAYNCLIDGL 400
+ +TY + I GLC+ E E++ L L CE ++ Y L+ GL
Sbjct: 616 RNYFPNLYTYSSLIYGLCQEGR-AEDAEMYNLLARLTHYGCEPNVDTYTTLVKGL 669
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 185/397 (46%), Gaps = 15/397 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IFD ML S P V ++N L K + + + L + + GL PD +TY LI+ F
Sbjct: 434 IFDKMLKA-GSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGF 492
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
+ G++ H + ++ +PN VT+T++I G +++ +A ALF K+ G P+
Sbjct: 493 SRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSS 552
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN---GEFGVEGFVDK---------AKELFLQ 170
TYN +I+G +T A N +M F+D A ++F +
Sbjct: 553 QTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHE 612
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKC--LLIEMMDQGVQPNVVTFNVIMDELCKN 228
M+ N P++ TY+S+I G C +A+ LL + G +PNV T+ ++ LC
Sbjct: 613 MEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGE 672
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G+ EA +L+ M + G++P+ +Y L+ G C +V A +F SM+++G + Y
Sbjct: 673 GRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDY 732
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
LI CK IE A ++ ML K D V++ L L + + + KL M+
Sbjct: 733 KALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMES 792
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
+ TY L ++ ++ + L I+K
Sbjct: 793 RNCTLNFQTYVMLARELSALDCAIKIPQISQQLGIVK 829
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 93/184 (50%)
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
+F ++ +L K +D A + M+ G+RP+ +NT+++ C GRV AK + +
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
F+Y+ LI G+C+N ++ A +++ M+ G P+ V Y+TL L ++
Sbjct: 229 FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
E A + +EM + G+ +TY + LC EAVEL ++ C +I+ + L
Sbjct: 289 EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTAL 348
Query: 397 IDGL 400
I GL
Sbjct: 349 ISGL 352
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 69/138 (50%), Gaps = 1/138 (0%)
Query: 264 GRVNRAKELFVSMESM-GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G V R + + S +T+ S++ L+ K ++ A +Y +ML+ GI+P ++
Sbjct: 145 GEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLT 204
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
+NT+ +L + +V+ A + + R + +TY + I G C+N + A +F +
Sbjct: 205 FNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMV 264
Query: 383 ILKCELDIRAYNCLIDGL 400
C+ + Y+ LI+GL
Sbjct: 265 KDGCDPNSVTYSTLINGL 282
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 194/398 (48%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + N L L + T + + + ++S G+ PD T+ L+ F + G + V
Sbjct: 195 PDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRV 254
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ + +P VT LI G C R+ +A + G EP+ TYNT ++GL +
Sbjct: 255 KAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQ 314
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
GH AL + + M + V G +D+AK + QM D PD T
Sbjct: 315 NGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTT 374
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ ++I N EA L E+ +G+ P+V TFN++++ LCK G RL + M
Sbjct: 375 FNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMK 434
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G P+ YN L+D C G++ A +L MES GC + +Y+ +I+ CK IE
Sbjct: 435 SSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIE 494
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A ++ +M ++GI V +NTL L + +++ A +L ++M ++G+ + TY + +
Sbjct: 495 EAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSIL 554
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
CK I +A ++ T+ E+D+ Y LI+GL
Sbjct: 555 THYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGL 592
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 196/402 (48%), Gaps = 20/402 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F L + + L + ++ G P T N+LIN +CKMGRV
Sbjct: 230 PDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGY 289
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + + F P+ VT+ + + GLC + A + + G +P+VFTYNT+IN L +
Sbjct: 290 IQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSK 349
Query: 135 TGHTIVALNLFEEMASG----------------NGEFGVEGFVDKAKELFLQMKDENINP 178
G A + +M + + +E +D A+EL ++ ++P
Sbjct: 350 NGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVK----GLSP 405
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
DV T+ +I C D + L EM G P+ VT+N+++D LC GK+ A LL
Sbjct: 406 DVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLL 465
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
+ M G + YNT++D C R+ A+E+F M++ G + + +++ LI+G CK
Sbjct: 466 NEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKA 525
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
K I+ A L +M+ +G++P+ + YN++ + +++A + + M +G D TY
Sbjct: 526 KRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTY 585
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
T I+GLCK A++L R +RI +AYN +I L
Sbjct: 586 GTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSL 627
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 182/366 (49%), Gaps = 14/366 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L +N H L + + G PD++TYN +INC K G + +
Sbjct: 300 PDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGI 359
Query: 75 LGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ +++ R C P+ TF +LI L +++R+ EA L +L V G P+V+T+N LIN L
Sbjct: 360 VNQMVDRGCL-PDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALC 418
Query: 134 RTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
+ G + + LFEEM S G + A +L +M+ V
Sbjct: 419 KVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTV 478
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY ++I C EA+ + +M QG+ + VTFN ++D LCK ++D+A+ L++ M
Sbjct: 479 TYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQM 538
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++ G++PN YN+++ +C G + +A ++ +M + G V +Y LING CK
Sbjct: 539 VKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRT 598
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ AL L M KGI+P YN + LF + + A LF EM G D TY+
Sbjct: 599 QVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIV 658
Query: 362 IDGLCK 367
LC+
Sbjct: 659 FRSLCR 664
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 153/327 (46%), Gaps = 12/327 (3%)
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
+ V F L+ L S++ +++ ++ G +P+V T NTLI L R A+ +
Sbjct: 161 DTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLML 220
Query: 146 EEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
EEM+S F EG ++ A + +M + +P VT +I G+C
Sbjct: 221 EEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKM 280
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+A + + + G +P+ VT+N + LC+NG + A +++DLM+Q G P+ F Y
Sbjct: 281 GRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTY 340
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
NT+++ G ++ AK + M GC +++ LI +E AL L E+
Sbjct: 341 NTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTV 400
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG+ PDV +N L L ++ +LF+EM+ G D TY ID LC +
Sbjct: 401 KGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGN 460
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A++L + C YN +ID L
Sbjct: 461 ALDLLNEMESNGCPRSTVTYNTIIDAL 487
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 146/313 (46%), Gaps = 24/313 (7%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
L ++ P V +FNIL L K + LF+ + S+G PD TYNILI+ C MG+
Sbjct: 398 LTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGK 457
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ + +L + + + VT+ ++I LC + RI EA +F ++ G + T+NT
Sbjct: 458 LGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNT 517
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
LI+GL + +D A EL QM E + P+ +TY S++
Sbjct: 518 LIDGLCKAKR-----------------------IDDATELIEQMVKEGLQPNNITYNSIL 554
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
+C + +A +L M G + +VVT+ +++ LCK G+ A +LL M G+R
Sbjct: 555 THYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIR 614
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK-NKEIEGALS 306
P YN ++ + A LF M +G +Y I+ C+ I+ A
Sbjct: 615 PTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFD 674
Query: 307 LYGEMLSKGIKPD 319
EM++KG P+
Sbjct: 675 FLVEMVNKGFMPE 687
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 130/278 (46%), Gaps = 11/278 (3%)
Query: 128 LINGLYRTGHTI--VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDEN---INPDVVT 182
L+ + R GH + V + F E + F D A +L L D + + D V
Sbjct: 111 LVREMRREGHQVRAVVVRSFVESYARLRRF------DDAVDLVLNQLDNDTFGVQADTVV 164
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ ++ + + + EM +G+QP+VVT N ++ LC+ ++ A +L+ M
Sbjct: 165 FNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMS 224
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
GV P+ + TLM GF G + A + M GC+ T + ++LINGYCK +E
Sbjct: 225 SHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVE 284
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL + ++ G +PD V YNT L + V A K+ D M ++G D +TY T I
Sbjct: 285 DALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVI 344
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ L KN + EA + + C D +N LI L
Sbjct: 345 NCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVAL 382
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 191/395 (48%), Gaps = 12/395 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+CSF L L K D ++ ++ ++G+ P L T+N +IN CK GRV +++
Sbjct: 167 LCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMS 226
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
I R PNA T+TSLI G C + A A+F ++ GC+PN TY+TLINGL G
Sbjct: 227 HIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEG 286
Query: 137 HTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYT 184
A+++ EEM E V G +A EL +MK P++ T+T
Sbjct: 287 RLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFT 346
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
++I G + A L +M+ G+ P VT+N ++++LC G+ + A + M+
Sbjct: 347 ALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSH 406
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G P+ YN ++ FCL G + +A +F M G + V +Y+ LI GYCK + A
Sbjct: 407 GSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNA 466
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
+ L M G+KPD Y L ++E A LF M G++ + TY IDG
Sbjct: 467 MRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDG 526
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + +A+ LF + + YN +I G
Sbjct: 527 YFNLAKVDDALALFWKMVESGNLPSSQTYNVMISG 561
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 187/384 (48%), Gaps = 12/384 (3%)
Query: 29 KNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 88
+N + D ++F R+ G P+ TY+ LIN C GR+ +L +++ P
Sbjct: 249 RNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVY 308
Query: 89 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM 148
T+T + LC EA L K++ GC PN+ T+ LI+GL R G +A+ L+ +M
Sbjct: 309 TYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKM 368
Query: 149 ASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+ + VEG + A +F M P TY +I+ FC D
Sbjct: 369 LADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDI 428
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+A + +M+ G PNV+T+N ++ CK G ++ A RLL++M G++P+A+ Y L
Sbjct: 429 QKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTEL 488
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ GF G++ A LF M G + +Y+ +I+GY +++ AL+L+ +M+ G
Sbjct: 489 ISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
P YN + + + + A +M + G+ + TY +FIDGLC+N A +
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
+F + ++ Y+ LI GL
Sbjct: 609 IFHEMEKRNYFPNLYTYSSLIYGL 632
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 191/401 (47%), Gaps = 16/401 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L L ++T ++FK + S G P TYN +I CFC MG + V+
Sbjct: 375 PTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVI 434
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++L++ +PN +T+ +LI G C + + A L ++ G +P+ +TY LI+G R
Sbjct: 435 FDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSR 494
Query: 135 TGHTIVALNLFEEM-------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G A +LF M A +G F + VD A LF +M + P
Sbjct: 495 GGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAK-VDDALALFWKMVESGNLPSSQ 553
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY +I GF N +EA+ +M+ QG+ PNV+T+ +D LC+NG+ A ++ M
Sbjct: 554 TYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM 613
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAK--ELFVSMESMGCTHTVFSYSILINGYCKNK 299
+ PN + Y++L+ G C GR A+ L + GC V +Y+ L+ G C
Sbjct: 614 EKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEG 673
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
A L M KG++P IY L + + +VE A +F M G Y+
Sbjct: 674 RCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYK 733
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I LCK ++I EA +F+T+ D A+ L+DGL
Sbjct: 734 ALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGL 774
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 199/415 (47%), Gaps = 17/415 (4%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +FD M+ P V +++ L L + + + + + G+ P +YTY I +
Sbjct: 257 FAMFDRMVKDGCDPNSV-TYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLV 315
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C G S +LG++ + PN TFT+LI GL + + A L+ K+ G P
Sbjct: 316 SLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVP 375
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELF 168
TYN LIN L G A +F+ M S F + G + KA +F
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF 435
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+M +P+V+TY ++I G+C + N A LL M G++P+ T+ ++ +
Sbjct: 436 DKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRG 495
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
GK++ A+ L M++ G+ PN Y ++DG+ +V+ A LF M G + +Y
Sbjct: 496 GKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTY 555
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+++I+G+ K I A + G+M+ +G+ P+V+ Y + L + AFK+F EM++
Sbjct: 556 NVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEK 615
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK---CELDIRAYNCLIDGL 400
+ +TY + I GLC+ E E++ L L CE ++ Y L+ GL
Sbjct: 616 RNYFPNLYTYSSLIYGLCQEGR-AEDAEMYNLLARLTHYGCEPNVDTYTTLVKGL 669
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 184/397 (46%), Gaps = 15/397 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IFD ML S P V ++N L K + + + L + + GL PD +TY LI+ F
Sbjct: 434 IFDKMLKA-GSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGF 492
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
+ G++ H + ++ +PN VT+T++I G +++ +A ALF K+ G P+
Sbjct: 493 SRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSS 552
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN---GEFGVEGFVDK---------AKELFLQ 170
TYN +I+G +T A N +M F+D A ++F +
Sbjct: 553 QTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHE 612
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKC--LLIEMMDQGVQPNVVTFNVIMDELCKN 228
M+ N P++ TY+S+I G C +A+ LL + G +PNV T+ ++ LC
Sbjct: 613 MEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGE 672
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G+ EA +L+ M + G++P+ +Y L+ G C +V A +F SM+++G + Y
Sbjct: 673 GRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDY 732
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
LI CK IE A ++ ML K D V + L L + + + KL M+
Sbjct: 733 KALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMES 792
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
+ TY L ++ ++ + L I+K
Sbjct: 793 RNCTLNFQTYVMLARELSALDCAIKIPQISQQLGIVK 829
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 93/184 (50%)
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
+F ++ +L K +D A + M+ G+RP+ +NT+++ C GRV AK + +
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
F+Y+ LI G+C+N ++ A +++ M+ G P+ V Y+TL L ++
Sbjct: 229 FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
E A + +EM + G+ +TY + LC EAVEL ++ C +I+ + L
Sbjct: 289 EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTAL 348
Query: 397 IDGL 400
I GL
Sbjct: 349 ISGL 352
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 69/138 (50%), Gaps = 1/138 (0%)
Query: 264 GRVNRAKELFVSMESM-GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G V R + + S +T+ S++ L+ K ++ A +Y +ML+ GI+P ++
Sbjct: 145 GEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLT 204
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
+NT+ +L + +V+ A + + R + +TY + I G C+N + A +F +
Sbjct: 205 FNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMV 264
Query: 383 ILKCELDIRAYNCLIDGL 400
C+ + Y+ LI+GL
Sbjct: 265 KDGCDPNSVTYSTLINGL 282
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 206/414 (49%), Gaps = 15/414 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ I + ML +P SFNIL A+ + D ++ F+ + PDL+T+ IL++
Sbjct: 139 YAIHEEMLKAGIAPNTF-SFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVD 197
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTP-NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 119
C CK G F V ++ F P + T++++ L R+ EA +F ++ G
Sbjct: 198 CLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFP 257
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASG-----NGEFGV-------EGFVDKAKEL 167
P+ YNT+I+GL + GH AL + + M + +G+ G +++A+EL
Sbjct: 258 PDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEEL 317
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
F M P+ V YTS+I GF + EA L EM++ G +P+V+T V++D LCK
Sbjct: 318 FRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCK 377
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
+G ++A++ + M++ G +PN Y T++ G GRV A + M + GC +
Sbjct: 378 SGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVT 437
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF-KLFDEM 346
Y L++G+CK ++ A L E+ P++ +Y++L L + VE LF++
Sbjct: 438 YICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQS 497
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ D + I GLCK + EA +F+ + C+ D YN LI+GL
Sbjct: 498 KAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGL 551
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 194/425 (45%), Gaps = 61/425 (14%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP ++N + LAK H L + + + P TY IL+N CK G +
Sbjct: 257 PPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEE 316
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ + S F PN+V +TSLI G R+ EA +LF ++ G P+V T+ +I+GL
Sbjct: 317 LFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLC 376
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
++G+ A FEEM G P+VVTYT++I+G
Sbjct: 377 KSGNFEQAAKSFEEMMRG-----------------------GCKPNVVTYTTIIQGLSKI 413
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
A ++ M+ G P+ VT+ ++D CK G++DEA++LLD + + PN +Y
Sbjct: 414 GRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLY 473
Query: 254 --------------NTLMD----------------------GFCLTGRVNRAKELFVSME 277
NTL D G C TGR++ A +F M
Sbjct: 474 SSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMV 533
Query: 278 SMGCTHTVFSYSILINGYCKNKE--IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
S GC +Y+ILING C+++E +E A +L ++ G PD V Y L + L +I +
Sbjct: 534 SEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGE 593
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
V+RA K+ +E G AD Y GLC + AV LF+ + D AY C
Sbjct: 594 VDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCC 653
Query: 396 LIDGL 400
+I+GL
Sbjct: 654 IINGL 658
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 183/387 (47%), Gaps = 28/387 (7%)
Query: 35 TVLSLFKRLN-STGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
T +S F+ G D++TYN L+N S + + +L++ PN +F L
Sbjct: 101 TAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNIL 160
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG 153
I+ R +A F ++ C+P++ T+ L++ L + G A +F EM +
Sbjct: 161 IRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMA--- 217
Query: 154 EFGVEGFV--------------------DKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
GFV +A+E+F QM+ PD + Y ++I G A
Sbjct: 218 ----MGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKA 273
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
EA +L M+ + P VT+ ++++ LCK G ++ A L +M G RPN+ +Y
Sbjct: 274 GHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIY 333
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
+L+ GF +GR+ A LF M G V +++++I+G CK+ E A + EM+
Sbjct: 334 TSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMR 393
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
G KP+VV Y T+ L +I +V AF++ M G D+ TY +DG CK + E
Sbjct: 394 GGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDE 453
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A +L L +++ Y+ L+ GL
Sbjct: 454 AAQLLDELDKCSSSPNLQLYSSLVKGL 480
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/396 (30%), Positives = 187/396 (47%), Gaps = 19/396 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+ P V + ++ L K+ +++ F+ + G P++ TY +I
Sbjct: 352 LFDEMVEA-GYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGL 410
Query: 63 CKMGRVSHGFVVL-GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
K+GRV++ F ++ G I CF P++VT+ L+ G C R+ EAA L +L PN
Sbjct: 411 SKIGRVANAFRIMKGMIAHGCF-PDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPN 469
Query: 122 VFTYNTLINGLYRTGHTIVALN-LFEE--MASGNGEFGV----------EGFVDKAKELF 168
+ Y++L+ GL G L+ LFE+ A+ N + G+ G +D+A +F
Sbjct: 470 LQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIF 529
Query: 169 LQMKDENINPDVVTYTSVIRGFCYA--NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
+M E PD TY +I G C + N A LL ++ G P+ VT+ + LC
Sbjct: 530 QRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLC 589
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
K G++D A ++L+ G + Y L G C G+V+RA LF M G
Sbjct: 590 KIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAA 649
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+Y +ING K K++E A + EM+ KG KP V Y L L V+ AF F+ M
Sbjct: 650 AYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGM 709
Query: 347 -QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
R + Y I G CK + A++LF +
Sbjct: 710 LARGELVGSVMIYDALIHGFCKALKVDAALKLFEDM 745
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 182/405 (44%), Gaps = 51/405 (12%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L+K + K + + G FPD TY L++ FCK+GR+ +
Sbjct: 398 PNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQL 457
Query: 75 LGRILRSCFTPNAVTFTSLIKGLC-------------------AES-------------- 101
L + + +PN ++SL+KGLC AE+
Sbjct: 458 LDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLC 517
Query: 102 ---RIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV--ALNLFEEMAS-GNGEF 155
R+ EA +F ++ GC+P+ TYN LINGL R+ V A L ++ G
Sbjct: 518 KTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPD 577
Query: 156 GVE-----------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
V G VD+A ++ + N DVV YT++ G CY + A L
Sbjct: 578 AVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQ 637
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
EM+ QG P+ + I++ L K K+++A + D MI G +P Y L+ C G
Sbjct: 638 EMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAG 697
Query: 265 RVNRAKELFVSMESMG-CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
V+ A F M + G +V Y LI+G+CK +++ AL L+ +M+S+G P V
Sbjct: 698 NVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTS 757
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
+LF L + E+A +L EM G T+ +DGL K+
Sbjct: 758 ASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKS 802
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 146/311 (46%), Gaps = 17/311 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM--GRVSHGF 72
P +C +I+ G L K D +F+R+ S G PD TYNILIN C+ RV F
Sbjct: 506 PGLCC-SIIVG-LCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAF 563
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+L + + P+AVT+T L GLC + A + + G +V Y L GL
Sbjct: 564 ALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGL 623
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDV 180
G A++LF+EM G + ++ A + F +M + P V
Sbjct: 624 CYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTV 683
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLD 239
TYT++++ C+A + +EA M+ +G + +V+ ++ ++ CK K+D A +L +
Sbjct: 684 ATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFE 743
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
MI G P A +L DG +G+ +A+EL M + G +++ +++G K+
Sbjct: 744 DMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSD 803
Query: 300 EIEGALSLYGE 310
E L L E
Sbjct: 804 ESGKLLKLVQE 814
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 187/386 (48%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +FN L G L +N ++ V + +++ G PD+ Y +I+ CK G + +
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R+ PN V + +++KGLC+ R EA L +++ C + T+N L++
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF--- 365
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
F G VD+ EL QM PDV+TYT+VI GFC
Sbjct: 366 --------------------FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+EA LL M G +PN V++ +++ LC G+ +A L+ MIQ G PN +N
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFN 465
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL++ C G V +A EL M GC+ + SYS +I+G K + E AL L M++K
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNK 525
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
GI P+ +IY+++ L +V + ++FD ++ + +D Y I LCK A
Sbjct: 526 GISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRA 585
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
++ F + C + Y LI GL
Sbjct: 586 IDFFAYMVSNGCMPNESTYTMLIKGL 611
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 192/385 (49%), Gaps = 21/385 (5%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P PP ++++ ++ + + + + +++ G D N+++N C+ G V
Sbjct: 144 PIPP---MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEA 200
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI-- 129
+L ++ + V++ +++KGLC R + L ++ C PN+ T+NTLI
Sbjct: 201 VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260
Query: 130 ---NGLYRTGHTIVA----------LNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI 176
NGL+ H ++A + ++ + G EG ++ A E+ +M +
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDG---ICKEGHLEVANEILNRMPSYGL 317
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
P+VV Y +V++G C A W EA+ LL EM + + VTFN+++D C+NG +D
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE 377
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
LL+ M+ G P+ Y T+++GFC G ++ A L SM S GC SY+I++ G C
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLC 437
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
A L +M+ +G P+ V +NTL L + VE+A +L +M +G + D
Sbjct: 438 SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 497
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTL 381
+Y T IDGL K EA+EL +
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVM 522
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 172/359 (47%), Gaps = 15/359 (4%)
Query: 54 TYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL 113
YN ++ +C+ G+++ + + PNA TF +++GLC RI +A + ++
Sbjct: 81 AYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137
Query: 114 RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS-------GNGEFGV-----EGFV 161
GC P Y+ ++ R+G ++ + E M + GN + +G V
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
D+A L ++ D+V+Y +V++G C A W + + L+ EM+ PN+VTFN +
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
+ LC+NG + +L M + G P+ +Y T++DG C G + A E+ M S G
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
V Y+ ++ G C + + A L EM K D V +N L + V+R +
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE 377
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
L ++M G D TY T I+G CK I EAV L +++ C+ + +Y ++ GL
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 151/297 (50%), Gaps = 23/297 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+FNIL +N D V+ L +++ S G PD+ TY +IN FCK G + ++L +
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PN V++T ++KGLC+ R ++A L +++ GC PN T+NTLIN L +
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK---- 473
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+G V++A EL QM +PD+++Y++VI G A E
Sbjct: 474 -------------------KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 514
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A LL M+++G+ PN + ++ I L + G++++ ++ D + +R +A +YN ++
Sbjct: 515 ALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVIS 574
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
C +RA + F M S GC +Y++LI G + A L E+ S+G
Sbjct: 575 SLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 138/349 (39%), Gaps = 41/349 (11%)
Query: 92 SLIKGLCAESRIM-----------------------------EAAALFTKLRVFGCEPNV 122
+LI+ LC+ R + AA PN
Sbjct: 52 ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNA 111
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMA-SGNGEFGV-----------EGFVDKAKELFLQ 170
+T+ ++ GL G AL + +EM+ G G + +
Sbjct: 112 YTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEA 171
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + D V+ C +EA LL ++ G + ++V++N ++ LC +
Sbjct: 172 MHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ L+D M+++ PN +NTL+ C G R E+ M GCT + Y+
Sbjct: 232 WGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYAT 291
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+I+G CK +E A + M S G+KP+VV YNT+ L + + A +L EM +
Sbjct: 292 IIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
D T+ +D C+N + +EL + C D+ Y +I+G
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVING 400
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 81/198 (40%), Gaps = 23/198 (11%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP +FN L L K + + L K++ G PDL +Y+ +I+ K G+
Sbjct: 458 PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 517
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L ++ +PN + ++S+ L E R+ + +F ++ + YN +I+ L
Sbjct: 518 LLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLC 577
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ T D+A + F M P+ TYT +I+G
Sbjct: 578 KRWET-----------------------DRAIDFFAYMVSNGCMPNESTYTMLIKGLASE 614
Query: 194 NDWNEAKCLLIEMMDQGV 211
EA+ LL E+ +G
Sbjct: 615 GLAKEAQELLSELCSRGA 632
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 187/386 (48%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +FN L G L +N ++ V + +++ G PD+ Y +I+ CK G + +
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R+ PN V + +++KGLC+ R EA L +++ C + T+N L++
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF--- 365
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
F G VD+ EL QM PDV+TYT+VI GFC
Sbjct: 366 --------------------FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+EA LL M G +PN V++ +++ LC G+ +A L+ MIQ G PN +N
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFN 465
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL++ C G V +A EL M GC+ + SYS +I+G K + E AL L M++K
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNK 525
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
GI P+ +IY+++ L +V + ++FD ++ + +D Y I LCK A
Sbjct: 526 GISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRA 585
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
++ F + C + Y LI GL
Sbjct: 586 IDFFAYMVSNGCMPNESTYTMLIKGL 611
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 192/385 (49%), Gaps = 21/385 (5%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P PP ++++ ++ + + + + +++ G D N+++N C+ G V
Sbjct: 144 PIPP---MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEA 200
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI-- 129
+L ++ + V++ +++KGLC R + L ++ C PN+ T+NTLI
Sbjct: 201 VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260
Query: 130 ---NGLYRTGHTIVA----------LNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI 176
NGL+ H ++A + ++ + G EG ++ A E+ +M +
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDG---ICKEGHLEVANEILNRMPSYGL 317
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
P+VV Y +V++G C A W EA+ LL EM + + VTFN+++D C+NG +D
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE 377
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
LL+ M+ G P+ Y T+++GFC G ++ A L SM S GC SY+I++ G C
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLC 437
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
A L +M+ +G P+ V +NTL L + VE+A +L +M +G + D
Sbjct: 438 SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 497
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTL 381
+Y T IDGL K EA+EL +
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVM 522
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 172/359 (47%), Gaps = 15/359 (4%)
Query: 54 TYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL 113
YN ++ +C+ G+++ + + PNA TF +++GLC RI +A + ++
Sbjct: 81 AYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137
Query: 114 RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS-------GNGEFGV-----EGFV 161
GC P Y+ ++ R+G ++ + E M + GN + +G V
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
D+A L ++ D+V+Y +V++G C A W + + L+ EM+ PN+VTFN +
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
+ LC+NG + +L M + G P+ +Y T++DG C G + A E+ M S G
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
V Y+ ++ G C + + A L EM K D V +N L + V+R +
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE 377
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
L ++M G D TY T I+G CK I EAV L +++ C+ + +Y ++ GL
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 151/297 (50%), Gaps = 23/297 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+FNIL +N D V+ L +++ S G PD+ TY +IN FCK G + ++L +
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PN V++T ++KGLC+ R ++A L +++ GC PN T+NTLIN L +
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK---- 473
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+G V++A EL QM +PD+++Y++VI G A E
Sbjct: 474 -------------------KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 514
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A LL M+++G+ PN + ++ I L + G++++ ++ D + +R +A +YN ++
Sbjct: 515 ALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVIS 574
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
C +RA + F M S GC +Y++LI G + A L E+ S+G
Sbjct: 575 SLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 138/349 (39%), Gaps = 41/349 (11%)
Query: 92 SLIKGLCAESRIM-----------------------------EAAALFTKLRVFGCEPNV 122
+LI+ LC+ R + AA PN
Sbjct: 52 ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNA 111
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMA-SGNGEFGV-----------EGFVDKAKELFLQ 170
+T+ ++ GL G AL + +EM+ G G + +
Sbjct: 112 YTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEA 171
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + D V+ C +EA LL ++ G + ++V++N ++ LC +
Sbjct: 172 MHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ L+D M+++ PN +NTL+ C G R E+ M GCT + Y+
Sbjct: 232 WGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYAT 291
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+I+G CK +E A + M S G+KP+VV YNT+ L + + A +L EM +
Sbjct: 292 IIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
D T+ +D C+N + +EL + C D+ Y +I+G
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVING 400
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 81/198 (40%), Gaps = 23/198 (11%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP +FN L L K + + L K++ G PDL +Y+ +I+ K G+
Sbjct: 458 PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 517
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L ++ +PN + ++S+ L E R+ + +F ++ + YN +I+ L
Sbjct: 518 LLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLC 577
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ T D+A + F M P+ TYT +I+G
Sbjct: 578 KRWET-----------------------DRAIDFFAYMVSNGCMPNESTYTMLIKGLASE 614
Query: 194 NDWNEAKCLLIEMMDQGV 211
EA+ LL E+ +G
Sbjct: 615 GLAKEAQELLSELCSRGA 632
>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
Length = 506
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/420 (30%), Positives = 207/420 (49%), Gaps = 28/420 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG---LFPDLYTYNILI 59
+FD +L R P+ S N +A++ V S F R+ G + P ++TY ILI
Sbjct: 40 VFDELLR-RGIGAPIRSLNGALADVARDNPAAAV-SRFNRMARAGASMVTPTVHTYGILI 97
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK-LRVFGC 118
C C GR+ GF LG +++ F + F L+KGLCA+ R +A + + + C
Sbjct: 98 GCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGMTELSC 157
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG---------EFGVEGFV-----DKA 164
PNVF++ ++ GL + AL L MA G ++G + DKA
Sbjct: 158 VPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDPDKA 217
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
+ +M D I P+VV Y+S+I C ++A + M+ GV PN T+ ++
Sbjct: 218 YATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHG 277
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
C +G++ EA + L+ M GV PN Y++ MD C GR A+++F SM G
Sbjct: 278 FCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPD 337
Query: 285 VFSYSILINGYCKNKEIEGAL----SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
+ +YS L++GY IEGAL L+ M+ ++PD ++NTL + +V+ A
Sbjct: 338 ITTYSSLLHGYA----IEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAM 393
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+F +M++ G+ + TY T I+G CK + + A+ LF+ + + YN ++ GL
Sbjct: 394 LVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGL 453
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 2/174 (1%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IFD M+ R P + +++ L A + LF + + + PD Y +N LI
Sbjct: 325 IFDSMVK-RGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYAS 383
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K G+V +V ++ + PN VT+++LI G C +R+ A ALF ++ G PN
Sbjct: 384 AKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNF 443
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEM-ASGNGEFGVEGFVDKAKELFLQMKDEN 175
TYN ++ GL+RTG T A + ++ SG + +G +++ +LFL M+D +
Sbjct: 444 ITYNIMLQGLFRTGRTATAKEFYVQIIKSGKKDLIEQGLLEELDDLFLSMEDND 497
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/336 (34%), Positives = 168/336 (50%), Gaps = 23/336 (6%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
PD TY ++ CK R+ + + P+A + ++ GLC E ++ EA L
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL 169
F K+ PNV TYNTLINGL + A LF+EMA +G+V
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAG-------KGYV-------- 111
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
P V+Y ++I GFC D AK + +M+ PNVVT+ ++D L K+G
Sbjct: 112 --------PTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSG 163
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+ A+ +LD M++ GV PN Y+ L+DGFC RV+ A +L M + G TV +Y+
Sbjct: 164 KVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYN 223
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
IL+N C+ ++E A L+ M + P VV YNTL L Q++ A +L+ EM
Sbjct: 224 ILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAK 283
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
G D TY T GL + + EA EL +++ K
Sbjct: 284 GCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTK 319
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 173/337 (51%), Gaps = 23/337 (6%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R +PP ++ + L K K D L+ + + + G+ PD + YN +++ C+ +V
Sbjct: 3 RYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEE 62
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
++ ++++ PN VT+ +LI GLC RI A LF ++ G P +YNTLI+
Sbjct: 63 ARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLID 122
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
G + + A ++F++M N P+VVTYT++I G
Sbjct: 123 GFCKKKDLVAAKDVFDKMVRS-----------------------NCVPNVVTYTTLIDGL 159
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
+ A +L M+ +GV PNV T++ ++D CK ++DEA +LL+ M+ G+ P
Sbjct: 160 SKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTV 219
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
YN L++ C ++ A +LF M C TV +Y+ L+ C +K+++GA LY E
Sbjct: 220 VTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAE 279
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
M++KG PD + Y+TL L +V A +L ++M+
Sbjct: 280 MIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 316
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 156/316 (49%), Gaps = 23/316 (7%)
Query: 85 PNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNL 144
P+A+T+ +++ LC RI +A A ++ G +P+ F YN +++GL +
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQ---------- 56
Query: 145 FEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
E V++A+ LF +M + INP+VVTY ++I G C A A L
Sbjct: 57 -------------EEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFK 103
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
EM +G P V++N ++D CK + A + D M++ PN Y TL+DG +G
Sbjct: 104 EMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSG 163
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
+V A E+ M G T V +YS LI+G+CK + ++ A L +M+++GI P VV YN
Sbjct: 164 KVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYN 223
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
L L ++E AFKLF M + TY T + LC + + A L+ +
Sbjct: 224 ILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAK 283
Query: 385 KCELDIRAYNCLIDGL 400
C D Y+ L GL
Sbjct: 284 GCPPDAITYDTLAWGL 299
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++NIL L + + LF+ + P + TYN L+ C ++ +
Sbjct: 217 PTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRL 276
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
++ P+A+T+ +L GL ++ EA L K+++ P
Sbjct: 277 YAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 322
>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
Length = 740
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/472 (27%), Positives = 220/472 (46%), Gaps = 87/472 (18%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + N + L K K D S+ +++ +G+ PDL+TY+++I+ CK + V
Sbjct: 81 PKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERV 140
Query: 75 LGRILRSCFTPNAVTFTSLIKG-----------------------------------LCA 99
L +++ + PN++T+ SLI G L
Sbjct: 141 LEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFK 200
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG--------HTIVALNLFEEMASG 151
R EA +F + + G +P++ +Y+T+++G Y T H I L L + +A
Sbjct: 201 HGRTNEAKCIFDSMVLKGPKPDIISYSTMLHG-YATATDSCLADVHNIFNLMLTKGIAPN 259
Query: 152 NGEFGVE-------GFVDKAKELFLQMKDENINPDVVTYTSVI----------------- 187
F + G +DKA +F M+++ + PD VT+ +VI
Sbjct: 260 KHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFN 319
Query: 188 ------------------RGFCYANDWNEAKCLLIEMMDQGVQP-NVVTFNVIMDELCKN 228
+G C + +AK L+ EMM++ + P V F+ I++ LCK
Sbjct: 320 HMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKE 379
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G++ E ++D+M+Q G RPN +N+LM+G+CL G + A L +M S+G + Y
Sbjct: 380 GRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIY 439
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
L++GYCKN I+ AL+++ +ML KG+KP V+Y+ + LF+ + A K+F EM
Sbjct: 440 GTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIE 499
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G TY + GLC+N+ EA L L + + DI +N +I +
Sbjct: 500 SGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 551
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 194/410 (47%), Gaps = 14/410 (3%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFG-CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
CIFD M+ P P + +L G A + V ++F + + G+ P+ + +NILIN
Sbjct: 209 CIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILIN 268
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+ + G + ++ + P+ VTF ++I LC R+ +A F + G P
Sbjct: 269 AYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPP 328
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGN-GEFGV------------EGFVDKAKEL 167
+ Y LI G G + A L EM + + GV EG V + K++
Sbjct: 329 SEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDI 388
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
M P+VVT+ S++ G+C + EA LL M G++PN + ++D CK
Sbjct: 389 MDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCK 448
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
NG++D+A + M+ GV+P + +Y+ ++ G R AK++F M G T ++ +
Sbjct: 449 NGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHT 508
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y +++ G C+N + A L ++ + +K D++ +N + +F++ + + A +LFD +
Sbjct: 509 YGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAIS 568
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
G+ + TY I L K EA LF ++ D R N ++
Sbjct: 569 TYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 618
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 199/455 (43%), Gaps = 84/455 (18%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTY--------------- 55
R SPP + ++NIL C + D L++ RL GL PD ++Y
Sbjct: 8 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKA 67
Query: 56 -------------------NILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 96
N +I CKM + ++ +++ S P+ T++ +I G
Sbjct: 68 HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 127
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG 156
LC + +A + ++ G PN TYN+LI+G +G ++ +F++M+S
Sbjct: 128 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 187
Query: 157 VE------------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND--------- 195
V+ G ++AK +F M + PD+++Y++++ G+ A D
Sbjct: 188 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNI 247
Query: 196 ----------------------------WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
++A + +M ++G+ P+ VTF ++ LC+
Sbjct: 248 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 307
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
G++D+A + M+ IGV P+ VY L+ G C G + +AKEL M +
Sbjct: 308 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK 367
Query: 288 Y-SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
Y S +IN CK + + M+ G +P+VV +N+L + +E AF L D M
Sbjct: 368 YFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAM 427
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
G+ + + Y T +DG CKN I +A+ +FR +
Sbjct: 428 ASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDM 462
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 175/352 (49%), Gaps = 26/352 (7%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
P ++TYNILI+C+ ++ R G ++GR+L++ P+ ++ SLI G + + +A L
Sbjct: 12 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 70
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL 169
F ++ G P + N++I L + +EM DKA+ +
Sbjct: 71 FLEMMEQGVLPKILICNSIIKELCK----------MKEM-------------DKAESIVQ 107
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M D I PD+ TY+ +I G C + ++A+ +L +M++ G +PN +T+N ++ +G
Sbjct: 108 KMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISG 167
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+E+ R+ M GV P N+ + GR N AK +F SM G + SYS
Sbjct: 168 MWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYS 227
Query: 290 ILINGYCKNKE--IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
+++GY + + +++ ML+KGI P+ ++N L +++A +F++MQ
Sbjct: 228 TMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQ 287
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G+ DT T+ T I LC+ + +A+ F + + Y CLI G
Sbjct: 288 NKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQG 339
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 171/385 (44%), Gaps = 49/385 (12%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF+ ML + P FNIL A+ D + +F+ + + G+ PD T+ +I+
Sbjct: 247 IFNLMLT-KGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSL 305
Query: 63 CKMGRVS---HGF------------VVLGRILRSCFT---------------------PN 86
C++GR+ H F V G +++ C P
Sbjct: 306 CRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPG 365
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
F+S+I LC E R+ E + + G PNV T+N+L+ G G+ A L +
Sbjct: 366 VKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLD 425
Query: 147 EMASGNGE-----FG--VEGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
MAS E +G V+G+ +D A +F M + + P V Y+ ++ G A
Sbjct: 426 AMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQAR 485
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
AK + EM++ G ++ T+ V++ LC+N DEA+ LL+ + + V+ + +N
Sbjct: 486 RTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFN 545
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
++ GR AKELF ++ + G + +YS++I K + E A +L+ +
Sbjct: 546 IVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKS 605
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERA 339
G D + N + +L +V +A
Sbjct: 606 GHASDSRLLNHIVRMLLNKAEVAKA 630
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 118/280 (42%), Gaps = 16/280 (5%)
Query: 15 PPVCSFNILFG--CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
P V +FN L CL N + +L + S G+ P+ Y Y L++ +CK GR+
Sbjct: 399 PNVVTFNSLMEGYCLVGN--MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDAL 456
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
V +L P +V ++ ++ GL R A +F ++ G ++ TY ++ GL
Sbjct: 457 TVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGL 516
Query: 133 YRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDV 180
R T A L E++ + N +F + G +AKELF + + P++
Sbjct: 517 CRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNI 576
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
TY+ +I + EA L I + G + N I+ L ++ +AS L +
Sbjct: 577 QTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSI 636
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+ + + A + L F G+ +L + +M
Sbjct: 637 IGENNLTLEASTISLLASLFSREGKYREHIKLLPANMTMA 676
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 195/395 (49%), Gaps = 12/395 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S+N++ L K + LF + + P+ TYN +I+ K G + GF +
Sbjct: 186 PNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRL 245
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++LR PN +T+ L+ GLC R+ E AA+ ++ P+ FTY+ L +G R
Sbjct: 246 WSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSR 305
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
TG + L+LFEE + G +G + KA+E+ + + + V
Sbjct: 306 TGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVI 365
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G+C D A + +M + ++P+ +T+N +++ L K ++ EA L+ M
Sbjct: 366 YNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEME 425
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ GV P+ +NTL+D + G++ + + M+ G V SY ++N +CKN +I
Sbjct: 426 KNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKIL 485
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+++ +M K + P +YN + E ++AF L ++M+ GV TY I
Sbjct: 486 EAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLI 545
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
GLCK S I EA EL +LR D+ +YN LI
Sbjct: 546 KGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLI 580
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 192/401 (47%), Gaps = 30/401 (7%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
+ D M + R P +++ILF ++ T+LSLF+ G+ YT +IL+N
Sbjct: 279 AVLDEMAS-RKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNG 337
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK G++S VL ++ S V + +LI G C + A ++F +++ P+
Sbjct: 338 LCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPD 397
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
TYN LINGL + + +A +L ++M+ +NP V
Sbjct: 398 HITYNALINGLGKVER-----------------------ITEAHDLVIEMEKNGVNPSVE 434
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
T+ ++I + A + +L +M ++G++PNVV++ I++ CKNGK+ EA +LD M
Sbjct: 435 TFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDM 494
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
V P A VYN ++D + G ++A L M+S G ++ +Y++LI G CK +I
Sbjct: 495 FIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQI 554
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A L + + G+ PDV+ YNTL +RA +L EM + G+ TYR
Sbjct: 555 SEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRML 614
Query: 362 IDGLCKNSYIVEAVELFRTL---RILKCELDIRAYNCLIDG 399
L + E L++ + ++ C YN ++D
Sbjct: 615 FSSLGGAGRVHEMENLYQQMLDKDVVPCS---GIYNIMVDA 652
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 177/397 (44%), Gaps = 25/397 (6%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGL-FPDLYTYNILINCF 62
F+ ++ R P + C+ D + + +R+ G P+ ++YN++I
Sbjct: 140 FELLVAARARPDTFTWNKAVQACVVAGD-LDEAVGMLRRMGCDGAPAPNAFSYNVVIAGL 198
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K G + + PN +T+ ++I G + + L++++ G +PNV
Sbjct: 199 WKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNV 258
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TYN L++GL R G + +EMAS + PD T
Sbjct: 259 ITYNVLLSGLCRAGRMGETAAVLDEMAS-----------------------RKMVPDGFT 295
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+ + G D L E + +GV+ T +++++ LCK+GK+ +A +L ++
Sbjct: 296 YSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLV 355
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ +YNTL++G+C G + A +F M+S +Y+ LING K + I
Sbjct: 356 NSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERIT 415
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L EM G+ P V +NTL Q+E+ F + +MQ G+ + +Y + +
Sbjct: 416 EAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIV 475
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ CKN I+EAV + + I + YN +ID
Sbjct: 476 NAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDA 512
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 119/245 (48%), Gaps = 1/245 (0%)
Query: 157 VEGFVDKAKELFLQMK-DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNV 215
V G +D+A + +M D P+ +Y VI G A +A L EM ++ V PN
Sbjct: 164 VAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNH 223
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
+T+N ++D K G ++ RL M++ G++PN YN L+ G C GR+ +
Sbjct: 224 ITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDE 283
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
M S F+YSIL +G+ + + + LSL+ E + KG+K + L L + +
Sbjct: 284 MASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGK 343
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
+ +A ++ + G+ T Y T I+G C+ + A +F+ ++ D YN
Sbjct: 344 ISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNA 403
Query: 396 LIDGL 400
LI+GL
Sbjct: 404 LINGL 408
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 54/136 (39%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + ++N+L L K L L + GL PD+ +YN LI+ C
Sbjct: 535 PPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALE 594
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ + + P+ T+ L L R+ E L+ ++ P YN +++
Sbjct: 595 LEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYA 654
Query: 134 RTGHTIVALNLFEEMA 149
+ G L +EM+
Sbjct: 655 KCGEESKVEALRKEMS 670
>gi|218184813|gb|EEC67240.1| hypothetical protein OsI_34171 [Oryza sativa Indica Group]
Length = 458
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 196/393 (49%), Gaps = 20/393 (5%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG---LFPDLYTYNILINCFCK 64
L +R + SFN +A++ V SLF R+ G + PDL TY+ILI C C+
Sbjct: 49 LPLRGWGASIYSFNRTLTDVARDSPAAAV-SLFNRMARAGADEVTPDLCTYSILIGCCCR 107
Query: 65 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPNVF 123
GR+ GF LG +++ F A+TF L+KGLCA+ R +A + ++ C P+VF
Sbjct: 108 AGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVF 167
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGE---------------FGVEGFVDKAKELF 168
+ L+ GL + AL L MA G F EG DKA +
Sbjct: 168 SCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTY 227
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+M I+P+VVTY+S+I C A ++A +L M+ GV P+ +T++ I+ C +
Sbjct: 228 HEMLGRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYCSS 287
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G+ E L+ M GV PN Y +LM+ C GR +A+++F SM G + +Y
Sbjct: 288 GQPKEDIGTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARKIFDSMTKRGLEPDIATY 347
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
L+ GY + +L M+ GI+PD ++N L + +V++A +F +M++
Sbjct: 348 RTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQ 407
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
G+ + Y T ID LCK+ + +A+ F +
Sbjct: 408 HGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQM 440
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 124/274 (45%), Gaps = 23/274 (8%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
SPP V S+ + K D S + + + P++ TY+ +I CK +
Sbjct: 200 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLGRRISPNVVTYSSIIAALCKAQAMDKAM 259
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
VL ++++ P+ +T++S++ G C+ + E K+R G EPNV TY +L+N L
Sbjct: 260 EVLNTMVKNGVMPDCMTYSSILHGYCSSGQPKEDIGTLNKMRSDGVEPNVVTYRSLMNYL 319
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ G KA+++F M + PD+ TY ++++G+
Sbjct: 320 CKNGRCT-----------------------KARKIFDSMTKRGLEPDIATYRTLLQGYAT 356
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
E LL M+ G+QP+ FN+++ K K+D+A + M Q G+ PN
Sbjct: 357 KGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVC 416
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
Y T++D C +G V+ A F M G T +
Sbjct: 417 YGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 450
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 139/323 (43%), Gaps = 25/323 (7%)
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
R P+A T+ G S A + +L + G +++++N + + R
Sbjct: 16 RGGGVPSAQGGTTQDLGRAGGSGTEGARHVLDELPLRGWGASIYSFNRTLTDVARDSPA- 74
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
A++LF MA + + PD+ TY+ +I C A +
Sbjct: 75 AAVSLFNRMARAGAD--------------------EVTPDLCTYSILIGCCCRAGRLDLG 114
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL-LDLMIQIGVRPNAFVYNTLMD 258
L ++ +G + +TF ++ LC + + +A + L M ++ P+ F L+
Sbjct: 115 FAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLK 174
Query: 259 GFCLTGRVNRAKELFVSM---ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
G C R A EL M G V SY+ +ING+ K + + A S Y EML +
Sbjct: 175 GLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLGRR 234
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
I P+VV Y+++ L + +++A ++ + M ++GV D TY + + G C + E +
Sbjct: 235 ISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYCSSGQPKEDI 294
Query: 376 ELFRTLRILKCELDIRAYNCLID 398
+R E ++ Y L++
Sbjct: 295 GTLNKMRSDGVEPNVVTYRSLMN 317
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 92/235 (39%), Gaps = 50/235 (21%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ + ML R SP V +++ + L K + D + + + G+ PD TY+ +++
Sbjct: 224 YSTYHEMLGRRISPN-VVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILH 282
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+C G+ L ++ PN VT+ SL+ LC R +A +F + G EP
Sbjct: 283 GYCSSGQPKEDIGTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARKIFDSMTKRGLEP 342
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNG--------------------------- 153
++ TY TL+ G Y T +V ++ ++ NG
Sbjct: 343 DIATYRTLLQG-YATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLV 401
Query: 154 -----EFGV----------------EGFVDKAKELFLQMKDENINPDVVTYTSVI 187
+ G+ G VD A F QM DE + P+++ S +
Sbjct: 402 FSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIILSVSSV 456
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 210/436 (48%), Gaps = 52/436 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF-V 73
P + +F IL C + + ++ TGL D + L+ C R S +
Sbjct: 11 PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNI 70
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG--CEPNVFTYNTLING 131
VL R+ TP+ ++++L+KGLCAE + EAA L + G C P+V +Y+T+I+G
Sbjct: 71 VLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHG 130
Query: 132 LYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINP 178
++ G A LF +M +G V+ +DKA+ + QM DE+I P
Sbjct: 131 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQA-MDKAEAVLQQMIDEHIMP 189
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
+ TY S+I G+ + W EA +L EM G +PNVVT+N+++D LCK+G EA +
Sbjct: 190 NCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIF 249
Query: 239 DLMIQIGVRPNAFVYNTLMDG-----------------------------------FCLT 263
+ MIQ G +P+A Y +L+ G +C
Sbjct: 250 NSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKC 309
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
GR++ A F+ M+ +G + +Y+ +I+G CK ++ A+S + +M+ G+ P+++ +
Sbjct: 310 GRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITF 369
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
TL + E+A +LF EM G+ D + ID L K + EA +LF +
Sbjct: 370 TTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPR 429
Query: 384 LKCELDIRAYNCLIDG 399
+ ++ +YN +I G
Sbjct: 430 AGAKPNVVSYNTMIHG 445
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 191/400 (47%), Gaps = 14/400 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG--LFPDLYTYNILINCFCKMGRVSHGF 72
P V S++ L L K + L + G PD+ +Y+ +I+ F K G V +
Sbjct: 82 PDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAY 141
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+ ++L PN VT S+I GLC + +A A+ ++ PN TYN+LI+G
Sbjct: 142 TLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGY 201
Query: 133 YRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDV 180
+G A+ + +EM+ V GF +A+E+F M PD
Sbjct: 202 LSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDA 261
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
TY S++ G+ + E + M+ G++ N TF++ + CK G++DEAS
Sbjct: 262 TTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIK 321
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M Q+G P+ Y T++DG C GR++ A F M G + + +++ LI+G+ +
Sbjct: 322 MQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGK 381
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
E A L+ EM+ +GI PDV I+ + LF+ +V A KLFD M R G + +Y T
Sbjct: 382 WEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNT 441
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I G + E ++L + ++ + +N L+DG+
Sbjct: 442 MIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGM 481
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 182/381 (47%), Gaps = 30/381 (7%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP V + N + L K + D ++ +++ + P+ TYN LI+ + G+ +
Sbjct: 153 PPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVR 212
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L + R PN VT+ LI LC EA +F + G +P+ TY +L++G Y
Sbjct: 213 ILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHG-Y 271
Query: 134 RTGHTIVALNLFEEMASGNG------EFGVE-------GFVDKAKELFLQMKDENINPDV 180
T +V +N +++ NG F +E G +D+A F++M+ PD+
Sbjct: 272 ATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDI 331
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTYT+VI G C ++A +M+D G+ PN++TF ++ GK ++A L
Sbjct: 332 VTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYE 391
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M+ G+ P+ ++ ++D G+V A++LF M G V SY+ +I+GY E
Sbjct: 392 MMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGE 451
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ + L +ML G+KP V +NTL D M G+ D T +T
Sbjct: 452 VGEVMKLLDDMLLIGLKPTAVTFNTLL----------------DGMVSMGLKPDVDTCKT 495
Query: 361 FIDGLCKNSYIVEAVELFRTL 381
ID C++ I + + LFR +
Sbjct: 496 LIDSCCEDGRIEDILTLFREM 516
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 164/343 (47%), Gaps = 39/343 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N+L CL K+ + +F + +G PD TY L++ + G + V
Sbjct: 224 PNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNV 283
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++++ N TF+ I C R+ EA+ F K++ G P++ TY T+I+GL +
Sbjct: 284 KDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCK 343
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G +D A F QM D+ ++P+++T+T++I GF
Sbjct: 344 IGR-----------------------LDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYG 380
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
W +A+ L EMMD+G+ P+V F ++D L K GK+ EA +L DLM + G +PN YN
Sbjct: 381 KWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYN 440
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
T++ G+ + G V +L M +G T +++ L++G M+S
Sbjct: 441 TMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG----------------MVSM 484
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
G+KPDV TL E ++E LF EM DT T
Sbjct: 485 GLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTIT 527
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 4/206 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++ + L K D +S F ++ GL P++ T+ LI+ F G+ +
Sbjct: 329 PDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEEL 388
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ P+ FT++I L E ++ EA LF + G +PNV +YNT+I+G +
Sbjct: 389 FYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFI 448
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G + L ++M G++ L M + PDV T ++I C
Sbjct: 449 AGEVGEVMKLLDDMLL----IGLKPTAVTFNTLLDGMVSMGLKPDVDTCKTLIDSCCEDG 504
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNV 220
+ L EM+ + + + +T N+
Sbjct: 505 RIEDILTLFREMLGKADKTDTITENI 530
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 57/143 (39%), Gaps = 16/143 (11%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
Y + R PP V F + L K LF + G P++ +YN +I+ +
Sbjct: 390 YEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIA 449
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
G V +L +L P AVTF +L+ G+ + G +P+V T
Sbjct: 450 GEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVS----------------MGLKPDVDTC 493
Query: 126 NTLINGLYRTGHTIVALNLFEEM 148
TLI+ G L LF EM
Sbjct: 494 KTLIDSCCEDGRIEDILTLFREM 516
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 189/386 (48%), Gaps = 28/386 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N L L + + L+ + GL P+++TYNIL+ CK RV +
Sbjct: 142 PTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKL 201
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ P+AVT+T+++ LC +I +A L + + P+V YN LI+G+ +
Sbjct: 202 FVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PSVPVYNALIDGMCK 256
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G VA+ L EM D ++P+VV+Y+ +I C +
Sbjct: 257 EGRIEVAIKLLGEMM-----------------------DNGVDPNVVSYSCIINSLCVSG 293
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ A L +M +G N+ TF ++ GK+ EA L LMIQ G PN YN
Sbjct: 294 NVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYN 353
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+ G C G + A ++ M+ GC V +YSILI+G+ K+ ++ GA + M+S
Sbjct: 354 TLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISH 413
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G +P+VV Y + VL + ++A L ++M +G +T T+ TFI GLC N + A
Sbjct: 414 GCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWA 473
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
++L ++ C +I YN L+D L
Sbjct: 474 MKLLERMQGHGCLPNITTYNELLDAL 499
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 185/395 (46%), Gaps = 17/395 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++NIL L KN D LF +++ G PD TY +++ CK G++ +
Sbjct: 177 PNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL 236
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
GR F P+ + +LI G+C E RI A L ++ G +PNV +Y+ +IN L
Sbjct: 237 AGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCV 291
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMK------------DENINPDVVT 182
+G+ +A LF +M + + F K F++ K + P+VV
Sbjct: 292 SGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVA 351
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G C EA + +M G PNV T+++++D K+G + AS + MI
Sbjct: 352 YNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMI 411
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G RPN Y ++D C ++A L M GCT +++ I G C N +E
Sbjct: 412 SHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVE 471
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ L M G P++ YN L LF +++ E AF LF E++ + + TY T +
Sbjct: 472 WAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVL 531
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
G + + EA++LF + D YN +I
Sbjct: 532 YGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMI 566
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 157/337 (46%), Gaps = 24/337 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L N + L + ++ +G P++ TY+ILI+ F K G +
Sbjct: 347 PNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASET 406
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R++ PN VT+T ++ LC S +A +L K+ + GC PN T+NT I GL
Sbjct: 407 WNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCG 466
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G A+ L E M G+G P++ TY ++ N
Sbjct: 467 NGRVEWAMKLLERM-QGHGCL----------------------PNITTYNELLDALFRMN 503
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ EA L E+ + +QPN+VT+N ++ + G M EA +L + G P++ YN
Sbjct: 504 KYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYN 563
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHT-VFSYSILINGYCKNKEIEGALSLYGEMLS 313
T++ +C G+V A +L + SM H + +Y+ LI G C IE A++ + ++
Sbjct: 564 TMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAIN 623
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+GI P+ +N L F+ + D++ R G
Sbjct: 624 QGICPNFATWNALVRCFFDSLGHMGPIHILDDILRKG 660
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 125/277 (45%), Gaps = 30/277 (10%)
Query: 154 EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
G E +D + + QMK + IN + +I G+ +A + + + G +P
Sbjct: 83 RLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKP 142
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
V +N ++D L K + L M + G+ PN F YN L+ C RV+ A +LF
Sbjct: 143 TVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLF 202
Query: 274 VSMESMGC-----THT-------------------------VFSYSILINGYCKNKEIEG 303
V M + GC T+T V Y+ LI+G CK IE
Sbjct: 203 VEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEV 262
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A+ L GEM+ G+ P+VV Y+ + L VE AF LF +M G A+ T+ I
Sbjct: 263 AIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIK 322
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G + EA++L++ + CE ++ AYN LI GL
Sbjct: 323 GCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGL 359
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 102/219 (46%), Gaps = 5/219 (2%)
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY +I + + + +L +M G+ F I++ + G ++A ++ +
Sbjct: 76 TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G +P +YN L+D + L+ +M+ G VF+Y+IL+ CKN +
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A L+ EM +KG PD V Y T+ L + +++ A +L + Y
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PSVPVYNAL 250
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
IDG+CK I A++L + + ++ +Y+C+I+ L
Sbjct: 251 IDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSL 289
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 87/189 (46%), Gaps = 5/189 (2%)
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
Q T+ V+++ L + +MD +L M G+ ++ +++G+ G +A +
Sbjct: 71 QHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALK 130
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
+F + GC TV Y+ L++ + + LY M G+ P+V YN L L
Sbjct: 131 MFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALC 190
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIR 391
+ +V+ A KLF EM G D TY T + LCK I +A EL + +
Sbjct: 191 KNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKP-----SVP 245
Query: 392 AYNCLIDGL 400
YN LIDG+
Sbjct: 246 VYNALIDGM 254
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/379 (32%), Positives = 189/379 (49%), Gaps = 14/379 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ +FN L L K L ++ G+ P+L+TYN I C+ G + ++G
Sbjct: 216 LSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVG 275
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
R++ P+ VT+ LI GLC S+ EA KL G EP+ FTYNTLI G + G
Sbjct: 276 RLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGG 335
Query: 137 HTIVALNLFEEMASGNG----EFGV---------EGFVDKAKELFLQMKDENINPDVVTY 183
+A + A NG EF EG ++A LF + + I P+V+ Y
Sbjct: 336 MVQLAERILVN-AVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
++I+G EA L EM ++G+ P V TFN++++ LCK G + +A L+ +MI
Sbjct: 395 NTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G P+ F +N L+ G+ ++ A E+ M G V++Y+ L+NG CK + E
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYED 514
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
+ Y M+ KG P++ +N L L H++++A L +EM+ V D T+ T ID
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLID 574
Query: 364 GLCKNSYIVEAVELFRTLR 382
G CKN + A LFR +
Sbjct: 575 GFCKNGDLDGAYTLFRKME 593
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 116/376 (30%), Positives = 186/376 (49%), Gaps = 12/376 (3%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 95
+++F+R++ P +++YN +++ G V R+ TP+ +FT +K
Sbjct: 95 AVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154
Query: 96 GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM-ASG--- 151
C SR A L + GCE NV Y T++ G Y LF +M ASG
Sbjct: 155 SFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSL 214
Query: 152 -----NGEFGV---EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
N V +G V + ++L ++ + P++ TY I+G C + + A ++
Sbjct: 215 CLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMV 274
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
++DQG +P+VVT+N ++ LCKN K EA L ++ G+ P++F YNTL+ G+C
Sbjct: 275 GRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKG 334
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
G V A+ + V+ G F+Y LI+G C E AL+L+ E L KGIKP+V++Y
Sbjct: 335 GMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
NTL L + A +L EM G+ + T+ ++GLCK + +A L + +
Sbjct: 395 NTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
Query: 384 LKCELDIRAYNCLIDG 399
DI +N LI G
Sbjct: 455 KGYFPDIFTFNILIHG 470
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 198/433 (45%), Gaps = 47/433 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV------ 68
P V S+N + L + ++D ++ R+ G+ PD+Y++ I + FC+ R
Sbjct: 109 PTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRL 168
Query: 69 -----------------------------SHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
G+ + G++L S + TF L+ LC
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCK 228
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE----- 154
+ + E L K+ G PN+FTYN I GL + G A+ + + +
Sbjct: 229 KGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVT 288
Query: 155 --FGVEGFVDKAK----ELFL-QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
+ + G +K E++L ++ +E + PD TY ++I G+C A+ +L+ +
Sbjct: 289 YNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAV 348
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
G P+ T+ ++D LC G+ + A L + + G++PN +YNTL+ G G +
Sbjct: 349 FNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLIL 408
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A +L M G V +++IL+NG CK + A L M+SKG PD+ +N L
Sbjct: 409 EAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
++E A ++ D M +GV D +TY + ++GLCK S + +E ++T+ C
Sbjct: 469 HGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCA 528
Query: 388 LDIRAYNCLIDGL 400
++ +N L++ L
Sbjct: 529 PNLFTFNILLESL 541
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 193/432 (44%), Gaps = 50/432 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L KN + +L + GL PD +TYN LI +CK G V +
Sbjct: 284 PDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERI 343
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + F P+ T+ SLI GLC E A ALF + G +PNV YNTLI GL
Sbjct: 344 LVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN 403
Query: 135 TGHTIVALNLFEEMAS----------------------------------GNGEFG---- 156
G + A L EM+ G F
Sbjct: 404 QGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFT 463
Query: 157 ----VEGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
+ G+ ++ A E+ M D ++PDV TY S++ G C + + + M+
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMV 523
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
++G PN+ TFN++++ LC+ K+D+A LL+ M V P+A + TL+DGFC G ++
Sbjct: 524 EKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583
Query: 268 RAKELFVSMESMGCTH-TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
A LF ME + + +Y+I+I+ + + + A L+ EM+ + + PD Y +
Sbjct: 584 GAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLM 643
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
+ V+ +K EM +G T I+ LC + EA + R+++
Sbjct: 644 VDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIH--RMVQK 701
Query: 387 ELDIRAYNCLID 398
L A N + D
Sbjct: 702 GLVPEAVNTIFD 713
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 157/346 (45%), Gaps = 58/346 (16%)
Query: 90 FTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
+ +K + ++ EA +F ++ + CEP VF+YN +++ L +
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDS-------------- 124
Query: 150 SGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
G+ D+A +++++M+D I PDV ++T ++ FC + + A LL M Q
Sbjct: 125 ---------GYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQ 175
Query: 210 GVQPNVV-----------------------------------TFNVIMDELCKNGKMDEA 234
G + NVV TFN ++ LCK G + E
Sbjct: 176 GCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKEC 235
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+LLD +I+ GV PN F YN + G C G ++ A + + G V +Y+ LI G
Sbjct: 236 EKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYG 295
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
CKN + + A G+++++G++PD YNTL + V+ A ++ +G D
Sbjct: 296 LCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPD 355
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+TYR+ IDGLC A+ LF + ++ YN LI GL
Sbjct: 356 EFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 193/390 (49%), Gaps = 27/390 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNST--GLFPDLYTYNILINCFCKMGRVSHGF 72
P + + ++L L K + +N T ++YN L+N CK +V F
Sbjct: 82 PDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLCKAKKVHQAF 141
Query: 73 VVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
+ ++ P+ V+++ LI G C + A L+ ++ C PNV TYN +NG
Sbjct: 142 AIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNG 201
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
L R G A ++EEM S +PDV+TY+++I GF
Sbjct: 202 LMRKGRIADAQGVYEEMISAG-----------------------CSPDVITYSTLIHGFS 238
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
A ++A L M+ +G +PN VT+N ++ LCK K DEA L M++ G P+
Sbjct: 239 LARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKV 298
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
Y TL+ GFC G++ +A E+F M S G V +Y+ L+ G+ + + A L+ M
Sbjct: 299 TYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVM 358
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD-GVAADTWTYRTFIDGLCKNSY 370
+S+ KPD V +N + L + +++ A ++F+ M++D G + D TY + I GLC
Sbjct: 359 VSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQR 418
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ EA+++F+ + LK D A+N L++ +
Sbjct: 419 LSEAMKVFKEIDRLKLSPDPHAFNVLLEAM 448
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/378 (31%), Positives = 184/378 (48%), Gaps = 27/378 (7%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
L K D+ LSL + + G PD+ T+++LIN CK ++ L + R+ T
Sbjct: 59 LCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRA 118
Query: 87 AVTFT--SLIKGLCAESRIMEAAALF-TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALN 143
+ F+ SL+ LC ++ +A A+F T + P+V +Y+ LI+G +
Sbjct: 119 SSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKID------- 171
Query: 144 LFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
E G +A++L+ QM D N P+V TY + + G +A+ +
Sbjct: 172 ----------ELG------RAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVY 215
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
EM+ G P+V+T++ ++ K D+A L + MI G RPNA YN L+ G C
Sbjct: 216 EEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKE 275
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
+ + A ELF M GC +Y+ L+ G+C +IE A+ ++ EM+SKG PDVV Y
Sbjct: 276 SKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAY 335
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF-RTLR 382
N L F + A +LF M DT ++ IDGL K + +AVE+F R +
Sbjct: 336 NCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQ 395
Query: 383 ILKCELDIRAYNCLIDGL 400
C D+ YN LI GL
Sbjct: 396 DHGCSPDLVTYNSLIFGL 413
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 181/365 (49%), Gaps = 18/365 (4%)
Query: 54 TYNILINCFCKMGRVSHGFVV---LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 110
+ + CK G++ F + L S P++ T S+I+ LC R+ A +L
Sbjct: 13 AWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLL 72
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM-----ASGNGEFGVEGFVD--- 162
+ G P++ T++ LIN L + A + M + F ++
Sbjct: 73 ETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLC 132
Query: 163 KAKE------LFLQMKDE-NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNV 215
KAK+ +F M E ++ PDVV+Y+ +I GFC ++ A+ L +M+D PNV
Sbjct: 133 KAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNV 192
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
T+N ++ L + G++ +A + + MI G P+ Y+TL+ GF L + ++A ELF +
Sbjct: 193 TTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEA 252
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
M S GC +Y+ L++G CK + + A L+ +M+ +G PD V Y TL + +
Sbjct: 253 MISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGK 312
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
+E+A ++FDEM G D Y + G + EA +LF+ + +C+ D ++N
Sbjct: 313 IEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNI 372
Query: 396 LIDGL 400
+IDGL
Sbjct: 373 MIDGL 377
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 161/332 (48%), Gaps = 24/332 (7%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F IF M++ R P V S++IL K L+K++ P++ TYN +N
Sbjct: 141 FAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLN 200
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+ GR++ V ++ + +P+ +T+++LI G + +A LF + GC P
Sbjct: 201 GLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRP 260
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
N TYN L++GL + E D+A ELF +M + +PD
Sbjct: 261 NAVTYNCLLHGLCK-----------------------ESKPDEAHELFRKMVERGCDPDK 297
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTYT+++ GFC +A + EM+ +G P+VV +N ++ + GK EA +L +
Sbjct: 298 VTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQV 357
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES-MGCTHTVFSYSILINGYCKNK 299
M+ +P+ +N ++DG R++ A E+F ME GC+ + +Y+ LI G C +
Sbjct: 358 MVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQ 417
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
+ A+ ++ E+ + PD +N L ++
Sbjct: 418 RLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMY 449
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ L + + +D LF+ + S G P+ TYN L++ CK + +
Sbjct: 225 PDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHEL 284
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ P+ VT+T+L+ G C +I +A +F ++ G +P+V YN L+ G +R
Sbjct: 285 FRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFR 344
Query: 135 TGHTIVALNLFEEMASG-------NGEFGVEGF-----VDKAKELFLQM-KDENINPDVV 181
G A LF+ M S + ++G +D A E+F +M +D +PD+V
Sbjct: 345 AGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLV 404
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
TY S+I G C +EA + E+ + P+ FNV+++ + G
Sbjct: 405 TYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 92/193 (47%), Gaps = 6/193 (3%)
Query: 214 NVVTFNVIMDELCKNGKMD---EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
N V + + LCK+GK++ EA R + + P++ ++++ C GRV+ A
Sbjct: 10 NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS-LYGEMLSKGIKPDVVI-YNTLFV 328
L +M G + ++S+LIN CK +I+ A L G + + YN+L
Sbjct: 70 SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLN 129
Query: 329 VLFEIHQVERAFKLFDEM-QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
L + +V +AF +F M V D +Y IDG CK + A +L++ + L C
Sbjct: 130 SLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV 189
Query: 388 LDIRAYNCLIDGL 400
++ YN ++GL
Sbjct: 190 PNVTTYNAFLNGL 202
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M++ + P V ++N L + LF+ + S PD ++NI+I+
Sbjct: 319 VFDEMVS-KGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGL 377
Query: 63 CKMGRVSHGFVVLGRILRS--CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
K R+ V R+ + C +P+ VT+ SLI GLC E R+ EA +F ++ P
Sbjct: 378 SKAKRLDDAVEVFERMEQDHGC-SPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSP 436
Query: 121 NVFTYNTLINGLYRTGH 137
+ +N L+ +Y GH
Sbjct: 437 DPHAFNVLLEAMYAAGH 453
>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
Length = 808
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/472 (27%), Positives = 220/472 (46%), Gaps = 87/472 (18%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + N + L K K D S+ +++ +G+ PDL+TY+++I+ CK + V
Sbjct: 167 PKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERV 226
Query: 75 LGRILRSCFTPNAVTFTSLIKG-----------------------------------LCA 99
L +++ + PN++T+ SLI G L
Sbjct: 227 LEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFK 286
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG--------HTIVALNLFEEMASG 151
R EA +F + + G +P++ +Y+T+++G Y T H I L L + +A
Sbjct: 287 HGRTNEAKCIFDSMVLKGPKPDIISYSTMLHG-YATATDSCLADVHNIFNLMLTKGIAPN 345
Query: 152 NGEFGVE-------GFVDKAKELFLQMKDENINPDVVTYTSVI----------------- 187
F + G +DKA +F M+++ + PD VT+ +VI
Sbjct: 346 KHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFN 405
Query: 188 ------------------RGFCYANDWNEAKCLLIEMMDQGVQP-NVVTFNVIMDELCKN 228
+G C + +AK L+ EMM++ + P V F+ I++ LCK
Sbjct: 406 HMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKE 465
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G++ E ++D+M+Q G RPN +N+LM+G+CL G + A L +M S+G + Y
Sbjct: 466 GRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIY 525
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
L++GYCKN I+ AL+++ +ML KG+KP V+Y+ + LF+ + A K+F EM
Sbjct: 526 GTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIE 585
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G TY + GLC+N+ EA L L + + DI +N +I +
Sbjct: 586 SGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 637
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 194/410 (47%), Gaps = 14/410 (3%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFG-CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
CIFD M+ P P + +L G A + V ++F + + G+ P+ + +NILIN
Sbjct: 295 CIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILIN 354
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+ + G + ++ + P+ VTF ++I LC R+ +A F + G P
Sbjct: 355 AYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPP 414
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGN-GEFGV------------EGFVDKAKEL 167
+ Y LI G G + A L EM + + GV EG V + K++
Sbjct: 415 SEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDI 474
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
M P+VVT+ S++ G+C + EA LL M G++PN + ++D CK
Sbjct: 475 MDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCK 534
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
NG++D+A + M+ GV+P + +Y+ ++ G R AK++F M G T ++ +
Sbjct: 535 NGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHT 594
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y +++ G C+N + A L ++ + +K D++ +N + +F++ + + A +LFD +
Sbjct: 595 YGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAIS 654
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
G+ + TY I L K EA LF ++ D R N ++
Sbjct: 655 TYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 704
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 199/455 (43%), Gaps = 84/455 (18%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTY--------------- 55
R SPP + ++NIL C + D L++ RL GL PD ++Y
Sbjct: 94 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKA 153
Query: 56 -------------------NILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 96
N +I CKM + ++ +++ S P+ T++ +I G
Sbjct: 154 HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 213
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG 156
LC + +A + ++ G PN TYN+LI+G +G ++ +F++M+S
Sbjct: 214 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 273
Query: 157 VE------------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND--------- 195
V+ G ++AK +F M + PD+++Y++++ G+ A D
Sbjct: 274 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNI 333
Query: 196 ----------------------------WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
++A + +M ++G+ P+ VTF ++ LC+
Sbjct: 334 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 393
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
G++D+A + M+ IGV P+ VY L+ G C G + +AKEL M +
Sbjct: 394 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK 453
Query: 288 Y-SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
Y S +IN CK + + M+ G +P+VV +N+L + +E AF L D M
Sbjct: 454 YFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAM 513
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
G+ + + Y T +DG CKN I +A+ +FR +
Sbjct: 514 ASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDM 548
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 175/352 (49%), Gaps = 26/352 (7%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
P ++TYNILI+C+ ++ R G ++GR+L++ P+ ++ SLI G + + +A L
Sbjct: 98 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 156
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL 169
F ++ G P + N++I L + +EM DKA+ +
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCK----------MKEM-------------DKAESIVQ 193
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M D I PD+ TY+ +I G C + ++A+ +L +M++ G +PN +T+N ++ +G
Sbjct: 194 KMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISG 253
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+E+ R+ M GV P N+ + GR N AK +F SM G + SYS
Sbjct: 254 MWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYS 313
Query: 290 ILINGYCKNKE--IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
+++GY + + +++ ML+KGI P+ ++N L +++A +F++MQ
Sbjct: 314 TMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQ 373
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G+ DT T+ T I LC+ + +A+ F + + Y CLI G
Sbjct: 374 NKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQG 425
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 168/389 (43%), Gaps = 57/389 (14%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF+ ML + P FNIL A+ D + +F+ + + G+ PD T+ +I+
Sbjct: 333 IFNLMLT-KGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSL 391
Query: 63 CKMGRV------------------------------SHGFVVLGRIL------RSCFTPN 86
C++GR+ +HG +V + L + P
Sbjct: 392 CRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPG 451
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
F+S+I LC E R+ E + + G PNV T+N+L+ G G+ A L +
Sbjct: 452 VKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLD 511
Query: 147 EMASGNGEFGVE----------------GFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
MAS G+E G +D A +F M + + P V Y+ ++ G
Sbjct: 512 AMAS----IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGL 567
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
A AK + EM++ G ++ T+ V++ LC+N DEA+ LL+ + + V+ +
Sbjct: 568 FQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDI 627
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
+N ++ GR AKELF ++ + G + +YS++I K + E A +L+
Sbjct: 628 ITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFIS 687
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
+ G D + N + +L +V +A
Sbjct: 688 VEKSGHASDSRLLNHIVRMLLNKAEVAKA 716
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 128/309 (41%), Gaps = 12/309 (3%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+N PP V F+ + L K + + TG P++ T+N L+ +C +G
Sbjct: 442 MMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVG 501
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ F +L + PN + +L+ G C RI +A +F + G +P Y+
Sbjct: 502 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYS 561
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDE 174
+++GL++ T A +F EM + + D+A L ++
Sbjct: 562 IILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAM 621
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
N+ D++T+ VI EAK L + G+ PN+ T+++++ L K +EA
Sbjct: 622 NVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEA 681
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
L + + G ++ + N ++ V +A + T + S+L +
Sbjct: 682 DNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASL 741
Query: 295 YCKNKEIEG 303
+ + I+G
Sbjct: 742 FSREGMIKG 750
>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
Length = 864
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/472 (27%), Positives = 220/472 (46%), Gaps = 87/472 (18%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + N + L K K D S+ +++ +G+ PDL+TY+++I+ CK + V
Sbjct: 223 PKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERV 282
Query: 75 LGRILRSCFTPNAVTFTSLIKG-----------------------------------LCA 99
L +++ + PN++T+ SLI G L
Sbjct: 283 LEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFK 342
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG--------HTIVALNLFEEMASG 151
R EA +F + + G +P++ +Y+T+++G Y T H I L L + +A
Sbjct: 343 HGRTNEAKCIFDSMVLKGPKPDIISYSTMLHG-YATATDSCLADVHNIFNLMLTKGIAPN 401
Query: 152 NGEFGVE-------GFVDKAKELFLQMKDENINPDVVTYTSVI----------------- 187
F + G +DKA +F M+++ + PD VT+ +VI
Sbjct: 402 KHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFN 461
Query: 188 ------------------RGFCYANDWNEAKCLLIEMMDQGVQP-NVVTFNVIMDELCKN 228
+G C + +AK L+ EMM++ + P V F+ I++ LCK
Sbjct: 462 HMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKE 521
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G++ E ++D+M+Q G RPN +N+LM+G+CL G + A L +M S+G + Y
Sbjct: 522 GRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIY 581
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
L++GYCKN I+ AL+++ +ML KG+KP V+Y+ + LF+ + A K+F EM
Sbjct: 582 GTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIE 641
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G TY + GLC+N+ EA L L + + DI +N +I +
Sbjct: 642 SGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 693
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 194/410 (47%), Gaps = 14/410 (3%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFG-CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
CIFD M+ P P + +L G A + V ++F + + G+ P+ + +NILIN
Sbjct: 351 CIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILIN 410
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+ + G + ++ + P+ VTF ++I LC R+ +A F + G P
Sbjct: 411 AYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPP 470
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGN-GEFGV------------EGFVDKAKEL 167
+ Y LI G G + A L EM + + GV EG V + K++
Sbjct: 471 SEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDI 530
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
M P+VVT+ S++ G+C + EA LL M G++PN + ++D CK
Sbjct: 531 MDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCK 590
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
NG++D+A + M+ GV+P + +Y+ ++ G R AK++F M G T ++ +
Sbjct: 591 NGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHT 650
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y +++ G C+N + A L ++ + +K D++ +N + +F++ + + A +LFD +
Sbjct: 651 YGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAIS 710
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
G+ + TY I L K EA LF ++ D R N ++
Sbjct: 711 TYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 760
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 199/455 (43%), Gaps = 84/455 (18%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTY--------------- 55
R SPP + ++NIL C + D L++ RL GL PD ++Y
Sbjct: 150 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKA 209
Query: 56 -------------------NILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 96
N +I CKM + ++ +++ S P+ T++ +I G
Sbjct: 210 HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 269
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG 156
LC + +A + ++ G PN TYN+LI+G +G ++ +F++M+S
Sbjct: 270 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 329
Query: 157 VE------------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND--------- 195
V+ G ++AK +F M + PD+++Y++++ G+ A D
Sbjct: 330 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNI 389
Query: 196 ----------------------------WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
++A + +M ++G+ P+ VTF ++ LC+
Sbjct: 390 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 449
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
G++D+A + M+ IGV P+ VY L+ G C G + +AKEL M +
Sbjct: 450 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK 509
Query: 288 Y-SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
Y S +IN CK + + M+ G +P+VV +N+L + +E AF L D M
Sbjct: 510 YFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAM 569
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
G+ + + Y T +DG CKN I +A+ +FR +
Sbjct: 570 ASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDM 604
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 191/400 (47%), Gaps = 37/400 (9%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDT-------VLSLFKRLNSTGLF----PDLYTYNILINC 61
+P P + N + LA+ + LFKR++ P ++TYNILI+C
Sbjct: 106 APVPARALNGILAALARAPPSAACGDAPALAIELFKRMDRWACPRHSPPTIHTYNILIDC 165
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
+ ++ R G ++GR+L++ P+ ++ SLI G + + +A LF ++ G P
Sbjct: 166 YRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPK 224
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
+ N++I L + +EM DKA+ + +M D I PD+
Sbjct: 225 ILICNSIIKELCK----------MKEM-------------DKAESIVQKMVDSGIAPDLF 261
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY+ +I G C + ++A+ +L +M++ G +PN +T+N ++ +G +E+ R+ M
Sbjct: 262 TYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM 321
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE- 300
GV P N+ + GR N AK +F SM G + SYS +++GY +
Sbjct: 322 SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDS 381
Query: 301 -IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
+ +++ ML+KGI P+ ++N L +++A +F++MQ G+ DT T+
Sbjct: 382 CLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFA 441
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
T I LC+ + +A+ F + + Y CLI G
Sbjct: 442 TVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQG 481
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 155/336 (46%), Gaps = 23/336 (6%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F++M+++ P ++ GC + + + +N P + ++ +IN C
Sbjct: 460 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC 519
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K GRV+ G ++ ++++ PN VTF SL++G C + EA AL + G EPN +
Sbjct: 520 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCY 579
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
Y TL++G + G +D A +F M + + P V Y
Sbjct: 580 IYGTLVDGYCKNGR-----------------------IDDALTVFRDMLHKGVKPTSVLY 616
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
+ ++ G A AK + EM++ G ++ T+ V++ LC+N DEA+ LL+ +
Sbjct: 617 SIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFA 676
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
+ V+ + +N ++ GR AKELF ++ + G + +YS++I K + E
Sbjct: 677 MNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEE 736
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
A +L+ + G D + N + +L +V +A
Sbjct: 737 ADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKA 772
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 128/309 (41%), Gaps = 12/309 (3%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+N PP V F+ + L K + + TG P++ T+N L+ +C +G
Sbjct: 498 MMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVG 557
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ F +L + PN + +L+ G C RI +A +F + G +P Y+
Sbjct: 558 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYS 617
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDE 174
+++GL++ T A +F EM + + D+A L ++
Sbjct: 618 IILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAM 677
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
N+ D++T+ VI EAK L + G+ PN+ T+++++ L K +EA
Sbjct: 678 NVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEA 737
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
L + + G ++ + N ++ V +A + T + S+L +
Sbjct: 738 DNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASL 797
Query: 295 YCKNKEIEG 303
+ + I+G
Sbjct: 798 FSREGMIKG 806
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/382 (32%), Positives = 185/382 (48%), Gaps = 12/382 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ +L L + D + LF ++ S+ PD TY L++ F G + +
Sbjct: 297 PDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKI 356
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + P+ VTFT L+ LC RI EA L +R G PN+ TYNTLI+GL R
Sbjct: 357 WTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLR 416
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
AL+LF M S E G G KA E F +MK I P++V
Sbjct: 417 ANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVA 476
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ + EAK + E+ G+ P+ VT+N++M K G++DEA +LL M
Sbjct: 477 CNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMS 536
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
++ P+ V N+L+D GRV A ++F ME M TV +Y+IL+ G K +I+
Sbjct: 537 KVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQ 596
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ L+ M G P+ + +NTL L + +V+ A K+F +M D T+ T I
Sbjct: 597 KAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTII 656
Query: 363 DGLCKNSYIVEAVELFRTLRIL 384
G K + I A+ LF ++ L
Sbjct: 657 HGFIKQNQIKNAIWLFHQMKKL 678
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 198/421 (47%), Gaps = 58/421 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +F+ L K ++ TV+ L + + S GL P++YTY I I + G++ + +
Sbjct: 227 PSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRI 286
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R+ P+ VT+T LI LC ++ +A LFTK++ +P+ TY TL++
Sbjct: 287 MKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSD 346
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
GH +DK ++++ +M+ + PDVVT+T ++ C A
Sbjct: 347 CGH-----------------------LDKVEKIWTEMEADGYAPDVVTFTILVNALCKAG 383
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
NEA LL M QGV PN+ T+N ++ L + ++D+A L M +GV P A+ Y
Sbjct: 384 RINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYI 443
Query: 255 TLMD-----------------------------------GFCLTGRVNRAKELFVSMESM 279
L+D GR+ AK +F ++S
Sbjct: 444 LLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSS 503
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G +Y++++ Y K +++ A+ L EM +PDV++ N+L L++ +VE A
Sbjct: 504 GLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEA 563
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+++F M+ +A TY + GL K I +AV+LF ++ C + +N L+D
Sbjct: 564 WQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDC 623
Query: 400 L 400
L
Sbjct: 624 L 624
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 191/382 (50%), Gaps = 23/382 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S+N L L ++ L +++R+ S GL P L T++ L+ K + +L +
Sbjct: 196 SYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEM 255
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PN T+T I+ L + +I EA + ++ GC P+V TY LI+ L
Sbjct: 256 ESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARK- 314
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+D A LF +MK + PD VTY +++ F ++
Sbjct: 315 ----------------------LDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDK 352
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
+ + EM G P+VVTF ++++ LCK G+++EA LLD M + GV PN YNTL+
Sbjct: 353 VEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLIS 412
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G R++ A +LF +MES+G T ++Y +LI+ + K+ AL + +M ++GI P
Sbjct: 413 GLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAP 472
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
++V N L E+ ++ A +F+E++ G+A D+ TY + K + EA++L
Sbjct: 473 NIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLL 532
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
+ ++CE D+ N LID L
Sbjct: 533 SEMSKVQCEPDVIVINSLIDTL 554
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 198/475 (41%), Gaps = 83/475 (17%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM-- 65
+N P +FN L CL KN D L +F ++ + PD+ T+N +I+ F K
Sbjct: 605 MNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQ 664
Query: 66 --------------------------------GRVSHGFV-------------------- 73
G++ F
Sbjct: 665 IKNAIWLFHQMKKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWED 724
Query: 74 VLGRILRSCFTPNAVTF----------------TSLIKGLCAESRIMEAAALFTKL-RVF 116
V+G IL T A+ F +IK LC + A +F K +
Sbjct: 725 VMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKEL 784
Query: 117 GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKA 164
G +P + YN LI+G + VA NLFEEM S G G +++
Sbjct: 785 GVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINEL 844
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
+L+ +M P+ +TY VI +N ++A L ++ P TF ++D
Sbjct: 845 FDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDG 904
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
L K+G++D+A + D M+ G RPN+ +YN L++G+ G V+ A E F M G
Sbjct: 905 LLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPD 964
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
+ SY+IL++ C ++ AL + ++ G+ PD+V YN + L + E A LF
Sbjct: 965 LKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFH 1024
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
EMQ G+ D +TY + I L I EA +++ L+ + + ++ YN LI G
Sbjct: 1025 EMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRG 1079
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 191/410 (46%), Gaps = 21/410 (5%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P + + N LA+ ++F L S+GL PD TYN+++ C+ K+G+
Sbjct: 465 MKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQ 524
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V +L + + P+ + SLI L R+ EA +F ++ P V TYN
Sbjct: 525 VDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNI 584
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDEN 175
L+ GL + G A+ LFE M F VD A ++F +M N
Sbjct: 585 LLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMN 644
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
PDV+T+ ++I GF N A L M + ++P+ VT ++ + K+G++++A
Sbjct: 645 CRPDVLTFNTIIHGFIKQNQIKNA-IWLFHQMKKLLRPDHVTLCTLLPGVIKSGQIEDAF 703
Query: 236 RLL-DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL--- 291
R+ D Q+G + + +M G +A + E + C S+L
Sbjct: 704 RITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKA---ILFGERLVCRAICKDDSVLIPI 760
Query: 292 INGYCKNKEIEGALSLYGEMLSK-GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
I CK+K+ A +++ + + G+KP + +YN L E+H VE A+ LF+EM+ G
Sbjct: 761 IKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAG 820
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
A DT+TY + ID K+ I E +L+ + C+ + YN +I L
Sbjct: 821 CAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNL 870
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 193/435 (44%), Gaps = 50/435 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++NIL L K + LF+ +N G P+ T+N L++C CK V +
Sbjct: 577 PTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKM 636
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ P+ +TF ++I G +++I A LF +++ P+ T TL+ G+ +
Sbjct: 637 FYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIK 695
Query: 135 TGHTIVALNLFEE-----------------MASGNGEFGVEGFV---------------- 161
+G A + E+ M E G E +
Sbjct: 696 SGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDS 755
Query: 162 ---------------DKAKELFLQMKDE-NINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
A+ +F++ E + P + Y +I GF ++ A L E
Sbjct: 756 VLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEE 815
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M G P+ T+N ++D K+GK++E L D M+ G +PN YN ++ + R
Sbjct: 816 MKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNR 875
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
+++A +L+ ++ S + T ++ LI+G K+ ++ A ++ M+ G +P+ IYN
Sbjct: 876 LDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNI 935
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L ++ V+ A + F M ++G+ D +Y +D LC + +A+ F L+
Sbjct: 936 LVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAG 995
Query: 386 CELDIRAYNCLIDGL 400
+ D+ AYN +I+GL
Sbjct: 996 LDPDLVAYNLMINGL 1010
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 159/325 (48%), Gaps = 14/325 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +N+L + + + +LF+ + S G PD +TYN LI+ K G+++ F +
Sbjct: 788 PTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDL 847
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+L PN +T+ +I L +R+ +A L+ L P T+ LI+GL +
Sbjct: 848 YDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLK 907
Query: 135 TGHTIVALNLFEEMAS-------------GNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
+G A +F+ M NG +G G VD A E F +M E I PD+
Sbjct: 908 SGRLDDAHEMFDGMVHYGCRPNSAIYNILVNG-YGKLGHVDTACEFFKRMVKEGIRPDLK 966
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+YT ++ C A ++A ++ G+ P++V +N++++ L ++ + +EA L M
Sbjct: 967 SYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEM 1026
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
G+ P+ + YN+L+ + G + A +++ ++ +G VF+Y+ LI GY +
Sbjct: 1027 QNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNS 1086
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTL 326
E A +Y +M+ G P+ + L
Sbjct: 1087 ELAYGIYKKMMVGGCDPNTGTFAQL 1111
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 137/291 (47%), Gaps = 12/291 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L K+ + + L+ + + G P+ TYN++I+ K R+ +
Sbjct: 823 PDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDL 882
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ F+P TF LI GL R+ +A +F + +GC PN YN L+NG +
Sbjct: 883 YYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGK 942
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
GH A F+ M + G VD A F ++K ++PD+V
Sbjct: 943 LGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVA 1002
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I G + EA L EM ++G+ P++ T+N ++ L G ++EA ++ + +
Sbjct: 1003 YNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQ 1062
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
IG++PN F YN L+ G+ L+G A ++ M GC +++ L N
Sbjct: 1063 FIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQLPN 1113
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 121/244 (49%)
Query: 157 VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
+ G + +A +M++ + +Y +I + EA + M+ +G++P++
Sbjct: 171 IRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLK 230
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
TF+ +M K + LL+ M +G+RPN + Y + G+++ A + M
Sbjct: 231 TFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRM 290
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
+ GC V +Y++LI+ C ++++ A+ L+ +M S KPD V Y TL + +
Sbjct: 291 DDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHL 350
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
++ K++ EM+ DG A D T+ ++ LCK I EA +L T+R ++ YN L
Sbjct: 351 DKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTL 410
Query: 397 IDGL 400
I GL
Sbjct: 411 ISGL 414
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 92/193 (47%)
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M Q ++ NV T+ +I L G + +A L+ M + G NA+ YN L+ +G
Sbjct: 150 MQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGF 209
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
A E++ M S G ++ ++S L+ K + I+ + L EM S G++P++ Y
Sbjct: 210 CKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTI 269
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
VL +++ A+++ M DG D TY ID LC + +A+ LF ++
Sbjct: 270 CIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSS 329
Query: 386 CELDIRAYNCLID 398
+ D Y L+D
Sbjct: 330 HKPDKVTYVTLLD 342
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 14/200 (7%)
Query: 210 GVQPNVV----TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
G PNVV T N +++ L + ++++ + + DLM + +R N Y + + G
Sbjct: 115 GELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGG 174
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILIN-----GYCKNKEIEGALSLYGEMLSKGIKPDV 320
+ +A M G +SY+ LI+ G+CK AL +Y M+S+G+KP +
Sbjct: 175 LRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKE-----ALEVYRRMVSEGLKPSL 229
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
++ L V + ++ L +EM+ G+ + +TY I L ++ I EA + +
Sbjct: 230 KTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKR 289
Query: 381 LRILKCELDIRAYNCLIDGL 400
+ C D+ Y LID L
Sbjct: 290 MDDDGCGPDVVTYTVLIDAL 309
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 185/386 (47%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +N L + K+ D SLF + GLFP+ TY+ILI+ FCK G++
Sbjct: 353 PSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHF 412
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
LG++ ++SLI G C ++ A +LF ++ G +PNV Y +LI+G +
Sbjct: 413 LGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCK 472
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G A L+ EM +G G I+P+ T+T++I G C+AN
Sbjct: 473 EGELHNAFRLYHEM-TGKG----------------------ISPNTYTFTALISGLCHAN 509
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EA L EM++ V PN VT+NV+++ CK G A LLD M++ G+ P+ + Y
Sbjct: 510 RMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYR 569
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ G C TGRV+ A+E ++ +S L++GYCK ++ AL EML +
Sbjct: 570 PLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGR 629
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+ D+V Y+ L + L +M G+ D Y T ID K + A
Sbjct: 630 GVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMA 689
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
L+ + C ++ Y LI+GL
Sbjct: 690 FGLWDIMVSEGCLPNVVTYTALINGL 715
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 199/436 (45%), Gaps = 55/436 (12%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + + + L + + + L LF + S+GL PD+Y Y ++ C++ V
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+GR+ S + T+ I+GLC R+ EA + L G +V TY TL+ GL +
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCK 297
Query: 135 TGHTIVALNLFEEMASGNGEFGV----------------EGFVDKAKELFLQMKDENINP 178
+ EEM + EFG +G + A +L ++K + P
Sbjct: 298 ----VEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAP 353
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
+ Y ++I C +EA+ L M +G+ PN VT+++++D CK GK+D A L
Sbjct: 354 SLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFL 413
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
M ++G++ + Y++L+ G C G++ AK LF M + G V Y+ LI+GYCK
Sbjct: 414 GKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKE 473
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTL-------------------------------F 327
E+ A LY EM KGI P+ + L +
Sbjct: 474 GELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTY 533
Query: 328 VVLFEIHQVE----RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
VL E H E RAF+L DEM G+ DT+TYR I GLC + EA E L+
Sbjct: 534 NVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQG 593
Query: 384 LKCELDIRAYNCLIDG 399
+ +L+ ++ L+ G
Sbjct: 594 EQQKLNEMCFSALLHG 609
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 197/393 (50%), Gaps = 14/393 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F++L +N+ L + + + G+ P + T + ++N ++ + + I+
Sbjct: 148 FDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIV 207
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
S P+ +T++++ LC + A + ++ GC+ +V TYN I GL +
Sbjct: 208 SSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVW 267
Query: 140 VALNL-----FEEMASGNGEF--------GVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
A+ + ++ + + G + VE F + +E+ +M + P +++
Sbjct: 268 EAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEF-EAGEEMMNEMIEFGFVPSEAAVSNL 326
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
+ G + A L+ ++ GV P++ +N +++ +CK+GK+DEA L + M G+
Sbjct: 327 VDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGL 386
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
PN Y+ L+D FC G+++ A M +G TV+ YS LI+G+CK ++ A S
Sbjct: 387 FPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKS 446
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L+ EM++ G+KP+VVIY +L + ++ AF+L+ EM G++ +T+T+ I GLC
Sbjct: 447 LFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLC 506
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + EA +LF + + YN LI+G
Sbjct: 507 HANRMAEANKLFGEMVEWNVIPNEVTYNVLIEG 539
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 175/374 (46%), Gaps = 13/374 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N+L K + L + GL PD YTY LI+ C GRVS
Sbjct: 528 PNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREF 587
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + N + F++L+ G C E R+ +A ++ G ++ Y+ LI G+ R
Sbjct: 588 MNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILR 647
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
++L ++M G + A L+ M E P+VVT
Sbjct: 648 QQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVT 707
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT++I G C ++A+ L EM+ PN T+ +D L G +++A +L D+++
Sbjct: 708 YTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLL 767
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G N YN L+ GFC GR+ A E+ V+M G + SYS +I YC+ +++
Sbjct: 768 E-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLK 826
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ L+ ML++G+ PD V YN L ++ +AF+L D+M R GV + TY + I
Sbjct: 827 EAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLI 886
Query: 363 DGLCKNSYIVEAVE 376
G C S + +
Sbjct: 887 HGTCLMSSVSSTAD 900
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 183/443 (41%), Gaps = 47/443 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+ P V + L K L+ + G+ P+ YT+ LI+
Sbjct: 447 LFDEMI-ANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGL 505
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C R++ + G ++ PN VT+ LI+G C E + A L ++ G P+
Sbjct: 506 CHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDT 565
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG------------VEGFVDKAKELFLQ 170
+TY LI+GL TG A ++ + EG +D A + +
Sbjct: 566 YTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACRE 625
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + D+V Y+ +I G D LL +M DQG++P+ V + ++D K G
Sbjct: 626 MLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGN 685
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA----KELFVS----------- 275
+ A L D+M+ G PN Y L++G C G +++A +E+ S
Sbjct: 686 LKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYAC 745
Query: 276 ----------MESMGCTHTVF---------SYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+E H V +Y+ILI G+CK I+ A + M+ GI
Sbjct: 746 FLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGI 805
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
PD + Y+T+ ++ A KL++ M GV DT Y I G C + +A E
Sbjct: 806 SPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFE 865
Query: 377 LFRTLRILKCELDIRAYNCLIDG 399
L + + + YN LI G
Sbjct: 866 LRDDMMRRGVKPNRATYNSLIHG 888
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%)
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
MMD G+ P + T + +++ L + + A L D ++ G+RP+ +VY ++ C
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
RA+E+ MES GC +V +Y++ I G CKN+ + A+ + + KG++ DV Y T
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L + L ++ + E ++ +EM G +DGL K I A +L ++
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350
Query: 386 CELDIRAYNCLIDGL 400
+ YN LI+ +
Sbjct: 351 VAPSLFVYNALINSM 365
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 51/117 (43%)
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
T + +LI Y +N+ L + M+ GI P + + + L I Q A LF
Sbjct: 144 TTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLF 203
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
DE+ G+ D + Y + LC+ + A E+ + C+L + YN I GL
Sbjct: 204 DEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGL 260
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Query: 5 DYMLNMRPS--PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ ++NM S P S++ + + + L++ + + G+ PD YN LI
Sbjct: 795 EVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGC 854
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA 107
C G ++ F + ++R PN T+ SLI G C S + A
Sbjct: 855 CVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTA 899
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 194/396 (48%), Gaps = 12/396 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +FNI+ L K + ++G+ P++ TYN +++ +C GRV +L
Sbjct: 221 VYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILT 280
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ R P++ T+ SLI G+C + R+ EA+ +F ++ G P+ YNTLI+G G
Sbjct: 281 TMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKG 340
Query: 137 HTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
+ +A +EM +E D+A+ + +++++ I+PD +TY
Sbjct: 341 NLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYN 400
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+I G+C + +A L EM+ G++P T+ ++ L K +M EA L +
Sbjct: 401 ILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE 460
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
GV P+A ++N L+DG C V A EL M+ M +++ ++ G+C+ ++E A
Sbjct: 461 GVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEA 520
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L+ EM +GIKPD + +NTL ++ AF++ +EM G TY + G
Sbjct: 521 RELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQG 580
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LCKN A EL + + D Y LI+G+
Sbjct: 581 LCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 196/392 (50%), Gaps = 25/392 (6%)
Query: 34 DTVLSLFKRLNSTG----LFPDL---------YTYNILINCFCKMGRVSHGFVVLGRILR 80
+++LSLF +LN T L+ ++ YT+NI+IN CK G++ +G +
Sbjct: 190 NSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMET 249
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
S PN VT+ +++ G C+ R+ A A+ T ++ EP+ FTY +LI+G+ + G
Sbjct: 250 SGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEE 309
Query: 141 ALNLFEEMASGNGEFG-------VEGFVDKAK-ELFLQMKDE----NINPDVVTYTSVIR 188
A +FEEM ++GF +K ++ KDE I+P + TY S+I
Sbjct: 310 ASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIH 369
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
+EA+C++ E+ ++G+ P+ +T+N++++ C+ +A L D M+ G++P
Sbjct: 370 ALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKP 429
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
Y +L+ R+ A +LF + S G ++ LI+G+C N ++GA L
Sbjct: 430 TKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELL 489
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
+M + PD V +NT+ +VE A +LFDEM+R G+ D ++ T I G +
Sbjct: 490 KDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRR 549
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I +A + + + YN L+ GL
Sbjct: 550 GDIKDAFRVRNEMLDTGFNPTVLTYNALVQGL 581
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 175/366 (47%), Gaps = 23/366 (6%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
D F + G+ P + T N L++ F K+ R +V+ + R + TF +
Sbjct: 168 DEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIM 227
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG 153
I LC E ++ +A + G +PN+ TYNT+++G
Sbjct: 228 INVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHG---------------------- 265
Query: 154 EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
+ G V+ A + MK + I PD TY S+I G C EA + EM+ +G++P
Sbjct: 266 -YCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRP 324
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
+ V +N ++D C G +D AS D M++ G+ P YN+L+ + R + A+ +
Sbjct: 325 SAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMI 384
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
++ G + +Y+ILINGYC+ + A L+ EML+ GIKP Y +L VL +
Sbjct: 385 KEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKK 444
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
++++ A LF ++ +GV D + IDG C NS + A EL + + +K D +
Sbjct: 445 NRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTF 504
Query: 394 NCLIDG 399
N ++ G
Sbjct: 505 NTIMQG 510
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 112/235 (47%), Gaps = 28/235 (11%)
Query: 1 FCIFDYML--NMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNIL 58
F + D ML ++P+ ++ L L+K LFK++ S G+ PD +N L
Sbjct: 416 FLLHDEMLASGIKPTKK---TYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNAL 472
Query: 59 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC 118
I+ C V F +L + R P+ VTF ++++G C E ++ EA LF +++ G
Sbjct: 473 IDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGI 532
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINP 178
+P+ ++NTLI+G R G A + EM D NP
Sbjct: 533 KPDHISFNTLISGYSRRGDIKDAFRVRNEML-----------------------DTGFNP 569
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
V+TY ++++G C + + A+ LL EM+ +G+ P+ T+ +++ + K DE
Sbjct: 570 TVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%)
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
++ V++ L+ C R + A E F +M+ G T+ + + L++ + K E A LY
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
EM IK V +N + VL + ++++A M+ GV + TY T + G C +
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ A + T++ K E D Y LI G+
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGM 301
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/336 (34%), Positives = 168/336 (50%), Gaps = 23/336 (6%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
PD TY ++ CK R+ + + P+A + ++ GLC E ++ EA L
Sbjct: 112 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 171
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL 169
F K+ PNV TYNTLINGL + A LF+EMA +G+V
Sbjct: 172 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAG-------KGYV-------- 216
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
P V+Y ++I GFC D AK + +M+ PNVVT+ ++D L K+G
Sbjct: 217 --------PTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSG 268
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+ A+ +LD M++ GV PN Y+ L+DGFC RV+ A +L M + G TV +Y+
Sbjct: 269 KVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYN 328
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
IL+N C+ ++E A L+ M + P VV YNTL L Q++ A +L+ EM
Sbjct: 329 ILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAK 388
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
G D TY T GL + + EA EL +++ K
Sbjct: 389 GCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTK 424
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 194/405 (47%), Gaps = 13/405 (3%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ +R P +FN + AK + V +++ + G Y ILI+C CK+G
Sbjct: 1 MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ +L + F A+ ++++I LC +R+ EA L K+ + P+ TY
Sbjct: 61 FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGP 119
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGE-------FGVEGF-----VDKAKELFLQMKDEN 175
++ L +T AL EEMA+ + F + G V++A+ LF +M +
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
INP+VVTY ++I G C A A L EM +G P V++N ++D CK + A
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+ D M++ PN Y TL+DG +G+V A E+ M G T V +YS LI+G+
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
CK + ++ A L +M+++GI P VV YN L L ++E AFKLF M +
Sbjct: 300 CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTV 359
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY T + LC + + A L+ + C D Y+ L GL
Sbjct: 360 VTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGL 404
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 173/337 (51%), Gaps = 23/337 (6%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R +PP ++ + L K K D L+ + + + G+ PD + YN +++ C+ +V
Sbjct: 108 RYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEE 167
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
++ ++++ PN VT+ +LI GLC RI A LF ++ G P +YNTLI+
Sbjct: 168 ARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLID 227
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
G + + A ++F++M N P+VVTYT++I G
Sbjct: 228 GFCKKKDLVAAKDVFDKMVRS-----------------------NCVPNVVTYTTLIDGL 264
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
+ A +L M+ +GV PNV T++ ++D CK ++DEA +LL+ M+ G+ P
Sbjct: 265 SKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTV 324
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
YN L++ C ++ A +LF M C TV +Y+ L+ C +K+++GA LY E
Sbjct: 325 VTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAE 384
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
M++KG PD + Y+TL L +V A +L ++M+
Sbjct: 385 MIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++NIL L + + LF+ + P + TYN L+ C ++ +
Sbjct: 322 PTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRL 381
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
++ P+A+T+ +L GL ++ EA L K+++ P
Sbjct: 382 YAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/399 (32%), Positives = 192/399 (48%), Gaps = 16/399 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N G L + D L + K + GL PD +TY +L++ FCK R ++
Sbjct: 274 PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLI 333
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ S PN T+T+LI G E I EA + ++ G + NV TYN +I G+ +
Sbjct: 334 FESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAK 393
Query: 135 TGHTIVALNLFEEMASGNGE-------FGVEGFVD-----KAKELFLQMKDENINPDVVT 182
G A++LF EM E ++G++ KA EL +MK + P T
Sbjct: 394 AGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFT 453
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+ +I G C+++D +A +L +M+ GV+PNV + ++ + + + A LL +MI
Sbjct: 454 YSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMI 513
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
GV P+ F YN L+ G C +V AK L V M G +Y IN Y K+ EI+
Sbjct: 514 ANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQ 573
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A + +MLS GI P+ VIY L ++ A F M G+ D Y I
Sbjct: 574 VAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAII 633
Query: 363 DGLCKNSYIVEAVELFRTLRILKCEL--DIRAYNCLIDG 399
L KN EA+ +F L+ LK + D+ YN LI G
Sbjct: 634 HSLSKNGKTKEAMGVF--LKFLKTGVVPDVFLYNSLISG 670
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 187/385 (48%), Gaps = 25/385 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++N + G +AK +SLF + G+ PD +TYN+LI+ + K ++ +L
Sbjct: 381 VVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLA 440
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ TP+ T++ LI GLC S + +A + ++ G +PNVF Y TLI +
Sbjct: 441 EMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQES 500
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+A+ L + M + NG + PD+ Y +I G C A
Sbjct: 501 RYEMAIELLKIMIA-NG----------------------VLPDLFCYNCLIIGLCRAKKV 537
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
EAK LL++M ++G++PN T+ ++ K+G++ A R M+ G+ PN +Y L
Sbjct: 538 EEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTIL 597
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ G C G A F M G + +YS +I+ KN + + A+ ++ + L G+
Sbjct: 598 IKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGV 657
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID--GLCKNSYIVEA 374
PDV +YN+L + +E+A +L+DEM +G+ + Y T I+ G CK+ + EA
Sbjct: 658 VPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEA 717
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+LF + D Y LIDG
Sbjct: 718 FKLFDEMISKGISPDGYIYCILIDG 742
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 200/437 (45%), Gaps = 55/437 (12%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNST----GLFPDLYTYNILINCFCKMGRVS 69
P +C N++ L N ++ LF ++ + + PD+YTY +I CK+G V
Sbjct: 205 PTLICCNNLMRDLLKAN-----MMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVI 259
Query: 70 HGFVVLGRILRSC----FT------------------------------PNAVTFTSLIK 95
G +VL + + C FT P+ T+T L+
Sbjct: 260 KGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVD 319
Query: 96 GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN--- 152
G C + R EA +F + G PN FTY LI+G + G+ AL + +EM +
Sbjct: 320 GFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKL 379
Query: 153 ---------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
G G + KA LF +M I PD TY +I G+ ++D +A LL
Sbjct: 380 NVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELL 439
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
EM + + P+ T++V++ LC + + +A+ +LD MI+ GV+PN F+Y TL+ +
Sbjct: 440 AEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQE 499
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
R A EL M + G +F Y+ LI G C+ K++E A L +M KGIKP+ Y
Sbjct: 500 SRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTY 559
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
+ + +++ A + F +M G+ + Y I G C VEA+ F+ +
Sbjct: 560 GAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLE 619
Query: 384 LKCELDIRAYNCLIDGL 400
DIRAY+ +I L
Sbjct: 620 KGLIPDIRAYSAIIHSL 636
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 184/394 (46%), Gaps = 26/394 (6%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P ++++L L + + ++ G+ P+++ Y LI + + R
Sbjct: 442 MKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESR 501
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+L ++ + P+ + LI GLC ++ EA L + G +PN TY
Sbjct: 502 YEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGA 561
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
IN ++G VA F++M S I P+ V YT +I
Sbjct: 562 FINLYSKSGEIQVAERYFKDMLSS-----------------------GIVPNNVIYTILI 598
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
+G C + EA M+++G+ P++ ++ I+ L KNGK EA + ++ GV
Sbjct: 599 KGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVV 658
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN--GYCKNKEIEGAL 305
P+ F+YN+L+ GFC G + +A +L+ M G + Y+ LIN GYCK+ + A
Sbjct: 659 PDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAF 718
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
L+ EM+SKGI PD IY L + +E+A LF E Q+ V + + + + ID
Sbjct: 719 KLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS-AFNSLIDSF 777
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
CK+ ++EA ELF + K +I Y LID
Sbjct: 778 CKHGKVIEARELFDDMVDKKLTPNIVTYTILIDA 811
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 184/349 (52%), Gaps = 13/349 (3%)
Query: 38 SLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 97
S+F S G FP L N L+ K + + V G ++ + P+ T+T++IK
Sbjct: 193 SVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAH 252
Query: 98 CAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE-EMASGNGEFG 156
C +++ + +++ C+PN+FTYN I GL +TG AL + + M G G G
Sbjct: 253 CKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDG 311
Query: 157 ------VEGFVDK-----AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
V+GF + AK +F M +NP+ TYT++I GF + EA + E
Sbjct: 312 HTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDE 371
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M+ +G++ NVVT+N ++ + K G+M +A L + M+ G+ P+ + YN L+DG+ +
Sbjct: 372 MITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHD 431
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
+ +A EL M++ T + F+YS+LI+G C + +++ A + +M+ G+KP+V +Y T
Sbjct: 432 MAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGT 491
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
L + + E A +L M +GV D + Y I GLC+ + EA
Sbjct: 492 LIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEA 540
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 188/431 (43%), Gaps = 48/431 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + L + Y+ + L K + + G+ PDL+ YN LI C+ +V ++
Sbjct: 484 PNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKML 543
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + PNA T+ + I I A F + G PN Y LI G
Sbjct: 544 LVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCD 603
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G+T+ AL+ F+ M G +A +FL+ + PDV
Sbjct: 604 VGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFL 663
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL--CKNGKMDEASRLLDL 240
Y S+I GFC D +A L EM+ G+ PN+V +N ++++ CK+G + EA +L D
Sbjct: 664 YNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDE 723
Query: 241 MIQIGVRPNAFVY----------------------------------NTLMDGFCLTGRV 266
MI G+ P+ ++Y N+L+D FC G+V
Sbjct: 724 MISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKV 783
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
A+ELF M T + +Y+ILI+ Y K + +E A L+ +M ++ I P+ + Y +L
Sbjct: 784 IEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSL 843
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
+ +I + LF +M+ G+A D Y CK +EA++L +
Sbjct: 844 LLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGI 903
Query: 387 ELDIRAYNCLI 397
+L+ ++ LI
Sbjct: 904 KLEDDVFDALI 914
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/355 (31%), Positives = 178/355 (50%), Gaps = 19/355 (5%)
Query: 52 LYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC----AESRIMEAA 107
L++Y+IL C G + +L ++L++ P + SL++ C S +
Sbjct: 120 LHSYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEI-LDSLVR--CYREFGGSNLTVFD 176
Query: 108 ALFTKLRVFG--CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAK 165
K RV G E + ++ G + T I NL ++ N + G K
Sbjct: 177 IFIDKFRVLGFLNEASSVFIASISEGFFPT--LICCNNLMRDLLKAN----MMGLFWK-- 228
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
++ M + I PDV TYT+VI+ C D + K +L EM ++ +PN+ T+N + L
Sbjct: 229 -VYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGL 286
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
C+ G +DEA + LM++ G+ P+ Y L+DGFC R AK +F SM S G
Sbjct: 287 CQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNR 346
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
F+Y+ LI+G+ K IE AL + EM+++G+K +VV YN + + + ++ +A LF+E
Sbjct: 347 FTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNE 406
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
M G+ DTWTY IDG K+ + +A EL ++ K Y+ LI GL
Sbjct: 407 MLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGL 461
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 186/383 (48%), Gaps = 21/383 (5%)
Query: 21 NILFGCLAKNKHYDT-----VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVL 75
N+++ L K H D LS FK + GL PD+ Y+ +I+ K G+ V
Sbjct: 591 NVIYTILIKG-HCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF 649
Query: 76 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN--GLY 133
+ L++ P+ + SLI G C E I +A+ L+ ++ G PN+ YNTLIN G
Sbjct: 650 LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYC 709
Query: 134 RTGHTIVALNLFEEMASG----NGEF--------GVEGFVDKAKELFLQMKDENINPDVV 181
++G+ A LF+EM S +G G EG ++KA LF + + +++ +
Sbjct: 710 KSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLS 768
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+ S+I FC EA+ L +M+D+ + PN+VT+ +++D K M+EA +L M
Sbjct: 769 AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDM 828
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ PN Y +L+ + G + LF ME+ G +Y ++ + YCK +
Sbjct: 829 ETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKS 888
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
AL L + L +GIK + +++ L L + Q+ +L EM ++ ++ + T T
Sbjct: 889 LEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTL 948
Query: 362 IDGLCKNSYIVEAVELFRTLRIL 384
+ G K+ EA ++ ++ L
Sbjct: 949 LLGFYKSGNEDEASKVLGVMQRL 971
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 151/352 (42%), Gaps = 48/352 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +++ + L+KN + +F + TG+ PD++ YN LI+ FCK G + +
Sbjct: 624 PDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQL 683
Query: 75 LGRILRSCFTPNAVTFTSLIK--GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+L + PN V + +LI G C + EA LF ++ G P+ + Y LI+G
Sbjct: 684 YDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGC 743
Query: 133 YRTGHTIVALNLFEEMASGN---------------------------------------- 152
+ G+ AL+LF E +
Sbjct: 744 GKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIV 803
Query: 153 ------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
+G +++A++LFL M+ NI P+ +TYTS++ + + + L +M
Sbjct: 804 TYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDM 863
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+G+ + + + V+ CK GK EA +LL+ + G++ V++ L+ C ++
Sbjct: 864 EARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQI 923
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
+ EL M + + + + L+ G+ K+ + A + G M G P
Sbjct: 924 STVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVP 975
>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
Length = 844
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/472 (27%), Positives = 220/472 (46%), Gaps = 87/472 (18%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + N + L K K D S+ +++ +G+ PDL+TY+++I+ CK + V
Sbjct: 243 PKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERV 302
Query: 75 LGRILRSCFTPNAVTFTSLIKG-----------------------------------LCA 99
L +++ + PN++T+ SLI G L
Sbjct: 303 LEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFK 362
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG--------HTIVALNLFEEMASG 151
R EA +F + + G +P++ +Y+T+++G Y T H I L L + +A
Sbjct: 363 HGRTNEAKCIFDSMVLKGPKPDIISYSTMLHG-YATATDSCLADVHNIFNLMLTKGIAPN 421
Query: 152 NGEFGVE-------GFVDKAKELFLQMKDENINPDVVTYTSVI----------------- 187
F + G +DKA +F M+++ + PD VT+ +VI
Sbjct: 422 KHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFN 481
Query: 188 ------------------RGFCYANDWNEAKCLLIEMMDQGVQP-NVVTFNVIMDELCKN 228
+G C + +AK L+ EMM++ + P V F+ I++ LCK
Sbjct: 482 HMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKE 541
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G++ E ++D+M+Q G RPN +N+LM+G+CL G + A L +M S+G + Y
Sbjct: 542 GRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIY 601
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
L++GYCKN I+ AL+++ +ML KG+KP V+Y+ + LF+ + A K+F EM
Sbjct: 602 GTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIE 661
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G TY + GLC+N+ EA L L + + DI +N +I +
Sbjct: 662 SGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 713
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 194/410 (47%), Gaps = 14/410 (3%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFG-CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
CIFD M+ P P + +L G A + V ++F + + G+ P+ + +NILIN
Sbjct: 371 CIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILIN 430
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+ + G + ++ + P+ VTF ++I LC R+ +A F + G P
Sbjct: 431 AYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPP 490
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGN-GEFGV------------EGFVDKAKEL 167
+ Y LI G G + A L EM + + GV EG V + K++
Sbjct: 491 SEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDI 550
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
M P+VVT+ S++ G+C + EA LL M G++PN + ++D CK
Sbjct: 551 MDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCK 610
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
NG++D+A + M+ GV+P + +Y+ ++ G R AK++F M G T ++ +
Sbjct: 611 NGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHT 670
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y +++ G C+N + A L ++ + +K D++ +N + +F++ + + A +LFD +
Sbjct: 671 YGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAIS 730
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
G+ + TY I L K EA LF ++ D R N ++
Sbjct: 731 TYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 780
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 199/455 (43%), Gaps = 84/455 (18%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTY--------------- 55
R SPP + ++NIL C + D L++ RL GL PD ++Y
Sbjct: 170 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKA 229
Query: 56 -------------------NILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 96
N +I CKM + ++ +++ S P+ T++ +I G
Sbjct: 230 HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 289
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG 156
LC + +A + ++ G PN TYN+LI+G +G ++ +F++M+S
Sbjct: 290 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 349
Query: 157 VE------------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND--------- 195
V+ G ++AK +F M + PD+++Y++++ G+ A D
Sbjct: 350 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNI 409
Query: 196 ----------------------------WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
++A + +M ++G+ P+ VTF ++ LC+
Sbjct: 410 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 469
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
G++D+A + M+ IGV P+ VY L+ G C G + +AKEL M +
Sbjct: 470 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK 529
Query: 288 Y-SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
Y S +IN CK + + M+ G +P+VV +N+L + +E AF L D M
Sbjct: 530 YFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAM 589
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
G+ + + Y T +DG CKN I +A+ +FR +
Sbjct: 590 ASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDM 624
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 191/400 (47%), Gaps = 37/400 (9%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDT-------VLSLFKRLNSTGLF----PDLYTYNILINC 61
+P P + N + LA+ + LFKR++ P ++TYNILI+C
Sbjct: 126 APVPARALNGILAALARAPPSAACGDAPALAIELFKRMDRWACPRHSPPTIHTYNILIDC 185
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
+ ++ R G ++GR+L++ P+ ++ SLI G + + +A LF ++ G P
Sbjct: 186 YRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPK 244
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
+ N++I L + +EM DKA+ + +M D I PD+
Sbjct: 245 ILICNSIIKELCK----------MKEM-------------DKAESIVQKMVDSGIAPDLF 281
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY+ +I G C + ++A+ +L +M++ G +PN +T+N ++ +G +E+ R+ M
Sbjct: 282 TYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM 341
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE- 300
GV P N+ + GR N AK +F SM G + SYS +++GY +
Sbjct: 342 SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDS 401
Query: 301 -IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
+ +++ ML+KGI P+ ++N L +++A +F++MQ G+ DT T+
Sbjct: 402 CLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFA 461
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
T I LC+ + +A+ F + + Y CLI G
Sbjct: 462 TVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQG 501
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 155/336 (46%), Gaps = 23/336 (6%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F++M+++ P ++ GC + + + +N P + ++ +IN C
Sbjct: 480 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC 539
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K GRV+ G ++ ++++ PN VTF SL++G C + EA AL + G EPN +
Sbjct: 540 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCY 599
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
Y TL++G + G +D A +F M + + P V Y
Sbjct: 600 IYGTLVDGYCKNGR-----------------------IDDALTVFRDMLHKGVKPTSVLY 636
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
+ ++ G A AK + EM++ G ++ T+ V++ LC+N DEA+ LL+ +
Sbjct: 637 SIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFA 696
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
+ V+ + +N ++ GR AKELF ++ + G + +YS++I K + E
Sbjct: 697 MNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEE 756
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
A +L+ + G D + N + +L +V +A
Sbjct: 757 ADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKA 792
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 113/265 (42%), Gaps = 16/265 (6%)
Query: 15 PPVCSFNILFG--CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
P V +FN L CL N + +L + S G+ P+ Y Y L++ +CK GR+
Sbjct: 561 PNVVTFNSLMEGYCLVGN--MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDAL 618
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
V +L P +V ++ ++ GL R A +F ++ G ++ TY ++ GL
Sbjct: 619 TVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGL 678
Query: 133 YRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDV 180
R T A L E++ + N +F + G +AKELF + + P++
Sbjct: 679 CRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNI 738
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
TY+ +I + EA L I + G + N I+ L ++ +AS L +
Sbjct: 739 QTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSI 798
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGR 265
+ + + A + L F G+
Sbjct: 799 IGENNLTLEASTISLLASLFSREGK 823
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/393 (31%), Positives = 194/393 (49%), Gaps = 12/393 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +N L + D L + +R+ + G+ P++ TY LI +CK + F +
Sbjct: 222 VVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYE 281
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++RS P+ VT ++L+ GLC + + EA ALF ++ G PN TY TLI+ L +
Sbjct: 282 GMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKAR 341
Query: 137 HTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
+L L EM S G EG +++AK++ + +NI P+ VTYT
Sbjct: 342 RGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYT 401
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
++ C A + + A+ +L++M ++ V PNVVTF+ I++ L K G + +A+ + M
Sbjct: 402 VLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDS 461
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G+ PN Y TL+DGF A +++ M G F L+NG KN IEGA
Sbjct: 462 GIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGA 521
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
+L+ +M +G+ D V Y TL LF+ + AFK+ E+ ++ D Y FI+
Sbjct: 522 EALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINC 581
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
LC EA + +R E D YN +I
Sbjct: 582 LCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMI 614
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 190/428 (44%), Gaps = 47/428 (10%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+ L L K + + + S + P+ TY +L++ C+ G + VL ++
Sbjct: 365 YTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQME 424
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
PN VTF+S+I GL + +AA K++ G PNV TY TLI+G ++
Sbjct: 425 EKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQE 484
Query: 140 VALNLFEEMASGNGE---FGVE---------GFVDKAKELFLQMKD-------------- 173
AL+++ +M E F V+ G ++ A+ LF M +
Sbjct: 485 AALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLM 544
Query: 174 ---------------------ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
+N++PD V Y I C ++EAK L EM + G++
Sbjct: 545 DGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLE 604
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
P+ T+N ++ C+ GK +A +LL M + ++PN Y TL+ G G V +AK L
Sbjct: 605 PDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFL 664
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
M S G T ++ ++ ++ + L ++ M+ G+ D+ +YNTL VL
Sbjct: 665 LNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCC 724
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
A + DEM G+A DT T+ I G CK+S++ A ++ + +I
Sbjct: 725 HGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIAT 784
Query: 393 YNCLIDGL 400
+N L+ GL
Sbjct: 785 FNTLLGGL 792
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 169/380 (44%), Gaps = 16/380 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ L L K + + + L L PD YN+ INC C +G+ S L +
Sbjct: 539 NYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEM 598
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ P+ T+ ++I C E + +A L +++ +PN+ TY TL+ GL G
Sbjct: 599 RNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVV 658
Query: 139 IVALNLFEEMASGNGEFGVEGFV--------------DKAKELFLQMKDENINPDVVTYT 184
A L EMAS F D E+ M ++ D+ Y
Sbjct: 659 KKAKFLLNEMASAG--FAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYN 716
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+++ C A +L EM+ +G+ P+ +TFN ++ CK+ +D A + M+
Sbjct: 717 TLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQ 776
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G+ PN +NTL+ G GR+ A + M+ +G +Y IL+ GY K A
Sbjct: 777 GLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEA 836
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L LY EM+SKG P YN+L + + +A +LF EM+R GV + TY ++G
Sbjct: 837 LRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNG 896
Query: 365 LCKNSYIVEAVELFRTLRIL 384
K +E L + ++ L
Sbjct: 897 WSKLRNGIEVRILLKDMKEL 916
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 166/356 (46%), Gaps = 23/356 (6%)
Query: 23 LFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSC 82
L L KN + + +LFK ++ GL D Y L++ K G + F V ++
Sbjct: 508 LVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKN 567
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
+P+AV + I LC + EA + ++R G EP+ TYNT+I R G T AL
Sbjct: 568 LSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKAL 627
Query: 143 NLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
L +EM K +I P+++TYT+++ G A +AK L
Sbjct: 628 KLLKEM-----------------------KRNSIKPNLITYTTLVVGLLEAGVVKKAKFL 664
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
L EM G P +T ++ + + D + +LM+ G+ + VYNTL+ C
Sbjct: 665 LNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCC 724
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G A + M + G +++ LI G+CK+ ++ A ++Y +ML +G+ P++
Sbjct: 725 HGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIAT 784
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
+NTL L ++ A + +M++ G+ + TY + G K S VEA+ L+
Sbjct: 785 FNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLY 840
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 177/396 (44%), Gaps = 29/396 (7%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG----LFPDLYTYNILINCFCKMG 66
RP P + N + + LSL + + + D +YNI + + G
Sbjct: 70 RPVPGDTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQG 129
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEP-NVFT 124
VL + + + + VT ++ + GLC + EAAAL L R G + +V
Sbjct: 130 HGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVG 189
Query: 125 YNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
+N LI+G + AL + E M + + + DVV Y
Sbjct: 190 WNALIDGYCKVQDMAAALAVVERMTT-----------------------QGVALDVVGYN 226
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
S++ GF ++ D + A ++ M GV+PNVVT+ ++ E CK MDEA L + M++
Sbjct: 227 SLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRS 286
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
GV P+ + L+DG C G+ + A LF M+ +G +Y LI+ K + +
Sbjct: 287 GVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSES 346
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L L GEM+S+G+ D+V+Y L L + ++E A + Q D + + TY +D
Sbjct: 347 LGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDA 406
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
C+ I A ++ + ++ ++ +I+GL
Sbjct: 407 HCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGL 442
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 151/351 (43%), Gaps = 47/351 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +N+ CL + S K + +TGL PD TYN +I C+ G+ S +
Sbjct: 570 PDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKL 629
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + R+ PN +T+T+L+ GL + +A L ++ G P T+ ++
Sbjct: 630 LKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSG 689
Query: 135 TGHTIVALNLFEEM--ASGNGEFGV----------EGFVDKAKELFLQMKDENINPDVVT 182
+ V L + E M A + + V G A + +M I PD +T
Sbjct: 690 SRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTIT 749
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ ++I G C ++ + A + +M+ QG+ PN+ TFN ++ L G++ EA +L M
Sbjct: 750 FNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMK 809
Query: 243 QIGVRPN-----------------------------------AFVYNTLMDGFCLTGRVN 267
++G+ PN A YN+LM F G +N
Sbjct: 810 KVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMN 869
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
+AKELF M+ G HT +Y IL+NG+ K + L +M G KP
Sbjct: 870 QAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKP 920
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 12/212 (5%)
Query: 45 STGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 104
+ G+ PD T+N LI CK + + F + ++L +PN TF +L+ GL + RI
Sbjct: 740 TRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIG 799
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------ 152
EA + + ++ G EPN TY+ L+ G + + + AL L+ EM S
Sbjct: 800 EADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLM 859
Query: 153 GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
+F G +++AKELF +MK + TY ++ G+ + E + LL +M + G +
Sbjct: 860 SDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFK 919
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
P+ T + + + G EA RLL + ++
Sbjct: 920 PSKGTISSMSRAFSRPGMTGEARRLLKTLFKV 951
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 13/276 (4%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
+P + +L C + ++ D +L + + + GL D+ YN L++ C G +
Sbjct: 674 APTSLTHQRVLQAC-SGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNAT 732
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
VVL +L P+ +TF +LI G C S + A A++ ++ G PN+ T+NTL+ GL
Sbjct: 733 VVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGL 792
Query: 133 YRTGHTIVALNLFEEMASGNGEFG-------VEGFVDKAKE-----LFLQMKDENINPDV 180
G A + +M E V G+ K+ + L+ +M + P
Sbjct: 793 ESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKA 852
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
TY S++ F A N+AK L EM +GV T++++++ K E LL
Sbjct: 853 STYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKD 912
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
M ++G +P+ +++ F G A+ L ++
Sbjct: 913 MKELGFKPSKGTISSMSRAFSRPGMTGEARRLLKTL 948
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 189/386 (48%), Gaps = 28/386 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N L L + + L+ + GL P+++TYNIL+ CK RV +
Sbjct: 142 PTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKL 201
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ P+AVT+T+++ LC +I +A L + + P+V YN LI+G+ +
Sbjct: 202 FVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PSVPVYNALIDGMCK 256
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G VA+ L EM D ++P+VV+Y+ +I C +
Sbjct: 257 EGRIEVAIKLLGEMM-----------------------DNGVDPNVVSYSCIINSLCVSG 293
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ A L +M +G N+ TF ++ GK+ EA L LMIQ G PN YN
Sbjct: 294 NVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYN 353
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+ G C G + A ++ M+ GC V +YSILI+G+ K+ ++ GA + M+S
Sbjct: 354 TLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISH 413
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G +P+VV Y + VL + ++A L ++M +G +T T+ TFI GLC N + A
Sbjct: 414 GCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWA 473
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
++L ++ C +I YN L+D L
Sbjct: 474 MKLLERMQGHGCLPNITTYNELLDAL 499
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 185/395 (46%), Gaps = 17/395 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++NIL L KN D LF +++ G PD TY +++ CK G++ +
Sbjct: 177 PNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL 236
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
GR F P+ + +LI G+C E RI A L ++ G +PNV +Y+ +IN L
Sbjct: 237 AGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCV 291
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMK------------DENINPDVVT 182
+G+ +A LF +M + + F K F++ K + P+VV
Sbjct: 292 SGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVA 351
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G C EA + +M G PNV T+++++D K+G + AS + MI
Sbjct: 352 YNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMI 411
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G RPN Y ++D C ++A L M GCT +++ I G C N +E
Sbjct: 412 SHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVE 471
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ L M G P++ YN L LF +++ E AF LF E++ + + TY T +
Sbjct: 472 WAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVL 531
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
G + + EA++LF + D YN +I
Sbjct: 532 YGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMI 566
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 157/337 (46%), Gaps = 24/337 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L N + L + ++ +G P++ TY+ILI+ F K G +
Sbjct: 347 PNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASET 406
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R++ PN VT+T ++ LC S +A +L K+ + GC PN T+NT I GL
Sbjct: 407 WNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCG 466
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G A+ L E M G+G P++ TY ++ N
Sbjct: 467 NGRVEWAMKLLERM-QGHGCL----------------------PNITTYNELLDALFRMN 503
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ EA L E+ + +QPN+VT+N ++ + G M EA +L + G P++ YN
Sbjct: 504 KYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYN 563
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHT-VFSYSILINGYCKNKEIEGALSLYGEMLS 313
T++ +C G+V A +L + SM H + +Y+ LI G C IE A++ + ++
Sbjct: 564 TMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAIN 623
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+GI P+ +N L F+ + D++ R G
Sbjct: 624 QGICPNFATWNALVRCFFDSLGHMGPIHILDDILRKG 660
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 125/277 (45%), Gaps = 30/277 (10%)
Query: 154 EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
G E +D + + QMK + IN + +I G+ +A + + + G +P
Sbjct: 83 RLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKP 142
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
V +N ++D L K + L M + G+ PN F YN L+ C RV+ A +LF
Sbjct: 143 TVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLF 202
Query: 274 VSMESMGC-----THT-------------------------VFSYSILINGYCKNKEIEG 303
V M + GC T+T V Y+ LI+G CK IE
Sbjct: 203 VEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEV 262
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A+ L GEM+ G+ P+VV Y+ + L VE AF LF +M G A+ T+ I
Sbjct: 263 AIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIK 322
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G + EA++L++ + CE ++ AYN LI GL
Sbjct: 323 GCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGL 359
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 102/219 (46%), Gaps = 5/219 (2%)
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY +I + + + +L +M G+ F I++ + G ++A ++ +
Sbjct: 76 TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G +P +YN L+D + L+ +M+ G VF+Y+IL+ CKN +
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A L+ EM +KG PD V Y T+ L + +++ A +L + Y
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PSVPVYNAL 250
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
IDG+CK I A++L + + ++ +Y+C+I+ L
Sbjct: 251 IDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSL 289
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 87/189 (46%), Gaps = 5/189 (2%)
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
Q T+ V+++ L + +MD +L M G+ ++ +++G+ G +A +
Sbjct: 71 QHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALK 130
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
+F + GC TV Y+ L++ + + LY M G+ P+V YN L L
Sbjct: 131 MFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALC 190
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIR 391
+ +V+ A KLF EM G D TY T + LCK I +A EL + +
Sbjct: 191 KNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKP-----SVP 245
Query: 392 AYNCLIDGL 400
YN LIDG+
Sbjct: 246 VYNALIDGM 254
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/404 (31%), Positives = 196/404 (48%), Gaps = 12/404 (2%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ +R P V S++ + + VL L + + GL P+ YTYN +I CK G+
Sbjct: 279 MELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGK 338
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V+ VL ++ P+ V +T+LI G C + A LF +++ P+ TY
Sbjct: 339 VAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTA 398
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDEN 175
+I GL +TG + A LF EM E + EG + +A L QM
Sbjct: 399 VICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMG 458
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+ P++VTYT++ G C + + A LL EM +G++ N+ T+N +++ LCK G +D+A
Sbjct: 459 LTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAV 518
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+L+ M G P+A Y TLMD +C + + RA EL M TV ++++L+NG+
Sbjct: 519 KLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGF 578
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
C + +E L ML KGI P+ YN+L + + +++ M GV D
Sbjct: 579 CMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDG 638
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
TY I G CK + EA L R + L + +YN LI G
Sbjct: 639 NTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKG 682
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 182/361 (50%), Gaps = 12/361 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + L K + + LF + + PD TY +I C+ GRV +
Sbjct: 356 PDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKL 415
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ P+ VT+T+LI G C E ++ EA +L ++ G PN+ TY L +GL +
Sbjct: 416 FHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCK 475
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G A L EM E + G +D+A +L M+ +PD VT
Sbjct: 476 CGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVT 535
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+++ +C + + A LL +M+D+ +QP VVTFNV+M+ C +G +++ +LL M+
Sbjct: 536 YTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWML 595
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ PNA YN+L+ +C+ + E++ M + G +Y+ILI G+CK + ++
Sbjct: 596 EKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMK 655
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ +M+ KG V YN L ++ + A +LF++M+R+G+ AD Y F
Sbjct: 656 EAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFA 715
Query: 363 D 363
D
Sbjct: 716 D 716
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 192/393 (48%), Gaps = 12/393 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S+NI+ L + L ++ G PD+ +Y+ +IN +C++G + ++ +
Sbjct: 255 SYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEM 314
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PN T+ +I LC ++ EA + ++ G P+ Y TLI+G + G+
Sbjct: 315 QIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNV 374
Query: 139 IVALNLFEEMASG--NGEFGV----------EGFVDKAKELFLQMKDENINPDVVTYTSV 186
A LF+EM + +F G V +A +LF +M + + PD VTYT++
Sbjct: 375 SSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTAL 434
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G+C EA L +M+ G+ PN+VT+ + D LCK G++D A+ LL M + G+
Sbjct: 435 IDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGL 494
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
N + YN+L++G C G +++A +L ME G +Y+ L++ YCK++E+ A
Sbjct: 495 ELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHE 554
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L +ML + ++P VV +N L +E KL M G+ + TY + I C
Sbjct: 555 LLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYC 614
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + E++R + D YN LI G
Sbjct: 615 IRNNMRATTEIYRGMCAKGVVPDGNTYNILIKG 647
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 188/402 (46%), Gaps = 17/402 (4%)
Query: 10 MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS 69
++P+P ++N + L K + + + S G+ PD Y LI+ FCK+G VS
Sbjct: 319 LKPNP---YTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVS 375
Query: 70 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
+ + + + +P+ +T+T++I GLC R+MEA LF ++ EP+ TY LI
Sbjct: 376 SAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALI 435
Query: 130 NGLYRTGHTIVALNLFEEM-------------ASGNGEFGVEGFVDKAKELFLQMKDENI 176
+G + G A +L +M A +G G VD A EL +M + +
Sbjct: 436 DGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKC-GEVDTANELLHEMCRKGL 494
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
++ TY S++ G C A + ++A L+ +M G P+ VT+ +MD CK+ +M A
Sbjct: 495 ELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHE 554
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
LL M+ ++P +N LM+GFC++G + ++L M G +Y+ LI YC
Sbjct: 555 LLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYC 614
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
+ +Y M +KG+ PD YN L + ++ A+ L +M G
Sbjct: 615 IRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVS 674
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
+Y I G K +EA ELF +R D YN D
Sbjct: 675 SYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFAD 716
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 183/365 (50%), Gaps = 25/365 (6%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI-LRSCFTPNAVTFTSLI 94
L +F G+ + +YNI+ + C++GRV +L ++ LR C P+ ++++++I
Sbjct: 237 ALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCI-PDVISYSTVI 295
Query: 95 KGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE 154
G C + L ++++ G +PN +TYN +I L +TG A + EM S
Sbjct: 296 NGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMIS---- 351
Query: 155 FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
E I PD V YT++I GFC + + A L EM + + P+
Sbjct: 352 -------------------EGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPD 392
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
+T+ ++ LC+ G++ EA +L M+ + P+ Y L+DG+C G++ A L
Sbjct: 393 FITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHN 452
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
M MG T + +Y+ L +G CK E++ A L EM KG++ ++ YN+L L +
Sbjct: 453 QMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAG 512
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
+++A KL +M+ G D TY T +D CK+ +V A EL R + + + + +N
Sbjct: 513 NIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFN 572
Query: 395 CLIDG 399
L++G
Sbjct: 573 VLMNG 577
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 172/370 (46%), Gaps = 13/370 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M + SP + ++ G L + LF + L PD TY LI+ +
Sbjct: 380 LFDEMQKRKISPDFITYTAVICG-LCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGY 438
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G++ F + ++L+ TPN VT+T+L GLC + A L ++ G E N+
Sbjct: 439 CKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNI 498
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVD------------KAKELFLQ 170
+TYN+L+NGL + G+ A+ L ++M + +A EL Q
Sbjct: 499 YTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQ 558
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M D + P VVT+ ++ GFC + + + LL M+++G+ PN T+N ++ + C
Sbjct: 559 MLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNN 618
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
M + + M GV P+ YN L+ G C + A L M G TV SY+
Sbjct: 619 MRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNA 678
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI G+ K K+ A L+ +M +G+ D IYN + ++ ++E +L DE
Sbjct: 679 LIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKC 738
Query: 351 VAADTWTYRT 360
+ D T T
Sbjct: 739 LVGDIQTKNT 748
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 104/313 (33%), Positives = 159/313 (50%), Gaps = 21/313 (6%)
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI-VALNLFEEMASGNGEFGV------ 157
EA LF K+ +G +V + N I+ L I +AL +F E E GV
Sbjct: 200 EARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFP----EVGVCWNTAS 255
Query: 158 ----------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
G V +A +L LQM+ PDV++Y++VI G+C + L+ EM
Sbjct: 256 YNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQ 315
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+G++PN T+N ++ LCK GK+ EA R+L MI G+ P+ +Y TL+DGFC G V+
Sbjct: 316 IKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVS 375
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A LF M+ + +Y+ +I G C+ + A L+ EM+ K ++PD V Y L
Sbjct: 376 SAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALI 435
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
+ +++ AF L ++M + G+ + TY DGLCK + A EL + E
Sbjct: 436 DGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLE 495
Query: 388 LDIRAYNCLIDGL 400
L+I YN L++GL
Sbjct: 496 LNIYTYNSLVNGL 508
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 216/409 (52%), Gaps = 23/409 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD ML R P V +FN + L + +L ++ G+ + +T NI I
Sbjct: 198 LFDEMLG-RDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGL 256
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ GR+ ++ R + + P+ VT+ +L++GLC +S++ EAA ++ GC P+
Sbjct: 257 CEDGRLEEAVALVER-MGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDD 315
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFL 169
FTYNT+I+G ++G A L ++ NG EG +++A ELF
Sbjct: 316 FTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLING-LCAEGDIERALELFN 374
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+ + +++ PD+V Y S+++G C A ++ EM+++G P++ T+N+I++ LCK G
Sbjct: 375 EAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMG 434
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+ +A+ +++ I G P+ F +NTL+DG+C +++ A +L M + G V +Y+
Sbjct: 435 NISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYN 494
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
++NG CK + + + EM+ KG +P+ + YN L +I+Q+E A + M +D
Sbjct: 495 SVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQD 554
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
G+ D ++ T I G C+N + A LF+ +LD + Y+ D
Sbjct: 555 GLVPDAVSFNTLIHGFCRNGDLDGAYLLFQ-------KLDEKGYSATAD 596
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 196/414 (47%), Gaps = 47/414 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L K+ R+ + G PD +TYN +I+ +CK G + +
Sbjct: 278 PDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATEL 337
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + F P+ VT+ SLI GLCAE I A LF + + +P++ YN+L+ GL R
Sbjct: 338 LKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCR 397
Query: 135 TGHTIVALNLFEEMAS--------------------GN--------GEFGVEGFV----- 161
G + AL + EM GN + V+G++
Sbjct: 398 QGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFT 457
Query: 162 --------------DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
D A +L +M I PDV+TY SV+ G C A E EM+
Sbjct: 458 FNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMI 517
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+G +PN +T+N++++ CK +++EAS ++ M Q G+ P+A +NTL+ GFC G ++
Sbjct: 518 LKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLD 577
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A LF ++ G + T +++ILI Y ++ A ++GEM+SKG KPD+ Y L
Sbjct: 578 GAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILV 637
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
L + V+RA+ EM G T+ ++ L N + EAV + +
Sbjct: 638 DGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIM 691
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 179/384 (46%), Gaps = 13/384 (3%)
Query: 28 AKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNA 87
A+ + F+R++ P YN +++ V R+L + P+A
Sbjct: 82 ARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDA 141
Query: 88 VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
T T +K C R A L L GC+ Y T++ GLY GH A +LF+E
Sbjct: 142 RTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDE 201
Query: 148 M---------ASGNGEFGV---EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M A+ N +G V ++ L ++ ++ + T IRG C
Sbjct: 202 MLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGR 261
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
EA L+E M V P+VVT+N +M LCK+ K+ EA++ L M+ G P+ F YNT
Sbjct: 262 LEEA-VALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNT 320
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
++DG+C +G + A EL G +Y LING C +IE AL L+ E +K
Sbjct: 321 IIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKD 380
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+KPD+V+YN+L L + A ++ +EM +G D WTY I+GLCK I +A
Sbjct: 381 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAA 440
Query: 376 ELFRTLRILKCELDIRAYNCLIDG 399
+ + D+ +N LIDG
Sbjct: 441 VVMNDAIVKGYLPDVFTFNTLIDG 464
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 184/423 (43%), Gaps = 61/423 (14%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR------ 67
PP ++N + L ++D ++ R+ + G+ PD T+ + + FC GR
Sbjct: 103 PPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALR 162
Query: 68 ------------------------VSHGFVVLGRIL------RSCFTPNAVTFTSLIKGL 97
+HG R L R F P+ TF +++ L
Sbjct: 163 LLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVF-PDVATFNNVLHAL 221
Query: 98 CAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV 157
C + +ME+ AL K+ G N FT N I GL G A+ L E M +
Sbjct: 222 CQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGA------- 274
Query: 158 EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
+ PDVVTY +++RG C + EA L MM+QG P+ T
Sbjct: 275 -----------------YVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFT 317
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
+N I+D CK+G + EA+ LL + G P+ Y +L++G C G + RA ELF +
Sbjct: 318 YNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQ 377
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
+ + Y+ L+ G C+ I AL + EM+ +G PD+ YN + L ++ +
Sbjct: 378 AKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNIS 437
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
A + ++ G D +T+ T IDG CK + A++L + D+ YN ++
Sbjct: 438 DAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVL 497
Query: 398 DGL 400
+GL
Sbjct: 498 NGL 500
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 160/393 (40%), Gaps = 35/393 (8%)
Query: 10 MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS 69
M P PP+ + + + + H + L + P Y LI GR+
Sbjct: 1 MPPRSPPLAAAADVASVVTRCPHAEPSSEL-----TASTIP---AYRALIRELVSAGRLD 52
Query: 70 HGFVVLGRILRSCFTPNAVT--FTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
L RS P+++ + + I+ R+ A F ++ +F C P YN
Sbjct: 53 DVDAALASA-RSHLAPDSLQPLYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNA 111
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
+++ L + D+A +++++M + PD T+T +
Sbjct: 112 IMDALVNAA-----------------------YHDQAHKVYVRMLAAGVAPDARTHTVRL 148
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
+ FC + A LL + ++G + ++ L +G A L D M+ V
Sbjct: 149 KSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVF 208
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P+ +N ++ C G V + L + G + F+ +I I G C++ +E A++L
Sbjct: 209 PDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVAL 268
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
E + + PDVV YNTL L + +V+ A + M G D +TY T IDG CK
Sbjct: 269 V-ERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCK 327
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + EA EL + D Y LI+GL
Sbjct: 328 SGMLQEATELLKDAVFKGFVPDRVTYCSLINGL 360
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 194/385 (50%), Gaps = 24/385 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FN L L K+ ++ +F + D+Y++ I+I C++G + GF V
Sbjct: 115 PGSNTFNNLLILLIKSNFFEKAWRVFNETKGN-VKLDVYSFGIMIKGCCEVGYLDKGFEV 173
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
LG++ +PN V +T+LI G C I LF K+ N +TY LING ++
Sbjct: 174 LGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFK 233
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G + L+E +MK I P+V TY S+I C
Sbjct: 234 MGLKKDGIELYE-----------------------KMKLTGIVPNVYTYNSMICRCCNDG 270
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
N A L EM ++GV NVVT+N ++ LC+ ++ EA RL+ M + G+ PN YN
Sbjct: 271 KLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYN 330
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+DG+C G +++A LF M+S G + ++ +Y+ILI G+ + K G + EM ++
Sbjct: 331 TLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEAR 390
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+ P V Y L L +E+AF+++ M++ G+ AD + Y I GLC + EA
Sbjct: 391 GLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEA 450
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+LF++L + + + YN +I G
Sbjct: 451 SKLFKSLDEMHLKPNDVIYNTMIYG 475
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 160/315 (50%), Gaps = 23/315 (7%)
Query: 37 LSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 96
+ L++++ TG+ P++YTYN +I C G++++ F + + N VT+ +LI G
Sbjct: 241 IELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGG 300
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG 156
LC E R++EA L +++ G PN+ +YNTLI+G G+
Sbjct: 301 LCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGN------------------- 341
Query: 157 VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
+DKA LF QMK +P + TY +I GF A + ++ EM +G+ P+ V
Sbjct: 342 ----LDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKV 397
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
T+ ++MD L ++ +++A ++ M + G+ + ++Y L+ G C+ G + A +LF S+
Sbjct: 398 TYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSL 457
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
+ M Y+ +I GYCK AL L EM G+ P+V YN+ +L + +
Sbjct: 458 DEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKW 517
Query: 337 ERAFKLFDEMQRDGV 351
A L +M G+
Sbjct: 518 TEAEVLLKDMIELGL 532
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
TH V + +IN + +++ E AL +M+ +G+ P +N L ++L + + E+A++
Sbjct: 80 TH-VLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWR 138
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+F+E + V D +++ I G C+ Y+ + E+ + + ++ Y LIDG
Sbjct: 139 VFNE-TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDG 195
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 111/360 (30%), Positives = 190/360 (52%), Gaps = 23/360 (6%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F Y ++ R P V ++ + + LF + GL PD T+ LIN +C
Sbjct: 816 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 875
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K G + F V ++++ +PN VT+T+LI GLC E + A L ++ G +PN+F
Sbjct: 876 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 935
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
TYN+++NGL ++G+ A+ L GEF G +N D VTY
Sbjct: 936 TYNSIVNGLCKSGNIEEAVKLV-------GEFEAAG----------------LNADTVTY 972
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
T+++ +C + + ++A+ +L EM+ +G+QP +VTFNV+M+ C +G +++ +LL+ M+
Sbjct: 973 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 1032
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G+ PNA +N+L+ +C+ + A ++ M S G +Y L+ G+CK + ++
Sbjct: 1033 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 1092
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A L+ EM KG V Y+ L + + A ++FD+M+R+G+AAD + F D
Sbjct: 1093 AWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 1152
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 198/405 (48%), Gaps = 12/405 (2%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++ ++ P V S++ + + D V L + + GL P+ Y Y +I C++
Sbjct: 714 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 773
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+++ ++R P+ V +T+LI G C I A+ F ++ P+V TY
Sbjct: 774 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 833
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDE 174
+I+G + G + A LF EM E + G + A + M
Sbjct: 834 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 893
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
+P+VVTYT++I G C D + A LL EM G+QPN+ T+N I++ LCK+G ++EA
Sbjct: 894 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 953
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+L+ G+ + Y TLMD +C +G +++A+E+ M G T+ ++++L+NG
Sbjct: 954 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 1013
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
+C + +E L ML+KGI P+ +N+L + ++ A ++ +M GV D
Sbjct: 1014 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 1073
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
TY + G CK + EA LF+ ++ + + Y+ LI G
Sbjct: 1074 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 1118
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 171/355 (48%), Gaps = 12/355 (3%)
Query: 40 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
F + G+ PD Y LI+ FCK G + + TP+ +T+T++I G C
Sbjct: 782 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 841
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV-- 157
++EA LF ++ G EP+ T+ LING + GH A + M V
Sbjct: 842 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 901
Query: 158 ----------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
EG +D A EL +M + P++ TY S++ G C + + EA L+ E
Sbjct: 902 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 961
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
G+ + VT+ +MD CK+G+MD+A +L M+ G++P +N LM+GFCL G +
Sbjct: 962 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 1021
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
++L M + G +++ L+ YC ++ A ++Y +M S+G+ PD Y L
Sbjct: 1022 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 1081
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
+ ++ A+ LF EM+ G + TY I G K +EA E+F +R
Sbjct: 1082 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 1136
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 186/375 (49%), Gaps = 12/375 (3%)
Query: 35 TVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 94
T + +F+ G+ ++ +YNI+I+ C++GR+ +L + +TP+ +++++++
Sbjct: 672 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 731
Query: 95 KGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN-- 152
G C + + L ++ G +PN + Y ++I L R A F EM
Sbjct: 732 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 791
Query: 153 ----------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
F G + A + F +M +I PDV+TYT++I GFC D EA L
Sbjct: 792 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 851
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
EM +G++P+ VTF +++ CK G M +A R+ + MIQ G PN Y TL+DG C
Sbjct: 852 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 911
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G ++ A EL M +G +F+Y+ ++NG CK+ IE A+ L GE + G+ D V
Sbjct: 912 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 971
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
Y TL + ++++A ++ EM G+ T+ ++G C + + + +L +
Sbjct: 972 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 1031
Query: 383 ILKCELDIRAYNCLI 397
+ +N L+
Sbjct: 1032 AKGIAPNATTFNSLV 1046
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 161/311 (51%), Gaps = 13/311 (4%)
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGL----YRTGHTIVALNLFEEM------ASGN 152
+ EA +F K+ +G +V + N + L Y+T I+ F E+ AS N
Sbjct: 634 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 693
Query: 153 G--EFGVE-GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
F + G + +A L L M+ + PDV++Y++V+ G+C + ++ L+ M +
Sbjct: 694 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 753
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
G++PN + I+ LC+ K+ EA MI+ G+ P+ VY TL+DGFC G + A
Sbjct: 754 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 813
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
+ F M S T V +Y+ +I+G+C+ ++ A L+ EM KG++PD V + L
Sbjct: 814 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 873
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
+ ++ AF++ + M + G + + TY T IDGLCK + A EL + + + +
Sbjct: 874 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 933
Query: 390 IRAYNCLIDGL 400
I YN +++GL
Sbjct: 934 IFTYNSIVNGL 944
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 23/225 (10%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ L K+ D + K + GL P + T+N+L+N FC G + G +L +
Sbjct: 971 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 1030
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
L PNA TF SL+K C + + A A++ + G P+ TY L+ G + +
Sbjct: 1031 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 1090
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
A LF+EM K + + V TY+ +I+GF + E
Sbjct: 1091 KEAWFLFQEM-----------------------KGKGFSVSVSTYSVLIKGFLKRKKFLE 1127
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
A+ + +M +G+ + F+ D K + D +D +I+
Sbjct: 1128 AREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 1172
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 215/431 (49%), Gaps = 33/431 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD++ + V ++N LAK F+++ G PD +TY+I++
Sbjct: 24 LFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGL 83
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV-FGCEPN 121
CK G + +LG++ S N +T++ +I G C SR+ +A +F + GC P+
Sbjct: 84 CKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPD 143
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFL 169
V T+N+L+ GL A LFE MA E V G +D+A L+
Sbjct: 144 VVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWE 203
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF----------- 218
+M +++ PD+V YTS + G C AN EA +M+ +G + + V F
Sbjct: 204 EMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKG 263
Query: 219 ------NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
N +++ LC++G +DEA + + MI P+A ++NTL+ C + R+ L
Sbjct: 264 HAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLL 323
Query: 273 FVSMESMG---CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
F M+SM C + +Y+I+++ CK K+++ A L EM + G+ PDVV Y+ L
Sbjct: 324 FQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDG 383
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
L ++ +++RA L +EM ++GV D++T + ++ L K + A+ T++ D
Sbjct: 384 LCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPD 443
Query: 390 IRAYNCLIDGL 400
+ YN L+DGL
Sbjct: 444 LVTYNTLLDGL 454
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 203/430 (47%), Gaps = 35/430 (8%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF M P V +FN L L + LF+ + G P++ +Y+ L++
Sbjct: 130 IFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGL 189
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK GR+ + ++ P+ V +TS + GLC +R+ EA K+ G + +
Sbjct: 190 CKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADA 249
Query: 123 FTYNTLINGLYRTGHTIVALN-----------------LFEEMASGNGEFGVEGF----- 160
++T+I L + GH A N FEEM S N E F
Sbjct: 250 VAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIH 309
Query: 161 -VDKAKEL---------FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG 210
V K+K L MK+ P++ TY ++ C A +EA+ L+ EM + G
Sbjct: 310 AVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYG 369
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
+ P+VVT++ ++D LCK GK+D A LL+ M + GV P++F ++++ G+V+ A
Sbjct: 370 LSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYAL 429
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
+M++ G T + +Y+ L++G CK I+ A++ +M++ PDV Y + L
Sbjct: 430 SHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITAL 489
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
Q A +F EM + GV DT Y + +DGL +N A+EL +T C+ D
Sbjct: 490 CRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL---CKPDF 546
Query: 391 RAYNCLIDGL 400
+ ++DGL
Sbjct: 547 VMHKMVVDGL 556
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 141/307 (45%), Gaps = 28/307 (9%)
Query: 3 IFDYMLNMRP--SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+F M +M+ PP + ++NI+ L K K D L + + GL PD+ TY+ L++
Sbjct: 323 LFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVD 382
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK+G++ +L + + P++ T S++ L ++ A + ++ G P
Sbjct: 383 GLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTP 442
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
++ TYNTL++GL + G +D+A +M PDV
Sbjct: 443 DLVTYNTLLDGLCKAGR-----------------------IDEAITFLAKMVAAKCTPDV 479
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+YT +I C + A + EM+ +GV P+ V ++ ++D L +NG D A LL
Sbjct: 480 FSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKT 539
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+ +P+ ++ ++DG C G+ A E+ M G F+Y ++ G K +
Sbjct: 540 SL---CKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGK 596
Query: 301 IEGALSL 307
++ A L
Sbjct: 597 VDKARQL 603
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 107/237 (45%), Gaps = 15/237 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ L L K D L + ++ G+FPD +T ++N K G+V +
Sbjct: 372 PDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSH 431
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + TP+ VT+ +L+ GLC RI EA K+ C P+VF+Y +I L R
Sbjct: 432 LETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCR 491
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+G A +F+EM G D A EL +K PD V
Sbjct: 492 SGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALEL---LKTSLCKPDFVM 548
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
+ V+ G C A +A ++ M D G + T+ ++ L K GK+D+A +L+D
Sbjct: 549 HKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVD 605
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 2/185 (1%)
Query: 218 FNVIMDELCKNGKMDEASRLLD-LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
+ V+ + L GK+ RL D L Q G + + F YN +D A E F M
Sbjct: 5 YTVVGEVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM 64
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
+ G F+YSI++ G CK E++ A L G++ G+K +V+ Y+ + + +V
Sbjct: 65 QRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRV 124
Query: 337 ERAFKLFDEMQR-DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
+ A ++F M G D T+ + + GLC + EA LF + CE ++ +Y+
Sbjct: 125 DDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYST 184
Query: 396 LIDGL 400
L+DGL
Sbjct: 185 LLDGL 189
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/174 (18%), Positives = 67/174 (38%), Gaps = 32/174 (18%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R S P + ++N L L K D ++ ++ + PD+++Y I+I C+ G+
Sbjct: 435 MKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQ 494
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSL--------------------------------IK 95
+ + +++ P+ V + SL +
Sbjct: 495 AAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKMVVD 554
Query: 96 GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
GLC + +A + ++ G + FTY ++ GL + G A L ++ +
Sbjct: 555 GLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDDAS 608
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 203/418 (48%), Gaps = 19/418 (4%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F IF+ M P V ++ + L K+ D + L +N TG P++ TY++L+
Sbjct: 120 FQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVE 179
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK GR GF +L + R F P+ + + +L+ GLC R+ EA L + GC P
Sbjct: 180 GLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYP 239
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELF 168
V TYN+L+ R+ A L + M+ V + +D A+ L
Sbjct: 240 TVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALL 299
Query: 169 LQMKDENINPDVVTYTSVIRGFC----YANDWN-EAKCLLIEMMDQ-GVQPNVVTFNVIM 222
QM PDV+TY+++I G C DW EA C ++EMM Q G PN T+ V++
Sbjct: 300 KQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVI 359
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
+ LC+ K +A LL MI V P+ ++ ++ C + ++ A ++F M C
Sbjct: 360 EGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECK 419
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
+Y+ LI+G K E++ A+ ++ E++ + +P V YN++ L + ++E A ++
Sbjct: 420 PNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRM 478
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ M D +Y I GLC+ S + EA ELF+ + +++ YN L++ L
Sbjct: 479 VEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNEL 536
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 124/418 (29%), Positives = 203/418 (48%), Gaps = 23/418 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M + R PP V N + L K + L FK + T PD+ T+NIL++
Sbjct: 52 LLDEMRD-RGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDAL 110
Query: 63 CKMGRVSHGFVVLGRILRS--CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
K GRV F + + S C PN VT+T++I GLC + ++ A L + GC P
Sbjct: 111 VKSGRVEEAFQIFESMHTSSQCL-PNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCP 169
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELF 168
NV TY+ L+ GL + G T L +EM + V + +D+A EL
Sbjct: 170 NVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELV 229
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
M P VVTY S++ FC + + A L+ M ++G P+V+ +N ++ LC++
Sbjct: 230 QLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRD 289
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN------RAKELFVSMESMGCT 282
++D+A LL M+ P+ Y+T++DG C RV+ A E+ M+ GC
Sbjct: 290 ARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCP 349
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
+Y+++I G C+ ++ + AL+L M+ + PD+ ++ + L + H ++ A+K+
Sbjct: 350 PNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKI 409
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
F M + Y IDGL K + +AV +F L + + YN ++DGL
Sbjct: 410 FGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE-LMVESFRPGVATYNSVLDGL 466
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 188/389 (48%), Gaps = 35/389 (8%)
Query: 18 CSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGR 77
C+ N+L + + + LF+ P+ +TY LI+ CK G++ + +L
Sbjct: 3 CALNLLV----RAGQHGQAVQLFREERCV---PNEFTYGSLIHGLCKAGKLDQAYELLDE 55
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
+ P +IKGLC R +A F + C P++ T+N L++ L ++G
Sbjct: 56 MRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGR 115
Query: 138 TIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
A +FE M + + P+VVTYT+VI G C +
Sbjct: 116 VEEAFQIFESMHTSS----------------------QCLPNVVTYTTVINGLCKDGKLD 153
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
A LL M + G PNV+T++V+++ LCK G+ D+ LL M + G +P+ +YNTL+
Sbjct: 154 RAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLL 213
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
+G C + R++ A EL M GC TV +Y+ L+ +C++K+++ A L M +G
Sbjct: 214 NGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCP 273
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN-----SYIV 372
PDV+ YNT+ L +++ A L +M D TY T IDGLCK+ + +
Sbjct: 274 PDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKL 333
Query: 373 EAV-ELFRTLRILKCELDIRAYNCLIDGL 400
EA E+ ++ C + Y +I+GL
Sbjct: 334 EAACEILEMMKQTGCPPNAGTYAVVIEGL 362
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 193/391 (49%), Gaps = 34/391 (8%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ L L K D L + G+ P + +N +I CK GR +
Sbjct: 32 TYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTV 91
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPNVFTYNTLINGLYRTGH 137
+ TP+ +TF L+ L R+ EA +F + C PNV TY T+INGL +
Sbjct: 92 AGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCK--- 148
Query: 138 TIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
+G +D+A EL M + P+V+TY+ ++ G C A +
Sbjct: 149 --------------------DGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTD 188
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
+ LL EM +G QP+V+ +N +++ LCK+ ++DEA L+ LMI+ G P YN+LM
Sbjct: 189 KGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLM 248
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
+ FC + +V+RA L M GC V +Y+ +I G C++ ++ A +L +M++
Sbjct: 249 ELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCV 308
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKL------FDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
PDV+ Y+T+ L + +V+ +KL + M++ G + TY I+GLC+
Sbjct: 309 PDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKS 368
Query: 372 VEAVELFRTLRILKCEL--DIRAYNCLIDGL 400
+A+ L R R++ E+ D+ +++ +I L
Sbjct: 369 QQALALLR--RMIDSEVVPDLSSFSMVIGSL 397
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 154/321 (47%), Gaps = 19/321 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L ++K D L + ++ G PD+ YN +I C+ R+ +
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQAL 298
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRI-----MEAA-ALFTKLRVFGCEPNVFTYNTL 128
L +++ + P+ +T++++I GLC + R+ +EAA + ++ GC PN TY +
Sbjct: 299 LKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVV 358
Query: 129 INGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENI 176
I GL R + AL L M G +D A ++F M +
Sbjct: 359 IEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSEREC 418
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
P+ V Y ++I G + ++A + E+M + +P V T+N ++D LC G+++EA R
Sbjct: 419 KPNPVAYAALIDGLSKGGEVDKA-VRVFELMVESFRPGVATYNSVLDGLCGVGRIEEAVR 477
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+++ MI P+ Y L+ G C V A ELF ++E+ G V Y++L+N C
Sbjct: 478 MVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELC 537
Query: 297 KNKEIEGALSLYGEMLSKGIK 317
K K + A + +++ G K
Sbjct: 538 KKKRLSDAHGVANKLIEAGYK 558
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 194/385 (50%), Gaps = 24/385 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FN L L K+ ++ +F + D+Y++ I+I C++G + GF V
Sbjct: 128 PGSNTFNNLLILLIKSNFFEKAWRVFNETKGN-VKLDVYSFGIMIKGCCEVGYLDKGFEV 186
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
LG++ +PN V +T+LI G C I LF K+ N +TY LING ++
Sbjct: 187 LGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFK 246
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G + L+E +MK I P+V TY S+I C
Sbjct: 247 MGLKKDGIELYE-----------------------KMKLTGIVPNVYTYNSMICRCCNDG 283
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
N A L EM ++GV NVVT+N ++ LC+ ++ EA RL+ M + G+ PN YN
Sbjct: 284 KLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYN 343
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+DG+C G +++A LF M+S G + ++ +Y+ILI G+ + K G + EM ++
Sbjct: 344 TLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEAR 403
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+ P V Y L L +E+AF+++ M++ G+ AD + Y I GLC + EA
Sbjct: 404 GLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEA 463
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+LF++L + + + YN +I G
Sbjct: 464 SKLFKSLDEMHLKPNDVIYNTMIYG 488
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 158/310 (50%), Gaps = 23/310 (7%)
Query: 37 LSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 96
+ L++++ TG+ P++YTYN +I C G++++ F + + N VT+ +LI G
Sbjct: 254 IELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGG 313
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG 156
LC E R++EA L +++ G PN+ +YNTLI+G G+
Sbjct: 314 LCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGN------------------- 354
Query: 157 VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
+DKA LF QMK +P + TY +I GF A + ++ EM +G+ P+ V
Sbjct: 355 ----LDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKV 410
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
T+ ++MD L ++ +++A ++ M + G+ + ++Y L+ G C+ G + A +LF S+
Sbjct: 411 TYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSL 470
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
+ M Y+ +I GYCK AL L EM G+ P+V YN+ +L + +
Sbjct: 471 DEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKW 530
Query: 337 ERAFKLFDEM 346
A L +M
Sbjct: 531 TEAEVLLKDM 540
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
TH V + +IN + +++ E AL + +M+ +G+ P +N L ++L + + E+A++
Sbjct: 93 TH-VLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWR 151
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+F+E + V D +++ I G C+ Y+ + E+ + + ++ Y LIDG
Sbjct: 152 VFNE-TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDG 208
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 203/418 (48%), Gaps = 19/418 (4%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F IF+ M P V ++ + L K+ D + L +N TG P++ TY++L+
Sbjct: 120 FQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVE 179
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK GR GF +L + R F P+ + + +L+ GLC R+ EA L + GC P
Sbjct: 180 GLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYP 239
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELF 168
V TYN+L+ R+ A L + M+ V + +D A+ L
Sbjct: 240 TVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALL 299
Query: 169 LQMKDENINPDVVTYTSVIRGFC----YANDWN-EAKCLLIEMMDQ-GVQPNVVTFNVIM 222
QM PDV+TY+++I G C DW EA C ++EMM Q G PN T+ V++
Sbjct: 300 KQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVI 359
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
+ LC+ K +A LL MI V P+ ++ ++ C + ++ A ++F M C
Sbjct: 360 EGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECK 419
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
+Y+ LI+G K E++ A+ ++ E++ + +P V YN++ L + ++E A ++
Sbjct: 420 PNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRM 478
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ M D +Y I GLC+ S + EA ELF+ + +++ YN L++ L
Sbjct: 479 VEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNEL 536
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 124/418 (29%), Positives = 203/418 (48%), Gaps = 23/418 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M + R PP V N + L K + L FK + T PD+ T+NIL++
Sbjct: 52 LLDEMRD-RGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDAL 110
Query: 63 CKMGRVSHGFVVLGRILRS--CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
K GRV F + + S C PN VT+T++I GLC + ++ A L + GC P
Sbjct: 111 VKSGRVEEAFQIFESMHTSSQCL-PNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCP 169
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELF 168
NV TY+ L+ GL + G T L +EM + V + +D+A EL
Sbjct: 170 NVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELV 229
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
M P VVTY S++ FC + + A L+ M ++G P+V+ +N ++ LC++
Sbjct: 230 QLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRD 289
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN------RAKELFVSMESMGCT 282
++D+A LL M+ P+ Y+T++DG C RV+ A E+ M+ GC
Sbjct: 290 ARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCP 349
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
+Y+++I G C+ ++ + AL+L M+ + PD+ ++ + L + H ++ A+K+
Sbjct: 350 PNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKI 409
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
F M + Y IDGL K + +AV +F L + + YN ++DGL
Sbjct: 410 FGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE-LMVESFRPGVATYNSVLDGL 466
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 188/389 (48%), Gaps = 35/389 (8%)
Query: 18 CSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGR 77
C+ N+L + + + LF+ P+ +TY LI+ CK G++ + +L
Sbjct: 3 CALNLLV----RAGQHGQAVQLFREERCV---PNEFTYGSLIHGLCKAGKLDQAYELLDE 55
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
+ P +I+GLC R +A F + C P++ T+N L++ L ++G
Sbjct: 56 MRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGR 115
Query: 138 TIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
A +FE M + + P+VVTYT+VI G C +
Sbjct: 116 VEEAFQIFESMHTSS----------------------QCLPNVVTYTTVINGLCKDGKLD 153
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
A LL M + G PNV+T++V+++ LCK G+ D+ LL M + G +P+ +YNTL+
Sbjct: 154 RAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLL 213
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
+G C + R++ A EL M GC TV +Y+ L+ +C++K+++ A L M +G
Sbjct: 214 NGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCP 273
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN-----SYIV 372
PDV+ YNT+ L +++ A L +M D TY T IDGLCK+ + +
Sbjct: 274 PDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKL 333
Query: 373 EAV-ELFRTLRILKCELDIRAYNCLIDGL 400
EA E+ ++ C + Y +I+GL
Sbjct: 334 EAACEILEMMKQTGCPPNAGTYAVVIEGL 362
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 193/391 (49%), Gaps = 34/391 (8%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ L L K D L + G+ P + +N +I CK GR +
Sbjct: 32 TYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTV 91
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPNVFTYNTLINGLYRTGH 137
+ TP+ +TF L+ L R+ EA +F + C PNV TY T+INGL +
Sbjct: 92 AGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCK--- 148
Query: 138 TIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
+G +D+A EL M + P+V+TY+ ++ G C A +
Sbjct: 149 --------------------DGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTD 188
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
+ LL EM +G QP+V+ +N +++ LCK+ ++DEA L+ LMI+ G P YN+LM
Sbjct: 189 KGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLM 248
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
+ FC + +V+RA L M GC V +Y+ +I G C++ ++ A +L +M++
Sbjct: 249 ELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCV 308
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKL------FDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
PDV+ Y+T+ L + +V+ +KL + M++ G + TY I+GLC+
Sbjct: 309 PDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKS 368
Query: 372 VEAVELFRTLRILKCEL--DIRAYNCLIDGL 400
+A+ L R R++ E+ D+ +++ +I L
Sbjct: 369 QQALALLR--RMIDSEVVPDLSSFSMVIGSL 397
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 154/321 (47%), Gaps = 19/321 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L ++K D L + ++ G PD+ YN +I C+ R+ +
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQAL 298
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRI-----MEAA-ALFTKLRVFGCEPNVFTYNTL 128
L +++ + P+ +T++++I GLC + R+ +EAA + ++ GC PN TY +
Sbjct: 299 LKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVV 358
Query: 129 INGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENI 176
I GL R + AL L M G +D A ++F M +
Sbjct: 359 IEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSEREC 418
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
P+ V Y ++I G + ++A + E+M + +P V T+N ++D LC G+++EA R
Sbjct: 419 KPNPVAYAALIDGLSKGGEVDKA-VRVFELMVESFRPGVATYNSVLDGLCGVGRIEEAVR 477
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+++ MI P+ Y L+ G C V A ELF ++E+ G V Y++L+N C
Sbjct: 478 MVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELC 537
Query: 297 KNKEIEGALSLYGEMLSKGIK 317
K K + A + +++ G K
Sbjct: 538 KKKRLSDAHGVANKLIEAGYK 558
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 124/384 (32%), Positives = 187/384 (48%), Gaps = 23/384 (5%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
VCS+ + L K +L L G P + TYN L+N + ++ V +L
Sbjct: 192 VCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILS 251
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ ++ N T+T LI+ S+I EA LF ++ G EP+V+ Y ++IN + G
Sbjct: 252 LMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFG 311
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+ A LF+EM + + P+ TY ++I G C A +
Sbjct: 312 NMKRAFVLFDEMT-----------------------ERRLVPNAYTYGALINGACKAGEM 348
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
A+ ++ +M +GV N V FN +MD CK G +DEA RL ++M Q G +AF N +
Sbjct: 349 KAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNII 408
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
GFC + R AK L ++ME G V S+SILI+ YCK + A L+ M KG
Sbjct: 409 ASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGK 468
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
P VV YN + ++E A+KL +EMQ G+ DT+TY + IDG + + A+E
Sbjct: 469 APSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALE 528
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
LF + L ++ Y +I GL
Sbjct: 529 LFNEMPQLGLNRNVVTYTVIISGL 552
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 173/360 (48%), Gaps = 23/360 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++ +L +++ + LF + G+ PD+Y Y +IN CK G + FV+
Sbjct: 262 VTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFD 321
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ PNA T+ +LI G C + A + ++ G + N +NTL++G
Sbjct: 322 EMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDG----- 376
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+ +G +D+A L M+ + D T + GFC +N
Sbjct: 377 ------------------YCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRR 418
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
EAK LL+ M ++GV PNVV+F++++D CK EA RL +M + G P+ YN
Sbjct: 419 EEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAF 478
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
++ +C G++ A +L M+ G ++Y+ LI+G + ++ AL L+ EM G+
Sbjct: 479 IERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGL 538
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+VV Y + L + + + AFKL+DEM ++G+ D Y + I L K +V +E
Sbjct: 539 NRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLE 598
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 109/197 (55%)
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
L +M+D G++ V ++ ++D LCK G++ A L+D ++ G +P+ YNTL++G+
Sbjct: 180 LRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIE 239
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
V E+ ME + V +Y++LI Y ++ +IE A L+ EML KGI+PDV I
Sbjct: 240 IKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYI 299
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
Y ++ + ++RAF LFDEM + + +TY I+G CK + A + ++
Sbjct: 300 YTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQ 359
Query: 383 ILKCELDIRAYNCLIDG 399
+++ +N L+DG
Sbjct: 360 SKGVDVNRVIFNTLMDG 376
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 168/394 (42%), Gaps = 59/394 (14%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAA- 107
PDL + IL + + + + VL I+ N S I G E I+E
Sbjct: 66 PDLPAHLILFSRLYRARKFAEMKNVLKFIVNDGNLWSNVERIVSSIGGEFNEPSIVEKFC 125
Query: 108 ----ALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM----ASGNGEFGVEG 159
++ R+F VF Y + G I + FE + SGN E VE
Sbjct: 126 DMLFRVYMDNRMFDSSLEVFDYAR------KKGFEIDERSCFEFLLALKRSGNMELCVE- 178
Query: 160 FVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 219
QM D I V ++T+V+ G C + AK L+ E++ +G +P+V+T+N
Sbjct: 179 -------FLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYN 231
Query: 220 VIM-----------------------------------DELCKNGKMDEASRLLDLMIQI 244
++ + ++ K++EA +L D M++
Sbjct: 232 TLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKK 291
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G+ P+ ++Y ++++ C G + RA LF M ++Y LING CK E++ A
Sbjct: 292 GIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAA 351
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
+ +M SKG+ + VI+NTL + ++ A +L + MQ+ G D +T G
Sbjct: 352 EMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASG 411
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
C+++ EA L T+ ++ +++ LID
Sbjct: 412 FCRSNRREEAKRLLLTMEERGVAPNVVSFSILID 445
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%)
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
L ++G M+ L M+ G+ + ++DG C G V RAK L + G +
Sbjct: 167 LKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPS 226
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
V +Y+ L+NGY + K++ G + M + +V Y L ++E A KLFD
Sbjct: 227 VITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFD 286
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
EM + G+ D + Y + I+ CK + A LF + + + Y LI+G
Sbjct: 287 EMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALING 341
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 58/136 (42%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++ + P V ++N K + L + GL PD YTY LI+ G
Sbjct: 462 VMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASG 521
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
V + + + N VT+T +I GL + R EA L+ ++ G P+ Y+
Sbjct: 522 NVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYS 581
Query: 127 TLINGLYRTGHTIVAL 142
+LI L++ G + L
Sbjct: 582 SLIASLHKVGPLVSGL 597
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 179/365 (49%), Gaps = 23/365 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +F+++ L K + + + + + G P + TYN +I+ +CK G++ +L
Sbjct: 229 VVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLK 288
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ PN +TF LI G C + + A +F +++ G +PNV TYN+LINGL G
Sbjct: 289 EMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNG 348
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
AL L ++M SG G + P+VVTY ++I GFC
Sbjct: 349 KLDEALGLQDKM-SGMG----------------------LKPNVVTYNALINGFCKKKML 385
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
EA+ +L ++ +G+ PNV+TFN ++D K G+MD+A L +M+ GV PN YN L
Sbjct: 386 KEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCL 445
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ GFC G V A++L ME G + +Y+IL++ CK E A+ L EM G+
Sbjct: 446 IVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGL 505
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
P + YN L F A + M++ G A+ TY I G C + EA
Sbjct: 506 NPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANR 565
Query: 377 LFRTL 381
L +
Sbjct: 566 LLNEM 570
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 120/379 (31%), Positives = 180/379 (47%), Gaps = 23/379 (6%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
++L KN D L F R G + N ++ K GR+ V ++R
Sbjct: 163 DMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIR 222
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
N VTF +I GLC + +A + ++ +G P+V TYNT+I+G + G
Sbjct: 223 RRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFK 282
Query: 141 ALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
A L +EM + + I+P+ +T+ +I GFC + AK
Sbjct: 283 ADALLKEMVA-----------------------KRIHPNEITFNILIDGFCRDENVTAAK 319
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
+ EM QG+QPNVVT+N +++ LC NGK+DEA L D M +G++PN YN L++GF
Sbjct: 320 KVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGF 379
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
C + A+E+ + G V +++ LI+ Y K ++ A L ML G+ P+V
Sbjct: 380 CKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNV 439
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
YN L V V+ A KL EM+ +G+ AD TY +D LCK +AV L
Sbjct: 440 STYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDE 499
Query: 381 LRILKCELDIRAYNCLIDG 399
+ + YN LIDG
Sbjct: 500 MFEVGLNPSHLTYNALIDG 518
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 166/330 (50%), Gaps = 12/330 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + K +L K + + + P+ T+NILI+ FC+ V+ V
Sbjct: 262 PSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKV 321
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R PN VT+ SLI GLC+ ++ EA L K+ G +PNV TYN LING +
Sbjct: 322 FEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCK 381
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
A + +++ +G G +D A L M D + P+V T
Sbjct: 382 KKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVST 441
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I GFC + EA+ L EM G++ ++VT+N+++D LCK G+ +A RLLD M
Sbjct: 442 YNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMF 501
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
++G+ P+ YN L+DG+ G A + ME G + +Y++LI G+C ++E
Sbjct: 502 EVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLE 561
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
A L EML KG+ P+ Y+ L + E
Sbjct: 562 EANRLLNEMLEKGLIPNRTTYDILRDEMME 591
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 183/380 (48%), Gaps = 26/380 (6%)
Query: 23 LFGCLAKNKHYDTVLSLFKRLNSTGLF--PDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
L AKN HY ++F L+ G + + ++L+ + K G + R
Sbjct: 129 LLDSFAKNAHYSNS-TIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGD 187
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
F +A++ ++ L E RI +++ ++ NV T++ +INGL + G
Sbjct: 188 YGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGK--- 244
Query: 141 ALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
KA ++ MK +P V+TY ++I G+C A +A
Sbjct: 245 --------------------FQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKAD 284
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
LL EM+ + + PN +TFN+++D C++ + A ++ + M + G++PN YN+L++G
Sbjct: 285 ALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGL 344
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
C G+++ A L M MG V +Y+ LING+CK K ++ A + ++ +G+ P+V
Sbjct: 345 CSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNV 404
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
+ +NTL + +++ AF L M GV + TY I G C+ + EA +L +
Sbjct: 405 ITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKE 464
Query: 381 LRILKCELDIRAYNCLIDGL 400
+ + D+ YN L+D L
Sbjct: 465 MEGNGLKADLVTYNILVDAL 484
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 23/219 (10%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V +FN L K D L + TG+ P++ TYN LI FC+ G V
Sbjct: 398 RGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKE 457
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ + + + VT+ L+ LC + +A L ++ G P+ TYN LI+
Sbjct: 458 ARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALID 517
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
G +R G++ ALN+ ++ K N +VTY +I+GF
Sbjct: 518 GYFREGNSTAALNV---------------------RTLMEKKGRRAN--IVTYNVLIKGF 554
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
C EA LL EM+++G+ PN T++++ DE+ + G
Sbjct: 555 CNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 593
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 124/384 (32%), Positives = 187/384 (48%), Gaps = 23/384 (5%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
VCS+ + L K +L L G P + TYN L+N + ++ V +L
Sbjct: 188 VCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILS 247
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ ++ N T+T LI+ S+I EA LF ++ G EP+V+ Y ++IN + G
Sbjct: 248 LMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFG 307
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+ A LF+EM + + P+ TY ++I G C A +
Sbjct: 308 NMKRAFVLFDEMT-----------------------ERRLVPNAYTYGALINGACKAGEM 344
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
A+ ++ +M +GV N V FN +MD CK G +DEA RL ++M Q G +AF N +
Sbjct: 345 KAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNII 404
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
GFC + R AK L ++ME G V S+SILI+ YCK + A L+ M KG
Sbjct: 405 ASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGK 464
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
P VV YN + ++E A+KL +EMQ G+ DT+TY + IDG + + A+E
Sbjct: 465 APSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALE 524
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
LF + L ++ Y +I GL
Sbjct: 525 LFNEMPQLGLNRNVVTYTVIISGL 548
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 173/360 (48%), Gaps = 23/360 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++ +L +++ + LF + G+ PD+Y Y +IN CK G + FV+
Sbjct: 258 VTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFD 317
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ PNA T+ +LI G C + A + ++ G + N +NTL++G
Sbjct: 318 EMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDG----- 372
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+ +G +D+A L M+ + D T + GFC +N
Sbjct: 373 ------------------YCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRR 414
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
EAK LL+ M ++GV PNVV+F++++D CK EA RL +M + G P+ YN
Sbjct: 415 EEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAF 474
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
++ +C G++ A +L M+ G ++Y+ LI+G + ++ AL L+ EM G+
Sbjct: 475 IERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGL 534
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+VV Y + L + + + AFKL+DEM ++G+ D Y + I L K +V +E
Sbjct: 535 NRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLE 594
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 109/197 (55%)
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
L +M+D G++ V ++ ++D LCK G++ A L+D ++ G +P+ YNTL++G+
Sbjct: 176 LRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIE 235
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
V E+ ME + V +Y++LI Y ++ +IE A L+ EML KGI+PDV I
Sbjct: 236 IKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYI 295
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
Y ++ + ++RAF LFDEM + + +TY I+G CK + A + ++
Sbjct: 296 YTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQ 355
Query: 383 ILKCELDIRAYNCLIDG 399
+++ +N L+DG
Sbjct: 356 SKGVDVNRVIFNTLMDG 372
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 168/394 (42%), Gaps = 59/394 (14%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAA- 107
PDL + IL + + + + VL I+ N S I G E I+E
Sbjct: 62 PDLPAHLILFSRLYRARKFAEMKNVLKFIVNDGNLWSNVERIVSSIGGEFNEPSIVEKFC 121
Query: 108 ----ALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM----ASGNGEFGVEG 159
++ R+F VF Y + G I + FE + SGN E VE
Sbjct: 122 DMLFRVYMDNRMFDSSLEVFDYAR------KKGFEIDERSCFEFLLALKRSGNMELCVE- 174
Query: 160 FVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 219
QM D I V ++T+V+ G C + AK L+ E++ +G +P+V+T+N
Sbjct: 175 -------FLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYN 227
Query: 220 VIM-----------------------------------DELCKNGKMDEASRLLDLMIQI 244
++ + ++ K++EA +L D M++
Sbjct: 228 TLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKK 287
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G+ P+ ++Y ++++ C G + RA LF M ++Y LING CK E++ A
Sbjct: 288 GIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAA 347
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
+ +M SKG+ + VI+NTL + ++ A +L + MQ+ G D +T G
Sbjct: 348 EMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASG 407
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
C+++ EA L T+ ++ +++ LID
Sbjct: 408 FCRSNRREEAKRLLLTMEERGVAPNVVSFSILID 441
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%)
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
L ++G M+ L M+ G+ + ++DG C G V RAK L + G +
Sbjct: 163 LKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPS 222
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
V +Y+ L+NGY + K++ G + M + +V Y L ++E A KLFD
Sbjct: 223 VITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFD 282
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
EM + G+ D + Y + I+ CK + A LF + + + Y LI+G
Sbjct: 283 EMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALING 337
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 58/136 (42%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++ + P V ++N K + L + GL PD YTY LI+ G
Sbjct: 458 VMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASG 517
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
V + + + N VT+T +I GL + R EA L+ ++ G P+ Y+
Sbjct: 518 NVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYS 577
Query: 127 TLINGLYRTGHTIVAL 142
+LI L++ G + L
Sbjct: 578 SLIASLHKVGPLVSGL 593
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 215/431 (49%), Gaps = 33/431 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD++ + V ++N LAK F+++ G PD +TY+I++
Sbjct: 24 LFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGL 83
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV-FGCEPN 121
CK G + +LG++ S N +T++ +I G C SR+ +A +F + GC P+
Sbjct: 84 CKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPD 143
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFL 169
V T+N+L+ GL A LFE MA E V G +D+A L+
Sbjct: 144 VVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWE 203
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF----------- 218
+M +++ PD+V YTS + G C AN EA +M+ +G + + V F
Sbjct: 204 EMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKG 263
Query: 219 ------NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
N +++ LC++G +DEA + + MI P+A ++NTL+ C + R+ L
Sbjct: 264 HAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLL 323
Query: 273 FVSMESMG---CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
F M+SM C + +Y+I+++ CK K+++ A L EM + G+ PDVV Y+ L
Sbjct: 324 FQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDG 383
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
L ++ +++RA L +EM ++GV D++T + ++ L K + A+ T++ D
Sbjct: 384 LCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPD 443
Query: 390 IRAYNCLIDGL 400
+ YN L+DGL
Sbjct: 444 LVTYNTLLDGL 454
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 204/430 (47%), Gaps = 35/430 (8%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF M + P V +FN L L + LF+ + G P++ +Y+ L++
Sbjct: 130 IFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGL 189
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK GR+ + ++ P+ V +TS + GLC +R+ EA K+ G + +
Sbjct: 190 CKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADA 249
Query: 123 FTYNTLINGLYRTGHTIVALN-----------------LFEEMASGNGEFGVEGF----- 160
++T+I L + GH A N FEEM S N E F
Sbjct: 250 VAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIH 309
Query: 161 -VDKAKEL---------FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG 210
V K+K L MK+ P++ TY ++ C A +EA+ L+ EM + G
Sbjct: 310 AVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYG 369
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
+ P+VVT++ ++D LCK GK+D A LL+ M + GV P++F ++++ G+V+ A
Sbjct: 370 LSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYAL 429
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
+M++ G T + +Y+ L++G CK I+ A++ +M++ PDV Y + L
Sbjct: 430 SHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITAL 489
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
Q A +F EM + GV DT Y + +DGL +N A+EL +T C+ D
Sbjct: 490 CRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL---CKPDF 546
Query: 391 RAYNCLIDGL 400
+ ++DGL
Sbjct: 547 VMHKMVLDGL 556
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 173/387 (44%), Gaps = 43/387 (11%)
Query: 35 TVLSLFKRLN-STGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
T++ LF L G ++TYN ++ K + ++ R + P+ T++ +
Sbjct: 20 TIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIV 79
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG 153
++GLC + +A L +LR G + NV TY+ +I+G + AL +F+ M+SG G
Sbjct: 80 LRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGG 139
Query: 154 EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
PDVVT+ S+++G C +EA L M G +P
Sbjct: 140 ----------------------CVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEP 177
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
NV++++ ++D LCK G++DEA RL + M++ P+ Y + + G C RV A +
Sbjct: 178 NVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCC 237
Query: 274 VSMESMGCTHTVFSYSILINGYCK--------NKEIEG---------ALSLYGEMLSKGI 316
M + G ++S +I CK N+ IE A + EM+S+
Sbjct: 238 RKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNH 297
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG---VAADTWTYRTFIDGLCKNSYIVE 373
P ++NTL + + ++ LF M+ + TY +D LCK + E
Sbjct: 298 PPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDE 357
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A EL + D+ Y+ L+DGL
Sbjct: 358 AQELVNEMANYGLSPDVVTYSALVDGL 384
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 152/319 (47%), Gaps = 19/319 (5%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLF---PDLYTYNILIN 60
F+ M++ R PP FN L + K+K + LF+R+ S F P+L TYNI+++
Sbjct: 289 FEEMIS-RNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVD 347
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK ++ ++ + +P+ VT+++L+ GLC ++ A L ++ G P
Sbjct: 348 NLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFP 407
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEM-ASGNGEFGV-----------EGFVDKAKELF 168
+ FT +++N L + G AL+ E M A G+ V G +D+A
Sbjct: 408 DSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFL 467
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+M PDV +YT +I C + A + EM+ +GV P+ V ++ ++D L +N
Sbjct: 468 AKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARN 527
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G D A LL + +P+ ++ ++DG C G+ A E+ M G F+Y
Sbjct: 528 GLEDLALELLKTSL---CKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTY 584
Query: 289 SILINGYCKNKEIEGALSL 307
+++G K +++ A L
Sbjct: 585 ISVVSGLRKLGKVDKARQL 603
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 143/297 (48%), Gaps = 22/297 (7%)
Query: 3 IFDYMLNMRP--SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+F M +M+ PP + ++NI+ L K K D L + + GL PD+ TY+ L++
Sbjct: 323 LFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVD 382
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK+G++ +L + + P++ T S++ L ++ A + ++ G P
Sbjct: 383 GLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTP 442
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELF 168
++ TYNTL++GL + G A+ +M + V G A +F
Sbjct: 443 DLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIF 502
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV-QPNVVTFNVIMDELCK 227
+M + PD V Y S++ G N + L +E++ + +P+ V +++D LCK
Sbjct: 503 QEMVKRGVLPDTVLYHSLLDGLAR----NGLEDLALELLKTSLCKPDFVMHKMVLDGLCK 558
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
GK ++A +++ M G +AF Y +++ G G+V++A++L ++ THT
Sbjct: 559 AGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQL---VDDASETHT 612
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 2/185 (1%)
Query: 218 FNVIMDELCKNGKMDEASRLLD-LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
+ V+ + L GK+ RL D L Q G + + F YN +D A E F M
Sbjct: 5 YTVVGEVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM 64
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
+ G F+YSI++ G CK E++ A L G++ G+K +V+ Y+ + + +V
Sbjct: 65 QRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRV 124
Query: 337 ERAFKLFDEMQR-DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
+ A ++F M G D T+ + + GLC + EA LF + CE ++ +Y+
Sbjct: 125 DDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYST 184
Query: 396 LIDGL 400
L+DGL
Sbjct: 185 LLDGL 189
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 201/398 (50%), Gaps = 14/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++NIL + +R+ GL PDL TY ILI C+MG + F +
Sbjct: 338 PDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKL 397
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++L + VT+T L+ LC RI EA L ++ V G +P++ TY+ LI+GL +
Sbjct: 398 KEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCK 457
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G A+ L+EEM S +G F +G + +A+ F + ++ +++
Sbjct: 458 RGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFE-KGAISEAQMYFDSVTKSDVAEEII 516
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y +I G+ + EA +++++G+ P +VTFN ++ CK GK+ EA +LLD +
Sbjct: 517 LYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTI 576
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
G+ P + Y TLM+G+C G ++ ++ ME+ T +Y++++ G CK +
Sbjct: 577 KVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRL 636
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
++ L M ++G+ PD + YNT+ + H +++AF+L ++M + + TY
Sbjct: 637 HESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVL 696
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I+GLC + +A L TL+ L AY +I
Sbjct: 697 INGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKA 734
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 186/381 (48%), Gaps = 12/381 (3%)
Query: 31 KHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTF 90
+H D + ++ + ++G+ + YT ILI+ C+ R+ L F P+ V+F
Sbjct: 214 RHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSF 273
Query: 91 TSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS 150
+L+ G C + A + F + +G P+V++YN L++GL G AL +M +
Sbjct: 274 NALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMEN 333
Query: 151 GNGE------------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
E F + G + A ++ +M +NPD+VTYT +I G C + E
Sbjct: 334 HGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEE 393
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
+ L +M+ QG++ ++VT+ V++ LCK+G++DEA LL M IG++P+ Y+ L+
Sbjct: 394 SFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIH 453
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G C G V A EL+ M S F S +I+G + I A + + +
Sbjct: 454 GLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAE 513
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
++++YN + ++ + A + + ++ G++ T+ + I G CK + EAV+L
Sbjct: 514 EIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLL 573
Query: 379 RTLRILKCELDIRAYNCLIDG 399
T+++ Y L++G
Sbjct: 574 DTIKVHGLVPTSVTYTTLMNG 594
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 168/374 (44%), Gaps = 20/374 (5%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ ++ +L L K+ D + L + GL PDL TY++LI+ CK G V +
Sbjct: 410 IVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYE 469
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ PN+ +++I GL + I EA F + + YN +I+G + G
Sbjct: 470 EMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLG 529
Query: 137 HTIVALNLFEEMASGNGEFGVE-----------GFVDKAK-----ELFLQMKDENINPDV 180
+ A+ ++++ E G+ GF K K +L +K + P
Sbjct: 530 NIGEAVRSYKQII----EKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTS 585
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTYT+++ G+C D + +L EM + ++P +T+ V++ LCK G++ E+ +LL
Sbjct: 586 VTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKY 645
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M G+ P+ YNT++ FC + +A +L M + +Y++LING C
Sbjct: 646 MYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGN 705
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
++ A L + + I+ V Y T+ V+ A F +M G Y
Sbjct: 706 LKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSA 765
Query: 361 FIDGLCKNSYIVEA 374
I+ LCK + I +A
Sbjct: 766 VINRLCKRNLITDA 779
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 164/352 (46%), Gaps = 24/352 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+++ M + R P I+ G K + + F + + + ++ YNI+I+ +
Sbjct: 467 LYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQM-YFDSVTKSDVAEEIILYNIMIDGY 525
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K+G + +I+ +P VTF SLI G C + ++ EA L ++V G P
Sbjct: 526 AKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTS 585
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TY TL+NG + EG + ++ +M+ + I P +T
Sbjct: 586 VTYTTLMNG-----------------------YCEEGDMHSMFDMLHEMEAKAIKPTQIT 622
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT V++G C +E+ LL M +G+ P+ +T+N ++ CK + +A +L + M+
Sbjct: 623 YTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQML 682
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q ++P+ YN L++G C+ G + A L V+++ T +Y+ +I +C +++
Sbjct: 683 QHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQ 742
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
AL + +M+ +G + + Y+ + L + + + A F M G+ D
Sbjct: 743 NALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPD 794
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 150/299 (50%), Gaps = 18/299 (6%)
Query: 98 CAESR---IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM-ASG-- 151
CA SR + +A + K++V + ++ TYN+L LY HT + +++ E+ ASG
Sbjct: 176 CAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSL---LYNLRHTDIMWDVYNEIKASGVP 232
Query: 152 NGEFGVEGFVD---------KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
E+ +D A + E P VV++ +++ GFC + AK
Sbjct: 233 QNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSF 292
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
M+ G+ P+V ++N+++ LC G M+EA + M GV P+ YN L +GF +
Sbjct: 293 FCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRI 352
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G ++ A ++ M G + +Y+ILI G+C+ IE + L +MLS+G+K +V
Sbjct: 353 LGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVT 412
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
Y L L + +++ A L EM+ G+ D TY I GLCK + EA+EL+ +
Sbjct: 413 YTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEM 471
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 180/348 (51%), Gaps = 25/348 (7%)
Query: 55 YNILINCFCKMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL 113
YN L+N CK +V F + ++ F P+ V+++ LI G C + A L+ ++
Sbjct: 449 YNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQM 508
Query: 114 RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKD 173
C PNV TYN +NGL R G A ++EEM +
Sbjct: 509 IDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAG--------------------- 547
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
+PDV+TY+++I GF A ++A L M+ +G +PN VT+N ++ LCK K DE
Sbjct: 548 --CSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDE 605
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A L M++ G P+ Y TL+ GFC G++ +A E+F M S G V +Y+ L+
Sbjct: 606 AHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLK 665
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD-GVA 352
G+ + + A L+ M+S+ KPD V +N + L + +++ A ++F+ M++D G +
Sbjct: 666 GFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCS 725
Query: 353 ADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D TY + I GLC + EA+++F+ + LK D A+N L++ +
Sbjct: 726 PDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAI 773
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 190/404 (47%), Gaps = 18/404 (4%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
S PV +++L L ++ D + + P T + +I CK GRV
Sbjct: 337 SSQPV--YDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSAL 394
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGCEPNVFTYNTLIN 130
+L +++ + P+ T + LI LC +I EA + ++ + F+YN+L+N
Sbjct: 395 SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLN 454
Query: 131 GLYRTGHTIVALNLFEEMASGNG--------EFGVEGF-----VDKAKELFLQMKDENIN 177
L + A +F M S ++GF + +A++L+ QM D N
Sbjct: 455 SLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV 514
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P+V TY + + G +A+ + EM+ G P+V+T++ ++ K D+A L
Sbjct: 515 PNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHEL 574
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
+ MI G RPNA YN L+ G C + + A ELF M GC +Y+ L+ G+C
Sbjct: 575 FETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCN 634
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+IE A+ ++ EM+SKG PDVV YN L F + A +LF M DT +
Sbjct: 635 VGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVS 694
Query: 358 YRTFIDGLCKNSYIVEAVELF-RTLRILKCELDIRAYNCLIDGL 400
+ IDGL K + +AVE+F R + C D+ YN LI GL
Sbjct: 695 HNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGL 738
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 159/328 (48%), Gaps = 24/328 (7%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F IF M++ R P V S++IL K L+K++ P++ TYN +N
Sbjct: 466 FAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLN 525
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+ GR++ V ++ + +P+ +T+++LI G + +A LF + GC P
Sbjct: 526 GLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRP 585
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
N TYN L++GL + E D+A ELF +M + +PD
Sbjct: 586 NAVTYNCLLHGLCK-----------------------ESKPDEAHELFRKMVERGCDPDR 622
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTYT+++ GFC +A + EM+ +G P+VV +N ++ + GK EA +L +
Sbjct: 623 VTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQV 682
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES-MGCTHTVFSYSILINGYCKNK 299
M+ +P+ +N ++DG R++ A E+F ME GC+ + +Y+ LI G C +
Sbjct: 683 MVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQ 742
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLF 327
+ A+ ++ E+ + PD +N L
Sbjct: 743 RLSEAMKVFKEIDRLKLSPDPHAFNVLL 770
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 180/432 (41%), Gaps = 50/432 (11%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ +L ++ D + F + G P Y + C G+ V GR
Sbjct: 166 TYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRD 225
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
L + +L+ + + +EA+ LF + GC+P+ Y+ ++ + +
Sbjct: 226 LEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENL 285
Query: 139 IVALNLFEEMA---------------------SGNGEFGVE------------------- 158
A LF EMA SG E E
Sbjct: 286 DEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDML 345
Query: 159 -------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
G +DKA+E L++ NI P T SVI+ C A + A LL M+ +G
Sbjct: 346 IRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGY 405
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ--IGVRPNAFVYNTLMDGFCLTGRVNRA 269
P++ T +++++ELCK K+ EA L M + + F YN+L++ C +V++A
Sbjct: 406 CPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQA 465
Query: 270 KELFVSMES-MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
+F +M S V SYSILI+G+CK E+ A LY +M+ P+V YN
Sbjct: 466 FAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLN 525
Query: 329 VLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
L ++ A +++EM G + D TY T I G +A ELF T+ C
Sbjct: 526 GLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRP 585
Query: 389 DIRAYNCLIDGL 400
+ YNCL+ GL
Sbjct: 586 NAVTYNCLLHGL 597
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 169/415 (40%), Gaps = 50/415 (12%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 95
L+ F+ L + D++TYN L++ + + V +++ PN T+ L++
Sbjct: 113 ALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQ 172
Query: 96 GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE--------- 146
C E EA F ++ G +P+ Y + L TG +F
Sbjct: 173 SSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAV 232
Query: 147 EMASGNG---EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
EM F ++ +A +LF M PD Y+ ++ C + +EA L
Sbjct: 233 EMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLF 292
Query: 204 IEMMDQGVQP-NVVTFNVIMDELCKNGKMDEA------------------SRLLDLMIQI 244
+EM + P N V + + LCK+GK+++A L+ L+I+
Sbjct: 293 LEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIES 352
Query: 245 G----------------VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G ++P++ ++++ C GRV+ A L +M G + ++
Sbjct: 353 GRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATH 412
Query: 289 SILINGYCKNKEIEGALSLYGEMLSK--GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
S+LIN CK +I+ A M K YN+L L + +V +AF +F M
Sbjct: 413 SMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTM 472
Query: 347 -QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D +Y IDG CK + A +L++ + L C ++ YN ++GL
Sbjct: 473 VSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGL 527
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 119/273 (43%), Gaps = 25/273 (9%)
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKA 164
EA F L+ + +VFTYN L++ L R A +FE+M +
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVA-------------- 157
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
+ + P+ TY +++ CY + +EA EM+D+G +P+ + + +
Sbjct: 158 ---------QGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTEC 208
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
L GK E SR+ ++ V + L+ F + + A +LF +M GC
Sbjct: 209 LKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPD 268
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP-DVVIYNTLFVVLFEIHQVERAFKLF 343
YS ++ +CK + ++ A L+ EM + P + V + L + ++E+AF+
Sbjct: 269 ATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEAC 328
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
MQ + +++ Y I L ++ I +A E
Sbjct: 329 RTMQ-ESLSSSQPVYDMLIRLLIESGRIDKAEE 360
>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
Length = 348
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 109/330 (33%), Positives = 181/330 (54%), Gaps = 12/330 (3%)
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
+ PN +T +LIKGLC + +I +A KL G + +Y TLI+GL + G T AL
Sbjct: 3 YHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAAL 62
Query: 143 NLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
+L + + + + V+ A +L+ +M + I+P+VVTY+++I GF
Sbjct: 63 DLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGF 122
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
+A L +++ + ++P+ TFN+++D CK+ KM E + +M++ G+ P+
Sbjct: 123 FVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDV 182
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
YN+L+DG+ L VN AK +F +M G + SY+ILING+CK K+++ A++L+ E
Sbjct: 183 VTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNE 242
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M K I P+VV YN+L L + ++ A +L D+M GV + TY + ID L K
Sbjct: 243 MHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQ 302
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +A+ L + + + Y LIDGL
Sbjct: 303 VDKAIALITKFKDQGIQPSMYTYTILIDGL 332
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 176/367 (47%), Gaps = 23/367 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + N L L +L + G D +Y LI+ CK+G +
Sbjct: 5 PNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDL 64
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R+ NAV + ++I G+C + + +A L++++ G PNV TY+ LI+G +
Sbjct: 65 LQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFV 124
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G A++LF ++ ENI PD T+ ++ GFC
Sbjct: 125 VGKLKDAIDLFNKIIL-----------------------ENIKPDGYTFNILVDGFCKDR 161
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
E K + MM QG+ P+VVT+N ++D +++ A + + M Q GV P+ YN
Sbjct: 162 KMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYN 221
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L++GFC +V++A LF M V +Y+ LI+G K+ I AL L +M +
Sbjct: 222 ILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDR 281
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+ P+++ YN++ LF+ HQV++A L + + G+ +TY IDGLCK + +A
Sbjct: 282 GVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDA 341
Query: 375 VELFRTL 381
+F L
Sbjct: 342 RNIFEDL 348
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 96/190 (50%)
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
G PN +T N ++ LC G++ +A D ++ +G + Y TL+ G C G A
Sbjct: 2 GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
+L ++ Y+ +I G CK+K + A LY EM+SKGI P+VV Y+ L
Sbjct: 62 LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
F + +++ A LF+++ + + D +T+ +DG CK+ + E +F + D
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 181
Query: 390 IRAYNCLIDG 399
+ YN L+DG
Sbjct: 182 VVTYNSLVDG 191
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS 69
R PP + ++N + L K D ++L + G+ P +YTY ILI+ CK GR+
Sbjct: 281 RGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLK 339
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%)
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G P+ + NTL L Q+ +AF D++ G D +Y T I GLCK A
Sbjct: 2 GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
++L + + +L+ YN +I G+
Sbjct: 62 LDLLQRVDGKLVQLNAVMYNTVIYGM 87
>gi|357153642|ref|XP_003576519.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Brachypodium distachyon]
Length = 620
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 193/376 (51%), Gaps = 12/376 (3%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P+ P + + N + L K + +D V LF + S G+ P L TYN L+N G ++
Sbjct: 120 PTLPALPACNAILDGLVKARRFDRVWKLFDEMLSRGMVPSLVTYNTLVNACRHEGDMTKA 179
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
+ V +++ PN VT++++I LC E ++EA LF ++ G +PN++TYN L++
Sbjct: 180 WEVWNQMVARRIDPNVVTYSTMICVLCEEGCVIEAERLFIMMKETGVQPNLYTYNALMSS 239
Query: 132 LYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPD 179
+ L L++E+ G F + + K FL+M I P
Sbjct: 240 HCKRDGVNRTLTLYQELLKSGLVPNAVIITTLIGGFFLANRISDVKNAFLEMHRYGIAPT 299
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
V Y S+I G + EA + +M G+ P+ T ++I+ LC G++ A+R L+
Sbjct: 300 VPVYNSLIDGAFRSGYAQEALTVYQDMTRVGLCPDEFTCSIIVRGLCCGGQVQVATRFLE 359
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
LM Q G+ NA YN L+D C G + A M +G V +YS LI+G+ K +
Sbjct: 360 LMQQSGINLNAAAYNALIDEHCKDGNLAEALATCTRMNEVGIEPNVVTYSSLIDGHSKKR 419
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++E A+ +Y EM++KG++P+V+ Y + + ++ AF+L EM G++++ T
Sbjct: 420 KMEIAMGIYMEMVAKGVEPNVLTYTAMIHGHAKFGDLDAAFRLHKEMAEKGISSNAITVS 479
Query: 360 TFIDGLCKNSYIVEAV 375
+DGLC+ S + +AV
Sbjct: 480 VLVDGLCRESRVQDAV 495
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 174/394 (44%), Gaps = 30/394 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ + L + LF + TG+ P+LYTYN L++ CK V+ +
Sbjct: 193 PNVVTYSTMICVLCEEGCVIEAERLFIMMKETGVQPNLYTYNALMSSHCKRDGVNRTLTL 252
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+L+S PNAV T+LI G +RI + F ++ +G P V YN+LI+G +R
Sbjct: 253 YQELLKSGLVPNAVIITTLIGGFFLANRISDVKNAFLEMHRYGIAPTVPVYNSLIDGAFR 312
Query: 135 TGHTIVALNLFEEMASGN---GEFGVE---------GFVDKAKELFLQMKDENINPDVVT 182
+G+ AL ++++M EF G V A M+ IN +
Sbjct: 313 SGYAQEALTVYQDMTRVGLCPDEFTCSIIVRGLCCGGQVQVATRFLELMQQSGINLNAAA 372
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I C + EA M + G++PNVVT++ ++D K KM+ A + M+
Sbjct: 373 YNALIDEHCKDGNLAEALATCTRMNEVGIEPNVVTYSSLIDGHSKKRKMEIAMGIYMEMV 432
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
GV PN Y ++ G G ++ A L M G + + S+L++G C+ ++
Sbjct: 433 AKGVEPNVLTYTAMIHGHAKFGDLDAAFRLHKEMAEKGISSNAITVSVLVDGLCRESRVQ 492
Query: 303 GALSLYGEMLSKGIKPDV------------------VIYNTLFVVLFEIHQVERAFKLFD 344
A+ + + D+ V Y TL L+ Q A K F
Sbjct: 493 DAVMFIMKYAGQKKPGDINSFCSNYTTEEDCSILNSVTYMTLIYGLYIDGQYHEAGKFFS 552
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
M+ + D++TY I G C Y++ A+ L+
Sbjct: 553 CMRESDMVPDSFTYSLLIRGQCMLGYVLNAMMLY 586
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 113/237 (47%)
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
D+ +LF +M + P +VTY +++ + D +A + +M+ + + PNVVT++ +
Sbjct: 142 DRVWKLFDEMLSRGMVPSLVTYNTLVNACRHEGDMTKAWEVWNQMVARRIDPNVVTYSTM 201
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
+ LC+ G + EA RL +M + GV+PN + YN LM C VNR L+ + G
Sbjct: 202 ICVLCEEGCVIEAERLFIMMKETGVQPNLYTYNALMSSHCKRDGVNRTLTLYQELLKSGL 261
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
+ LI G+ I + + EM GI P V +YN+L F + A
Sbjct: 262 VPNAVIITTLIGGFFLANRISDVKNAFLEMHRYGIAPTVPVYNSLIDGAFRSGYAQEALT 321
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
++ +M R G+ D +T + GLC + A ++ L+ AYN LID
Sbjct: 322 VYQDMTRVGLCPDEFTCSIIVRGLCCGGQVQVATRFLELMQQSGINLNAAAYNALID 378
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 113/223 (50%), Gaps = 3/223 (1%)
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
G D A +F ++ P + +++ G A ++ L EM+ +G+ P++VT+
Sbjct: 107 GLHDDALSVFCRLPTL---PALPACNAILDGLVKARRFDRVWKLFDEMLSRGMVPSLVTY 163
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
N +++ G M +A + + M+ + PN Y+T++ C G V A+ LF+ M+
Sbjct: 164 NTLVNACRHEGDMTKAWEVWNQMVARRIDPNVVTYSTMICVLCEEGCVIEAERLFIMMKE 223
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
G +++Y+ L++ +CK + L+LY E+L G+ P+ VI TL F +++
Sbjct: 224 TGVQPNLYTYNALMSSHCKRDGVNRTLTLYQELLKSGLVPNAVIITTLIGGFFLANRISD 283
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
F EM R G+A Y + IDG ++ Y EA+ +++ +
Sbjct: 284 VKNAFLEMHRYGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDM 326
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 107/240 (44%), Gaps = 30/240 (12%)
Query: 43 LNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 102
+ +G+ + YN LI+ CK G ++ R+ PN VT++SLI G + +
Sbjct: 361 MQQSGINLNAAAYNALIDEHCKDGNLAEALATCTRMNEVGIEPNVVTYSSLIDGHSKKRK 420
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA----SGNG---EF 155
+ A ++ ++ G EPNV TY +I+G + G A L +EMA S N
Sbjct: 421 MEIAMGIYMEMVAKGVEPNVLTYTAMIHGHAKFGDLDAAFRLHKEMAEKGISSNAITVSV 480
Query: 156 GVEGFVDKAKE----LFL-----QMKDENINP--------------DVVTYTSVIRGFCY 192
V+G +++ +F+ Q K +IN + VTY ++I G
Sbjct: 481 LVDGLCRESRVQDAVMFIMKYAGQKKPGDINSFCSNYTTEEDCSILNSVTYMTLIYGLYI 540
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
++EA M + + P+ T+++++ C G + A L M++IGV+P +
Sbjct: 541 DGQYHEAGKFFSCMRESDMVPDSFTYSLLIRGQCMLGYVLNAMMLYADMVKIGVKPRRYA 600
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 5/199 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ L +K + + + ++ + + G+ P++ TY +I+ K G + F +
Sbjct: 403 PNVVTYSSLIDGHSKKRKMEIAMGIYMEMVAKGVEPNVLTYTAMIHGHAKFGDLDAAFRL 462
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + NA+T + L+ GLC ESR+ +A K + + N+ + Y
Sbjct: 463 HKEMAEKGISSNAITVSVLVDGLCRESRVQDAVMFIMK---YAGQKKPGDINSFCSN-YT 518
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
T LN M G + ++G +A + F M++ ++ PD TY+ +IRG C
Sbjct: 519 TEEDCSILNSVTYMTLIYGLY-IDGQYHEAGKFFSCMRESDMVPDSFTYSLLIRGQCMLG 577
Query: 195 DWNEAKCLLIEMMDQGVQP 213
A L +M+ GV+P
Sbjct: 578 YVLNAMMLYADMVKIGVKP 596
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 3/164 (1%)
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
V++ L + G D+A L + ++ P N ++DG R +R +LF M
Sbjct: 96 LGVLVIALSQMGLHDDA---LSVFCRLPTLPALPACNAILDGLVKARRFDRVWKLFDEML 152
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
S G ++ +Y+ L+N ++ A ++ +M+++ I P+VV Y+T+ VL E V
Sbjct: 153 SRGMVPSLVTYNTLVNACRHEGDMTKAWEVWNQMVARRIDPNVVTYSTMICVLCEEGCVI 212
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
A +LF M+ GV + +TY + CK + + L++ L
Sbjct: 213 EAERLFIMMKETGVQPNLYTYNALMSSHCKRDGVNRTLTLYQEL 256
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 191/398 (47%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S+N + L K +D V L + G P++ T+N LI C+ G
Sbjct: 211 PDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEA 270
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ TP+ + ++I G+C + A + +++ +G +PNV YNT++ GL
Sbjct: 271 LSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCS 330
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
A +L EM + F G VD+ EL QM + PDV+T
Sbjct: 331 AERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVIT 390
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+VI GFC +EA LL M G +PN +++ +++ LC+ + +A L+ MI
Sbjct: 391 YTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMI 450
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q G PN +NTL++ C G V +A EL M GC+ + SYS +I+G K + E
Sbjct: 451 QQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTE 510
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL L M++KGI P+ +IY+++ L + ++ ++FD +Q V +D Y I
Sbjct: 511 EALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVI 570
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LCK A++ F + C + Y LI GL
Sbjct: 571 SSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGL 608
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 179/361 (49%), Gaps = 23/361 (6%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
N++ + + D + L ++L S G PD+ +YN ++ C R ++ ++R
Sbjct: 182 NLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVR 241
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
PN TF +LI LC + +++ GC P++ Y T+I+G+ + GH V
Sbjct: 242 VGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEV 301
Query: 141 ALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
A ++ M S +G + P+VV Y +V++G C A W EA+
Sbjct: 302 ANDILSRMPS----YG-------------------LKPNVVCYNTVLKGLCSAERWEEAE 338
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
LL EM + + VTFN+++D C+NG +D LL+ M++ G P+ Y T+++GF
Sbjct: 339 DLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGF 398
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
C G V+ A L +M + GC SY+I++ G C+ + A L M+ +G P+
Sbjct: 399 CKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNP 458
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
V +NTL + + VE+A +L +M +G + D +Y T IDGL K EA+EL
Sbjct: 459 VTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 518
Query: 381 L 381
+
Sbjct: 519 M 519
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 175/381 (45%), Gaps = 14/381 (3%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP V +FN L L +N ++ V ++ G PDL Y +I+ CK G
Sbjct: 245 PPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVAND 304
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L R+ PN V + +++KGLC+ R EA L ++ C + T+N L++
Sbjct: 305 ILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFC 364
Query: 134 RTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDV 180
+ G + L E+M NG F EG VD+A L M P+
Sbjct: 365 QNGLVDRVIELLEQMLEHGCIPDVITYTTVING-FCKEGLVDEAVMLLKNMSACGCKPNT 423
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
++YT V++G C A W +A+ L+ M+ QG PN VTFN +++ +CK G +++A LL
Sbjct: 424 ISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQ 483
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M+ G P+ Y+T++DG G+ A EL M + G T YS + + +
Sbjct: 484 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGR 543
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ + ++ + ++ D +YN + L + + +RA F M +G + TY
Sbjct: 544 TDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTI 603
Query: 361 FIDGLCKNSYIVEAVELFRTL 381
I GL + EA +L L
Sbjct: 604 LIRGLASEGLVREAQDLLSEL 624
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 176/372 (47%), Gaps = 15/372 (4%)
Query: 41 KRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 100
+ L++ G + YN +I +C+ G+V+ + + PNA T+ +++ LCA
Sbjct: 65 RALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP---VPPNAYTYFPIVRSLCAR 121
Query: 101 SRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG---HTIVALNLFEE----MASGNG 153
I +A + ++ + GC + ++ R G + AL + + SGN
Sbjct: 122 GLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNC 181
Query: 154 EFGV-----EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD 208
V +G VD+ EL ++ PD+V+Y +V++G C A W++ + L++EM+
Sbjct: 182 NLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVR 241
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
G PNV TFN ++ LC+NG ++ L M + G P+ +Y T++DG C G
Sbjct: 242 VGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEV 301
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
A ++ M S G V Y+ ++ G C + E A L EM + D V +N L
Sbjct: 302 ANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVD 361
Query: 329 VLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
+ V+R +L ++M G D TY T I+G CK + EAV L + + C+
Sbjct: 362 FFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKP 421
Query: 389 DIRAYNCLIDGL 400
+ +Y ++ GL
Sbjct: 422 NTISYTIVLKGL 433
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 146/296 (49%), Gaps = 23/296 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+FNIL +N D V+ L +++ G PD+ TY +IN FCK G V ++L +
Sbjct: 355 TFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNM 414
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PN +++T ++KGLC R ++A L + + GC PN T+NTLIN + +
Sbjct: 415 SACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCK---- 470
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+G V++A EL QM +PD+++Y++VI G A E
Sbjct: 471 -------------------KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 511
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A LL M+++G+ PN + ++ + L + G+ D+ ++ D + VR +A +YN ++
Sbjct: 512 ALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVIS 571
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
C +RA + F M S GC +Y+ILI G + A L E+ S+
Sbjct: 572 SLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSR 627
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 36/183 (19%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ +M+ P PV +FN L + K + + L K++ G PDL +Y+ +I+
Sbjct: 445 LISHMIQQGCLPNPV-TFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 503
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR---------------IMEAA 107
K G+ +L ++ TPN + ++S+ L E R + A
Sbjct: 504 GKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDA 563
Query: 108 ALFTKL-----------RVF---------GCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
AL+ + R GC PN TY LI GL G A +L E
Sbjct: 564 ALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSE 623
Query: 148 MAS 150
+ S
Sbjct: 624 LCS 626
>gi|224128023|ref|XP_002329235.1| predicted protein [Populus trichocarpa]
gi|222871016|gb|EEF08147.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 198/391 (50%), Gaps = 37/391 (9%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F++ML+ +P P + +L + ++YD V+SL + + GL P+ YT NILINCFC
Sbjct: 72 FNHMLHRKPLPCIIQFTKLLSAIVKMRQYYDAVISLSRPMELAGLSPNTYTLNILINCFC 131
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K+ V GF VL ++++ P+ V FT+LI GLC + +A LF + G
Sbjct: 132 KLQHVDLGFSVLAKVIKLGLQPDVVPFTTLINGLCKVGKFSQAVELFDETVERG------ 185
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQM 171
YN+LI+GL A + EM S N F EG V +A+ + M
Sbjct: 186 -YNSLIHGLCNCSQWKEASAILNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEAQGVLKTM 244
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ ++ DVVTY S++ G + EA+ L M+ +G +PNV ++N++++ CK +
Sbjct: 245 TEMSVELDVVTYNSLMYGHSLWMEVVEARKLFGFMITKGCKPNVFSYNILINGYCKAEMI 304
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
DEA +L + MI G+ PN YNT GFC G++ A+EL +M + G + +YSIL
Sbjct: 305 DEAKQLFNEMIHQGLTPNIVSYNT--HGFCQLGKLREAQELNENMHTNGNLPDLCTYSIL 362
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
++G+CK A L+ E+ +G++ ++ A + F +M+ DG
Sbjct: 363 LDGFCKQGNHIAARKLFSELFVQGLQ----------------RLLDEALETFRKMEEDGC 406
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
+ W+Y I G ++ AV+L +R
Sbjct: 407 PPNEWSYNVIIRGFLRHRDESRAVQLIGEMR 437
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 170/352 (48%), Gaps = 33/352 (9%)
Query: 31 KHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR-SCFTPNAVT 89
++ D L+ F + P + + L++ KM + + L R + + +PN T
Sbjct: 63 RNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMRQYYDAVISLSRPMELAGLSPNTYT 122
Query: 90 FTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
LI C + ++ K+ G +P+V + TLINGL + G A+ LF+E
Sbjct: 123 LNILINCFCKLQHVDLGFSVLAKVIKLGLQPDVVPFTTLINGLCKVGKFSQAVELFDET- 181
Query: 150 SGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
V++ Y S+I G C + W EA +L EM
Sbjct: 182 -----------VERG------------------YNSLIHGLCNCSQWKEASAILNEMTSL 212
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
+ P++VTFNV++D CK GK+ EA +L M ++ V + YN+LM G L V A
Sbjct: 213 NIMPDIVTFNVLVDTFCKEGKVSEAQGVLKTMTEMSVELDVVTYNSLMYGHSLWMEVVEA 272
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
++LF M + GC VFSY+ILINGYCK + I+ A L+ EM+ +G+ P++V YNT
Sbjct: 273 RKLFGFMITKGCKPNVFSYNILINGYCKAEMIDEAKQLFNEMIHQGLTPNIVSYNTHGFC 332
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
++ ++ A +L + M +G D TY +DG CK + A +LF L
Sbjct: 333 --QLGKLREAQELNENMHTNGNLPDLCTYSILLDGFCKQGNHIAARKLFSEL 382
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 114/240 (47%), Gaps = 8/240 (3%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD-QGVQPNVVTFN 219
+D A F M P ++ +T ++ + +A L M+ G+ PN T N
Sbjct: 65 IDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMRQYYDAVISLSRPMELAGLSPNTYTLN 124
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
++++ CK +D +L +I++G++P+ + TL++G C G+ ++A ELF
Sbjct: 125 ILINCFCKLQHVDLGFSVLAKVIKLGLQPDVVPFTTLINGLCKVGKFSQAVELFDETVER 184
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G Y+ LI+G C + + A ++ EM S I PD+V +N L + +V A
Sbjct: 185 G-------YNSLIHGLCNCSQWKEASAILNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEA 237
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ M V D TY + + G +VEA +LF + C+ ++ +YN LI+G
Sbjct: 238 QGVLKTMTEMSVELDVVTYNSLMYGHSLWMEVVEARKLFGFMITKGCKPNVFSYNILING 297
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 195/394 (49%), Gaps = 15/394 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ L L K TV+ + ++ GL P+L YN +IN CK G V ++ ++
Sbjct: 195 TYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKV 254
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+S P+ T+TS+I G C + A +F ++ GCEPN TY+TLINGL +G
Sbjct: 255 FKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRV 314
Query: 139 IVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSV 186
AL+ EM V F ++ A ++F+ MK + P+V TYTS+
Sbjct: 315 NEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSL 374
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G + A L M GV PN VT+N +M+ L +N ++D A + ++M + G
Sbjct: 375 ISGQRVS---RMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGC 431
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
PN YN L+ G+C G +A + +M T T+ +Y+I+I GYC + + + A+
Sbjct: 432 LPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIR 491
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
+ M + G +PD Y L +I ++E A +F+EM G+ + TY I G C
Sbjct: 492 VLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYC 551
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
K+ + A + ++ C +++ YN LI GL
Sbjct: 552 KDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGL 585
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 190/384 (49%), Gaps = 15/384 (3%)
Query: 29 KNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 88
+N+ D+ +F R++ G P+ TY+ LIN C GRV+ + + R P
Sbjct: 275 RNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVH 334
Query: 89 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM 148
TFT+ I LC RI +A +F ++ GC+PNV+TY +LI+G R +A+ LF M
Sbjct: 335 TFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG-QRVSR--MAIGLFHRM 391
Query: 149 ASG---------NGEFGV--EGF-VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+ N V E +D A +F M P+ +Y +IRG+C D
Sbjct: 392 SRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDT 451
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+A +L M+ P +VT+N+I+ C +G D A R+L+LM G +P+ + Y L
Sbjct: 452 EKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTEL 511
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ GFC ++ A +F M G +Y+ LI+GYCK+++++ A + M G
Sbjct: 512 ISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGC 571
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+P+V YN L L + + A +L M + ++ D TY T I+GLC N I A+E
Sbjct: 572 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALE 631
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
+F + C ++ Y+ LI L
Sbjct: 632 MFNKMVKHGCLPNLHTYSSLIQAL 655
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 186/398 (46%), Gaps = 15/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +F L + +F + G P++YTY LI+ ++ R++ G +
Sbjct: 331 PTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQ-RVSRMAIG--L 387
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R+ R PN VT+ +L+ L I A +F + GC PN +YN LI G
Sbjct: 388 FHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCT 447
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
G T A+++ M G + G D A + MK PD +
Sbjct: 448 IGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWS 507
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT +I GFC + A + EMMD+G+ PN VT+ ++ CK+ K+D A+R+L+ M
Sbjct: 508 YTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMK 567
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G RPN YN L+ G + A+EL M + V +YS +ING C N I
Sbjct: 568 RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIP 627
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL ++ +M+ G P++ Y++L L + +VE A ++F E+++ G+ D TY I
Sbjct: 628 LALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMI 687
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + + A + + C+ ++ Y+ LI GL
Sbjct: 688 EVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL 725
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 194/414 (46%), Gaps = 48/414 (11%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
ML RP+P V ++NI+ + D + + + + + G PD ++Y LI+ FCK+
Sbjct: 461 MLKGRPTPTLV-TYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKIS 519
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
++ + ++ PN VT+T+LI G C + ++ AA + +++ GC PNV TYN
Sbjct: 520 KMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYN 579
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
LI+GL + + A+EL M +E I+PDVVTY++V
Sbjct: 580 VLIHGLTKQNN-----------------------FSGAEELCKVMLEEKISPDVVTYSTV 616
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G C A + +M+ G PN+ T++ ++ L + G+++EA + + + G+
Sbjct: 617 INGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGL 676
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+ Y +++ ++G+V+RA + M + GC T+ +Y +LI G +N+ + L
Sbjct: 677 IPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL-QNEMVYHKLV 735
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVL--------FEIHQ---------VERAFKLFD----- 344
S D +I + VL FE+ + + R+ + F+
Sbjct: 736 ALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLY 795
Query: 345 -EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
M + TY+ F+ L + + A+++F+ + +CEL + Y LI
Sbjct: 796 RSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELI 849
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 148/326 (45%), Gaps = 30/326 (9%)
Query: 77 RILRSCFTPNAV--TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R+L S P AV +IK ++ + +A G + +FTY TL+ L +
Sbjct: 146 RLLESRDRPAAVGRARIHMIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNK 205
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
T ++ + Q+ E + P+++ Y SVI C
Sbjct: 206 LNMTSTVMDRYH-----------------------QILREGLQPNLLIYNSVINALCKDG 242
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ +A+ ++ ++ G++P+ T+ ++ C+N +D A + + M + G PNA Y+
Sbjct: 243 NVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYS 302
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL++G C +GRVN A + M G TV +++ I C IE A ++ +M K
Sbjct: 303 TLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKK 362
Query: 315 GIKPDVVIYNTLFVVLFEIHQVER-AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
G KP+V Y + L +V R A LF M RDGV +T TY ++ L +N I
Sbjct: 363 GCKPNVYTYTS----LISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDS 418
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
A+ +F + C + +YN LI G
Sbjct: 419 ALIVFNMMGKHGCLPNTSSYNELIRG 444
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 103/261 (39%), Gaps = 34/261 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +++ L L + + +F L GL PD TY +I G+V F
Sbjct: 643 PNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDF 702
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAE-------------------SRIMEA---AALFTK 112
LG ++ + P T+ LIKGL E +I+ + L +K
Sbjct: 703 LGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSK 762
Query: 113 LRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------ 160
L E + Y+ L++ L R+G A NL+ M S + + +
Sbjct: 763 LAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALK 822
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
VD A ++F M D+ + Y +I C + EA+ + +M+ + + + + + +
Sbjct: 823 VDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTI 882
Query: 221 IMDELCKNGKMDEASRLLDLM 241
+++ L G D L +M
Sbjct: 883 LINGLLGAGYKDLCMEFLHIM 903
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 193/398 (48%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ L KN + D +F R+ G P+ TY+ LIN C GR+ +
Sbjct: 235 PDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDM 294
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P +T I LC R EA L K++ GC PNV TY LI+GL R
Sbjct: 295 LEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSR 354
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G VA+ ++ +M + + VEG + A +F M + P+ T
Sbjct: 355 DGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTET 414
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I+GFC +A + +M+ G PNV+T+N+I+ K G M+ A RLL++M
Sbjct: 415 YNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMK 474
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G++ + + Y L+ GF G++ A LF M G + V +Y+ +INGY +++
Sbjct: 475 GNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVD 534
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL+L+ +M+ G P YN + + +++ A +M + G+ + TY +FI
Sbjct: 535 DALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFI 594
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
DGLCKN A ++F ++ ++ Y+ LIDGL
Sbjct: 595 DGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGL 632
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 187/390 (47%), Gaps = 28/390 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IFD ML PSP V ++NI+ K + + + L + + GL D +TY LI+ F
Sbjct: 434 IFDQMLKAGPSPN-VITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGF 492
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
+ G++ H F + ++ +PN VT+ ++I G +++ +A ALF K+ G P+
Sbjct: 493 SRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSS 552
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TYN +I+G +T + +A+ +M + + P+V+T
Sbjct: 553 GTYNMMISGFSKTNR-----------------------ISEAENFCGKMVKQGLLPNVIT 589
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YTS I G C + A + EM + PN+ T++ ++D LC+ G+ ++A RLLD
Sbjct: 590 YTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLD--- 646
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G PN Y TL+ G C GR A +L SM+ G + Y L+ G CKN E+E
Sbjct: 647 -DGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVE 705
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL ++ M++ G +P + Y L L + + ++A +F M + +D + +
Sbjct: 706 SALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLL 765
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRA 392
DGL K ++EL + C L+ +
Sbjct: 766 DGLLKEGETDLSLELLHVMESRNCTLNFQT 795
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 196/441 (44%), Gaps = 53/441 (12%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P V ++ L L+++ ++ + ++ ++ + GL P TY+ LIN GR
Sbjct: 333 MKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGR 392
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ +L PN T+ +IKG C+ I +A A+F ++ G PNV TYN
Sbjct: 393 FETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNI 452
Query: 128 LINGLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDE 174
+I+ ++ G+ A+ L E M GNG F G ++ A LF +M +
Sbjct: 453 IIHIYFKQGYMNNAMRLLE-MMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEH 511
Query: 175 NINPDVVTYTSVI-----------------------------------RGFCYANDWNEA 199
I+P+VVTY ++I GF N +EA
Sbjct: 512 GISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEA 571
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
+ +M+ QG+ PNV+T+ +D LCKNG+ A ++ M + PN Y++L+DG
Sbjct: 572 ENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDG 631
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
C G+ A+ L GC V +Y+ L+ G C A L M KG++P
Sbjct: 632 LCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPS 687
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
IY L V + +VE A K+FD M G Y+ I LCK ++ +A +F+
Sbjct: 688 EEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQ 747
Query: 380 TLRILKCELDIRAYNCLIDGL 400
T+ D + L+DGL
Sbjct: 748 TMLKKHWNSDEVVWTVLLDGL 768
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 128/281 (45%), Gaps = 23/281 (8%)
Query: 117 GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI 176
G PN+FT+N +I L G V +A+ + +
Sbjct: 197 GIRPNLFTFNAMIKILCNKGK-----------------------VQEAELIMGHIFHYGA 233
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
PD TYTS+I G C + + A + M+ G PN VT++ +++ LC G+++EA
Sbjct: 234 CPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMD 293
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+L+ MI G+ P Y + C GR A +L M+ GC V +Y+ LI+G
Sbjct: 294 MLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLS 353
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
++ + E A+ +Y +ML+ G+ P V Y+ L L+ + E A +F+ M +T
Sbjct: 354 RDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTE 413
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
TY I G C YI +A +F + ++ YN +I
Sbjct: 414 TYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIII 454
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%)
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M+ G+RPN F +N ++ C G+V A+ + + G F+Y+ LI G+CKN
Sbjct: 193 MLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGN 252
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
++ A ++ M+ G P+ V Y+ L L ++E A + +EM G+ Y
Sbjct: 253 LDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTI 312
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I LC EAV+L ++ C +++ Y LI GL
Sbjct: 313 PIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGL 352
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 65/132 (49%)
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
+++++ M + G +F+++ +I C +++ A + G + G PD Y +L +
Sbjct: 186 GRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLII 245
Query: 329 VLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
+ ++ AF++FD M +DG ++ TY I+GLC + EA+++ + E
Sbjct: 246 GHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEP 305
Query: 389 DIRAYNCLIDGL 400
+ AY I L
Sbjct: 306 TVHAYTIPIVSL 317
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 2/154 (1%)
Query: 15 PPVCSFNILF-GCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P V ++ L G K + Y+ L + + GL P Y L+ CK V
Sbjct: 651 PNVDTYTTLVRGLCGKGRCYEAD-QLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALK 709
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ ++ + F P + +LI LC + +A +F + + + L++GL
Sbjct: 710 IFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLL 769
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKEL 167
+ G T ++L L M S N + V A+EL
Sbjct: 770 KEGETDLSLELLHVMESRNCTLNFQTRVMLAREL 803
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 123/435 (28%), Positives = 205/435 (47%), Gaps = 50/435 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + N + L K + D L +++ G+ P+ TY +I+ + +GR +
Sbjct: 149 PDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKM 208
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ P+ V++ S + LC R EAA +F + G PN+ TY L++G
Sbjct: 209 FREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYAT 268
Query: 135 TGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDVV 181
G ++ F M G+G + G +D+A + +M+ + ++PDV
Sbjct: 269 EGCFADMMSFFNTM-KGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVF 327
Query: 182 TYT-----------------------------------SVIRGFCYANDWNEAKCLLIEM 206
TY+ S+I+GFC D +AK L+ EM
Sbjct: 328 TYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEM 387
Query: 207 MDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M+ G+ +PN+ FN I+ +CK G++ +A + DL+ IG R + ++NTL+DG+CL G
Sbjct: 388 MNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGE 447
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
+ +A + +M S G F+Y+ L+NGY K+ I+ L+L+ EM K IKP V YN
Sbjct: 448 MGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNI 507
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
+ LF + A K+ EM G TY + GLC+N+ EA+ +F+ L +
Sbjct: 508 ILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMN 567
Query: 386 CELDIRAYNCLIDGL 400
+ +I N +I+ +
Sbjct: 568 VKFNITTLNTMINSM 582
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 120/393 (30%), Positives = 190/393 (48%), Gaps = 35/393 (8%)
Query: 10 MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS 69
MR +PP + ++ ++ + + + L+ F RL TGL D N ++ C C R
Sbjct: 1 MRVAPPTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTD 60
Query: 70 HGF-VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-----CEPNVF 123
V+L R+ P+A ++ ++K LC ++R +A L LR+ C P+V
Sbjct: 61 DAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDL---LRMMAKEEGVCSPDVV 117
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFV-------------------DKA 164
TYNT+I+G ++ G A NL+ EM +GFV D A
Sbjct: 118 TYNTVIHGFFKEGKIGKACNLYHEMMQ-------QGFVPDVVTHNSIINALCKARAVDNA 170
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
+ L QM D + P+ VTYTS+I G+ W EA + EM +G+ P++V++N MD
Sbjct: 171 ELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDS 230
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
LCK+G+ EA+ + M G RPN Y L+ G+ G F +M+ G
Sbjct: 231 LCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVAN 290
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
++ILI+ Y K ++ A+ + EM +G+ PDV Y+TL L + ++ A F+
Sbjct: 291 CLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFN 350
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
+M GV +T Y + I G C + +V+A EL
Sbjct: 351 QMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKEL 383
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 184/395 (46%), Gaps = 15/395 (3%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
Y + + P + ++ IL A + ++S F + G+ + + ILI+ + K
Sbjct: 245 YSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKR 304
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
G + ++L + +P+ T+++LI LC R+ +A F ++ G +PN Y
Sbjct: 305 GMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVY 364
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGNG--------------EFGVEGFVDKAKELFLQM 171
++LI G G + A L EM + NG EG V A +F +
Sbjct: 365 HSLIQGFCTHGDLVKAKELVYEMMN-NGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLV 423
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
KD D++ + ++I G+C + +A +L M+ G+ P+ T+N +++ K+G++
Sbjct: 424 KDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRI 483
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
D+ L M ++P YN ++DG GR A+++ M G T ++ +Y+I+
Sbjct: 484 DDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNII 543
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
+ G C+N + A+ ++ ++ + +K ++ NT+ ++ + + E A LF + G+
Sbjct: 544 LKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGL 603
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
+ TY I L K + EA +F ++ C
Sbjct: 604 VPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGC 638
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 171/369 (46%), Gaps = 15/369 (4%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F IL AK D + + + GL PD++TY+ LI+ C+MGR++ +++
Sbjct: 294 FTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMI 353
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC-EPNVFTYNTLINGLYRTGHT 138
+ PN V + SLI+G C +++A L ++ G PN+ +N++++ + + G
Sbjct: 354 GTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRV 413
Query: 139 IVALNLFEEMASGNGE-------------FGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
+ A ++F+ + GE + + G + KA + M I PD TY +
Sbjct: 414 MDAHHIFD-LVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNT 472
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
++ G+ + ++ L EM D+ ++P VT+N+I+D L + G+ A ++L MI G
Sbjct: 473 LVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCG 532
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
+ YN ++ G C + A +F + +M + + + +IN + E A
Sbjct: 533 TTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAK 592
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
L+ + G+ P+ Y + L + VE A +F M++ G A + I L
Sbjct: 593 DLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTL 652
Query: 366 CKNSYIVEA 374
+ IV+A
Sbjct: 653 LEKGEIVKA 661
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 121/279 (43%), Gaps = 13/279 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+++ M N P P + FN + + K +F + G D+ +N LI+ +
Sbjct: 384 VYEMMNNGIPRPN-IAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGY 442
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +G + F VL ++ + P+ T+ +L+ G RI + LF ++ +P
Sbjct: 443 CLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTT 502
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQ 170
TYN +++GL+R G T+ A + EM + + D+A +F +
Sbjct: 503 VTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQK 562
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ N+ ++ T ++I EAK L + D G+ PN T+ +++ L K G
Sbjct: 563 LCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGS 622
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
++EA + M + G P + + N + G + +A
Sbjct: 623 VEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKA 661
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 202/411 (49%), Gaps = 17/411 (4%)
Query: 3 IFDYMLNMRPSP--PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ D + M+ S P + ++ L ++ + +F+ + S G+ P+ Y LI
Sbjct: 430 VKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIK 489
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+ GR +L + + P+ + + S+I GLC ++ EA ++ G +P
Sbjct: 490 GHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKP 549
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEM-------------ASGNGEFGVEGFVDKAKEL 167
NV+TY LI+G ++G VA F+EM A +G + EG +A +
Sbjct: 550 NVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDG-YCKEGSTTEATSI 608
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
F M +++PDV TY+++I G A LL E +++G+ P+V T+N I+ CK
Sbjct: 609 FRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCK 668
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
G + +A +L + M Q G+ PN YN L++G C G + RA+ELF + G H +
Sbjct: 669 QGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVT 728
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y+ +I+GYCK+ + A L+ EM KG+ PD +Y+ L + E+A LF E
Sbjct: 729 YATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESV 788
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
+ G A+ T + +DG CK+ ++EA +L + + D Y LID
Sbjct: 789 QKGFAS-TSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILID 838
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 189/386 (48%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N++ G L + D L K ++ GL D++TY+ILI+ F K R + ++
Sbjct: 269 PSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLM 328
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P V +T+LI G + EA + ++ G + N+FTYN L+ G+ +
Sbjct: 329 LEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCK 388
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G ++KA L +M I PD TY ++I G+
Sbjct: 389 FGD-----------------------MEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQ 425
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ + K LL EM + P T +I++ LC++G +++ASR+ ++M+ +GV+PNA +Y
Sbjct: 426 NTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYT 485
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+ G GR A + M+ G V Y+ +I G CK++++E A EM+ +
Sbjct: 486 TLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIER 545
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+KP+V Y L + +++ A + F EM G+A + IDG CK EA
Sbjct: 546 GLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEA 605
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+FR + D+R Y+ LI GL
Sbjct: 606 TSIFRCMLGRSVHPDVRTYSALIHGL 631
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 189/398 (47%), Gaps = 26/398 (6%)
Query: 5 DYMLN---MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
D +LN M P ++N + K ++ V L + + L P YT ++IN
Sbjct: 396 DALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIING 455
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
C+ G + V ++ PNAV +T+LIKG E R EA + + G +P+
Sbjct: 456 LCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPD 515
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
V YN++I GL ++ +++AK+ ++M + + P+V
Sbjct: 516 VLCYNSVIIGLCKSRK-----------------------MEEAKDYLVEMIERGLKPNVY 552
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY ++I G+C + + A EM+ G+ PN V ++D CK G EA+ + M
Sbjct: 553 TYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCM 612
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ V P+ Y+ L+ G G++ A EL G VF+Y+ +I+G+CK I
Sbjct: 613 LGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGI 672
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A L+ M KGI P+++ YN L L + ++ERA +LFD + G+A + TY T
Sbjct: 673 GKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATI 732
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
IDG CK+ + +A LF + + D Y+ LIDG
Sbjct: 733 IDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDG 770
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 185/412 (44%), Gaps = 22/412 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF ML R P V +++ L L +N + L GL PD++TYN +I+ F
Sbjct: 608 IFRCMLG-RSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGF 666
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G + F + + + +PN +T+ +LI GLC I A LF + G N
Sbjct: 667 CKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNA 726
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV----------------EGFVDKAKE 166
TY T+I+G ++G+ A LF+EM GV EG +KA
Sbjct: 727 VTYATIIDGYCKSGNLSKAFRLFDEMTLK----GVPPDSFVYSALIDGCRKEGNTEKALS 782
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
LFL+ + + +++ GFC + EA LL +M+D+ V+P+ VT+ +++D C
Sbjct: 783 LFLESVQKGF-ASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHC 841
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
K G + EA + M + + PNA Y L+ G+ + GR + LF M +
Sbjct: 842 KTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGV 901
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
++S++I+ + K + L L +ML KG + + L L V K+ +++
Sbjct: 902 TWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKI 961
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
+ G+ T T + K + A + +++ K D N LI+
Sbjct: 962 EEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLIN 1013
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 130/279 (46%), Gaps = 23/279 (8%)
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
+V+TY LIN +R G+ + K L +M+++ +P +
Sbjct: 235 DVYTYTHLINAHFRAGNA-----------------------KEGKRLLFEMEEKGCSPSL 271
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY VI G C A + +EA L M +G+ +V T+++++D K + EA +L+
Sbjct: 272 VTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEE 331
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M G++P Y L+DGF G A + M + G +F+Y+ L+ G CK +
Sbjct: 332 MFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGD 391
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+E A +L EM+ GIKPD YN + + R L EM++ + +T
Sbjct: 392 MEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGM 451
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I+GLC++ I +A +F + L + + Y LI G
Sbjct: 452 IINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKG 490
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 126/241 (52%), Gaps = 8/241 (3%)
Query: 166 ELFLQ----MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
ELF + M + N+ DV TYT +I A + E K LL EM ++G P++VT+NV+
Sbjct: 218 ELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVV 277
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
+ LC+ G++DEA L LM + G+ + F Y+ L+DGF R AK + M S G
Sbjct: 278 IGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGL 337
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
+Y+ LI+G+ + + A + EML++G+K ++ YN L + + +E+A
Sbjct: 338 KPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADA 397
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC--LIDG 399
L +EM G+ DT TY I+G K +L ++ K L AY C +I+G
Sbjct: 398 LLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMK--KSNLVPTAYTCGMIING 455
Query: 400 L 400
L
Sbjct: 456 L 456
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 165/378 (43%), Gaps = 46/378 (12%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + K L + + G+ P++ TYN LIN CK G + +
Sbjct: 654 PDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERAREL 713
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
I NAVT+ ++I G C + +A LF ++ + G P+ F Y+ LI+G +
Sbjct: 714 FDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRK 773
Query: 135 TGHTIVALNL--------FEEMASGNG------------------EFGVE---------- 158
G+T AL+L F +S N E V+
Sbjct: 774 EGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTY 833
Query: 159 ----------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD 208
GF+ +A++ F+ M+ N+ P+ +TYT+++ G+ A +E L EM+
Sbjct: 834 TILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIA 893
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
+ ++P+ VT++V++D K G + +L+D M++ G + V + L+D C V+
Sbjct: 894 KDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSE 953
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
++ +E G ++ + S L+ + K +++GA + M+ PD N L
Sbjct: 954 VLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLIN 1013
Query: 329 VLFEIHQVERAFKLFDEM 346
V + E A +M
Sbjct: 1014 VEQDSTDSENAGDFLKQM 1031
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 106/254 (41%), Gaps = 35/254 (13%)
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
V + +I G+ ++EA + G ++ N ++ +L K K++ R +
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG 226
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M++ V + + Y L++ G K L ME GC+ ++ +Y+++I G C+ E
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286
Query: 301 IEGALSL----------------------YG-------------EMLSKGIKPDVVIYNT 325
++ A L +G EM SKG+KP V Y
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTA 346
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L AF++ +EM GV + +TY + G+CK + +A L + ++
Sbjct: 347 LIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVG 406
Query: 386 CELDIRAYNCLIDG 399
+ D + YN +I+G
Sbjct: 407 IKPDTQTYNNMIEG 420
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 196/385 (50%), Gaps = 23/385 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+N + L ++ ++ +F R+ + G+ PD+YT+ I I FC+ R +
Sbjct: 109 PSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRL 168
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ NAV + +++ G E+ +EA LF + G P+V T+N L++ L +
Sbjct: 169 LNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCK 228
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G V +++ L ++ + + ++ T+ I+G C
Sbjct: 229 KGE-----------------------VQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKG 265
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ A +L ++ +G+ P+VVT+N ++ LCKN + EA + L ++ G+ P+ F YN
Sbjct: 266 MLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYN 325
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+DG+C G + A+++ G F+Y LING C+N EI+ AL+L+ L K
Sbjct: 326 TLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGK 385
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+KP V++YN L L + + +A ++ +EM +G ++D WTY I+GLCK + +A
Sbjct: 386 GLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDA 445
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
L D+ +N LIDG
Sbjct: 446 NNLMNDAIAKGYVPDVFTFNTLIDG 470
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 196/398 (49%), Gaps = 13/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FN L L K L ++ G+ +L+T+NI I C+ G +S +
Sbjct: 214 PDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSM 273
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++R TP+ VT+ +LI GLC S ++EA KL G EP+ FTYNTLI+G +
Sbjct: 274 LDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCK 333
Query: 135 TGHTIVALNLFE-EMASG--NGEFG----VEGF-----VDKAKELFLQMKDENINPDVVT 182
G A + + + G EF + G +D+A LF + + P V+
Sbjct: 334 MGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVIL 393
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I+G C +A ++ EM + G ++ T+N++++ LCK G + +A+ L++ I
Sbjct: 394 YNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAI 453
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G P+ F +NTL+DG+C ++ ++ M S G T V +Y+ ++NG K + E
Sbjct: 454 AKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNE 513
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
+ + M+ KG P+ + YN L L + +V A L DE+ G+ DT ++ T I
Sbjct: 514 DLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATII 573
Query: 363 DGLCKNSYIVEAVELFRTL-RILKCELDIRAYNCLIDG 399
G N + A +LFR + K YN +I+
Sbjct: 574 SGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINA 611
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 177/423 (41%), Gaps = 83/423 (19%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L KN + +L + GL PD +TYN LI+ +CKMG + + +
Sbjct: 284 PDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKI 343
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + F P+ T+ SLI GLC I A ALF G +P V YN LI GL +
Sbjct: 344 LQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQ 403
Query: 135 TGHTIVALNLFEEMASG-------------NG--EFG----------------------- 156
G + AL + EM+ NG + G
Sbjct: 404 EGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFT 463
Query: 157 ----VEGFVDKAK-----ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
++G+ + K ++ +M + PDV+TY SV+ G A + M+
Sbjct: 464 FNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMV 523
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
++G PN +T+N++ + LCK GK++EA L+D ++ G+ P+ + T++ GF G +
Sbjct: 524 EKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLK 583
Query: 268 RA------------------------------------KELFVSMESMGCTHTVFSYSIL 291
A ++LF+ M + GC ++Y ++
Sbjct: 584 GAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVM 643
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I+G+C + EM+ KG P + + + L H+V A + M +G+
Sbjct: 644 IDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGI 703
Query: 352 AAD 354
+
Sbjct: 704 VPE 706
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 146/320 (45%), Gaps = 13/320 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N+L L + L + ++ G D++TYN++IN CKMG VS +
Sbjct: 389 PTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNL 448
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + + P+ TF +LI G C + ++ + K+ G P+V TYN+++NGL +
Sbjct: 449 MNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSK 508
Query: 135 TGHTIVALNLFEEMASG------------NGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+ FE M G V++A +L ++ ++ I PD V+
Sbjct: 509 AVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVS 568
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+ ++I GF D A L M +Q V T+N++++ + + +L M
Sbjct: 569 FATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEM 628
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
G P+ + Y ++DGFC+TG + + + M G ++ ++ +IN C +
Sbjct: 629 GAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRV 688
Query: 302 EGALSLYGEMLSKGIKPDVV 321
A+ + M+ GI P+VV
Sbjct: 689 HEAVDIIHFMVHNGIVPEVV 708
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 135/310 (43%), Gaps = 58/310 (18%)
Query: 90 FTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
+ +K + ++ EA +F ++ + CEP+V +YN ++N L +G
Sbjct: 79 YIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESG------------- 125
Query: 150 SGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
+ +A ++FL+MK+ I PDV T+T I+ FC + A LL M+ Q
Sbjct: 126 ----------YFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQ 175
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
G Q N V + ++ + EA L + M++IG+ P+ +N L+ C G V +
Sbjct: 176 GCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQES 235
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
+ L + G +F+++I I G C+ + GA+S+
Sbjct: 236 ERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSM---------------------- 273
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
D + R+G+ D TY T I GLCKNS +VEA + L E D
Sbjct: 274 -------------LDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPD 320
Query: 390 IRAYNCLIDG 399
YN LIDG
Sbjct: 321 GFTYNTLIDG 330
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 131/293 (44%), Gaps = 18/293 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FN L K +T + + ++ S G+ PD+ TYN ++N K +
Sbjct: 459 PDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMET 518
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ PN +T+ L + LC ++ EA L ++ G P+ ++ T+I+G
Sbjct: 519 FETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFAN 578
Query: 135 TGHTIVALNLFEEMA--------SGNGEFGVEGFVDK-----AKELFLQMKDENINPDVV 181
G A LF M + + F +K ++LFL+M PD
Sbjct: 579 NGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTY 638
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY +I GFC + + L+EM+++G P++ TF +++ LC ++ EA ++ M
Sbjct: 639 TYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFM 698
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+ G+ P V N++ + +V A ++ V T ++Y +L +G
Sbjct: 699 VHNGIVPE--VVNSISEA---DKKVVAAPKIVVEDLLKRSCITYYAYELLYDG 746
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%)
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
VY M + G+V A ++F M+ C +V SY+ ++N ++ + A ++ M
Sbjct: 78 VYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRM 137
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
+ GI PDV + + A +L + M G + Y T + G + +Y
Sbjct: 138 KNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYR 197
Query: 372 VEAVELFRTLRILKCELDIRAYNCLIDGL 400
VEA ELF + + D+ +N L+ L
Sbjct: 198 VEAYELFNDMLRIGIFPDVSTFNKLLHTL 226
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 206/405 (50%), Gaps = 13/405 (3%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
L R P V SFN + CL K + D LSLF+ + P+ TYNI+I+ C GR
Sbjct: 79 LRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAE-PNSSTYNIIIDMLCLGGR 137
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V + +L + + PN +T ++ LC ++ EA +F GC P+ TY +
Sbjct: 138 VEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCS 197
Query: 128 LINGLYRTGHTIVALNLFEEM--ASGNGE----------FGVEGFVDKAKELFLQMKDEN 175
LI+GL + G A LFE+M A N F + G + ++F ++
Sbjct: 198 LIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRG 257
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
PD+ + + A + + + + ++ G P+V ++++++ L K G+ E S
Sbjct: 258 CKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETS 317
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+ M Q G +A YN ++DGFC +G+V++A E+ M+ TV +Y +++G
Sbjct: 318 NIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGL 377
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
K ++ A L+ E SKGI+ +VV+Y++L ++ +++ A+ + +EM + G+ +
Sbjct: 378 AKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNV 437
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+T+ + +D L K I EA+ F++++ +KC + Y+ LI+GL
Sbjct: 438 YTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGL 482
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 191/409 (46%), Gaps = 47/409 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + NI+ L K + + +F+ + G PD TY LI+ K G+V + +
Sbjct: 155 PNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRL 214
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL--------------------- 113
++L + N V +TSLI+ R + +F +L
Sbjct: 215 FEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFK 274
Query: 114 --------------RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG--- 156
R +G P+V +Y+ LI+GL + G N+F M
Sbjct: 275 AGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARA 334
Query: 157 ----VEGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
V+GF V KA E+ +MK++ + P V TY +++ G + +EA L E
Sbjct: 335 YNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK 394
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+G++ NVV ++ ++D K G++DEA +L+ M++ G+ PN + +N+L+D +N
Sbjct: 395 SKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEIN 454
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A F SM+ M C ++YSILING C+ ++ A + +M +G+ P+VV Y T+
Sbjct: 455 EALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMI 514
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
L ++ + A+ LF+ + +G D ++ I+G+ + +EA +
Sbjct: 515 SGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 563
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 167/362 (46%), Gaps = 24/362 (6%)
Query: 38 SLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 97
F L + GL PD +Y +I CK GR+ + ++ P A + ++I G
Sbjct: 4 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 63
Query: 98 CAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV 157
+ R +A L +LR GC P+V ++N+++ L + AL+LFE M
Sbjct: 64 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM--------- 114
Query: 158 EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
++ P+ TY +I C EA +L EM + PN++T
Sbjct: 115 ---------------KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLT 159
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
N+++D LCK K++EA ++ + Q G P+ Y +L+DG G+V+ A LF M
Sbjct: 160 VNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKML 219
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
G Y+ LI + + E ++ E++ +G KPD+ + NT +F+ +VE
Sbjct: 220 DAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVE 279
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ +F++++ G D +Y I GL K E +F ++ LD RAYN ++
Sbjct: 280 KGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVV 339
Query: 398 DG 399
DG
Sbjct: 340 DG 341
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 104/196 (53%), Gaps = 1/196 (0%)
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
E+ QG++P+ V++ ++ LCK G++ EA L M P A+ YNT++ G+ G
Sbjct: 8 ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAG 67
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
R A +L + GC +V S++ ++ K ++++ ALSL+ E++ K +P+ YN
Sbjct: 68 RFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYN 126
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
+ +L +VE A+++ DEM+ + + T +D LCK + EA ++F +
Sbjct: 127 IIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQR 186
Query: 385 KCELDIRAYNCLIDGL 400
C D Y LIDGL
Sbjct: 187 GCNPDCVTYCSLIDGL 202
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 123/270 (45%), Gaps = 36/270 (13%)
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM----------------- 206
A + F ++K + + PD V+YTS+I C A EA+ L +M
Sbjct: 2 AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61
Query: 207 ------------------MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
++G P+VV+FN I+ L K K+DEA L ++M + P
Sbjct: 62 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEP 120
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
N+ YN ++D CL GRV A + ME + + +I+++ CK +++E A ++
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
+G PD V Y +L L + QV+ A++LF++M G A+ Y + I +
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 240
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLID 398
+ ++F+ L C+ D+ N +D
Sbjct: 241 GRKEDGHKIFKELIRRGCKPDLTLLNTYMD 270
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 1/132 (0%)
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
A + F +++ G SY+ +I CK + A L+ +M ++ P YNT+ +
Sbjct: 2 AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61
Query: 329 VLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
+ E A+KL + ++ G ++ + + L K + EA+ LF ++ E
Sbjct: 62 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEP 120
Query: 389 DIRAYNCLIDGL 400
+ YN +ID L
Sbjct: 121 NSSTYNIIIDML 132
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 128/399 (32%), Positives = 189/399 (47%), Gaps = 17/399 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + L L+K D L L + + G PD+ T+N +I FC++ RV G +
Sbjct: 243 PNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKL 302
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R++ FTPN +T+ L+ GLC RI EA AL +K+ PNV +NTL+NG R
Sbjct: 303 VDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVP----GPNVVHFNTLVNGFVR 358
Query: 135 TGHTIVALNLFEEMASGNG------EFGV-------EGFVDKAKELFLQMKDENINPDVV 181
G A + NG F +G A EL M + P++
Sbjct: 359 NGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLN 418
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT +I GFC EA +L EM+ +G N V +N ++ LCK+GK+ EA + M
Sbjct: 419 TYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEM 478
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
G +P+ F +N+L+ G C + A L+ M G +++ LI+ + + EI
Sbjct: 479 SSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEI 538
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ AL L +ML +G D + YN L L + VE+ LF+EM R G+ T
Sbjct: 539 QEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNIL 598
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I+G C + A+E R + DI YN LI+GL
Sbjct: 599 INGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGL 637
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 199/399 (49%), Gaps = 17/399 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S+N++ L ++F + S G+ P+ YT+ +++ C + V + ++
Sbjct: 173 PSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLL 232
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + PN++ + +LI L R+ EA L ++ + GC P+V T+NT+I G R
Sbjct: 233 LRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCR 292
Query: 135 TGHTIVALNLFEEM-----ASGNGEFG--VEGF-----VDKAKELFLQMKDENINPDVVT 182
+ L + M + +G + G +D+A+ L ++ P+VV
Sbjct: 293 LNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVP----GPNVVH 348
Query: 183 YTSVIRGFCYANDWNEAKCLLIE-MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+ +++ GF NEA + + M++ G P+V TF+ +++ LCK G A L++ M
Sbjct: 349 FNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDM 408
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
G +PN Y L+DGFC G++ A + M + G + Y+ LI+ CK+ +I
Sbjct: 409 DAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKI 468
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
AL ++GEM SKG KPD+ +N+L L + ++E A L+ +M +GV A++ T+ T
Sbjct: 469 HEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTL 528
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I + I EA++L + C LD YN LI L
Sbjct: 529 IHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKAL 567
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 186/373 (49%), Gaps = 17/373 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV- 73
P ++ L L K D +L ++ P++ +N L+N F + GR++
Sbjct: 313 PNDMTYGYLMHGLCKTCRIDEAQALLSKVPG----PNVVHFNTLVNGFVRNGRLNEATAF 368
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
V +++ + + P+ TF++L+ GLC + A L + GC+PN+ TY LI+G
Sbjct: 369 VYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFC 428
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVV 181
+ G A + EM + G+ + +A ++F +M + PD+
Sbjct: 429 KKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIF 488
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
T+ S+I G C ++ +A L +M+ +GV N VTFN ++ + G++ EA +L++ M
Sbjct: 489 TFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDM 548
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G + YN L+ C TG V + LF M G T ++ + +ILING+C ++
Sbjct: 549 LFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKV 608
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
AL +M+ +G PD+V YN+L L + +++ A LF+++Q +G+ D+ TY T
Sbjct: 609 HNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTL 668
Query: 362 IDGLCKNSYIVEA 374
I LC+ +A
Sbjct: 669 ICWLCREGAFDDA 681
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 163/336 (48%), Gaps = 13/336 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
++D M+N P V +F+ L L K + + L L +++ G P+L TY ILI+ F
Sbjct: 369 VYDKMIN-NGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGF 427
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G++ ++L +L F+ N V + +LI LC +I EA +F ++ GC+P++
Sbjct: 428 CKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDI 487
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
FT+N+LI GL R AL L+ +M F G + +A +L
Sbjct: 488 FTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVND 547
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M D +TY +I+ C + L EM+ +G+ P+++T N++++ C GK
Sbjct: 548 MLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGK 607
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ A + MI G P+ YN+L++G C GR+ A LF +++ G +Y+
Sbjct: 608 VHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNT 667
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
LI C+ + A L + G P+ V +N L
Sbjct: 668 LICWLCREGAFDDACFLLYRGVENGFVPNDVTWNIL 703
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 98/216 (45%), Gaps = 5/216 (2%)
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV---QPNVVTFNVIM 222
L LQMK+E I + +++ + A +A LL++M +GV +P+ ++NV++
Sbjct: 125 RLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDM--KGVYCCEPSFRSYNVVL 182
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
D L AS + M+ GV PN + + +M C+ V+ A L M GC
Sbjct: 183 DVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCV 242
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
Y LI+ K ++ AL L EM G PDV +NT+ +++V KL
Sbjct: 243 PNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKL 302
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
D M G + TY + GLCK I EA L
Sbjct: 303 VDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALL 338
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 206/405 (50%), Gaps = 13/405 (3%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
L R P V SFN + CL K + D LSLF+ + P+ TYNI+I+ C GR
Sbjct: 211 LRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAE-PNSSTYNIIIDMLCLGGR 269
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V + +L + + PN +T ++ LC ++ EA +F GC P+ TY +
Sbjct: 270 VEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCS 329
Query: 128 LINGLYRTGHTIVALNLFEEM--ASGNGE----------FGVEGFVDKAKELFLQMKDEN 175
LI+GL + G A LFE+M A N F + G + ++F ++
Sbjct: 330 LIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRG 389
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
PD+ + + A + + + + ++ G P+V ++++++ L K G+ E S
Sbjct: 390 CKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETS 449
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+ M Q G +A YN ++DGFC +G+V++A E+ M+ TV +Y +++G
Sbjct: 450 NIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGL 509
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
K ++ A L+ E SKGI+ +VV+Y++L ++ +++ A+ + +EM + G+ +
Sbjct: 510 AKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNV 569
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+T+ + +D L K I EA+ F++++ +KC + Y+ LI+GL
Sbjct: 570 YTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGL 614
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 180/392 (45%), Gaps = 13/392 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F L LA+ L+L + + L PD+ YN+ I+CF K G V +
Sbjct: 83 FTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELK 142
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
P+ V++TS+I LC R+ EA LF ++ P + YNT+I G G
Sbjct: 143 AQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFE 202
Query: 140 VALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSVI 187
A L E + V F VD+A LF MK ++ P+ TY +I
Sbjct: 203 DAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNIII 261
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
C EA +L EM + PN++T N+++D LCK K++EA ++ + Q G
Sbjct: 262 DMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCN 321
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P+ Y +L+DG G+V+ A LF M G Y+ LI + + E +
Sbjct: 322 PDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKV 381
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
+ E++ +G KPD+ + NT +F+ +VE+ +F++++ G D +Y I GL K
Sbjct: 382 FKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTK 441
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
E +F ++ LD RAYN ++DG
Sbjct: 442 AGQARETSNIFHAMKQQGFALDARAYNAVVDG 473
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 191/409 (46%), Gaps = 47/409 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + NI+ L K + + +F+ + G PD TY LI+ K G+V + +
Sbjct: 287 PNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRL 346
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN------------- 121
++L + N V +TSLI+ R + +F +L GC+P+
Sbjct: 347 FEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFK 406
Query: 122 ----------------------VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG--- 156
V +Y+ LI+GL + G N+F M
Sbjct: 407 AGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARA 466
Query: 157 ----VEGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
V+GF V KA E+ +MK++ + P V TY +++ G + +EA L E
Sbjct: 467 YNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK 526
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+G++ NVV ++ ++D K G++DEA +L+ M++ G+ PN + +N+L+D +N
Sbjct: 527 SKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEIN 586
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A F SM+ M C ++YSILING C+ ++ A + +M +G+ P+VV Y T+
Sbjct: 587 EALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMI 646
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
L ++ + A+ LF+ + +G D ++ I+G+ + +EA +
Sbjct: 647 SGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 695
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 154/343 (44%), Gaps = 24/343 (6%)
Query: 58 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 117
L + R+ + + + R F P +T LI L R A L +++ G
Sbjct: 16 LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 75
Query: 118 CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENIN 177
E V + TL+ L R G AL L +E+ K +
Sbjct: 76 YEVGVHLFTTLVRALAREGQVADALALVDEV-----------------------KGSCLE 112
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
PD+V Y I F A + + A E+ QG++P+ V++ ++ LCK G++ EA L
Sbjct: 113 PDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEEL 172
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
M P A+ YNT++ G+ GR A +L + GC +V S++ ++ K
Sbjct: 173 FAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGK 232
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
++++ ALSL+ E++ K +P+ YN + +L +VE A+++ DEM+ + + T
Sbjct: 233 KRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLT 291
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+D LCK + EA ++F + C D Y LIDGL
Sbjct: 292 VNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGL 334
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 192/391 (49%), Gaps = 23/391 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + + L + + + PD+ T++ LIN F K G+VS +
Sbjct: 113 PNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEEL 172
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+LR P +T++S+I G C SR+ +A +F + GC P++ T NTLI+G R
Sbjct: 173 YREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCR 232
Query: 135 T-----------GHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQM 171
G+ VA +LF+EM S + G ++KA E+F
Sbjct: 233 AKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVF 292
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ ++ D T +I G C N +EA L + GV+ +VVT+N+++ K G
Sbjct: 293 QKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNF 352
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
A + M+ G+ P+ YN+++DGFC R+ A+++ SM S GC+ V ++S L
Sbjct: 353 LRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTL 412
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I GYCK ++ L L+ EM +G+ D + YN L ++ + A +F+EM GV
Sbjct: 413 IKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGV 472
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
DT T+R+ + GLC + + + + + L+
Sbjct: 473 CPDTITFRSMLAGLCTKAELQKGLTMLEDLQ 503
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 191/364 (52%), Gaps = 34/364 (9%)
Query: 45 STGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 104
TG ++ T+ L+N C+ GRV ++ R++ P+AVT+ +++ G+C +
Sbjct: 3 ETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTV 62
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKA 164
A + K+ + NV Y+ +++ L + G+ I KA
Sbjct: 63 SALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHI-----------------------KA 99
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
+ +F +M ++ I P+V+TY +I G+C W++A+ LL +M+++ + P+VVTF+ +++
Sbjct: 100 QNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINA 159
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
K GK+ A L M++ + P Y++++DGFC R+ AK +F M S GC+
Sbjct: 160 FVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPD 219
Query: 285 VFSYSILINGYCKNKE--IEG---------ALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
+ + + LI+G C+ K I G A L+ EM+S G+ PD+V NTL L E
Sbjct: 220 IITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCEN 279
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
++E+A ++F Q+ + DT T I+G+CK + + EA +LF +L + E D+ Y
Sbjct: 280 GKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTY 339
Query: 394 NCLI 397
N LI
Sbjct: 340 NILI 343
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 194/409 (47%), Gaps = 23/409 (5%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P V +F L L + L+L R+ G PD TY ++N CK+G
Sbjct: 7 PANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALN 66
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L ++ S N V +++++ LC + ++A +FT++ G PNV TYN +I+G
Sbjct: 67 MLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYC 126
Query: 134 RTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
G A L +M N F EG V A+EL+ +M NI P +
Sbjct: 127 SYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTI 186
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN-----------GK 230
TY+S+I GFC + +AK + M+ +G P+++T N ++D C+ G
Sbjct: 187 TYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGN 246
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
++ A L MI GV P+ NTL+ G C G++ +A E+F + + +I
Sbjct: 247 VNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNI 306
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+ING CK +++ A L+ + G++ DVV YN L V + RA ++ EM G
Sbjct: 307 IINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKG 366
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ T TY + +DG CK + + EA ++ ++ C D+ ++ LI G
Sbjct: 367 IIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKG 415
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 176/326 (53%), Gaps = 34/326 (10%)
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
N VTFT+L+ GLC E R+++A AL ++ G +P+ TY T++NG+ + G T+ ALN+
Sbjct: 9 NVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNML 68
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
+M + I +VV Y++++ C + +A+ + E
Sbjct: 69 R-----------------------KMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTE 105
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M ++G+ PNV+T+N ++D C GK +A +LL MI+ + P+ ++ L++ F G+
Sbjct: 106 MHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGK 165
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
V+ A+EL+ M T +YS +I+G+CK+ +E A ++ M+SKG PD++ NT
Sbjct: 166 VSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNT 225
Query: 326 L----------FVVLF-EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
L + F ++ V A LF EM +GV+ D T T + GLC+N + +A
Sbjct: 226 LIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKA 285
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+E+F+ + K +LD N +I+G+
Sbjct: 286 LEMFKVFQKSKMDLDTATCNIIINGM 311
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 156/328 (47%), Gaps = 34/328 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKH----------YDTVLSLFKRLNSTGLFPDL 52
+FD M++ SP + ++ GC +H + LF+ + S G+ PD+
Sbjct: 207 MFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDI 266
Query: 53 YTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 112
T N L+ C+ G++ + +S + T +I G+C +++ EA LF
Sbjct: 267 VTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNS 326
Query: 113 LRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMK 172
L V G E +V TYN LI G F EG +A++++L+M
Sbjct: 327 LPVNGVETDVVTYNILI-----------------------GVFVKEGNFLRAEDIYLEML 363
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 232
+ I P VTY S++ GFC N EA+ ++ M+ +G P+VVTF+ ++ CK G++D
Sbjct: 364 CKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVD 423
Query: 233 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
+ L M Q G+ + YN L+ GFC G +N A+++F M S G ++ ++
Sbjct: 424 DGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSML 483
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDV 320
G C E++ L++ E L K + ++
Sbjct: 484 AGLCTKAELQKGLTML-EDLQKSVDHEL 510
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 106/229 (46%), Gaps = 35/229 (15%)
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M++ G NVVTF +M+ LC+ G++ +A L+D M++ G +P+A Y T+++G C G
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
A + M+ V YS +++ CK+ A +++ EM KGI P+V+ YN
Sbjct: 61 TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120
Query: 326 LF---------------------------VVLFEI--------HQVERAFKLFDEMQRDG 350
+ VV F +V A +L+ EM R
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ T TY + IDG CK+S + +A +F + C DI N LIDG
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDG 229
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%)
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M+ G +VV + TL L +V +A L D M +G D TY T ++G+CK
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
V A+ + R + + + ++ Y+ ++D L
Sbjct: 61 TVSALNMLRKMDESQIKANVVIYSAIVDRL 90
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 193/396 (48%), Gaps = 12/396 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +FNI+ L K + ++G+ P++ TYN +++ +C GRV +L
Sbjct: 221 VYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILT 280
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ R P++ T+ SLI G+C + R+ EA+ +F ++ G P+ YNTLI+G G
Sbjct: 281 TMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKG 340
Query: 137 HTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
+ +A +EM +E D+A+ + +++++ I+PD +TY
Sbjct: 341 NLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYN 400
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+I G+C + +A L EM+ G++P T+ ++ L K +M EA L +
Sbjct: 401 ILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE 460
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
GV P+ ++N L+DG C V A EL M+ M +++ ++ G+C+ ++E A
Sbjct: 461 GVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEA 520
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L+ EM +GIKPD + +NTL ++ AF++ +EM G TY + G
Sbjct: 521 RELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQG 580
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LCKN A EL + + D Y LI+G+
Sbjct: 581 LCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 195/392 (49%), Gaps = 25/392 (6%)
Query: 34 DTVLSLFKRLNSTG----LFPDL---------YTYNILINCFCKMGRVSHGFVVLGRILR 80
+++LSLF +LN T L+ ++ YT+NI+IN CK G++ +G +
Sbjct: 190 NSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMET 249
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
S PN VT+ +++ G C+ R+ A A+ T ++ EP+ FTY +LI+G+ + G
Sbjct: 250 SGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEE 309
Query: 141 ALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
A +FEEM F +G +D A +M + I+P + TY S+I
Sbjct: 310 ASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIH 369
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
+EA+C++ E+ ++G+ P+ +T+N++++ C+ +A L D M+ G++P
Sbjct: 370 ALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKP 429
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
Y +L+ R+ A +LF + S G V ++ LI+G+C N ++GA L
Sbjct: 430 TKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELL 489
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
+M + PD V +NT+ +VE A +LFDEM+R G+ D ++ T I G +
Sbjct: 490 KDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRR 549
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I +A + + + YN L+ GL
Sbjct: 550 GDIKDAFRVRNEMLDTGFNPTVLTYNALVQGL 581
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 175/366 (47%), Gaps = 23/366 (6%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
D F + G+ P + T N L++ F K+ R +V+ + R + TF +
Sbjct: 168 DEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIM 227
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG 153
I LC E ++ +A + G +PN+ TYNT+++G
Sbjct: 228 INVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHG---------------------- 265
Query: 154 EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
+ G V+ A + MK + I PD TY S+I G C EA + EM+ +G++P
Sbjct: 266 -YCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRP 324
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
+ V +N ++D C G +D AS D M++ G+ P YN+L+ + R + A+ +
Sbjct: 325 SAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMI 384
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
++ G + +Y+ILINGYC+ + A L+ EML+ GIKP Y +L VL +
Sbjct: 385 KEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKK 444
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
++++ A LF ++ +GV D + IDG C NS + A EL + + +K D +
Sbjct: 445 NRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTF 504
Query: 394 NCLIDG 399
N ++ G
Sbjct: 505 NTIMQG 510
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 113/235 (48%), Gaps = 28/235 (11%)
Query: 1 FCIFDYML--NMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNIL 58
F + D ML ++P+ ++ L L+K LFK++ S G+ PD+ +N L
Sbjct: 416 FLLHDEMLASGIKPTKK---TYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNAL 472
Query: 59 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC 118
I+ C V F +L + R P+ VTF ++++G C E ++ EA LF +++ G
Sbjct: 473 IDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGI 532
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINP 178
+P+ ++NTLI+G R G A + EM D NP
Sbjct: 533 KPDHISFNTLISGYSRRGDIKDAFRVRNEML-----------------------DTGFNP 569
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
V+TY ++++G C + + A+ LL EM+ +G+ P+ T+ +++ + K DE
Sbjct: 570 TVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%)
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
++ V++ L+ C R + A E F +M+ G T+ + + L++ + K E A LY
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
EM IK V +N + VL + ++++A M+ GV + TY T + G C +
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ A + T++ K E D Y LI G+
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGM 301
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 128/388 (32%), Positives = 199/388 (51%), Gaps = 30/388 (7%)
Query: 15 PPVCSFN-ILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P V +FN +++G N+ ++ L R+ G P+ TY +L+N C++G+V V
Sbjct: 276 PDVDTFNDVIYGLCRLNRIHEGA-KLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQV 334
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA-LFTKLRVFGCEPNVFTYNTLINGL 132
+L ++ TPN V FT LI G R+ EA A L+ K+ GC P+VFT+NTLI+GL
Sbjct: 335 LLNKVP----TPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGL 390
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ G A+++ +M S NG P+++TYT+++ GFC
Sbjct: 391 CKKGLMGSAVDMVNDM-SANG----------------------CTPNLITYTTLLDGFCK 427
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
N EA +L EM +G + N++ +NV++ LCKNGK+ +A +L M G +P+ F
Sbjct: 428 KNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFT 487
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
+NTL+ G C R A L+ M G +Y+ LI+ + + I+ AL L +ML
Sbjct: 488 FNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDML 547
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
+G D + YN L ++ E+A LFDEM R + + I+GLC+ +
Sbjct: 548 FRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVC 607
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
A+EL R + D+ YN LI+GL
Sbjct: 608 NALELLRDMIHRGLAPDVVTYNSLINGL 635
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 122/396 (30%), Positives = 195/396 (49%), Gaps = 17/396 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S+N++ L ++F + S G+ P +YT+ +++ C + V + +
Sbjct: 171 PTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSL 230
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + PN+V + +LI L R+ EA L ++ + GC P+V T+N +I GL R
Sbjct: 231 LRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCR 290
Query: 135 -----TGHTIVALNLFEEMASGNGEFGV-------EGFVDKAKELFLQMKDENINPDVVT 182
G +V LF + +GV G VD+A+ L ++ P+ V
Sbjct: 291 LNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVP----TPNDVH 346
Query: 183 YTSVIRGFCYANDWNEAKCLLIE-MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+T +I G+ + +EA L + M+ G +P+V TFN ++ LCK G M A +++ M
Sbjct: 347 FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDM 406
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
G PN Y TL+DGFC ++ A + M + G + Y++L+ CKN ++
Sbjct: 407 SANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKV 466
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
AL + GEM KG KPD+ +NTL L ++ + E A L+ +M DGV A+T TY T
Sbjct: 467 PKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTL 526
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
I + I EA++L + C LD YN LI
Sbjct: 527 IHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLI 562
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 182/369 (49%), Gaps = 25/369 (6%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLS-LFKRLNSTGLFPDLYTYNILINCFCKM 65
+LN P+P V F IL K+ D + L+ ++ G PD++T+N LI+ CK
Sbjct: 335 LLNKVPTPNDV-HFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKK 393
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
G + ++ + + TPN +T+T+L+ G C ++++ EA + ++ G E N+ Y
Sbjct: 394 GLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGY 453
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
N L+ L + G AL++ EM+ D+ PD+ T+ +
Sbjct: 454 NVLLRALCKNGKVPKALDMLGEMS-----------------------DKGCKPDIFTFNT 490
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I G C + +A L +M+ GV N VT+N ++ + G + EA +L++ M+ G
Sbjct: 491 LIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRG 550
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
+ YN L+ FC G +A LF M + S ++LING C+ ++ AL
Sbjct: 551 CPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNAL 610
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
L +M+ +G+ PDVV YN+L L ++ + AF LF+++Q +G+ D TY T I
Sbjct: 611 ELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWH 670
Query: 366 CKNSYIVEA 374
C+ +A
Sbjct: 671 CRAGMFDDA 679
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 152/324 (46%), Gaps = 12/324 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FN L L K + + + +++ G P+L TY L++ FCK ++ V
Sbjct: 378 PDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYV 437
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + F N + + L++ LC ++ +A + ++ GC+P++FT+NTLI GL +
Sbjct: 438 LNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCK 497
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
AL L+ +M F G + +A +L M D +T
Sbjct: 498 VDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEIT 557
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I+ FC +A L EM+ + + P+ ++ N++++ LC+ GK+ A LL MI
Sbjct: 558 YNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMI 617
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ P+ YN+L++G C G + A LF +++ G +Y+ LI +C+ +
Sbjct: 618 HRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFD 677
Query: 303 GALSLYGEMLSKGIKPDVVIYNTL 326
A L + P+ V + L
Sbjct: 678 DAYLLLLRGVENAFIPNDVTWYIL 701
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 114/257 (44%), Gaps = 14/257 (5%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ +N+L L KN L + ++ G PD++T+N LI CK+ R +
Sbjct: 450 IMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYR 509
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+L N VT+ +LI I EA L + GC + TYN LI + G
Sbjct: 510 DMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLG 569
Query: 137 HTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
T AL LF+EM NG V G V A EL M + PDVVTY
Sbjct: 570 ATEKALGLFDEMVRKDLVPSNISCNLLINGLCRV-GKVCNALELLRDMIHRGLAPDVVTY 628
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
S+I G C + EA L ++ +G+QP+ +T+N ++ C+ G D+A LL ++
Sbjct: 629 NSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVE 688
Query: 244 IGVRPNAFVYNTLMDGF 260
PN + L+ F
Sbjct: 689 NAFIPNDVTWYILVSNF 705
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 11/241 (4%)
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
HT ++ + EF V +DK L LQ+K+E I + +++ + AN
Sbjct: 100 HTFDVYHVLIDKLGAAKEFKV---IDK---LLLQIKEEGIAFRESLFICIMKYYGRANLP 153
Query: 197 NEAKCLLIEMMDQGV---QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+A +L++M +GV +P ++NV++D L A+ + M+ GV P + +
Sbjct: 154 GQATRMLLDM--KGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTF 211
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
+M C+ V+ A L M GC Y LI+ K + AL L EM
Sbjct: 212 GVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFL 271
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
G PDV +N + L ++++ KL D M G + TY ++GLC+ + E
Sbjct: 272 MGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDE 331
Query: 374 A 374
A
Sbjct: 332 A 332
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 23/209 (11%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N L + L L + G D TYN LI FCK+G + +
Sbjct: 522 TYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEM 581
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+R P+ ++ LI GLC ++ A L + G P+V TYN+LINGL + G+
Sbjct: 582 VRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNI 641
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
A NLF ++ + E I PD +TY ++I C A +++
Sbjct: 642 REAFNLFNKLQA-----------------------EGIQPDAITYNTLICWHCRAGMFDD 678
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
A LL+ ++ PN VT+ +++ K
Sbjct: 679 AYLLLLRGVENAFIPNDVTWYILVSNFIK 707
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 97/219 (44%), Gaps = 1/219 (0%)
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR-LLDLM 241
Y +I A ++ LL+++ ++G+ F IM + +A+R LLD+
Sbjct: 105 YHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDMK 164
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
P YN ++D + A +F M S G TV+++ +++ C E+
Sbjct: 165 GVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEV 224
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A SL +M G P+ V+Y TL L + +V A KL +EM G D T+
Sbjct: 225 DNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDV 284
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I GLC+ + I E +L + + Y L++GL
Sbjct: 285 IYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGL 323
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V ++N L L K + +LF +L + G+ PD TYN LI C+ G
Sbjct: 619 RGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDD 678
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAE 100
+++L R + + F PN VT+ L+ E
Sbjct: 679 AYLLLLRGVENAFIPNDVTWYILVSNFIKE 708
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 192/362 (53%), Gaps = 28/362 (7%)
Query: 40 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
KR+N + PD+ +YN +IN CK R+ +L + S PN+ T+ L+ GLC
Sbjct: 1 MKRIN---ILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCK 57
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEG 159
E R+ EA L +++ G E +V Y+TLI+G F +G
Sbjct: 58 EGRVEEAMRLLGEMKRKGLEVDVVVYSTLISG-----------------------FCSKG 94
Query: 160 FVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 219
+D+ K LF +M ++ I+P+VV Y+ +I GFC W EA +L M ++G+QP+V T+
Sbjct: 95 CLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYT 154
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
++ LCK+G+ +A L DLM + G P+ YN L++G C G + A ++F +M
Sbjct: 155 CMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEK 214
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG--IKPDVVIYNTLFVVLFEIHQVE 337
G V SY+ LI G C N +++ A+ L+ +L G ++PDV+ +NT+ L + +++
Sbjct: 215 GKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLD 274
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+A +++D M G + +T I K+ I +A+EL++ + L Y+ +I
Sbjct: 275 KAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMI 334
Query: 398 DG 399
DG
Sbjct: 335 DG 336
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 201/399 (50%), Gaps = 14/399 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S+N + L K K + + L + + P+ +TY IL++ CK GRV +
Sbjct: 8 PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
LG + R + V +++LI G C++ + ALF ++ G PNV Y+ LING +
Sbjct: 68 LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127
Query: 135 TG---------HTIVALNLFEEMASGN---GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G HT+ + ++ + G +G KA +LF M ++ P VT
Sbjct: 128 KGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVT 187
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I G C +A + M+++G + VV++N ++ LC NGK+DEA +L ++
Sbjct: 188 YNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLL 247
Query: 243 QIG--VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+ G V P+ +NT++ G C GR+++A E++ +M G +F+ ILI Y K+
Sbjct: 248 EDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGI 307
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
I+ A+ L+ + G+ P Y+ + ++H + A LF M+ G++ + Y T
Sbjct: 308 IDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNT 367
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ LCK S + +A LF+ ++ CE D ++N +IDG
Sbjct: 368 LMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDG 406
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 201/412 (48%), Gaps = 16/412 (3%)
Query: 5 DYMLNMRPSP--PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
D ++ M S P ++ IL L K + + L + GL D+ Y+ LI+ F
Sbjct: 31 DLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGF 90
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C G + G + +L +PN V ++ LI G C + EA A+ + G +P+V
Sbjct: 91 CSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDV 150
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
+TY +I GL + G AL+LF+ M E EG + A ++F
Sbjct: 151 YTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFET 210
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG--VQPNVVTFNVIMDELCKN 228
M ++ +VV+Y ++I G C +EA L +++ G V+P+V+TFN ++ LCK
Sbjct: 211 MLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKE 270
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G++D+A + D MI+ G N F + L+ + +G +++A EL+ + +G + +Y
Sbjct: 271 GRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTY 330
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
S++I+G+CK + A L+ M G+ P + YNTL L + +E+A +LF EM+
Sbjct: 331 SVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKE 390
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
DT ++ IDG K I A EL ++ + D Y+ I+ L
Sbjct: 391 SNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRL 442
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 195/389 (50%), Gaps = 20/389 (5%)
Query: 25 GCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFT 84
GCL + K +LF + G+ P++ Y+ LIN FCK G VL +
Sbjct: 94 GCLDRGK------ALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQ 147
Query: 85 PNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNL 144
P+ T+T +I GLC + R +A LF + G EP+ TYN LINGL + G A +
Sbjct: 148 PDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKI 207
Query: 145 FEEMASGNGEFGV------------EGFVDKAKELFLQMKDEN--INPDVVTYTSVIRGF 190
FE M V G +D+A +LF + ++ + PDV+T+ +VI+G
Sbjct: 208 FETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGL 267
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C ++A + M+++G N+ T ++++ E K+G +D+A L + ++G+ P++
Sbjct: 268 CKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSS 327
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
Y+ ++DGFC +N AK LF M+ G + T+F Y+ L+ CK +E A L+ E
Sbjct: 328 TTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQE 387
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M +PD + +N + + + A +L ++MQ+ G+ D +TY +FI+ L K
Sbjct: 388 MKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQ 447
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ EA F ++ D Y+ LI G
Sbjct: 448 MEEAKGAFDSMIASGITPDNHVYDSLIKG 476
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 127/230 (55%)
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
MK NI PD+V+Y ++I G C +A LL+EM +PN T+ ++MD LCK G+
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
++EA RLL M + G+ + VY+TL+ GFC G ++R K LF M G + V YS
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LING+CK A ++ M +GI+PDV Y + L + + +A LFD M G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
T TY I+GLCK I +A ++F T+ L++ +YN LI GL
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGL 230
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 173/374 (46%), Gaps = 49/374 (13%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
+ + R P V ++ + G L K+ L LF + G P TYN+LIN CK
Sbjct: 139 HTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKE 198
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG--CEPNVF 123
G + F + +L V++ +LI GLC ++ EA LF+ L G EP+V
Sbjct: 199 GCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVI 258
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMAS----GN--------GEFGVEGFVDKAKELFLQM 171
T+NT+I GL + G A+ +++ M GN GE+ G +DKA EL+ ++
Sbjct: 259 TFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRV 318
Query: 172 KDENINPDVVTYTSVIRGFCYAN----------------------DWN------------ 197
+ P TY+ +I GFC + D+N
Sbjct: 319 HKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSL 378
Query: 198 -EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+A+ L EM + +P+ ++FN+++D K G + A LL+ M Q+G+ P+A+ Y++
Sbjct: 379 EQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSF 438
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
++ G++ AK F SM + G T Y LI G+ N EIE ++L +M G+
Sbjct: 439 INRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGV 498
Query: 317 KPDVVIYNTLFVVL 330
D+ I N++ L
Sbjct: 499 ILDLEITNSILTFL 512
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 66/166 (39%), Gaps = 6/166 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P SFNI+ K + L + GL PD YTY+ IN K+G++
Sbjct: 395 PDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGA 454
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ S TP+ + SLIKG I E L ++ G ++ N+++ L
Sbjct: 455 FDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCN 514
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
+ + + L +S G DK L MK + NP +
Sbjct: 515 SAEHLHVMELLPNFSS-ESSGGTSISCDK-----LLMKIQKFNPKL 554
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 188/380 (49%), Gaps = 24/380 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FN L G L ++ ++ F L F D+Y++ I+I C+ G + F +LG +
Sbjct: 131 FNSLLGSLVRSNCFEKAWLFFNELKERVKF-DVYSFGIMIKGCCENGNLDKSFQLLGLLQ 189
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+PN V +T+LI G C I A F K+ G N +T+ LINGL++ G
Sbjct: 190 DMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKK 249
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
+LFE+M NG F P++ TY ++ +C A
Sbjct: 250 DGFDLFEKMKI-NGLF----------------------PNLYTYNCLMNEYCGEGKICRA 286
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
L EM ++GV+ NVVT+N ++ +C+ ++ EA +L+D M + V PN YNTL+ G
Sbjct: 287 FDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGG 346
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
FC G +++A L ++S G + ++ +Y+ILI GY K +G L EM +GI P
Sbjct: 347 FCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPS 406
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
V L + ++E+AF+++ M++ G+ D + Y I GLC + E+ +LFR
Sbjct: 407 KVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFR 466
Query: 380 TLRILKCELDIRAYNCLIDG 399
++ + E YN +I G
Sbjct: 467 SMGEMHVEPSDVIYNTMIHG 486
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 166/328 (50%), Gaps = 23/328 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+F +L L K LF+++ GLFP+LYTYN L+N +C G++ F + +
Sbjct: 234 TFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEM 293
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
N VT+ +LI G+C E R+ EA L +++ PN+ TYNTLI G G+
Sbjct: 294 RERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGN- 352
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+DKA L Q+K ++P +VTY +I G+ A +W
Sbjct: 353 ----------------------LDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKG 390
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
L EM +G+ P+ VT V++D + +M++A ++ M + G+ P+ +VY L+
Sbjct: 391 VADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIH 450
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G C+ G + + +LF SM M + Y+ +I+GYCK AL L EM +KG+ P
Sbjct: 451 GLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVP 510
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+V Y+++ VL + + E A L D+M
Sbjct: 511 NVASYSSIIGVLCKDGKWEEAEVLLDKM 538
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 177/381 (46%), Gaps = 23/381 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V SF I+ +N + D L L GL P++ Y LI+ CK G + +
Sbjct: 162 VYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFD 221
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ N TFT LI GL + + LF K+++ G PN++TYN L+N
Sbjct: 222 KMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMN------ 275
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
E+ EG + +A +LF +M++ + +VVTY ++I G C
Sbjct: 276 -----------------EYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERV 318
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
EA+ L+ +M V PN++T+N ++ C G +D+AS LLD + G+ P+ YN L
Sbjct: 319 WEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNIL 378
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
++G+ G +L ME G + + + ++LI+ Y + +E+E A +Y M G+
Sbjct: 379 IEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGL 438
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
PDV +Y L L ++ + KLF M V Y T I G CK A+
Sbjct: 439 VPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALR 498
Query: 377 LFRTLRILKCELDIRAYNCLI 397
L R + ++ +Y+ +I
Sbjct: 499 LLREMEAKGLVPNVASYSSII 519
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 124/266 (46%), Gaps = 43/266 (16%)
Query: 174 ENINPDVVT---YTSVIRGFCYANDWNEAKCLLIEMMDQGV--QPNVVTFNVIMDELCKN 228
+N NP + T Y S+I + ++A EM+D+G+ +PN+ FN ++ L ++
Sbjct: 84 QNQNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNI--FNSLLGSLVRS 141
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
++A + + + V+ + + + ++ G C G ++++ +L ++ MG + V Y
Sbjct: 142 NCFEKAWLFFNELKE-RVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIY 200
Query: 289 SILINGYCKNKEIEGALSLY---GEM----------------LSKGIK------------ 317
+ LI+G CKN +IE A + GEM KG+K
Sbjct: 201 TTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKI 260
Query: 318 ----PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
P++ YN L ++ RAF LFDEM+ GV A+ TY T I G+C+ + E
Sbjct: 261 NGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWE 320
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
A +L ++ ++ YN LI G
Sbjct: 321 AEKLVDQMKKAAVSPNLITYNTLIGG 346
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 46/114 (40%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + +L L + LF+ + + P YN +I+ +CK +
Sbjct: 440 PDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRL 499
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTL 128
L + PN +++S+I LC + + EA L K+ +P+ N +
Sbjct: 500 LREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMI 553
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/361 (33%), Positives = 175/361 (48%), Gaps = 26/361 (7%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF---V 73
V SFNI+ L K + + + + G+ P++ TYN LI+ +CKMGR+ +
Sbjct: 155 VISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADA 214
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L ++ PN VT+ LI G C + + A +F +++ G PNV TYN LINGL
Sbjct: 215 ILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLC 274
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
G VD+A L QM ++ P+VVT+ +I GFC
Sbjct: 275 SDGK-----------------------VDEAVALRDQMVSSDLEPNVVTHNVLINGFCKN 311
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
NEA L +M QGV PN +T+ ++D CK+G+M++A L ++MI G+ P Y
Sbjct: 312 KTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTY 371
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N L+ G C G V A+ L M S + V +Y+ILI+ CK E A+ L EM
Sbjct: 372 NCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFE 431
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG+ P V YNTL + A + M+R G A+ T+ I G C + +
Sbjct: 432 KGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLED 491
Query: 374 A 374
A
Sbjct: 492 A 492
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/360 (32%), Positives = 176/360 (48%), Gaps = 20/360 (5%)
Query: 40 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
FKR G L + N L++ K V +++ N ++F ++ GLC
Sbjct: 108 FKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCK 167
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEG 159
++ A + ++V+G PNV TYNTLI+G + G G
Sbjct: 168 VGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRI--------------------G 207
Query: 160 FVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 219
+ KA + +M + I P+ VTY +I GFC + + A + EM QG++PNVVT+N
Sbjct: 208 KMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYN 267
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
++++ LC +GK+DEA L D M+ + PN +N L++GFC VN A LF ME
Sbjct: 268 ILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQ 327
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G +Y+ LI+ YCK+ +E A +LY M+ +GI P+V YN L L V+ A
Sbjct: 328 GVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAA 387
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
L +EM ++AD TY ID LCK +AV+L + YN L+DG
Sbjct: 388 RSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDG 447
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/336 (34%), Positives = 174/336 (51%), Gaps = 21/336 (6%)
Query: 15 PPVCSFNIL------FGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV 68
P V ++N L G + K D +L K + + G+ P+ TYNILI+ FCK V
Sbjct: 188 PNVITYNTLIDGYCKMGRIGKMYKADAIL---KEMVAKGICPNEVTYNILIDGFCKDENV 244
Query: 69 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTL 128
S V G + R PN VT+ LI GLC++ ++ EA AL ++ EPNV T+N L
Sbjct: 245 SGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVL 304
Query: 129 INGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENI 176
ING + A+NLF +M + + +G ++ A L+ M D I
Sbjct: 305 INGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGI 364
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
P+V TY +I G C D A+ L+ EM+ + + +VVT+N+++D LCK G+ +A +
Sbjct: 365 FPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVK 424
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
LLD M + G+ P+ YNTLMDG+C G + A + ME G V ++++LI G+C
Sbjct: 425 LLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFC 484
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
+E A L EML +G+ P+ Y + + E
Sbjct: 485 LKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMME 520
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 192/384 (50%), Gaps = 26/384 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S N L L K + +++ + + ++ ++NI++N CK+G+++ V+ +
Sbjct: 122 SCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDM 181
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRI---MEAAALFTKLRVFGCEPNVFTYNTLINGLYRT 135
+PN +T+ +LI G C RI +A A+ ++ G PN TYN LI+G +
Sbjct: 182 KVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCK- 240
Query: 136 GHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
+E SG A +F +M+ + + P+VVTY +I G C
Sbjct: 241 ----------DENVSG------------AMRVFGEMQRQGLRPNVVTYNILINGLCSDGK 278
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
+EA L +M+ ++PNVVT NV+++ CKN ++EA L + M + GV PNA Y T
Sbjct: 279 VDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTT 338
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L+D +C GR+ A L+ M G V +Y+ LI G C+ +++ A SL EM+SK
Sbjct: 339 LIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKK 398
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ DVV YN L L + + +A KL DEM G+ TY T +DG C+ + A+
Sbjct: 399 LSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAAL 458
Query: 376 ELFRTLRILKCELDIRAYNCLIDG 399
+ + + ++ +N LI G
Sbjct: 459 IVRTRMERKGKQANVVTHNVLIKG 482
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 174/348 (50%), Gaps = 26/348 (7%)
Query: 56 NILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV 115
++L+ F + ++ GF R F + ++ L+ GL ES + ++ ++
Sbjct: 89 DMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIK 148
Query: 116 FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDEN 175
E NV ++N ++NGL + G +++A ++ MK
Sbjct: 149 RKIELNVISFNIVVNGLCKVGK-----------------------LNRAGDVIEDMKVWG 185
Query: 176 INPDVVTYTSVIRGFCYANDWNE---AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 232
++P+V+TY ++I G+C + A +L EM+ +G+ PN VT+N+++D CK+ +
Sbjct: 186 VSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVS 245
Query: 233 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
A R+ M + G+RPN YN L++G C G+V+ A L M S V ++++LI
Sbjct: 246 GAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLI 305
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
NG+CKNK + A++L+ +M +G+ P+ + Y TL + ++E AF L++ M G+
Sbjct: 306 NGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIF 365
Query: 353 ADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ TY I GLC+ + A L + K D+ YN LID L
Sbjct: 366 PEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSL 413
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 121/262 (46%), Gaps = 47/262 (17%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++NIL L + D ++L ++ S+ L P++ T+N+LIN FCK V+ +
Sbjct: 261 PNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINL 320
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + PNA+T+T+LI C + R+ +A AL+ + G P V TYN LI GL R
Sbjct: 321 FNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCR 380
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINP---- 178
G A +L EM S V +G KA +L +M ++ +NP
Sbjct: 381 KGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVT 440
Query: 179 -------------------------------DVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
+VVT+ +I+GFC +A LL EM+
Sbjct: 441 YNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEML 500
Query: 208 DQGVQPNVVTFNVIMDELCKNG 229
++G+ PN T+ +I +E+ + G
Sbjct: 501 ERGLVPNRTTYEIIKEEMMEKG 522
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
N+ + + L+ F ++ R E F G ++ S + L++G K E +Y
Sbjct: 84 NSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVY 143
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
EM+ + I+ +V+ +N + L ++ ++ RA + ++M+ GV+ + TY T IDG CK
Sbjct: 144 REMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKM 203
Query: 369 SYIVEAVELFRTLRILK-------CELDIRAYNCLIDG 399
I ++++ ILK C ++ YN LIDG
Sbjct: 204 GRI---GKMYKADAILKEMVAKGICPNEV-TYNILIDG 237
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 186/386 (48%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + K + + R+ + G PD+ TYNI+I C ++ V
Sbjct: 145 PDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTV 204
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++L P +T+T LI+ E I EA L ++ G P+++TYN +I G+ +
Sbjct: 205 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 264
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
EG V++A EL + + PDV++Y ++R F
Sbjct: 265 -----------------------EGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQG 301
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
W+E + L+ EM +G +PN VT+++++ LC+ G++DEA +L +MI+ + P+ + Y+
Sbjct: 302 KWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYD 361
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ C GR++ A + M S GC + +Y+ ++ CKN AL ++ ++
Sbjct: 362 PLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGM 421
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G P+V YNT+ L+ RA + M G+ D TY + I LC++ + EA
Sbjct: 422 GCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEA 481
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ L + + +YN ++ GL
Sbjct: 482 IGLLDDMEQSGFRPTVISYNIVLLGL 507
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 177/379 (46%), Gaps = 12/379 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++NI+ G L + L++ +L P + TY ILI G ++ +
Sbjct: 180 PDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKL 239
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L P+ T+ ++I+G+C E + AA L T L GCEP+V +YN L+
Sbjct: 240 LEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLN 299
Query: 135 TGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKDENINPDVVT 182
G L EM S E G +D+A + M ++ + PD +
Sbjct: 300 QGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYS 359
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I C + A ++ M+ G P++V +N I+ LCKNG ++A + + +
Sbjct: 360 YDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLR 419
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+G PN YNT++ G +RA + +M S G +Y+ LI+ C++ +E
Sbjct: 420 GMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVE 479
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ L +M G +P V+ YN + + L ++ +++ A +F EM G + TY I
Sbjct: 480 EAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLI 539
Query: 363 DGLCKNSYIVEAVELFRTL 381
+G+ + EA+EL +L
Sbjct: 540 EGIGFAGWRTEAMELANSL 558
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 168/355 (47%), Gaps = 13/355 (3%)
Query: 58 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 117
L+N CK G+ + L ++ +TP+ + T LIKG I +A+ + L
Sbjct: 84 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESH- 142
Query: 118 CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAK 165
EP+VF YN +I+G + A + M + G + A
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
+ Q+ +N P V+TYT +I NEA LL EM+ +G+ P++ T+N I+ +
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 262
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
CK G ++ A+ L+ + G P+ YN L+ F G+ + ++L M S GC
Sbjct: 263 CKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 322
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
+YSILI+ C+ I+ A+S+ M+ K + PD Y+ L L + +++ A + D
Sbjct: 323 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 382
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
M +G D Y T + LCKN +A+E+F LR + C ++ +YN +I L
Sbjct: 383 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISAL 437
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 191/386 (49%), Gaps = 9/386 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ + L + K + LF+ + G+ PD+YTY ILI+ FCK G +
Sbjct: 450 PDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSW 509
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ +PN VT+T+L+ ++++A +F ++ C PN TY+ LI+GL +
Sbjct: 510 FDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCK 569
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDE-NINPDVVTYTSVIRGFCYA 193
G A ++E++ G G V+ + + + D I P+VVTY ++I G C A
Sbjct: 570 AGEIQKACEVYEKL------IGTSGNVES--DFYFEGNDTCTIAPNVVTYGALIDGLCKA 621
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
++A LL M+ G +PN + ++ ++D CK GK+D A + M + G P+ Y
Sbjct: 622 QKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTY 681
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
+L+D GR++ A ++ M + C V +Y+ +I+G K EIE AL+L M
Sbjct: 682 TSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEE 741
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG P+VV Y L L + + + + KLF +M G A + TYR I+ C + E
Sbjct: 742 KGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDE 801
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
A L ++ ++ Y+C + G
Sbjct: 802 AHLLLDEMKHTHWPKHLQGYHCAVQG 827
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 186/390 (47%), Gaps = 41/390 (10%)
Query: 26 CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTP 85
CL ++ + K + G PD TY +I C+ +V F++ + R+ P
Sbjct: 426 CLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNP 485
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
+ T+T LI C I +A + F ++R GC PNV TY L++ ++ I
Sbjct: 486 DVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLI------ 539
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
+A ++F +M D P+ VTY+++I G C A + +A C + E
Sbjct: 540 -----------------QAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKA-CEVYE 581
Query: 206 MM--DQG---------------VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
+ G + PNVVT+ ++D LCK K+ +A LLD M+ G P
Sbjct: 582 KLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEP 641
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
N VY+ L+DGFC G+++ A+E+F+ M G +V +Y+ LI+ K+ ++ A+ +
Sbjct: 642 NQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVL 701
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
EML+ P+VV Y + L ++ ++E+A L M+ G + + TY IDGL K
Sbjct: 702 SEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKT 761
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLID 398
+++LF+ + C + Y LI+
Sbjct: 762 GKADASLKLFKQMNSKGCAPNYVTYRVLIN 791
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 185/410 (45%), Gaps = 45/410 (10%)
Query: 13 SPPPVCSFNILFGCLAKNKHY------DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
SPP ++NI G + + D V +++ + + + C C +G
Sbjct: 372 SPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVG 431
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ F +L ++R F P+ T+T +I LC ++ ++ LF +++ G P+V+TY
Sbjct: 432 KFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYT 491
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
LI+ F G +++A+ F +M+ +P+VVTYT++
Sbjct: 492 ILIDS-----------------------FCKAGLIEQARSWFDEMRSVGCSPNVVTYTAL 528
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG- 245
+ + + +A + M+D PN VT++ ++D LCK G++ +A + + +I
Sbjct: 529 LHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSG 588
Query: 246 ---------------VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ PN Y L+DG C +V+ A EL +M + GC Y
Sbjct: 589 NVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDA 648
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI+G+CK +I+ A ++ M G P V Y +L +F+ +++ A K+ EM D
Sbjct: 649 LIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDS 708
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ TY IDGL K I +A+ L + C ++ Y LIDGL
Sbjct: 709 CNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGL 758
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 188/438 (42%), Gaps = 65/438 (14%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
FD M ++ SP V ++ L K+K +F R+ +P+ TY+ LI+ C
Sbjct: 510 FDEMRSVGCSPN-VVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLC 568
Query: 64 KMGRVSHGFVVLGRILRSC----------------FTPNAVTFTSLIKGLCAESRIMEAA 107
K G + V +++ + PN VT+ +LI GLC ++ +A
Sbjct: 569 KAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAH 628
Query: 108 ALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV---------- 157
L + GCEPN Y+ LI+G + G A +F M V
Sbjct: 629 ELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRM 688
Query: 158 --EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNV 215
+G +D A ++ +M +++ NP+VVTYT++I G + +A LL M ++G PNV
Sbjct: 689 FKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNV 748
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
VT+ ++D L K GK D + +L M G PN Y L++ C G ++ A L
Sbjct: 749 VTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDE 808
Query: 276 M---------ESMGCTHTVFS------------------------YSILINGYCKNKEIE 302
M + C FS Y +LI+ + K +E
Sbjct: 809 MKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLE 868
Query: 303 GALSLYGEMLSKGIKPDVV---IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
AL L+ E++ ++ +Y +L L QVE AF L+ EM R G+ D +
Sbjct: 869 TALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFV 928
Query: 360 TFIDGLCKNSYIVEAVEL 377
+ + GL + + EA++L
Sbjct: 929 SLVKGLIEVNKWDEALQL 946
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 171/403 (42%), Gaps = 40/403 (9%)
Query: 33 YDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTS 92
++ +S R+ P++ TY L++ F K + ++ ++ PN F S
Sbjct: 287 FNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNS 346
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVA--LNL----FE 146
L+ G C A LF ++ G P YN I + A L+L +E
Sbjct: 347 LVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYE 406
Query: 147 EMASGN--------GEF-----GVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
EM + + F GV F +KA ++ +M + PD TYT VI C A
Sbjct: 407 EMLAASCVLNKVNTANFSRCLCGVGKF-EKAFQILKEMMRKGFVPDTSTYTKVITFLCQA 465
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
++ L EM GV P+V T+ +++D CK G +++A D M +G PN Y
Sbjct: 466 KKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTY 525
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
L+ + + ++ +A ++F M C +YS LI+G CK EI+ A +Y +++
Sbjct: 526 TALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIG 585
Query: 314 KG----------------IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
I P+VV Y L L + +V A +L D M G +
Sbjct: 586 TSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIV 645
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCEL--DIRAYNCLID 398
Y IDG CK I A E+F LR+ KC + Y LID
Sbjct: 646 YDALIDGFCKIGKIDNAQEVF--LRMTKCGYLPSVHTYTSLID 686
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 190/454 (41%), Gaps = 72/454 (15%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L LA + + K ++++G D T CK+GR +
Sbjct: 202 PSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWADA--- 258
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + F + V T +I GL S EA + ++R C PNV TY TL++G +
Sbjct: 259 LNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 318
Query: 135 -----------------------------------TGHTIVALNLFEEMAS--------- 150
G A LF M +
Sbjct: 319 KKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVA 378
Query: 151 ---------GNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
G E +D ++++ +M + + V + R C + +A
Sbjct: 379 YNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQ 438
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
+L EMM +G P+ T+ ++ LC+ K++++ L M + GV P+ + Y L+D FC
Sbjct: 439 ILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFC 498
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
G + +A+ F M S+GC+ V +Y+ L++ Y K+K++ A ++ M+ P+ V
Sbjct: 499 KAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAV 558
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEM-------QRD---------GVAADTWTYRTFIDGL 365
Y+ L L + ++++A ++++++ + D +A + TY IDGL
Sbjct: 559 TYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGL 618
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
CK + +A EL + CE + Y+ LIDG
Sbjct: 619 CKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDG 652
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 170/387 (43%), Gaps = 64/387 (16%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L L K + L + + G P+ Y+ LI+ FCK+G++ + V
Sbjct: 606 PNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEV 665
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R+ + + P+ T+TSLI + + R+ A + +++ C PNV TY +I+GL +
Sbjct: 666 FLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSK 725
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G ALNL M+++ +P+VVTYT++I G
Sbjct: 726 VGEIEKALNLLS-----------------------LMEEKGCSPNVVTYTALIDGLGKTG 762
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM------------- 241
+ + L +M +G PN VT+ V+++ C G +DEA LLD M
Sbjct: 763 KADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYH 822
Query: 242 -----------IQIGVR---------PNAFVYNTLMDGFCLTGRVNRA----KELFVSME 277
+G+ P A VY L+D F GR+ A KEL
Sbjct: 823 CAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSS 882
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
S+ T T Y+ LI C ++E A +LY EM KGI PD++++ +L L E+++ +
Sbjct: 883 SLNMTSTGM-YASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWD 941
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDG 364
A +L +GV W DG
Sbjct: 942 EALQLCYGRCHEGV---NWQDNKSFDG 965
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 146/355 (41%), Gaps = 50/355 (14%)
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN 152
L++ C EA +L+ FG P+ TYN L+ L G + + +EM++
Sbjct: 175 LVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASG 234
Query: 153 --------GEFGVE-GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
G F V + + ++ E+ N D V T +I G A+ +NEA L
Sbjct: 235 FCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFL 294
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
M PNVVT+ ++ K + R++++M+ G PN ++N+L+ G+C
Sbjct: 295 HRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNA 354
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI---------------------- 301
G A +LF M + G +Y+I I C +E+
Sbjct: 355 GDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCV 414
Query: 302 -------------------EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
E A + EM+ KG PD Y + L + +VE++F L
Sbjct: 415 LNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLL 474
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
F EM+R GV D +TY ID CK I +A F +R + C ++ Y L+
Sbjct: 475 FQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALL 529
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 40/91 (43%)
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
++L+ C++ + AL G + G +P V YN L VL QVE F++ EM
Sbjct: 173 NVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSA 232
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
G D T F LCK +A+ +
Sbjct: 233 SGFCMDRSTIGYFAQALCKVGRWADALNMLE 263
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 191/395 (48%), Gaps = 12/395 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +N L + D + +R+ + G+ P + T+ LI +CKM R+ F +
Sbjct: 224 VVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYE 283
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++RS P+ VT ++L+ GLC + R EA ALF ++ G PN TY T I+ L +
Sbjct: 284 GMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQ 343
Query: 137 HTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
+L L EM S G EG +++AK++ +NI P+ VTYT
Sbjct: 344 RVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYT 403
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
++ C A + + A+ +L++M ++ V PNVVTF+ I++ L K G + +A+ + M
Sbjct: 404 VLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDS 463
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G+ PN Y TL+DGF A +++ M G F L+NG KN IE A
Sbjct: 464 GIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEA 523
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
+L+ +M +G+ D V Y TL LF+ + A K+ E+ ++ D Y FI+
Sbjct: 524 EALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINC 583
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
LC+ EA + +R E D YN +I
Sbjct: 584 LCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISA 618
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 177/384 (46%), Gaps = 23/384 (5%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +N L K + L++ +R+ + GL D+ YN L+ F G + V
Sbjct: 189 VVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAE 248
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
R+ P+ VT T+LI C RI EA L+ + G P+V T + L++GL R G
Sbjct: 249 RMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDG 308
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
A LF EM DK + P+ VTY + I
Sbjct: 309 RFSEAYALFREM-------------DKI----------GVAPNHVTYCTFIDSLAKVQRV 345
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
NE+ LL EM+ +GV ++V + +MD L K GK++EA +L + + PN Y L
Sbjct: 346 NESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVL 405
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+D C G ++ A+++ + ME + V ++S ++NG K I A +M GI
Sbjct: 406 VDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGI 465
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
P+VV Y TL F+ E A ++ +M +GV A+ + + ++GL KN I EA
Sbjct: 466 APNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEA 525
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
LF+ + LD Y L+DGL
Sbjct: 526 LFKDMGERGLLLDHVNYATLMDGL 549
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 166/368 (45%), Gaps = 26/368 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ L L K + L + + L L PD YN+ INC C++G+ S L +
Sbjct: 541 NYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEM 600
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ P+ T+ ++I C E +A L +++ +PN+ TY TL+ GL G
Sbjct: 601 RNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVV 660
Query: 139 IVALNLFEEMASGNGEFGVEGFV---------------DKAKELFLQ----MKDENINPD 179
A L EMAS GF ++ + L+ M ++ D
Sbjct: 661 EKAKYLLNEMASA-------GFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHAD 713
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
+ Y +++ C +A +L EM+ +G+ P+ +TFN ++ CK+ +D A
Sbjct: 714 ITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYA 773
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M+ G+ PN +NTL+ G GR+ A + M+ MG +Y IL+ GY K
Sbjct: 774 QMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKS 833
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
AL LY EM+SKG P YN+L + + +A +LF EM+R GV + TY
Sbjct: 834 NKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYD 893
Query: 360 TFIDGLCK 367
++G K
Sbjct: 894 ILLNGWSK 901
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 189/421 (44%), Gaps = 47/421 (11%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
L K + + + S + P+ TY +L++ C+ G + +L ++ +PN
Sbjct: 374 LGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPN 433
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
VTF+S++ GL I +AA K++ G PNV TY TLI+G ++ AL+++
Sbjct: 434 VVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYR 493
Query: 147 EM--------------------ASGN-----------GEFGV----------------EG 159
+M +GN GE G+ G
Sbjct: 494 DMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTG 553
Query: 160 FVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 219
+ A ++ ++ + N++PD V Y I C ++EAK L EM + G++P+ T+N
Sbjct: 554 NMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYN 613
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
++ C+ G +A +LL+ M ++PN Y TL+ G G V +AK L M S
Sbjct: 614 TMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASA 673
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G T T +Y ++ ++ L ++ M+ G+ D+ +YNTL VL +A
Sbjct: 674 GFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKA 733
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ DEM G+A DT T+ I G CK+S++ A + + +I +N L+ G
Sbjct: 734 TIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGG 793
Query: 400 L 400
L
Sbjct: 794 L 794
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 163/356 (45%), Gaps = 23/356 (6%)
Query: 23 LFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSC 82
L L KN + + +LFK + GL D Y L++ K G + V ++
Sbjct: 510 LVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERN 569
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
+P+AV + I LC + EA + ++R G EP+ TYNT+I+ R G+T AL
Sbjct: 570 LSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKAL 629
Query: 143 NLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
L EM K +I P+++TYT+++ G A +AK L
Sbjct: 630 KLLNEM-----------------------KWSSIKPNLITYTTLVVGLLEAGVVEKAKYL 666
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
L EM G P +T+ ++ + + +LM+ G+ + VYNTL+ C
Sbjct: 667 LNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCC 726
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G +A + M G +++ LI G+CK+ ++ A + Y +ML +G+ P++
Sbjct: 727 HGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIAT 786
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
+NTL L ++ A + EM++ G+ + TY + G K S VEA+ L+
Sbjct: 787 FNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLY 842
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 151/352 (42%), Gaps = 47/352 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +N+ CL + + S K + +TGL PD TYN +I+ C+ G S +
Sbjct: 572 PDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKL 631
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + S PN +T+T+L+ GL + +A L ++ G P TY ++
Sbjct: 632 LNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSG 691
Query: 135 TGHTIVALNLFEEM--ASGNGEFGV----------EGFVDKAKELFLQMKDENINPDVVT 182
+ V L + E M A + + V G KA + +M I PD +T
Sbjct: 692 SRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTIT 751
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ ++I G C ++ + A +M+ QG+ PN+ TFN ++ L G++ EA ++ M
Sbjct: 752 FNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMK 811
Query: 243 QIGVRPN-----------------------------------AFVYNTLMDGFCLTGRVN 267
++G+ PN A YN+L+ F G +N
Sbjct: 812 KMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMN 871
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
+AKELF M+ G HT +Y IL+NG+ K + L +M G KP
Sbjct: 872 QAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPS 923
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 188/416 (45%), Gaps = 30/416 (7%)
Query: 5 DYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCK 64
++++ P+PPP L LA + S F+ + D T N +I +C
Sbjct: 39 SHVVSSLPAPPPARLLRRLIPALASSGLV-AAASRFRPVPG-----DPLTLNSIILSYCS 92
Query: 65 MGRVSHGFVVLGRILRSCFTP------NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC 118
+ H +LRS P + V++ + GL + A + +++ G
Sbjct: 93 L----HALRPALSLLRSSSGPQPQVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGV 148
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG--EFGVEGF----------VDKAKE 166
+ T +T + GL RTG A L E + G G GV G+ D A
Sbjct: 149 PWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAA 208
Query: 167 LFL--QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
L + +M + ++ DVV Y +++ GF Y+ D + A + M GV+P+VVT ++ E
Sbjct: 209 LAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGE 268
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
CK +++EA L + M++ GV P+ + L+DG C GR + A LF M+ +G
Sbjct: 269 YCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPN 328
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
+Y I+ K + + +L L GEM+S+G+ D+V+Y T+ L + ++E A +
Sbjct: 329 HVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLR 388
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D + + TY +D C+ I A ++ + ++ ++ +++GL
Sbjct: 389 HALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGL 444
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G+ PD T+N LI CK + + F ++L +PN TF +L+ GL + RI EA
Sbjct: 744 GIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEA 803
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GE 154
+ +++ G EPN TY+ L+ G + + + AL L+ EM S +
Sbjct: 804 DTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISD 863
Query: 155 FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
F G +++AKELF +MK + TY ++ G+ + E + LL +M + G +P+
Sbjct: 864 FAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPS 923
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
T + + K G EA RLL + ++
Sbjct: 924 KGTISSMSRAFSKPGMTWEARRLLKTLFKV 953
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 125/287 (43%), Gaps = 17/287 (5%)
Query: 6 YMLNMRPS----PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
Y+LN S P P+ +L C Y +L + + + GL D+ YN L++
Sbjct: 665 YLLNEMASAGFTPTPLTYRRVLQACSGSRSPY-VILEVHELMMGAGLHADITVYNTLVHV 723
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
C G +VL +L P+ +TF +LI G C S + A A + ++ G PN
Sbjct: 724 LCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPN 783
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG-------VEGFVDKAKE-----LFL 169
+ T+NTL+ GL G A + EM E V G+ K+ + L+
Sbjct: 784 IATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYC 843
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M + P TY S+I F A N+AK L EM +GV T++++++ K
Sbjct: 844 EMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLR 903
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
E LL M ++G +P+ +++ F G A+ L ++
Sbjct: 904 NGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTL 950
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/391 (31%), Positives = 199/391 (50%), Gaps = 16/391 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FN++ + K D + +F+ + PD+YTY L++ CK R+ +
Sbjct: 197 PNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSL 256
Query: 75 LGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
L + + CF P+ VTF LI GLC + + AA L + + GC PN TYNTLI+GL
Sbjct: 257 LDEMQIDGCF-PSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLC 315
Query: 134 RTGHTIVALNLFEEMASGNG-----EFG--VEGFVDKAKEL-----FLQMKDENINPDVV 181
G A++L + M S +G + G V + + L M++ +
Sbjct: 316 LKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEY 375
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y+++I G EA L EM +G + N + ++ ++D LC++GK D+A +L M
Sbjct: 376 VYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEM 435
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
G PNA+ ++LM GF G +RA E++ M T YS+LI+G CK+ ++
Sbjct: 436 TNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKV 495
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM--QRDGVAADTWTYR 359
+ A+ ++ +ML KG KPDVV Y+++ L VE A +L++EM Q D TY
Sbjct: 496 KEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYN 555
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
++ LCK S I A++L ++ C+ D+
Sbjct: 556 ILLNTLCKQSSISRAIDLLNSMLDRGCDPDL 586
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 185/386 (47%), Gaps = 28/386 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRL---NSTGLFPDLYTYNILINCFCKMGRVSHGFVVL 75
SFN + + + + L + + + P++ T+N++I CK+G V V
Sbjct: 163 SFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVF 222
Query: 76 GRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ +R C P+ T+ +L+ GLC RI EA +L ++++ GC P+ T+N LINGL +
Sbjct: 223 RDMTIRKC-EPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCK 281
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G A L + M FL+ P+ VTY ++I G C
Sbjct: 282 KGDLSRAAKLVDNM-------------------FLK----GCIPNEVTYNTLIHGLCLKG 318
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+A LL M+ PNVVT+ I++ L K G+ + + +L LM + G N +VY+
Sbjct: 319 KLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYS 378
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+ G G+ A LF M G YS +I+G C++ + + A+ + EM +K
Sbjct: 379 TLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNK 438
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G P+ ++L FE RA +++ +M + + Y I GLCK+ + EA
Sbjct: 439 GCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEA 498
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ ++ + C+ D+ AY+ +I+GL
Sbjct: 499 MMVWTQMLGKGCKPDVVAYSSMINGL 524
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/366 (30%), Positives = 168/366 (45%), Gaps = 34/366 (9%)
Query: 54 TYNILINCFCKMGRVSHGFVVLGR-------ILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
T+ LIN + +G VL R I CF V F + K E +A
Sbjct: 92 TFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEKCFI---VIFKAYGKAHLPE----KA 144
Query: 107 AALFTKLRV-FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG------------ 153
LF ++ F C+ ++N+++N + + G AL + + G
Sbjct: 145 VDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNL 204
Query: 154 ---EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG 210
G VD A ++F M PDV TY +++ G C A+ +EA LL EM G
Sbjct: 205 VIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDG 264
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
P+ VTFNV+++ LCK G + A++L+D M G PN YNTL+ G CL G++ +A
Sbjct: 265 CFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAI 324
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKN-KEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
L M S C V +Y +ING K + ++GA L M +G + +Y+TL
Sbjct: 325 SLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVL-ALMEERGYCVNEYVYSTLISG 383
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
LF+ + + A LF EM G +T Y IDGLC++ +AVE+ + C +
Sbjct: 384 LFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPN 443
Query: 390 IRAYNC 395
AY C
Sbjct: 444 --AYTC 447
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 182/349 (52%), Gaps = 23/349 (6%)
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 110
D+Y++ I+I C+ G + F +L + F+PN V +T+LI G C I +A LF
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLF 221
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQ 170
++ FG N +TY LI+GL++ G +GF E++ +
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNG------------------IKKQGF-----EMYEK 258
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M+++ + P++ TY V+ C +A L EM ++GV N+VT+N ++ LC+ K
Sbjct: 259 MQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+EA++++D M G+ PN YNTL+DGFC G++ +A L ++S G + ++ +Y+I
Sbjct: 319 ANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L++G+CK + GA + EM +GIKP + Y L + +E+A +L M+ G
Sbjct: 379 LVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELG 438
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ D TY I G C + EA LF+ + K E + YN ++ G
Sbjct: 439 LTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLG 487
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 190/381 (49%), Gaps = 27/381 (7%)
Query: 4 FDYMLNMRP---SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
FD ++ +R SP V ++ GC K + LF + GL + +TY +LI+
Sbjct: 183 FDLLVELREFGFSPNVVIYTTLIDGC-CKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIH 241
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
K G GF + ++ PN T+ ++ C + R +A LF ++R G
Sbjct: 242 GLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSC 301
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
N+ TYNTLI GL R EM + ++A ++ QMK + INP++
Sbjct: 302 NIVTYNTLIGGLCR------------EMKA-----------NEANKVMDQMKSDGINPNL 338
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+TY ++I GFC +A L ++ +G+ P++VT+N+++ CK G A +++
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKE 398
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M + G++P+ Y L+D F + +A +L ME +G T V +YS+LI+G+C +
Sbjct: 399 MEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQ 458
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ A L+ M++K ++P+ VIYNT+ + + RA +LF EM+ + + +YR
Sbjct: 459 MNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRY 518
Query: 361 FIDGLCKNSYIVEAVELFRTL 381
I+ LCK EA L +
Sbjct: 519 MIEVLCKERKSKEAEGLVEKM 539
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 169/333 (50%), Gaps = 23/333 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ +L L KN +++++ G+FP+LYTYN ++N CK GR F + +
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEM 294
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ N VT+ +LI GLC E + EA + +++ G PN+ TYNTLI+G
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGF------ 348
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
G G+ G KA L +K ++P +VTY ++ GFC D +
Sbjct: 349 -----------CGVGKLG------KALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSG 391
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A ++ EM ++G++P+ +T+ +++D + M++A +L M ++G+ P+ Y+ L+
Sbjct: 392 AGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIH 451
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
GFC+ G++N A LF M + Y+ ++ GYCK AL L+ EM K + P
Sbjct: 452 GFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPP 511
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
+V Y + VL + + + A L ++M G+
Sbjct: 512 NVASYRYMIEVLCKERKSKEAEGLVEKMIDTGI 544
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 106/218 (48%), Gaps = 1/218 (0%)
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I + + + + EM+D+G P FN ++ + + ++ R +
Sbjct: 97 YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFN-ES 155
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+I V + + + ++ G C G + ++ +L V + G + V Y+ LI+G CK EIE
Sbjct: 156 KIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIE 215
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ EM G+ + Y L LF+ ++ F+++++MQ DGV + +TY +
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ CK+ +A +LF +R +I YN LI GL
Sbjct: 276 NQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGL 313
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 195/384 (50%), Gaps = 14/384 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF M++M+ P + ++ G L K D S F+R+ +G PD TY +L++
Sbjct: 109 IFHQMIDMKVKPDAFL-YTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSL 167
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K + G + +L +P VT+ +++ G C RI +A +L +L+ G P+
Sbjct: 168 FKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSG 227
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV-----------EGFVDKAKELFLQM 171
Y+TLI+GL + A LFE MA+G+ + + G +D+AK + ++M
Sbjct: 228 SLYSTLIDGLCKHDRHDEARELFE-MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKM 286
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ PD V+Y +I C N +EAK L+ + M++ P V V++D LCK+ ++
Sbjct: 287 IEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRV 346
Query: 232 DEASRLLDLMIQIGVR-PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+EA +L+ M++ G R P+ Y+ ++DG C R++ A + M GC V +Y+
Sbjct: 347 EEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTA 406
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+I+ +CK ++ A L+ M +G DVV YN L +V+ A + +EM G
Sbjct: 407 IIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRG 466
Query: 351 VAADTWTYRTFIDGLCKNSYIVEA 374
+ + + T +DGLCK S + EA
Sbjct: 467 IQPNVVSLSTIVDGLCKESRVEEA 490
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 189/395 (47%), Gaps = 17/395 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ L K + ++L + + G+ P + T+ LI C++ + ++
Sbjct: 54 TYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQM 113
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ P+A +T +I LC +++ AA+ F ++ GC P+ TY L++ L++
Sbjct: 114 IDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKW 173
Query: 139 IVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
+FEEM S NG + G +D+A L ++K +P Y++
Sbjct: 174 EQGHQIFEEMLSKGHSPELVTYATVVNG-YCKAGRIDQALSLMRRLKGTGRSPSGSLYST 232
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I G C + +EA+ L EM VQ +V+ + + LCK GK+DEA + MI+ G
Sbjct: 233 LIDGLCKHDRHDEAR-ELFEMAAGDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAG 290
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
P+ YN ++ C RV+ AKEL C V ++L++G CK++ +E A
Sbjct: 291 CAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEAC 350
Query: 306 SLYGEMLSKGIK-PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
+ ML G + P VV Y+ + L + +++ A+ + +M+R G D TY ID
Sbjct: 351 VILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDA 410
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
CK + EA ELF+ + C LD+ AYN LI G
Sbjct: 411 FCKVGRLDEARELFQRMHERGCALDVVAYNILIRG 445
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 169/367 (46%), Gaps = 15/367 (4%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G + YT N L+ F G + V L + F P+ T+ +LI+G C +I +A
Sbjct: 12 GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GE 154
L +++ G P + T+ +LI L T AL +F +M G
Sbjct: 72 VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131
Query: 155 FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
+D A F +M PD VTYT ++ A W + + EM+ +G P
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 191
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
+VT+ +++ CK G++D+A L+ + G P+ +Y+TL+DG C R + A+ELF
Sbjct: 192 LVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFE 251
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
+ G V Y+ I+G CK +++ A +++ +M+ G PD V YN + L + +
Sbjct: 252 M--AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDN 309
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA-VELFRTLRILKCELDIRAY 393
+V A +L D+ +DGLCK+ + EA V L R L + Y
Sbjct: 310 RVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTY 369
Query: 394 NCLIDGL 400
+ +IDGL
Sbjct: 370 SAVIDGL 376
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 142/318 (44%), Gaps = 25/318 (7%)
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
R F N T SL++ + EA +F V P+ FTY TLI G +
Sbjct: 10 RPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIP 69
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
A+NL EM K I P +VT+ S+IR C N ++A
Sbjct: 70 QAVNLLGEM-----------------------KAAGITPTIVTFGSLIRKLCELNFTDKA 106
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
+ +M+D V+P+ + V++ LCK K+D A+ + M+Q G P+ Y L+
Sbjct: 107 LQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHS 166
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
+ + ++F M S G + + +Y+ ++NGYCK I+ ALSL + G P
Sbjct: 167 LFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPS 226
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
+Y+TL L + + + A +LF+ D D Y +FI GLCK + EA +
Sbjct: 227 GSLYSTLIDGLCKHDRHDEARELFEMAAGD--VQDVIVYTSFISGLCKAGKLDEAKAVHV 284
Query: 380 TLRILKCELDIRAYNCLI 397
+ C D +YN +I
Sbjct: 285 KMIEAGCAPDPVSYNVII 302
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
I + ML P V +++ + L K D + +++ G PD+ TY +I+ F
Sbjct: 352 ILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAF 411
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK+GR+ + R+ + V + LI+G C +++ EA A+ ++ G +PNV
Sbjct: 412 CKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNV 471
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEM 148
+ +T+++GL + A L E+M
Sbjct: 472 VSLSTIVDGLCKESRVEEARLLMEKM 497
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 198/400 (49%), Gaps = 20/400 (5%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++I+ CL +N D + + G+ P+ +TY LI C +G+ GF ++
Sbjct: 185 VVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVD 244
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++R + FT LI GLC ++EA +F ++ G EPN+ T L+ G G
Sbjct: 245 EMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKG 304
Query: 137 HTIVALNLFEEMASGNGEFGVE----------------GFVDKAKELFLQMKDENINPDV 180
+ +A LF+ + GE+G + G V A +F +M E + P++
Sbjct: 305 NVDMARELFDAI----GEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNI 360
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY S+I C A + + A ++ M G+ P++VT +++D LCK+ ++D+A L +
Sbjct: 361 VTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQ 420
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+++ G+ P+ + Y L+ G C + R+ A L M + +YS LI+G C++
Sbjct: 421 LVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGR 480
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
I A L EM KG PD + Y+ L L++ ++ A LF++M + G+ D Y
Sbjct: 481 ISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTI 540
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
IDG CK+ I EA+ LFR + + DI Y L + +
Sbjct: 541 MIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAV 580
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 205/401 (51%), Gaps = 20/401 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNST------GLF--PDLYTYNILINCFCKMGRVSH 70
S+ IL L +N + ++L + + G F ++ Y+I+I+C C+ G V
Sbjct: 144 SYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDE 203
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
GF ++ + PN T+ SLI+GLC + +E L ++ G + +V+ + LI+
Sbjct: 204 GFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLID 263
Query: 131 GLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINP 178
GL + G + A +F+EM + G + ++G VD A+ELF + +
Sbjct: 264 GLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKR 323
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
DV TY I G+C +A + EM +GV PN+VT+N ++D LCK G++ A ++
Sbjct: 324 DVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIV 383
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
M + G+ P+ L+DG C + R+++A LF + G T V+SY+ILI+G C +
Sbjct: 384 KTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTS 443
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+ + A++L +M K + P +V Y+ L L ++ A++L +EM G DT TY
Sbjct: 444 RRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITY 503
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+D L K ++ EAV LF + E D+ Y +IDG
Sbjct: 504 SILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDG 544
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 127/414 (30%), Positives = 201/414 (48%), Gaps = 23/414 (5%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN--CFCKM 65
+N S + FN CL K + T ++LF + N F + I CF +
Sbjct: 27 INSFHSHSSLAHFNKHLTCLMKTNQHSTAIALFNQ-NEYNNFITPCIITLTIIITCFFHL 85
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
G VS F + G+IL+ + + V +++KGLC +++A ++ G N +Y
Sbjct: 86 GHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSY 145
Query: 126 NTLINGLYRTGHTIVALNLFEEMASG-----NGEF---------------GVEGFVDKAK 165
LINGL G A+NL + +G F GFVD+
Sbjct: 146 GILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGF 205
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
E + +M + P+ TY S+IRG C + E L+ EM+ +G+ +V F V++D L
Sbjct: 206 EFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGL 265
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
CKNG + EA + D M+ G PN LM G+CL G V+ A+ELF ++ G V
Sbjct: 266 CKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDV 325
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
++Y++ I+GYCK + A+ ++ EM +G+ P++V YN+L L + +V A+++
Sbjct: 326 WTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKT 385
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
M R G+ D T +DGLCK+ + +A+ LF L D+ +Y LI G
Sbjct: 386 MHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHG 439
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 177/369 (47%), Gaps = 27/369 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+N R P + + L G + D LF + G D++TYN+ I+ +
Sbjct: 277 MFDEMVN-RGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGY 335
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK+GRV V + R PN VT+ SLI LC + A + + G P++
Sbjct: 336 CKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDI 395
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
T L++GL ++ +D+A LF Q+ + + PDV +
Sbjct: 396 VTCCILLDGLCKSKR-----------------------LDQAILLFNQLVESGLTPDVWS 432
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT +I G C + EA LL +M + + P++VT++ ++D LC++G++ A RLL+ M
Sbjct: 433 YTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMH 492
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G P+ Y+ L+D ++ A LF M G V Y+I+I+GYCK++ I+
Sbjct: 493 VKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERID 552
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A++L+ EM K + PD+V Y LF +F+ +K + ++ Y +
Sbjct: 553 EAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKY---L 609
Query: 363 DGLCKNSYI 371
LCK+ ++
Sbjct: 610 AALCKSEHL 618
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 8/168 (4%)
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+++ G + NT++ G C+ G V +A E + + G + SY ILING C+N
Sbjct: 98 ILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGR 157
Query: 301 IEGALSLYGEMLSKG--------IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
+ A++L + + +K +VV+Y+ + L V+ F+ ++EM +GV
Sbjct: 158 VNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVC 217
Query: 353 ADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +TY + I GLC +E L + ++ + + LIDGL
Sbjct: 218 PNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGL 265
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 182/361 (50%), Gaps = 12/361 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + L K + + LF + + PD TY +I C+ GRV +
Sbjct: 256 PDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKL 315
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ P+ VT+T+LI G C E ++ EA +L ++ G PN+ TY L +GL +
Sbjct: 316 FHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCK 375
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G A L EM E + G +D+A +L M+ +PD VT
Sbjct: 376 CGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVT 435
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+++ +C + + A LL +M+D+ +QP VVTFNV+M+ C +G +++ +LL M+
Sbjct: 436 YTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWML 495
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ PNA YN+L+ +C+ + E++ M + G +Y+ILI G+CK + ++
Sbjct: 496 EKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMK 555
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ +M+ KG V YN L ++ + A +LF++M+R+G+ AD Y F
Sbjct: 556 EAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFA 615
Query: 363 D 363
D
Sbjct: 616 D 616
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 122/378 (32%), Positives = 187/378 (49%), Gaps = 12/378 (3%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
+ VL L + + GL P+ YTYN +I CK G+V+ VL ++ P+ V +T+L
Sbjct: 205 EWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTL 264
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG 153
I G C + A LF +++ P+ TY +I GL +TG + A LF EM
Sbjct: 265 IDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRL 324
Query: 154 E------------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
E + EG + +A L QM + P++VTYT++ G C + + A
Sbjct: 325 EPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANE 384
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
LL EM +G++ N+ T+N +++ LCK G +D+A +L+ M G P+A Y TLMD +C
Sbjct: 385 LLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYC 444
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
+ + RA EL M TV ++++L+NG+C + +E L ML KGI P+
Sbjct: 445 KSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNAT 504
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
YN+L + + +++ M GV D TY I G CK + EA L R +
Sbjct: 505 TYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDM 564
Query: 382 RILKCELDIRAYNCLIDG 399
L + +YN LI G
Sbjct: 565 VGKGFNLTVSSYNALIKG 582
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 188/402 (46%), Gaps = 17/402 (4%)
Query: 10 MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS 69
++P+P ++N + L K + + + S G+ PD Y LI+ FCK+G VS
Sbjct: 219 LKPNP---YTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVS 275
Query: 70 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
+ + + + +P+ +T+T++I GLC R+MEA LF ++ EP+ TY LI
Sbjct: 276 SAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALI 335
Query: 130 NGLYRTGHTIVALNLFEEM-------------ASGNGEFGVEGFVDKAKELFLQMKDENI 176
+G + G A +L +M A +G G VD A EL +M + +
Sbjct: 336 DGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKC-GEVDTANELLHEMCRKGL 394
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
++ TY S++ G C A + ++A L+ +M G P+ VT+ +MD CK+ +M A
Sbjct: 395 ELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHE 454
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
LL M+ ++P +N LM+GFC++G + ++L M G +Y+ LI YC
Sbjct: 455 LLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYC 514
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
+ +Y M +KG+ PD YN L + ++ A+ L +M G
Sbjct: 515 IRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVS 574
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
+Y I G K +EA ELF +R D YN D
Sbjct: 575 SYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFAD 616
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 172/370 (46%), Gaps = 13/370 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M + SP + ++ G L + LF + L PD TY LI+ +
Sbjct: 280 LFDEMQKRKISPDFITYTAVICG-LCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGY 338
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G++ F + ++L+ TPN VT+T+L GLC + A L ++ G E N+
Sbjct: 339 CKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNI 398
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVD------------KAKELFLQ 170
+TYN+L+NGL + G+ A+ L ++M + +A EL Q
Sbjct: 399 YTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQ 458
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M D + P VVT+ ++ GFC + + + LL M+++G+ PN T+N ++ + C
Sbjct: 459 MLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNN 518
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
M + + M GV P+ YN L+ G C + A L M G TV SY+
Sbjct: 519 MRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNA 578
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI G+ K K+ A L+ +M +G+ D IYN + ++ ++E +L DE
Sbjct: 579 LIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKC 638
Query: 351 VAADTWTYRT 360
+ D T T
Sbjct: 639 LVGDIQTKNT 648
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 110/199 (55%)
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
L+ EM +G++PN T+N ++ LCK GK+ EA R+L MI G+ P+ +Y TL+DGFC
Sbjct: 210 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFC 269
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
G V+ A LF M+ + +Y+ +I G C+ + A L+ EM+ K ++PD V
Sbjct: 270 KLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEV 329
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
Y L + +++ AF L ++M + G+ + TY DGLCK + A EL +
Sbjct: 330 TYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEM 389
Query: 382 RILKCELDIRAYNCLIDGL 400
EL+I YN L++GL
Sbjct: 390 CRKGLELNIYTYNSLVNGL 408
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 7/209 (3%)
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNG-------KMDEASRLLDLMIQIGVRPNAF 251
A+ L +M++ G+ +V + N+ + L ++ K + +L++ M G++PN +
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
YN ++ C TG+V A+ + M S G Y+ LI+G+CK + A L+ EM
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
+ I PD + Y + L + +V A KLF EM + D TY IDG CK +
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344
Query: 372 VEAVELFRTLRILKCELDIRAYNCLIDGL 400
EA L + + +I Y L DGL
Sbjct: 345 KEAFSLHNQMLQMGLTPNIVTYTALADGL 373
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 187/392 (47%), Gaps = 13/392 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F L A+ D LSL + S L PD+ YN+ I+CF K G+V + +
Sbjct: 238 FTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMK 297
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+ + VT+TS+I LC R+ EA LF + P + YNT+I G G
Sbjct: 298 ANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFE 357
Query: 140 VALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
A +L E G +G VD+A + F +MK + I P++ TY +I
Sbjct: 358 DAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMI 416
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
C A A + M D G+ PNV+T N+++D LCK ++D+A + + + R
Sbjct: 417 DMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCR 476
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P+A Y +L++G GRV+ A +L+ M Y+ LI + K E +
Sbjct: 477 PDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKI 536
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
Y EML G PD+++ NT +F+ ++E+ LF E++ G D +Y I GL K
Sbjct: 537 YNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVK 596
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ EA ELF T++ C LD RAYN +IDG
Sbjct: 597 AGFAHEAYELFYTMKEQGCVLDTRAYNTVIDG 628
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 196/398 (49%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + NI+ L K + D S+F+ L+ PD TY LI + GRV + +
Sbjct: 442 PNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKL 501
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++L + PNAV +TSLI+ R + ++ ++ GC P++ NT ++ +++
Sbjct: 502 YEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFK 561
Query: 135 TGHTIVALNLFEEMAS-----GNGEFGV-------EGFVDKAKELFLQMKDENINPDVVT 182
G LF+E+ + + + GF +A ELF MK++ D
Sbjct: 562 AGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRA 621
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +VI GFC + N+A LL EM +G +P VVT+ ++D L K ++DEA L +
Sbjct: 622 YNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 681
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ N +Y++L+DGF GR++ A + + G T V++++ L++ K +EI
Sbjct: 682 SKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEIS 741
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL + M P+ + Y+ L L +I + +AF + EMQ+ G + +TY T I
Sbjct: 742 EALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMI 801
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GL K IVEA LF + D YN +I+GL
Sbjct: 802 SGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGL 839
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 190/400 (47%), Gaps = 25/400 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNIL---FGCLAK---NKHYDTVLSLFKRLNSTGLFPDLYT 54
+ +++ ML+ P V +++ F C K +K Y+ +L L G PDL
Sbjct: 499 YKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRL-------GCSPDLLL 551
Query: 55 YNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLR 114
N ++C K G + G + I F P+A ++T LI GL EA LF ++
Sbjct: 552 LNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMK 611
Query: 115 VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE-----FG--VEGF-----VD 162
GC + YNT+I+G ++G A L EEM + E +G ++G +D
Sbjct: 612 EQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLD 671
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
+A LF + K + I +VV Y+S+I GF +EA ++ E+M +G+ PNV T+N ++
Sbjct: 672 EAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLL 731
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
D L K ++ EA M + PN Y+ L+ G C + N+A + M+ G
Sbjct: 732 DALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFK 791
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
VF+Y+ +I+G K I A +L+ + KG D IYN + L ++ A++L
Sbjct: 792 PNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRL 851
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
F+E + G + T T +D L K I +A + LR
Sbjct: 852 FEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLR 891
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 157/375 (41%), Gaps = 43/375 (11%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFK---RLNSTGLFPDLYTYNILINCFCK 64
L++ P+P ++ G L + K + ++ F+ RL + Y +++
Sbjct: 91 LDLNPNP------ELVIGVLRRLKDVNNAVNYFRWAERLTDRAHCREAYNSLLMV----- 139
Query: 65 MGRVSHGFVVLGRILR----SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
M R + F L +IL + F P+ T ++ ++ EA +R P
Sbjct: 140 MAR-TRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRP 198
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
Y LI L + + L LF+ QM++ +V
Sbjct: 199 AFSAYTNLIGALSTSRDSDCMLTLFQ-----------------------QMQELGYAVNV 235
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+T++IR F + A LL EM ++P+VV +NV +D K GK+D A +
Sbjct: 236 HLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHE 295
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M G+ + Y +++ C R+N A ELF M+ ++Y+ +I GY +
Sbjct: 296 MKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGK 355
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
E A SL KG P VV YN + L QV+ A K F+EM++D + + TY
Sbjct: 356 FEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNI 414
Query: 361 FIDGLCKNSYIVEAV 375
ID LCK + A+
Sbjct: 415 MIDMLCKAGKLETAL 429
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/398 (31%), Positives = 201/398 (50%), Gaps = 16/398 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+++ + LAK L +F+ + S P L TYN+LIN C G + +
Sbjct: 12 AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71
Query: 79 LRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
R P+ T+ +LI GLC+ A L +++R NVFTY+++I L +
Sbjct: 72 KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131
Query: 138 TIVALNLFEEM-ASG--------NG---EFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
+ + EEM A+G NG F ++KA+E++ M + PD V+Y
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191
Query: 186 VIRGFCYANDWNEAKCLLIEMM--DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
+I G +E+ +L EM G PNV+TF+ ++ LC+ G++++A + M++
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G +PN + Y TL+ G C +V +A+ELF M +Y+ LI GYCK ++
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 311
Query: 304 ALSLYGEML-SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A LY EM G++P +V +NTL ++ ++ RA +L EM G+AADT TYR I
Sbjct: 312 AEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILI 371
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GL + + + EA+E+++ +R K LD + + GL
Sbjct: 372 AGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGL 409
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 188/384 (48%), Gaps = 16/384 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG-LFPDLYTYNILINCFCKMGRVSHGFV 73
P + ++N+L + L LF+ + + PD +TYN LI+ C G
Sbjct: 43 PSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARK 102
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L + N T++S+IK L E++ E+ + ++ GC P+VF +N ++ G
Sbjct: 103 LLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFA 162
Query: 134 RTGHTIVALNLFEEMA-SGNGEFGVE-----------GFVDKAKELF--LQMKDENINPD 179
R+ + A +++ M SG V G +D++ ++ + M+ P+
Sbjct: 163 RSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPN 222
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
V+T++++I G C + +A + M++ G +PN T+ ++ LC+ K+ +A L +
Sbjct: 223 VITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFE 282
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES-MGCTHTVFSYSILINGYCKN 298
M Q + P+A YN+L+ G+C G ++ A++L+ M G T+ +++ LI+G+CK
Sbjct: 283 KMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKL 342
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
++ A L EM +KG+ D Y L L +++ A +++ +M+ D +
Sbjct: 343 GKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSC 402
Query: 359 RTFIDGLCKNSYIVEAVELFRTLR 382
+F+ GLCK I +A +F R
Sbjct: 403 VSFVGGLCKTGNIDQAYAVFEATR 426
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 125/287 (43%), Gaps = 51/287 (17%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRL--NSTGLFPDLYTYNILIN 60
++ +M+ P V S++IL LAK D L + + + G P++ T++ LI+
Sbjct: 173 VYQHMVESGYKPDNV-SYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIH 231
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C+ G + V G +L + PN T+T+LI GLC ++++A LF K+ P
Sbjct: 232 GLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPP 291
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNG--------------------------- 153
+ YN+LI G + G A L+ EM+ G G
Sbjct: 292 DAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANEL 351
Query: 154 --EFGVEGF-------------------VDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
E G +G +D+A E++ QM+++ D V+ S + G C
Sbjct: 352 VAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCK 411
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
+ ++A + G PN TF ++ + L K G++++A +L++
Sbjct: 412 TGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLME 458
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 198/409 (48%), Gaps = 40/409 (9%)
Query: 31 KHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTF 90
K D L K + G+ P ++ YN+++ CK+ R+ + +++ PN VT+
Sbjct: 171 KDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTY 230
Query: 91 TSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNL------ 144
+LI G C I EA +++ E N+ TYN+L+NGL +G A +
Sbjct: 231 NTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEG 290
Query: 145 ------------FEEMASGNGEFGV----------------------EGFVDKAKELFLQ 170
F++ ++G G+ G+ G ++KA+E+ +
Sbjct: 291 SGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAK 350
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ + + P ++Y ++ +C D +A +M ++G++PN +TFN ++ + C+ G+
Sbjct: 351 LVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGE 410
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+D A + M++ GV P YN+L++G+ G R E M+ G V SY
Sbjct: 411 VDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGS 470
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LIN CK++++ A + +M+ +G+ P+ IYN L + +++ AF+ FDEM + G
Sbjct: 471 LINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSG 530
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ A TY T I+GL +N + +A +LF + C D+ YN LI G
Sbjct: 531 IDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISG 579
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 178/379 (46%), Gaps = 24/379 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ IL L + + + +L G+ P +YNIL+N +C+ G V + ++
Sbjct: 327 TYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQM 386
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PN +TF ++I C + A ++ G P V TYN+LING + GH
Sbjct: 387 EERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHF 446
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+ +EM DKA I P+V++Y S+I C +
Sbjct: 447 VRCFEFLDEM-------------DKA----------GIKPNVISYGSLINCLCKDRKLID 483
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A+ +L +M+ +GV PN +N++++ C K+ +A R D MIQ G+ YNTL++
Sbjct: 484 AEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLIN 543
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G GRV +A++LF+ M GC V +Y+ LI+GY K+ + L LY +M GIKP
Sbjct: 544 GLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKP 603
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
V ++ L + V K+F EM + + D + Y I ++ +++A+ L
Sbjct: 604 TVGTFHPLIYACRK-EGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLH 662
Query: 379 RTLRILKCELDIRAYNCLI 397
+ + + D YN LI
Sbjct: 663 QQMVDQGVDCDKVTYNSLI 681
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 178/384 (46%), Gaps = 39/384 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L + H+ ++ G+ P++ +Y LINC CK ++ +V
Sbjct: 428 PTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIV 487
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ +PNA + LI+ C+ S++ +A F ++ G + + TYNTLINGL R
Sbjct: 488 LADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGR 547
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G V KA++LFLQM + NPDV+TY S+I G YA
Sbjct: 548 NGR-----------------------VKKAEDLFLQMAGKGCNPDVITYNSLISG--YAK 582
Query: 195 DWNEAKCLLIEMMDQ----GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
N KCL E+ D+ G++P V TF+ ++ C+ + ++ M+Q+ + P+
Sbjct: 583 SVNTQKCL--ELYDKMKILGIKPTVGTFHPLI-YACRKEGVVTMDKMFQEMLQMDLVPDQ 639
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
FVYN ++ + G V +A L M G +Y+ LI Y +++ + L +
Sbjct: 640 FVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDD 699
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M +KG+ P V YN L L ++ A+ + EM G+ + I GL +
Sbjct: 700 MKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGM 759
Query: 371 IVEAVELFRTLRILKCELDIRAYN 394
+ EA +I+ EL I N
Sbjct: 760 LREA-------QIVSSELSIGGLN 776
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 174/411 (42%), Gaps = 52/411 (12%)
Query: 16 PVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVL 75
P S N+L+ C + +K D L+ + G P + N L+ V
Sbjct: 87 PFFSDNLLWLC-SVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVF 145
Query: 76 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRT 135
++ S P+AV + ++ + + L + G P+VF YN ++ GL +
Sbjct: 146 ADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKV 205
Query: 136 GHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
+ A++LF +M N+ P+ VTY ++I G+C
Sbjct: 206 RR-----------------------IKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGG 242
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV--- 252
EA M +Q V+ N+VT+N +++ LC +G++D+A +L M G P F+
Sbjct: 243 IEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFV 302
Query: 253 -------------------------YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
Y L++G C GR+ +A+E+ + G T + S
Sbjct: 303 FDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKIS 362
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y+IL+N YC+ +++ A+ +M +G++P+ + +NT+ E +V+ A M
Sbjct: 363 YNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMV 422
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
GV+ TY + I+G + + V E + + ++ +Y LI+
Sbjct: 423 EKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLIN 473
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 1/177 (0%)
Query: 225 LCKNGKM-DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
LC KM DEA+ L M + G P+ N L+ + + +F + G
Sbjct: 96 LCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRP 155
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
+Y + K+++ L M+ G+ P V YN + L ++ +++ A KLF
Sbjct: 156 DAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLF 215
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
DEM + + +T TY T IDG CK I EA+ ++ E ++ YN L++GL
Sbjct: 216 DEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGL 272
>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
Length = 581
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/332 (33%), Positives = 168/332 (50%), Gaps = 25/332 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ + R P V SFN++ + + L L +R+N G PD T+NI+++
Sbjct: 235 LFERWIQDRLYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGL 294
Query: 63 CKMGRVSHGFVVLGRILRSCF-TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
C+ VS G VL R+ R PN VTFTS+I G C ++ +A A++ + G PN
Sbjct: 295 CRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPN 354
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
TYN LING +G G + A E++ QM PDVV
Sbjct: 355 TVTYNVLING-----------------------YGKVGDLGSAVEVYQQMTRLRCPPDVV 391
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DL 240
T++S+I G+C ++A + +M +QPNV TF++I+ LCK + DEA RLL +L
Sbjct: 392 TFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNEL 451
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
++ + P AF+YN ++D C G+V+ A + ME GC ++Y+ILI GYC
Sbjct: 452 NLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSR 511
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
I A+ + EM+ G PD + N L +
Sbjct: 512 ISEAIMFFHEMVEAGCSPDSITVNCFISCLLK 543
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 177/370 (47%), Gaps = 26/370 (7%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRS-CFTPNAVTFTS 92
D +L + + G + Y YN L++ GRV + R ++ ++P+ +F
Sbjct: 195 DASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNV 254
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN 152
+IKG+C ++ +A L ++ FGC P+ T+N +++GL RT
Sbjct: 255 VIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNE--------------- 299
Query: 153 GEFGVEGFVDKAKELFLQMKDENI-NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
V + E+ +++ + + P+VVT+TSVI G+C A +A + +M+ G+
Sbjct: 300 --------VSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGI 351
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
PN VT+NV+++ K G + A + M ++ P+ +++L+DG+C G+++ A
Sbjct: 352 MPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALR 411
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM-LSKGIKPDVVIYNTLFVVL 330
++ M V+++SI+I+ CK + A+ L E+ L I P IYN + VL
Sbjct: 412 IWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVL 471
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
+ +V+ A + M+ G D +TY I G C S I EA+ F + C D
Sbjct: 472 CKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDS 531
Query: 391 RAYNCLIDGL 400
NC I L
Sbjct: 532 ITVNCFISCL 541
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 186/384 (48%), Gaps = 20/384 (5%)
Query: 35 TVLSLFKRLNSTGL--FPDLYTYNILINCFCKMGRVSHGFVVLGRILRS-CFTPNAVTFT 91
+ L++F L+ + L P ++ +I C+ GR + + ++ ++P+A F
Sbjct: 123 SALAVFTALHCSPLSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDA-RFL 181
Query: 92 SLIKGLCAESRIMEAAA-LFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS 150
S + C + +++A+A L +K FGC + YN L++ L G + LFE
Sbjct: 182 SFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQ 241
Query: 151 GN------GEFGVE-------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
F V G V KA EL +M + +PD VT+ ++ G C N+ +
Sbjct: 242 DRLYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVS 301
Query: 198 EAKCLLIEMMDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+L + GV PNVVTF ++ CK GK+++A + + M+ G+ PN YN L
Sbjct: 302 RGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVL 361
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
++G+ G + A E++ M + C V ++S LI+GYC+ +++ AL ++ +M I
Sbjct: 362 INGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRI 421
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ-RDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+P+V ++ + L + ++ + A +L +E+ R +A + Y ID LCK + EA
Sbjct: 422 QPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEAN 481
Query: 376 ELFRTLRILKCELDIRAYNCLIDG 399
+ + + C D Y LI G
Sbjct: 482 LIRKGMEEKGCRPDKYTYTILIIG 505
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 153/320 (47%), Gaps = 21/320 (6%)
Query: 98 CAESRIMEAAALFTKLRV--FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG-- 153
CA S A A+FT L P+ + +I L R+G AL LF++M + G
Sbjct: 120 CASS----ALAVFTALHCSPLSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYS 175
Query: 154 ------EFGVEG-----FVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
F V +D + L + + + Y ++ ++ L
Sbjct: 176 PDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVAL 235
Query: 203 LIE-MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
+ D+ P+V +FNV++ +C+ G++ +A L++ M + G P+ +N ++DG C
Sbjct: 236 FERWIQDRLYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLC 295
Query: 262 LTGRVNRAKELFVSMESMG-CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
T V+R E+ ++ G C V +++ +I+GYCK ++E A+++Y +M++ GI P+
Sbjct: 296 RTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNT 355
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
V YN L ++ + A +++ +M R D T+ + IDG C+ + +A+ ++
Sbjct: 356 VTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSD 415
Query: 381 LRILKCELDIRAYNCLIDGL 400
+ + + ++ ++ +I L
Sbjct: 416 MAQHRIQPNVYTFSIIIHSL 435
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 118/240 (49%), Gaps = 15/240 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +F + K + ++++ + ++G+ P+ TYN+LIN + K+G + V
Sbjct: 318 PNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEV 377
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ R P+ VTF+SLI G C ++ +A +++ + +PNV+T++ +I+ L +
Sbjct: 378 YQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCK 437
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF--------------VDKAKELFLQMKDENINPDV 180
+ A+ L E+ + + + F VD+A + M+++ PD
Sbjct: 438 QNRSDEAIRLLNEL-NLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDK 496
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
TYT +I G+C + +EA EM++ G P+ +T N + L K G +E ++ L
Sbjct: 497 YTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVMRL 556
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 187/375 (49%), Gaps = 13/375 (3%)
Query: 39 LFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 98
LF+ + G+ PD +Y +++ +CK+G + L +L F + TFT +I
Sbjct: 192 LFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFS 251
Query: 99 AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV- 157
+ A F +L G EPN+ + +I GL + G A + EEM + V
Sbjct: 252 GKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVY 311
Query: 158 -----------EGFVDKAKELFLQM-KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
+G+ +KA LFL++ + EN P+V+TYT++I G+C + N A+ LL
Sbjct: 312 THTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSR 371
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M +QG+ PN T+ ++D CK G + A L++LM G PN YN +++G C GR
Sbjct: 372 MKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGR 431
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
V A ++ G F+Y+IL++ +CK + I AL+L+ +ML GI+PD+ Y T
Sbjct: 432 VQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTT 491
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L V ++++ + F+E R G+ TY + I G C+ + A++ F L
Sbjct: 492 LIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHG 551
Query: 386 CELDIRAYNCLIDGL 400
C D Y +I GL
Sbjct: 552 CAPDSITYGAIISGL 566
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 167/366 (45%), Gaps = 21/366 (5%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+F ++ + + L F+RL GL P+L + +I CK G + F +L +
Sbjct: 242 TFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEM 301
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPNVFTYNTLINGLYRTGH 137
+ + PN T TSLI GLC + +A LF KL R +PNV TY +I+G R
Sbjct: 302 VGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRED- 360
Query: 138 TIVALNLFEEMASGNGEFGV----------------EGFVDKAKELFLQMKDENINPDVV 181
LN E + S E G+ G ++A +L M E +P++
Sbjct: 361 ---KLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLC 417
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY +++ G C EA +L + G++P+ T+N++M E CK + +A L + M
Sbjct: 418 TYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKM 477
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++IG++P+ Y TL+ FC R+ ++ F +G T +Y+ +I GYC+ +
Sbjct: 478 LKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNL 537
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A+ + + G PD + Y + L + + + A L+D M G+ T T
Sbjct: 538 TLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITL 597
Query: 362 IDGLCK 367
CK
Sbjct: 598 AYEYCK 603
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 167/353 (47%), Gaps = 13/353 (3%)
Query: 58 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 117
++ F ++GR+ ++ + PN T +IK + A LF ++ V G
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200
Query: 118 CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAK 165
+P+ +Y ++ + G+ + A M F +G+ +A
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
F ++ D + P+++ +T +I G C +A +L EM+ +G +PNV T ++D L
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320
Query: 226 CKNGKMDEASRL-LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
CK G ++A RL L L+ +PN Y ++ G+C ++NRA+ L M+ G
Sbjct: 321 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPN 380
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
+Y+ LI+G+CK E A L M S+G P++ YN + L + +V+ A+K+ +
Sbjct: 381 TNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLE 440
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ ++G+ D +TY + CK I +A+ LF + + + DI +Y LI
Sbjct: 441 DGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLI 493
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 117/273 (42%), Gaps = 12/273 (4%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F ++ P V ++ + + + L R+ GL P+ TY LI+
Sbjct: 330 FRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLID 389
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK G + ++ + F+PN T+ +++ GLC R+ EA + G +P
Sbjct: 390 GHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKP 449
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVD-----------KAKELFL 169
+ FTYN L++ + + AL LF +M + + + K E+F
Sbjct: 450 DKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFF 509
Query: 170 QMKDE-NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+ I P TYTS+I G+C + A + D G P+ +T+ I+ LCK
Sbjct: 510 EEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQ 569
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
K DEA L D MI+ G+ P TL +C
Sbjct: 570 SKRDEARSLYDSMIEKGLVPCEVTRITLAYEYC 602
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 136/309 (44%), Gaps = 24/309 (7%)
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN 152
+++ R+ EA + ++ G PN T N +I + EM
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIK-------------VTSEM---- 183
Query: 153 GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
G V+ A+ LF +M + PD ++Y ++ +C + EA L M+++G
Sbjct: 184 ------GLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFV 237
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
+ TF +I+ G A ++ +G+ PN + +++G C G + +A E+
Sbjct: 238 VDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEM 297
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML-SKGIKPDVVIYNTLFVVLF 331
M G V++++ LI+G CK E A L+ +++ S+ KP+V+ Y +
Sbjct: 298 LEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYC 357
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIR 391
++ RA L M+ G+ +T TY T IDG CK A +L + ++
Sbjct: 358 REDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLC 417
Query: 392 AYNCLIDGL 400
YN +++GL
Sbjct: 418 TYNAIVNGL 426
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%)
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
V +++ F GR+ A E+ + M + G + + +I + +E A L+ EM
Sbjct: 137 VMRCMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEM 196
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
+G++PD + Y + V+ +I + A K M G D T+ I Y
Sbjct: 197 CVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYT 256
Query: 372 VEAVELFRTLRILKCELDIRAYNCLIDGL 400
A+ FR L + E ++ + C+I+GL
Sbjct: 257 TRALWYFRRLVDMGLEPNLINFTCMIEGL 285
>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 196/389 (50%), Gaps = 14/389 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P SFN++ L + + D + +F+ ++ D YTY+ L++ C GR+ +
Sbjct: 173 PNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSL 232
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + PN V F LI LC + + A+ L + + GC PN TYN+L++GL
Sbjct: 233 LDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCL 292
Query: 135 TGHTIVALNLFEEMASG-----NGEFG--VEGFVDKAKEL-----FLQMKDENINPDVVT 182
G A++L M + + FG V+GFV + L + ++++ + +
Sbjct: 293 KGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFS 352
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+S+I G L EM+++G +PN + ++ ++D LC+ GK DEA L M
Sbjct: 353 YSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMK 412
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G PN+F Y++LM G+ G +++A ++ M C H YSILING CKN +++
Sbjct: 413 NKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLK 472
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM--QRDGVAADTWTYRT 360
AL ++ +MLS+GIK DVV Y+++ VE+ KLF++M + D TY
Sbjct: 473 EALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNI 532
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELD 389
++ C + + A+++ T+ C+ D
Sbjct: 533 LLNAFCTKNSVSRAIDILNTMLDQGCDPD 561
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 159/322 (49%), Gaps = 15/322 (4%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P PV +FN+L L K L + G P+ TYN L++ C G++
Sbjct: 243 PNPV-AFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMS 301
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L R++ + PN +TF +L+ G R ++ + L G N F+Y++LI+GL+
Sbjct: 302 LLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLF 361
Query: 134 RTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVV 181
+ G + L++EM + EG D+AKE ++MK++ P+
Sbjct: 362 KEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSF 421
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY+S++ G+ A D ++A + EM D + V ++++++ LCKNGK+ EA + M
Sbjct: 422 TYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQM 481
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM--ESMGCTHTVFSYSILINGYCKNK 299
+ G++ + Y++++ GFC V + +LF M + V +Y+IL+N +C
Sbjct: 482 LSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKN 541
Query: 300 EIEGALSLYGEMLSKGIKPDVV 321
+ A+ + ML +G PD +
Sbjct: 542 SVSRAIDILNTMLDQGCDPDFI 563
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 183/421 (43%), Gaps = 63/421 (14%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNST-GLFPDLYTYNILINCFCKMGRVSHGFVVLGR 77
SF I+F K L LF R+ + + ++N ++N + G
Sbjct: 102 SFIIMFKAYGKAHLPQKALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNH 161
Query: 78 ILRSC----FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
++ S PN ++F +IK LC + +A +F + C + +TY+TL++GL
Sbjct: 162 VIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLC 221
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
EG +D+A L +M+ E P+ V + +I C
Sbjct: 222 N-----------------------EGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKK 258
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
D + A L+ M +G PN VT+N ++ LC GK+D+A LL+ M+ PN +
Sbjct: 259 GDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITF 318
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
TL+DGF GR + VS+E G FSYS LI+G K + E + L+ EM+
Sbjct: 319 GTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVE 378
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT------------- 360
KG KP+ ++Y+ L L + + A + EM+ G +++TY +
Sbjct: 379 KGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHK 438
Query: 361 ----------------------FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
I+GLCKN + EA+ +++ + +LD+ AY+ +I
Sbjct: 439 AILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIH 498
Query: 399 G 399
G
Sbjct: 499 G 499
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 128/286 (44%), Gaps = 35/286 (12%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S++ L L K + + L+K + G P+ Y+ LI+ C+ G+ L +
Sbjct: 352 SYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEM 411
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
TPN+ T++SL+ G I +A ++ ++ C + Y+ LINGL + G
Sbjct: 412 KNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKL 471
Query: 139 IVALNLFEEMASGNGEFGV-------EGF-----VDKAKELFLQM--KDENINPDVVTYT 184
AL ++++M S + V GF V++ +LF QM + + PDVVTY
Sbjct: 472 KEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYN 531
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN------GK--MDE--- 233
++ FC N + A +L M+DQG P+ +T ++ + L N G+ +DE
Sbjct: 532 ILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQDGREFLDELVV 591
Query: 234 ----------ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
AS ++++M+Q + P + + C +V +
Sbjct: 592 RLIKRQRTVGASNIIEVMLQKFLLPKPSTWALAVQQLCKPMKVRKT 637
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 186/386 (48%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + K + + R+ + G PD+ TYNI+I C ++ V
Sbjct: 135 PDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKV 194
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++L P +T+T LI+ E I EA L ++ G P+++TYN +I G+ +
Sbjct: 195 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 254
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
EG V++A EL + + PDV++Y ++R F
Sbjct: 255 -----------------------EGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQG 291
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
W+E + L+ EM +G +PN VT+++++ LC+ G++DEA +L +MI+ + P+ + Y+
Sbjct: 292 KWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYD 351
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ C GR++ A + M S GC + +Y+ ++ CKN AL ++ ++
Sbjct: 352 PLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGM 411
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G P+V YNT+ L+ RA + M GV D TY + I LC++ + EA
Sbjct: 412 GCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEA 471
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ L + + +YN ++ GL
Sbjct: 472 IGLLDDMEQSGFRPTVISYNIVLLGL 497
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 176/379 (46%), Gaps = 12/379 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++NI+ G L + L + +L P + TY ILI G ++ +
Sbjct: 170 PDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKL 229
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L P+ T+ ++I+G+C E + AA L T L GC+P+V +YN L+
Sbjct: 230 LEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLN 289
Query: 135 TGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKDENINPDVVT 182
G L EM S E G +D+A + M ++ + PD +
Sbjct: 290 QGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYS 349
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I C + A ++ M+ G P++V +N I+ LCKNG ++A + + +
Sbjct: 350 YDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLR 409
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+G PN YNT++ G +RA + +M S G +Y+ LI+ C++ +E
Sbjct: 410 GMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVE 469
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ L +M G +P V+ YN + + L ++ +++ A +F EM G + TY I
Sbjct: 470 EAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLI 529
Query: 363 DGLCKNSYIVEAVELFRTL 381
+G+ + EA+EL +L
Sbjct: 530 EGIGFAGWRTEAMELANSL 548
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 170/355 (47%), Gaps = 13/355 (3%)
Query: 58 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 117
L+N CK G+ + L ++ +TP+ + T LIKG I +A+ + L
Sbjct: 74 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESH- 132
Query: 118 CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAK 165
EP+VF YN +I+G + A + M + G + A
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
++ Q+ +N P V+TYT +I NEA LL EM+ +G+ P++ T+N I+ +
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
CK G ++ A+ L+ + G +P+ YN L+ F G+ + ++L M S GC
Sbjct: 253 CKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 312
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
+YSILI+ C+ I+ A+S+ M+ K + PD Y+ L L + +++ A + D
Sbjct: 313 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 372
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
M +G D Y T + LCKN +A+E+F LR + C ++ +YN +I L
Sbjct: 373 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISAL 427
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 127/266 (47%), Gaps = 23/266 (8%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P +++IL L + D +S+ K + L PD Y+Y+ LI+ CK GR+
Sbjct: 306 RGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDL 365
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
++ ++ + P+ V + +++ LC +A +F KLR GC PNV +YNT+I+
Sbjct: 366 AIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMIS 425
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
L+ G AL + M S + ++PD +TY S+I
Sbjct: 426 ALWSCGDRSRALGMVPAMIS-----------------------KGVDPDEITYNSLISCL 462
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C EA LL +M G +P V+++N+++ LCK ++D+A + MI+ G RPN
Sbjct: 463 CRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNE 522
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSM 276
Y L++G G A EL S+
Sbjct: 523 TTYILLIEGIGFAGWRTEAMELANSL 548
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 188/379 (49%), Gaps = 20/379 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V SFNIL G + + + +K + G+ PD+ +++ LI F G++ H
Sbjct: 260 PDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAY 319
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P+ V +T +I G C + EA + ++ GC P+V TYNTL+NGL +
Sbjct: 320 LREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCK 379
Query: 135 TGHTIVALNLFEEMASGNGEFGV----------------EGFVDKAKELFLQMKDENINP 178
+ A L EM E GV +G +KA +LF + + + P
Sbjct: 380 QHRLLDAEELLNEMK----ERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRP 435
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
DVV Y S+I G C D +A L +M + + PN VT+++++D C+ G+++EA L
Sbjct: 436 DVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFL 495
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
D M+ G PN YN+++ G+C +G V + ++ M + +++ LI+GY K
Sbjct: 496 DEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKE 555
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+ + GA +++ M + ++PD V YN + E +E A ++F +M G+ D +TY
Sbjct: 556 ENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTY 615
Query: 359 RTFIDGLCKNSYIVEAVEL 377
+ I+G EA +L
Sbjct: 616 MSLINGHVTAGNSKEAFQL 634
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 189/385 (49%), Gaps = 23/385 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +FN + L K++ +D +F+ ++ + PD+ ++NILI FC++G V
Sbjct: 225 PGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKF 284
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + TP+ V+F+ LI ++ AAA +++ G P+ Y +I G R
Sbjct: 285 YKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCR 344
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G AL + +EM G G PDVVTY +++ G C +
Sbjct: 345 AGSMSEALRVRDEMV-GLGCL----------------------PDVVTYNTLLNGLCKQH 381
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+A+ LL EM ++GV P++ TF ++ C++G ++A +L D ++ +RP+ YN
Sbjct: 382 RLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYN 441
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L+DG C G + +A EL+ M + +YSILI+ +C+ ++E A EM+SK
Sbjct: 442 SLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSK 501
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G P+++ YN++ V++ + +M +D + D T+ T I G K + A
Sbjct: 502 GNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGA 561
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+F + + D YN +I+G
Sbjct: 562 FNVFNIMEKEMVQPDAVTYNMIING 586
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 160/323 (49%), Gaps = 23/323 (7%)
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
+L S NA T ++ C +A + +++ P+V T+N LI+ +R G
Sbjct: 148 VLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGD 207
Query: 138 TIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
A+ L + MA ++ + P +VT+ SV++G C ++
Sbjct: 208 VDAAIALVDSMA-----------------------NKGLKPGIVTFNSVLKGLCKHRRFD 244
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
+AK + M V P+V +FN+++ C+ G+++EA + M Q GV P+ ++ L+
Sbjct: 245 KAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLI 304
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
F G+++ A M+ +G Y+++I G+C+ + AL + EM+ G
Sbjct: 305 GLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCL 364
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
PDVV YNTL L + H++ A +L +EM+ GV D T+ T I G C++ +A++L
Sbjct: 365 PDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQL 424
Query: 378 FRTLRILKCELDIRAYNCLIDGL 400
F TL + D+ AYN LIDG+
Sbjct: 425 FDTLLHQRLRPDVVAYNSLIDGM 447
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 164/359 (45%), Gaps = 47/359 (13%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P V SF+ L G + D + + + GL PD Y ++I FC+ G
Sbjct: 288 MQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGS 347
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+S V ++ P+ VT+ +L+ GLC + R+++A L +++ G P++ T+ T
Sbjct: 348 MSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTT 407
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMK--- 172
LI+G R G+ AL LF+ + V +G + KA EL+ M
Sbjct: 408 LIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHARE 467
Query: 173 ----------------------------DENIN----PDVVTYTSVIRGFCYANDWNEAK 200
DE ++ P+++TY S+I+G+C + + + +
Sbjct: 468 IFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQ 527
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
L +MM + P+++TFN ++ K M A + ++M + V+P+A YN +++GF
Sbjct: 528 QFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGF 587
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
G + A +F M + G ++Y LING+ + A L+ EM+ +G PD
Sbjct: 588 SEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/416 (30%), Positives = 197/416 (47%), Gaps = 57/416 (13%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRL---NSTGLFPDLYTYNILINCFCKMGRVSHGFVVL 75
S+N L CL++ D ++SL+K + N +FP+L T N ++N +CK+G ++ +
Sbjct: 153 SYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFF 212
Query: 76 GRILRS-----------------------------CFTP--NAVTFTSLIKGLCAESRIM 104
RILR C P NAV++T+LI GLC ++
Sbjct: 213 VRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAVSYTNLIHGLCEAGKLH 272
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKA 164
EA + ++R GC P V TY L+ L +G + AL+LF E
Sbjct: 273 EALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGE----------------- 315
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
M++ P+V TYT +I C +EA +L EM+++GV P+VV FN ++
Sbjct: 316 ------MRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGS 369
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
CK G M++A +L LM V PN YN L+ GFC ++RA L M +
Sbjct: 370 YCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPD 429
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
V +Y+ LI+G C+ ++ A L+ M+ G PD +N V L + +V A ++ +
Sbjct: 430 VVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILE 489
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++ V A+ Y IDG CK I A LF+ + +C + +N +IDGL
Sbjct: 490 SLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGL 545
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 180/385 (46%), Gaps = 23/385 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ +L L ++ LSLF + G P++YTY +LI+ CK GR+ +
Sbjct: 288 PTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKM 347
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+ V F +LI C + +A + + PNV TYN LI G R
Sbjct: 348 LNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCR 407
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G ++ D+A L +M + ++PDVVTY ++I G C
Sbjct: 408 -GKSM----------------------DRAMALLNKMVESKLSPDVVTYNTLIHGLCEVG 444
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ A L M+ G P+ TFN M LC+ G++ EA ++L+ + + V+ N Y
Sbjct: 445 VVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYT 504
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DG+C G++ A LF M + C +++++I+G K +++ A+ L +M
Sbjct: 505 ALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKF 564
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
+KP + YN L + + + +RA ++ + + G + TY FI C + EA
Sbjct: 565 DVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEA 624
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
E+ ++ LD YN LI+
Sbjct: 625 EEMVIKIKNEGVLLDSFIYNLLINA 649
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/462 (25%), Positives = 188/462 (40%), Gaps = 76/462 (16%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L + D+ LF+ + G PD +T+N + C C+MGRV +
Sbjct: 428 PDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQI 487
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + N +T+LI G C +I AA+LF ++ C PN T+N +I+GL +
Sbjct: 488 LESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRK 547
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
G A+ L E+MA + + + + D+A E+ ++ P+VVT
Sbjct: 548 EGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVT 607
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+ I+ +C EA+ ++I++ ++GV + +N++++ G +D A +L M
Sbjct: 608 YTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMF 667
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKE-----------------------------LF 273
G P+ Y+ LM + LF
Sbjct: 668 GTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLF 727
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV---- 329
M GC + +YS LING CK + A SLY M GI P +I+N+L
Sbjct: 728 EKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKL 787
Query: 330 -------------------------------LFEIHQVERAFKLFDEMQRDGVAADTWTY 358
LFE E+A +F + R G D +
Sbjct: 788 GMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAW 847
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ IDGL K Y+ + EL + C L Y+ L+ L
Sbjct: 848 KVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQEL 889
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/429 (29%), Positives = 204/429 (47%), Gaps = 43/429 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDL--YT------------------ 54
P V ++NIL L KN D L +++ G PD+ YT
Sbjct: 182 PNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL 241
Query: 55 ----------YNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 104
YN LIN FC+ +V F++LG+++ PN +T++++I L +
Sbjct: 242 SIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVE 301
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------- 157
A A++ K+ V GC PNV+T+ +L+ G + G + ALN++ MA E V
Sbjct: 302 LALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLI 361
Query: 158 -----EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
G + +A + +M+ +P+V TY ++I GF A D A + +MM G
Sbjct: 362 HGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCI 421
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
PNVV + +++ LC++ +A L++ M PN +NT + G C +GRV A L
Sbjct: 422 PNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINL 481
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
F ME GC+ + +Y+ +++G K I+ AL L EM KG++ ++V YNT+F
Sbjct: 482 FCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCN 541
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI-LKCELDIR 391
+ + E A KL +M GV D TY T C + A++L L K ++
Sbjct: 542 VGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVA 601
Query: 392 AYNCLIDGL 400
AY L+ G+
Sbjct: 602 AYTSLLWGI 610
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 189/389 (48%), Gaps = 34/389 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N L + + + ++ + G P++YTYNIL+ CK RV +
Sbjct: 147 PTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKL 206
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P+ V++T++I + ++ EA L + +PNV YN LING R
Sbjct: 207 LVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRF-----QPNVSVYNALINGFCR 261
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL---QMKDENINPDVVTYTSVIRGFC 191
E+ K KE+FL QM ++ I+P+V+TY++VI
Sbjct: 262 -------------------EY-------KVKEVFLLLGQMVEKGIDPNVITYSTVISSLS 295
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
+ A + +M +G PNV TF +M G++ EA + + M + G PN
Sbjct: 296 GIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVV 355
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
YNTL+ G C G++ A + ME GC+ V +Y LI+G+ K ++ GA ++ +M
Sbjct: 356 AYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKM 415
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
++ G P+VV+Y ++ VL +A+ L ++M D +T T+ TFI GLC + +
Sbjct: 416 MTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRV 475
Query: 372 VEAVELFRTLRILKCELDIRAYNCLIDGL 400
A+ LF + C +I+ YN ++DGL
Sbjct: 476 ECAINLFCQMEQYGCSPNIKTYNEVLDGL 504
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 172/365 (47%), Gaps = 15/365 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ + L+ + + L+++ ++ G P++YT+ L+ + GRV +
Sbjct: 282 PNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNI 341
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R+ F PN V + +LI GLC+ ++ EA ++ +K+ GC PNV TY LI+G +
Sbjct: 342 WNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAK 401
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G + A ++ +M + V +A L +M +N P+ VT
Sbjct: 402 AGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVT 461
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ + I+G C + A L +M G PN+ T+N ++D L K ++ EA L+ M
Sbjct: 462 FNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEME 521
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ N YNT+ GFC G+ A +L M G +Y+ L YC +++
Sbjct: 522 EKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVK 581
Query: 303 GALSLYGEMLSKGIK--PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
A+ L + LS G K P+V Y +L + VE A D+M +G+ + T+
Sbjct: 582 TAIQLL-DKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNA 640
Query: 361 FIDGL 365
+ GL
Sbjct: 641 LVRGL 645
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 165/335 (49%), Gaps = 13/335 (3%)
Query: 10 MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS 69
+R P V +F L L+++ R+ G P++ YN LI+ C G++
Sbjct: 312 VRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMG 371
Query: 70 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
V ++ R+ +PN T+ +LI G ++ A+ ++ K+ GC PNV Y +++
Sbjct: 372 EAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMV 431
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENIN 177
N L R+ A +L E+M++ N G V+ A LF QM+ +
Sbjct: 432 NVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCS 491
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P++ TY V+ G N EA L+ EM ++G++ N+VT+N I C GK +EA +L
Sbjct: 492 PNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKL 551
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG-CTHTVFSYSILINGYC 296
L M+ GV+P+A YNTL +C+ G+V A +L + + G V +Y+ L+ G C
Sbjct: 552 LGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGIC 611
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
+E A+ +ML++GI + +N L LF
Sbjct: 612 NQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLF 646
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 123/277 (44%), Gaps = 30/277 (10%)
Query: 154 EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
+ G E VD + L QMK E I+ + +VI + +A + + + G QP
Sbjct: 88 KLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQP 147
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
V +N ++D + + + M + G PN + YN L+ C RV+ A +L
Sbjct: 148 TVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLL 207
Query: 274 VSMESMGCTHTVFSYSI------------------------------LINGYCKNKEIEG 303
V M + GC V SY+ LING+C+ +++
Sbjct: 208 VEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSVYNALINGFCREYKVKE 267
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
L G+M+ KGI P+V+ Y+T+ L I VE A ++ +M G + + +T+ + +
Sbjct: 268 VFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMK 327
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G ++EA+ ++ + E ++ AYN LI GL
Sbjct: 328 GYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGL 364
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 104/220 (47%), Gaps = 5/220 (2%)
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+TY +I D + + LL +M +G+ + F +++ + G ++A ++
Sbjct: 80 LTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYR 139
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+ + G +P +YN L+D R + ++ +M+ G V++Y+IL+ CKN
Sbjct: 140 IREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNR 199
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
++GA L EM +KG +PDVV Y T+ + ++ +VE A +L Q + Y
Sbjct: 200 VDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQ-----PNVSVYNA 254
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I+G C+ + E L + + ++ Y+ +I L
Sbjct: 255 LINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSL 294
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 5/192 (2%)
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+ Q +T+ +++++L + +D LL M G+ + ++ +++ + G
Sbjct: 72 SKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAE 131
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
+A ++F + GC TV Y+ L++ + +Y M G +P+V YN L
Sbjct: 132 QALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILL 191
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
L + ++V+ A KL EM G D +Y T I + K + EA EL ++ +
Sbjct: 192 KALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELS-----IRFQ 246
Query: 388 LDIRAYNCLIDG 399
++ YN LI+G
Sbjct: 247 PNVSVYNALING 258
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N +FG ++ L L ++ G+ PD TYN L +C G+V +L ++
Sbjct: 531 TYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKL 590
Query: 79 LRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRT-G 136
+ P +TSL+ G+C + + EA K+ G N T+N L+ GL+ + G
Sbjct: 591 SAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNSLG 650
Query: 137 H 137
H
Sbjct: 651 H 651
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 188/376 (50%), Gaps = 13/376 (3%)
Query: 38 SLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 97
+LF + + G+ P+ +Y +++ +CK+G V LG ++ F + T + +++
Sbjct: 188 NLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREF 247
Query: 98 CAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV 157
C + + A F + G PN+ + +I GL + G A + EEM + V
Sbjct: 248 CEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNV 307
Query: 158 ------------EGFVDKAKELFLQM-KDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
+G+ +KA LFL++ + EN P+V+TYT++I G+C N A+ LL
Sbjct: 308 YTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLS 367
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
M +QG+ PN T+ ++D CK G + A L+++M + G PN YN ++DG C G
Sbjct: 368 RMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKG 427
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
RV A ++ S G +Y+ILI+ +CK EI+ AL L+ +M+ GI+PD+ Y
Sbjct: 428 RVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYT 487
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
TL V +++ + F+E R G+ TY + I G C+ + A++ F +
Sbjct: 488 TLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDH 547
Query: 385 KCELDIRAYNCLIDGL 400
C D Y LI GL
Sbjct: 548 GCASDSITYGALISGL 563
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 166/347 (47%), Gaps = 24/347 (6%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 95
L F+R GL P+L + +I CK G V F +L ++ + PN T T+LI
Sbjct: 256 ALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALID 315
Query: 96 GLCAESRIMEAAALFTKL-RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE 154
GLC + +A LF KL R +PNV TY +I+G R E+M
Sbjct: 316 GLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRD----------EKM------ 359
Query: 155 FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
++A+ L +MK++ + P+ TYT++I G C A ++ A L+ M ++G PN
Sbjct: 360 -------NRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPN 412
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
V T+N I+D LCK G++ EA ++L + G+ + Y L+ C + +A LF
Sbjct: 413 VCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFN 472
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
M G + SY+ LI +C+ K ++ + + E + G+ P Y ++
Sbjct: 473 KMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREG 532
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+ A K F M G A+D+ TY I GLCK S + EA L+ +
Sbjct: 533 NLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAM 579
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 173/387 (44%), Gaps = 27/387 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +F + L K + + + G P++YT+ LI+ CK G F +
Sbjct: 270 PNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRL 329
Query: 75 LGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+++RS PN +T+T++I G C + ++ A L ++++ G PN TY TLI+G
Sbjct: 330 FLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHC 389
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ G+ ++A EL M +E +P+V TY +++ G C
Sbjct: 390 KAGN-----------------------FERAYELMNVMNEEGFSPNVCTYNAIVDGLCKK 426
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
EA +L G+ + VT+ +++ E CK ++ +A L + M++ G++P+ Y
Sbjct: 427 GRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSY 486
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
TL+ FC R+ ++ F G T +Y+ +I GYC+ + AL + M
Sbjct: 487 TTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSD 546
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
G D + Y L L + +++ A L+D M G+ T T CK I +
Sbjct: 547 HGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCK---IDD 603
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
L L+ +L +R N L+ L
Sbjct: 604 GCSAMVVLERLEKKLWVRTVNTLVRKL 630
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 156/353 (44%), Gaps = 48/353 (13%)
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS-- 150
++K R+ EA + ++ G P+ T N ++ + G A NLF+EM +
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197
Query: 151 ------------------GN---------------------------GEFGVEGFVDKAK 165
GN EF +GFV +A
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRAL 257
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
F + + + P+++ +T +I G C +A +L EM+ +G +PNV T ++D L
Sbjct: 258 WYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGL 317
Query: 226 CKNGKMDEASRL-LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
CK G ++A RL L L+ +PN Y ++ G+C ++NRA+ L M+ G
Sbjct: 318 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPN 377
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
+Y+ LI+G+CK E A L M +G P+V YN + L + +V+ A+K+
Sbjct: 378 TNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLK 437
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
R+G+ AD TY I CK + I +A+ LF + + DI +Y LI
Sbjct: 438 SGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLI 490
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 142/344 (41%), Gaps = 15/344 (4%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F ++ P V ++ + +++ + L R+ GL P+ TY LI+
Sbjct: 327 FRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLID 386
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK G + ++ + F+PN T+ +++ GLC + R+ EA + G +
Sbjct: 387 GHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDA 446
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVD-----------KAKELFL 169
+ TY LI+ + AL LF +M + + + K E+F
Sbjct: 447 DKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFF 506
Query: 170 QMKDE-NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+ + P TYTS+I G+C + A M D G + +T+ ++ LCK
Sbjct: 507 EEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQ 566
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
K+DEA L D MI+ G+ P TL +C +++ V +E + V +
Sbjct: 567 SKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYC---KIDDGCSAMVVLERLEKKLWVRTV 623
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
+ L+ C +++ A + ++L K + V +E
Sbjct: 624 NTLVRKLCSERKVGMAALFFHKLLDKDPNVNRVTIAAFMTACYE 667
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 135/288 (46%), Gaps = 12/288 (4%)
Query: 119 EPNVFTYN---TLINGLYRTGHTIVALNLFE-EMASGNGEFGVEGFVDKAKELFLQMKDE 174
+PN T++ T++ L ++VAL+ F +AS ++ A L + ++
Sbjct: 70 DPNSLTHDQAVTIVASLASDAGSMVALSFFNWAIASSKFRHFTRLYIACAASL---ISNK 126
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
N +++ F EA ++IEM +QG+ P+ T N ++ + + G ++ A
Sbjct: 127 NFEKAHEVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYA 186
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
L D M GV+PN Y ++ G+C G V + M G + S+++
Sbjct: 187 ENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVRE 246
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
+C+ + AL + G++P+++ + + L + V++AF++ +EM G +
Sbjct: 247 FCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPN 306
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE---LDIRAYNCLIDG 399
+T+ IDGLCK + +A LF L++++ E ++ Y +I G
Sbjct: 307 VYTHTALIDGLCKKGWTEKAFRLF--LKLVRSENHKPNVLTYTAMISG 352
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
V ++ F GRV A E+ + M + G + + + ++ + +E A +L+ EM
Sbjct: 134 VMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEM 193
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
++G++P+ V Y + V ++ V + + M G D T + C+ ++
Sbjct: 194 CARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFV 253
Query: 372 VEAVELFRTLRILKCELDIRA----YNCLIDGL 400
A+ FR CE+ +R + C+I+GL
Sbjct: 254 TRALWYFRRF----CEMGLRPNLINFTCMIEGL 282
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 187/392 (47%), Gaps = 13/392 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F L A+ D LSL + S L PD+ YN+ I+CF K G+V + +
Sbjct: 238 FTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMK 297
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+ + VT+TS+I LC R+ EA LF + P + YNT+I G G
Sbjct: 298 ANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFE 357
Query: 140 VALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
A +L E G +G VD+A + F +MK + I P++ TY +I
Sbjct: 358 DAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMI 416
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
C A A + M D G+ PNV+T N+++D LCK ++D+A + + + R
Sbjct: 417 DMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCR 476
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P+A Y +L++G GRV+ A +L+ M Y+ LI + K E +
Sbjct: 477 PDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKI 536
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
Y EML G PD+++ NT +F+ ++E+ LF E++ G D +Y I GL K
Sbjct: 537 YNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVK 596
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ EA ELF T++ C LD RAYN +IDG
Sbjct: 597 AGFAHEAYELFYTMKEQGCVLDTRAYNTVIDG 628
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 196/398 (49%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + NI+ L K + D S+F+ L+ PD TY LI + GRV + +
Sbjct: 442 PNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKL 501
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++L + PNAV +TSLI+ R + ++ ++ GC P++ NT ++ +++
Sbjct: 502 YEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFK 561
Query: 135 TGHTIVALNLFEEMAS-----GNGEFGV-------EGFVDKAKELFLQMKDENINPDVVT 182
G LF+E+ + + + GF +A ELF MK++ D
Sbjct: 562 AGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRA 621
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +VI GFC + N+A LL EM +G +P VVT+ ++D L K ++DEA L +
Sbjct: 622 YNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 681
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ N +Y++L+DGF GR++ A + + G T V++++ L++ K +EI
Sbjct: 682 SKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEIS 741
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL + M P+ + Y+ L L +I + +AF + EMQ+ G + +TY T I
Sbjct: 742 EALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMI 801
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GL K IVEA LF + D YN +I+GL
Sbjct: 802 SGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGL 839
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 190/400 (47%), Gaps = 25/400 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNIL---FGCLAK---NKHYDTVLSLFKRLNSTGLFPDLYT 54
+ +++ ML+ P V +++ F C K +K Y+ +L L G PDL
Sbjct: 499 YKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRL-------GCSPDLLL 551
Query: 55 YNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLR 114
N ++C K G + G + I F P+A ++T LI GL EA LF ++
Sbjct: 552 LNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMK 611
Query: 115 VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE-----FG--VEGF-----VD 162
GC + YNT+I+G ++G A L EEM + E +G ++G +D
Sbjct: 612 EQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLD 671
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
+A LF + K + I +VV Y+S+I GF +EA ++ E+M +G+ PNV T+N ++
Sbjct: 672 EAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLL 731
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
D L K ++ EA M + PN Y+ L+ G C + N+A + M+ G
Sbjct: 732 DALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFK 791
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
VF+Y+ +I+G K I A +L+ + KG D IYN + L ++ A++L
Sbjct: 792 PNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRL 851
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
F+E + G + T T +D L K I +A + LR
Sbjct: 852 FEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLR 891
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 157/375 (41%), Gaps = 43/375 (11%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFK---RLNSTGLFPDLYTYNILINCFCK 64
L++ P+P ++ G L + K + ++ F+ RL + Y +++
Sbjct: 91 LDLNPNP------ELVIGVLRRLKDVNNAVNYFRWAERLTDRAHCREAYNSLLMV----- 139
Query: 65 MGRVSHGFVVLGRILR----SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
M R + F L +IL + F P+ T ++ ++ EA +R P
Sbjct: 140 MAR-TRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRP 198
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
Y LI L + + L LF+ QM++ +V
Sbjct: 199 AFSAYTNLIGALSTSRDSDCMLTLFQ-----------------------QMQELGYAVNV 235
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+T++IR F + A LL EM ++P+VV +NV +D K GK+D A +
Sbjct: 236 HLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHE 295
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M G+ + Y +++ C R+N A ELF M+ ++Y+ +I GY +
Sbjct: 296 MKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGK 355
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
E A SL KG P VV YN + L QV+ A K F+EM++D + + TY
Sbjct: 356 FEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNI 414
Query: 361 FIDGLCKNSYIVEAV 375
ID LCK + A+
Sbjct: 415 MIDMLCKAGKLETAL 429
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 188/393 (47%), Gaps = 14/393 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F + D M R P V +++++ L + + ++ + + GL P+ Y L+
Sbjct: 401 FELLDEM-KKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMT 459
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
K GRV ++L R+ P+ + SLI G C R+ EA ++ P
Sbjct: 460 AHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRP 519
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGN--GEFGV----------EGFVDKAKELF 168
N TY I+G + G +A F EM S G+ EG V +A +F
Sbjct: 520 NAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVF 579
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+ + DV TY+ +I G +EA + E+ ++G+ PN T+N ++ CK
Sbjct: 580 RFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQ 639
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G +D+AS+LL+ M G+ P+ YN L+DG C G + RAK LF +E G T +Y
Sbjct: 640 GNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTY 699
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ +++GYCK+K A L EML +G+ PD IYN + + + E+A LF EM
Sbjct: 700 AAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLE 759
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
G A+ T ++ T I+G CK+ + EA L +
Sbjct: 760 KGFAS-TVSFNTLIEGYCKSGKLQEANHLLEEM 791
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 196/415 (47%), Gaps = 29/415 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S N L G L K + +F + + + PD+YTY +I+ CK+G V V
Sbjct: 187 PSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRV 246
Query: 75 L------GRILRSC-----------FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 117
L R+L P+ T+ LI G C E R EA + ++ G
Sbjct: 247 LLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVG 306
Query: 118 CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAK 165
+P TYN LI+G R G A + +EM + E + G ++KA
Sbjct: 307 LKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKAL 366
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
E+ +M ++ + PD TY+ +I G C + A LL EM + + P V+T++VI++ L
Sbjct: 367 EIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGL 426
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
C+ G + + +L M+ G++PNA VY TLM GRV ++ + M G V
Sbjct: 427 CRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDV 486
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
F Y+ LI G+CK K +E A + EML + ++P+ Y + ++E A + F+E
Sbjct: 487 FCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNE 546
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
M GV + Y I+G CK + EA +FR + + D++ Y+ LI GL
Sbjct: 547 MLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGL 601
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/421 (29%), Positives = 197/421 (46%), Gaps = 51/421 (12%)
Query: 29 KNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 88
K + D + L + + GL PDLYTY+ILIN FC R ++L ++ P +
Sbjct: 253 KARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPI 312
Query: 89 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM 148
T+ +LI G + I +A + ++ G E N+ +NTL+NG+ + G AL + +EM
Sbjct: 313 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 372
Query: 149 ASGNGE-------FGVEGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
E +EG + +A EL +MK + P V+TY+ +I G C +
Sbjct: 373 MEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNL 432
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+L EM+ G++PN V + +M K G+++E+ +L+ M + G+ P+ F YN+L
Sbjct: 433 QGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSL 492
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ GFC R+ A+ + M +Y I+GY K E+E A + EMLS G+
Sbjct: 493 IIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGV 552
Query: 317 KPDVVIYNTL-------------------------------FVVLFEIHQVER------A 339
P+V IY L + VL IH + R A
Sbjct: 553 LPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVL--IHGLSRNGKMHEA 610
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
F +F E+Q G+ + +TY + I G CK + +A +L + I DI YN LIDG
Sbjct: 611 FGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDG 670
Query: 400 L 400
L
Sbjct: 671 L 671
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 199/406 (49%), Gaps = 15/406 (3%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+++ P P+ ++N L + + + + + G+ +L +N L+N CK G
Sbjct: 302 MIDVGLKPEPI-TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAG 360
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
++ ++ ++ P++ T++ LI+G C + A L +++ P V TY+
Sbjct: 361 KMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYS 420
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKD 173
+INGL R G+ + EM NG EG V++++ + +M++
Sbjct: 421 VIINGLCRCGNLQGTNAILREMVM-NGLKPNAVVYTTLMTAHAKEGRVEESRMILERMRE 479
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
+ I PDV Y S+I GFC A EA+ L+EM+++ ++PN T+ +D K G+M+
Sbjct: 480 QGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEI 539
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A R + M+ GV PN +Y L++G C G V A +F + S V +YS+LI+
Sbjct: 540 ADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIH 599
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
G +N ++ A ++ E+ KG+ P+ YN+L + V++A +L +EM G+
Sbjct: 600 GLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINP 659
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
D TY IDGLCK I A LF + + Y ++DG
Sbjct: 660 DIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDG 705
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 187/396 (47%), Gaps = 26/396 (6%)
Query: 6 YMLNM--RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
Y++ M R P ++ +K + F + S G+ P++ Y LI C
Sbjct: 508 YLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHC 567
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K G V+ F V IL + T++ LI GL ++ EA +F++L+ G PN F
Sbjct: 568 KEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAF 627
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
TYN+LI+G + G+ VDKA +L +M + INPD+VTY
Sbjct: 628 TYNSLISGSCKQGN-----------------------VDKASQLLEEMCIKGINPDIVTY 664
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
+I G C A + AK L ++ +G+ PN VT+ ++D CK+ A +LL+ M+
Sbjct: 665 NILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLL 724
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
GV P+AF+YN +++ C + +A +LF M G TV S++ LI GYCK+ +++
Sbjct: 725 RGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQE 783
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A L EM+ K P+ V Y +L + + A +L+ EMQ V TY + +
Sbjct: 784 ANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLH 843
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G + E LF + E D Y +ID
Sbjct: 844 GYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDA 879
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 127/298 (42%), Gaps = 54/298 (18%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++NIL L K + +LF + GL P+ TY +++ +CK + F +
Sbjct: 659 PDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQL 718
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L P+A + ++ C E + +A LF ++ G V ++NTLI G +
Sbjct: 719 LEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCK 777
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+G A +L EEM G + +AK L+L+M++ N+ P T
Sbjct: 778 SGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKT 837
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK------------ 230
YTS++ G+ + +E L EM+ +G++P+ +T+ V++D C+ G
Sbjct: 838 YTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEIL 897
Query: 231 -----------------------------MDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
MDEA+ +L M++ G N L+DG
Sbjct: 898 VKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 955
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 94/239 (39%), Gaps = 52/239 (21%)
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
PN V F+++MD K G + EA + RP+ N+L+ +V ++
Sbjct: 152 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 211
Query: 273 FVSMESMGCTHTVFSYSILI---------------------------------------- 292
F M + V++Y+ +I
Sbjct: 212 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKG 271
Query: 293 ------------NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
NG+C K A + EM+ G+KP+ + YN L +E+AF
Sbjct: 272 LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAF 331
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
++ DEM G+ A+ + T ++G+CK + +A+E+ + + E D + Y+ LI+G
Sbjct: 332 RIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEG 390
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/379 (31%), Positives = 200/379 (52%), Gaps = 12/379 (3%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
D L + + S G P L TYN ++ CK GRVS +L ++ P+ V++ +L
Sbjct: 277 DEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTL 336
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG 153
I G I EA LF +LR G P+V TYNTLI+GL R G VA+ L +EM
Sbjct: 337 IYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGP 396
Query: 154 E-------FGVEGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
+ V GF + AKELF +M + + PD Y + I G D ++A
Sbjct: 397 DPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFG 456
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
+ EM+ +G P+++T+NV +D L K G + EAS L+ M+ G+ P+ Y +++
Sbjct: 457 MQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHL 516
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
+ G + +A+ +F+ M S G +V +Y++LI+ Y ++ A+ + EM KG+ P+V+
Sbjct: 517 MAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVI 576
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
YN L L ++ ++++A+K F EMQ G++ + +TY I+ C + EA+ L++ +
Sbjct: 577 TYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDM 636
Query: 382 RILKCELDIRAYNCLIDGL 400
+ + D ++ L+ L
Sbjct: 637 LDREIQPDSCTHSALLKHL 655
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 177/390 (45%), Gaps = 59/390 (15%)
Query: 28 AKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC-KMGRVSHGFVVLGRILRSCFTPN 86
AK + L +F ++ S G+ PDL N ++ + + V ++ P
Sbjct: 130 AKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPT 189
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
VT+ +++ C + ++ EA L +++ GC PN TYN L+NGL +G
Sbjct: 190 VVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGE--------- 240
Query: 147 EMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
+++AKEL +M + TY +IRG+C +EA L EM
Sbjct: 241 --------------LEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEM 286
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI---------------------- 244
+ +G P +VT+N IM LCK G++ +A +LLD+M+
Sbjct: 287 LSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNI 346
Query: 245 -------------GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
G+ P+ YNTL+DG C G ++ A L M G VF+++IL
Sbjct: 347 GEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTIL 406
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
+ G+CK + A L+ EML++G++PD Y T V ++ +AF + +EM G
Sbjct: 407 VRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGF 466
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
D TY FIDGL K + EA EL + +
Sbjct: 467 PPDLITYNVFIDGLHKLGNLKEASELVKKM 496
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 150/303 (49%), Gaps = 16/303 (5%)
Query: 114 RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV---------------E 158
R G + + TY +++ L R G A + E++ S E GV +
Sbjct: 73 RQTGFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWIYAKK 132
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFC-YANDWNEAKCLLIEMMDQGVQPNVVT 217
++K +F +M + + PD+ V+R + + A+ + M++ G++P VVT
Sbjct: 133 SMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVT 192
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
+N ++D CK GK+ EA +LL M ++G PN YN L++G +G + +AKEL M
Sbjct: 193 YNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEML 252
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
+G + ++Y LI GYC+ +++ A L EMLS+G P +V YNT+ L + +V
Sbjct: 253 RLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVS 312
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
A KL D M + D +Y T I G + I EA LF LR + YN LI
Sbjct: 313 DARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLI 372
Query: 398 DGL 400
DGL
Sbjct: 373 DGL 375
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 61/137 (44%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ +L A + F ++ G+ P++ TYN LIN CK+ ++ +
Sbjct: 538 PSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKF 597
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ +PN T+T LI C EA L+ + +P+ T++ L+ L +
Sbjct: 598 FTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNK 657
Query: 135 TGHTIVALNLFEEMASG 151
+ V +L +A+G
Sbjct: 658 DYKSHVVRHLENVIAAG 674
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 196/382 (51%), Gaps = 26/382 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S+N+L K+ + L + L+ T + P+ TY+ ++ C G++ VL R
Sbjct: 141 SYNVLINAYCKSGEIEEALRV---LDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQ 197
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
L+S P+ VT T LI C ES + +A LF ++R GC+P+V TYN LI G
Sbjct: 198 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKG------- 250
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
F EG +D+A ++ DV+++ ++R C W +
Sbjct: 251 ----------------FCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMD 294
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A LL M+ +G P+VVTFN++++ LC+ G + +A +L++M + G PN+ +N L+
Sbjct: 295 AMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQ 354
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
GFC ++RA E M S GC + +Y+IL+ CK+ +++ A+ + ++ SKG P
Sbjct: 355 GFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSP 414
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
++ YNT+ L ++ + E A +L +EM G+ D T + + GL + + EA++ F
Sbjct: 415 SLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFF 474
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
L+ + + YN ++ GL
Sbjct: 475 HYLKGFGIKPNAFIYNSIMMGL 496
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 165/367 (44%), Gaps = 23/367 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + +L K + LF + G PD+ TYN+LI FCK GR+ +
Sbjct: 204 PDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIF 263
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ + ++ +++ LC+ R M+A L + GC P+V T+N LIN L +
Sbjct: 264 LKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQ 323
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G ALN+ E M P+ ++ +I+GFC
Sbjct: 324 KGLLGKALNVLE-----------------------MMPKHGHTPNSRSFNPLIQGFCNRK 360
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ A L M+ +G P++VT+N+++ LCK+GK+D+A +L + G P+ YN
Sbjct: 361 GIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYN 420
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
T++DG G+ A EL M G + + + ++ G + ++ A+ + +
Sbjct: 421 TVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGF 480
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
GIKP+ IYN++ + L + Q A +M +G +Y T I G+ EA
Sbjct: 481 GIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEA 540
Query: 375 VELFRTL 381
+L L
Sbjct: 541 SKLSNEL 547
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 121/257 (47%), Gaps = 14/257 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FNIL L + L++ + + G P+ ++N LI FC +
Sbjct: 309 PSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEH 368
Query: 75 LG-RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
L + R C+ P+ VT+ L+ LC + ++ +A + ++L GC P++ +YNT+I+GL
Sbjct: 369 LEIMVSRGCY-PDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLL 427
Query: 134 RTGHTIVALNLFEEM------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
+ G +A+ L EEM S G EG V +A + F +K I P+
Sbjct: 428 KVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAF 487
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y S++ G C A + A L++M+ G +P ++ ++ + G +EAS+L + +
Sbjct: 488 IYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNEL 547
Query: 242 IQIGVRPNAFVYNTLMD 258
G+ + + D
Sbjct: 548 YSRGLVKKSLIVKVSQD 564
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 118/240 (49%), Gaps = 3/240 (1%)
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
G +++ M ++ PDVV T++IR FC A ++ + + G + ++
Sbjct: 83 GELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSY 142
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
NV+++ CK+G+++EA R+LD V PNA Y+ ++ C G++ +A ++
Sbjct: 143 NVLINAYCKSGEIEEALRVLD---HTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQ 199
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
C V + ++LI+ CK + A+ L+ EM KG KPDVV YN L + +++
Sbjct: 200 SKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDE 259
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A ++ G +D ++ + LC ++A++L T+ C + +N LI+
Sbjct: 260 AIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILIN 319
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 86/175 (49%), Gaps = 3/175 (1%)
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
L +NG+++E SR L+ M G P+ L+ FC GR A + +E G
Sbjct: 79 LIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVID 138
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
SY++LIN YCK+ EIE AL + + P+ Y+ + L + ++++A ++ D
Sbjct: 139 ANSYNVLINAYCKSGEIEEALRVLDHT---SVAPNAATYDAVLCSLCDRGKLKQAMQVLD 195
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ D T ID CK S + +A++LF +R C+ D+ YN LI G
Sbjct: 196 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKG 250
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 82/217 (37%), Gaps = 58/217 (26%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
L+ + P + S+N + L K + + L + + GL PDL
Sbjct: 406 QLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDL-------------- 451
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+T TS++ GL E ++ EA F L+ FG +PN F YN
Sbjct: 452 ---------------------ITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYN 490
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
+++ GL + T +A++ +M + NG P +YT++
Sbjct: 491 SIMMGLCKAQQTSLAIDFLVDMVA-NG----------------------CKPTEASYTTL 527
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
I+G Y EA L E+ +G+ + V D
Sbjct: 528 IKGITYEGLAEEASKLSNELYSRGLVKKSLIVKVSQD 564
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/364 (32%), Positives = 182/364 (50%), Gaps = 23/364 (6%)
Query: 37 LSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 96
L FK + G P++ TYN +I+ +CK+ R F L + PN +TF +I G
Sbjct: 3 LRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIING 62
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG 156
LC + R+ E + + ++ G P+ TYNTL+NG + G+ AL L EM NG
Sbjct: 63 LCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVR-NG--- 118
Query: 157 VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
++P+VVTYTS+I C A + N A +M +G+ PN
Sbjct: 119 -------------------LSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNER 159
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
T+ I++ + G +DEA R+L+ M + G P+ YN L++G C+ GR+ A L M
Sbjct: 160 TYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDM 219
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
G V SYS +I+G+ +N+E++ A + EM+ K + PD V Y++L L E ++
Sbjct: 220 VGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRL 279
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
A +F EM + D +TY T I+ CK + +A+ L + D YN L
Sbjct: 280 TEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVL 339
Query: 397 IDGL 400
I+GL
Sbjct: 340 INGL 343
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 199/413 (48%), Gaps = 29/413 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + K K D + + GL P+L T+N++IN C+ GR+ V
Sbjct: 16 PNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEV 75
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + R + P+ VT+ +L+ G C E +A L ++ G PNV TY +LIN + +
Sbjct: 76 LVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCK 135
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G+ A+ F++M NG F +G +D+A + +M P +V
Sbjct: 136 AGNLNRAMEFFDQMHVRGLCPNERTYTTIING-FAQQGLLDEAYRVLNEMTRSGFIPSIV 194
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY ++I G C EA LL +M+ +GV P+VV+++ I+ +N ++D A ++ M
Sbjct: 195 TYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEM 254
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
I V P+A Y++L+ G C R+ A ++F M ++ F+Y+ LIN YCK ++
Sbjct: 255 IGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDL 314
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
AL L+ EM+ KG PD V YN L L + + + A +L ++ D TY T
Sbjct: 315 NKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTL 374
Query: 362 ID---------------GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I+ G C + EA ++F ++ + + YN +I G
Sbjct: 375 IENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHG 427
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 185/421 (43%), Gaps = 64/421 (15%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ ++ P + +FN++ L ++ + ++ G PD TYN L+N +CK G
Sbjct: 44 MGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGN 103
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V+ ++R+ +PN VT+TSLI +C + A F ++ V G PN TY T
Sbjct: 104 FHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTT 163
Query: 128 LINGLYRTGHTIVALNLFEEMA-SG------------NGEFGVEGFVDKAKELFLQMKDE 174
+ING + G A + EM SG NG V G +++A L M +
Sbjct: 164 IINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHC-VLGRMEEAIGLLQDMVGK 222
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
+ PDVV+Y+++I GF + + A + +EM+ + V P+ VT++ ++ LC+ ++ EA
Sbjct: 223 GVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEA 282
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+ M+ I + P+ F Y TL++ +C G +N+A L M G +Y++LING
Sbjct: 283 CDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLING 342
Query: 295 Y----------------------------------CKNKEIEGALSL------------- 307
C N E + A++L
Sbjct: 343 LNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEA 402
Query: 308 ---YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
+ M++K KP+ IYN + I V +A+KL+ EM T T +
Sbjct: 403 DQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKA 462
Query: 365 L 365
L
Sbjct: 463 L 463
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 173/410 (42%), Gaps = 72/410 (17%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L + K + + + F +++ GL P+ TY +IN F + G + + V
Sbjct: 121 PNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRV 180
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + RS F P+ VT+ +LI G C R+ EA L + G P+V +Y+T+I+G R
Sbjct: 181 LNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFAR 240
Query: 135 TGHTIVALNLFEEMASGNG-------EFGVEGFVDKAK-----ELFLQMKDENINPDVVT 182
A + EM + ++G ++ + ++F +M + PD T
Sbjct: 241 NQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFT 300
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL----------------- 225
YT++I +C D N+A L EM+ +G P+ VT+NV+++ L
Sbjct: 301 YTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLF 360
Query: 226 ---------------------------------CKNGKMDEASRLLDLMIQIGVRPNAFV 252
C G MDEA ++ + MI +PN +
Sbjct: 361 YDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAI 420
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF-SYSILINGYCKNKEIEGALSLYGEM 311
YN ++ G C G V +A +L+ M H F +++ + K EG E+
Sbjct: 421 YNVIIHGHCRIGNVLKAYKLYKEM-----VHVDFVPHTVTVLALVKALFTEGMDGELNEV 475
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVE----RAFKLFDEMQRDGVAADTWT 357
+ ++ + L VL EI+Q E F L EM +DG+ T T
Sbjct: 476 IGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTGT 525
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 193/393 (49%), Gaps = 12/393 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+ NI+ K + V ++ + +FPD+ T+N++++ + G V ++ +
Sbjct: 161 TLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSM 220
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ P VT+ S++KGL R +A +F + G P+V ++N LI G R G
Sbjct: 221 VSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGEL 280
Query: 139 IVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
AL ++EM G F G +D A E +M++ + PD V YT V
Sbjct: 281 EEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMV 340
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I GFC A EA + EM+ G P+VVT+N +++ LCK ++ +A LL+ M + GV
Sbjct: 341 IGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGV 400
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+ + TL+ G+C G + +A + F ++ + +Y+ LI+G C+ ++ A
Sbjct: 401 PPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANE 460
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L+ +M S+ I P+ V Y+ L E QV+ AF DEM G+ + TY + I G C
Sbjct: 461 LWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYC 520
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
++ + + + +R K D+ YN LI G
Sbjct: 521 RSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHG 553
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 188/367 (51%), Gaps = 22/367 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V SFN+L G + + L +K + + PD+ +++ LI F + G + H
Sbjct: 262 PDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEY 321
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P+ V +T +I G C ++EA + ++ FGC P+V TYNTL+NGL +
Sbjct: 322 LREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCK 381
Query: 135 TGHTIVALNLFEEMASGNGEFGV----------------EGFVDKAKELFLQMKDENINP 178
A L EM E GV +G ++KA + F + D+ + P
Sbjct: 382 ERRLSDAEELLNEMK----ERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRP 437
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D+VTY ++I G C D +A L +M + + PN VT+++++D C+ G++D A L
Sbjct: 438 DIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFL 497
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
D M+ G+ PN YN+++ G+C +G V++ ++ M + +Y+ LI+GY K
Sbjct: 498 DEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKE 557
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH-QVERAFKLFDEMQRDGVAADTWT 357
++ A +L M ++ ++PD V YN + + F +H ++ A ++ +M G+ D +T
Sbjct: 558 GKMHEAFNLLKIMENENVQPDAVTYN-MIISGFSVHGNMQEADWVYKKMGARGIEPDRYT 616
Query: 358 YRTFIDG 364
Y + I+G
Sbjct: 617 YMSMING 623
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 189/385 (49%), Gaps = 23/385 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N + L +N +D +F+ +++ G+ PD+ ++N+LI FC+ G +
Sbjct: 227 PGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRF 286
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ TP+ V+F+ LI + AA ++R FG P+ Y +I G R
Sbjct: 287 YKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCR 346
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G + AL + +EM + FG PDVVTY +++ G C
Sbjct: 347 AGLMLEALRVRDEMVA----FGCL-------------------PDVVTYNTLLNGLCKER 383
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
++A+ LL EM ++GV P++ TF ++ C++G +++A + D + +RP+ YN
Sbjct: 384 RLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYN 443
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+DG C G + +A EL+ M S +YSILI+ +C+ +++ A + EM++K
Sbjct: 444 TLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNK 503
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
GI P+++ YN++ V + + +M+ D V D TY T I G K + EA
Sbjct: 504 GIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEA 563
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
L + + + D YN +I G
Sbjct: 564 FNLLKIMENENVQPDAVTYNMIISG 588
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 149/285 (52%), Gaps = 12/285 (4%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G PD+ TYN L+N CK R+S +L + P+ TFT+LI G C + I +A
Sbjct: 364 GCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKA 423
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS-----GNGEFGV---- 157
F + P++ TYNTLI+G+ R G A L+++M S + + +
Sbjct: 424 LQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDS 483
Query: 158 ---EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
+G VD A +M ++ I P+++TY S+I+G+C + + ++ + L +M V P+
Sbjct: 484 HCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPD 543
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
++T+N ++ K GKM EA LL +M V+P+A YN ++ GF + G + A ++
Sbjct: 544 LITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYK 603
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
M + G ++Y +ING+ + + L+ EML KG+ PD
Sbjct: 604 KMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 153/323 (47%), Gaps = 23/323 (7%)
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
+L S N T ++ C + E + +++ P+V T+N +++ +R G
Sbjct: 150 VLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGD 209
Query: 138 TIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
A+ L + M S + I P +VTY SV++G W+
Sbjct: 210 VEAAMALIDSMVS-----------------------KGIKPGLVTYNSVLKGLLRNGRWD 246
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
+A+ + M GV P+V +FN+++ C+ G+++EA R M V P+ ++ L+
Sbjct: 247 KAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLI 306
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
F G ++ A E M G Y+++I G+C+ + AL + EM++ G
Sbjct: 307 GLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCL 366
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
PDVV YNTL L + ++ A +L +EM+ GV D T+ T I G C++ I +A++
Sbjct: 367 PDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQF 426
Query: 378 FRTLRILKCELDIRAYNCLIDGL 400
F T+ + DI YN LIDG+
Sbjct: 427 FDTISDQRLRPDIVTYNTLIDGM 449
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 129/273 (47%), Gaps = 23/273 (8%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R PP +C+F L ++ + + L F ++ L PD+ TYN LI+ C+ G
Sbjct: 395 MKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGD 454
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ + + PN VT++ LI C + ++ A A ++ G PN+ TYN+
Sbjct: 455 LGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNS 514
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
+I G R+G+ V K ++ +M+ + + PD++TY ++I
Sbjct: 515 IIKGYCRSGN-----------------------VSKGQQFLPKMRHDKVMPDLITYNTLI 551
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
G+ +EA LL M ++ VQP+ VT+N+I+ +G M EA + M G+
Sbjct: 552 HGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIE 611
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
P+ + Y ++++G + G ++ +L M G
Sbjct: 612 PDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKG 644
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 72/148 (48%), Gaps = 1/148 (0%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F D M+N + P + ++N + ++ + ++ + PDL TYN LI+
Sbjct: 494 FAFLDEMVN-KGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIH 552
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+ K G++ F +L + P+AVT+ +I G + EA ++ K+ G EP
Sbjct: 553 GYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEP 612
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEM 148
+ +TY ++ING G++ + L +EM
Sbjct: 613 DRYTYMSMINGHVVAGNSKKSFQLHDEM 640
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 181/345 (52%), Gaps = 23/345 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ + L + + L + + + L D TY +LI+ +CK G+++ F + +
Sbjct: 398 TYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAM 457
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
++ TPN VT+T+L GLC + + A L ++ G E N TYN+LINGL + G
Sbjct: 458 VQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAG-- 515
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
++++A M + PDV TYT++I C + D +
Sbjct: 516 ---------------------YLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDR 554
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A LL EM+D+G++P +VT+NV+M+ C +G+++ +LLD M++ + PNA YN+LM
Sbjct: 555 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMK 614
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
+C+ + E++ M S +Y+ILI G+CK + ++ AL + EM+ KG +
Sbjct: 615 QYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRL 674
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
Y+ L +L + + A +LF +M+++G+ A++ Y +ID
Sbjct: 675 TATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYID 719
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 188/395 (47%), Gaps = 15/395 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
VCS+NIL L LF + S PD+ TY ILI+ C +G + + +L
Sbjct: 259 VCSYNILLKALCDAGRVKDARQLFDEMASA---PDVVTYGILIHGHCALGELENAVKLLD 315
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ PNA +TS++ LC + I +A + + + Y T+++G G
Sbjct: 316 EMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKG 375
Query: 137 HTIVALNLFEEMA-SGNGEFGV------EGF-----VDKAKELFLQMKDENINPDVVTYT 184
+ A F+EM G GV G +++A++L +M ++ D VTYT
Sbjct: 376 DLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYT 435
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+I G+C EA + M+ +GV PNVVT+ + D LCK G + A+ LL M
Sbjct: 436 VLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNK 495
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G+ NA YN+L++G C G + +A M++ V++Y+ LI+ CK+ +++ A
Sbjct: 496 GLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRA 555
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
SL EML KGIKP +V YN L +VE KL D M + + TY + +
Sbjct: 556 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQ 615
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
C + + E+++ +R + YN LI G
Sbjct: 616 YCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKG 650
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 188/411 (45%), Gaps = 21/411 (5%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLY-----TYNIL 58
FD++L PS P + +G + + VLS + LF +L +YNIL
Sbjct: 207 FDFLLLCLPSAPLLRRLR-QYGISPSPEACNAVLSRLPLDEAIELFQELPHKNVCSYNIL 265
Query: 59 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC 118
+ C GRV + + + P+ VT+ LI G CA + A L ++ G
Sbjct: 266 LKALCDAGRVKDARQLFDEMASA---PDVVTYGILIHGHCALGELENAVKLLDEMVAGGV 322
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG-------VEGFVDK-----AKE 166
EPN Y +++ L G AL + E+M + GF +K A+
Sbjct: 323 EPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARR 382
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
F +M+ + + D VTYT++I G C A + EA+ LL EM + + + VT+ V++D C
Sbjct: 383 WFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYC 442
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
K GKM EA ++ + M+Q GV PN Y L DG C G V A EL M + G
Sbjct: 443 KRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNAC 502
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+Y+ LING CK +E A+ +M + +KPDV Y TL L + ++RA L EM
Sbjct: 503 TYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEM 562
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
G+ TY ++G C + + +L + + YN L+
Sbjct: 563 LDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLM 613
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 156/326 (47%), Gaps = 22/326 (6%)
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
F+ + +F L+ LC + +A L +LR +G P+ N +++ L A+
Sbjct: 200 FSSDPASFDFLL--LC-----LPSAPLLRRLRQYGISPSPEACNAVLSRLPLDE----AI 248
Query: 143 NLFEEMASGN--------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
LF+E+ N G V A++LF +M PDVVTY +I G C
Sbjct: 249 ELFQELPHKNVCSYNILLKALCDAGRVKDARQLFDEMASA---PDVVTYGILIHGHCALG 305
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ A LL EM+ GV+PN + ++ LC G + +A R+++ M+Q V + +Y
Sbjct: 306 ELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYT 365
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
T++ GFC G + A+ F M+ G +Y+ +ING C+ E+E A L EM ++
Sbjct: 366 TVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWAR 425
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
+ D V Y L + ++ AF++ + M + GV + TY DGLCK + A
Sbjct: 426 RLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAA 485
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
EL + EL+ YN LI+GL
Sbjct: 486 NELLHEMSNKGLELNACTYNSLINGL 511
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 7/132 (5%)
Query: 3 IFDYML--NMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ D+ML N+ P+ ++N L + + ++K + S + P+ TYNILI
Sbjct: 593 LLDWMLEKNIHPN---AATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIK 649
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG--C 118
CK + +++ F A ++++LI+ L + + +EA LF +R G
Sbjct: 650 GHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTA 709
Query: 119 EPNVFTYNTLIN 130
E +V+ + +N
Sbjct: 710 ESDVYDFYIDLN 721
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 191/390 (48%), Gaps = 16/390 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FN++ + + D + +F+ + PD YTY+ L++ CK R+ +
Sbjct: 168 PNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSL 227
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + PN V F LI LC + + AA L + + GC PN TYN L++GL
Sbjct: 228 LDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCL 287
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G A++L +M S NG F ++G + + ++ +
Sbjct: 288 KGKLEKAVSLLNQMVSNKCVPNDVTFGTLING-FVMQGRASDGTRVLVSLEARGHRGNEY 346
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y+S+I G C +N+A L EM+ +G PN + ++ ++D LC+ GK+DEA L M
Sbjct: 347 VYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEM 406
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
G PN+F Y++LM G+ G ++A ++ M + C H YSILING CK+ +
Sbjct: 407 KNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKF 466
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG--VAADTWTYR 359
AL ++ +MLS+GIK DVV Y+++ + VE+ KLF++M G V D TY
Sbjct: 467 MEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYN 526
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELD 389
++ C I A+++ + C+ D
Sbjct: 527 ILLNAFCIQKSIFRAIDILNIMLDQGCDPD 556
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 190/387 (49%), Gaps = 28/387 (7%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRL---NSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
V SFN + + + ++ L + + S + P+ T+N++I C++G V
Sbjct: 132 VKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIE 191
Query: 74 VLGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
V I LR+C P+ T+++L+ GLC E RI EA +L +++V G PN+ +N LI+ L
Sbjct: 192 VFREIPLRNC-APDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISAL 250
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ G A L + M ++G V P+ VTY +++ G C
Sbjct: 251 CKKGDLGRAAKLVDNMF-------LKGCV----------------PNEVTYNALVHGLCL 287
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
+A LL +M+ PN VTF +++ G+ + +R+L + G R N +V
Sbjct: 288 KGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYV 347
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
Y++L+ G C G+ N+A EL+ M GC YS LI+G C+ +++ A EM
Sbjct: 348 YSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMK 407
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
+KG P+ Y++L FE +A ++ EM + + Y I+GLCK+ +
Sbjct: 408 NKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFM 467
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDG 399
EA+ +++ + +LD+ AY+ +I G
Sbjct: 468 EALMVWKQMLSRGIKLDVVAYSSMIHG 494
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 204/436 (46%), Gaps = 61/436 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +F+IL L K+ + L LF + G+ PD +TY ++I+ C+ RV + +
Sbjct: 194 PNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRL 253
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ S P+ VT +L+ G C R+ EA +L G +V Y+ LI GL+R
Sbjct: 254 FDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFR 313
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
L+ +M N + V G V A EL +M + + PD V
Sbjct: 314 AKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVC 373
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I+GFC +EA+ L +E+ PNV T+++++ +C+NG +A + + M
Sbjct: 374 YNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEME 433
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME-----------SMGCTHT------- 284
++G P+A +N+L+DG C TG++ +A LF ME S G +H
Sbjct: 434 KLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQ 493
Query: 285 ------------------------------VFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+++Y+IL+NG+CK GA L+ EM K
Sbjct: 494 KMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFK 553
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+ PD V Y TL L + E A+K+FD+M+++G D YRT + +C+ + A
Sbjct: 554 GLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRA 613
Query: 375 VELF-RTLRILKCELD 389
L+ + LR ++ + D
Sbjct: 614 FSLWLKYLRNIRSQED 629
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 191/406 (47%), Gaps = 25/406 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+F +L K D + F + PD+YTYN++++ + + V R+
Sbjct: 128 AFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRM 187
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
++ PN TF+ LI GLC + +A LF ++ G P+ FTY +I+GL R+
Sbjct: 188 MKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRV 247
Query: 139 IVALNLFEEMA-SGNGEFGV------EGF-----VDKAKELFLQMKDENINPDVVTYTSV 186
A LF++M SG G V GF VD+A L + + DV Y+ +
Sbjct: 248 DDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCL 307
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
IRG A + + + L +M++ V+P+V + ++M L + GK+ +A LL+ M + GV
Sbjct: 308 IRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGV 367
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+ YN L+ GFC G ++ A+ L + + C V +YSILI+G C+N A
Sbjct: 368 VPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQE 427
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM-------------QRDGVAA 353
++ EM G P V +N+L L + Q+E+A LF +M Q
Sbjct: 428 IFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVL 487
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
D+ + + ++ LC + I +A + L I YN L++G
Sbjct: 488 DSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNG 533
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 141/296 (47%), Gaps = 23/296 (7%)
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKA 164
+A F +R F C P+V+TYN +++ L + ++AL ++ M
Sbjct: 144 KAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMK-------------- 189
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
N P+V T++ +I G C + + +A L EM +G+ P+ T+ V++
Sbjct: 190 ---------LNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISG 240
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
LC++ ++D+A RL D M GV P+ N L++GFC+ RV+ A L E G
Sbjct: 241 LCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLD 300
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
V YS LI G + K E LY +M+ +KPDV +Y + L E +V A +L +
Sbjct: 301 VRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLN 360
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
EM GV DT Y I G C + EA L + C +++ Y+ LI G+
Sbjct: 361 EMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGM 416
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 156/344 (45%), Gaps = 23/344 (6%)
Query: 57 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF 116
+LI + KMG G + TP+ T+ ++ L ++ ++ A ++T++
Sbjct: 131 VLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKL 190
Query: 117 GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI 176
C PNV T++ LI+GL ++G+ AL+LF+EM I
Sbjct: 191 NCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQ-----------------------RGI 227
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
PD TY VI G C + ++A L +M D GV P+ VT N +++ C ++DEA
Sbjct: 228 LPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFS 287
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
LL L + G + Y+ L+ G R + L+ M V+ Y+I++ G
Sbjct: 288 LLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLA 347
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
+ ++ AL L EM G+ PD V YN L ++ + A L E+ R +
Sbjct: 348 EAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVK 407
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY I G+C+N +A E+F + L C +N LIDGL
Sbjct: 408 TYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGL 451
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 162/355 (45%), Gaps = 28/355 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + I+ LA+ L L + +G+ PD YN+LI FC MG +S +
Sbjct: 334 PDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSL 393
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
I R PN T++ LI G+C +A +F ++ GC P+ T+N+LI+GL +
Sbjct: 394 QLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCK 453
Query: 135 TGHTIVALNLFEEMASGNG-------------------------EFGVEGFVDKAKELFL 169
TG A LF +M G + G + KA + +
Sbjct: 454 TGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILM 513
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
Q+ D P + TY ++ GFC ++N A L EM +G+ P+ VT+ +++ L +
Sbjct: 514 QLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQ 573
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+ ++A ++ D M + G P+A VY T+M C + RA L+ ++ + + +
Sbjct: 574 REEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLW--LKYLRNIRSQEDEA 631
Query: 290 I-LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
I I GY + +E+E A+ EM K D+ Y + L + +V A K+F
Sbjct: 632 IKAIEGYFEKQEVEKAVRGLLEMDFKLNDFDLGPYAIWLIGLCQTRRVGEALKIF 686
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 1/204 (0%)
Query: 198 EAKCLLIEMM-DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
E C +E + + G++ + F V++ K G D+A M P+ + YN +
Sbjct: 108 ELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMI 167
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+D + A ++ M + C V ++SILI+G CK+ ++ AL L+ EM +GI
Sbjct: 168 LDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGI 227
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
PD Y + L +V+ A++LFD+M+ GV D T ++G C + EA
Sbjct: 228 LPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFS 287
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
L R LD+R Y+CLI GL
Sbjct: 288 LLRLFEKDGYVLDVRGYSCLIRGL 311
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 89/181 (49%)
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
++I D L ++ + L+ + G++ + + L+ + G ++A E F SM
Sbjct: 95 DLITDLLINQNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRD 154
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
CT V++Y+++++ + + AL++Y M+ P+V ++ L L + V+
Sbjct: 155 FDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKD 214
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A LFDEM + G+ D +TY I GLC++ + +A LF ++ D N L++
Sbjct: 215 ALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLN 274
Query: 399 G 399
G
Sbjct: 275 G 275
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 194/385 (50%), Gaps = 24/385 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FN L L ++ ++D +F L S + D Y++ I+I C+ G GF +
Sbjct: 122 PLSNTFNNLMCLLIRSNYFDKAWWIFNELKSKVVL-DAYSFGIMIKGCCEAGYFVKGFRL 180
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + +PN V +T+LI G C +M A LF K+ G PN TY+ L+NG ++
Sbjct: 181 LAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFK 240
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G EGF +++ MK I P+ Y +I +C
Sbjct: 241 QG------------------LQREGF-----QMYENMKRSGIVPNAYAYNCLISEYCNGG 277
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
++A + EM ++G+ V+T+N+++ LC+ K EA +L+ + ++G+ PN YN
Sbjct: 278 MVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYN 337
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L++GFC G+++ A LF ++S G + T+ +Y+ LI GY K + + GAL L EM +
Sbjct: 338 ILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEER 397
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
I P V Y L ++ E+A ++ M++ G+ D +TY I GLC + + EA
Sbjct: 398 CIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEA 457
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+LF++L + + + YN +I G
Sbjct: 458 SKLFKSLGEMHLQPNSVIYNTMIHG 482
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 167/343 (48%), Gaps = 20/343 (5%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
FC D L + P+P ++++L K +++ + +G+ P+ Y YN LI+
Sbjct: 216 FCKMD-RLGLVPNPH---TYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLIS 271
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+C G V F V + +T+ LI GLC + EA L K+ G P
Sbjct: 272 EYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSP 331
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGN-------------GEFGVEGFVDKAKEL 167
N+ TYN LING G A+ LF ++ S G VE A +L
Sbjct: 332 NIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAG-ALDL 390
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELC 226
+M++ I P VTYT +I F N + E C + +M++ G+ P+V T++V++ LC
Sbjct: 391 VKEMEERCIAPSKVTYTILIDAFARLN-YTEKACEMHSLMEKSGLVPDVYTYSVLIHGLC 449
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
+G M EAS+L + ++ ++PN+ +YNT++ G+C G RA L M G V
Sbjct: 450 VHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVA 509
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
S+ I C++++ + A L G+M++ G+KP V +Y + V
Sbjct: 510 SFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHKV 552
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 168/388 (43%), Gaps = 37/388 (9%)
Query: 26 CLAKNKHYDTVLSLFKRLNST-------------GLFPDLYTYNILINCFCKMGRVSHGF 72
CL YDT+++ + +ST G P T+N L+ + +
Sbjct: 85 CLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAW 144
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+ L+S +A +F +IKG C ++ L L FG PNV Y TLI+G
Sbjct: 145 WIFNE-LKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGC 203
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ G+ ++A K LF +M + P+ TY+ ++ GF
Sbjct: 204 CKYGNVMLA-----------------------KNLFCKMDRLGLVPNPHTYSVLMNGFFK 240
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
E + M G+ PN +N ++ E C G +D+A ++ M + G+
Sbjct: 241 QGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMT 300
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
YN L+ G C + A +L + +G + + +Y+ILING+C +++ A+ L+ ++
Sbjct: 301 YNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLK 360
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
S G+ P +V YNTL ++ + A L EM+ +A TY ID + +Y
Sbjct: 361 SSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTE 420
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
+A E+ + D+ Y+ LI GL
Sbjct: 421 KACEMHSLMEKSGLVPDVYTYSVLIHGL 448
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 120/374 (32%), Positives = 183/374 (48%), Gaps = 13/374 (3%)
Query: 37 LSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 96
LS F + S G+ PD+ N ++ R V +L+ P+ VT+ +L+
Sbjct: 187 LSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDS 246
Query: 97 LCAESRIMEAAALFTKL--RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM--ASGN 152
E R + A L ++ R GC PN T+N +I GL R G A + E M +
Sbjct: 247 FLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKA 306
Query: 153 GEFG---------VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
F +GFV KA +L L+M++E I P VVTY ++I G + A+
Sbjct: 307 SSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKF 366
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
+EM G+QP+V+T+N +++ CK G + EA L + G+ P YN L+DG+C
Sbjct: 367 VEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRL 426
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
G + A+ L M GC V +Y+IL+ G + A + EMLSKG++PD Y
Sbjct: 427 GDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAY 486
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
NT + + +AF+L + M +G+++DT TY IDGLCK + +A +L +
Sbjct: 487 NTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVH 546
Query: 384 LKCELDIRAYNCLI 397
+ D Y CLI
Sbjct: 547 NGLQPDCITYTCLI 560
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 177/385 (45%), Gaps = 23/385 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + L ++ + F + + GL PD+ TYN L+N +CK G + ++
Sbjct: 341 PTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLL 400
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
G + + P +T+ LI G C + EA L ++ GC P+V TY L+ G
Sbjct: 401 FGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKG--- 457
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
H +L + A+E F +M + + PD Y + IR
Sbjct: 458 -SHNACSLAM-------------------AREFFDEMLSKGLQPDCFAYNTRIRAELTLG 497
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+A L MM +G+ + VT+N+++D LCK G +++A L M+ G++P+ Y
Sbjct: 498 AIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYT 557
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ C G + A++ F M S G + +Y++ I+ YC+ + A + +ML +
Sbjct: 558 CLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEE 617
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G++P+ + YN L L + + A++ F EM G+ + +TY IDG CK +A
Sbjct: 618 GVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDA 677
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+ + + D + L G
Sbjct: 678 MRFYFEMHQNGIHPDYLTHKALFKG 702
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 190/435 (43%), Gaps = 50/435 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V N + L+ +D + ++ + G+ P + TYN L++ F K GR ++
Sbjct: 200 PDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAML 259
Query: 75 LGRILR--SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
L + S PN VT +I GL + + EAA + +R+ + + FTYN LI GL
Sbjct: 260 LKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRL-SKKASSFTYNPLITGL 318
Query: 133 YRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDV 180
G A +L EM + V G V+ A+ F++M+ + PDV
Sbjct: 319 LAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDV 378
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL--- 237
+TY S++ G+C A EA L ++ G+ P V+T+N+++D C+ G ++EA RL
Sbjct: 379 ITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEE 438
Query: 238 --------------------------------LDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
D M+ G++P+ F YNT + G
Sbjct: 439 MVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGA 498
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
+ +A L M G + +Y+ILI+G CK + A L +M+ G++PD + Y
Sbjct: 499 IAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTC 558
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L E + A K F +M DG+A TY FI C+ + A FR +
Sbjct: 559 LIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEG 618
Query: 386 CELDIRAYNCLIDGL 400
E + YN LI L
Sbjct: 619 VEPNEITYNVLIHAL 633
>gi|356561399|ref|XP_003548969.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12300, mitochondrial-like [Glycine max]
Length = 422
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 196/374 (52%), Gaps = 26/374 (6%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ML MR +PP + FN + G K K+Y +SL K++ G+ P+L T NILINCFC
Sbjct: 42 FNRMLLMRHTPP-IIKFNKILGSPVKMKYYPAAISLSKQMEVKGIEPNLVTLNILINCFC 100
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+G ++ F VLG+IL+ + PN +T T+LIKGLC + + ++ KL G + N
Sbjct: 101 HLGHMAFSFSVLGKILKLGYQPNTLTLTTLIKGLCLKDEVRKSLHFHDKLVAQGFQINHV 160
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
+ TL+NGL + G EM A +L ++D + +VV Y
Sbjct: 161 SCGTLLNGLCKIG----------EMRG-------------AMKLLRVIEDRSTITNVVMY 197
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
++I G C NEA L EM +G PNV+T++ ++ C G++ EA LL MI
Sbjct: 198 NTIIDGLCKDKLVNEAYDLYSEMDVRGNFPNVITYHTLICGFCLAGQLMEAFGLLKEMIL 257
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
+ P+ + YN LMD C G+ + A +L + V +Y+ L++G CKN ++
Sbjct: 258 KNIDPDVYTYNILMDALCKEGK-SYALDLIDEIHRRRQPADVVTYTSLLDGXCKNXYLDK 316
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A++L+ +M + I+P+V ++ L + + +++ A + F + G D WTY I
Sbjct: 317 AIALFKKMKERRIQPNVYTHSXLTGCV-KGGRLKNAQEFFQHLLVKGYCIDVWTYTVMIS 375
Query: 364 GLCKNSYIVEAVEL 377
GLCK + EA+ +
Sbjct: 376 GLCKEGMLDEALAM 389
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 151/320 (47%), Gaps = 24/320 (7%)
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
R+L TP + F ++ A +L ++ V G EPN+ T N LIN G
Sbjct: 44 RMLLMRHTPPIIKFNKILGSPVKMKYYPAAISLSKQMEVKGIEPNLVTLNILINCFCHLG 103
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
H + F V G + K P+ +T T++I+G C ++
Sbjct: 104 HMAFS-------------FSVLGKILKL----------GYQPNTLTLTTLIKGLCLKDEV 140
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
++ +++ QG Q N V+ +++ LCK G+M A +LL ++ N +YNT+
Sbjct: 141 RKSLHFHDKLVAQGFQINHVSCGTLLNGLCKIGEMRGAMKLLRVIEDRSTITNVVMYNTI 200
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG C VN A +L+ M+ G V +Y LI G+C ++ A L EM+ K I
Sbjct: 201 IDGLCKDKLVNEAYDLYSEMDVRGNFPNVITYHTLICGFCLAGQLMEAFGLLKEMILKNI 260
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
PDV YN L L + + A L DE+ R AD TY + +DG CKN Y+ +A+
Sbjct: 261 DPDVYTYNILMDALCKEGK-SYALDLIDEIHRRRQPADVVTYTSLLDGXCKNXYLDKAIA 319
Query: 377 LFRTLRILKCELDIRAYNCL 396
LF+ ++ + + ++ ++ L
Sbjct: 320 LFKKMKERRIQPNVYTHSXL 339
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 115/238 (48%), Gaps = 5/238 (2%)
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
A L QM+ + I P++VT +I FC+ + +L +++ G QPN +T ++
Sbjct: 73 AISLSKQMEVKGIEPNLVTLNILINCFCHLGHMAFSFSVLGKILKLGYQPNTLTLTTLIK 132
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
LC ++ ++ D ++ G + N TL++G C G + A +L +E
Sbjct: 133 GLCLKDEVRKSLHFHDKLVAQGFQINHVSCGTLLNGLCKIGEMRGAMKLLRVIEDRSTIT 192
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
V Y+ +I+G CK+K + A LY EM +G P+V+ Y+TL Q+ AF L
Sbjct: 193 NVVMYNTIIDGLCKDKLVNEAYDLYSEMDVRGNFPNVITYHTLICGFCLAGQLMEAFGLL 252
Query: 344 DEMQRDGVAADTWTYRTFIDGLCK--NSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
EM + D +TY +D LCK SY A++L + + D+ Y L+DG
Sbjct: 253 KEMILKNIDPDVYTYNILMDALCKEGKSY---ALDLIDEIHRRRQPADVVTYTSLLDG 307
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 116/245 (47%)
Query: 156 GVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNV 215
++ VD A F +M P ++ + ++ + A L +M +G++PN+
Sbjct: 30 SIDNVVDDAVSQFNRMLLMRHTPPIIKFNKILGSPVKMKYYPAAISLSKQMEVKGIEPNL 89
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
VT N++++ C G M + +L ++++G +PN TL+ G CL V ++
Sbjct: 90 VTLNILINCFCHLGHMAFSFSVLGKILKLGYQPNTLTLTTLIKGLCLKDEVRKSLHFHDK 149
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
+ + G S L+NG CK E+ GA+ L + + +VV+YNT+ L +
Sbjct: 150 LVAQGFQINHVSCGTLLNGLCKIGEMRGAMKLLRVIEDRSTITNVVMYNTIIDGLCKDKL 209
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
V A+ L+ EM G + TY T I G C ++EA L + + + + D+ YN
Sbjct: 210 VNEAYDLYSEMDVRGNFPNVITYHTLICGFCLAGQLMEAFGLLKEMILKNIDPDVYTYNI 269
Query: 396 LIDGL 400
L+D L
Sbjct: 270 LMDAL 274
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
++ R P V ++ L KN + D ++LFK++ + P++YT++ L C K GR
Sbjct: 289 IHRRRQPADVVTYTSLLDGXCKNXYLDKAIALFKKMKERRIQPNVYTHSXLTGCV-KGGR 347
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ + +L + + T+T +I GLC E + EA A+ K+ GC PN T+
Sbjct: 348 LKNAQEFFQHLLVKGYCIDVWTYTVMISGLCKEGMLDEALAMKXKMEDNGCIPNAVTFEI 407
Query: 128 LINGLYRTGHTIVAL 142
+I L+ AL
Sbjct: 408 IICSLFEKDENDKAL 422
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 118/361 (32%), Positives = 185/361 (51%), Gaps = 21/361 (5%)
Query: 38 SLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 97
SLF + + GL P++ Y LI+ +CK G + + F + + +PN TFT+LI GL
Sbjct: 446 SLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGL 505
Query: 98 CAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN----- 152
C +R+ EA LF ++ + PN TYN LI G + G+T+ A L +EM
Sbjct: 506 CHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDT 565
Query: 153 -------GEFGVEGFVDKAKELF--LQMKDENIN------PDVVTYTSVIRGFCYANDWN 197
G V +A+E LQ + + +N P+VVTYT++I G C +
Sbjct: 566 YTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMD 625
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
+A+ L EM+ PN T+ +D L G +++A +L D++++ G N YN L+
Sbjct: 626 KAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILI 684
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
GFC GR+ A E+ V+M G + SYS +I YC+ +++ A+ L+ ML++G+
Sbjct: 685 RGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVN 744
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
PD V YN L ++ +AF+L D+M R GV + TY + I G C S + +
Sbjct: 745 PDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADY 804
Query: 378 F 378
F
Sbjct: 805 F 805
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 130/445 (29%), Positives = 200/445 (44%), Gaps = 63/445 (14%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + + + L + + + L LF + S+GL PD+Y Y ++ C++ V
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+GR+ S + T+ I+GLC R+ EA + L G +V TY TL+ GL +
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCK 297
Query: 135 TGHTIVALNLFEEMASGNGEFGV----------------EGFVDKAKELFLQMKDENINP 178
+ EEM + EFG +G + A +L ++K + P
Sbjct: 298 ----VEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAP 353
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
+ Y ++I C +EA+ L M +G+ PN VT+++++D CK GK+D A L
Sbjct: 354 SLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFL 413
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
M ++G++ + Y++L+ G C G++ AK LF M + G V Y+ LI+GYCK
Sbjct: 414 GKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKE 473
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTL-------------------------------F 327
E+ A LY EM KGI P+ + L +
Sbjct: 474 GELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTY 533
Query: 328 VVLFEIHQVE----RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR- 382
VL E H E RAF+L DEM G+ DT+TYR I GLC + EA E L+
Sbjct: 534 NVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQG 593
Query: 383 -------ILKCELDIRAYNCLIDGL 400
I C ++ Y LI+GL
Sbjct: 594 EQQKLNEIEGCLPNVVTYTALINGL 618
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 197/428 (46%), Gaps = 67/428 (15%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +N L + K+ D SLF + GLFP+ TY+ILI+ FCK G++
Sbjct: 353 PSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHF 412
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
LG++ ++SLI G C ++ A +LF ++ G +PNV Y +LI+G +
Sbjct: 413 LGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCK 472
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G A L+ EM +G G I+P+ T+T++I G C+AN
Sbjct: 473 EGELHNAFRLYHEM-TGKG----------------------ISPNTYTFTALISGLCHAN 509
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EA L EM++ V PN VT+NV+++ CK G A LLD M++ G+ P+ + Y
Sbjct: 510 RMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYR 569
Query: 255 TLMDGFCLTGRVNRAKELFVSM--------ESMGCTHTVFSYSILINGYCK--------- 297
L+ G C TGRV+ A+E + E GC V +Y+ LING CK
Sbjct: 570 PLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAEL 629
Query: 298 --------------------------NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
IE A+ L+ ++L +G + V YN L
Sbjct: 630 LCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLH-DVLLEGFLANTVTYNILIRGFC 688
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIR 391
++ +++ A ++ M G++ D +Y T I C+ + EA++L+ ++ D
Sbjct: 689 KLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTV 748
Query: 392 AYNCLIDG 399
AYN LI G
Sbjct: 749 AYNFLIYG 756
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 197/393 (50%), Gaps = 14/393 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F++L +N+ L + + + G+ P + T + ++N ++ + + I+
Sbjct: 148 FDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIV 207
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
S P+ +T++++ LC + A + ++ GC+ +V TYN I GL +
Sbjct: 208 SSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVW 267
Query: 140 VALNL-----FEEMASGNGEF--------GVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
A+ + ++ + + G + VE F + +E+ +M + P +++
Sbjct: 268 EAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEF-EAGEEMMNEMIEFGFVPSEAAVSNL 326
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
+ G + A L+ ++ GV P++ +N +++ +CK+GK+DEA L + M G+
Sbjct: 327 VDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGL 386
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
PN Y+ L+D FC G+++ A M +G TV+ YS LI+G+CK ++ A S
Sbjct: 387 FPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKS 446
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L+ EM++ G+KP+VVIY +L + ++ AF+L+ EM G++ +T+T+ I GLC
Sbjct: 447 LFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLC 506
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + EA +LF + + YN LI+G
Sbjct: 507 HANRMAEANKLFGEMVEWNVIPNEVTYNVLIEG 539
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 177/404 (43%), Gaps = 20/404 (4%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++N+ L KN+ + + L+ GL D+ TY L+ CK+ G ++
Sbjct: 250 VATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMN 309
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ F P+ ++L+ GL + I A L K++ FG P++F YN LIN + + G
Sbjct: 310 EMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDG 369
Query: 137 HTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
A +LF M F G +D A +M + I V Y+
Sbjct: 370 KLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYS 429
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
S+I G C AK L EM+ G++PNVV + ++ CK G++ A RL M
Sbjct: 430 SLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGK 489
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G+ PN + + L+ G C R+ A +LF M +Y++LI G+CK A
Sbjct: 490 GISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRA 549
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR--------DGVAADTW 356
L EM+ KG+ PD Y L L +V A + +++Q +G +
Sbjct: 550 FELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVV 609
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY I+GLCK + +A L R + + Y C +D L
Sbjct: 610 TYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYL 653
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%)
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
MMD G+ P + T + +++ L + + A L D ++ G+RP+ +VY ++ C
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
RA+E+ MES GC +V +Y++ I G CKN+ + A+ + + KG++ DV Y T
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L + L ++ + E ++ +EM G +DGL K I A +L ++
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350
Query: 386 CELDIRAYNCLIDGL 400
+ YN LI+ +
Sbjct: 351 VAPSLFVYNALINSM 365
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 51/117 (43%)
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
T + +LI Y +N+ L + M+ GI P + + + L I Q A LF
Sbjct: 144 TTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLF 203
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
DE+ G+ D + Y + LC+ + A E+ + C+L + YN I GL
Sbjct: 204 DEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGL 260
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 5 DYMLNMRPS--PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ ++NM S P S++ + + + L++ + + G+ PD YN LI
Sbjct: 698 EVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGC 757
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 111
C G ++ F + ++R PN T+ SLI G C S + A F+
Sbjct: 758 CVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYFS 806
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 193/395 (48%), Gaps = 9/395 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +F ++ L D+ +L K + G P+ Y LI+ K+GRV+ +
Sbjct: 233 PTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKL 292
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L P+ TF I GLC RI EAA L ++ + G PN FTY L++GL R
Sbjct: 293 LEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCR 352
Query: 135 TGHTIVALNLFEEMASGN--------GEFGVEGFVDKAKELFLQ-MKDENINPDVVTYTS 185
G A L ++ + N + G +D+AK + + M PD+ TY +
Sbjct: 353 MGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNT 412
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I G C A+ L+ EM +G +PNV+T+ +++D CK G+++EA +LD M G
Sbjct: 413 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 472
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
+ NA YN L+ C +V A +F M S GC +F+++ LI G CK + E AL
Sbjct: 473 LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEAL 532
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
LY +ML +G+ + + YNTL ++ A KL ++M G D TY I L
Sbjct: 533 GLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKAL 592
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
C+ I + + LF + + + N LI+GL
Sbjct: 593 CRAGNIEKGLALFEDMMSKGLNPNNISCNILINGL 627
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 205/410 (50%), Gaps = 20/410 (4%)
Query: 7 MLNMR---PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
+L+MR P S+N++ L V ++F + S G+ P +YT+ +++ C
Sbjct: 187 LLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALC 246
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ V +L + R PNA+ + +LI L R+ E L ++ + GC P+V
Sbjct: 247 LVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVN 306
Query: 124 TYNTLINGLYRTGHTIVALNLFEEM-----ASGNGEFGV-------EGFVDKAKELFLQM 171
T+N I+GL + A L + M + +GV G VD+A+ L ++
Sbjct: 307 TFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV 366
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE-MMDQGVQPNVVTFNVIMDELCKNGK 230
NP+VV + ++I G+ +EAK ++ E M+ G P++ T+N ++ LCK G
Sbjct: 367 P----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGY 422
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ A L++ M G PN Y L+D FC GR+ A+ + M G Y+
Sbjct: 423 LVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNC 482
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI+ CK+++++ AL+++G+M SKG KPD+ +N+L L ++++ E A L+ +M +G
Sbjct: 483 LISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG 542
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
V A+T TY T I + + EA++L + C LD YN LI L
Sbjct: 543 VIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKAL 592
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 185/404 (45%), Gaps = 44/404 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS----- 69
P V +FN L K L R+ G P+ +TY +L++ C+MG+V
Sbjct: 303 PDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML 362
Query: 70 ----------------HGFVVLGRI-----------LRSCFTPNAVTFTSLIKGLCAESR 102
+G+V GR+ L P+ T+ +LI GLC +
Sbjct: 363 LNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGY 422
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF-- 160
++ A L ++++ GCEPNV TY LI+ + G A N+ +EM+ G+
Sbjct: 423 LVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNC 482
Query: 161 ----------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG 210
V A +F M + PD+ T+ S+I G C N + EA L +M+ +G
Sbjct: 483 LISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG 542
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
V N +T+N ++ + G M EA +L++ M+ G + YN L+ C G + +
Sbjct: 543 VIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGL 602
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
LF M S G S +ILING C+ I+ AL +M+ +G+ PD+V YN+L L
Sbjct: 603 ALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGL 662
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
+ + + A LFD++Q +G+ D TY T I CK +A
Sbjct: 663 CKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDA 706
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 154/324 (47%), Gaps = 12/324 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N L L K + + L + G P++ TY ILI+ FCK GR+ V
Sbjct: 405 PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 464
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + NAV + LI LC + ++ +A +F + GC+P++FT+N+LI GL +
Sbjct: 465 LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 524
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
AL L+++M F G + +A +L M D +T
Sbjct: 525 VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT 584
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I+ C A + + L +MM +G+ PN ++ N++++ LC+ G + A L MI
Sbjct: 585 YNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMI 644
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ P+ YN+L++G C TGR A LF ++ G +Y+ LI+ +CK +
Sbjct: 645 HRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFD 704
Query: 303 GALSLYGEMLSKGIKPDVVIYNTL 326
A L + G P+ V + L
Sbjct: 705 DAHLLLSRGVDSGFIPNEVTWYIL 728
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 150/341 (43%), Gaps = 45/341 (13%)
Query: 105 EAAALFTKLR-VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF--- 160
+A L +R V+ CEP +YN +++ L V N+F EM S V F
Sbjct: 182 QATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVV 241
Query: 161 ---------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
VD A L M P+ + Y ++I NE LL EM+ G
Sbjct: 242 MKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGC 301
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
P+V TFN + LCK ++ EA++L+D M+ G PN+F Y LM G C G+V+ A+
Sbjct: 302 IPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARM 361
Query: 272 LF--------------------------------VSMESMGCTHTVFSYSILINGYCKNK 299
L SM S+GC +F+Y+ LI G CK
Sbjct: 362 LLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKG 421
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
+ A L EM KG +P+V+ Y L + ++E A + DEM G+A + Y
Sbjct: 422 YLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYN 481
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I LCK+ + +A+ +F + C+ DI +N LI GL
Sbjct: 482 CLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGL 522
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 140/307 (45%), Gaps = 12/307 (3%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ ++ P V ++ IL K + ++ ++ GL + YN LI+ CK +
Sbjct: 433 MQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEK 492
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V + G + P+ TF SLI GLC ++ EA L+ + + G N TYNT
Sbjct: 493 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 552
Query: 128 LINGLYRTGHTIVALNLFEEM---------ASGNGEFGV---EGFVDKAKELFLQMKDEN 175
LI+ R G AL L +M + NG G ++K LF M +
Sbjct: 553 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 612
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+NP+ ++ +I G C + A L +M+ +G+ P++VT+N +++ LCK G+ EA
Sbjct: 613 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 672
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
L D + G+ P+A YNTL+ C G + A L G ++ IL++ +
Sbjct: 673 NLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNF 732
Query: 296 CKNKEIE 302
K + E
Sbjct: 733 IKEGDQE 739
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 117/278 (42%), Gaps = 33/278 (11%)
Query: 154 EFGVEGFVDKAKELFLQMKD-ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
+G G +A L L M+ + P +Y V+ N + EM+ +G+
Sbjct: 173 HYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGIS 232
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
P V TF V+M LC ++D A LL M + G PNA VY TL+ GRVN +L
Sbjct: 233 PTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKL 292
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
M MGC V +++ I+G CK I A L ML +G P+ Y L L
Sbjct: 293 LEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCR 352
Query: 333 IHQVERAFKLFDE--------------------------------MQRDGVAADTWTYRT 360
+ +V+ A L ++ M G D +TY T
Sbjct: 353 MGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNT 412
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
I GLCK Y+V A EL ++I CE ++ Y LID
Sbjct: 413 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILID 450
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 189/386 (48%), Gaps = 28/386 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V N + L +D + +++ + G+ P ++TYN L++ FCK GR+ +
Sbjct: 192 PFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVAL 251
Query: 75 LGRI---LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
L + C PN VT+ +I GL + + +AA L +R+ + + FTYN LI G
Sbjct: 252 LKDMEARAAGCL-PNDVTYNVVINGLARKGELEKAAQLVDIMRL-SKKASAFTYNPLITG 309
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
L FV+KA L L+M++E I P VVTY ++I G
Sbjct: 310 LL-----------------------ARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLF 346
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
+ A+ EM +G+ P+++T+N +++ CK G + +A L + + G+ P
Sbjct: 347 KTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVL 406
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
YN L+DG+C G + A+ L M C V +Y+IL+NG C + + + EM
Sbjct: 407 TYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEM 466
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
LSKG++PD YNT I + AF+L +EM G+++DT TY IDGLCK +
Sbjct: 467 LSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSL 526
Query: 372 VEAVELFRTLRILKCELDIRAYNCLI 397
+A L+ + LD Y CLI
Sbjct: 527 KDAYVLWMKMVTDGLRLDCVTYTCLI 552
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 176/385 (45%), Gaps = 23/385 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L K + + F + + GL PDL TYN LIN +CK G + +
Sbjct: 333 PTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCL 392
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
G + R+ P +T+ LI G C + A L ++ C P+V TY L+NG
Sbjct: 393 FGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCM 452
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ + F+EM S + + PD Y + I
Sbjct: 453 VRNLAMVRIFFDEMLS-----------------------KGLEPDCFAYNTRISAELTIG 489
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
A L EMM +G+ + VT+NV++D LCK G + +A L M+ G+R + Y
Sbjct: 490 AITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYT 549
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ C GR+ AK +F M + G + +V +Y+I I+ YC+ + A + +ML +
Sbjct: 550 CLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEE 609
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G++P+ V YN L L + + E A++ F EM G+ + +TY IDG CK V A
Sbjct: 610 GVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHA 669
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+ L+ + D +N L G
Sbjct: 670 IRLYCEMHQKGIHPDHCTHNALFKG 694
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 26/366 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNS--TGLFPDLYTYNILINCFCKMGRVSHGF 72
P + ++N L K D ++L K + + G P+ TYN++IN + G +
Sbjct: 227 PSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKA- 285
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
L I+R +A T+ LI GL A + +A AL ++ G P V TYNTLI+GL
Sbjct: 286 AQLVDIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGL 345
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
++TG+ A F+EM +AK L PD++TY S+I G+C
Sbjct: 346 FKTGNAEAAQVKFDEM--------------RAKGLL---------PDLITYNSLINGYCK 382
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
A + +A CL ++ G+ P V+T+N+++D C+ G ++ A RL + M + P+
Sbjct: 383 AGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCT 442
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
Y LM+G C+ + + F M S G F+Y+ I+ I A L EM+
Sbjct: 443 YTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMM 502
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
+GI D V YN L L + ++ A+ L+ +M DG+ D TY I C+ ++
Sbjct: 503 LRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLI 562
Query: 373 EAVELF 378
EA +F
Sbjct: 563 EAKNIF 568
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 201/410 (49%), Gaps = 12/410 (2%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ P V + + L L K +H+ + LF + + G+ PD+Y Y +I
Sbjct: 178 VFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSL 237
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C++ +S ++ ++ + N V + LI GLC + ++ EA + L +P+V
Sbjct: 238 CELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDV 297
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMAS---GNGEFGV---------EGFVDKAKELFLQ 170
TY TL+ GL + V L + +EM E V G V++A L +
Sbjct: 298 VTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKR 357
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ + ++P++ Y ++I C +++EA+ L M G+ PN VT+++++D C+ GK
Sbjct: 358 VAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGK 417
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+D A L MI +G++P+ + YN+L++G C G ++ A+ L M + TV +Y+
Sbjct: 418 LDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTS 477
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L+ GYC +I AL LY EM KGI P + + TL LF + A KLF EM
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWN 537
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
V + TY I+G C+ + +A E + D +Y LI GL
Sbjct: 538 VKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGL 587
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 209/443 (47%), Gaps = 48/443 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D ML +R SP +++ G L K + L+L KR+ G+ P+++ YN LI+
Sbjct: 319 MIDEMLRLRFSPSEAAVSSLVEG-LRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSL 377
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK ++ R+ + PN VT++ LI C ++ A + ++ G +P+V
Sbjct: 378 CKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSV 437
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
+ YN+LING + G A +L EM + G + +G ++KA L+ +
Sbjct: 438 YPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE 497
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + I P + T+T+++ G A +A L EM + V+PN VT+NV+++ C+ G
Sbjct: 498 MTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGN 557
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
M +A L+ MI+ G+ P+ + Y L+ G CLTG+ + AK + C Y+
Sbjct: 558 MSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617
Query: 291 LINGYCKNKEIEGALSL---------------YG--------------------EMLSKG 315
L++G+C+ ++E ALS+ YG EM +G
Sbjct: 618 LLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRG 677
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+KPD VIY ++ + + AF ++D M +G + TY I+GLCK ++ EA
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 376 ELFRTLRILKCELDIRAYNCLID 398
L +R + Y C +D
Sbjct: 738 ILCSKMRPGNSVPNQVTYGCFLD 760
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 184/383 (48%), Gaps = 23/383 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ +N+L L K + + + K L L PD+ TY L+ CK+ G ++
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMID 321
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+LR F+P+ +SL++GL ++ EA L ++ FG PN+F YN LI+ L +
Sbjct: 322 EMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGR 381
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+ D+A+ LF +M + P+ VTY+ +I FC
Sbjct: 382 N-----------------------FDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKL 418
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+ A L EM+D G++P+V +N +++ CK G + A L+ MI + P Y +L
Sbjct: 419 DTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSL 478
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
M G+C G++N+A L+ M G ++++++ L++G + I A+ L+ EM +
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNV 538
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
KP+ V YN + E + +AF+ +EM G+ DT++YR I GLC EA
Sbjct: 539 KPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598
Query: 377 LFRTLRILKCELDIRAYNCLIDG 399
L CEL+ Y L+ G
Sbjct: 599 FVDGLHKGNCELNEICYTGLLHG 621
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 190/415 (45%), Gaps = 31/415 (7%)
Query: 16 PVCSFNILFGCLAKNK------------HY-------DTVLSLFKRLNSTGLFPDLYTYN 56
P F+ LF C K K HY D VL + L P++ T +
Sbjct: 137 PSEVFDALFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLS 196
Query: 57 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF 116
L++ K + ++ P+ +T +I+ LC + A + ++
Sbjct: 197 ALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEAT 256
Query: 117 GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVD--------KAKELF 168
GC+ N+ YN LI+GL + A+ + +++A + V + + E+
Sbjct: 257 GCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVG 316
Query: 169 LQMKDE----NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
L+M DE +P +S++ G EA L+ + + GV PN+ +N ++D
Sbjct: 317 LEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDS 376
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
LCK DEA L D M +IG+ PN Y+ L+D FC G+++ A M MG +
Sbjct: 377 LCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPS 436
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
V+ Y+ LING+CK +I A SL EM++K ++P VV Y +L ++ +A +L+
Sbjct: 437 VYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH 496
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
EM G+ +T+ T + GL + I +AV+LF + + + YN +I+G
Sbjct: 497 EMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEG 551
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 177/395 (44%), Gaps = 47/395 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +F L L + + LF + + P+ TYN++I +C+ G +S F
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEF 564
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+ ++ LI GLC + EA L CE N Y L++G R
Sbjct: 565 LNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 135 TGHTIVALNLFEEMASGNGE-----FGV---EGFVDKAKELFL----QMKDENINPDVVT 182
G AL++ ++M + +GV K +++FL +M D + PD V
Sbjct: 625 EGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVI 684
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL----- 237
YTS+I D+ EA + M+++G PN VT+ +++ LCK G ++EA L
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMR 744
Query: 238 --------------LDLM----------------IQIGVRPNAFVYNTLMDGFCLTGRVN 267
LD++ I G+ N YN L+ GFC GR+
Sbjct: 745 PGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRME 804
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A EL M G + +Y+ +I+ C+ +++ A+ L+ M KGI+PD V YNTL
Sbjct: 805 EASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLI 864
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
++ +A +L +EM R G+ +T T T I
Sbjct: 865 HGCCVAGEMGKATELRNEMLRQGLKPNTETSETTI 899
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 185/406 (45%), Gaps = 15/406 (3%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+N + P V +++ G +K K + L L+ + G+ P +YT+ L++ + G
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGK-INKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAG 521
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ + + PN VT+ +I+G C E + +A ++ G P+ ++Y
Sbjct: 522 LIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYR 581
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDE 174
LI+GL TG A + + GN E F EG +++A + M
Sbjct: 582 PLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLR 641
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
++ D+V Y +I G D LL EM D+G++P+ V + ++D K G EA
Sbjct: 642 GVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEA 701
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+ DLMI G PN Y +++G C G VN A+ L M +Y ++
Sbjct: 702 FGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDI 761
Query: 295 YCKN-KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
K +++ A+ L+ +L KG+ + YN L ++E A +L M DGV+
Sbjct: 762 LTKGVGDMKKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSP 820
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
D TY T I LC+ + + +A+EL+ ++ D AYN LI G
Sbjct: 821 DCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHG 866
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSK-GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+ +LI Y +++ + + ++ M++K + P+V + L L + A +LFD+M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDM 218
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G+ D + Y I LC+ + A E+ + C+++I YN LIDGL
Sbjct: 219 INVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGL 272
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 47/112 (41%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N+L + + L R+ G+ PD TY +I+ C+ V + +
Sbjct: 789 TYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSM 848
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
P+ V + +LI G C + +A L ++ G +PN T T I+
Sbjct: 849 TEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTIS 900
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 126/398 (31%), Positives = 190/398 (47%), Gaps = 20/398 (5%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
SFN L L K + +++ ++ S+G+ P L T+N +IN CK G+V +V +I
Sbjct: 164 SFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKI 223
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ P+A T+TSLI G C ++ +A +F ++ GC PN TY+TLINGL G
Sbjct: 224 FQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRI 283
Query: 139 IVALNLFEEMASGNGEFGVE----------------GFVDKAKELFLQMKDENINPDVVT 182
A+++ EEM E G+E G VD A L M + +P V T
Sbjct: 284 GEAMDMLEEMT----EKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQT 339
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT++I G A A + +M+ +G+ PN VT+N +++ELC G+ A ++ D M
Sbjct: 340 YTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWME 399
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G NA YN ++ G + +A +F M G + TV +Y+ LI K +
Sbjct: 400 GHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLN 459
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A M +PD Y L + +++ A F EM + G++ + WTY I
Sbjct: 460 NATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMI 519
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
DG CK I A+ LF + C I YN +I GL
Sbjct: 520 DGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGL 557
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 181/384 (47%), Gaps = 12/384 (3%)
Query: 29 KNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 88
+N+ D +F R+ G P+ TY+ LIN C GR+ +L + P
Sbjct: 244 RNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVY 303
Query: 89 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM 148
T+T I LC R+ +A L + GC P+V TY +I+GL+R G +A+ ++ +M
Sbjct: 304 TYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKM 363
Query: 149 ASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
E EG A ++F M+ + TY +I+G +D
Sbjct: 364 LKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDI 423
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+A + +M+ G P VVT+N ++ E K G ++ A+R L +M + P+ Y L
Sbjct: 424 EKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCEL 483
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ GFC G+++ A F M G + ++Y+ +I+GYCK +I+ ALSL+ M G
Sbjct: 484 ISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGC 543
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+ YN + L + ++ A K +M G+ +T TY + I+GLCKN+ A +
Sbjct: 544 SASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFK 603
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
+F + C + Y LI GL
Sbjct: 604 IFHEMEKKNCLPNAHTYTSLIYGL 627
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 198/413 (47%), Gaps = 19/413 (4%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +FD M+ +P V +++ L L + + + + G+ P +YTY + I+
Sbjct: 252 FEVFDRMVKDGCNPNSV-TYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPIS 310
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C +GRV ++ + + +P+ T+T++I GL ++ A ++ K+ G P
Sbjct: 311 SLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVP 370
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKEL 167
N TYN LIN L G +AL +F+ M G FG++ ++KA +
Sbjct: 371 NTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDD-IEKAMVV 429
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
F +M + +P VVTY ++I N A L M + +P+ T+ ++ CK
Sbjct: 430 FNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCK 489
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
GK+D A+ M++ G+ PN + Y ++DG+C G+++ A LF ME GC+ ++ +
Sbjct: 490 GGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIET 549
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y+ +I+G K A +M +G++P+ + Y +L L + AFK+F EM+
Sbjct: 550 YNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEME 609
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + TY + I GLC+ + A L CE I Y+ L+ GL
Sbjct: 610 KKNCLPNAHTYTSLIYGLCQEGKVDAAERLTEN----GCEPTIDTYSTLVSGL 658
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 186/399 (46%), Gaps = 18/399 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L L + L +F + G + TYN +I M + VV
Sbjct: 370 PNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVV 429
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++L+ +P VT+ +LI + A ++ CEP+ TY LI+G +
Sbjct: 430 FNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCK 489
Query: 135 TGHTIVALNLFEEM-------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G A + F EM A +G + EG +D A LF +M++ + +
Sbjct: 490 GGKLDSATSFFYEMLKCGISPNQWTYTAMIDG-YCKEGKIDVALSLFERMEENGCSASIE 548
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY ++I G N ++EA+ +M +QG+QPN +T+ +++ LCKN + A ++ M
Sbjct: 549 TYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEM 608
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ PNA Y +L+ G C G+V+ A+ L GC T+ +YS L++G C+
Sbjct: 609 EKKNCLPNAHTYTSLIYGLCQEGKVDAAERL----TENGCEPTIDTYSTLVSGLCREGRS 664
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A L M KG+ P + IY +L V + +V+ A ++F+ M G + Y+
Sbjct: 665 NEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVL 724
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I LC S EA+ +F++L + D+ + L+DGL
Sbjct: 725 ICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGL 763
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 171/368 (46%), Gaps = 17/368 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ ML PSP V ++N L K + + + + PD TY LI+ F
Sbjct: 429 VFNKMLKDGPSPT-VVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGF 487
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G++ +L+ +PN T+T++I G C E +I A +LF ++ GC ++
Sbjct: 488 CKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASI 547
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFV------------DKAKELFLQ 170
TYN +I+GL + A +M + + + A ++F +
Sbjct: 548 ETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHE 607
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M+ +N P+ TYTS+I G C + A+ + + G +P + T++ ++ LC+ G+
Sbjct: 608 MEKKNCLPNAHTYTSLIYGLCQEGKVDAAE----RLTENGCEPTIDTYSTLVSGLCREGR 663
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+EAS+L++ M + G+ P+ +Y +L+ C + +V+ A E+F M G +F Y +
Sbjct: 664 SNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKV 723
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI C E AL+++ +L K D++++ L L + + K M+
Sbjct: 724 LICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRN 783
Query: 351 VAADTWTY 358
TY
Sbjct: 784 CTPSLHTY 791
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 144/335 (42%), Gaps = 51/335 (15%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F YM+ P ++ L K D+ S F + G+ P+ +TY +I+ +C
Sbjct: 464 FLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYC 523
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K G++ + R+ + + + T+ ++I GL +R EA K+ G +PN
Sbjct: 524 KEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTI 583
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGE----------FGV--EGFVDKAKELFLQM 171
TY +LINGL + T +A +F EM N +G+ EG VD A+ L
Sbjct: 584 TYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERL---- 639
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ P + TY++++ G C NEA L+ M ++G+ P++ + ++ CK+ K+
Sbjct: 640 TENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKV 699
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS---------------- 275
D A + +LM G +P+ F+Y L+ C R A +F S
Sbjct: 700 DCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVL 759
Query: 276 -------------------MESMGCTHTVFSYSIL 291
MES CT ++ +Y IL
Sbjct: 760 VDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIIL 794
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 67/117 (57%)
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
T++S++ L+ K + A ++Y ++ S G+KP ++ +NT+ +L + +V+ A +F
Sbjct: 161 TLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVF 220
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+++ + + D +TY + I G C+N + +A E+F + C + Y+ LI+GL
Sbjct: 221 NKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGL 277
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 63/153 (41%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +++ L L + + L + + GL P + Y L+ CK +V +
Sbjct: 646 PTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEI 705
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ F P+ + LI LC SR EA +F L ++ + L++GL +
Sbjct: 706 FNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQ 765
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKEL 167
G + + + M S N + ++ A+EL
Sbjct: 766 EGDSDLCMKFLYLMESRNCTPSLHTYIILAREL 798
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 188/388 (48%), Gaps = 14/388 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S+ IL L D +F +++ P ++TY +L++ CK+ RV +LG +
Sbjct: 163 SYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEM 222
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR---T 135
+ PN VT+ +LI GLC E R + L K+ + P+ +TY +++GL +
Sbjct: 223 VNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKV 282
Query: 136 GHTI----------VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
GH VAL + A NG + G + A ++ MK +NP V T+
Sbjct: 283 GHGAKVLHEAIGKGVALEVLTYNALING-YCKGGDMKAALDVLQLMKRNRVNPGVQTFNE 341
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
VI GFC ++A L +M G+ PN VTFN ++ C G+ A RLLDLM + G
Sbjct: 342 VIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYG 401
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
V P+ Y +D C G++ A LF + G Y+ L++GYC+ +I+ A
Sbjct: 402 VLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAF 461
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
L +M S+ PDV YNTL L ++ +++RA L D+M++ G+ T T+ I +
Sbjct: 462 GLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQM 521
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAY 393
+ +A +++ + C+ D + Y
Sbjct: 522 LWDKKHADAAKMYEQMISSGCKPDKQTY 549
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 183/403 (45%), Gaps = 17/403 (4%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG- 71
+PP C++N L K + R+ GL PD +TYN L+ C+ G ++
Sbjct: 86 APPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAAC 145
Query: 72 --FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
FV + R +C+ + ++T LIKGLCA RI +A +F K+ C P V TY L+
Sbjct: 146 GLFVQMPRRWGACY--DRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLL 203
Query: 130 NGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENIN 177
+GL + A L EM + G EG D +L +M+ + +
Sbjct: 204 DGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHS 263
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
PD TYT V+ G C +L E + +GV V+T+N +++ CK G M A +
Sbjct: 264 PDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDV 323
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
L LM + V P +N ++ GFC G+V++A M G + +++ LI+G C
Sbjct: 324 LQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCS 383
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
E + AL L M G+ PD Y L + Q+E A LF + G+ A
Sbjct: 384 VGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVI 443
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Y + + G C+ I A L + C D+ YN LIDGL
Sbjct: 444 YTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGL 486
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 178/401 (44%), Gaps = 52/401 (12%)
Query: 51 DLYTYNILINCFCKMG----RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
D+ ++N + + G R++H G +L+S PN T+ +LI C + + +A
Sbjct: 50 DVRSHNAALIAYSSRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADA 109
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE------------ 154
A ++R G P+ FTYN L+ GL R G A LF +M G
Sbjct: 110 RAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIK 169
Query: 155 -FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
G +D A +F +M P V TYT ++ G C EA+ LL EM+++GV P
Sbjct: 170 GLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVP 229
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
NVVT+N ++ LC+ G+ D+ ++LL+ M P+ + Y ++ G C G+V ++
Sbjct: 230 NVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVL 289
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALS--------------------LYG---- 309
G V +Y+ LINGYCK +++ AL ++G
Sbjct: 290 HEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCG 349
Query: 310 -----------EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+M G+ P+ V +N+L + + + A +L D M+ GV D TY
Sbjct: 350 GKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTY 409
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
FID LC + EA LF L + + Y L+ G
Sbjct: 410 AIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHG 450
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/457 (26%), Positives = 195/457 (42%), Gaps = 79/457 (17%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L G L + +D V L +++ PD +TY +++ CK G+V HG V
Sbjct: 229 PNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKV 288
Query: 75 LGRIL-----------------------------------RSCFTPNAVTFTSLIKGLCA 99
L + R+ P TF +I G C
Sbjct: 289 LHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCC 348
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV-- 157
++ +A A T++ G PN T+N+LI+G G +AL L + M E+GV
Sbjct: 349 GGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLME----EYGVLP 404
Query: 158 --------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
EG +++A LF + + I V YTS++ G+C D + A L+
Sbjct: 405 DRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLM 464
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
+M + P+V T+N ++D LCK ++D A LLD M + G+ P +N L+
Sbjct: 465 EKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWD 524
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILIN-----GYCKNKEIEGALSLYGEMLSKGIKP 318
+ A +++ M S GC +Y++ I+ G K + I+ A+ EM G+ P
Sbjct: 525 KKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVV---EMHEAGVFP 581
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK--------NSY 370
DV YN + + E+AF +M + D TY ++ +C N
Sbjct: 582 DVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEK 641
Query: 371 IVEAVELFRTLRIL---KCELD----IRAYNCLIDGL 400
I + V++ R L+ L CE D I Y L+ GL
Sbjct: 642 IWKMVDV-RNLQELFEQMCESDAAPGISTYKALLRGL 677
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 150/378 (39%), Gaps = 35/378 (9%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
D+ L +++ S PD++TYN LI+ CK+ R+ +L ++ + P TF L
Sbjct: 458 DSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNIL 517
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG 153
IK + + + +AA ++ ++ GC+P+ TY I+ + G T
Sbjct: 518 IKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGAT--------------- 562
Query: 154 EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
E +D A ++M + + PDV TY ++I+ + A +A ++M+ + P
Sbjct: 563 ---KEENIDMA---VVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDP 616
Query: 214 NVVTFNVIMDELCKNGKMD--------------EASRLLDLMIQIGVRPNAFVYNTLMDG 259
+ T++++++ +C D L + M + P Y L+ G
Sbjct: 617 DCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRG 676
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
C R+ + L + M+ L+ YC + A + M + +P
Sbjct: 677 LCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPG 736
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
+ L L + A +F +M G D ++ ID L + + +E+
Sbjct: 737 LKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLS 796
Query: 380 TLRILKCELDIRAYNCLI 397
+ KC R Y L+
Sbjct: 797 VMDAKKCVASTRTYASLV 814
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 157/419 (37%), Gaps = 38/419 (9%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FN L L L + G+ PD TY I I+ C G++ +
Sbjct: 369 PNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSL 428
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + V +TSL+ G C I A L K+ C P+V TYNTLI+GL +
Sbjct: 429 FSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCK 488
Query: 135 TGHTIVALNLFEEMASGNGE-----FGV---EGFVDK----AKELFLQMKDENINPDVVT 182
A++L ++M E F + + DK A +++ QM PD T
Sbjct: 489 VKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQT 548
Query: 183 YTSVIRGFCYANDWNEAKC-------LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
YT I + DW E ++EM + GV P+V T+N I+ G ++A
Sbjct: 549 YTLKI-----STDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAF 603
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTG--------------RVNRAKELFVSMESMGC 281
M+ + + P+ Y+ L++ C V +ELF M
Sbjct: 604 FAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDA 663
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
+ +Y L+ G C +E L +M I D + + L + A +
Sbjct: 664 APGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACE 723
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
F M + + GLC + AV +F + L D + LID L
Sbjct: 724 QFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCL 782
>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 195/399 (48%), Gaps = 15/399 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ +FD ML+ PSP V +++ + L+K + D +F R+ G+ PD Y L++
Sbjct: 227 YSLFDAMLDRGPSPD-VVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVH 285
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+C G+ + ++ R P+ VT+T+L+ LC + EA +F L G +P
Sbjct: 286 GYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKP 345
Query: 121 NVFTYNTLINGLYRTG-----HTIVALNLFEEMASGN-------GEFGVEGFVDKAKELF 168
+ TY TL++G G H ++ L + + M G+ G + VD+A +F
Sbjct: 346 DSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVF 405
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
M+ + +NPD+V Y +V+ C A ++A + +G+ PN+V F ++ LC
Sbjct: 406 SNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTC 465
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
K D+ L MI G+ + +N +M C GRV AK LF M +G +Y
Sbjct: 466 DKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTY 525
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ LI+GYC + +++ A+ L G M+ G+KP V YNT+ + ++E L EM
Sbjct: 526 NTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDG 585
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
GV TY + GL + V A EL+ LR++K +
Sbjct: 586 KGVNPGIVTYEMLLQGLFQAGRTVAAKELY--LRMIKWD 622
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 204/452 (45%), Gaps = 88/452 (19%)
Query: 36 VLSLFKRL---NSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTS 92
+SLF R+ +T P++ TY I+I C ++GR+ F +GR++ + + + F+
Sbjct: 80 AISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSP 139
Query: 93 LIKGLCAESRIMEAAAL-FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG 151
L+KGLC R +A + ++ GC+P++F+Y L+ GL + AL+L MA
Sbjct: 140 LLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADH 199
Query: 152 NGEFGV--------------EGFVDKAKELFLQMKDENINPDVVTYTSVI---------- 187
G + EG +DKA LF M D +PDVVTY+S+I
Sbjct: 200 KGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMD 259
Query: 188 -------------------------RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
G+C + EA + +M GV+P+VVT+ +M
Sbjct: 260 KATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALM 319
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
D LCKNGK EA ++ D +++ G +P++ Y TL+ G+ G + +L M G
Sbjct: 320 DYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQ 379
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
+++++ Y K+ +++ AL ++ M +G+ PD+V Y T+ +L +V+ A
Sbjct: 380 LGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQ 439
Query: 343 FDEMQRDGVAADTWTYRTFIDG-----------------------------------LCK 367
F+ ++ +G+A + + T I G LCK
Sbjct: 440 FNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCK 499
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
++EA LF + + E + YN LIDG
Sbjct: 500 KGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDG 531
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 183/415 (44%), Gaps = 82/415 (19%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P V ++ + L + D SLF + G PD+ TY+ +I+ K +
Sbjct: 204 PLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQ 263
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
V R++++ P+ + +TSL+ G C+ + EA +F K+ G EP+V TY L++ L
Sbjct: 264 VFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLC 323
Query: 134 RTGHTIVALNLFEEMASGN----------------------------------------- 152
+ G + A +F+ +
Sbjct: 324 KNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHH 383
Query: 153 ------GEFGVEGFVDKAKELFLQMKDENINPDVVTY----------------------- 183
G + VD+A +F M+ + +NPD+V Y
Sbjct: 384 IFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSL 443
Query: 184 ------------TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
T++I G C + W++ + L EM+D+G+ + + FN IM LCK G++
Sbjct: 444 KSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRV 503
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA L DLM++IG+ PN YNTL+DG+CL G+++ A +L M G + +Y+ +
Sbjct: 504 IEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTI 563
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
INGY +N IE L+L EM KG+ P +V Y L LF+ + A +L+ M
Sbjct: 564 INGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRM 618
>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 207/403 (51%), Gaps = 13/403 (3%)
Query: 10 MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS 69
M+ SP +IL G L + + +D+V ++ + S GL PD++ Y +L C K G S
Sbjct: 158 MKCSPDSKACLSILNG-LVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYS 216
Query: 70 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
+L + PN +T I LC ++++ EA +F ++ G PN++TY+ +I
Sbjct: 217 KKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMI 276
Query: 130 NGLYRTGHTIVALNLFEEMASGN-----GEFG--VEGFVDK-----AKELFLQMKDENIN 177
+G +TG+ A L++E+ FG V+GF A+ LF+ M ++
Sbjct: 277 DGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVD 336
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P++ Y +I G C + + EA LL EM + P+V T+ ++++ LC ++ EA+RL
Sbjct: 337 PNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRL 396
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
M + P++ YN+L+ G+C + +A +L M + G + ++S LI+GYC
Sbjct: 397 FQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCN 456
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
++I+ A+ LY EM KGI PDVV Y L F+ ++ A +L+ +M G+ + T
Sbjct: 457 VRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHT 516
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +DG K + A++ ++ + + + CLI+GL
Sbjct: 517 FACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGL 559
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 185/416 (44%), Gaps = 47/416 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + I L ++ + +F+ + G+ P+LYTY+ +I+ +CK G V + +
Sbjct: 232 PNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGL 291
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
IL + PN V F +L+ G C ++ A +LF + FG +PN++ YN LI+G +
Sbjct: 292 YKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCK 351
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENI------ 176
+G+ + A+ L EM S N +E V +A LF +MK+E I
Sbjct: 352 SGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSAT 411
Query: 177 -----------------------------NPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
P+++T++++I G+C D A L EM
Sbjct: 412 YNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMT 471
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+G+ P+VVT+ ++D K M EA RL M++ G+ PN + L+DGF GR++
Sbjct: 472 IKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLS 531
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A + + ++ LI G C+N I A + +M S GI PD+ Y ++
Sbjct: 532 VAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSML 591
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
+ ++ L +M + G+ + + N Y+ A L + R+
Sbjct: 592 KGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTNSSRL 647
>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Brachypodium distachyon]
Length = 597
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 195/440 (44%), Gaps = 53/440 (12%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP +FN L LA+ + LF + + P++ TY IL+ CK GRV
Sbjct: 134 PPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALS 193
Query: 74 VLGRI--LRSCFTPNAVTFTSLIKGLCAESRIMEAAALF-TKLR-VFGCEPNVFTY---- 125
VL + S P+ V +++ GLC R+ +A ++R V GC PN TY
Sbjct: 194 VLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLA 253
Query: 126 -------------------------------NTLINGLYRTGHTIVALNLFEEM------ 148
NT++ GL G AL F E
Sbjct: 254 HAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPE 313
Query: 149 ASGN--------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
A GN G F V A ELF +M DE +PD + Y ++I G A ++A
Sbjct: 314 ARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAW 373
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
+ M G Q + +N+++ C+ +++EA LL M + G++P+ + YNTL+ G
Sbjct: 374 SMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGL 433
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
C G EL M GC +V ++ LI+GYCK +I+ AL ++ M GI+P+
Sbjct: 434 CKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNT 493
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
VIYNTL L + A +LFDEM+ V A+ T+ + GL + +A EL
Sbjct: 494 VIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDL 553
Query: 381 LRILKCELDIRAYNCLIDGL 400
+R +C D + L++ L
Sbjct: 554 MREGRCTPDYVTIDILMEWL 573
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 169/379 (44%), Gaps = 53/379 (13%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNST-GLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
NI+ G + V + +R+ S G P+ TYN L + FC+ G V ++ ++
Sbjct: 214 NIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKME 273
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP--NVFTYNTLINGLYRTGH 137
+ TPNAVT +++ GLC R+ A F + R E N TY+TL+ T +
Sbjct: 274 KERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNN 333
Query: 138 TIVALNLFEEMA---------------SGNGEFG-------------------------- 156
VA+ LF EM SG + G
Sbjct: 334 VGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNI 393
Query: 157 -VEGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG 210
+ GF +++A EL +MK+ + PDV TY +++ G C A D+ LL +M+D G
Sbjct: 394 LIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGG 453
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
+P+VVTF ++ CK G++DEA R+ M + G++PN +YNTL+D C + + A
Sbjct: 454 CRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAI 513
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
ELF M V +++ L+ G E A L M PD V + L L
Sbjct: 514 ELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWL 573
Query: 331 FEIHQVERAFKLFDEMQRD 349
I + +R K F MQ D
Sbjct: 574 PVIGETDR-LKHF--MQHD 589
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 120/269 (44%), Gaps = 24/269 (8%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M++ SP + F ++ G L + D S+ + G D YNILI F
Sbjct: 340 LFHEMVDEGNSPDAIMYFTMISG-LTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGF 398
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ R++ + +LG + + P+ T+ +L+ GLC + L K+ GC P+V
Sbjct: 399 CRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSV 458
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
T+ TLI+G + G +D+A +F M + I P+ V
Sbjct: 459 VTFGTLIHGYCKVGQ-----------------------IDEALRIFRSMDESGIQPNTVI 495
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I C + D + A L EM ++ V NV TFN ++ L ++A L+DLM
Sbjct: 496 YNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMR 555
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
+ P+ + LM+ + G +R K
Sbjct: 556 EGRCTPDYVTIDILMEWLPVIGETDRLKH 584
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 75/177 (42%), Gaps = 4/177 (2%)
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
+ D A L D + P+ +NTL+D G + +LF SM V +
Sbjct: 115 SSSADAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVT 174
Query: 288 YSILINGYCKNKEIEGALSLYGEM--LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
Y IL+ G CK + ALS+ M + PDVV+ N + L + ++++A K +E
Sbjct: 175 YGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEE 234
Query: 346 MQRD--GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
R G A +T TY C+ + A EL + + + N ++ GL
Sbjct: 235 RMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGL 291
>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
Length = 583
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 111/332 (33%), Positives = 167/332 (50%), Gaps = 25/332 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ + R P V SFN++ + + L L +R+N G PD T+NIL++
Sbjct: 237 LFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGL 296
Query: 63 CKMGRVSHGFVVLGRILRSCF-TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
C+ VS G VL R+ R PN VTFTS+I G C ++ +A A++ + G PN
Sbjct: 297 CRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPN 356
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
TYN LING +G G + A E++ QM PDVV
Sbjct: 357 TVTYNVLING-----------------------YGKVGDLGSAVEVYQQMTRLRCPPDVV 393
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DL 240
T++S+I G+C ++A + +M +QPNV TF++I+ LCK + DEA LL +L
Sbjct: 394 TFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNEL 453
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
++ + P AF+YN ++D C G+V+ A + ME GC ++Y+ILI GYC
Sbjct: 454 NLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSR 513
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
I A+ + EM+ G PD + N L +
Sbjct: 514 ISEAIMFFHEMVEAGCSPDSITVNCFISCLLK 545
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 177/370 (47%), Gaps = 26/370 (7%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRS-CFTPNAVTFTS 92
D +L + + G + Y YN L++ GRV + R ++ ++P+ +F
Sbjct: 197 DASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNV 256
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN 152
+IKG+C ++ +A L ++ FGC P+ T+N L++GL RT
Sbjct: 257 VIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNE--------------- 301
Query: 153 GEFGVEGFVDKAKELFLQMKDENI-NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
V + E+ +++ + + P+VVT+TSVI G+C A +A + +M+ G+
Sbjct: 302 --------VSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGI 353
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
PN VT+NV+++ K G + A + M ++ P+ +++L+DG+C G+++ A
Sbjct: 354 MPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALR 413
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM-LSKGIKPDVVIYNTLFVVL 330
++ M V+++SI+I+ CK + A+ L E+ L I P IYN + VL
Sbjct: 414 IWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVL 473
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
+ +V+ A + M+ G D +TY I G C S I EA+ F + C D
Sbjct: 474 CKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDS 533
Query: 391 RAYNCLIDGL 400
NC I L
Sbjct: 534 ITVNCFISCL 543
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 185/384 (48%), Gaps = 20/384 (5%)
Query: 35 TVLSLFKRLNSTGL--FPDLYTYNILINCFCKMGRVSHGFVVLGRILRS-CFTPNAVTFT 91
+ L++F L+ + L P ++ +I C+ GR + + ++ ++P+A F
Sbjct: 125 SALAVFTALHCSPLSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDA-RFL 183
Query: 92 SLIKGLCAESRIMEAAA-LFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS 150
S + C + +++A+A L +K FGC + YN L++ L G + LFE
Sbjct: 184 SFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQ 243
Query: 151 GN------GEFGVE-------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
F V G V KA EL +M + +PD VT+ ++ G C N+ +
Sbjct: 244 DRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVS 303
Query: 198 EAKCLLIEMMDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+L + GV PNVVTF ++ CK GK+++A + + M+ G+ PN YN L
Sbjct: 304 RGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVL 363
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
++G+ G + A E++ M + C V ++S LI+GYC+ +++ AL ++ +M I
Sbjct: 364 INGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRI 423
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ-RDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+P+V ++ + L + ++ + A L +E+ R +A + Y ID LCK + EA
Sbjct: 424 QPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEAN 483
Query: 376 ELFRTLRILKCELDIRAYNCLIDG 399
+ + + C D Y LI G
Sbjct: 484 LIRKGMEEKGCRPDKYTYTILIIG 507
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 150/313 (47%), Gaps = 17/313 (5%)
Query: 105 EAAALFTKLRV--FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG--------E 154
A A+FT L P+ + +I L R+G AL LF++M + G
Sbjct: 125 SALAVFTALHCSPLSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLS 184
Query: 155 FGVEG-----FVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE-MMD 208
F V +D + L + + + Y ++ ++ L + D
Sbjct: 185 FLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQD 244
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
+ P+V +FNV++ +C+ G++ +A L++ M + G P+ +N L+DG C T V+R
Sbjct: 245 RVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSR 304
Query: 269 AKELFVSMESMG-CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
E+ ++ G C V +++ +I+GYCK ++E A+++Y +M++ GI P+ V YN L
Sbjct: 305 GHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLI 364
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
++ + A +++ +M R D T+ + IDG C+ + +A+ ++ + + +
Sbjct: 365 NGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQ 424
Query: 388 LDIRAYNCLIDGL 400
++ ++ +I L
Sbjct: 425 PNVYTFSIIIHSL 437
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 118/240 (49%), Gaps = 15/240 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +F + K + ++++ + ++G+ P+ TYN+LIN + K+G + V
Sbjct: 320 PNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEV 379
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ R P+ VTF+SLI G C ++ +A +++ + +PNV+T++ +I+ L +
Sbjct: 380 YQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCK 439
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF--------------VDKAKELFLQMKDENINPDV 180
+ A+ L E+ + + + F VD+A + M+++ PD
Sbjct: 440 QNRSDEAIGLLNEL-NLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDK 498
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
TYT +I G+C + +EA EM++ G P+ +T N + L K G +E ++ L
Sbjct: 499 YTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVMRL 558
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 202/411 (49%), Gaps = 27/411 (6%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP V +N + L K + L + K++ + G PD T++ LI+ C+ GRV
Sbjct: 361 PPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAER 420
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L R PN ++TSLI G C ++ A+ L ++ G P+V T+ LI+GL
Sbjct: 421 LLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLV 480
Query: 134 RTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
G AL + E+MA+ + + A+ L +M ++N++PD
Sbjct: 481 VAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKY 540
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
YT++I GF +EA+ + M +G+ P+VV +N ++ C+ G M+EA + M
Sbjct: 541 VYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTM 600
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++G P+ F Y TL+ G+ G ++ A L M C V +YS LINGYCK +
Sbjct: 601 RKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDT 660
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A L+G M S+G+ P+V+ Y L LF+ +V RA F+ M + + + +T +
Sbjct: 661 DAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSL 720
Query: 362 IDGLCKN-SYIVEA--------------VELFRTLRILKCELDIRAYNCLI 397
+ GLC + + I+ + +++FR L +C+ AYN +I
Sbjct: 721 VTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAII 771
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 187/375 (49%), Gaps = 12/375 (3%)
Query: 37 LSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 96
L L + G P+ YN+LI+ +C+ G V G ++LG + P VT+ +L+
Sbjct: 279 LKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSW 338
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG 156
L + + + A+L +++R PNV YN++I+ L + AL + ++M +G +
Sbjct: 339 LGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPD 398
Query: 157 V------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
EG V +A+ L + +NP++ +YTS+I GFC + A LL+
Sbjct: 399 AITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLV 458
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
EMM++G P+VVTF ++ L G++ EA + + M + P+A +YN L+ G C
Sbjct: 459 EMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKK 518
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
+ A+ L M + Y+ LI+G+ +N+ ++ A ++ M KGI PDVV YN
Sbjct: 519 MLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYN 578
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
+ + + A + M++ G D +TY T I G K I A+ L +
Sbjct: 579 AMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKR 638
Query: 385 KCELDIRAYNCLIDG 399
+C+ ++ AY+ LI+G
Sbjct: 639 RCQPNVVAYSSLING 653
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 164/367 (44%), Gaps = 23/367 (6%)
Query: 33 YDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTS 92
+D L+ + + D Y+ +++ C G V G ++ + PNAV +
Sbjct: 240 WDDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNV 299
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN 152
LI G C + L ++ G P V TY TL++ L
Sbjct: 300 LIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWL-------------------- 339
Query: 153 GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
G +G ++K L +M++ + P+V Y SVI C ++A +L +M G
Sbjct: 340 ---GRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCD 396
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
P+ +TF+ ++ LC+ G++ EA RLL + + PN Y +L+ GFC+ G V A L
Sbjct: 397 PDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNL 456
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
V M G T V ++ LI+G ++ AL + +M ++ + PD IYN L L +
Sbjct: 457 LVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCK 516
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
+ A L +EM V D + Y T IDG +N + EA ++F + D+
Sbjct: 517 KKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVG 576
Query: 393 YNCLIDG 399
YN +I G
Sbjct: 577 YNAMIKG 583
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 167/394 (42%), Gaps = 36/394 (9%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V +F L L L + +++ + L PD YN+LI+ CK +
Sbjct: 463 RGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPA 522
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
++ +L P+ +T+LI G + EA +F + G P+V YN +I
Sbjct: 523 ARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIK 582
Query: 131 GLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINP 178
G + G A+ M G + +G + A L M P
Sbjct: 583 GYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQP 642
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
+VV Y+S+I G+C D + A+CL M QG+ PNV+T+ +++ L K K+ A+
Sbjct: 643 NVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYF 702
Query: 239 DLMIQIGVRPNAFVYNTLMDGFC--LTGRVNRAKELFVSMESMGCTHTVF---------- 286
+ M+ PN + ++L+ G C + ++ V++ G +F
Sbjct: 703 EYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDP 762
Query: 287 ---SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK-- 341
+Y+ +I C + + AL L +M +KG KPD + +L + + R ++
Sbjct: 763 RNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGK-SREWRTI 821
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
L +E QRD + + Y+ D Y+V++V
Sbjct: 822 LPNEFQRDELEVAS-RYKILFD-----QYVVKSV 849
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 99/214 (46%), Gaps = 7/214 (3%)
Query: 192 YANDWNEAKCLLIEMMDQ-----GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
YA+ EAK EM + G P N ++ L + + D+A +L D M+
Sbjct: 198 YADAGMEAKA--AEMCQRAREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEES 255
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+ + ++ G CL G V + +L + GC Y++LI+GYC+ ++ +
Sbjct: 256 GADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGIL 315
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L GEM +KG+ P VV Y TL L +E+ L EM+ + + Y + ID LC
Sbjct: 316 LLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALC 375
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
K +A+ + + + C+ D ++ LI GL
Sbjct: 376 KCRSASQALVVLKQMFAGGCDPDAITFSTLISGL 409
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 186/384 (48%), Gaps = 29/384 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD ML+ R P V +++IL K Y + L + S G PD+ TYN+LIN
Sbjct: 182 VFDDMLH-RGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAM 240
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C G V VL + P+AVT+T ++K LC+ R EA L TK+ C P+
Sbjct: 241 CSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDE 300
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
T+N +I L + +GFV +A ++ QM + PD++T
Sbjct: 301 VTFNAVITSLCQ-----------------------KGFVGRATKVLAQMSEHGCTPDIIT 337
Query: 183 YTSVIRGFCYANDWNEA----KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
Y+S++ G C +EA K LL EM+ + P+ VTFN I+ LC+ G D A +++
Sbjct: 338 YSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVV 397
Query: 239 DLMIQIGVRPNAFVYNTLMDGF-CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
D M + G P+ YN ++DGF C + + A +L M S G +Y L G +
Sbjct: 398 DEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSR 457
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
E+E A+ ++ + + G+ PD ++YN + + L + + + A F M +G D T
Sbjct: 458 EDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDEST 517
Query: 358 YRTFIDGLCKNSYIVEAVELFRTL 381
Y ++G+ ++ EA EL L
Sbjct: 518 YIILVEGIAYEGFLEEAKELLGNL 541
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 173/365 (47%), Gaps = 28/365 (7%)
Query: 41 KRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 100
+ ++S PD +TYN LI C G V V +L +P+ VT++ L+ C E
Sbjct: 149 RMIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKE 208
Query: 101 SRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF 160
S +A L ++R GCEP++ TYN LIN + G AL + + S +G +
Sbjct: 209 SGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPS----YGCK-- 262
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
PD VTYT V++ C + W EA LL +M P+ VTFN
Sbjct: 263 -----------------PDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNA 305
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA----KELFVSM 276
++ LC+ G + A+++L M + G P+ Y+++MDG C RV+ A KEL M
Sbjct: 306 VITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEM 365
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF-VVLFEIHQ 335
S C +++ +I C+ + A+ + EM G PD+ YN + L + +
Sbjct: 366 VSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCK 425
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
E A L + M +G+ DT TY++ GL + + A+ +FR ++ + D YN
Sbjct: 426 TEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNA 485
Query: 396 LIDGL 400
++ GL
Sbjct: 486 ILLGL 490
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 177/412 (42%), Gaps = 76/412 (18%)
Query: 12 PSPPPVCS---FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV 68
P PP S N L + D L L ++ +G P + NILI C GRV
Sbjct: 53 PPKPPARSGGGANRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRV 112
Query: 69 SHGFVVLGRILRSCFTPNA--VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ V+ P+A +T+ +++ G C I A + + P+ FTYN
Sbjct: 113 ADAERVV-----EALGPSATIITYNTMVNGYCRAGNIDAARRMIDSVPF---APDTFTYN 164
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
LI L G + AL +F++M +P VVTY+ +
Sbjct: 165 PLIRALCVRGCVLDALAVFDDMLH-----------------------RGCSPSVVTYSIL 201
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
+ C + + +A LL EM +G +P++VT+NV+++ +C G + EA ++L+ + G
Sbjct: 202 LDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGC 261
Query: 247 RPNAFVY-----------------------------------NTLMDGFCLTGRVNRAKE 271
+P+A Y N ++ C G V RA +
Sbjct: 262 KPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATK 321
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL----SLYGEMLSKGIKPDVVIYNTLF 327
+ M GCT + +YS +++G CK + ++ A+ L EM+SK PD V +NT+
Sbjct: 322 VLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTII 381
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG-LCKNSYIVEAVELF 378
L + +RA K+ DEM G D TY +DG LCK+ EA++L
Sbjct: 382 TSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLL 433
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 131/291 (45%), Gaps = 26/291 (8%)
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGNGE-------------FGVEGFVDKAKELFLQMK 172
N + GL + G AL L + SG+G+ +G V A+ +
Sbjct: 65 NRRLRGLVQRGELDGALRLVHSI-SGSGKDPAVIPCNILIKKLCADGRVADAERVV---- 119
Query: 173 DENINPD--VVTYTSVIRGFCYANDWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNG 229
E + P ++TY +++ G+C A + + A+ M+D P+ T+N ++ LC G
Sbjct: 120 -EALGPSATIITYNTMVNGYCRAGNIDAAR----RMIDSVPFAPDTFTYNPLIRALCVRG 174
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+ +A + D M+ G P+ Y+ L+D C +A L M S GC + +Y+
Sbjct: 175 CVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYN 234
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
+LIN C ++ AL + + S G KPD V Y + L + E A KL +M +
Sbjct: 235 VLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSN 294
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
A D T+ I LC+ ++ A ++ + C DI Y+ ++DGL
Sbjct: 295 DCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGL 345
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 202/400 (50%), Gaps = 26/400 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
++D ++ + P + ++N++ L K + V +++R+ + L PD+ TY ILI+
Sbjct: 250 VWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGL 309
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ G V V I+++ +A + SL+KG C R+ EA + G N+
Sbjct: 310 CRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NL 368
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELF-LQMKDENINPDVV 181
TYN +I GL+ +G VD+A EL+ L KD PD V
Sbjct: 369 RTYNIMIKGLFDSG-----------------------MVDEAIELWDLLEKDVACIPDTV 405
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
T+ ++I G C N+A + E G Q +V +++ +++ LC G++ +A ++ + M
Sbjct: 406 TFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKM 465
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G +PN+ +YN L+ GFC R + A ++ M GC+ TV +Y+ LI+G CK ++
Sbjct: 466 DKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKY 525
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A S+ EM+ G PD+ Y +L LF +++ A ++ ++ G+ D +
Sbjct: 526 QEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNIL 585
Query: 362 IDGLCKNSYIVEAVELFRTLRILK-CELDIRAYNCLIDGL 400
I GLC + EA+ +F ++ K C ++ YN L+DGL
Sbjct: 586 IHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGL 625
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 192/392 (48%), Gaps = 32/392 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLF-----PDLYTYNILINCFCKMGRVS 69
P + S N L + + + + F L S G F P+L TYNI++ C G +
Sbjct: 117 PGIRSHNALLDAFVRARRFSDADAFFASL-SHGAFGRRIAPNLQTYNIVLRSLCARGDLD 175
Query: 70 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
+ + R P+ +T+++L+ GL + R+ A L ++ +P+V YN L+
Sbjct: 176 RAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALL 235
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRG 189
G ++ G + +++++ +KD P++ TY ++ G
Sbjct: 236 GGCFKAGEFEKVMRVWDKL----------------------VKDPGARPNLATYNVMLDG 273
Query: 190 FCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
C + E + M+ +QP+V+T+ +++ LC++G +D A+R+ +I+ G+ +
Sbjct: 274 LCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVID 333
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
A +YN+L+ GFC GRV A + + S G + +Y+I+I G + ++ A+ L+
Sbjct: 334 AAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGL-RNLRTYNIMIKGLFDSGMVDEAIELW- 391
Query: 310 EMLSKGIK--PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
++L K + PD V + TL L + +AF +F+E + G D ++Y + I+GLC
Sbjct: 392 DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCN 451
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+V+AV+++ + C+ + YN LI G
Sbjct: 452 VGRLVDAVKVYEKMDKDGCKPNSHIYNALISG 483
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 186/402 (46%), Gaps = 50/402 (12%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV------ 68
P V ++ IL L ++ D ++ + TGL D YN L+ FC+ GRV
Sbjct: 297 PDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKF 356
Query: 69 --SHGFVVLGRILRS----------------------------CFTPNAVTFTSLIKGLC 98
S GF L R LR+ P+ VTF +LI GLC
Sbjct: 357 WDSAGFAGL-RNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLC 415
Query: 99 AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG-- 156
+A +F + RV G + +VF+Y+++INGL G + A+ ++E+M +
Sbjct: 416 QNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSH 475
Query: 157 -----VEGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
+ GF A ++ +M D +P V+TY ++I G C A + EA + EM
Sbjct: 476 IYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREM 535
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
++ G P++ T+ ++ L + K+D+A + ++ G++ + ++N L+ G C G+V
Sbjct: 536 VENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKV 595
Query: 267 NRAKELFVSM-ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
+ A +F M E C + +Y+ L++G + I+ A +L+ + G++PD++ YNT
Sbjct: 596 DEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNT 655
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
L ++ +L DE+ G+ T+ + + K
Sbjct: 656 RIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIK 697
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 158/324 (48%), Gaps = 24/324 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F L L +N + ++F+ +G D+++Y+ +IN C +GR+ V
Sbjct: 402 PDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKV 461
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ + PN+ + +LI G C R +A +++K+ GC P V TYNTLI+GL +
Sbjct: 462 YEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCK 521
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
++E +S E GF PD+ TY S+IRG
Sbjct: 522 A-------EKYQEASSVAREMVENGFT----------------PDITTYGSLIRGLFSDK 558
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DLMIQIGVRPNAFVY 253
++A + +++ +G++ +V+ N+++ LC GK+DEA + D+ + PN Y
Sbjct: 559 KIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTY 618
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
NTLMDG TG +++A L+ S+ G + SY+ I G C I + L E+LS
Sbjct: 619 NTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLS 678
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVE 337
+GI P V+ +N L + + ++
Sbjct: 679 RGIIPTVITWNILVRAVIKYGPIQ 702
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 5/196 (2%)
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG----VRPNAFVYNTLMDGFCLTGR 265
G P + + N ++D + + +A + + PN YN ++ C G
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
++RA LF S+ +YS L+ G K ++ AL L EM ++PDVV YN
Sbjct: 174 LDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNA 233
Query: 326 LFVVLFEIHQVERAFKLFDEMQRD-GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
L F+ + E+ +++D++ +D G + TY +DGLCK E E++ +
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVAN 293
Query: 385 KCELDIRAYNCLIDGL 400
+ D+ Y LI GL
Sbjct: 294 NLQPDVITYGILIHGL 309
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M + PP + ++N L L + + D +L+ + GL PD+ +YN I
Sbjct: 601 VFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGL 660
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 97
C R+ G +L +L P +T+ L++ +
Sbjct: 661 CSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAV 695
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 188/398 (47%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+N + L K + V L + + P++ T+N LI+ C+ G V
Sbjct: 225 PDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEV 284
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ TP+ + ++I G+C E + A + ++ +G +PNV YNTL+ GL
Sbjct: 285 LAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCS 344
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
L EM + F G VD+ EL QM + PDV+T
Sbjct: 345 AERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVIT 404
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+VI GFC +EA LL M G +PN +++ +++ LC + +A L+ MI
Sbjct: 405 YTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMI 464
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q G N +NTL++ C G V +A EL M GC+ + SYS +I+G K + +
Sbjct: 465 QQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTD 524
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL L M++KG+ P+ +IY+++ L ++ + ++FD +Q + +D Y I
Sbjct: 525 EALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVI 584
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LCK A+E + C + Y LI GL
Sbjct: 585 SSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGL 622
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 192/385 (49%), Gaps = 21/385 (5%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P PP ++++ + + + + + + L++ G D+ N+++N C G V
Sbjct: 155 PIPP---MYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEA 211
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI-- 129
+L + P+ V++ +++KGLC R L ++ C PN+ T+NTLI
Sbjct: 212 LHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISY 271
Query: 130 ---NGLYRTGHTIVA----------LNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI 176
NGL+ H ++A + ++ + G EG ++ A E+ +M +
Sbjct: 272 LCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDG---ICKEGHLEVAHEILNRMPSYGL 328
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
P+VV Y ++++G C A W E + LL EM D+ + VTFN+++D C+NG +D
Sbjct: 329 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE 388
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
LL+ M++ G P+ Y T+++GFC G ++ A L SM + GC SY+I++ G C
Sbjct: 389 LLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 448
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
+ A L +M+ +G + + +NTL L + VE+A +L +M +G + D
Sbjct: 449 SAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 508
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTL 381
+Y T IDGL K EA+EL +
Sbjct: 509 SYSTVIDGLGKAGKTDEALELLNVM 533
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 169/358 (47%), Gaps = 15/358 (4%)
Query: 55 YNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLR 114
YN ++ +C+ G++ + + PNA T+ +++ LCA RI +A A+ ++
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 115 VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVD 162
GC P Y+ ++ R G A+ + E++ + V +G VD
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
+A L + PDVV+Y +V++G C A W + L+ EM+ PN+VTFN ++
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
LC+NG + +L M++ G P+ +Y T++DG C G + A E+ M S G
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
V Y+ L+ G C + E L EM K D V +N L + V+R +L
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++M G D TY T I+G CK I EAV L +++ C+ + +Y ++ GL
Sbjct: 390 LEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGL 447
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 178/381 (46%), Gaps = 14/381 (3%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + +FN L L +N ++ V + ++ G PD+ Y +I+ CK G +
Sbjct: 259 PPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHE 318
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L R+ PN V + +L+KGLC+ R E L ++ C + T+N L++
Sbjct: 319 ILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFC 378
Query: 134 RTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDV 180
+ G + L E+M NG F EG +D+A L M P+
Sbjct: 379 QNGLVDRVIELLEQMLERGCMPDVITYTTVING-FCKEGLIDEAVMLLKSMTACGCKPNT 437
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
++YT V++G C A W +A+ L+ +M+ QG N +TFN +++ LCK G +++A LL
Sbjct: 438 ISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQ 497
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M+ G P+ Y+T++DG G+ + A EL M + G + YS + + +
Sbjct: 498 MLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGR 557
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
I + ++ + I+ D V+YN + L + + ERA + M G + TY
Sbjct: 558 INKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTI 617
Query: 361 FIDGLCKNSYIVEAVELFRTL 381
I GL ++ EA E+ L
Sbjct: 618 LIRGLASEGFVKEAQEMLTEL 638
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 150/297 (50%), Gaps = 23/297 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+FNIL +N D V+ L +++ G PD+ TY +IN FCK G + ++L +
Sbjct: 369 TFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 428
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PN +++T ++KGLC+ R ++A L +++ GC N T+NTLIN L +
Sbjct: 429 TACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCK---- 484
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+G V++A EL QM +PD+++Y++VI G A +E
Sbjct: 485 -------------------KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDE 525
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A LL M+++G+ PN + ++ I L + G++++ ++ D + +R +A +YN ++
Sbjct: 526 ALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVIS 585
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
C G RA E M S GC +Y+ILI G ++ A + E+ SKG
Sbjct: 586 SLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
Length = 414
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 111/332 (33%), Positives = 167/332 (50%), Gaps = 25/332 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ + R P V SFN++ + + L L +R+N G PD T+NIL++
Sbjct: 68 LFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGL 127
Query: 63 CKMGRVSHGFVVLGRILRSCF-TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
C+ VS G VL R+ R PN VTFTS+I G C ++ +A A++ + G PN
Sbjct: 128 CRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPN 187
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
TYN LING +G G + A E++ QM PDVV
Sbjct: 188 TVTYNVLING-----------------------YGKVGDLGSAVEVYQQMTRLRCPPDVV 224
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DL 240
T++S+I G+C ++A + +M +QPNV TF++I+ LCK + DEA LL +L
Sbjct: 225 TFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNEL 284
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
++ + P AF+YN ++D C G+V+ A + ME GC ++Y+ILI GYC
Sbjct: 285 NLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSR 344
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
I A+ + EM+ G PD + N L +
Sbjct: 345 ISEAIMFFHEMVEAGCSPDSITVNCFISCLLK 376
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 177/370 (47%), Gaps = 26/370 (7%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRS-CFTPNAVTFTS 92
D +L + + G + Y YN L++ GRV + R ++ ++P+ +F
Sbjct: 28 DASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNV 87
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN 152
+IKG+C ++ +A L ++ FGC P+ T+N L++GL RT
Sbjct: 88 VIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNE--------------- 132
Query: 153 GEFGVEGFVDKAKELFLQMKDENI-NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
V + E+ +++ + + P+VVT+TSVI G+C A +A + +M+ G+
Sbjct: 133 --------VSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGI 184
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
PN VT+NV+++ K G + A + M ++ P+ +++L+DG+C G+++ A
Sbjct: 185 MPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALR 244
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM-LSKGIKPDVVIYNTLFVVL 330
++ M V+++SI+I+ CK + A+ L E+ L I P IYN + VL
Sbjct: 245 IWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVL 304
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
+ +V+ A + M+ G D +TY I G C S I EA+ F + C D
Sbjct: 305 CKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDS 364
Query: 391 RAYNCLIDGL 400
NC I L
Sbjct: 365 ITVNCFISCL 374
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 163/333 (48%), Gaps = 17/333 (5%)
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAA-LFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVA 141
++P+A F S + C + +++A+A L +K FGC + YN L++ L G
Sbjct: 7 YSPDA-RFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDV 65
Query: 142 LNLFEEMASGN------GEFGVE-------GFVDKAKELFLQMKDENINPDVVTYTSVIR 188
+ LFE F V G V KA EL +M + +PD VT+ ++
Sbjct: 66 VALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVD 125
Query: 189 GFCYANDWNEAKCLLIEMMDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
G C N+ + +L + GV PNVVTF ++ CK GK+++A + + M+ G+
Sbjct: 126 GLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIM 185
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
PN YN L++G+ G + A E++ M + C V ++S LI+GYC+ +++ AL +
Sbjct: 186 PNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRI 245
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ-RDGVAADTWTYRTFIDGLC 366
+ +M I+P+V ++ + L + ++ + A L +E+ R +A + Y ID LC
Sbjct: 246 WSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLC 305
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
K + EA + + + C D Y LI G
Sbjct: 306 KCGKVDEANLIRKGMEEKGCRPDKYTYTILIIG 338
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 118/240 (49%), Gaps = 15/240 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +F + K + ++++ + ++G+ P+ TYN+LIN + K+G + V
Sbjct: 151 PNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEV 210
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ R P+ VTF+SLI G C ++ +A +++ + +PNV+T++ +I+ L +
Sbjct: 211 YQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCK 270
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF--------------VDKAKELFLQMKDENINPDV 180
+ A+ L E+ + + + F VD+A + M+++ PD
Sbjct: 271 QNRSDEAIGLLNEL-NLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDK 329
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
TYT +I G+C + +EA EM++ G P+ +T N + L K G +E ++ L
Sbjct: 330 YTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVMRL 389
>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
Length = 472
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 123/384 (32%), Positives = 184/384 (47%), Gaps = 20/384 (5%)
Query: 36 VLSLFKRLNSTG-----LFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTF 90
++LF R S L P YTY IL++C + R G++LR+ +A+
Sbjct: 56 AVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIA 115
Query: 91 TSLIKGLCAESRIMEA-AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
+ L+KG C R EA L + GC P+VF+YN L+ L G + A NL MA
Sbjct: 116 SHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMA 175
Query: 150 SGN--------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
G F EG V+KA +LF +M I PD+VTY SV+ C A
Sbjct: 176 EGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARA 235
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
++A+ L +M+++ V PN T+N ++ G+ EA R+ M + + P+ +
Sbjct: 236 MDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSM 295
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
LM C G++ A+++F +M G VFSY+I++NGY + L+ ML G
Sbjct: 296 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDG 355
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
I PD +N +++A +F+EM+ GV D TYRT I LC+ + +A+
Sbjct: 356 IAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM 415
Query: 376 ELFRTLRILKCELDIRAYNCLIDG 399
E F + D AYNCLI G
Sbjct: 416 EKFNQMIDQGVAPDKYAYNCLIQG 439
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 115/232 (49%), Gaps = 14/232 (6%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP + ++N + L K + D + +++ + + P+ +TYN LI + G+
Sbjct: 214 RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKE 273
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
V + R P+ VT + L+ LC +I EA +F + + G P+VF+YN ++N
Sbjct: 274 AVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLN 333
Query: 131 GLYRTGHTIVALNLFEEMASGNG------EFGVE-------GFVDKAKELFLQMKDENIN 177
G G + +LF+ M G+G F V+ G +DKA +F +M+D +
Sbjct: 334 GYATKGCLVDMTDLFDLML-GDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVK 392
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
PDVVTY +VI C ++A +M+DQGV P+ +N ++ C +G
Sbjct: 393 PDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHG 444
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M M+ P V S+NI+ A + LF + G+ PD YT+N+ I +
Sbjct: 312 VFDTMA-MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAY 370
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
G + ++ + P+ VT+ ++I LC ++ +A F ++ G P+
Sbjct: 371 ANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 430
Query: 123 FTYNTLINGLYRTG 136
+ YN LI G G
Sbjct: 431 YAYNCLIQGFCTHG 444
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 202/400 (50%), Gaps = 26/400 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
++D ++ + P + ++N++ L K + V +++R+ + L PD+ TY ILI+
Sbjct: 250 VWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGL 309
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ G V V I+++ +A + SL+KG C R+ EA + G N+
Sbjct: 310 CRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NL 368
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELF-LQMKDENINPDVV 181
TYN +I GL+ +G VD+A EL+ L KD PD V
Sbjct: 369 RTYNIMIKGLFDSG-----------------------MVDEAIELWDLLEKDVACIPDTV 405
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
T+ ++I G C N+A + E G Q +V +++ +++ LC G++ +A ++ + M
Sbjct: 406 TFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKM 465
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G +PN+ +YN L+ GFC R + A ++ M GC+ TV +Y+ LI+G CK ++
Sbjct: 466 DKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKY 525
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A S+ EM+ G PD+ Y +L LF +++ A ++ ++ G+ D +
Sbjct: 526 QEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNIL 585
Query: 362 IDGLCKNSYIVEAVELFRTLRILK-CELDIRAYNCLIDGL 400
I GLC + EA+ +F ++ K C ++ YN L+DGL
Sbjct: 586 IHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGL 625
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 193/392 (49%), Gaps = 32/392 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLF-----PDLYTYNILINCFCKMGRVS 69
P + S N L + + + + F L S G F P+L TYNI++ C G +
Sbjct: 117 PGIRSHNALLDAFVRARRFSDADAFFASL-SHGAFGRRIAPNLQTYNIVLRSLCARGDLD 175
Query: 70 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
+ + R P+ +T+++L+ GL + R+ A L ++ G +P+V YN L+
Sbjct: 176 RAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALL 235
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRG 189
G ++ G + +++++ +KD P++ TY ++ G
Sbjct: 236 GGCFKAGEFEKVMRVWDKL----------------------VKDPGARPNLATYNVMLDG 273
Query: 190 FCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
C + E + M+ +QP+V+T+ +++ LC++G +D A+R+ +I+ G+ +
Sbjct: 274 LCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVID 333
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
A +YN+L+ GFC GRV A + + S G + +Y+I+I G + ++ A+ L+
Sbjct: 334 AAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGL-RNLRTYNIMIKGLFDSGMVDEAIELW- 391
Query: 310 EMLSKGIK--PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
++L K + PD V + TL L + +AF +F+E + G D ++Y + I+GLC
Sbjct: 392 DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCN 451
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+V+AV+++ + C+ + YN LI G
Sbjct: 452 VGRLVDAVKVYEKMDKDGCKPNSHIYNALISG 483
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 186/402 (46%), Gaps = 50/402 (12%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV------ 68
P V ++ IL L ++ D ++ + TGL D YN L+ FC+ GRV
Sbjct: 297 PDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKF 356
Query: 69 --SHGFVVLGRILRS----------------------------CFTPNAVTFTSLIKGLC 98
S GF L R LR+ P+ VTF +LI GLC
Sbjct: 357 WDSAGFAGL-RNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLC 415
Query: 99 AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG-- 156
+A +F + RV G + +VF+Y+++INGL G + A+ ++E+M +
Sbjct: 416 QNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSH 475
Query: 157 -----VEGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
+ GF A ++ +M D +P V+TY ++I G C A + EA + EM
Sbjct: 476 IYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREM 535
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
++ G P++ T+ ++ L + K+D+A + ++ G++ + ++N L+ G C G+V
Sbjct: 536 VENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKV 595
Query: 267 NRAKELFVSM-ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
+ A +F M E C + +Y+ L++G + I+ A +L+ + G++PD++ YNT
Sbjct: 596 DEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNT 655
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
L ++ +L DE+ G+ T+ + + K
Sbjct: 656 RIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIK 697
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 158/324 (48%), Gaps = 24/324 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F L L +N + ++F+ +G D+++Y+ +IN C +GR+ V
Sbjct: 402 PDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKV 461
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ + PN+ + +LI G C R +A +++K+ GC P V TYNTLI+GL +
Sbjct: 462 YEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCK 521
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
++E +S E GF PD+ TY S+IRG
Sbjct: 522 A-------EKYQEASSVAREMVENGFT----------------PDITTYGSLIRGLFSDK 558
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DLMIQIGVRPNAFVY 253
++A + +++ +G++ +V+ N+++ LC GK+DEA + D+ + PN Y
Sbjct: 559 KIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTY 618
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
NTLMDG TG +++A L+ S+ G + SY+ I G C I + L E+LS
Sbjct: 619 NTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLS 678
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVE 337
+GI P V+ +N L + + ++
Sbjct: 679 RGIIPTVITWNILVRAVIKYGPIQ 702
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 5/196 (2%)
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG----VRPNAFVYNTLMDGFCLTGR 265
G P + + N ++D + + +A + + PN YN ++ C G
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
++RA LF S+ +YS L+ G K ++ AL L EM G++PDVV YN
Sbjct: 174 LDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNA 233
Query: 326 LFVVLFEIHQVERAFKLFDEMQRD-GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
L F+ + E+ +++D++ +D G + TY +DGLCK E E++ +
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVAN 293
Query: 385 KCELDIRAYNCLIDGL 400
+ D+ Y LI GL
Sbjct: 294 NLQPDVITYGILIHGL 309
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M + PP + ++N L L + + D +L+ + GL PD+ +YN I
Sbjct: 601 VFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGL 660
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 97
C R+ G +L +L P +T+ L++ +
Sbjct: 661 CSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAV 695
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 207/401 (51%), Gaps = 28/401 (6%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDT-----VLSLFKRLNSTGLFPDLYTYNILINC 61
+LN PS C N + C + Y+ LF ++ G+FP + T+N L++
Sbjct: 168 LLNNMPSQG--CELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHI 225
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC-------AESRIMEAAALFTKLR 114
CK G + G +L ++L++ PN TF I+GLC A S+++EA K+
Sbjct: 226 LCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMV 285
Query: 115 VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG----EF-------GV--EGFV 161
G EP+ FTYNT+I G + G A + ++ A G EF GV +G +
Sbjct: 286 NKGLEPDDFTYNTIIYGYSKVGKIQDASRILKD-AKFKGFVPDEFTYCSLIIGVCQDGDI 344
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
D A LF + + + P +V Y ++I+G +A L+ +M +G+ P++ T+N++
Sbjct: 345 DHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLV 404
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
++ LCK G + +A+ LL+ I G P+ F +NTL+DG+C +++ A + SM S G
Sbjct: 405 INGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGV 464
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
T V +Y+ ++NG CK + E + + ++ KG P+++ YN L L + +V A
Sbjct: 465 TPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALD 524
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
L +E++ G+ D ++ T I G C N + EA +LFR +
Sbjct: 525 LLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRME 565
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 178/371 (47%), Gaps = 30/371 (8%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 95
+ +F+R++ P +++YN ++N + G + V R+ P+ TFT IK
Sbjct: 95 AVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIK 154
Query: 96 GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEF 155
C R + A L + GCE N Y T+I+G Y + +
Sbjct: 155 SFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQV---------------- 198
Query: 156 GVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNV 215
+A ELF +M I P + T+ ++ C E + LL +++ GV PN+
Sbjct: 199 -------EAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNL 251
Query: 216 VTFNVIMDELCKNG-------KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
TFN+ + LC+ G K+ EA L M+ G+ P+ F YNT++ G+ G++
Sbjct: 252 FTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQD 311
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
A + + G F+Y LI G C++ +I+ AL+L+ E L KG+KP +V+YNTL
Sbjct: 312 ASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIK 371
Query: 329 VLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
L + V +A +L ++M ++G++ D WTY I+GLCK + +A L
Sbjct: 372 GLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLP 431
Query: 389 DIRAYNCLIDG 399
DI +N LIDG
Sbjct: 432 DIFTFNTLIDG 442
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 195/405 (48%), Gaps = 19/405 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S+N + L + +++ ++ R+ G+ PD+ T+ I I FC+ R +
Sbjct: 109 PSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRL 168
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + NAV + ++I G E+ +EA LF K+ G P++ T+N L++ L +
Sbjct: 169 LNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCK 228
Query: 135 TGH------------------TIVALNLFEEMASGNGEF-GVEGFVDKAKELFLQMKDEN 175
GH + N+F + G G V +A+ +M ++
Sbjct: 229 KGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKG 288
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+ PD TY ++I G+ +A +L + +G P+ T+ ++ +C++G +D A
Sbjct: 289 LEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHAL 348
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
L + + G++P+ +YNTL+ G G V +A +L M G + +++Y+++ING
Sbjct: 349 ALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGL 408
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
CK + A +L ++KG PD+ +NTL + +++ A + D M GV D
Sbjct: 409 CKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDV 468
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY + ++GLCK + + +E F+ + C +I YN LI+ L
Sbjct: 469 ITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESL 513
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 170/387 (43%), Gaps = 29/387 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +N L L++ L L ++ G+ PD++TYN++IN CKMG VS +
Sbjct: 361 PSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNL 420
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + P+ TF +LI G C ++ A + + G P+V TYN+++NGL +
Sbjct: 421 LNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCK 480
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ E F + ++ P+++TY +I C A
Sbjct: 481 AAKP-----------------------EDVMETFKMIMEKGCLPNIITYNILIESLCKAR 517
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM-IQIGVRPNAFVY 253
EA LL E+ ++G+ P+ V+F ++ C NG +DEA +L M Q + Y
Sbjct: 518 KVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATY 577
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N +++ F ++ A++LF M GC ++Y ++I+G+CK + + +
Sbjct: 578 NIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIE 637
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
G P + + + L H+V A + M R GV + T D + V
Sbjct: 638 IGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVV--TIFDA---DKKAVA 692
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A ++ + K + AY L DG+
Sbjct: 693 APKIIVEDLLKKSHITYYAYELLYDGI 719
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 142/301 (47%), Gaps = 19/301 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +FN L K D + + + S G+ PD+ TYN ++N CK +
Sbjct: 431 PDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMET 490
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
I+ PN +T+ LI+ LC ++ EA L ++R G P+ ++ T+I+G
Sbjct: 491 FKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCN 550
Query: 135 TGHTIVALNLFEEM----------ASGN---GEFGVEGFVDKAKELFLQMKDENINPDVV 181
G A LF M A+ N F + +D A++LF +M D+ +PD
Sbjct: 551 NGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSY 610
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY +I GFC + N L++ ++ G P++ TF +++ LC ++ EA ++ LM
Sbjct: 611 TYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLM 670
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++ GV P A V T+ D + A ++ V T ++Y +L +G +NK++
Sbjct: 671 VRTGVVPEAVV--TIFDA---DKKAVAAPKIIVEDLLKKSHITYYAYELLYDG-IRNKKL 724
Query: 302 E 302
+
Sbjct: 725 Q 725
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 122/256 (47%), Gaps = 12/256 (4%)
Query: 154 EFGVEGFVDKAKELFLQMKDENINPDVV--TYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
+ G G D + + ++M+ N++ ++ Y S +R + EA + M
Sbjct: 49 KLGFHGEFDAMERVLMEMR-LNVDNSLLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNC 107
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
+P++ ++N IM+ L + G ++A ++ M G+ P+ + + FC T R A
Sbjct: 108 EPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALR 167
Query: 272 LFVSMESMGCTHTVFSYSILING-YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
L +M S GC Y +I+G Y +N ++E A L+ +ML GI P + +N L +L
Sbjct: 168 LLNNMPSQGCELNAVVYCTVISGFYEENYQVE-AYELFNKMLRLGIFPHIATFNKLMHIL 226
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK-------NSYIVEAVELFRTLRI 383
+ ++ KL +++ ++GV + +T+ FI GLC+ NS +VEA +
Sbjct: 227 CKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVN 286
Query: 384 LKCELDIRAYNCLIDG 399
E D YN +I G
Sbjct: 287 KGLEPDDFTYNTIIYG 302
>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 884
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 202/406 (49%), Gaps = 19/406 (4%)
Query: 10 MRPSPPPV-CSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV 68
+R P P +FNI+ C + + SL + PD+Y YNILIN + GR
Sbjct: 270 IRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRT 329
Query: 69 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTL 128
S L ++++ P+ +TF+++I C E ++EA +F ++ G PNV YNTL
Sbjct: 330 SDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTL 389
Query: 129 INGLYRTGHTIVALNLFEEM---------------ASGNGEFGVEGFVDKAKELFLQMKD 173
++G ++ A L+EEM +GN ++G E + ELF
Sbjct: 390 MSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEA---DSYELFRDWSL 446
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
++ PD Y + G C+A +EA L +M+++G+ P+VV FN ++ + G D
Sbjct: 447 SSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDN 506
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A + +M+ G+ P++ ++++ G GR+ A++L M G ++++L++
Sbjct: 507 AHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLD 566
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
GY K + GA SL+ EM ++GI PD + ++ L + VE A++ F EM + G
Sbjct: 567 GYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVP 626
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + Y + I GLC + EA++L R +R DI N +I+G
Sbjct: 627 NNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIING 672
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 178/398 (44%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N L K + L++ + G+ PD T+NIL+ K G+ + + +
Sbjct: 381 PNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYEL 440
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
S P+ + + GLC ++ EA + G P+V +N++I R
Sbjct: 441 FRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSR 500
Query: 135 TG-----HTIVALNLFEEMASGNGE-------FGVEGFVDKAKELFLQMKDENINPDVVT 182
G H + L + + +G + +A++L +M D+ + + V
Sbjct: 501 AGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVA 560
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+T ++ G+ D A L EM +G+ P+ + F+ +D L K G ++EA M
Sbjct: 561 FTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMS 620
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G PN FVYN+L+ G C G+++ A +L M G +F+ +I+ING+CK ++
Sbjct: 621 KKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMK 680
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A + EM G+ PD V YNTL ++ + A + ++M G D TY I
Sbjct: 681 SAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRI 740
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G C + I AV + L + + YN +++ +
Sbjct: 741 QGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAV 778
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 162/367 (44%), Gaps = 14/367 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FNIL K LF+ + + L PD Y++ + C G++
Sbjct: 416 PDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQF 475
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L P+ V F S+I A + + +FG P+ T ++++ GL +
Sbjct: 476 LEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSK 535
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G A +L +M +G F V G A L+ +M+ I PD +
Sbjct: 536 KGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKV-GDTAGAHSLWYEMEARGICPDAI 594
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+++ I G A EA EM +G PN +N ++ LC GK+ EA +L M
Sbjct: 595 AFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREM 654
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
Q G+ P+ F N +++GFC GR+ A + F M +G T +Y+ LI GYCK ++
Sbjct: 655 RQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDM 714
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A +M + G PD+ YN ++ RA + DE+ GV +T TY T
Sbjct: 715 VSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTM 774
Query: 362 IDGLCKN 368
++ +C +
Sbjct: 775 MNAVCTD 781
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 111/264 (42%), Gaps = 24/264 (9%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
Y + R P +F+ L+K + F ++ G P+ + YN LI+ C
Sbjct: 582 YEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNC 641
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
G++ + + + P+ T +I G C E R+ A F ++ G P+ TY
Sbjct: 642 GKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTY 701
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
NTLI G + + A E +M +PD+ TY
Sbjct: 702 NTLIGGYCKVLDMV-----------------------SADEFLNKMYASGWDPDITTYNI 738
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
I+GFC + + A +L E++ GV PN VT+N +M+ +C + +D A L ++++
Sbjct: 739 RIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCTD-MLDRAMVLTAKLLKMA 797
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRA 269
PN N L+ FC G +A
Sbjct: 798 FVPNVVTTNVLLSHFCKQGMPEKA 821
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 109/235 (46%)
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
E+ +M++ + P + + R D+ LL M+ G +P FN+++
Sbjct: 229 EILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRDGPRPCNHNFNIMILCF 288
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
C+ G + A LL +M + P+ + YN L++ + + GR + A M GC ++
Sbjct: 289 CQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSL 348
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
++S +I +C + A ++ + G+ P+V +YNTL F+ V +A L++E
Sbjct: 349 ITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEE 408
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
M+ G+A D T+ + G K ++ ELFR + D Y+ + GL
Sbjct: 409 MRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGL 463
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 133/306 (43%), Gaps = 23/306 (7%)
Query: 92 SLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG 151
+L++G E+ + +++R G P+ + L L R G
Sbjct: 213 TLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVG--------------- 257
Query: 152 NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
++G +L M + P + +I FC A+ LL M
Sbjct: 258 --DYG------SVWKLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCC 309
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
+P+V +N++++ G+ +A L LMI+ G +P+ ++T++ FC G V A++
Sbjct: 310 EPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARK 369
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
+F ++ +G + V Y+ L++GY K +++ A LY EM KGI PD +N L +
Sbjct: 370 IFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNY 429
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIR 391
+ + +++LF + + D Y + GLC + EA++ + +
Sbjct: 430 KYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVV 489
Query: 392 AYNCLI 397
A+N +I
Sbjct: 490 AFNSVI 495
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 102/232 (43%)
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
F+ D +++RGF + E+ +L M + GV+P+ +++ L +
Sbjct: 196 FMWANHHKYESDFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLR 255
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
G +LL MI+ G RP +N ++ FC G + A+ L M C V++
Sbjct: 256 VGDYGSVWKLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYA 315
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y+ILIN Y AL M+ G KP ++ ++T+ V A K+F+ +Q
Sbjct: 316 YNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQ 375
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G++ + Y T + G K + +A L+ +R D +N L+ G
Sbjct: 376 EVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAG 427
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 193/395 (48%), Gaps = 9/395 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +F ++ L D+ +L K + G P+ Y LI+ K+GRV+ +
Sbjct: 215 PTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKL 274
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L P+ TF I GLC RI EAA L ++ + G PN FTY L++GL R
Sbjct: 275 LEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCR 334
Query: 135 TGHTIVALNLFEEMASGN--------GEFGVEGFVDKAKELFLQ-MKDENINPDVVTYTS 185
G A L ++ + N + G +D+AK + + M PD+ TY +
Sbjct: 335 MGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNT 394
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I G C A+ L+ EM +G +PNV+T+ +++D CK G+++EA +LD M G
Sbjct: 395 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 454
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
+ NA YN L+ C +V A +F M S GC +F+++ LI G CK + E AL
Sbjct: 455 LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEAL 514
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
LY +ML +G+ + + YNTL ++ A KL ++M G D TY I L
Sbjct: 515 GLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKAL 574
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
C+ I + + LF + + + N LI+GL
Sbjct: 575 CRAGNIEKGLALFEDMMSKGLNPNNISCNILINGL 609
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 205/410 (50%), Gaps = 20/410 (4%)
Query: 7 MLNMR---PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
+L+MR P S+N++ L V ++F + S G+ P +YT+ +++ C
Sbjct: 169 LLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALC 228
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ V +L + R PNA+ + +LI L R+ E L ++ + GC P+V
Sbjct: 229 LVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVN 288
Query: 124 TYNTLINGLYRTGHTIVALNLFEEM-----ASGNGEFGV-------EGFVDKAKELFLQM 171
T+N I+GL + A L + M + +GV G VD+A+ L ++
Sbjct: 289 TFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV 348
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE-MMDQGVQPNVVTFNVIMDELCKNGK 230
NP+VV + ++I G+ +EAK ++ E M+ G P++ T+N ++ LCK G
Sbjct: 349 P----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGY 404
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ A L++ M G PN Y L+D FC GR+ A+ + M G Y+
Sbjct: 405 LVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNC 464
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI+ CK+++++ AL+++G+M SKG KPD+ +N+L L ++++ E A L+ +M +G
Sbjct: 465 LISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG 524
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
V A+T TY T I + + EA++L + C LD YN LI L
Sbjct: 525 VIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKAL 574
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 185/404 (45%), Gaps = 44/404 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS----- 69
P V +FN L K L R+ G P+ +TY +L++ C+MG+V
Sbjct: 285 PDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML 344
Query: 70 ----------------HGFVVLGRI-----------LRSCFTPNAVTFTSLIKGLCAESR 102
+G+V GR+ L P+ T+ +LI GLC +
Sbjct: 345 LNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGY 404
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF-- 160
++ A L ++++ GCEPNV TY LI+ + G A N+ +EM+ G+
Sbjct: 405 LVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNC 464
Query: 161 ----------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG 210
V A +F M + PD+ T+ S+I G C N + EA L +M+ +G
Sbjct: 465 LISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG 524
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
V N +T+N ++ + G M EA +L++ M+ G + YN L+ C G + +
Sbjct: 525 VIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGL 584
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
LF M S G S +ILING C+ I+ AL +M+ +G+ PD+V YN+L L
Sbjct: 585 ALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGL 644
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
+ + + A LFD++Q +G+ D TY T I CK +A
Sbjct: 645 CKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDA 688
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 154/324 (47%), Gaps = 12/324 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N L L K + + L + G P++ TY ILI+ FCK GR+ V
Sbjct: 387 PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 446
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + NAV + LI LC + ++ +A +F + GC+P++FT+N+LI GL +
Sbjct: 447 LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 506
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
AL L+++M F G + +A +L M D +T
Sbjct: 507 VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT 566
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I+ C A + + L +MM +G+ PN ++ N++++ LC+ G + A L MI
Sbjct: 567 YNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMI 626
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ P+ YN+L++G C TGR A LF ++ G +Y+ LI+ +CK +
Sbjct: 627 HRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFD 686
Query: 303 GALSLYGEMLSKGIKPDVVIYNTL 326
A L + G P+ V + L
Sbjct: 687 DAHLLLSRGVDSGFIPNEVTWYIL 710
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 150/341 (43%), Gaps = 45/341 (13%)
Query: 105 EAAALFTKLR-VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF--- 160
+A L +R V+ CEP +YN +++ L V N+F EM S V F
Sbjct: 164 QATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVV 223
Query: 161 ---------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
VD A L M P+ + Y ++I NE LL EM+ G
Sbjct: 224 MKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGC 283
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
P+V TFN + LCK ++ EA++L+D M+ G PN+F Y LM G C G+V+ A+
Sbjct: 284 IPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARM 343
Query: 272 LF--------------------------------VSMESMGCTHTVFSYSILINGYCKNK 299
L SM S+GC +F+Y+ LI G CK
Sbjct: 344 LLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKG 403
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
+ A L EM KG +P+V+ Y L + ++E A + DEM G+A + Y
Sbjct: 404 YLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYN 463
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I LCK+ + +A+ +F + C+ DI +N LI GL
Sbjct: 464 CLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGL 504
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 140/307 (45%), Gaps = 12/307 (3%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ ++ P V ++ IL K + ++ ++ GL + YN LI+ CK +
Sbjct: 415 MQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEK 474
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V + G + P+ TF SLI GLC ++ EA L+ + + G N TYNT
Sbjct: 475 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 534
Query: 128 LINGLYRTGHTIVALNLFEEM---------ASGNGEFGV---EGFVDKAKELFLQMKDEN 175
LI+ R G AL L +M + NG G ++K LF M +
Sbjct: 535 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 594
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+NP+ ++ +I G C + A L +M+ +G+ P++VT+N +++ LCK G+ EA
Sbjct: 595 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 654
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
L D + G+ P+A YNTL+ C G + A L G ++ IL++ +
Sbjct: 655 NLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNF 714
Query: 296 CKNKEIE 302
K + E
Sbjct: 715 IKEGDQE 721
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 117/278 (42%), Gaps = 33/278 (11%)
Query: 154 EFGVEGFVDKAKELFLQMKD-ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
+G G +A L L M+ + P +Y V+ N + EM+ +G+
Sbjct: 155 HYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGIS 214
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
P V TF V+M LC ++D A LL M + G PNA VY TL+ GRVN +L
Sbjct: 215 PTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKL 274
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
M MGC V +++ I+G CK I A L ML +G P+ Y L L
Sbjct: 275 LEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCR 334
Query: 333 IHQVERAFKLFDE--------------------------------MQRDGVAADTWTYRT 360
+ +V+ A L ++ M G D +TY T
Sbjct: 335 MGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNT 394
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
I GLCK Y+V A EL ++I CE ++ Y LID
Sbjct: 395 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILID 432
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 188/398 (47%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+N + L K + V L + + P++ T+N LI+ C+ G V
Sbjct: 262 PDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEV 321
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ TP+ + ++I G+C E + A + ++ +G +PNV YNTL+ GL
Sbjct: 322 LAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCS 381
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
L EM + F G VD+ EL QM + PDV+T
Sbjct: 382 AERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVIT 441
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+VI GFC +EA LL M G +PN +++ +++ LC + +A L+ MI
Sbjct: 442 YTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMI 501
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q G N +NTL++ C G V +A EL M GC+ + SYS +I+G K + +
Sbjct: 502 QQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTD 561
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL L M++KG+ P+ +IY+++ L ++ + ++FD +Q + +D Y I
Sbjct: 562 EALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVI 621
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LCK A+E + C + Y LI GL
Sbjct: 622 SSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGL 659
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 192/385 (49%), Gaps = 21/385 (5%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P PP ++++ + + + + + + L++ G D+ N+++N C G V
Sbjct: 192 PIPP---MYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEA 248
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI-- 129
+L + P+ V++ +++KGLC R L ++ C PN+ T+NTLI
Sbjct: 249 LHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISY 308
Query: 130 ---NGLYRTGHTIVA----------LNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI 176
NGL+ H ++A + ++ + G EG ++ A E+ +M +
Sbjct: 309 LCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDG---ICKEGHLEVAHEILNRMPSYGL 365
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
P+VV Y ++++G C A W E + LL EM D+ + VTFN+++D C+NG +D
Sbjct: 366 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE 425
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
LL+ M++ G P+ Y T+++GFC G ++ A L SM + GC SY+I++ G C
Sbjct: 426 LLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 485
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
+ A L +M+ +G + + +NTL L + VE+A +L +M +G + D
Sbjct: 486 SAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 545
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTL 381
+Y T IDGL K EA+EL +
Sbjct: 546 SYSTVIDGLGKAGKTDEALELLNVM 570
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 169/358 (47%), Gaps = 15/358 (4%)
Query: 55 YNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLR 114
YN ++ +C+ G++ + + PNA T+ +++ LCA RI +A A+ ++
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 186
Query: 115 VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVD 162
GC P Y+ ++ R G A+ + E++ + V +G VD
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
+A L + PDVV+Y +V++G C A W + L+ EM+ PN+VTFN ++
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
LC+NG + +L M++ G P+ +Y T++DG C G + A E+ M S G
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
V Y+ L+ G C + E L EM K D V +N L + V+R +L
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 426
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++M G D TY T I+G CK I EAV L +++ C+ + +Y ++ GL
Sbjct: 427 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGL 484
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 178/381 (46%), Gaps = 14/381 (3%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + +FN L L +N ++ V + ++ G PD+ Y +I+ CK G +
Sbjct: 296 PPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHE 355
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L R+ PN V + +L+KGLC+ R E L ++ C + T+N L++
Sbjct: 356 ILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFC 415
Query: 134 RTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDV 180
+ G + L E+M NG F EG +D+A L M P+
Sbjct: 416 QNGLVDRVIELLEQMLEHGCMPDVITYTTVING-FCKEGLIDEAVMLLKSMTACGCKPNT 474
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
++YT V++G C A W +A+ L+ +M+ QG N +TFN +++ LCK G +++A LL
Sbjct: 475 ISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQ 534
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M+ G P+ Y+T++DG G+ + A EL M + G + YS + + +
Sbjct: 535 MLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGR 594
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
I + ++ + I+ D V+YN + L + + ERA + M G + TY
Sbjct: 595 INKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTI 654
Query: 361 FIDGLCKNSYIVEAVELFRTL 381
I GL ++ EA E+ L
Sbjct: 655 LIRGLASEGFVKEAQEMLTEL 675
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 150/297 (50%), Gaps = 23/297 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+FNIL +N D V+ L +++ G PD+ TY +IN FCK G + ++L +
Sbjct: 406 TFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 465
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PN +++T ++KGLC+ R ++A L +++ GC N T+NTLIN L +
Sbjct: 466 TACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCK---- 521
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+G V++A EL QM +PD+++Y++VI G A +E
Sbjct: 522 -------------------KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDE 562
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A LL M+++G+ PN + ++ I L + G++++ ++ D + +R +A +YN ++
Sbjct: 563 ALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVIS 622
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
C G RA E M S GC +Y+ILI G ++ A + E+ SKG
Sbjct: 623 SLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 679
>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
Length = 625
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 195/399 (48%), Gaps = 15/399 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ +FD ML+ PSP V +++ + L+K + D +F R+ G+ PD Y L++
Sbjct: 228 YSLFDAMLDRGPSPD-VVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVH 286
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+C G+ + ++ R P+ VT+T+L+ LC + EA +F L G +P
Sbjct: 287 GYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKP 346
Query: 121 NVFTYNTLINGLYRTG-----HTIVALNLFEEMASGN-------GEFGVEGFVDKAKELF 168
+ TY TL++G G H ++ L + + M G+ G + VD+A +F
Sbjct: 347 DSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVF 406
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
M+ + +NPD+V Y +V+ C A ++A + +G+ PN+V F ++ LC
Sbjct: 407 SNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTC 466
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
K D+ L MI G+ + +N +M C GRV AK LF M +G +Y
Sbjct: 467 DKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTY 526
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ LI+GYC + +++ A+ L G M+ G+KP V YNT+ + ++E L EM
Sbjct: 527 NTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDG 586
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
GV TY + GL + V A EL+ LR++K +
Sbjct: 587 KGVNPGIVTYEMLLQGLFQAGRTVAAKELY--LRMIKWD 623
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 183/415 (44%), Gaps = 82/415 (19%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P V ++ + L + D SLF + G PD+ TY+ +I+ K +
Sbjct: 205 PLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQ 264
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
V R++++ P+ + +TSL+ G C+ + EA +F K+ G EP+V TY L++ L
Sbjct: 265 VFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLC 324
Query: 134 RTGHTIVALNLFEEMASGN----------------------------------------- 152
+ G + A +F+ +
Sbjct: 325 KNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHH 384
Query: 153 ------GEFGVEGFVDKAKELFLQMKDENINPDVVTY----------------------- 183
G + VD+A +F M+ + +NPD+V Y
Sbjct: 385 IFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSL 444
Query: 184 ------------TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
T++I G C + W++ + L EM+D+G+ + + FN IM LCK G++
Sbjct: 445 KSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRV 504
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA L DLM++IG+ PN YNTL+DG+CL G+++ A +L M G + +Y+ +
Sbjct: 505 IEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTI 564
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
INGY +N IE L+L EM KG+ P +V Y L LF+ + A +L+ M
Sbjct: 565 INGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRM 619
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 199/453 (43%), Gaps = 89/453 (19%)
Query: 36 VLSLFKRL---NSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCF--TPNAVTF 90
+SLF R+ +T P++ TY I+I C ++GR+ F +GR++ + PN +
Sbjct: 80 AISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQS 139
Query: 91 TSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS 150
+S A R M + ++ GC+P++F+Y L+ GL + AL+L MA
Sbjct: 140 SSQGPLCTAGGRAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMAD 199
Query: 151 GNGEFGV--------------EGFVDKAKELFLQMKDENINPDVVTYTSVI--------- 187
G + EG +DKA LF M D +PDVVTY+S+I
Sbjct: 200 HKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAM 259
Query: 188 --------------------------RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
G+C + EA + +M GV+P+VVT+ +
Sbjct: 260 DKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTAL 319
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
MD LCKNGK EA ++ D +++ G +P++ Y TL+ G+ G + +L M G
Sbjct: 320 MDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGM 379
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
+++++ Y K+ +++ AL ++ M +G+ PD+V Y T+ +L +V+ A
Sbjct: 380 QLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALS 439
Query: 342 LFDEMQRDGVAADTWTYRTFIDG-----------------------------------LC 366
F+ ++ +G+A + + T I G LC
Sbjct: 440 QFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLC 499
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
K ++EA LF + + E + YN LIDG
Sbjct: 500 KKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDG 532
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 113/334 (33%), Positives = 174/334 (52%), Gaps = 17/334 (5%)
Query: 15 PPVCSFNILFGCLAKN----KHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
P V ++N L K K Y + K + + + P+ T+N LI+ FCK V+
Sbjct: 233 PNVVTYNTLVDGYCKRGSAGKMYKAE-AFMKEMLANKICPNEVTFNTLIDGFCKDENVAA 291
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ + PN VT+ SLI GLC ++ EA L+ K+ G +PN+ TYN LIN
Sbjct: 292 AKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALIN 351
Query: 131 GLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINP 178
G + A +F++++ + EG +++ L M DE I P
Sbjct: 352 GFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILP 411
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
+V TY +I G C D AK LL EM ++G++ +VVT+N+++D LCKN K A +LL
Sbjct: 412 NVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLL 471
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
+ M +G++PN YNTLMDG+C+ G++ A + ME V +Y++LI GYCK
Sbjct: 472 NEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKI 531
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
++E A L EML KG+ P+ Y+ + + + E
Sbjct: 532 NKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLE 565
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 183/389 (47%), Gaps = 21/389 (5%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
RP + ++L KN F R G L + N L++ K ++
Sbjct: 125 RPGATALI-IDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGD 183
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
V +++ N TF I GLC ++ +A ++ +G PNV TYNTL++
Sbjct: 184 VEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVD 243
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
G + G G + KA+ +M I P+ VT+ ++I GF
Sbjct: 244 GYCKRGSA--------------------GKMYKAEAFMKEMLANKICPNEVTFNTLIDGF 283
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C + AK EM QG++PN+VT+N +++ LC NGK++EA L D M+ +G++PN
Sbjct: 284 CKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNI 343
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
YN L++GFC + A ++F + V +++ +I+ YCK +E SL
Sbjct: 344 VTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSS 403
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
ML +GI P+V YN L L ++ A +L +EM+ G+ D TY IDGLCKN
Sbjct: 404 MLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDK 463
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDG 399
A +L + L + + YN L+DG
Sbjct: 464 SRNAEKLLNEMFNLGLKPNHVTYNTLMDG 492
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 178/366 (48%), Gaps = 15/366 (4%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ S N L L K V ++K + + +L T+NI IN C+ G+++ +
Sbjct: 165 LTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIE 224
Query: 77 RILRSCFTPNAVTFTSLIKGLC---AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ +PN VT+ +L+ G C + ++ +A A ++ PN T+NTLI+G
Sbjct: 225 DMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFC 284
Query: 134 RTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVV 181
+ + A FEEM + + G +++A +L+ +M + P++V
Sbjct: 285 KDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIV 344
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY ++I GFC EA + ++ Q + PNV+TFN ++D CK G M+E L M
Sbjct: 345 TYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSM 404
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G+ PN YN L+ G C + AKEL ME+ G V +Y+ILI+G CKN +
Sbjct: 405 LDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKS 464
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A L EM + G+KP+ V YNTL +++ A + M+++ + TY
Sbjct: 465 RNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVL 524
Query: 362 IDGLCK 367
I G CK
Sbjct: 525 IKGYCK 530
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 180/377 (47%), Gaps = 29/377 (7%)
Query: 29 KNKHYDTVLSLFKRLNSTGLFPDLYTY--NILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
KN+ + TV S+F L G P ++L+ + K + + R F +
Sbjct: 106 KNEKH-TVSSVFHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLS 164
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
+ L+ L E++I + ++ ++ N+ T+N INGL R G
Sbjct: 165 LTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGK--------- 215
Query: 147 EMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY---ANDWNEAKCLL 203
++KA++ MK I+P+VVTY +++ G+C A +A+ +
Sbjct: 216 --------------LNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFM 261
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
EM+ + PN VTFN ++D CK+ + A + + M + G++PN YN+L++G C
Sbjct: 262 KEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNN 321
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
G++ A +L+ M +G + +Y+ LING+CK K ++ A ++ ++ + + P+V+ +
Sbjct: 322 GKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITF 381
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
NT+ + +E F L M +G+ + TY I GLC+ + A EL +
Sbjct: 382 NTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMEN 441
Query: 384 LKCELDIRAYNCLIDGL 400
+ D+ YN LIDGL
Sbjct: 442 KGLKGDVVTYNILIDGL 458
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 136/306 (44%), Gaps = 39/306 (12%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N L L N + + L+ ++ GL P++ TYN LIN FCK + V
Sbjct: 306 PNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKV 365
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + PN +TF ++I C E + E +L + + G PNV TYN LI GL R
Sbjct: 366 FDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCR 425
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ AKEL +M+++ + DVVTY +I G C +
Sbjct: 426 KQD-----------------------LQAAKELLNEMENKGLKGDVVTYNILIDGLCKND 462
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
A+ LL EM + G++PN VT+N +MD C GK+ A + M + +PN YN
Sbjct: 463 KSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYN 522
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ G+C ++ A L M G +Y I + EML K
Sbjct: 523 VLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDI----------------VRLEMLEK 566
Query: 315 GIKPDV 320
G PD+
Sbjct: 567 GFSPDI 572
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 208/433 (48%), Gaps = 47/433 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S NI+ L K + +F+ + G P+ TY LI+ K G++ + +
Sbjct: 418 PNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRL 477
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESR-------------------------------- 102
++L + N + +TSLI+ R
Sbjct: 478 FEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFK 537
Query: 103 ---IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEG 159
+ + A+F ++ FG P+V +Y+ LI+GL + G N+F+ M+
Sbjct: 538 AGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARA 597
Query: 160 F------------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
+ VDKA E+ +MK ++++P V TY S++ G + +EA L E
Sbjct: 598 YNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAK 657
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+G++ NV+ ++ ++D K G++DEA +L+ M++ G+ PN + +N+LMD T ++
Sbjct: 658 SKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEID 717
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A F SM+ M C+ ++YSILING C+ ++ A + EM +G+ P+VV Y T+
Sbjct: 718 EALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMI 777
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
L ++ + A+ LF+ + +G D+ ++ I+G+ + +EA ++F R+ C
Sbjct: 778 SGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCR 837
Query: 388 LDIRAYNCLIDGL 400
L+++ L+D L
Sbjct: 838 LNVKTCISLLDAL 850
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 203/398 (51%), Gaps = 13/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V SFN + CL K + D L+LF + P++ TYNI+I+ C GRV+ + +
Sbjct: 349 PSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAK-PNISTYNIIIDMLCMAGRVNEAYKI 407
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + PN ++ ++ LC +++ EA +F GC PN TY +LI+GL +
Sbjct: 408 RDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGK 467
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
G A LFE+M + F + G + +++ +M PD+
Sbjct: 468 KGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTL 527
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ + A + + + + +M G P+V ++++++ L K G+ E S + M
Sbjct: 528 LNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMS 587
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q G +A YN ++DG C +G+V++A E+ M+ TV +Y +++G K ++
Sbjct: 588 QQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLD 647
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ E SKGI+ +V++Y++L ++ +++ A+ + +EM + G+ + +T+ + +
Sbjct: 648 EAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLM 707
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D L K I EA+ F++++ +KC + Y+ LI+GL
Sbjct: 708 DALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGL 745
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 186/393 (47%), Gaps = 13/393 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F L LA+ + L+L + + L PD+ YN+ I+CF K G V + +
Sbjct: 214 FTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELK 273
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
P+ V++TS++ LC R+ EA LF ++ P + YNT+I G
Sbjct: 274 AHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFD 333
Query: 140 VALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSVI 187
A L E + V F VD+A LF MK ++ P++ TY +I
Sbjct: 334 DAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMK-KDAKPNISTYNIII 392
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
C A NEA + EM G+ PN+++ N+++D LCK +++EA R+ + + G
Sbjct: 393 DMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCN 452
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
PN+ Y +L+DG G+++ A LF M G Y+ LI + + E +
Sbjct: 453 PNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKI 512
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
Y EM+ +G +PD+ + NT +F+ +VE+ +F++M+ G D +Y I GL K
Sbjct: 513 YKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTK 572
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
E +F+ + LD RAYN ++DGL
Sbjct: 573 AGQARETSNIFQAMSQQGFALDARAYNAVVDGL 605
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 191/431 (44%), Gaps = 46/431 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +N+ C K D F L + GL PD +Y ++ CK GR+ +
Sbjct: 244 PDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEEL 303
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
G++ P A + ++I G + R +A L +LR GC P+V ++N+++ L +
Sbjct: 304 FGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGK 363
Query: 135 TGHTIVALNLFEEMASGNGE-----------FGVEGFVDKAKELFLQMKDENINPDVVTY 183
AL LF+ M + G V++A ++ +M+ + P++++
Sbjct: 364 KRKVDEALTLFDVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSV 423
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
++ C AN EA + ++G PN VT+ ++D L K GK+D+A RL + M+
Sbjct: 424 NIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLD 483
Query: 244 IGVRPNAFVYNTLMDGFCLTGR-----------------------------------VNR 268
G N +Y +L+ F + GR V +
Sbjct: 484 AGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEK 543
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
+ +F M+S G V SYSILI+G K + +++ M +G D YN +
Sbjct: 544 GRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVD 603
Query: 329 VLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
L + +V++A+++ +EM+ V TY + +DGL K + EA LF + EL
Sbjct: 604 GLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIEL 663
Query: 389 DIRAYNCLIDG 399
++ Y+ LIDG
Sbjct: 664 NVILYSSLIDG 674
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 172/365 (47%), Gaps = 23/365 (6%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P + N C+ K + ++F+ + S G PD+ +Y+ILI+ K G+
Sbjct: 519 RGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARE 578
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ + + F +A + +++ GLC ++ +A + +++V P V TY ++++
Sbjct: 579 TSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVD 638
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
GL + +D+A LF + K + I +V+ Y+S+I GF
Sbjct: 639 GLAKIDR-----------------------LDEAYMLFEEAKSKGIELNVILYSSLIDGF 675
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
+EA +L EMM +G+ PNV T+N +MD L K ++DEA M ++ PN
Sbjct: 676 GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNT 735
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
+ Y+ L++G C + N+A + M+ G V +Y+ +I+G K I A SL+
Sbjct: 736 YTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFER 795
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
+ G PD +N L + ++ A+++F+E + G + T + +D L K
Sbjct: 796 FKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTEC 855
Query: 371 IVEAV 375
+ +A
Sbjct: 856 LEQAA 860
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 186/434 (42%), Gaps = 50/434 (11%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P P C+ L L +++ + + + P Y +LI + +
Sbjct: 140 PNPACA--ALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALE 197
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L ++ + + FT+L++ L E ++ A AL +++ EP++ YN I+
Sbjct: 198 LLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFG 257
Query: 134 RTGHTIVALNLFEEM-ASGNGEFGVE-----------GFVDKAKELFLQMKDENINPDVV 181
+ G +A F E+ A G V G + +A+ELF QM+ E P
Sbjct: 258 KAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAY 317
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y ++I G+ A +++A LL + ++G P+VV+FN I+ L K K+DEA L D+M
Sbjct: 318 AYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM 377
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVN---------------------------------- 267
+ +PN YN ++D C+ GRVN
Sbjct: 378 -KKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQL 436
Query: 268 -RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
A +F S GC +Y LI+G K +I+ A L+ +ML G + +IY +L
Sbjct: 437 EEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSL 496
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
F + E K++ EM R G D T++D + K + + +F ++
Sbjct: 497 IRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGF 556
Query: 387 ELDIRAYNCLIDGL 400
D+R+Y+ LI GL
Sbjct: 557 LPDVRSYSILIHGL 570
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 199/386 (51%), Gaps = 26/386 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+N + L + +++D ++ R+ G+ PD+YT+ I + FC+ R +
Sbjct: 109 PSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRL 168
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + +AV + ++I G E+ +EA LF ++ G P++ +N LI+ L R
Sbjct: 169 LNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCR 228
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
GH V +++ L ++ ++P++ T I+GFC
Sbjct: 229 KGH-----------------------VQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRA 265
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
NEA L++ + +G+ P+V+T+N ++ LCKN K+ EA L M+ G P+ F YN
Sbjct: 266 MLNEA-IRLLDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYN 324
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+++DG+C G + A ++ G +Y LING C++ +I+ A++++ E + K
Sbjct: 325 SIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEK 384
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+KP++V+ NTL L + + +A KL +EM +G + D WTY I+GLCK + +A
Sbjct: 385 GLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDA 444
Query: 375 VELFRTLRILKCEL-DIRAYNCLIDG 399
L I K L D+ +N LIDG
Sbjct: 445 DNLVIDA-IAKGHLPDVFTFNTLIDG 469
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 120/397 (30%), Positives = 185/397 (46%), Gaps = 59/397 (14%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V ++N L L KN +++ + G PD +TYN +I+ +CK+G + +
Sbjct: 279 RGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQN 338
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+L F P+ T+ SLI GLC + I A +F + G +PN+ NTL+
Sbjct: 339 ADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVK 398
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
GL + G + AL L EM S NG +PD+ TY VI G
Sbjct: 399 GLSQQGLILQALKLMNEM-SENG----------------------CSPDIWTYNLVINGL 435
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C ++A L+I+ + +G P+V TFN ++D CK K+D A ++D M GV P+
Sbjct: 436 CKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDV 495
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
YN++++G C G+ F M GC + +Y+IL +CK +++E AL+L E
Sbjct: 496 ITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEE 555
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAF------------------------------ 340
M +KG+ PDVV + TL + ++ A+
Sbjct: 556 MQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKL 615
Query: 341 ------KLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
KLF++M +G + D++TYR IDG CK I
Sbjct: 616 NMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNI 652
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 200/399 (50%), Gaps = 16/399 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +FN L L + H L ++ G+ P+L+T NI I FC+ ++ +
Sbjct: 214 PDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRL 273
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + R TP+ +T+ +LI GLC +++EA K+ G EP+ FTYN++I+G +
Sbjct: 274 LDGVGRG-LTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCK 332
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G A + + A NG +G +D+A +F + ++ + P++V
Sbjct: 333 LGMMQNADQILRDGAFKGFVPDESTYCSLING-LCQDGDIDRAINVFNEAMEKGLKPNLV 391
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
++++G +A L+ EM + G P++ T+N++++ LCK G + +A L+
Sbjct: 392 LCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDA 451
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
I G P+ F +NTL+DG+C +++ A E+ M + G + V +Y+ ++NG CK +
Sbjct: 452 IAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKY 511
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E + + M+ KG P+++ YN L + +VE A L +EMQ G+ D + T
Sbjct: 512 EDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTL 571
Query: 362 IDGLCKNSYIVEAVELF-RTLRILKCELDIRAYNCLIDG 399
+ G C N + A +LF R K I YN +I+
Sbjct: 572 MKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINA 610
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 193/408 (47%), Gaps = 16/408 (3%)
Query: 7 MLNMRPSP---PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
+LN PS ++ + G + H LF+ + G+ PD+ +N LI+ C
Sbjct: 168 LLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLC 227
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ G V +L ++L+ +PN T I+G C + + EA L + G P+V
Sbjct: 228 RKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGR-GLTPDVI 286
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGE---FGVEGFVDKAKEL-FLQMKDENIN-- 177
TYNTLI GL + + A + +M + E F +D +L +Q D+ +
Sbjct: 287 TYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDG 346
Query: 178 ------PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
PD TY S+I G C D + A + E M++G++PN+V N ++ L + G +
Sbjct: 347 AFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLI 406
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
+A +L++ M + G P+ + YN +++G C G V+ A L + + G VF+++ L
Sbjct: 407 LQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTL 466
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I+GYCK +++ A+ + M + G+ PDV+ YN++ L + + E F M G
Sbjct: 467 IDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGC 526
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ TY + CK + EA+ L ++ D+ + L+ G
Sbjct: 527 VPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKG 574
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 158/326 (48%), Gaps = 15/326 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + N L L++ L L ++ G PD++TYN++IN CK+G VS +
Sbjct: 388 PNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNL 447
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + P+ TF +LI G C + ++ A + ++ G P+V TYN+++NGL +
Sbjct: 448 VIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCK 507
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G + F+ M F V++A L +M+++ + PDVV
Sbjct: 508 AGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVN 567
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+ ++++GFC D + A L + +Q + T+N++++ M+ A +L + M
Sbjct: 568 FGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKM 627
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G P+++ Y ++DGFC TG +N + G ++ ++ ++N C + +
Sbjct: 628 CENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRV 687
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLF 327
A+ + M+ KGI P+VV NT+F
Sbjct: 688 HEAVGIIHLMVHKGIVPEVV--NTIF 711
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 14/268 (5%)
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV--TYTSVIRGFCYAN 194
HT++ E +GEF +A E L NI+ ++ Y +R +
Sbjct: 38 HTLLTYKGMIEKLGFHGEF-------EAMEEVLAETRMNIDNGLLEGVYIGAMRNYGRKG 90
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EA + M +P+V ++N IM+ L + D+A ++ M G+ P+ + +
Sbjct: 91 KIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFT 150
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING-YCKNKEIEGALSLYGEMLS 313
M FC T R + A+ L +M S GC + +Y +I G Y +N +E A L+ EML
Sbjct: 151 IRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVE-AHELFEEMLG 209
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
GI PD++ +N L L V+ + +L +++ + GV+ + +T FI G C+ + + E
Sbjct: 210 LGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNE 269
Query: 374 AVELFRTL-RILKCELDIRAYNCLIDGL 400
A+ L + R L D+ YN LI GL
Sbjct: 270 AIRLLDGVGRGLTP--DVITYNTLICGL 295
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 200/410 (48%), Gaps = 12/410 (2%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ P V + + L L K +H+ + LF + S G+ PD+Y Y +I
Sbjct: 178 VFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSL 237
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C++ +S ++ + + N V + LI GLC + ++ EA + L +P+V
Sbjct: 238 CELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDV 297
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEM-------ASGNGEFGVEGF-----VDKAKELFLQ 170
TY TL+ GL + + L + +EM + VEG +++A L +
Sbjct: 298 VTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKR 357
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ D ++P++ Y ++I C ++EA+ L M G++PN VT+++++D C+ GK
Sbjct: 358 VVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGK 417
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+D A L M+ G++ + + YN+L++G C G ++ A+ M + TV +Y+
Sbjct: 418 LDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTS 477
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L+ GYC +I AL LY EM KGI P + + TL LF + A KLF+EM
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN 537
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
V + TY I+G C+ + +A E + + D +Y LI GL
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 191/396 (48%), Gaps = 24/396 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M + P V +++IL + DT LS + TGL +Y YN LIN
Sbjct: 389 LFDRMGKIGLRPNDV-TYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGH 447
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G +S + ++ P VT+TSL+ G C++ +I +A L+ ++ G P++
Sbjct: 448 CKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSI 507
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+T+ TL++GL+R G A+ LF EMA + N+ P+ VT
Sbjct: 508 YTFTTLLSGLFRAGLIRDAVKLFNEMA-----------------------EWNVKPNRVT 544
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I G+C D ++A L EM ++G+ P+ ++ ++ LC G+ EA +D +
Sbjct: 545 YNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH 604
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ N Y L+ GFC G++ A + M G + Y +LI+G K+K+ +
Sbjct: 605 KGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRK 664
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
L EM +G+KPD VIY ++ + + AF ++D M +G + TY I
Sbjct: 665 LFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
+GLCK ++ EA L ++ + + Y C +D
Sbjct: 725 NGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD 760
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 191/415 (46%), Gaps = 31/415 (7%)
Query: 16 PVCSFNILFGCLAKNK------------HY-------DTVLSLFKRLNSTGLFPDLYTYN 56
P FN+LF C K K HY D VL + L P++ T +
Sbjct: 137 PSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLS 196
Query: 57 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF 116
L++ K + ++ P+ +T +I+ LC + A + +
Sbjct: 197 ALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEAT 256
Query: 117 GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVD--------KAKELF 168
GC+ N+ YN LI+GL + A+ + +++A + + V + + E+
Sbjct: 257 GCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIG 316
Query: 169 LQMKDE----NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
L+M DE +P +S++ G EA L+ ++D GV PN+ +N ++D
Sbjct: 317 LEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDS 376
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
LCK K EA L D M +IG+RPN Y+ L+D FC G+++ A M G +
Sbjct: 377 LCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLS 436
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
V+ Y+ LING+CK +I A EM++K ++P VV Y +L ++ +A +L+
Sbjct: 437 VYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH 496
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
EM G+A +T+ T + GL + I +AV+LF + + + YN +I+G
Sbjct: 497 EMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEG 551
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 179/399 (44%), Gaps = 20/399 (5%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ +N+L L K + + + K L L PD+ TY L+ CK+ G ++
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMD 321
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+L F+P+ +SL++GL +I EA L ++ FG PN+F YN LI+ L +
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381
Query: 137 HTIVALNLFEEMASGNGEFGVE----------------GFVDKAKELFLQMKDENINPDV 180
A LF+ M G+ G+ G +D A +M D + V
Sbjct: 382 KFHEAELLFDRM----GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSV 437
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
Y S+I G C D + A+ + EM+++ ++P VVT+ +M C GK+++A RL
Sbjct: 438 YPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE 497
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M G+ P+ + + TL+ G G + A +LF M +Y+++I GYC+ +
Sbjct: 498 MTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGD 557
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ A EM KGI PD Y L L Q A D + + + Y
Sbjct: 558 MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ G C+ + EA+ + + + +LD+ Y LIDG
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 170/376 (45%), Gaps = 14/376 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +F L L + + LF + + P+ TYN++I +C+ G +S F
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P+ ++ LI GLC + EA L CE N Y L++G R
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 135 TGHTIVALNLFEEMASGNGE-----FGV---EGFVDKAKELFL----QMKDENINPDVVT 182
G AL++ +EM + +GV K ++LF +M D + PD V
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVI 684
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YTS+I D+ EA + M+++G PN VT+ +++ LCK G ++EA L M
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM-GCTHTVFSYSILINGYCKNKEI 301
+ PN Y +D G V+ K + + + G +Y++LI G+C+ I
Sbjct: 745 PVSSVPNQVTYGCFLD-ILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRI 803
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A L M+ G+ PD + Y T+ L + V++A +L++ M G+ D Y T
Sbjct: 804 EEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTL 863
Query: 362 IDGLCKNSYIVEAVEL 377
I G C + +A EL
Sbjct: 864 IHGCCVAGEMGKATEL 879
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSK-GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+ +LI Y +++ + + ++ M++K + P+V + L L + A +LF++M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G+ D + Y I LC+ + A E+ + C+++I YN LIDGL
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGL 272
>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
Length = 447
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 193/383 (50%), Gaps = 24/383 (6%)
Query: 31 KHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTF 90
+ +D L LFK + + P+ +TYN+LI FCK G++ V + S PNA T
Sbjct: 4 RKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTM 63
Query: 91 TSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS 150
+L+ GLC ++ A LF +++ P ++N L+ G + G A+ F+EM +
Sbjct: 64 NTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKA 120
Query: 151 GNGEFGVE------------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
E +E G + +A LF M +PD++TY ++ G+C E
Sbjct: 121 SGVEPDLESYHILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYE 177
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A+ L+ E++ G +PNV T+++I++ CK K++EA + MI+ PNA +NTL+
Sbjct: 178 AQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIA 237
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK-EIEGALSLYGEMLSKGIK 317
GFC G + A +LF ME +GC T+ +Y+ LI+ CK + + A+ L+ ++ G+
Sbjct: 238 GFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLT 297
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
P +V YN+L E + +L M +G D TY I GLC + + +A L
Sbjct: 298 PTIVTYNSLIQGFSE--RANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRL 355
Query: 378 FRTLRILKCELDIRAYNCLIDGL 400
F + C ++ +N LI GL
Sbjct: 356 FNG---MACAPNVTTFNFLIRGL 375
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 150/297 (50%), Gaps = 20/297 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N+L K SL K + G P+++TY+I+INC+CK+ +V + V
Sbjct: 157 PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEV 216
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL-Y 133
+++ S PNAVTF +LI G C + +A LF ++ GC+ + TYNTLI+ L
Sbjct: 217 FMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCK 276
Query: 134 RTGHTIVALNLFEEMASGNG--------EFGVEGFVDKAKE---LFLQMKDENINPDVVT 182
+ G A++LF ++ G G ++GF ++A + L M E PDV+T
Sbjct: 277 KRGGVYTAVDLFNKL-EGAGLTPTIVTYNSLIQGFSERANDGLRLLCHMHAEGCKPDVIT 335
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I G C AN +A+ L M PNV TFN ++ LC K++EA +LD M
Sbjct: 336 YNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILDRM- 391
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
P+ +NT++ FC G ++ A+E+ M G ++ L +G +K
Sbjct: 392 ---TAPDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGIQSSK 445
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 183/429 (42%), Gaps = 88/429 (20%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS----- 69
P ++N+L K +S+F + S+GL P+ T N L+ C++G++S
Sbjct: 23 PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 82
Query: 70 --------------------HGFVVLGRILR-------SCFTPNAVTFTSLIKGLCAESR 102
GF + GR + S P+ ++ L+ L R
Sbjct: 83 FREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMKASGVEPDLESYHILLSALSDSGR 142
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF-- 160
+ EA ALF+ + C P++ TYN L++G + G T A +L +E+ E V +
Sbjct: 143 MAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSI 199
Query: 161 ----------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG 210
V++A E+F++M + N P+ VT+ ++I GFC A +A L EM G
Sbjct: 200 IINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIG 259
Query: 211 VQPNVVTFNVIMDELCK----------------------------------NGKMDEASR 236
+ +VT+N ++D LCK + + ++ R
Sbjct: 260 CKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERANDGLR 319
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
LL M G +P+ YN L+ G C RV A+ LF M C V +++ LI G C
Sbjct: 320 LLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLF---NGMACAPNVTTFNFLIRGLC 376
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K++E A ++ M + PD+ +NT+ + + + A ++ +M + G +T+
Sbjct: 377 AQKKVEEARNILDRMTA----PDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTY 432
Query: 357 TYRTFIDGL 365
T G+
Sbjct: 433 TTYALAHGI 441
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 6/206 (2%)
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
A ++A L E++ PN T+NV++ CK G+M +A + M G+ PNA
Sbjct: 3 ARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAST 62
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
NTL+ G C G+++ A +LF M++ T S++IL+ G+ A+ + EM
Sbjct: 63 MNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMK 119
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
+ G++PD+ Y+ L L + ++ A LF M + D TY +DG CK
Sbjct: 120 ASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTY 176
Query: 373 EAVELFRTLRILKCELDIRAYNCLID 398
EA L + + E ++ Y+ +I+
Sbjct: 177 EAQSLMKEILKAGYEPNVFTYSIIIN 202
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 114/385 (29%), Positives = 194/385 (50%), Gaps = 24/385 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FN L L ++ ++D +F L S + D Y++ I+I C+ G GF +
Sbjct: 122 PLSNTFNNLLCLLIRSNYFDKAWWIFNELKSKVVL-DAYSFGIMIKGCCEAGYFVKGFRL 180
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + +PN V +T+LI G C + +M A LF K+ G PN TY+ L+NG ++
Sbjct: 181 LAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFK 240
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G EGF +++ MK I P+ Y +I +C
Sbjct: 241 QG------------------LQREGF-----QMYENMKRSGIVPNAYAYNCLISEYCNDG 277
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
++A + EM ++G+ V+T+N+++ LC+ K EA +L+ + ++G+ PN YN
Sbjct: 278 MVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYN 337
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L++GFC +++ A LF ++S G + T+ +Y+ LI GY K + + GAL L EM +
Sbjct: 338 ILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEER 397
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
I P V Y L ++ E+A ++ M++ G+ D +TY + GLC + + EA
Sbjct: 398 CIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEA 457
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+LF++L + + + YN +I G
Sbjct: 458 SKLFKSLGEMHLQPNSVIYNTMIHG 482
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 174/361 (48%), Gaps = 17/361 (4%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
SP V ++ GC K+ + +LF ++N GL P+ +TY++L+N F K G GF
Sbjct: 190 SPNVVIYTTLIDGC-CKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGF 248
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+ + RS PNA + LI C + + +A +F ++R G V TYN LI GL
Sbjct: 249 QMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGL 308
Query: 133 YRTG---------HTIVALNLFEEMASGNGEFGVEGF-----VDKAKELFLQMKDENINP 178
R H + + L + + N + GF +D A LF Q+K ++P
Sbjct: 309 CRGKKFGEAVKLVHKVNKVGLSPNIVTYN--ILINGFCDVRKMDSAVRLFNQLKSSGLSP 366
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
+VTY ++I G+ + A L+ EM ++ + P+ VT+ +++D + ++A +
Sbjct: 367 TLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMH 426
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
LM + G+ P+ + Y+ L+ G C+ G + A +LF S+ M Y+ +I+GYCK
Sbjct: 427 SLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKE 486
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
AL L EM+ G+ P+V + + +L + + A L +M G+ Y
Sbjct: 487 GSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546
Query: 359 R 359
+
Sbjct: 547 K 547
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 162/336 (48%), Gaps = 19/336 (5%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
L + P+P ++++L K +++ + +G+ P+ Y YN LI+ +C G
Sbjct: 222 LGLVPNPH---TYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGM 278
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V F V + +T+ LI GLC + EA L K+ G PN+ TYN
Sbjct: 279 VDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNI 338
Query: 128 LINGLYRTGHTIVALNLFEEMASGN-------------GEFGVEGFVDKAKELFLQMKDE 174
LING A+ LF ++ S G VE A +L +M++
Sbjct: 339 LINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAG-ALDLVKEMEER 397
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDE 233
I P VTYT +I F N E C + +M++ G+ P+V T++V++ LC +G M E
Sbjct: 398 CIAPSKVTYTILIDAFARLNH-TEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKE 456
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
AS+L + ++ ++PN+ +YNT++ G+C G RA L M G V S+ I
Sbjct: 457 ASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIG 516
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
C++++ + A L G+M++ G+KP V +Y + V
Sbjct: 517 LLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHKV 552
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 162/367 (44%), Gaps = 24/367 (6%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
D L+ + G P T+N L+ + + + L+S +A +F +
Sbjct: 106 DQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNE-LKSKVVLDAYSFGIM 164
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG 153
IKG C ++ L L FG PNV Y TLI+G + G+ ++A
Sbjct: 165 IKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLA------------ 212
Query: 154 EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
K LF +M + P+ TY+ ++ GF E + M G+ P
Sbjct: 213 -----------KNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVP 261
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
N +N ++ E C +G +D+A ++ M + G+ YN L+ G C + A +L
Sbjct: 262 NAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLV 321
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
+ +G + + +Y+ILING+C ++++ A+ L+ ++ S G+ P +V YNTL ++
Sbjct: 322 HKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKV 381
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
+ A L EM+ +A TY ID + ++ +A E+ + D+ Y
Sbjct: 382 ENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTY 441
Query: 394 NCLIDGL 400
+ L+ GL
Sbjct: 442 SVLLHGL 448
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/404 (30%), Positives = 197/404 (48%), Gaps = 18/404 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P ++N++ L K + + K + + + PDL TY+ +IN FCK G +
Sbjct: 7 PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66
Query: 74 VLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+L ++ R P+ VT+TS++ GLC + ++ A + ++++ G EP+ FT++ LI G
Sbjct: 67 ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 126
Query: 133 YRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMK---DENIN 177
AL L++E+ + + E + +A ELF +M+ D
Sbjct: 127 CNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWK 186
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
PDVVTYT++I GFC + + +A +L M + PNVVT++ ++ LCK G +D+A L
Sbjct: 187 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 246
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
M G PN Y TL+ G C +V+ A+ L M + C SY+ L++GYC+
Sbjct: 247 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCR 306
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ-RDGVAADTW 356
IE A L+ EM +K PD + Y L ++E A L + M+ G+ D
Sbjct: 307 LGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVV 366
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY + G + VEA E + + + Y+ LIDGL
Sbjct: 367 TYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGL 410
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 206/427 (48%), Gaps = 57/427 (13%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFK-------RLNS-------TGL----- 48
+ ++ P +F+ L + D L L+K RL++ TGL
Sbjct: 107 MKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERR 166
Query: 49 -------------------FPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVT 89
PD+ TY LI+ FCK G + +LG + PN VT
Sbjct: 167 IGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVT 226
Query: 90 FTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
++SL+ GLC + +A LF ++ GC PNV TY TLI+GL A L +EM
Sbjct: 227 YSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMT 286
Query: 150 SG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+ +G + G +++AK+LF +M ++ PD +TYT ++RGFC A+
Sbjct: 287 ATCCPADTVSYNALLDG-YCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRL 345
Query: 197 NEAKCLLIEM-MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
EA+ LL M G+ P+VVT+++++ + + EA+ + MI V PNA Y++
Sbjct: 346 EEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSS 405
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L+DG C GRVN A E+ +++ V +Y+I+I G C E AL+L EM++K
Sbjct: 406 LIDGLCKAGRVNHAMEVLKNVDK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKR 461
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
++P V +N++ L + ++ A+KL M G+ TY T ++G + + A
Sbjct: 462 VEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAY 521
Query: 376 ELFRTLR 382
ELF +R
Sbjct: 522 ELFEVMR 528
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 191/402 (47%), Gaps = 31/402 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
I M+ P V ++ + L ++ D + + + G+ PD +T++ LI +
Sbjct: 67 ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 126
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF---GCE 119
C +V + IL S +AV+ ++LI GLC E RI EA LF ++ + +
Sbjct: 127 CNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWK 186
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPD 179
P+V TY LI+G ++G+ ++KA ++ M+ P+
Sbjct: 187 PDVVTYTALIDGFCKSGN-----------------------LEKAMKMLGVMEGRKCVPN 223
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
VVTY+S++ G C A D ++A L M +G PNVVT+ ++ LC K+D A L+D
Sbjct: 224 VVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMD 283
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M + YN L+DG+C GR+ AK+LF M + C +Y+ L+ G+C
Sbjct: 284 EMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNAS 343
Query: 300 EIEGALSLYGEM-LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+E A L M + GI PDVV Y+ + + A + EM VA + TY
Sbjct: 344 RLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTY 403
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ IDGLCK + A+E+ + + + D+ Y +I+GL
Sbjct: 404 SSLIDGLCKAGRVNHAMEVLKNVD----KPDVVTYTIVIEGL 441
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 183/398 (45%), Gaps = 63/398 (15%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS- 69
R P V +++ L L K D L LF+R+ S G P++ TY LI+ C +V
Sbjct: 218 RKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDA 277
Query: 70 ------------------------HGFVVLGRI-----------LRSCFTPNAVTFTSLI 94
G+ LGRI +SC P+ +T+T L+
Sbjct: 278 ARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCL-PDRITYTCLV 336
Query: 95 KGLCAESRIMEAAALFTKLR-VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG 153
+G C SR+ EA L ++ G +P+V TY+ ++ G R + A +EM + N
Sbjct: 337 RGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNV 396
Query: 154 EFGV------------EGFVDKAKELFLQMKDENIN-PDVVTYTSVIRGFCYANDWNEAK 200
G V+ A E+ +N++ PDVVTYT VI G C + EA
Sbjct: 397 APNAVTYSSLIDGLCKAGRVNHAMEVL-----KNVDKPDVVTYTIVIEGLCGTDRTEEAL 451
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
LL EM+++ V+P+V TFN ++ LC+ G MDEA +LL M G+ P Y TL++GF
Sbjct: 452 TLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGF 511
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVF-------SYSILINGYCKNKEIEGALSLYGEMLS 313
TGR+ A ELF M + ++S LI G CK +EI+ A+++ E+ S
Sbjct: 512 SRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRS 571
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
+ +P + L + E A KL + + + G+
Sbjct: 572 RECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 130/232 (56%), Gaps = 5/232 (2%)
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD-QGVQPNVVTFNVIMDELCKNGKMD 232
E + P+ TY V+ G C A ++A +L EM D + V P++VT++ +++ CK G+MD
Sbjct: 3 EFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMD 62
Query: 233 EASRLLDLMI-QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
A +L M+ + G+ P+ Y +++DG C G+++RA E+ M+ G F++S L
Sbjct: 63 RACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSAL 122
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ--RD 349
I G+C ++++ AL LY E+L+ + D V + L L ++ A++LF EM+ D
Sbjct: 123 ITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMRED 182
Query: 350 GV-AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G D TY IDG CK+ + +A+++ + KC ++ Y+ L+ GL
Sbjct: 183 GAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGL 234
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 198/435 (45%), Gaps = 49/435 (11%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP ++N + L K + L + + GLFP+ T+NIL+ C++G +
Sbjct: 229 PPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAAN 288
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
V+ + ++ P+A T+ +I G C + RI EA L ++ P+V TYNTLING +
Sbjct: 289 VIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCF 348
Query: 134 RTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDV 180
G + L EEM G G F +G +D+ + +M++ PD+
Sbjct: 349 EHGSSEEGFKLIEEM-EGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDI 407
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS----- 235
VTY ++I C +EA L+ EM +G++ + VT N ++ LC+ K+DEA
Sbjct: 408 VTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCS 467
Query: 236 ------------------------------RLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
RL D M + + P+ YN+++ G C G+
Sbjct: 468 ARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGK 527
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
N+A + + G +Y+ +I+GYC+ ++E A + +M+ K KPDVV NT
Sbjct: 528 TNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNT 587
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L L + +E+A KLF+ G D +Y T I LCK EA +L + K
Sbjct: 588 LLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKK 647
Query: 386 CELDIRAYNCLIDGL 400
D YN ++ GL
Sbjct: 648 LGPDCYTYNAILGGL 662
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 185/384 (48%), Gaps = 27/384 (7%)
Query: 38 SLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTP--------NAVT 89
+F R+ G+ P L T N L+N + SH R+ ++ FT N +
Sbjct: 145 QIFNRMKRLGMQPTLLTCNTLLNALVRFPS-SHSI----RLSKAVFTDFIKIGVKINTNS 199
Query: 90 FTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
F LI G C E+R EA + K+R +GC P+ TYNT+++GL + G A +L +M
Sbjct: 200 FNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMK 259
Query: 150 SGNGEFGVE-------------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+ G F G++ +A + M ++ PD TY +I GFC
Sbjct: 260 N-KGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRI 318
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
EA L EM + + P+VVT+N +++ ++G +E +L++ M G++PN+ YN +
Sbjct: 319 AEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVM 378
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ F G+++ + ME GC + +Y+ LI+ +CK +++ A L EM KG+
Sbjct: 379 VKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGL 438
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
K D V NT+ L +++ A L +R G D +Y T I G K+ +A+
Sbjct: 439 KMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALR 498
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
L+ ++ + I YN +I GL
Sbjct: 499 LWDEMKEKEIIPSIITYNSMIAGL 522
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 173/372 (46%), Gaps = 56/372 (15%)
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR--TGHT 138
SC + I A R +AA +F +++ G +P + T NTL+N L R + H+
Sbjct: 118 SCLHISKPLLDISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHS 177
Query: 139 I----------------VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
I + N F + G+ +E +A + +M+D PD +T
Sbjct: 178 IRLSKAVFTDFIKIGVKINTNSFNILIHGSC---MENRFGEAIRVLGKMRDYGCPPDNIT 234
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++ G C NEA+ LL++M ++G+ PN TFN+++ C+ G + EA+ +++LM
Sbjct: 235 YNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMS 294
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q V P+A+ YN ++ GFC GR+ A L ME++ + V +Y+ LING ++ E
Sbjct: 295 QNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSE 354
Query: 303 GALSLYGEMLSKGIK-----------------------------------PDVVIYNTLF 327
L EM +G+K PD+V YNTL
Sbjct: 355 EGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLI 414
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
++ +++ AF+L DEM R G+ D T T + LC+ + EA +L + R
Sbjct: 415 SWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYF 474
Query: 388 LDIRAYNCLIDG 399
+D +Y LI G
Sbjct: 475 VDEVSYGTLIIG 486
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 164/346 (47%), Gaps = 23/346 (6%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P ++N++ K D V +++ +G PD+ TYN LI+ CK+G++
Sbjct: 366 RGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDE 425
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
F ++ + R + VT ++++ LC E ++ EA L R G + +Y TLI
Sbjct: 426 AFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLII 485
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
G ++ AL L++EM K++ I P ++TY S+I G
Sbjct: 486 GYFKHEKASQALRLWDEM-----------------------KEKEIIPSIITYNSMIAGL 522
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C N+A L E+++ G+ P+ +T+N I+ C+ G++++A + + M++ +P+
Sbjct: 523 CQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDV 582
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
NTL+ G C G + +A +LF + S G SY+ +I CK K A L E
Sbjct: 583 VTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEE 642
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
M K + PD YN + L + +++ A + ++ G + + +
Sbjct: 643 MEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQF 688
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 23/224 (10%)
Query: 29 KNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 88
K++ L L+ + + P + TYN +I C+MG+ + L +L S P+ +
Sbjct: 489 KHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEI 548
Query: 89 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM 148
T+ ++I G C E ++ +A K+ +P+V T NTL+ GL +
Sbjct: 549 TYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCK-------------- 594
Query: 149 ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD 208
EG ++KA +LF + + D V+Y ++I C + EA LL EM +
Sbjct: 595 ---------EGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEE 645
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
+ + P+ T+N I+ L G+M +A + + + G N F+
Sbjct: 646 KKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQFL 689
>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
Group]
gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
Length = 618
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/374 (30%), Positives = 196/374 (52%), Gaps = 12/374 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + N + L K V LF + G+ P + TYN LIN G V+ + V
Sbjct: 136 PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEV 195
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ PN VT+T++I LC E I +A LF +++ G PN++TYN L++ ++
Sbjct: 196 WDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFK 255
Query: 135 TGHTIVALNLFEEM-----ASGNGEFG--VEGF-----VDKAKELFLQMKDENINPDVVT 182
+ AL + ++ + F ++G + +AK +FL M + P V
Sbjct: 256 RDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPV 315
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S+I G + EA E++ +G++P+ T ++++ LC G+M A+R L++M
Sbjct: 316 YNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQ 375
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q G+ NA YN L+D +C +G ++ A M +G V +YS LI+G+ KN E+E
Sbjct: 376 QSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEME 435
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+++Y EM++KG++P+VV Y L + ++ AF L EM+ G+ ++ T +
Sbjct: 436 IAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLV 495
Query: 363 DGLCKNSYIVEAVE 376
DGLC+ + + +AV
Sbjct: 496 DGLCRENRVQDAVR 509
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 186/404 (46%), Gaps = 30/404 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
++D M+ R P V ++ + L + LF + G+ P+LYTYN L++
Sbjct: 195 VWDQMVARRIDPN-VVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSH 253
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K + H V +L+ PN V FT+LI GLC +RI EA +F + + P V
Sbjct: 254 FKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTV 313
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
YN+LI+G +R+G+ AL F+E+ + + PD T
Sbjct: 314 PVYNSLIHGAFRSGYAQEALAFFQEIIR-----------------------KGLRPDEFT 350
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ V+RG C A L M G+ N +NV++DE CK+G +DEA M
Sbjct: 351 CSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMS 410
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
++GV PN Y++L+DG G + A ++ M + G V +Y+ LI+G+ KN +++
Sbjct: 411 EVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMD 470
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE------MQRDGVAADTW 356
A L EM KGI + + + L L ++V+ A + E +++ A++
Sbjct: 471 AAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSV 530
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY T I GL + EA F +R D Y +I GL
Sbjct: 531 TYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGL 574
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 162/343 (47%), Gaps = 26/343 (7%)
Query: 57 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF 116
+L+ +M V GR+ P +++ GL + LF ++
Sbjct: 111 VLVIALSQMALPDEALSVFGRLRE---LPALPACNAILDGLVKAHMLARVWELFDEMLGR 167
Query: 117 GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI 176
G P+V TYNTLIN +G V KA E++ QM I
Sbjct: 168 GMVPSVVTYNTLINACRH-----------------------QGDVAKAWEVWDQMVARRI 204
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
+P+VVTYT++I C + +A+ L +EM + G++PN+ T+N +M K + A
Sbjct: 205 DPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALV 264
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+++ G+ PN ++ TL+DG C R+ AK +F+ M TV Y+ LI+G
Sbjct: 265 FYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAF 324
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
++ + AL+ + E++ KG++PD + + L + Q++ A + + MQ+ G+A +
Sbjct: 325 RSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAA 384
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
Y ID CK+ + EA+ + + E ++ Y+ LIDG
Sbjct: 385 AYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDG 427
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/413 (30%), Positives = 191/413 (46%), Gaps = 47/413 (11%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
D VL + + S G+ +L TYN+LI+ CK G++ +L ++ PN+ TF L
Sbjct: 261 DEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLL 320
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA-SGN 152
I+G C E + A L ++ P+ +Y +INGL +A L E+M SG
Sbjct: 321 IEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGL 380
Query: 153 GE-----------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
+ EG +++A+ L M + PD+ Y ++I A EA
Sbjct: 381 KPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 440
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG-- 259
L+E+ +G++P+ VTF + K GKM EA++ D M+ G+ PN +Y L++G
Sbjct: 441 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 500
Query: 260 ---------------------------------FCLTGRVNRAKELFVSMESMGCTHTVF 286
GRV A ++F ++ G VF
Sbjct: 501 KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 560
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+YS LI+G+CK E+E A L+ EM KGI P++ IYN L L + ++RA KLFD M
Sbjct: 561 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 620
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G+ D+ TY T IDG CK+ + EA LF + + YN L+ G
Sbjct: 621 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG 673
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/398 (29%), Positives = 189/398 (47%), Gaps = 15/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F +L + + L L + L P +Y +IN C +S +
Sbjct: 312 PNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKL 371
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ S PN V +++LI G +E RI EA L + G P++F YN +I+ L +
Sbjct: 372 LEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSK 431
Query: 135 TGHTIVALNLFEEMASGNG------EFGV-------EGFVDKAKELFLQMKDENINPDVV 181
G A E+ G G FG G + +A + F +M D + P+
Sbjct: 432 AGKMEEASTYLLEI-QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 490
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
YT +I G A + EA + + GV P+V T + + L KNG++ EA ++ +
Sbjct: 491 LYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 550
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G+ P+ F Y++L+ GFC G V +A EL M G +F Y+ L++G CK+ +I
Sbjct: 551 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 610
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A L+ M KG++PD V Y+T+ + V AF LF EM GV ++ Y
Sbjct: 611 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 670
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ G CK + +A+ LFR + + K ++N LIDG
Sbjct: 671 VHGCCKEGDMEKAMNLFREM-LQKGFATTLSFNTLIDG 707
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 195/408 (47%), Gaps = 18/408 (4%)
Query: 4 FDYMLN--MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
FD ML+ + P+ P + +L K + LS+F+ L++ G+ PD+ T + I+
Sbjct: 477 FDEMLDHGLMPNNP---LYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHG 533
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
K GRV V + P+ T++SLI G C + + +A L ++ + G PN
Sbjct: 534 LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPN 593
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG-------VEGF-----VDKAKELFL 169
+F YN L++GL ++G A LF+ M E ++G+ V +A LF
Sbjct: 594 IFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFH 653
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M + + P Y +++ G C D +A L EM+ +G ++FN ++D CK+
Sbjct: 654 EMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSC 712
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+ EAS+L MI + P+ Y T++D C G++ A LF M+ +Y+
Sbjct: 713 KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYT 772
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
L+ GY K + +L+ +M++KG+KPD V Y + + + AFKL DE+
Sbjct: 773 SLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGK 832
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
G+ + I LCK + EA +L + L + + A + L+
Sbjct: 833 GMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLV 880
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 196/399 (49%), Gaps = 14/399 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ I+ L + K + F+ + TGL PD + LI+ F + G + +
Sbjct: 207 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDE-VLR 265
Query: 75 LGRILRSCFTP-NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ ++ SC P N +T+ LI GLC ++ +AA + + GC+PN T+ LI G
Sbjct: 266 IKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYC 325
Query: 134 RTGHTIVALNLFEEMASGN-----GEFG--VEGF-----VDKAKELFLQMKDENINPDVV 181
R + AL L +EM N +G + G + A +L +M + P+VV
Sbjct: 326 REHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVV 385
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y+++I G+ EA+ LL M GV P++ +N I+ L K GKM+EAS L +
Sbjct: 386 VYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 445
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
G++P+A + + G+ TG++ A + F M G Y++LING+ K +
Sbjct: 446 QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNL 505
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
ALS++ + + G+ PDV + L + +V+ A K+F E++ G+ D +TY +
Sbjct: 506 MEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL 565
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I G CK + +A EL + + +I YN L+DGL
Sbjct: 566 ISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 604
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 181/397 (45%), Gaps = 13/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + + L KN L +F L GL PD++TY+ LI+ FCK G V F +
Sbjct: 522 PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFEL 581
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ PN + +L+ GLC I A LF + G EP+ TY+T+I+G +
Sbjct: 582 HDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCK 641
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
+ + A +LF EM S + EG ++KA LF +M + ++
Sbjct: 642 SENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLS 700
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ ++I G+C + EA L EM+ + + P+ VT+ ++D CK GKM+EA+ L M
Sbjct: 701 FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQ 760
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ + + Y +LM G+ G+ + LF M + G +Y ++I +CK +
Sbjct: 761 ERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLV 820
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L E++ KG+ I++ L L + + A KL DEM G+ T +
Sbjct: 821 EAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLV 880
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + EA +F ++ L D L++G
Sbjct: 881 RSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 917
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 186/397 (46%), Gaps = 23/397 (5%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNS------TGLFPDLYTYNILINCFCKMGRVSHGFVV 74
N+ F +AKN D++L R NS GL P+ YTY I+ C+ R++ +
Sbjct: 177 NVFF--VAKN---DSILISLIRCNSLRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLT 231
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ ++ P+ ++LI G E I E + + G N+ TYN LI+GL +
Sbjct: 232 FEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCK 291
Query: 135 TGHTIVALNLFEEMASGNGE-------FGVEGF-----VDKAKELFLQMKDENINPDVVT 182
G A + + M + + +EG+ + +A EL +M+ N+ P V+
Sbjct: 292 FGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVS 351
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G C+ D + A LL +M G++PNVV ++ ++ G+++EA RLLD M
Sbjct: 352 YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMS 411
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
GV P+ F YN ++ G++ A + ++ G ++ I GY K ++
Sbjct: 412 CSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMT 471
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A + EML G+ P+ +Y L F+ + A +F + GV D T FI
Sbjct: 472 EAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFI 531
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
GL KN + EA+++F L+ D+ Y+ LI G
Sbjct: 532 HGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISG 568
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 177/380 (46%), Gaps = 15/380 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ L K + L + G+ P+++ YN L++ CK G + +
Sbjct: 557 PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKL 616
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ P++VT++++I G C + EA +LF ++ G +P+ F YN L++G +
Sbjct: 617 FDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCK 676
Query: 135 TGHTIVALNLFEEMASGNGEFG--------VEGF-----VDKAKELFLQMKDENINPDVV 181
G A+NLF EM F ++G+ + +A +LF +M + I PD V
Sbjct: 677 EGDMEKAMNLFREMLQKG--FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHV 734
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT+VI C A EA L EM ++ + + VT+ +M K G+ E L + M
Sbjct: 735 TYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKM 794
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ GV+P+ Y ++ C + A +L + G + +LI CK +++
Sbjct: 795 VAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDL 854
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A L EM G+KP + +TL E +++ A ++F+ ++ G+ DT T
Sbjct: 855 TEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDL 914
Query: 362 IDGLCKNSYIVEAVELFRTL 381
++G ++ +A L + L
Sbjct: 915 VNGNLNDTDSEDARNLIKQL 934
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 138/317 (43%), Gaps = 26/317 (8%)
Query: 90 FTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
T +I+ + S I+++ LF G P VF + LI+ R G A N+F
Sbjct: 127 LTQMIRTPYSSSSILDSV-LFWFRNYGGSSPVVF--DILIDSYKRMGMLDEAANVF---- 179
Query: 150 SGNGEFGVEGFVDKAKELFLQ---------MKDENINPDVVTYTSVIRGFCYANDWNEAK 200
FV K + + M ++ + P+ TYT + G C A NEAK
Sbjct: 180 ----------FVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAK 229
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
EM G++P+ + ++D + G +DE R+ D+M+ G+ N YN L+ G
Sbjct: 230 LTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGL 289
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
C G++ +A E+ M ++GC ++ +LI GYC+ + AL L EM + + P
Sbjct: 290 CKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSA 349
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
V Y + L + A KL ++M G+ + Y T I G I EA L
Sbjct: 350 VSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDG 409
Query: 381 LRILKCELDIRAYNCLI 397
+ DI YN +I
Sbjct: 410 MSCSGVAPDIFCYNAII 426
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 124/404 (30%), Positives = 203/404 (50%), Gaps = 21/404 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V FN L L K+ + D + LF+ + S+ + PD++TYN +I+ CK G + +
Sbjct: 95 PDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKAREL 154
Query: 75 LGRILRSC--FTPNAVTFTSLIK-GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
L ++R P+ VT+ +LI G+C + + EA + +++ G P+V TYN++I+
Sbjct: 155 LEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHA 214
Query: 132 LYRTGHTIVALNLFEEMASGNG---------EFGVEGFVDKAKELFLQMKDENINPDVVT 182
L G + A + + M+ F G + +A E+ +M ENI PDV+T
Sbjct: 215 LCVAGRVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVIT 274
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL----- 237
YT ++ G C A LL E++ QG P+V+ + ++D LCK+G+++EA +L
Sbjct: 275 YTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMS 334
Query: 238 ----LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
L M+ I + P F YN ++ G G +++A L + + G V +Y+ LI+
Sbjct: 335 AREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLID 394
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
G CK + A L EM S G P+ V ++ L + +V+ A+ L EM R A
Sbjct: 395 GLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAP 454
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ Y + IDGLCK+ + +A + +R LD AY LI
Sbjct: 455 NVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLI 498
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 179/338 (52%), Gaps = 29/338 (8%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G D+++YN L++ K G V +L S +PN VTF LI+G C + A
Sbjct: 22 GYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRA 81
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKE 166
L F P+V+ +N LI+GL++ G+ D+A +
Sbjct: 82 LEFLRALDEFSVAPDVYIFNFLIHGLFKDGNP-----------------------DQAVK 118
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ--PNVVTFNVIMDE 224
LF M+ +NPD+ TY +VI G C + + +A+ LL EM+ +G + P++VT+N +++
Sbjct: 119 LFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINA 178
Query: 225 -LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
+CK+G ++EA +LD M G P+ YN+++ C+ GRV A E+ +++M C+
Sbjct: 179 GICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEI---LKTMSCSP 235
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
+ +++ L++G+CK + AL + EM + I PDV+ Y L L + QV+ AF L
Sbjct: 236 DLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLL 295
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+E+ R G D Y + +DGLCK+ I EA +L + +
Sbjct: 296 EEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEM 333
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/407 (31%), Positives = 190/407 (46%), Gaps = 34/407 (8%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
FD+ V S+N L L K+ H ++K L +G P+L T+ ILI C
Sbjct: 14 FDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNC 73
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K G+ + L + P+ F LI GL + +A LF + P++F
Sbjct: 74 KAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIF 133
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
TYNT+I+GL ++G+ A L EEM G+ PD+VTY
Sbjct: 134 TYNTVISGLCKSGNLEKARELLEEMIRRGGKSA---------------------PDIVTY 172
Query: 184 TSVIR-GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
++I G C D EA +L M G P+V+T+N I+ LC G++ EA+ +L M
Sbjct: 173 NTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM- 231
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
P+ +NTL+DGFC G + RA E+ M V +Y+IL+NG C+ +++
Sbjct: 232 --SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQ 289
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT------- 355
A L E++ +G PDV+ Y +L L + ++E A KL EM + A+
Sbjct: 290 VAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVP 349
Query: 356 --WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+TY + GL K+ I +AV L L D+ YN LIDGL
Sbjct: 350 PLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGL 396
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 174/368 (47%), Gaps = 20/368 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFG-CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
I D M P+P + +I+ C+A V+ + L + PDL T+N L++
Sbjct: 192 ILDGMKLAGPAPDVITYNSIIHALCVAGR-----VVEAAEILKTMSCSPDLVTFNTLLDG 246
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
FCK G + VL + R P+ +T+T L+ GLC ++ A L ++ G P+
Sbjct: 247 FCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPD 306
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
V Y +L++GL ++G A L +EM+ A+E+ +M N+ P +
Sbjct: 307 VIAYTSLVDGLCKSGEIEEAHKLVKEMS--------------AREILAEMVSINMVPPLF 352
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY V+ G ++A L+ +++ +G P+VVT+N ++D LCK ++ EA L D M
Sbjct: 353 TYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEM 412
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+G PN +++ G C GRV+ A L V M V Y+ LI+G CK+ +
Sbjct: 413 ASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRM 472
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A + M +G+ D Y L V + +V A ++DEM G D T +T
Sbjct: 473 DDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 532
Query: 362 IDGLCKNS 369
+ NS
Sbjct: 533 EEAAMSNS 540
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 212/409 (51%), Gaps = 23/409 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD ML R P V +FN + L + +L ++ G+ + +T NI I
Sbjct: 102 LFDEMLR-RDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGL 160
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ GR+ V L + + P+ VT+ +L++GLC +S++ EAA ++ GC P+
Sbjct: 161 CEGGRLEEA-VALVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDD 219
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEM-------------ASGNGEFGVEGFVDKAKELFL 169
FTYNT+I+G + A L ++ + NG EG V++A ELF
Sbjct: 220 FTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLING-LCAEGDVERALELFN 278
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+ + +++ PD+V Y S+++G C A ++ EM++ G P++ T+N++++ LCK G
Sbjct: 279 EAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMG 338
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+ +A+ +++ I G P+ F +NT++DG+C +++ A +L M G +Y+
Sbjct: 339 NISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYN 398
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
++NG CK + + + EM+ KG +P+ + YN L +I+Q+E A + M +D
Sbjct: 399 SVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQD 458
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
G+ DT ++ T I G C+N + A LF+ +LD + Y+ D
Sbjct: 459 GLVPDTISFNTLIHGFCRNGDLDGAYLLFQ-------KLDEKGYSATAD 500
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 193/414 (46%), Gaps = 47/414 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L K+ +R+ + G PD +TYN +I+ +CK + +
Sbjct: 182 PDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATEL 241
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + F P+ VT+ SLI GLCAE + A LF + + +P++ YN+L+ GL R
Sbjct: 242 LKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCR 301
Query: 135 TGHTIVALNLFEEMAS--------------------GN--------GEFGVEGFV----- 161
G + AL + EM GN + V+G++
Sbjct: 302 QGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFT 361
Query: 162 --------------DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
D A +L +M I PD +TY SV+ G C A E EM+
Sbjct: 362 FNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMI 421
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+G +PN +T+N++++ CK +++EAS ++ M Q G+ P+ +NTL+ GFC G ++
Sbjct: 422 LKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLD 481
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A LF ++ G + T +++ILI Y ++ A ++GEM+SKG KPD+ Y L
Sbjct: 482 GAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLV 541
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+ V+RA+ EM G T+ ++ L N + EAV + +
Sbjct: 542 DGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIM 595
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/365 (31%), Positives = 171/365 (46%), Gaps = 13/365 (3%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G P YN +++ V R+L + P+A T T IK C R A
Sbjct: 5 GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM---------ASGNGEFGV 157
L L GC+ Y T++ GLY GH A +LF+EM A+ N
Sbjct: 65 LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124
Query: 158 ---EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
+G + ++ L ++ ++ + T IRG C EA L+E MD + P+
Sbjct: 125 LCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEA-VALVESMDAYIAPD 183
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
VVT+N +M LCK+ K+ EA++ L M+ G P+ F YNT++DG+C + A EL
Sbjct: 184 VVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLK 243
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
G +Y LING C ++E AL L+ E +K +KPD+V+YN+L L
Sbjct: 244 DAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQG 303
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
+ A ++ +EM DG D WTY I+GLCK I +A + + D+ +N
Sbjct: 304 LILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFN 363
Query: 395 CLIDG 399
+IDG
Sbjct: 364 TMIDG 368
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 181/422 (42%), Gaps = 59/422 (13%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR------ 67
PP ++N + L ++D ++ R+ S G+ PD T+ + I FC GR
Sbjct: 7 PPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALR 66
Query: 68 ------------------------VSHGFVVLGR-----ILRSCFTPNAVTFTSLIKGLC 98
+HG R +LR P+ TF +++ LC
Sbjct: 67 LLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALC 126
Query: 99 AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE 158
+ IME+ AL K+ G N FT N I GL G A+ L E M
Sbjct: 127 QKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM---------- 176
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
D I PDVVTY +++RG C + EA L MM+QG P+ T+
Sbjct: 177 --------------DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTY 222
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
N I+D CK + EA+ LL I G P+ Y +L++G C G V RA ELF ++
Sbjct: 223 NTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQA 282
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
+ Y+ L+ G C+ I AL + EM+ G PD+ YN + L ++ +
Sbjct: 283 KDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISD 342
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A + ++ G D +T+ T IDG CK + A++L + + D YN +++
Sbjct: 343 AAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLN 402
Query: 399 GL 400
GL
Sbjct: 403 GL 404
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 146/357 (40%), Gaps = 92/357 (25%)
Query: 113 LRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMK 172
+ +FGC P YN +++ L T + D+A +++++M
Sbjct: 1 MDLFGCPPAAPAYNAIMDALVNTA-----------------------YHDQAHKVYVRML 37
Query: 173 DENINPDVVTYTSVIRGFC----------------------------------YANDWN- 197
+ PD T+T I+ FC YA+
Sbjct: 38 SAGVAPDARTHTVRIKSFCITGRPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGY 97
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG------------ 245
+A+ L EM+ + V P+V TFN ++ LC+ G + E+ LL +++ G
Sbjct: 98 DARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWI 157
Query: 246 ----------------------VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
+ P+ YNTLM G C +V A + M + GC
Sbjct: 158 RGLCEGGRLEEAVALVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIP 217
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
F+Y+ +I+GYCK ++ A L + + KG PD V Y +L L VERA +LF
Sbjct: 218 DDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELF 277
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+E Q + D Y + + GLC+ I+ A+++ + C DI YN +I+GL
Sbjct: 278 NEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGL 334
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/413 (30%), Positives = 191/413 (46%), Gaps = 47/413 (11%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
D VL + + S G+ +L TYN+LI+ CK G++ +L ++ PN+ TF L
Sbjct: 62 DEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLL 121
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA-SGN 152
I+G C E + A L ++ P+ +Y +INGL +A L E+M SG
Sbjct: 122 IEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGL 181
Query: 153 GE-----------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
+ EG +++A+ L M + PD+ Y ++I A EA
Sbjct: 182 KPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 241
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG-- 259
L+E+ +G++P+ VTF + K GKM EA++ D M+ G+ PN +Y L++G
Sbjct: 242 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 301
Query: 260 ---------------------------------FCLTGRVNRAKELFVSMESMGCTHTVF 286
GRV A ++F ++ G VF
Sbjct: 302 KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 361
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+YS LI+G+CK E+E A L+ EM KGI P++ IYN L L + ++RA KLFD M
Sbjct: 362 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 421
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G+ D+ TY T IDG CK+ + EA LF + + YN L+ G
Sbjct: 422 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG 474
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 201/430 (46%), Gaps = 71/430 (16%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L A + L ++ +G+ PD++ YN +I+C K G++
Sbjct: 183 PNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 242
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L I P+AVTF + I G ++ EAA F ++ G PN Y LING ++
Sbjct: 243 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFK 302
Query: 135 TGHTIVALNLFEEMASGNGEFGV----------------EGFVDKAKELFLQMKDENINP 178
G+ + AL++F + + GV G V +A ++F ++K++ + P
Sbjct: 303 AGNLMEALSIFRHLHA----LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVP 358
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
DV TY+S+I GFC + +A L EM +G+ PN+ +N ++D LCK+G + A +L
Sbjct: 359 DVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLF 418
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT---------------- 282
D M + G+ P++ Y+T++DG+C + V A LF M S G
Sbjct: 419 DGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKE 478
Query: 283 ------------------HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
T S++ LI+GYCK+ +I+ A L+ EM++K I PD V Y
Sbjct: 479 GDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYT 538
Query: 325 TLFV------------VLFEIHQ-----VERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
T+ +LF+ Q V+ F LF++M GV D TY I CK
Sbjct: 539 TVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCK 598
Query: 368 NSYIVEAVEL 377
+VEA +L
Sbjct: 599 EDNLVEAFKL 608
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 198/413 (47%), Gaps = 46/413 (11%)
Query: 4 FDYMLN--MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
FD ML+ + P+ P + +L K + LS+F+ L++ G+ PD+ T + I+
Sbjct: 278 FDEMLDHGLMPNNP---LYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHG 334
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
K GRV V + P+ T++SLI G C + + +A L ++ + G PN
Sbjct: 335 LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPN 394
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
+F YN L++GL ++G + +A++LF M ++ + PD V
Sbjct: 395 IFIYNALVDGLCKSGD-----------------------IQRARKLFDGMPEKGLEPDSV 431
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY+++I G+C + + EA L EM +GVQP+ +N ++ CK G M++A L M
Sbjct: 432 TYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM 491
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+Q G +NTL+DG+C + ++ A +LF M + +Y+ +I+ +CK ++
Sbjct: 492 LQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKM 550
Query: 302 EGA-----------------LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
E A +L+ +M++KG+KPD V Y + + + AFKL D
Sbjct: 551 EEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRD 610
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
E+ G+ + I LCK + EA +L + L + + A + L+
Sbjct: 611 EVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLV 663
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 119/398 (29%), Positives = 189/398 (47%), Gaps = 15/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F +L + + L L + L P +Y +IN C +S +
Sbjct: 113 PNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKL 172
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ S PN V +++LI G +E RI EA L + G P++F YN +I+ L +
Sbjct: 173 LEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSK 232
Query: 135 TGHTIVALNLFEEMASGNG------EFGV-------EGFVDKAKELFLQMKDENINPDVV 181
G A E+ G G FG G + +A + F +M D + P+
Sbjct: 233 AGKMEEASTYLLEI-QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 291
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
YT +I G A + EA + + GV P+V T + + L KNG++ EA ++ +
Sbjct: 292 LYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 351
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G+ P+ F Y++L+ GFC G V +A EL M G +F Y+ L++G CK+ +I
Sbjct: 352 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 411
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A L+ M KG++PD V Y+T+ + V AF LF EM GV ++ Y
Sbjct: 412 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 471
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ G CK + +A+ LFR + + K ++N LIDG
Sbjct: 472 VHGCCKEGDMEKAMNLFREM-LQKGFATTLSFNTLIDG 508
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 196/399 (49%), Gaps = 14/399 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ I+ L + K + F+ + TGL PD + LI+ F + G + +
Sbjct: 8 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDE-VLR 66
Query: 75 LGRILRSCFTP-NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ ++ SC P N +T+ LI GLC ++ +AA + + GC+PN T+ LI G
Sbjct: 67 IKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYC 126
Query: 134 RTGHTIVALNLFEEMASGN-----GEFG--VEGF-----VDKAKELFLQMKDENINPDVV 181
R + AL L +EM N +G + G + A +L +M + P+VV
Sbjct: 127 REHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVV 186
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y+++I G+ EA+ LL M GV P++ +N I+ L K GKM+EAS L +
Sbjct: 187 VYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 246
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
G++P+A + + G+ TG++ A + F M G Y++LING+ K +
Sbjct: 247 QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNL 306
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
ALS++ + + G+ PDV + L + +V+ A K+F E++ G+ D +TY +
Sbjct: 307 MEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL 366
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I G CK + +A EL + + +I YN L+DGL
Sbjct: 367 ISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 405
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 173/369 (46%), Gaps = 12/369 (3%)
Query: 43 LNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 102
+ GL P+ YTY I+ C+ R++ + + ++ P+ ++LI G E
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE-------F 155
I E + + G N+ TYN LI+GL + G A + + M + +
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120
Query: 156 GVEGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG 210
+EG+ + +A EL +M+ N+ P V+Y ++I G C+ D + A LL +M G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
++PNVV ++ ++ G+++EA RLLD M GV P+ F YN ++ G++ A
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
+ ++ G ++ I GY K ++ A + EML G+ P+ +Y L
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
F+ + A +F + GV D T FI GL KN + EA+++F L+ D+
Sbjct: 301 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 360
Query: 391 RAYNCLIDG 399
Y+ LI G
Sbjct: 361 FTYSSLISG 369
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 180/396 (45%), Gaps = 30/396 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + + L KN L +F L GL PD++TY+ LI+ FCK G V F +
Sbjct: 323 PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFEL 382
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ PN + +L+ GLC I A LF + G EP+ TY+T+I+G +
Sbjct: 383 HDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCK 442
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
+ + A +LF EM S + EG ++KA LF +M + ++
Sbjct: 443 SENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLS 501
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS------- 235
+ ++I G+C + EA L EM+ + + P+ VT+ ++D CK GKM+EA+
Sbjct: 502 FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQ 561
Query: 236 ----------RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
L + M+ GV+P+ Y ++ C + A +L + G
Sbjct: 562 ERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKG 621
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
+ +LI CK +++ A L EM G+KP + +TL E +++ A ++F+
Sbjct: 622 TIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEG 681
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
++ G+ DT T ++G ++ +A L + L
Sbjct: 682 VKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 717
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 163/363 (44%), Gaps = 67/363 (18%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ L K + L + G+ P+++ YN L++ CK G + +
Sbjct: 358 PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKL 417
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ P++VT++++I G C + EA +LF ++ G +P+ F YN L++G +
Sbjct: 418 FDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCK 477
Query: 135 TGHTIVALNLFEEMASGNGEFG--------VEGF-----VDKAKELFLQMKDENINPDVV 181
G A+NLF EM F ++G+ + +A +LF +M + I PD V
Sbjct: 478 EGDMEKAMNLFREMLQKG--FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHV 535
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMD-----------------QGVQPNVVTFNVIM-- 222
TYT+VI C A EA L EM + +GV+P+ VT+ +++
Sbjct: 536 TYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYA 595
Query: 223 --------------DE-------------------LCKNGKMDEASRLLDLMIQIGVRPN 249
DE LCK + EAS+LLD M ++G++P+
Sbjct: 596 HCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPS 655
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
+TL+ F G+++ A +F ++S+G + L+NG + + E A +L
Sbjct: 656 LAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIK 715
Query: 310 EML 312
+++
Sbjct: 716 QLV 718
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/382 (31%), Positives = 184/382 (48%), Gaps = 26/382 (6%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
++L KN D L F R G + N ++ K GR+ V ++R
Sbjct: 163 DMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIR 222
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
N VTF +I GLC + +A + ++ +G P+V TYNT+I+G + G
Sbjct: 223 RRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFK 282
Query: 141 ALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
A L +EM + + I+P+ +T+ +I GFC + AK
Sbjct: 283 ADALLKEMVA-----------------------KRIHPNEITFNILIDGFCRDENVTAAK 319
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
+ EM QG+QPNVVT+N +++ LC NGK+DEA L D M +G++PN YN L++GF
Sbjct: 320 KVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGF 379
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
C + A+E+ + G V +++ LI+ Y K ++ A L ML G+ P+V
Sbjct: 380 CKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNV 439
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
YN L V V+ A KL EM+ +G+ AD TY +D LCK +AV L
Sbjct: 440 STYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDE 499
Query: 381 LRILKCE---LDIRAYNCLIDG 399
+ +++ + +I YN LI G
Sbjct: 500 MTLMEKKGRRANIVTYNVLIKG 521
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/360 (31%), Positives = 182/360 (50%), Gaps = 26/360 (7%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +F+++ L K + + + + + G P + TYN +I+ +CK G++ +L
Sbjct: 229 VVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLK 288
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ PN +TF LI G C + + A +F +++ G +PNV TYN+LINGL G
Sbjct: 289 EMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNG 348
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
AL L ++M SG G + P+VVTY ++I GFC
Sbjct: 349 KLDEALGLQDKM-SGMG----------------------LKPNVVTYNALINGFCKKKML 385
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
EA+ +L ++ +G+ PNV+TFN ++D K G+MD+A L +M+ GV PN YN L
Sbjct: 386 KEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCL 445
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML---S 313
+ GFC G V A++L ME G + +Y+IL++ CK E A+ L EM
Sbjct: 446 IVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEK 505
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG + ++V YN L ++E A +L +EM G+ + TY D + + +I +
Sbjct: 506 KGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPD 565
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 183/380 (48%), Gaps = 26/380 (6%)
Query: 23 LFGCLAKNKHYDTVLSLFKRLNSTGLF--PDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
L AKN HY ++F L+ G + + ++L+ + K G + R
Sbjct: 129 LLDSFAKNAHYSNS-TIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGD 187
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
F +A++ ++ L E RI +++ ++ NV T++ +INGL + G
Sbjct: 188 YGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGK--- 244
Query: 141 ALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
KA ++ MK +P V+TY ++I G+C A +A
Sbjct: 245 --------------------FQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKAD 284
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
LL EM+ + + PN +TFN+++D C++ + A ++ + M + G++PN YN+L++G
Sbjct: 285 ALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGL 344
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
C G+++ A L M MG V +Y+ LING+CK K ++ A + ++ +G+ P+V
Sbjct: 345 CSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNV 404
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
+ +NTL + +++ AF L M GV + TY I G C+ + EA +L +
Sbjct: 405 ITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKE 464
Query: 381 LRILKCELDIRAYNCLIDGL 400
+ + D+ YN L+D L
Sbjct: 465 MEGNGLKADLVTYNILVDAL 484
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 151/321 (47%), Gaps = 31/321 (9%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + K +L K + + + P+ T+NILI+ FC+ V+ V
Sbjct: 262 PSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKV 321
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R PN VT+ SLI GLC+ ++ EA L K+ G +PNV TYN LING +
Sbjct: 322 FEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCK 381
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
A + +++ +G G +D A L M D + P+V T
Sbjct: 382 KKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVST 441
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD--- 239
Y +I GFC + EA+ L EM G++ ++VT+N+++D LCK G+ +A RLLD
Sbjct: 442 YNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMT 501
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
LM + G R N YN L+ GFC G++ A L M G +Y IL +
Sbjct: 502 LMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRD------ 555
Query: 300 EIEGALSLYGEMLSKGIKPDV 320
EM+ KG PD+
Sbjct: 556 ----------EMMEKGFIPDI 566
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 59/141 (41%), Gaps = 3/141 (2%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V +FN L K D L + TG+ P++ TYN LI FC+ G V
Sbjct: 398 RGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKE 457
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF---GCEPNVFTYNT 127
+ + + + VT+ L+ LC + +A L ++ + G N+ TYN
Sbjct: 458 ARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNV 517
Query: 128 LINGLYRTGHTIVALNLFEEM 148
LI G G A L EM
Sbjct: 518 LIKGFCNKGKLEEANRLLNEM 538
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 185/398 (46%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+N + L + + V L + + + G P++ T++ LI C+ G V
Sbjct: 215 PDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEV 274
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ P+ + ++I G+C E R+ A + ++ +G PNV YNTL+ GL
Sbjct: 275 HAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCS 334
Query: 135 TGHTIVALNLFEEMASGNGEFG------------VEGFVDKAKELFLQMKDENINPDVVT 182
A L EM + G VD+ E+ QM + PDV+T
Sbjct: 335 ADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVIT 394
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+VI GFC +EA LL M G +PN V++ +++ LC + +A L+ MI
Sbjct: 395 YTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMI 454
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q G PN +NTL++ C G V +A EL M GC+ + SYS +I+G K +
Sbjct: 455 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTD 514
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL L M+ KG+ P+ +IY+++ L ++ + ++F+ +Q V +D Y I
Sbjct: 515 EALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVI 574
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LCK A+E + C + Y LI GL
Sbjct: 575 SSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGL 612
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 192/384 (50%), Gaps = 18/384 (4%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P+PP +++ + + + + + L+ G D+ N+++ C G V
Sbjct: 144 PTPP---MYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEA 200
Query: 72 FVVLGRILRS--CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
+L +L S C P+ V++ ++++GLC R L ++ GC PN+ T++TLI
Sbjct: 201 VRLLRDLLPSFGC-EPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLI 259
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENIN 177
L R G + +MA V E ++ A+ + +M ++
Sbjct: 260 GHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLS 319
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P+VV Y ++++G C A+ W EA+ LL EM D+ + VTFN+++D LC+NG +D +
Sbjct: 320 PNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEV 379
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
L+ M++ G P+ Y T+++GFC G ++ A L SM + GC SY+I++ G C
Sbjct: 380 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCS 439
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+ A L +M+ +G P+ V +NTL L + VE+A +L +M +G + D +
Sbjct: 440 AERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 499
Query: 358 YRTFIDGLCKNSYIVEAVELFRTL 381
Y T IDGL K EA+EL +
Sbjct: 500 YSTVIDGLGKAGNTDEALELLNVM 523
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 180/381 (47%), Gaps = 14/381 (3%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + +F+ L G L +N ++ V + ++ G PD+ Y +I+ CK R+
Sbjct: 249 PPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARG 308
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L R+ +PN V + +L+KGLC+ R EA L ++ C + T+N L++ L
Sbjct: 309 ILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLC 368
Query: 134 RTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDV 180
+ G + + E+M NG F EG +D+A L M P+
Sbjct: 369 QNGLVDRVIEVLEQMLEHGCMPDVITYTTVING-FCKEGLIDEAVMLLRSMAACGCRPNT 427
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
V+YT V++G C A W +A+ L+ +M+ QG PN VTFN +++ LCK G +++A LL
Sbjct: 428 VSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 487
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M+ G P+ Y+T++DG G + A EL M G + YS + +
Sbjct: 488 MLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGR 547
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
I + ++ + ++ D V+YN + L + + +RA + M G + TY
Sbjct: 548 INKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTI 607
Query: 361 FIDGLCKNSYIVEAVELFRTL 381
I GL ++ EA E+ L
Sbjct: 608 LIRGLASEGFVKEAQEILTEL 628
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 149/347 (42%), Gaps = 29/347 (8%)
Query: 55 YNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLR 114
YN ++ +C+ G+++ + + PNA T+ L++ LCA RI +A A+ +
Sbjct: 82 YNAMVAGYCRAGQLAAARRLAASVP---VAPNAYTYFPLVRALCARGRIADALAVLDDMA 138
Query: 115 VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG-NGEFGVEGFVDKAKELFLQMKD 173
GC P Y+ + R ASG G GV +
Sbjct: 139 RRGCAPTPPMYHVTLEAACR--------------ASGFRGAVGV----------LRDLHG 174
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMD 232
DV V++ C +EA LL +++ G +P+VV++N ++ LC +
Sbjct: 175 RGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWG 234
Query: 233 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
L++ M+ G PN ++TL+ C G R E+ M GC V Y+ +I
Sbjct: 235 HVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATII 294
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
+G CK + +E A + M S G+ P+VV YNTL L + E A L EM
Sbjct: 295 DGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCP 354
Query: 353 ADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
D T+ +D LC+N + +E+ + C D+ Y +I+G
Sbjct: 355 LDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVING 401
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 200/395 (50%), Gaps = 14/395 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N L + + L + + + FP L TYN L+ CK +V+ + +
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
L+S FTP+ V+F SL+ G C I EA LF +L+ P V TYNTLI+GL G+
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406
Query: 139 IVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
AL L +EM NG F + G+V A+ F +M + + PD Y +
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKL-GYVSMARGFFNEMLSKGLKPDRFAYNT 465
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
I G D + A + EM+ G P+V+T+NV + LC+ G +EA LL+ M+ G
Sbjct: 466 RIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDG 525
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
+ P+ Y ++++GF G + +A+E+F M S G +V +Y++LI+ + + ++ A
Sbjct: 526 LIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAF 585
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
+ +ML K + +V+ YN + L +++ A+K FDEM+ G+ + ++Y I+
Sbjct: 586 MYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINES 645
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
C Y EA+ L+R + K + D ++ + L
Sbjct: 646 CNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNL 680
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 185/398 (46%), Gaps = 14/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + N + L +++ + G+ P + TYN +++ +CK GRV +
Sbjct: 178 PDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALEL 237
Query: 75 LGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
L + R C+ PN VT+ L+ GL + + +A L ++ G + +TYN LING
Sbjct: 238 LSEMQERGCY-PNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFC 296
Query: 134 RTGHTIVALNLFEEMASGNG----------EFGVEGFVD--KAKELFLQMKDENINPDVV 181
+ G + A +L EEM + +G+ +V + F M PD+V
Sbjct: 297 QKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIV 356
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
++ S++ G+C +EA L E+ + + P V+T+N ++ LC G +D A RL M
Sbjct: 357 SFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEM 416
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
G+ P+ F Y L++G G V+ A+ F M S G F+Y+ I G K +
Sbjct: 417 TDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADT 476
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A S+ EML+ G PDV+ YN L + E A L + M DG+ D TY +
Sbjct: 477 SVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSI 536
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I+G KN ++ +A E+F + + Y LI
Sbjct: 537 INGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHA 574
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 173/376 (46%), Gaps = 14/376 (3%)
Query: 37 LSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 96
L +F ++ GL PD+ N ++ +S V G + + P VT+ +++
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG----- 151
C E R+ +A L ++++ GC PN TYN L+NGL + G A L EEM +
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284
Query: 152 --------NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
NG F +G +A +L +M + P + TY +++ G C +
Sbjct: 285 AYTYNPLING-FCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRF 343
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
+M+ P++V+FN ++ C+ G + EA L D + + P YNTL+ G C+
Sbjct: 344 SDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMW 403
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
G ++ A L M G +F+Y+IL+NG K + A + EMLSKG+KPD Y
Sbjct: 404 GYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAY 463
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
NT V +I AF + +EM G D TY F+ LC+ EA +L +
Sbjct: 464 NTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVS 523
Query: 384 LKCELDIRAYNCLIDG 399
D Y +I+G
Sbjct: 524 DGLIPDHVTYTSIING 539
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 160/340 (47%), Gaps = 30/340 (8%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +FD L R P V ++N L L + D L L K + GLFPD++TY IL+N
Sbjct: 375 FLLFDE-LKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVN 433
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT---KLRVFG 117
K+G VS +L P+ + + I G E +I + + F+ ++ G
Sbjct: 434 GCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVG---EMKIADTSVAFSMQEEMLAAG 490
Query: 118 CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENIN 177
P+V TYN ++ L + G+ A +L E M S +G +
Sbjct: 491 FPPDVITYNVFVHALCQQGNFEEACDLLENMVS-------DGLI---------------- 527
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
PD VTYTS+I GF +A+ + EM+ +GV P+VVT+ V++ +D A
Sbjct: 528 PDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMY 587
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
M++ V N YN +++G C+T R++ A + F ME G FSY+ILIN C
Sbjct: 588 FSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCN 647
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
E AL LY EML + I+PD ++ L +QV
Sbjct: 648 MGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVH 687
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 115/234 (49%)
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
+F +M + PDV ++R N ++AK + M G++P VVT+N ++D C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
K G++D+A LL M + G PN YN L++G G + +AK L M + G + +
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+Y+ LING+C+ A L EM+++ P + YNTL L + QV F +M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ D ++ + + G C+ I EA LF L+ + YN LI GL
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGL 400
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 108/230 (46%), Gaps = 24/230 (10%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP V ++N+ L + +++ L + + S GL PD TY +IN F K G +
Sbjct: 492 PPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKARE 551
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
V +L P+ VT+T LI A+ + A F+K+ NV TYN +INGL
Sbjct: 552 VFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLC 611
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
T +D+A + F +M+++ I P+ +YT +I C
Sbjct: 612 MTRR-----------------------MDEAYKYFDEMEEKGILPNKFSYTILINESCNM 648
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
W EA L EM+D+ +QP+ T +V + L ++ ++ A + ++ +IQ
Sbjct: 649 GYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQV-HAVQCVESLIQ 697
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 15/164 (9%)
Query: 240 LMIQIGVRPNAFVYNTLMD---GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+M Q + + FV+ ++D G L E VS E G +LI G+
Sbjct: 109 VMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVV------DVLIAGHV 162
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
L ++ +M+ G+ PDV N + VL + + + +A ++ M++ G+
Sbjct: 163 X------CLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVV 216
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY T +D CK + +A+EL ++ C + YN L++GL
Sbjct: 217 TYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGL 260
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/378 (31%), Positives = 194/378 (51%), Gaps = 14/378 (3%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 95
LSL + + G P + TYN I CK+GR+S L +L + P+ V++ +LI
Sbjct: 323 ALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIY 382
Query: 96 GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG---- 151
G C +M+A LF +LR P + TYNTL++GL R G VA L EM +
Sbjct: 383 GYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAP 442
Query: 152 ---------NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
NG + G + A+E F +M E + D Y + I G D + A L
Sbjct: 443 DIVTYTILVNGSCKM-GSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSL 501
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
EM+ +G P+++ +NV++D LCK G ++EAS LL M+ GV P+ Y +++
Sbjct: 502 QEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLE 561
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
GR+ + +E+F M S G T +V +Y++LI+G+ +E A + EM KGI P+V+
Sbjct: 562 NGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVIT 621
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
YN+L L ++ ++++A+ F EM G+ + ++Y I+ C EA+ L++ +
Sbjct: 622 YNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQML 681
Query: 383 ILKCELDIRAYNCLIDGL 400
+ D ++ L+ L
Sbjct: 682 DRGVQPDSCTHSALLKQL 699
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 122/411 (29%), Positives = 196/411 (47%), Gaps = 13/411 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+FD M+ R SP V + N + L + +++ + G+ P + TYN L++
Sbjct: 184 LSVFDKMIKSRLSPD-VKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLD 242
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+CK G+V G +L + R PN VT+ LI GL + +A L ++ G +
Sbjct: 243 SYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKV 302
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELF 168
+ +TYN LI G + G AL+L EEM V G + A +
Sbjct: 303 SAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQL 362
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
M N+ PDVV+Y ++I G+C + +A L E+ + P +VT+N ++D LC+
Sbjct: 363 SDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQ 422
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G+++ A +L MI G+ P+ Y L++G C G ++ A+E F M G ++Y
Sbjct: 423 GELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAY 482
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ I G K + A SL EML+KG PD++IYN + L ++ +E A +L +M
Sbjct: 483 ATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVS 542
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
DGV D TY + I +N + + E+F + + Y LI G
Sbjct: 543 DGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHG 593
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 156/325 (48%), Gaps = 12/325 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+N L + + LF L S LFP + TYN L++ C+ G + +
Sbjct: 372 PDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQL 431
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ P+ VT+T L+ G C + A F ++ G E + + Y T I G +
Sbjct: 432 KVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELK 491
Query: 135 TGHTIVALNLFEEMASGN-------GEFGVEGF-----VDKAKELFLQMKDENINPDVVT 182
G T A +L EEM + V+G +++A EL +M + + PD VT
Sbjct: 492 LGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVT 551
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YTS+I + + + EM+ +G+ P+VVT+ V++ G+++ A M
Sbjct: 552 YTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQ 611
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ PN YN+L++G C R+++A F M G +SY+ILIN C +
Sbjct: 612 EKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQ 671
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLF 327
ALSLY +ML +G++PD ++ L
Sbjct: 672 EALSLYKQMLDRGVQPDSCTHSALL 696
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 122/246 (49%)
Query: 155 FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
+ + V++ +F +M ++PDV ++R + ++A + M + G++P
Sbjct: 174 YSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPT 233
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
+VT+N ++D CK GK+ + LL M + G PN YN L++G G +AK L
Sbjct: 234 IVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIG 293
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
M G + ++Y+ LI GY + ALSL EM+ KG P V YN+ L ++
Sbjct: 294 EMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLG 353
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
++ A + +M + + D +Y T I G C+ +++A LF LR + I YN
Sbjct: 354 RMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYN 413
Query: 395 CLIDGL 400
L+DGL
Sbjct: 414 TLLDGL 419
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 113/228 (49%), Gaps = 23/228 (10%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + +N++ L K + + L +++ S G+ PD TY +I+ + GR+ G
Sbjct: 511 PPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGRE 570
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ +L TP+ VT+T LI G + R+ A F++++ G PNV TYN+LINGL
Sbjct: 571 IFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLC 630
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ +D+A F +M ++ I P+ +YT +I C
Sbjct: 631 KVRR-----------------------MDQAYNFFAEMVEKGIFPNKYSYTILINENCNM 667
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+W EA L +M+D+GVQP+ T + ++ +L K+ K+ +L L+
Sbjct: 668 GNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQLESLL 715
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 14/172 (8%)
Query: 243 QIGVRPNAFVY----------NTLMDGFCLTGRV-NRAKELFVSMESMGCTHTVFSYSIL 291
Q G R + FV+ N + + + RV N V + GC + S IL
Sbjct: 108 QPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKIL 167
Query: 292 ---INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
I Y K +E LS++ +M+ + PDV N + +L + + +A +++ M
Sbjct: 168 DLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGE 227
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G+ TY T +D CK + + ++L ++ C + YN LI+GL
Sbjct: 228 FGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGL 279
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/402 (31%), Positives = 191/402 (47%), Gaps = 22/402 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + + LAK + D VL LF + S G+ PD+Y Y +I FC++ + +
Sbjct: 191 PQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEM 250
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R+ S N V + LI GLC R+ EA + L G + TY TL+ GL +
Sbjct: 251 IQRMESSDL--NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCK 308
Query: 135 TGHTIVALNLFEEMASGNGEFG-----------VEGFVDKAK-----ELFLQMKDENINP 178
V + +EM E G VEG K K +L ++K P
Sbjct: 309 VQEFEVGAGVMDEMI----ELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMP 364
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
+ Y ++I C ++EA+ L EM ++G+ N VT+++++D C+ GK+D A L
Sbjct: 365 SLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFL 424
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
MI G++ + YN+L++G C G ++ A F M G TV SY+ LI+GYC
Sbjct: 425 GKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNK 484
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
++ A LY EM KGI P+ + TL LF +++ AF+LFDEM + + TY
Sbjct: 485 GKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTY 544
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I+G CK V+A EL + D Y LI L
Sbjct: 545 NVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSL 586
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 199/445 (44%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M+ + P +++ G K K D L R+ G P L+ YN LIN
Sbjct: 318 VMDEMIELGFVPTEAALSSLVEGLRRKGKVVDA-FDLVNRVKKVGAMPSLFVYNALINSL 376
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G+ ++ + N VT++ LI C ++ A K+ + G + V
Sbjct: 377 CKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITV 436
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV-------EGFVDKAK-----ELFLQ 170
+ YN+LING + G+ A++ F+EM + V G+ +K K L+ +
Sbjct: 437 YPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHE 496
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + I P+ T+T++I AN +A L EM++Q + PN VT+NV+++ CK G
Sbjct: 497 MTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGN 556
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+A LL+ M+Q G+ P+ + Y L+ C TGRV AK+ + YS
Sbjct: 557 TVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSA 616
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGI---------------------------------- 316
L++GYCK + AL + EM+ +G+
Sbjct: 617 LLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQR 676
Query: 317 -KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+PD VIY ++ + V++AF ++D M +G + TY T I+ LCK + +A
Sbjct: 677 LRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAE 736
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
L++ + + + Y C +D L
Sbjct: 737 LLWKEMLVSNSTPNHVTYCCFLDHL 761
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 181/380 (47%), Gaps = 14/380 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +FD ML P V ++N++ K + L ++ GL PD YTY LI+
Sbjct: 526 FRLFDEMLEQNMMPNEV-TYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLIS 584
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C GRV + + R F N + +++L+ G C E R+ +A + ++ G +
Sbjct: 585 SLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDM 644
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEM------------ASGNGEFGVEGFVDKAKELF 168
++ Y LI+G + T L + M S + G V KA ++
Sbjct: 645 DLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIW 704
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
M DE P++VTYT++I C A ++A+ L EM+ PN VT+ +D L +
Sbjct: 705 DIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLARE 764
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G M++A +L + M++ G+ N YN L+ GFC GRV A +L M +Y
Sbjct: 765 GSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITY 823
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
S +I C+ ++GA+ + ML+KG+KPD + YN L ++ +AF+L D+M R
Sbjct: 824 STIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIR 883
Query: 349 DGVAADTWTYRTFIDGLCKN 368
GV + T+++ G +
Sbjct: 884 RGVKPNQATHKSLSHGASRK 903
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 177/402 (44%), Gaps = 12/402 (2%)
Query: 10 MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS 69
M S V +N+L L KNK + + L GL TY L+ CK+
Sbjct: 254 MESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFE 313
Query: 70 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
G V+ ++ F P +SL++GL + ++++A L +++ G P++F YN LI
Sbjct: 314 VGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALI 373
Query: 130 NGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENIN 177
N L + G A LF+EM F G +D A +M I
Sbjct: 374 NSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIK 433
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
V Y S+I G C + + A EM+D+G++P VV++ ++ C GK+ EA RL
Sbjct: 434 ITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRL 493
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
M G+ PN + + TL+ R+ A LF M +Y+++I G+CK
Sbjct: 494 YHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCK 553
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
A L +M+ KG+ PD Y L L +V A K D++ R+ +
Sbjct: 554 EGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMC 613
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
Y + G CK + +A+ + R + ++D+ Y LIDG
Sbjct: 614 YSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDG 655
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 182/407 (44%), Gaps = 48/407 (11%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+++IL + DT + ++ G+ +Y YN LIN CK+G +S +
Sbjct: 403 TYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEM 462
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ P V++TSLI G C + ++ EA L+ ++ G PN +T+ TLI+ L+R
Sbjct: 463 IDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRM 522
Query: 139 IVALNLFEEMASGNG-----EFGV-------EGFVDKAKELFLQMKDENINPDVVTYTSV 186
A LF+EM N + V EG KA EL QM + + PD TY +
Sbjct: 523 TDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPL 582
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I C EAK + ++ + + N + ++ ++ CK G++ +A + M++ GV
Sbjct: 583 ISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGV 642
Query: 247 -----------------------------------RPNAFVYNTLMDGFCLTGRVNRAKE 271
RP+ +Y +++DG+ G V +A
Sbjct: 643 DMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFG 702
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
++ M GCT + +Y+ LIN CK ++ A L+ EML P+ V Y L
Sbjct: 703 IWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLA 762
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
+E+A +L ++M + G+ A+T +Y + G CK + EA +L
Sbjct: 763 REGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLL 808
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 189/408 (46%), Gaps = 14/408 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
FD M++ P V +++ G K K ++ L+ + G+ P+ YT+ LI+
Sbjct: 459 FDEMIDKGLKPTVVSYTSLISGYCNKGKLHEA-FRLYHEMTGKGIAPNTYTFTTLISALF 517
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ R++ F + +L PN VT+ +I+G C E ++A L ++ G P+ +
Sbjct: 518 RANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTY 577
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFG------------VEGFVDKAKELFLQM 171
TY LI+ L TG A +++ + + EG + A + +M
Sbjct: 578 TYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREM 637
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
++ D+V Y +I G D + LL M DQ ++P+ V + ++D K G +
Sbjct: 638 VKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSV 697
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
+A + D+MI G PN Y TL++ C G +++A+ L+ M T +Y
Sbjct: 698 KKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCF 757
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
++ + +E A+ L+ +ML KG+ + V YN L ++ +VE A KL DEM + +
Sbjct: 758 LDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAI 816
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
D TY T I C+ + A+E + T+ + D AYN LI G
Sbjct: 817 FPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYG 864
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 109/461 (23%), Positives = 188/461 (40%), Gaps = 97/461 (21%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
SF IL L + SL + L G + L++CF K
Sbjct: 107 SFCILIHALVNANLFWPASSLLQTLLLRGGLDPREVFEALLDCFEK-------------- 152
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
C +++ F LI+ E R+ ++ +F +R P V T ++NGL +
Sbjct: 153 ---CDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRV 209
Query: 139 IVALNLFEEMASGNGEFGVEGFV------------DKAKELFLQMKDENINPDV------ 180
+ L LF E+ S + +V KAKE+ +M+ ++N V
Sbjct: 210 DMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLNVVVYNVLIH 269
Query: 181 ---------------------------VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
VTY +++ G C ++ ++ EM++ G P
Sbjct: 270 GLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVP 329
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
+ +++ L + GK+ +A L++ + ++G P+ FVYN L++ C G+ + A+ LF
Sbjct: 330 TEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLF 389
Query: 274 VSMESMG-CTH----------------------------------TVFSYSILINGYCKN 298
M G C + TV+ Y+ LING+CK
Sbjct: 390 KEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKL 449
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+ A+S + EM+ KG+KP VV Y +L ++ AF+L+ EM G+A +T+T+
Sbjct: 450 GNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTF 509
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
T I L + + + +A LF + + YN +I+G
Sbjct: 510 TTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEG 550
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 3/200 (1%)
Query: 202 LLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
L+ +M Q + P V T +++ L K ++D L ++ +G+RP+ ++Y ++ F
Sbjct: 179 LIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSF 238
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
C +AKE+ MES V Y++LI+G CKNK + A+ + ++ KG+
Sbjct: 239 CELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASE 296
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
V Y TL + L ++ + E + DEM G + ++GL + +V+A +L
Sbjct: 297 VTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNR 356
Query: 381 LRILKCELDIRAYNCLIDGL 400
++ + + YN LI+ L
Sbjct: 357 VKKVGAMPSLFVYNALINSL 376
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 186/401 (46%), Gaps = 29/401 (7%)
Query: 22 ILFGCLAKNKHYDTVLS-------------LFKRLNSTGLFPDLYTYNILINCFCKMGRV 68
+L GC A +D V+ L R+ + G P + TY L+ C++ +
Sbjct: 237 LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQA 296
Query: 69 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTL 128
+LGR+ N V F ++I G AE ++ EA L+ + + GC+P+ TY+ L
Sbjct: 297 DEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSIL 352
Query: 129 INGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENI 176
++GL + G A+ L EM F G D + L +M + +
Sbjct: 353 MHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGL 412
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
+ Y +I C +EA L+ EM QG P++ ++N I+ LC N +M+EA
Sbjct: 413 TLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEH 472
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+ + +++ GV N YNT++ GR A L M GC+ V SY+ LI C
Sbjct: 473 MFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMC 532
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K+ ++ +L L EM KGIKP+ V YN L L + +V A +L +M G+A D
Sbjct: 533 KDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIV 592
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
TY T I+GLCK ++ A+ L L DI YN LI
Sbjct: 593 TYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 633
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 196/399 (49%), Gaps = 17/399 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P S+N++ LA+ + L+L++R+ + + P +T+ + C++GR +
Sbjct: 137 PSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALA 196
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L + R P+AV + ++I LC + + EAA L ++ + GC +V T++ ++ G+
Sbjct: 197 LLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMC 256
Query: 134 RTGHTIVALNLFEEMASGNGEFGVE--GFV----------DKAKELFLQMKDENINPDVV 181
G A L + M + GV GF+ D+A+ + ++ + N VV
Sbjct: 257 GLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN----VV 312
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+ +VI G EA L M +G QP+ T++++M LCK G++ A RLL M
Sbjct: 313 LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREM 372
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G PN Y ++ FC G + + L M + G T Y+ +I CK+ +
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 432
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A+ L EM S+G PD+ YNT+ L Q+E A +F+ + +GV A+ TY T
Sbjct: 433 DEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTI 492
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I L ++ +AV L + + + C LD+ +YN LI +
Sbjct: 493 IHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAM 531
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 118/268 (44%), Gaps = 26/268 (9%)
Query: 114 RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKD 173
R FG +P+ +YN +++ L R AL L+ M +
Sbjct: 131 RRFGVQPSFRSYNVVLSVLARADCHADALALYRRM----------------------VHR 168
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
+ + P T+ R C NEA LL M G P+ V + ++ LC G + E
Sbjct: 169 DRVPPTTFTFGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTE 228
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A+ LL+ M+ +G + ++ ++ G C GRV A L M + GC V +Y L+
Sbjct: 229 AATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQ 288
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
G C+ ++ + A + ML + + +VV++NT+ ++ A +L++ M G
Sbjct: 289 GLCRVRQADEARA----MLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQP 344
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTL 381
D TY + GLCK I AV L R +
Sbjct: 345 DAHTYSILMHGLCKLGRISSAVRLLREM 372
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 87/189 (46%), Gaps = 23/189 (12%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N + L ++ + + L K + G D+ +YN LI CK G V V+L +
Sbjct: 488 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM 547
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PN V++ LI LC E R+ +A L ++ G P++ TYNTLINGL + G
Sbjct: 548 AEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWM 607
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
ALNL E ++ +EN++PD++TY +I C ++
Sbjct: 608 HAALNLLE-----------------------KLHNENVHPDIITYNILISWHCKVRLLDD 644
Query: 199 AKCLLIEMM 207
A LL M
Sbjct: 645 AAMLLNRAM 653
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 58/114 (50%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V S+N L + K+ + D L L + + G+ P+ +YNILI+ CK RV +
Sbjct: 521 VVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSK 580
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
++L P+ VT+ +LI GLC + A L KL P++ TYN LI+
Sbjct: 581 QMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 634
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S+NIL L K + L L K++ + GL PD+ TYN LIN CKMG + +
Sbjct: 554 PNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNL 613
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC 118
L ++ P+ +T+ LI C + +AA L + C
Sbjct: 614 LEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVC 657
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 200/395 (50%), Gaps = 14/395 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N L + + L + + + FP L TYN L+ CK +V+ + +
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
L+S FTP+ V+F SL+ G C I EA LF +L+ P V TYNTLI+GL G+
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406
Query: 139 IVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
AL L +EM NG F + G+V A+ F +M + + PD Y +
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKL-GYVSMARGFFNEMLSKGLKPDRFAYNT 465
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
I G D + A + EM+ G P+V+T+NV + LC+ G +EA LL+ M+ G
Sbjct: 466 RIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDG 525
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
+ P+ Y ++++GF G + +A+E+F M S G +V +Y++LI+ + + ++ A
Sbjct: 526 LIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAF 585
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
+ +ML K + +V+ YN + L +++ A+K FDEM+ G+ + ++Y I+
Sbjct: 586 MYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINES 645
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
C Y EA+ L+R + K + D ++ + L
Sbjct: 646 CNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNL 680
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 185/398 (46%), Gaps = 14/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + N + L +++ + G+ P + TYN +++ +CK GRV +
Sbjct: 178 PDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALEL 237
Query: 75 LGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
L + R C+ PN VT+ L+ GL + + +A L ++ G + +TYN LING
Sbjct: 238 LSEMQERGCY-PNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFC 296
Query: 134 RTGHTIVALNLFEEMASGNG----------EFGVEGFVD--KAKELFLQMKDENINPDVV 181
+ G + A +L EEM + +G+ +V + F M PD+V
Sbjct: 297 QKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIV 356
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
++ S++ G+C +EA L E+ + + P V+T+N ++ LC G +D A RL M
Sbjct: 357 SFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEM 416
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
G+ P+ F Y L++G G V+ A+ F M S G F+Y+ I G K +
Sbjct: 417 TDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADT 476
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A S+ EML+ G PDV+ YN L + E A L + M DG+ D TY +
Sbjct: 477 SVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSI 536
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I+G KN ++ +A E+F + + Y LI
Sbjct: 537 INGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHA 574
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 173/376 (46%), Gaps = 14/376 (3%)
Query: 37 LSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 96
L +F ++ GL PD+ N ++ +S V G + + P VT+ +++
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG----- 151
C E R+ +A L ++++ GC PN TYN L+NGL + G A L EEM +
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284
Query: 152 --------NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
NG F +G +A +L +M + P + TY +++ G C +
Sbjct: 285 AYTYNPLING-FCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRF 343
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
+M+ P++V+FN ++ C+ G + EA L D + + P YNTL+ G C+
Sbjct: 344 SDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMW 403
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
G ++ A L M G +F+Y+IL+NG K + A + EMLSKG+KPD Y
Sbjct: 404 GYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAY 463
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
NT V +I AF + +EM G D TY F+ LC+ EA +L +
Sbjct: 464 NTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVS 523
Query: 384 LKCELDIRAYNCLIDG 399
D Y +I+G
Sbjct: 524 DGLIPDHVTYTSIING 539
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 160/340 (47%), Gaps = 30/340 (8%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +FD L R P V ++N L L + D L L K + GLFPD++TY IL+N
Sbjct: 375 FLLFDE-LKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVN 433
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT---KLRVFG 117
K+G VS +L P+ + + I G E +I + + F+ ++ G
Sbjct: 434 GCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVG---EMKIADTSVAFSMQEEMLAAG 490
Query: 118 CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENIN 177
P+V TYN ++ L + G+ A +L E M S +G +
Sbjct: 491 FPPDVITYNVFVHALCQQGNFEEACDLLENMVS-------DGLI---------------- 527
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
PD VTYTS+I GF +A+ + EM+ +GV P+VVT+ V++ +D A
Sbjct: 528 PDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMY 587
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
M++ V N YN +++G C+T R++ A + F ME G FSY+ILIN C
Sbjct: 588 FSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCN 647
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
E AL LY EML + I+PD ++ L +QV
Sbjct: 648 MGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVH 687
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 115/234 (49%)
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
+F +M + PDV ++R N ++AK + M G++P VVT+N ++D C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
K G++D+A LL M + G PN YN L++G G + +AK L M + G + +
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+Y+ LING+C+ A L EM+++ P + YNTL L + QV F +M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ D ++ + + G C+ I EA LF L+ + YN LI GL
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGL 400
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 108/230 (46%), Gaps = 24/230 (10%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP V ++N+ L + +++ L + + S GL PD TY +IN F K G +
Sbjct: 492 PPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKARE 551
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
V +L P+ VT+T LI A+ + A F+K+ NV TYN +INGL
Sbjct: 552 VFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLC 611
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
T +D+A + F +M+++ I P+ +YT +I C
Sbjct: 612 MTRR-----------------------MDEAYKYFDEMEEKGILPNKFSYTILINESCNM 648
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
W EA L EM+D+ +QP+ T +V + L ++ ++ A + ++ +IQ
Sbjct: 649 GYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQV-HAVQCVESLIQ 697
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 15/164 (9%)
Query: 240 LMIQIGVRPNAFVYNTLMD---GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+M Q + + FV+ ++D G L E VS E G +LI G+
Sbjct: 109 VMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVV------DVLIAGHV 162
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
L ++ +M+ G+ PDV N + VL + + + +A ++ M++ G+
Sbjct: 163 X------CLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVV 216
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY T +D CK + +A+EL ++ C + YN L++GL
Sbjct: 217 TYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGL 260
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 188/373 (50%), Gaps = 12/373 (3%)
Query: 39 LFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 98
LF + G+ PD+ TYN LI + K+ + + +L I + T NA +++ GLC
Sbjct: 394 LFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLC 453
Query: 99 AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE---- 154
+ A LF ++ +G +PN+ Y T++ GL + G A+ + M
Sbjct: 454 HCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVF 513
Query: 155 --------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
F G +++ K ++M + + P+V TY + I G+C A + A+ IEM
Sbjct: 514 CYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEM 573
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+D G+ PN V ++D CK+G +A M+ GV P+ ++ L+ G G++
Sbjct: 574 LDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKL 633
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
A +F + G VF+Y+ LI+ CK +++ A L+ +M KGI P++V YN L
Sbjct: 634 QEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNAL 693
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
L ++ ++ +A +LFD + G+A ++ TY T I G CK++ + EA +LF ++++
Sbjct: 694 INGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGV 753
Query: 387 ELDIRAYNCLIDG 399
D Y LIDG
Sbjct: 754 PPDSFVYCALIDG 766
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 182/386 (47%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +++++ L + D L L + + + GL PD Y Y LI+ FC+ R + G +
Sbjct: 265 PNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSM 324
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P+ V +T+LI G +S I A + ++ + N FTY LI+GL +
Sbjct: 325 LDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCK 384
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G ++KA++LF +M I PD+ TY +I G+
Sbjct: 385 IGD-----------------------LEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQ 421
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ +A LLIE+ + + N I++ LC G + A+ L MI G++PN +Y
Sbjct: 422 NMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYT 481
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
T++ G GR A ++ M+ G + VF Y+ +I G+CK ++E S EM++K
Sbjct: 482 TIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAK 541
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+KP+V Y +++ A + F EM G+A + IDG CK+ +A
Sbjct: 542 GLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKA 601
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
FR + D++ ++ LI GL
Sbjct: 602 FAKFRCMLDQGVLPDVQTHSVLIHGL 627
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 188/404 (46%), Gaps = 13/404 (3%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ M P + ++N L K ++ + L + L + Y ++N C G
Sbjct: 398 MTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGD 457
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
++ + ++ PN V +T+++KGL E R EA + ++ G P+VF YNT
Sbjct: 458 LTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNT 517
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDEN 175
+I G + G + EM + + V G + A+ F++M D
Sbjct: 518 VIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSG 577
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
I P+ V T +I G+C + +A M+DQGV P+V T +V++ L KNGK+ EA
Sbjct: 578 IAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAM 637
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+ ++ G+ P+ F Y +L+ C G + A EL M G + +Y+ LING
Sbjct: 638 GVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGL 697
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
CK EI A L+ + KG+ + V Y+T+ + + AF+LF M+ GV D+
Sbjct: 698 CKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDS 757
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ Y IDG CK +A+ LF + + + A+N LIDG
Sbjct: 758 FVYCALIDGCCKAGNTEKALSLFLGM-VEEGIASTPAFNALIDG 800
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 191/387 (49%), Gaps = 14/387 (3%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F ML+ +P V +++ G K+ + + F+ + G+ PD+ T+++LI+
Sbjct: 570 FIEMLDSGIAPNDVICTDLIDG-YCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLS 628
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K G++ V +L P+ T+TSLI LC E + A L + G PN+
Sbjct: 629 KNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIV 688
Query: 124 TYNTLINGLYRTGHTIVALNLFEE-----MASGNGEFG--VEGFVDKAK-----ELFLQM 171
TYN LINGL + G A LF+ +A + + + G+ A +LF M
Sbjct: 689 TYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGM 748
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
K + PD Y ++I G C A + +A L + M+++G+ + FN ++D K GK+
Sbjct: 749 KLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKL 807
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA +L++ M+ + PN Y L++ C G + A++LF+ M+ V +Y+ L
Sbjct: 808 IEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSL 867
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
++GY + SL+ EM+++GIKPD + ++ + + +A KL D+M +GV
Sbjct: 868 LHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGV 927
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELF 378
Y ID LCK++ + E +++
Sbjct: 928 NVCKNLYTILIDALCKHNNLSEVLKVL 954
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 163/345 (47%), Gaps = 11/345 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L L K L + G+ P++ TYN LIN CK+G ++ +
Sbjct: 650 PDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKAREL 709
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
I N+VT++++I G C + + EA LF +++ G P+ F Y LI+G +
Sbjct: 710 FDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCK 769
Query: 135 TGHTIVALNLF----EEMASGNGEFG--VEGFVD-----KAKELFLQMKDENINPDVVTY 183
G+T AL+LF EE + F ++GF +A +L M D +I P+ VTY
Sbjct: 770 AGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTY 829
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
T +I C + EA+ L +EM + V PNV+T+ ++ + G+ E L D M+
Sbjct: 830 TILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVA 889
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G++P+ ++ ++D G +A +L M S G Y+ILI+ CK+ +
Sbjct: 890 RGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSE 949
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
L + E+ +G K + TL + + A ++ + M R
Sbjct: 950 VLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMVR 994
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 166/364 (45%), Gaps = 21/364 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + ++L L+KN + +F L GL PD++TY LI+ CK G + F +
Sbjct: 615 PDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFEL 674
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + PN VT+ +LI GLC I +A LF + G N TY+T+I G +
Sbjct: 675 HDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCK 734
Query: 135 TGHTIVALNLFEEMASGNGEFGV----------------EGFVDKAKELFLQMKDENINP 178
+ + A LF M GV G +KA LFL M +E I
Sbjct: 735 SANLTEAFQLFHGMKL----VGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI-A 789
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
+ ++I GF EA L+ +M+D + PN VT+ ++++ C G + EA +L
Sbjct: 790 STPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLF 849
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
M + V PN Y +L+ G+ GR + LF M + G ++S++++ + K
Sbjct: 850 MEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKE 909
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
AL L +MLS+G+ +Y L L + + + K+ DE+++ G T
Sbjct: 910 GNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATC 969
Query: 359 RTFI 362
T +
Sbjct: 970 GTLV 973
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 175/373 (46%), Gaps = 30/373 (8%)
Query: 31 KHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTF 90
K D+++ +K +N + + + ILI+ + K G ++ V + F
Sbjct: 142 KILDSIIKCYKEINGSSSSSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACC 201
Query: 91 TSLIKGLCAESRIMEAAALFTKL---RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
SL K L +R+ LF K+ + P+V+TY LIN R G
Sbjct: 202 NSLSKDLLKGNRV----ELFWKVYKGMLGAIVPDVYTYTNLINAYCRVGK---------- 247
Query: 148 MASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
V++ K + M+++ P++VTY+ VI G C A D +EA L M
Sbjct: 248 -------------VEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMA 294
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
++G+ P+ + ++D C+ + E +LD M +G++P+ Y L++GF +
Sbjct: 295 NKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIG 354
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A ++ M + F+Y LI+G CK ++E A L+ EM GIKPD+ YN L
Sbjct: 355 GAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLI 414
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
+++ +E+A++L E++++ + A+ + ++GLC + A ELF+ + +
Sbjct: 415 EGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLK 474
Query: 388 LDIRAYNCLIDGL 400
+I Y ++ GL
Sbjct: 475 PNIVIYTTIVKGL 487
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 190/398 (47%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+N + L K + V L + + G P++ T+N LI C+ G V
Sbjct: 223 PDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQV 282
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ TP+ + +++ G+C E + A + ++ +G +PNV YNT++ GL
Sbjct: 283 LAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCS 342
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
A L EM + F G V + EL QM + PDV+T
Sbjct: 343 AERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVIT 402
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+VI GFC +EA LL M G +PN +++ +++ LC + +A L+ MI
Sbjct: 403 YTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMI 462
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G PN +NT+++ C G V +A EL M GC+ + SYS +I+G K + +
Sbjct: 463 EQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTD 522
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL L M++KG+ P+ +IY+++ L + ++ R ++FD +Q + +D Y I
Sbjct: 523 EALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVI 582
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LCK A+E + C + Y LI GL
Sbjct: 583 SSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGL 620
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 187/366 (51%), Gaps = 20/366 (5%)
Query: 33 YDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCF--TPNAVTF 90
+ + + + + L+ G D+ N+++N C G + L R L + F P+ V++
Sbjct: 169 FRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSY 228
Query: 91 TSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI-----NGLYRTGHTIVA---- 141
+++KGLC R L ++ GC PNV T+NTLI NGL+ H ++A
Sbjct: 229 NAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVD 288
Query: 142 ------LNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
+ ++ + G + EG ++ A E+ +M + P+VV Y +V++G C A
Sbjct: 289 HGCTPDIRMYATVLDGVCK---EGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAER 345
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W +A+ LL EM D + VTFN+++D C+NG + LL+ M++ G P+ Y T
Sbjct: 346 WEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTT 405
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
+++GFC G ++ A L SM + GC SY+I++ G C + A L +M+ +G
Sbjct: 406 VINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQG 465
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
P+ V +NT+ L + VE+A +L +M +G + D +Y T IDGL K EA+
Sbjct: 466 CSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEAL 525
Query: 376 ELFRTL 381
EL +
Sbjct: 526 ELLNVM 531
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 181/381 (47%), Gaps = 14/381 (3%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP V +FN L G L +N ++ V + ++ G PD+ Y +++ CK G +
Sbjct: 257 PPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHE 316
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L R+ PN V + +++KGLC+ R +A L ++ C + T+N L++
Sbjct: 317 ILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFC 376
Query: 134 RTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDV 180
+ G + L E+M NG F EG +D+A L M P+
Sbjct: 377 QNGLVYRVIELLEQMLEHGCVPDVITYTTVING-FCKEGLIDEAVMLLKSMAACGCRPNT 435
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
++YT V++G C A W +A+ L+ +M++QG PN VTFN +++ LCK G +++A LL
Sbjct: 436 ISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQ 495
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M+ G P+ Y+T++DG G+ + A EL M + G + YS + + K
Sbjct: 496 MLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGR 555
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
I + ++ + I+ D V+YN + L + +RA + M G + TY
Sbjct: 556 INRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTI 615
Query: 361 FIDGLCKNSYIVEAVELFRTL 381
I GL ++ EA E+ L
Sbjct: 616 LIRGLASEGFVKEAQEMLTEL 636
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 171/363 (47%), Gaps = 20/363 (5%)
Query: 55 YNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLR 114
YN +++ +C+ G+++ + + PNA T+ +++ LCA RI +A ++ ++R
Sbjct: 86 YNAMVSGYCRAGQLASARRLAASVP---VPPNAYTYFPVVRALCARGRIADALSVLDEMR 142
Query: 115 VFGCEPNVFTYNTLING--------LYRTGHTIV--------ALNLFEEMASGNGEFGVE 158
GC P Y+ ++ +R+ ++ AL++ N
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202
Query: 159 GFVDKAKELFLQMKDE-NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
G VD+A L + +PDVV+Y +V++G C A W + L+ EM+ G PNVVT
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
FN ++ LC+NG + ++L M+ G P+ +Y T++DG C G + A E+ M
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
S G V Y+ ++ G C + E A L EM D V +N L + V
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVY 382
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
R +L ++M G D TY T I+G CK I EAV L +++ C + +Y ++
Sbjct: 383 RVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVL 442
Query: 398 DGL 400
GL
Sbjct: 443 KGL 445
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 131/280 (46%), Gaps = 12/280 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+FNIL +N V+ L +++ G PD+ TY +IN FCK G + ++L +
Sbjct: 367 TFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSM 426
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PN +++T ++KGLC+ R ++A L +++ GC PN T+NT+IN L + G
Sbjct: 427 AACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLV 486
Query: 139 IVALNLFEEM------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
A+ L ++M ++ G G D+A EL M ++ ++P+ + Y+S+
Sbjct: 487 EQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSI 546
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
N + + D ++ + V +N ++ LCK G D A L M+ G
Sbjct: 547 ASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGC 606
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
PN Y L+ G G V A+E+ + S G F
Sbjct: 607 MPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHF 646
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 143/358 (39%), Gaps = 48/358 (13%)
Query: 90 FTSLIKGLCAESRIM----------------------------EAAALFTKLRVFGC--- 118
++LI+ LCA R A L + R+
Sbjct: 52 LSALIRSLCAAGRTAEAARALSAAAARGGAGVVAYNAMVSGYCRAGQLASARRLAASVPV 111
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEM-ASGNGEFG------VEGFVDK-------- 163
PN +TY ++ L G AL++ +EM G +E +
Sbjct: 112 PPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRS 171
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFC-YANDWNEAKCLLIEMMDQ-GVQPNVVTFNVI 221
A + + DV V+ C +EA LL ++ G P+VV++N +
Sbjct: 172 AVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAV 231
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
+ LC + L++ M+++G PN +NTL+ C G R ++ M GC
Sbjct: 232 LKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGC 291
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
T + Y+ +++G CK +E A + M S G+KP+VV YNT+ L + E+A +
Sbjct: 292 TPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEE 351
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
L EM + D T+ +D C+N + +EL + C D+ Y +I+G
Sbjct: 352 LLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVING 409
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 208/419 (49%), Gaps = 58/419 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +++ L L K + + V+ L K + GL P++YT+ I I + G++ + +
Sbjct: 225 PSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEI 284
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R+ P+ VT+T LI LC ++ A LF K++ G +P+ Y TL++
Sbjct: 285 FRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLD---- 340
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+F G +D KE + QM+ + PDVVT+T ++ C A
Sbjct: 341 -------------------KFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKAR 381
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
D++EA M QG+ PN+ T+N ++ L + G++++A +LLD M +GV+P A+ Y
Sbjct: 382 DFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYI 441
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMG-------CTHTVFS-------------------- 287
T +D F +G +A E F M++ G C +++S
Sbjct: 442 TFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLREN 501
Query: 288 --------YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
Y++++ Y K +++ A++L EM+ G +PDV++ N+L L++ +V+ A
Sbjct: 502 GLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEA 561
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
+++FD M+ ++ TY T + GL K + +A+ELF ++ KC + ++N L+D
Sbjct: 562 WQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLD 620
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 181/358 (50%), Gaps = 13/358 (3%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
DT + ++ + G PD+ T+ IL++ CK F + + PN T+ +L
Sbjct: 349 DTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTL 408
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN- 152
I GL RI +A L + G +P +TY T I+ ++G T A+ FE+M +
Sbjct: 409 ICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGI 468
Query: 153 -----------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
G + +AK +F +++ + PD VTY +++ + +EA
Sbjct: 469 VPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVN 528
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
LL EM+ G +P+V+ N ++D L K G++DEA ++ D M + + P YNTL+ G
Sbjct: 529 LLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLG 588
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
GRV +A ELF SM C+ S++ L++ +CKN E+E AL ++ +M KPDV+
Sbjct: 589 KEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVL 648
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
YNT+ L + ++V AF F ++++ + D T T + GL K I +A+ + R
Sbjct: 649 TYNTVIYGLIKENKVNHAFWFFHQLKK-SMHPDHVTICTLLPGLVKCGQIGDAISIAR 705
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 190/415 (45%), Gaps = 47/415 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG--- 71
P V +F I L + D +F+R++ G PDL TY +LI+ C G++ +
Sbjct: 260 PNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKEL 319
Query: 72 FVVL--------------------------------GRILRSCFTPNAVTFTSLIKGLCA 99
FV + ++ + P+ VTFT L+ LC
Sbjct: 320 FVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCK 379
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE----- 154
EA A F +R G PN+ TYNTLI GL R G AL L + M S +
Sbjct: 380 ARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYT 439
Query: 155 -------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
FG G KA E F +MK + I P++V + + EAK + +
Sbjct: 440 YITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLR 499
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+ G+ P+ VT+N++M K G++DEA LL MI+ G P+ V N+L+D GRV+
Sbjct: 500 ENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVD 559
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A ++F M+ M + TV +Y+ L++G K ++ A+ L+ M+ K P+ + +NTL
Sbjct: 560 EAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLL 619
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
+ +VE A K+F +M D TY T I GL K + + A F L+
Sbjct: 620 DCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK 674
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 183/390 (46%), Gaps = 12/390 (3%)
Query: 23 LFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSC 82
+F L+ + ++ ++ G + Y+YN LI+ + G V R++
Sbjct: 163 IFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEG 222
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
P+ T+++L+ L + L ++ G PNV+T+ I L R G A
Sbjct: 223 LKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAY 282
Query: 143 NLFEEM-ASGNGEFGV-----------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
+F M G G V G ++ AKELF++MK PD V Y +++ F
Sbjct: 283 EIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKF 342
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
D + K +M G P+VVTF +++D LCK DEA D+M + G+ PN
Sbjct: 343 NDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNL 402
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
YNTL+ G GR+ A +L +MES+G T ++Y I+ + K+ E A+ + +
Sbjct: 403 HTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEK 462
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M +KGI P++V N L E+ ++ A +F+ ++ +G+A D+ TY + K
Sbjct: 463 MKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQ 522
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ EAV L + CE D+ N LID L
Sbjct: 523 VDEAVNLLSEMIRNGCEPDVIVVNSLIDSL 552
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 168/339 (49%), Gaps = 14/339 (4%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ IFD P + S+N L G L + + + LFK + + G PD +T+N+L+
Sbjct: 772 YQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLA 831
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
K G+++ F + ++ P+A+T+ +I L + + +A F L P
Sbjct: 832 VHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRP 891
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKEL 167
TY LI+GL + G A+ LFEEM+ NG +G G + A +L
Sbjct: 892 TPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILING-YGKIGDTETACQL 950
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
F +M +E I PD+ +YT ++ C A +EA E+ G+ P+ + +N I++ L K
Sbjct: 951 FKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGK 1010
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
+ +M+EA L + M G+ P+ + YN+LM L G V +AK ++ ++ G VF+
Sbjct: 1011 SQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFT 1070
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
Y+ LI GY ++ E A ++Y M+ G P++ Y L
Sbjct: 1071 YNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 164/352 (46%), Gaps = 13/352 (3%)
Query: 58 LINCFCKMGRVSHGFVVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF 116
L+ CK R + + + + + +P ++ LI L +A LF ++
Sbjct: 758 LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817
Query: 117 GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKA 164
GC P+ FT+N L+ ++G L++EM S +DKA
Sbjct: 818 GCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKA 877
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
+ F + + P TY +I G EA L EM D G +PN FN++++
Sbjct: 878 LDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILING 937
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
K G + A +L M+ G+RP+ Y L+D CL GRV+ A F ++S G
Sbjct: 938 YGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPD 997
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
+Y+ +ING K++ +E AL+LY EM ++GI PD+ YN+L + L VE+A ++++
Sbjct: 998 FIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYE 1057
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
E+Q G+ D +TY I G + A +++ + + C +I Y L
Sbjct: 1058 ELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 157/320 (49%), Gaps = 13/320 (4%)
Query: 93 LIKGLCAESRIMEAAALFTKL-RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG 151
L++ LC R + A +F K + G P + +YN LI L +T A +LF++M +
Sbjct: 758 LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817
Query: 152 N------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
G G + + EL+ +M PD +TY VI +N+ ++A
Sbjct: 818 GCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKA 877
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
+++ +P T+ ++D L K G+++EA RL + M G +PN ++N L++G
Sbjct: 878 LDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILING 937
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
+ G A +LF M + G + SY+IL++ C ++ AL + E+ S G+ PD
Sbjct: 938 YGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPD 997
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
+ YN + L + ++E A L++EM+ G+ D +TY + + L + +A ++
Sbjct: 998 FIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYE 1057
Query: 380 TLRILKCELDIRAYNCLIDG 399
L++ E D+ YN LI G
Sbjct: 1058 ELQLAGLEPDVFTYNALIRG 1077
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 139/291 (47%), Gaps = 12/291 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FN+L K+ + L+K + S PD TYNI+I+ K +
Sbjct: 821 PDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDF 880
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ S F P T+ LI GL R+ EA LF ++ +GC+PN +N LING +
Sbjct: 881 FYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGK 940
Query: 135 TGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKDENINPDVVT 182
G T A LF+ M + ++ G VD+A F ++K ++PD +
Sbjct: 941 IGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIA 1000
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I G + EA L EM ++G+ P++ T+N +M L G +++A R+ + +
Sbjct: 1001 YNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQ 1060
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
G+ P+ F YN L+ G+ L+ A ++ +M GC + +Y+ L N
Sbjct: 1061 LAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPN 1111
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 195/450 (43%), Gaps = 57/450 (12%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M +M+ SP V ++N L L K + LF+ + P+ ++N L++CF
Sbjct: 564 MFDRMKDMKLSPT-VVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCF 622
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK V + ++ P+ +T+ ++I GL E+++ A F +L+ P+
Sbjct: 623 CKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKK-SMHPDH 681
Query: 123 FTYNTLINGLYRTGHTIVALNL----------------FEEMASGNGEFGVEGFVDKA-- 164
T TL+ GL + G A+++ +E++ G VE +DKA
Sbjct: 682 VTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTL---VEAEMDKAII 738
Query: 165 --KELFLQ--------------------------------MKDENINPDVVTYTSVIRGF 190
+EL L K I+P + +Y +I
Sbjct: 739 FAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGEL 798
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
+ +A L +M + G P+ TFN+++ K+GK+ E L MI +P+A
Sbjct: 799 LEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDA 858
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
YN ++ + +++A + F + S T +Y LI+G K +E A+ L+ E
Sbjct: 859 ITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEE 918
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M G KP+ I+N L +I E A +LF M +G+ D +Y +D LC
Sbjct: 919 MSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGR 978
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ EA+ F L+ + D AYN +I+GL
Sbjct: 979 VDEALYYFNELKSTGLDPDFIAYNRIINGL 1008
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 1/210 (0%)
Query: 190 FCYANDWNEAKCLLIEMMDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
F +D E + E M + + + ++ T+ I L G + + + +L+ M + G
Sbjct: 131 FLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVL 190
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
NA+ YN L+ +G A E++ M S G ++ +YS L+ K ++ E + L
Sbjct: 191 NAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLL 250
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
EM G++P+V + VL +++ A+++F M +G D TY ID LC
Sbjct: 251 KEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNA 310
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLID 398
+ A ELF ++ + D Y L+D
Sbjct: 311 GQLENAKELFVKMKANGHKPDQVIYITLLD 340
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%)
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
T N +++ L + K+++ + + + M + +R + Y T+ + G + + + M
Sbjct: 124 TCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKM 183
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
G +SY+ LI+ ++ AL +Y M+S+G+KP + Y+ L V L +
Sbjct: 184 RKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDS 243
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
E L EM+ G+ + +T+ I L + I EA E+FR + C D+ Y L
Sbjct: 244 EMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVL 303
Query: 397 IDGL 400
ID L
Sbjct: 304 IDAL 307
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/378 (31%), Positives = 194/378 (51%), Gaps = 14/378 (3%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 95
LSL + + G P + TYN I CK+GR+S L +L + P+ V++ +LI
Sbjct: 323 ALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIY 382
Query: 96 GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG---- 151
G C +M+A LF +LR P + TYNTL++GL R G VA L EM +
Sbjct: 383 GYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAP 442
Query: 152 ---------NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
NG + G + A+E F +M E + D Y + I G D + A L
Sbjct: 443 DIVTYTILVNGSCKM-GSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSL 501
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
EM+ +G P+++ +NV++D LCK G ++EAS LL M+ GV P+ Y +++
Sbjct: 502 QEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLE 561
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
GR+ + +E+F M S G T +V +Y++LI+G+ +E A + EM KGI P+V+
Sbjct: 562 NGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVIT 621
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
YN+L L ++ ++++A+ F EM G+ + ++Y I+ C EA+ L++ +
Sbjct: 622 YNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQML 681
Query: 383 ILKCELDIRAYNCLIDGL 400
+ D ++ L+ L
Sbjct: 682 DRGVQPDSCTHSALLKQL 699
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 122/411 (29%), Positives = 196/411 (47%), Gaps = 13/411 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+FD M+ R SP V + N + L + +++ + G+ P + TYN L++
Sbjct: 184 LSVFDKMIKSRLSPD-VKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLD 242
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+CK G+V G +L + R PN VT+ LI GL + +A L ++ G +
Sbjct: 243 SYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKV 302
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELF 168
+ +TYN LI G + G AL+L EEM V G + A +
Sbjct: 303 SAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQL 362
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
M N+ PDVV+Y ++I G+C + +A L E+ + P +VT+N ++D LC+
Sbjct: 363 SDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQ 422
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G+++ A +L MI G+ P+ Y L++G C G ++ A+E F M G ++Y
Sbjct: 423 GELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAY 482
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ I G K + A SL EML+KG PD++IYN + L ++ +E A +L +M
Sbjct: 483 ATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVS 542
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
DGV D TY + I +N + + E+F + + Y LI G
Sbjct: 543 DGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHG 593
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 157/328 (47%), Gaps = 12/328 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+N L + + LF L S LFP + TYN L++ C+ G + +
Sbjct: 372 PDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQL 431
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ P+ VT+T L+ G C + A F ++ G E + + Y T I G +
Sbjct: 432 KVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELK 491
Query: 135 TGHTIVALNLFEEMASGN-------GEFGVEGF-----VDKAKELFLQMKDENINPDVVT 182
G T A +L EEM + V+G +++A EL +M + + PD VT
Sbjct: 492 LGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVT 551
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YTS+I + + + EM+ +G+ P+VVT+ V++ G+++ A M
Sbjct: 552 YTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQ 611
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ PN YN+L++G C R+++A F M G +SY+ILIN C +
Sbjct: 612 EKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQ 671
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVL 330
ALSLY +ML +G++PD ++ L L
Sbjct: 672 EALSLYKQMLDRGVQPDSCTHSALLKQL 699
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 122/246 (49%)
Query: 155 FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
+ + V++ +F +M ++PDV ++R + ++A + M + G++P
Sbjct: 174 YSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPT 233
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
+VT+N ++D CK GK+ + LL M + G PN YN L++G G +AK L
Sbjct: 234 IVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIG 293
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
M G + ++Y+ LI GY + ALSL EM+ KG P V YN+ L ++
Sbjct: 294 EMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLG 353
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
++ A + +M + + D +Y T I G C+ +++A LF LR + I YN
Sbjct: 354 RMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYN 413
Query: 395 CLIDGL 400
L+DGL
Sbjct: 414 TLLDGL 419
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 14/172 (8%)
Query: 243 QIGVRPNAFVY----------NTLMDGFCLTGRV-NRAKELFVSMESMGCTHTVFSYSIL 291
Q G R + FV+ N + + + RV N V + GC + S IL
Sbjct: 108 QPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKIL 167
Query: 292 ---INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
I Y K +E LS++ +M+ + PDV N + +L + + +A +++ M
Sbjct: 168 DLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGE 227
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G+ TY T +D CK + + ++L ++ C + YN LI+GL
Sbjct: 228 FGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGL 279
>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
Length = 845
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/472 (27%), Positives = 219/472 (46%), Gaps = 86/472 (18%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + N + L K K D S+ +++ +G+ PDL+TY+++I+ CK + V
Sbjct: 243 PKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERV 302
Query: 75 LGRILRSCFTPNAVTFTSL-----IKGLCAES---------------------------- 101
L +++ + PN++T+ SL I G+ ES
Sbjct: 303 LEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFK 362
Query: 102 --RIMEAAALFTKLRVFGCEPNVFTYNT--------LINGLYRTGHTIVALNLFEEMASG 151
R EA +F + + G +P++ +Y+T + ++ H I L L + +A
Sbjct: 363 HGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPN 422
Query: 152 NGEFGVE-------GFVDKAKELFLQMKDENINPDVVTYTSVI----------------- 187
F + G +DKA +F M+++ + PD VT+ +VI
Sbjct: 423 KHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFN 482
Query: 188 ------------------RGFCYANDWNEAKCLLIEMMDQGVQP-NVVTFNVIMDELCKN 228
+G C + +AK L+ EMM++ + P V F+ I++ LCK
Sbjct: 483 HMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKE 542
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G++ E ++D+M+Q G RPN +N+LM+G+CL G + A L +M S+G + Y
Sbjct: 543 GRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIY 602
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
L++GYCKN I+ AL+++ +ML KG+KP V+Y+ + LF+ + A K+F EM
Sbjct: 603 GTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIE 662
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G TY + GLC+N+ EA L L + + DI +N +I +
Sbjct: 663 SGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 714
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 196/415 (47%), Gaps = 23/415 (5%)
Query: 2 CIFDYMLNMRPSPPPVC-SFNILFGCLAKNKHYDTVL-----SLFKRLNSTGLFPDLYTY 55
CIFD M+ P P + S N + C Y TV+ ++F + + G+ P+ + +
Sbjct: 371 CIFDSMVLKGPKPDIISYSTNASWVCY----WYVTVVWVMWHNIFNLMLTKGIAPNKHVF 426
Query: 56 NILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV 115
NILIN + + G + ++ + P+ VTF ++I LC R+ +A F +
Sbjct: 427 NILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVD 486
Query: 116 FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN-GEFGV------------EGFVD 162
G P+ Y LI G G + A L EM + + GV EG V
Sbjct: 487 IGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVA 546
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
+ K++ M P+VVT+ S++ G+C + EA LL M G++PN + ++
Sbjct: 547 EGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLV 606
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
D CKNG++D+A + M+ GV+P + +Y+ ++ G R AK++F M G T
Sbjct: 607 DGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTT 666
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
++ +Y +++ G C+N + A L ++ + +K D++ +N + +F++ + + A +L
Sbjct: 667 VSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKEL 726
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
FD + G+ + TY I L K EA LF ++ D R N ++
Sbjct: 727 FDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 781
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 198/456 (43%), Gaps = 85/456 (18%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTY--------------- 55
R SPP + ++NIL C + D L++ RL GL PD ++Y
Sbjct: 170 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKA 229
Query: 56 -------------------NILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 96
N +I CKM + ++ +++ S P+ T++ +I G
Sbjct: 230 HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 289
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG 156
LC + +A + ++ G PN TYN+LI+G +G ++ +F++M+S
Sbjct: 290 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 349
Query: 157 VE------------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND------WNE 198
V+ G ++AK +F M + PD+++Y++ CY W+
Sbjct: 350 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHN 409
Query: 199 ------------------------AKCLLI--------EMMDQGVQPNVVTFNVIMDELC 226
A+C ++ +M ++G+ P+ VTF ++ LC
Sbjct: 410 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 469
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
+ G++D+A + M+ IGV P+ VY L+ G C G + +AKEL M +
Sbjct: 470 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 529
Query: 287 SY-SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
Y S +IN CK + + M+ G +P+VV +N+L + +E AF L D
Sbjct: 530 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 589
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
M G+ + + Y T +DG CKN I +A+ +FR +
Sbjct: 590 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDM 625
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 187/401 (46%), Gaps = 38/401 (9%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDT-------VLSLFKRLNSTGLF----PDLYTYNILINC 61
+P P + N + LA+ + LFKR++ P ++TYNILI+C
Sbjct: 126 APVPARALNGILAALARAPPSAACGDAPALAIELFKRMDRWACPRHSPPTIHTYNILIDC 185
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
+ ++ R G ++GR+L++ P+ ++ SLI G + + +A LF ++ G P
Sbjct: 186 YRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPK 244
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
+ N++I L + +EM DKA+ + +M D I PD+
Sbjct: 245 ILICNSIIKELCK----------MKEM-------------DKAESIVQKMVDSGIAPDLF 281
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY+ +I G C + ++A+ +L +M++ G +PN +T+N ++ +G +E+ R+ M
Sbjct: 282 TYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM 341
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
GV P N+ + GR N AK +F SM G + SYS + C
Sbjct: 342 SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVT 401
Query: 302 EGAL---SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+ +++ ML+KGI P+ ++N L +++A +F++MQ G+ DT T+
Sbjct: 402 VVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTF 461
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
T I LC+ + +A+ F + + Y CLI G
Sbjct: 462 ATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQG 502
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 155/336 (46%), Gaps = 23/336 (6%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F++M+++ P ++ GC + + + +N P + ++ +IN C
Sbjct: 481 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC 540
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K GRV+ G ++ ++++ PN VTF SL++G C + EA AL + G EPN +
Sbjct: 541 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCY 600
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
Y TL++G + G +D A +F M + + P V Y
Sbjct: 601 IYGTLVDGYCKNGR-----------------------IDDALTVFRDMLHKGVKPTSVLY 637
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
+ ++ G A AK + EM++ G ++ T+ V++ LC+N DEA+ LL+ +
Sbjct: 638 SIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFA 697
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
+ V+ + +N ++ GR AKELF ++ + G + +YS++I K + E
Sbjct: 698 MNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEE 757
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
A +L+ + G D + N + +L +V +A
Sbjct: 758 ADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKA 793
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 171/408 (41%), Gaps = 60/408 (14%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF+ ML + P FNIL A+ D + +F+ + + G+ PD T+ +I+
Sbjct: 410 IFNLMLT-KGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSL 468
Query: 63 CKMGRV------------------------------SHGFVVLGRIL------RSCFTPN 86
C++GR+ +HG +V + L + P
Sbjct: 469 CRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPG 528
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
F+S+I LC E R+ E + + G PNV T+N+L+ G G+ A L +
Sbjct: 529 VKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLD 588
Query: 147 EMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
MAS G+E P+ Y +++ G+C ++A + +M
Sbjct: 589 AMAS----IGIE-------------------PNCYIYGTLVDGYCKNGRIDDALTVFRDM 625
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+ +GV+P V +++I+ L + + A ++ MI+ G + Y ++ G C
Sbjct: 626 LHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCT 685
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ A L + +M + +++I+I+ K + A L+ + + G+ P++ Y+ +
Sbjct: 686 DEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMM 745
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
L + E A LF +++ G A+D+ + L + + +A
Sbjct: 746 ITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKA 793
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 113/265 (42%), Gaps = 16/265 (6%)
Query: 15 PPVCSFNILFG--CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
P V +FN L CL N + +L + S G+ P+ Y Y L++ +CK GR+
Sbjct: 562 PNVVTFNSLMEGYCLVGN--MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDAL 619
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
V +L P +V ++ ++ GL R A +F ++ G ++ TY ++ GL
Sbjct: 620 TVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGL 679
Query: 133 YRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDV 180
R T A L E++ + N +F + G +AKELF + + P++
Sbjct: 680 CRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNI 739
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
TY+ +I + EA L I + G + N I+ L ++ +AS L +
Sbjct: 740 QTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSI 799
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGR 265
+ + + A + L F G+
Sbjct: 800 IGENNLTLEASTISLLASLFSREGK 824
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 202/402 (50%), Gaps = 16/402 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+ P SF L ++ + V +L + G D T +++ F
Sbjct: 171 VFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVF 230
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ GR + R+L PN V +T+ I GLC + + +A + ++ G +PNV
Sbjct: 231 CQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNV 290
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN-------------GEFGVEGFVDKAKELFL 169
+T+ +LINGL + G T A LF ++ + G + EG + +A+ L
Sbjct: 291 YTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLG 350
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M ++ + P+ TYT++I G C +N A L+ +M +G QPN+ T+N ++D LCK G
Sbjct: 351 RMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKG 410
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+ EA ++L + G++ + Y ++ C G + A +LF M GC + +Y+
Sbjct: 411 KIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYT 470
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
LI YC+ +++E + L+ + L+ + P Y ++ ++ + A ++F+ M ++
Sbjct: 471 TLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQN 530
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTL---RILKCEL 388
G AD+ TY I GLCK S + EA L+ + R++ CE+
Sbjct: 531 GCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEV 572
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 179/409 (43%), Gaps = 17/409 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F ML M +PP V ++ L K + + + + + GL P++YT+ LIN
Sbjct: 242 LFRRMLEM-GTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGL 300
Query: 63 CKMGRVSHGFVVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK+G F + ++++S + PN T+T +I G C E ++ A L ++ G PN
Sbjct: 301 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPN 360
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFL 169
TY TLI+G + G A L +M + + +G + +A ++
Sbjct: 361 TNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLR 420
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
++ + D VTYT +I C A L M + G P++ T+ ++ C+
Sbjct: 421 MANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQR 480
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+M+E+ +L D + I + P Y +++ G+C G+ A +F M GC +Y
Sbjct: 481 QMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYG 540
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
LI+G CK +E A +LY ML K + P V TL FE + E+A + R
Sbjct: 541 ALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTL---AFEYCRREKAVVAVSILDRL 597
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
T + L ++ +A + + +D AY I+
Sbjct: 598 DKRRKNHTVNVLVRKLSAIGHVEDASLFLKKALDVDLAVDRLAYTSFIN 646
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 159/382 (41%), Gaps = 36/382 (9%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F ++ P V ++ ++ G K L R+ GL P+ TY LI+
Sbjct: 310 FRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIS 369
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK G + F ++ ++ R F PN T+ +LI GLC + +I EA + G +
Sbjct: 370 GHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQL 429
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
+ TY +I + GH AL+LF MA + +PD+
Sbjct: 430 DKVTYTVMITEHCKQGHITYALDLFNRMA-----------------------ENGCHPDI 466
Query: 181 VTYTSVIRGFCYANDWNEA-----KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
TYT++I +C E+ KCL IE++ P T+ ++ CK GK A
Sbjct: 467 HTYTTLIARYCQQRQMEESQKLFDKCLAIELV-----PTKQTYTSMIAGYCKVGKSTSAL 521
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
R+ + M+Q G + ++ Y L+ G C R+ A+ L+ M + L Y
Sbjct: 522 RVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEY 581
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
C+ ++ A+S+ + L K K V N L L I VE A + +A D
Sbjct: 582 CRREKAVVAVSIL-DRLDKRRKNHTV--NVLVRKLSAIGHVEDASLFLKKALDVDLAVDR 638
Query: 356 WTYRTFIDGLCKNSYIVEAVEL 377
Y +FI+ N A E+
Sbjct: 639 LAYTSFINSCYANKKYALATEI 660
>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
Length = 586
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/333 (33%), Positives = 168/333 (50%), Gaps = 27/333 (8%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ + R P V SFN++ + + L L +R+N G PD T+NI+++
Sbjct: 240 LFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGL 299
Query: 63 CKMGRVSHGFVVLGRILRS--CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C+ VS G VL R+ R C PN VTFTS+I G C ++ +A A++ + G P
Sbjct: 300 CRTNEVSRGHEVLRRLQRDGVCM-PNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMP 358
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
N TYN LING +G G + A E++ QM PDV
Sbjct: 359 NTVTYNVLING-----------------------YGKVGDLGSAVEVYQQMTRLRCPPDV 395
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-D 239
VT++S+I G+C ++A + +M +QPNV TF++I+ LCK + DEA LL +
Sbjct: 396 VTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNE 455
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
L ++ + P AF+YN ++D C G+V+ A + ME GC ++Y+ILI GYC
Sbjct: 456 LNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKS 515
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
I A+ + EM+ G PD + N L +
Sbjct: 516 RISEAIMFFHEMVEAGCSPDSITVNCFISCLLK 548
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 177/370 (47%), Gaps = 26/370 (7%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRS-CFTPNAVTFTS 92
D +L + + G + Y YN L++ GRV + R ++ ++P+ +F
Sbjct: 200 DASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNV 259
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN 152
+IKG+C ++ +A L ++ FGC P+ T+N +++GL RT
Sbjct: 260 VIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNE--------------- 304
Query: 153 GEFGVEGFVDKAKELFLQMKDENI-NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
V + E+ +++ + + P+VVT+TSVI G+C A +A + +M+ G+
Sbjct: 305 --------VSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGI 356
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
PN VT+NV+++ K G + A + M ++ P+ +++L+DG+C G+++ A
Sbjct: 357 MPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALR 416
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM-LSKGIKPDVVIYNTLFVVL 330
++ M V+++SI+I+ CK + A+ L E+ L I P IYN + VL
Sbjct: 417 IWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVL 476
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
+ +V+ A + M+ G D +TY I G C S I EA+ F + C D
Sbjct: 477 CKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDS 536
Query: 391 RAYNCLIDGL 400
NC I L
Sbjct: 537 ITVNCFISCL 546
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 185/384 (48%), Gaps = 20/384 (5%)
Query: 35 TVLSLFKRLNSTGL--FPDLYTYNILINCFCKMGRVSHGFVVLGRILRS-CFTPNAVTFT 91
+ L++F L+ + L P ++ +I C+ GR + + ++ ++P+A F
Sbjct: 128 SALAVFTALHCSPLSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDA-RFL 186
Query: 92 SLIKGLCAESRIMEAAA-LFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS 150
S + C + +++A+A L +K FGC + YN L++ L G + LFE
Sbjct: 187 SFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQ 246
Query: 151 GN------GEFGVE-------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
F V G V KA EL +M + +PD VT+ ++ G C N+ +
Sbjct: 247 DRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVS 306
Query: 198 EAKCLLIEMMDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+L + GV PNVVTF ++ CK GK+++A + + M+ G+ PN YN L
Sbjct: 307 RGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVL 366
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
++G+ G + A E++ M + C V ++S LI+GYC+ +++ AL ++ +M I
Sbjct: 367 INGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRI 426
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ-RDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+P+V ++ + L + ++ + A L +E+ R +A + Y ID LCK + EA
Sbjct: 427 QPNVYTFSIIIHSLCKQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEAN 486
Query: 376 ELFRTLRILKCELDIRAYNCLIDG 399
+ + + C D Y LI G
Sbjct: 487 LIRKGMEEKGCRPDKYTYTILIIG 510
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 153/320 (47%), Gaps = 21/320 (6%)
Query: 98 CAESRIMEAAALFTKLRV--FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG-- 153
CA S A A+FT L P+ + +I L R+G AL LF++M + G
Sbjct: 125 CASS----ALAVFTALHCSPLSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYS 180
Query: 154 ------EFGVEG-----FVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
F V +D + L + + + Y ++ ++ L
Sbjct: 181 PDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVAL 240
Query: 203 LIE-MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
+ D+ P+V +FNV++ +C+ G++ +A L++ M + G P+ +N ++DG C
Sbjct: 241 FERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLC 300
Query: 262 LTGRVNRAKELFVSMESMG-CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
T V+R E+ ++ G C V +++ +I+GYCK ++E A+++Y +M++ GI P+
Sbjct: 301 RTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNT 360
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
V YN L ++ + A +++ +M R D T+ + IDG C+ + +A+ ++
Sbjct: 361 VTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSD 420
Query: 381 LRILKCELDIRAYNCLIDGL 400
+ + + ++ ++ +I L
Sbjct: 421 MAQHRIQPNVYTFSIIIHSL 440
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 118/240 (49%), Gaps = 15/240 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +F + K + ++++ + ++G+ P+ TYN+LIN + K+G + V
Sbjct: 323 PNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEV 382
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ R P+ VTF+SLI G C ++ +A +++ + +PNV+T++ +I+ L +
Sbjct: 383 YQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCK 442
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF--------------VDKAKELFLQMKDENINPDV 180
+ A+ L E+ + + + F VD+A + M+++ PD
Sbjct: 443 QNRSDEAICLLNEL-NLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDK 501
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
TYT +I G+C + +EA EM++ G P+ +T N + L K G +E ++ L
Sbjct: 502 YTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVMRL 561
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 195/404 (48%), Gaps = 13/404 (3%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P ++++L L + + ++ G+ P+++ Y LI + + R
Sbjct: 442 MKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESR 501
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+L ++ + P+ + LI GLC ++ EA L + G +PN TY
Sbjct: 502 YEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGA 561
Query: 128 LINGLYRTGHTIVALNLFEEMASGN-------GEFGVEGFVD-----KAKELFLQMKDEN 175
IN ++G VA F++M S ++G D +A F M ++
Sbjct: 562 FINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKG 621
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+ PD+ Y+++I EA + ++ + GV P+V +N ++ CK G +++AS
Sbjct: 622 LIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKAS 681
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+L D M+ G+ PN VYNTL++G C G V +A+ELF +E V +YS +I+GY
Sbjct: 682 QLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGY 741
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
CK+ + A L+ EM+SKGI PD IY L + +E+A LF E Q+ V + +
Sbjct: 742 CKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS 801
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + ID CK+ ++EA ELF + K +I Y LID
Sbjct: 802 -AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDA 844
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 126/429 (29%), Positives = 201/429 (46%), Gaps = 48/429 (11%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++N + G +AK +SLF + GL PD +TYN+LI+ + K ++ +L
Sbjct: 381 VVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLA 440
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ TP+ T++ LI GLC S + +A + ++ G +PNVF Y TLI +
Sbjct: 441 EMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQES 500
Query: 137 HTIVALNLFEEMASGN-------------------------------GEFGVE------- 158
+A+ L + M + GE G++
Sbjct: 501 RYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYG 560
Query: 159 ---------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
G + A+ F M I P+ V YT +I+G C + EA M+++
Sbjct: 561 AFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEK 620
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
G+ P++ ++ I+ L KNGK EA + ++ GV P+ F+YN+L+ GFC G + +A
Sbjct: 621 GLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKA 680
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
+L+ M G + Y+ LING CK E+ A L+ E+ K + PDVV Y+T+
Sbjct: 681 SQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDG 740
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
+ + AFKLFDEM G++ D + Y IDG K + +A+ LF + K
Sbjct: 741 YCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQ-QKSVGS 799
Query: 390 IRAYNCLID 398
+ A+N LID
Sbjct: 800 LSAFNSLID 808
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 192/382 (50%), Gaps = 30/382 (7%)
Query: 21 NILFGCLAKNKHYDT-----VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVL 75
N+++ L K H D LS FK + GL PD+ Y+ +I+ K G+ V
Sbjct: 591 NVIYTILIKG-HCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF 649
Query: 76 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRT 135
+ L++ P+ + SLI G C E I +A+ L+ ++ G PN+ YNTLINGL +
Sbjct: 650 LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKL 709
Query: 136 GHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
G V KA+ELF +++++++ PDVVTY+++I G+C + +
Sbjct: 710 GE-----------------------VTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGN 746
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
EA L EM+ +G+ P+ + +++D K G +++A L Q V + +N+
Sbjct: 747 LTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS-AFNS 805
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L+D FC G+V A+ELF M T + +Y+ILI+ Y K + +E A L+ +M ++
Sbjct: 806 LIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRN 865
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
I P+ + Y +L + +I + LF +M+ G+A D Y CK +EA+
Sbjct: 866 IIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEAL 925
Query: 376 ELFRTLRILKCELDIRAYNCLI 397
+L + +L+ ++ LI
Sbjct: 926 KLLNKSLVEGIKLEDDVFDALI 947
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 184/349 (52%), Gaps = 13/349 (3%)
Query: 38 SLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 97
S+F S G FP L N L+ K + + V G ++ + P+ T+T++IK
Sbjct: 193 SVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAH 252
Query: 98 CAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE-EMASGNGEFG 156
C +++ + +++ C+PN+FTYN I GL +TG AL + + M G G G
Sbjct: 253 CKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDG 311
Query: 157 ------VEGFVDK-----AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
V+GF + AK +F M +NP+ TYT++I GF + EA + E
Sbjct: 312 HTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDE 371
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M+ +G++ NVVT+N ++ + K G+M +A L + M+ G+ P+ + YN L+DG+ +
Sbjct: 372 MITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHD 431
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
+ +A EL M++ T + F+YS+LI+G C + +++ A + +M+ G+KP+V +Y T
Sbjct: 432 MAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGT 491
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
L + + E A +L M +GV D + Y I GLC+ + EA
Sbjct: 492 LIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEA 540
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 190/382 (49%), Gaps = 13/382 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +++ + L+KN + +F + TG+ PD++ YN LI+ FCK G + +
Sbjct: 624 PDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQL 683
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+L + PN V + +LI GLC + +A LF ++ P+V TY+T+I+G +
Sbjct: 684 YDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCK 743
Query: 135 TGHTIVALNLFEEMASG----NGEF--------GVEGFVDKAKELFLQMKDENINPDVVT 182
+G+ A LF+EM S +G G EG ++KA LF + + +++ +
Sbjct: 744 SGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSA 802
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ S+I FC EA+ L +M+D+ + PN+VT+ +++D K M+EA +L M
Sbjct: 803 FNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDME 862
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ PN Y +L+ + G + LF ME+ G +Y ++ + YCK +
Sbjct: 863 TRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSL 922
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL L + L +GIK + +++ L L + Q+ +L EM ++ ++ + T T +
Sbjct: 923 EALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLL 982
Query: 363 DGLCKNSYIVEAVELFRTLRIL 384
G K+ EA ++ ++ L
Sbjct: 983 LGFYKSGNEDEASKVLGVMQRL 1004
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 183/384 (47%), Gaps = 22/384 (5%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNST----GLFPDLYTYNILINCFCKMGRVS 69
P +C N++ L N ++ LF ++ + + PD+YTY +I CK+G V
Sbjct: 205 PTLICCNNLMRDLLKAN-----MMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVI 259
Query: 70 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
G +VL + + C PN T+ + I GLC + EA + + G P+ TY L+
Sbjct: 260 KGKMVLSEMEKEC-KPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLV 318
Query: 130 NGLYRTGHTIVALNLFEEMASGN---GEFG----VEGFVDKAK-ELFLQMKDENINP--- 178
+G + + A +FE M S F ++GF+ + E L++KDE I
Sbjct: 319 DGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLK 378
Query: 179 -DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
+VVTY ++I G A + +A L EM+ G++P+ T+N+++D K+ M +A L
Sbjct: 379 LNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACEL 438
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
L M + P+ F Y+ L+ G C + + +A E+ M G VF Y LI Y +
Sbjct: 439 LAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQ 498
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
E A+ L M++ G+ PD+ YN L + L +VE A L +M G+ + T
Sbjct: 499 ESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHT 558
Query: 358 YRTFIDGLCKNSYIVEAVELFRTL 381
Y FI+ K+ I A F+ +
Sbjct: 559 YGAFINLYSKSGEIQVAERYFKDM 582
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/355 (31%), Positives = 178/355 (50%), Gaps = 19/355 (5%)
Query: 52 LYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC----AESRIMEAA 107
L++Y+IL C G + +L ++L++ P + SL++ C S +
Sbjct: 120 LHSYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEI-LDSLVR--CYREFGGSNLTVFD 176
Query: 108 ALFTKLRVFG--CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAK 165
K RV G E + ++ G + T I NL ++ N + G K
Sbjct: 177 IFIDKFRVLGFLNEASSVFIASISEGFFPT--LICCNNLMRDLLKAN----MMGLFWK-- 228
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
++ M + I PDV TYT+VI+ C D + K +L EM ++ +PN+ T+N + L
Sbjct: 229 -VYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGL 286
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
C+ G +DEA + LM++ G+ P+ Y L+DGFC R AK +F SM S G
Sbjct: 287 CQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNR 346
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
F+Y+ LI+G+ K IE AL + EM+++G+K +VV YN + + + ++ +A LF+E
Sbjct: 347 FTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNE 406
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
M G+ DTWTY IDG K+ + +A EL ++ K Y+ LI GL
Sbjct: 407 MLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGL 461
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 146/350 (41%), Gaps = 46/350 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N L K + L+ + G+ P++ YN LIN CK+G V+ +
Sbjct: 659 PDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKAREL 718
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
I P+ VT++++I G C + EA LF ++ G P+ + Y LI+G +
Sbjct: 719 FDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGK 778
Query: 135 TGHTIVALNLFEEMASGN------------------------------------------ 152
G+ AL+LF E +
Sbjct: 779 EGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTY 838
Query: 153 ----GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD 208
+G +++A++LFL M+ NI P+ +TYTS++ + + + L +M
Sbjct: 839 TILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEA 898
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
+G+ + + + V+ CK GK EA +LL+ + G++ V++ L+ C +++
Sbjct: 899 RGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQIST 958
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
EL M + + + + L+ G+ K+ + A + G M G P
Sbjct: 959 VLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVP 1008
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/429 (29%), Positives = 195/429 (45%), Gaps = 43/429 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +N + L K Y + + +F +L + PD T+ I ++ F + GR+
Sbjct: 250 PSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEP 309
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ +++S P TFT LI L I EA F ++ C PNV TY TL+NGL +
Sbjct: 310 IQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAK 369
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G A +F EM N G G D A LF +MKD + P++ T
Sbjct: 370 AGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRT 429
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I A EA L ++ +QG P+V T+N ++D L K G+MD+ ++ M+
Sbjct: 430 YNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMV 489
Query: 243 QIGVR------PNA-------------------------FVYNTLMDGFCLTGRVNRAKE 271
+ G NA YNTLM F G V+ A +
Sbjct: 490 EKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVK 549
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
L M+ C TV +Y+ L++G K ++ A+SL EM +G +P VV Y++L +
Sbjct: 550 LLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFY 609
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIR 391
+ Q E + LFDEM R G AD TY I+ LCK+ + +A+++F ++ E +
Sbjct: 610 KRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLG 669
Query: 392 AYNCLIDGL 400
Y L+ L
Sbjct: 670 NYKTLLSSL 678
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 188/396 (47%), Gaps = 12/396 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ L K + LSLF + G D+ TY+++INC CK V V
Sbjct: 596 PSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDV 655
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
GR+ P + +L+ L + +I A +F +L+ P+ F YN ++NGL +
Sbjct: 656 FGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVK 715
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+ A L + M + N G G +++A +F +M +E PDVV
Sbjct: 716 SNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVA 775
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YTS++ + A + M + P+VVT++ ++D L K G+++EA + I
Sbjct: 776 YTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSI 835
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G PN VY++L+D F G V+RA ELF M+ C + +Y+ L++G K +
Sbjct: 836 SKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLN 895
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L EM G PD+V YN L + ++ V+ A F M+ G+ D T+ + I
Sbjct: 896 VAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLI 955
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
+ L K ++EA ELF ++ + YN LID
Sbjct: 956 ESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLID 991
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 178/375 (47%), Gaps = 23/375 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++ L L K++ D L +F L + L PD + YNI++N K RV +
Sbjct: 666 PLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKL 725
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + P+ T+TSL+ GL R+ EA +FTK+ G EP+V Y +L++ L +
Sbjct: 726 VDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGK 785
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G AL +F MA + PDVVTY+S+I
Sbjct: 786 GGKLSHALIIFRAMAK-----------------------KRCVPDVVTYSSLIDSLGKEG 822
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EA + +G PNV ++ ++D K G +D A L + M + PN YN
Sbjct: 823 RVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYN 882
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ G GR+N A++L ME +GC + +Y+ILI+G K ++ A S + M K
Sbjct: 883 NLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEK 942
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
GI PDV+ + +L L ++ ++ A +LFD M+ +G TY ID L + + EA
Sbjct: 943 GIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEA 1002
Query: 375 VELFRTLRILKCELD 389
+F +++ C D
Sbjct: 1003 AMIFHEMKVKGCMPD 1017
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 198/438 (45%), Gaps = 44/438 (10%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ M N+R SP V ++ L LAK + +F + PD YN LI+
Sbjct: 345 FNGMKNLRCSPN-VVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLG 403
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K G + + PN T+ +I L R EA LF L+ G P+VF
Sbjct: 404 KAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVF 463
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGE----------------------------- 154
TYNTLI+ L + G L + +EM GE
Sbjct: 464 TYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGF 523
Query: 155 --------------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
F G VD+A +L MK P VVTYT+++ G A +EA
Sbjct: 524 KSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAV 583
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
LL EM QG +P+VVT++ +M K + +E+ L D M++ G + Y+ +++
Sbjct: 584 SLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCL 643
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
C + V++A ++F M+ G + +Y L++ K+++I+ AL ++ E+ + PD
Sbjct: 644 CKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDT 703
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
+YN + L + ++V+ A KL D M+ + D +TY + +DGL K+ + EA +F
Sbjct: 704 FVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTK 763
Query: 381 LRILKCELDIRAYNCLID 398
+ E D+ AY L+D
Sbjct: 764 MTEEGHEPDVVAYTSLMD 781
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 191/429 (44%), Gaps = 43/429 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L L K D LFK + GL P+L TYNI+I+ K GR + +
Sbjct: 390 PDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQL 449
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE--------------- 119
+ P+ T+ +LI L ++ + A+ ++ G E
Sbjct: 450 FHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTI 509
Query: 120 ---------PNV-------FTYNTLINGLYRTGHTIVALNLFEEMASGN----------- 152
P++ TYNTL++ GH A+ L E M
Sbjct: 510 EGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTL 569
Query: 153 -GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
G G +D+A L +M+ + P VVTY+S++ F + E+ L EM+ +G
Sbjct: 570 VDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGC 629
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
+V T++++++ LCK+ +D+A + M + G+ P Y TL+ +++ A +
Sbjct: 630 VADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQ 689
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
+F ++ F Y+I++NG K+ ++ A L M ++ I PD+ Y +L L
Sbjct: 690 IFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLG 749
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIR 391
+ ++E AF +F +M +G D Y + +D L K + A+ +FR + +C D+
Sbjct: 750 KSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVV 809
Query: 392 AYNCLIDGL 400
Y+ LID L
Sbjct: 810 TYSSLIDSL 818
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 160/344 (46%), Gaps = 30/344 (8%)
Query: 54 TYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL 113
TY ++I +L + + + TSL++ + + + A +F ++
Sbjct: 184 TYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQM 243
Query: 114 RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKD 173
+ FGC P+ YN ++ L + G A+ +F ++ G+F
Sbjct: 244 KSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKL----GQF------------------ 281
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
I PD T+ + F + + A + EM+ G+ P V TF V++D L K+G +DE
Sbjct: 282 -RIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDE 340
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A + + M + PN Y TL++G GR+ A E+FV M+ C+ +Y+ LI+
Sbjct: 341 ACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLID 400
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
G K E + A L+ EM +G+ P++ YN + VL + + A++LF +++ G
Sbjct: 401 GLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVP 460
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
D +TY T ID L K ++ + L I+K E+ + C+I
Sbjct: 461 DVFTYNTLIDVLGKGG------QMDKVLAIIK-EMVEKGGECII 497
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 178/439 (40%), Gaps = 43/439 (9%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
C F + V ++ ++ LA + D V+ + + G ++ L+
Sbjct: 167 CFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRT 226
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
F VS + ++ P+ + +++ L A +F KL F +P+
Sbjct: 227 FGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPD 286
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFL 169
T+ ++ R+G A +EM + GV F +D+A + F
Sbjct: 287 AQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFN 346
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
MK+ +P+VVTYT+++ G A EA + +EM + P+ + +N ++D L K G
Sbjct: 347 GMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAG 406
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+ D A L M G+ PN YN ++ GR A +LF ++ G VF+Y+
Sbjct: 407 EADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYN 466
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKG----IKPDV------------------------- 320
LI+ K +++ L++ EM+ KG I D
Sbjct: 467 TLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSL 526
Query: 321 --VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
+ YNTL V+ A KL + M++ TY T +DGL K + EAV L
Sbjct: 527 GEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLL 586
Query: 379 RTLRILKCELDIRAYNCLI 397
R + CE + Y+ L+
Sbjct: 587 REMEKQGCEPSVVTYSSLM 605
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 129/271 (47%), Gaps = 4/271 (1%)
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
++ +++ GH I +++L + FG V A E+F QMK NP Y V+
Sbjct: 204 ILTAMWKEGHRI-SMHLLTSLLR---TFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVL 259
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
++ A + ++ +QP+ TF + + ++G++D A+ + MI+ G+
Sbjct: 260 ELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGID 319
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P + L+D +G ++ A + F M+++ C+ V +Y+ L+NG K +E A +
Sbjct: 320 PGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEV 379
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
+ EM PD + YNTL L + + + A LF EM+ G+ + TY I L K
Sbjct: 380 FVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGK 439
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLID 398
EA +LF L+ D+ YN LID
Sbjct: 440 AGRQPEAWQLFHDLKEQGAVPDVFTYNTLID 470
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 102/223 (45%), Gaps = 20/223 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ L L K + F+ S G P++ Y+ LI+ F K G V +
Sbjct: 806 PDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALEL 865
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R PN VT+ +L+ GL R+ A L ++ GC P++ TYN LI+G+ +
Sbjct: 866 FEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGK 925
Query: 135 TGHTIVALNLFEEMASGNGEFGVE-------------GFVDK---AKELFLQMKDENINP 178
G A + F+ M E G+ G VDK A ELF M++E NP
Sbjct: 926 MGMVDEAESYFKRMK----EKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNP 981
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
VVTY +I A +EA + EM +G P+ +T ++
Sbjct: 982 SVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 102/243 (41%), Gaps = 36/243 (14%)
Query: 194 NDWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
D + AKC Q G V T+ +++ L + D ++L M + G R + +
Sbjct: 160 KDLHLAKCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHL 219
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHT----------------------VF---- 286
+L+ F T V+ A E+F M+S GC + VF
Sbjct: 220 LTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLG 279
Query: 287 ---------SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
++ I ++ + ++ ++ A EM+ GI P V + L L + ++
Sbjct: 280 QFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNID 339
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
A K F+ M+ + + TY T ++GL K + EA E+F ++ C D AYN LI
Sbjct: 340 EACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLI 399
Query: 398 DGL 400
DGL
Sbjct: 400 DGL 402
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/413 (30%), Positives = 191/413 (46%), Gaps = 47/413 (11%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
D VL + + S G+ +L TYN+LI+ CK G++ +L ++ PN+ TF L
Sbjct: 350 DEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLL 409
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA-SGN 152
I+G C E + A L ++ P+ +Y +INGL +A L E+M SG
Sbjct: 410 IEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGL 469
Query: 153 G-----------EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
+ EG +++A+ L M + PD+ Y ++I A EA
Sbjct: 470 KPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 529
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG-- 259
L+E+ +G++P+ VTF + K GKM EA++ D M+ G+ PN +Y L++G
Sbjct: 530 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 589
Query: 260 ---------------------------------FCLTGRVNRAKELFVSMESMGCTHTVF 286
GRV A ++F ++ G VF
Sbjct: 590 KAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 649
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+YS LI+G+CK E+E A L+ EM KGI P++ IYN L L + ++RA KLFD M
Sbjct: 650 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 709
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G+ D+ TY T IDG CK+ + EA LF + + YN L+ G
Sbjct: 710 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG 762
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 196/408 (48%), Gaps = 18/408 (4%)
Query: 4 FDYMLN--MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
FD ML+ + P+ P + +L K + LS+F+RL++ G+ PD+ T + I+
Sbjct: 566 FDEMLDHGLMPNNP---LYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHG 622
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
K GRV V + P+ T++SLI G C + + +A L ++ + G PN
Sbjct: 623 LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPN 682
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG-------VEGF-----VDKAKELFL 169
+F YN L++GL ++G A LF+ M E ++G+ V +A LF
Sbjct: 683 IFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFH 742
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M + + P Y +++ G C D +A L EM+ +G ++FN ++D CK+
Sbjct: 743 EMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSC 801
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+ EAS+L MI + P+ Y T++D C G++ A LF M+ +Y+
Sbjct: 802 KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYT 861
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
L+ GY K + +L+ +M++KG+KPD V Y + + + AFKL DE+
Sbjct: 862 SLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGK 921
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
G+ + I LCK + EA +L + L + + A N L+
Sbjct: 922 GMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLV 969
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 187/398 (46%), Gaps = 15/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F +L + + L L + L P +Y +IN C +S +
Sbjct: 401 PNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKL 460
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ S PN V ++ LI +E RI EA L + G P++F YN +I+ L +
Sbjct: 461 LEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSK 520
Query: 135 TGHTIVALNLFEEMASGNG------EFGV-------EGFVDKAKELFLQMKDENINPDVV 181
G A E+ G G FG G + +A + F +M D + P+
Sbjct: 521 AGKMEEASTYLLEI-QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 579
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
YT +I G A + EA + + GV P+V T + + L KNG++ EA ++ +
Sbjct: 580 LYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 639
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G+ P+ F Y++L+ GFC G V +A EL M G +F Y+ L++G CK+ +I
Sbjct: 640 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 699
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A L+ M KG++PD V Y+T+ + V AF LF EM GV ++ Y
Sbjct: 700 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 759
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ G CK + +A+ LFR + + K ++N LIDG
Sbjct: 760 VHGCCKEGDMEKAMNLFREM-LQKGFATTLSFNTLIDG 796
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 194/399 (48%), Gaps = 14/399 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ I+ L + K + F+ + TGL PD + LI+ F + G + +
Sbjct: 296 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDE-VLR 354
Query: 75 LGRILRSCFTP-NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ ++ SC P N +T+ LI GLC ++ +AA + + GC+PN T+ LI G
Sbjct: 355 IKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYC 414
Query: 134 RTGHTIVALNLFEEMASGN-----GEFG--VEGF-----VDKAKELFLQMKDENINPDVV 181
R + AL L +EM N +G + G + A +L +M + P+VV
Sbjct: 415 REHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVV 474
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y+ +I + EA+ LL M GV P++ +N I+ L K GKM+EAS L +
Sbjct: 475 VYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 534
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
G++P+A + + G+ TG++ A + F M G Y++LING+ K +
Sbjct: 535 QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNL 594
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
ALS++ + + G+ PDV + L + +V+ A K+F E++ G+ D +TY +
Sbjct: 595 MEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL 654
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I G CK + +A EL + + +I YN L+DGL
Sbjct: 655 ISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 693
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 181/397 (45%), Gaps = 13/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + + L KN L +F L GL PD++TY+ LI+ FCK G V F +
Sbjct: 611 PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFEL 670
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ PN + +L+ GLC I A LF + G EP+ TY+T+I+G +
Sbjct: 671 HDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCK 730
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
+ + A +LF EM S + EG ++KA LF +M + ++
Sbjct: 731 SENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLS 789
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ ++I G+C + EA L EM+ + + P+ VT+ ++D CK GKM+EA+ L M
Sbjct: 790 FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQ 849
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ + + Y +LM G+ G+ + LF M + G +Y ++I +CK +
Sbjct: 850 ERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLV 909
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L E++ KG+ I++ L L + + A KL DEM G+ T +
Sbjct: 910 EAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLV 969
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + EA +F ++ L D L++G
Sbjct: 970 RSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 1006
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 189/430 (43%), Gaps = 47/430 (10%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++ L G L K + ++ GL P+ + Y+++I C++G + +
Sbjct: 228 VYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKR 287
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP---------------- 120
+ PN T+T + GLC R+ EA F +++ G +P
Sbjct: 288 SMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREG 347
Query: 121 -------------------NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE------- 154
N+ TYN LI+GL + G A + + M + +
Sbjct: 348 DIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFC 407
Query: 155 FGVEGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
+EG+ + +A EL +M+ N+ P V+Y ++I G C+ D + A LL +M
Sbjct: 408 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 467
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
G++PNVV +++++ G+++EA RLLD M GV P+ F YN ++ G++ A
Sbjct: 468 GLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 527
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
+ ++ G ++ I GY K ++ A + EML G+ P+ +Y L
Sbjct: 528 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 587
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
F+ + A +F + GV D T FI GL KN + EA+++F L+ D
Sbjct: 588 HFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 647
Query: 390 IRAYNCLIDG 399
+ Y+ LI G
Sbjct: 648 VFTYSSLISG 657
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 155/324 (47%), Gaps = 23/324 (7%)
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 110
D+YTY L+ CK G + VL + PN ++ +I+G+C I EA L
Sbjct: 227 DVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELK 286
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQ 170
+ G PN +TY + GL R +++AK F +
Sbjct: 287 RSMGEKGLVPNTYTYTIITAGLCRAKR-----------------------MNEAKLTFEE 323
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M+ + PD +++I GF D +E + M+ G+ N++T+NV++ LCK GK
Sbjct: 324 MQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGK 383
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
M++A+ +L M+ +G +PN+ + L++G+C + RA EL ME + SY
Sbjct: 384 MEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGA 443
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+ING C K++ A L +M G+KP+VV+Y+ L + ++E A +L D M G
Sbjct: 444 MINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSG 503
Query: 351 VAADTWTYRTFIDGLCKNSYIVEA 374
VA D + Y I L K + EA
Sbjct: 504 VAPDIFCYNAIISCLSKAGKMEEA 527
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 177/380 (46%), Gaps = 15/380 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ L K + L + G+ P+++ YN L++ CK G + +
Sbjct: 646 PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKL 705
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ P++VT++++I G C + EA +LF ++ G +P+ F YN L++G +
Sbjct: 706 FDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCK 765
Query: 135 TGHTIVALNLFEEMASGNGEFG--------VEGF-----VDKAKELFLQMKDENINPDVV 181
G A+NLF EM F ++G+ + +A +LF +M + I PD V
Sbjct: 766 EGDMEKAMNLFREMLQKG--FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHV 823
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT+VI C A EA L EM ++ + + VT+ +M K G+ E L + M
Sbjct: 824 TYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKM 883
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ GV+P+ Y ++ C + A +L + G + +LI CK +++
Sbjct: 884 VAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDL 943
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A L EM G+KP + NTL E +++ A ++F+ ++ G+ DT T
Sbjct: 944 TEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDL 1003
Query: 362 IDGLCKNSYIVEAVELFRTL 381
++G ++ +A L + L
Sbjct: 1004 VNGNLNDTDSEDARNLIKQL 1023
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 164/392 (41%), Gaps = 25/392 (6%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
+ N S P V F+IL + D ++F + + L N L+ K
Sbjct: 149 WFRNYGGSSPVV--FDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKC 206
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
G + + V +L + + T+T L+ LC + A + ++ G PN F Y
Sbjct: 207 GMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIY 266
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
+ +I G+ + G +D+A EL M ++ + P+ TYT
Sbjct: 267 SLVIEGMCQVGD-----------------------IDEAVELKRSMGEKGLVPNTYTYTI 303
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+ G C A NEAK EM G++P+ + ++D + G +DE R+ D+M+ G
Sbjct: 304 ITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCG 363
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
+ N YN L+ G C G++ +A E+ M ++GC ++ +LI GYC+ + AL
Sbjct: 364 IPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRAL 423
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
L EM + + P V Y + L + A KL ++M G+ + Y I
Sbjct: 424 ELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAY 483
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
I EA L + DI YN +I
Sbjct: 484 ASEGRIEEARRLLDGMSCSGVAPDIFCYNAII 515
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 94/228 (41%), Gaps = 27/228 (11%)
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLL----IEMMDQGVQPNVVTFNVIMDELCKNGK 230
+NPDV IR + N + K LL GV + +F+++ +LC +
Sbjct: 68 KLNPDV------IRAVLHQNQVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSEL 121
Query: 231 MDEASRLLDLMIQIGVRPNAF-----------------VYNTLMDGFCLTGRVNRAKELF 273
A+ +L MI+ ++ V++ L+D + G ++ A +F
Sbjct: 122 FGLANGVLTQMIRTPYSSSSILDSVLFWFRNYGGSSPVVFDILIDSYKRMGMLDEAANVF 181
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
++ ++ + L+ K +E +Y ML + DV Y L L +
Sbjct: 182 FVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKT 241
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+ A ++ EM G+ + + Y I+G+C+ I EAVEL R++
Sbjct: 242 GDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSM 289
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 197/387 (50%), Gaps = 24/387 (6%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP V + N L K ++ LF G+ +++TYNI+++ CK G++
Sbjct: 392 PPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACS 450
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L ++ PN V++ +I G C + + A+++F+ + +PNV TY+ LI+G +
Sbjct: 451 LLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNF 510
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ G + AL+LF++M S NI P T+ ++I G C
Sbjct: 511 KKGDSEKALDLFDQMLS-----------------------LNIAPTDFTFNTIINGLCKV 547
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+EA+ L +++G P+ +T+N I+D K G +D A + M + GV PN Y
Sbjct: 548 GQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTY 607
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
+L++GFC + R++ A + M G V +YS LI+G+CK +++E A L+ E+L
Sbjct: 608 TSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLE 667
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
G+ P+ ++YN++ +++ +E A + +M D + D TY T IDGL K +V
Sbjct: 668 VGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVF 727
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A +L+ + DI ++ L++GL
Sbjct: 728 ASDLYMEMLSKGIVPDIITFHVLVNGL 754
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/408 (31%), Positives = 193/408 (47%), Gaps = 50/408 (12%)
Query: 40 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
F+ G+ D Y+I+I CK + G +L + + P+ TFTS+I A
Sbjct: 243 FRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVA 302
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE- 158
+ ++EA L ++ G N+ +L+ G G+ ALNLF ++ +G F +
Sbjct: 303 QGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITE-DGLFPNKV 361
Query: 159 ------------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
G ++KA EL+ QMK I P V S++RG+ A W EA L E
Sbjct: 362 TYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEA 421
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+D GV N+ T+N++M LCK GKMDEA LLD M+ G+ PN YN ++ G C G +
Sbjct: 422 VDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNM 480
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ A +F M + V +YSILI+G K + E AL L+ +MLS I P +NT+
Sbjct: 481 DMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTI 540
Query: 327 FVVLFEIHQ-----------------------------------VERAFKLFDEMQRDGV 351
L ++ Q ++ A ++ EM GV
Sbjct: 541 INGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGV 600
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + TY + I+G CK++ I A++ +R ELD+ AY+ LIDG
Sbjct: 601 SPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDG 648
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 201/401 (50%), Gaps = 21/401 (5%)
Query: 15 PPVCSF-NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P +F +++ C+A+ + L L + + + G +L L+ +C G +
Sbjct: 288 PSEATFTSVIVACVAQGNMVEA-LRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALN 346
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ +I PN VT++ LI+G C I +A+ L+T++++ G P+VF N+L+ G
Sbjct: 347 LFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYL 406
Query: 134 RTGHTIVALNLFEEMASGNGEFGVE---------------GFVDKAKELFLQMKDENINP 178
+ A LF+E + GV G +D+A L M ++ + P
Sbjct: 407 KAPLWEEASKLFDEAV----DCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVP 462
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
+VV+Y +I G C + + A + +M+ + ++PNVVT+++++D K G ++A L
Sbjct: 463 NVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLF 522
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
D M+ + + P F +NT+++G C G+++ A++ + G + +Y+ +++G+ K
Sbjct: 523 DQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKE 582
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
I+ AL++Y EM G+ P+VV Y +L + ++++ A K DEM+ G+ D Y
Sbjct: 583 GNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAY 642
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
IDG CK + A +LF L + + YN +I G
Sbjct: 643 SALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISG 683
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 183/393 (46%), Gaps = 47/393 (11%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++NI+ L K D SL + + G+ P++ +YN +I C+ G + V +
Sbjct: 431 TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDM 490
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
L PN VT++ LI G + +A LF ++ P FT+NT+INGL + G
Sbjct: 491 LARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQM 550
Query: 139 IVAL----NLFEE--------MASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
A N EE S F EG +D A ++ +M + ++P+VVTYTS+
Sbjct: 551 SEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSL 610
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I GFC +N + A EM ++G++ +V ++ ++D CK M+ A L ++++G+
Sbjct: 611 INGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGL 670
Query: 247 RPNAFVYN-----------------------------------TLMDGFCLTGRVNRAKE 271
PN VYN TL+DG GR+ A +
Sbjct: 671 SPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASD 730
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
L++ M S G + ++ +L+NG C ++E A + EM K + P V+IYNTL F
Sbjct: 731 LYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYF 790
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
++ AF L DEM G+ D TY I+G
Sbjct: 791 REGNLKEAFTLHDEMLDRGLVPDDVTYDILING 823
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 149/349 (42%), Gaps = 24/349 (6%)
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 110
D +N L+N + + R+ + ++ P L+ L + I E L+
Sbjct: 149 DHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLY 208
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQ 170
K+ + G + FT + ++ + EG V++A+E F +
Sbjct: 209 NKMVLRGIYGDHFTVHVMVRACLK-----------------------EGRVEEAEEYFRE 245
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
K+ + D Y+ +I+ C + N LL EM ++G P+ TF ++ G
Sbjct: 246 TKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGN 305
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
M EA RL + MI G N V +LM G+C G ++ A LF + G +YS+
Sbjct: 306 MVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSV 365
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI G C + IE A LY +M GI P V N+L + E A KLFDE G
Sbjct: 366 LIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG 425
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
V A+ +TY + LCK + EA L + ++ +YN +I G
Sbjct: 426 V-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILG 473
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 2/118 (1%)
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
H VF+Y L+N Y + IE A+ + M+ + + P V N L L + + L
Sbjct: 150 HRVFNY--LLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDL 207
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+++M G+ D +T + K + EA E FR + +LD AY+ +I +
Sbjct: 208 YNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAV 265
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/472 (27%), Positives = 205/472 (43%), Gaps = 90/472 (19%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ L K + +DT + + G + TYN+LI C+ G V F
Sbjct: 115 PDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGF 174
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ P+ T+ +LI GLC R EA AL ++ +PNV Y LI+G R
Sbjct: 175 KKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMR 234
Query: 135 TGHTIVALNLFEEMASGNGEFGVE----------------GFVDKAKELFLQMKDENINP 178
G+ A + +EM + GV+ G +D+A L QM ++ P
Sbjct: 235 EGNADEAFKMIKEMVAA----GVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRP 290
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D +TY +I G ++ +A LL EM + G+ PNV T+++++ LC++G+ ++AS LL
Sbjct: 291 DTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLL 350
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCL-----------------------------------T 263
+ M G++PNAFVY L+ G+C
Sbjct: 351 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 410
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
GRV + + F M+ G F+YS LI+GY KN ++E A L ML G+KP+ VIY
Sbjct: 411 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIY 470
Query: 324 NTLFVVLFEIHQVER-----------------------------------AFKLFDEMQR 348
L F+ +E+ AF++ E+++
Sbjct: 471 IDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEK 530
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+G D Y + I GLCK + +A + + + +I YN LIDGL
Sbjct: 531 NGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGL 582
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 186/387 (48%), Gaps = 12/387 (3%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ R P + N L L + + + + + G+ PD+YTY+ LI +CK+
Sbjct: 72 MMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVR 131
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
VL + N VT+ LI GLC + EA + +G P+ FTY
Sbjct: 132 EFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYG 191
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDE 174
LINGL ++ + A L +EM+ + F EG D+A ++ +M
Sbjct: 192 ALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAA 251
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
+ P+ +TY +++RG C + A LL +M+ +P+ +T+N+I++ ++ +A
Sbjct: 252 GVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDA 311
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
RLL M G+ PN + Y+ ++ G C +G +A +L M + G F Y+ LI+G
Sbjct: 312 FRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISG 371
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
YC+ + A ++ +M + PD+ YN+L L ++ +VE + K F +MQ G+ +
Sbjct: 372 YCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPN 431
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTL 381
+TY I G KN + A +L + +
Sbjct: 432 EFTYSGLIHGYLKNGDLESAEQLVQRM 458
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 190/397 (47%), Gaps = 12/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + L + + D + K + + G+ P+ TY+ L+ CKMG++ ++
Sbjct: 220 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 279
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++R P+ +T+ +I+G +A L +++ G PNV+TY+ +I+GL +
Sbjct: 280 LKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQ 339
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+G A +L EEM + + EG V A E+F +M N+ PD+
Sbjct: 340 SGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYC 399
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S+I G E+ +M ++G+ PN T++ ++ KNG ++ A +L+ M+
Sbjct: 400 YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 459
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G++PN +Y L++ + + + + F SM G Y ILI+ + +E
Sbjct: 460 DTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNME 519
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A + E+ G PDV +Y++L L + E+AF + DEM + GV + Y I
Sbjct: 520 AAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALI 579
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
DGLCK+ I A +F ++ + Y LIDG
Sbjct: 580 DGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDG 616
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 186/397 (46%), Gaps = 13/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N++ ++ + L + + G+ P++YTY+I+I+ C+ G +
Sbjct: 290 PDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDL 349
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + PNA + LI G C E + A +F K+ P+++ YN+LI GL +
Sbjct: 350 LEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSK 409
Query: 135 TGHTIVALNLFEEMASGN---GEFGVEGFV---------DKAKELFLQMKDENINPDVVT 182
G + F +M EF G + + A++L +M D + P+ V
Sbjct: 410 VGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVI 469
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++ + ++D + M+DQGV + + +++ L +G M+ A R+L +
Sbjct: 470 YIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIE 529
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G P+ VY++L+ G C T +A + M G + Y+ LI+G CK+ +I
Sbjct: 530 KNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDIS 589
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A +++ +L+KG+ P+ V Y +L ++ + AF L++EM G+ D + Y
Sbjct: 590 YARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLT 649
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G + +A+ L + L+ I ++N L+DG
Sbjct: 650 TGCSSAGDLEQAMFLIEEM-FLRGHASISSFNNLVDG 685
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 182/410 (44%), Gaps = 39/410 (9%)
Query: 7 MLNMRPSPPPVCS----------------FNILFGCLAKNKHYDTVLSLFKRLNSTGLFP 50
M+ PSPP V + ++L K+ + + GL P
Sbjct: 21 MIRAYPSPPVVLASIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAP 80
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 110
+ N L+ + ++ + V ++ + +P+ T+++LI+ C A +
Sbjct: 81 SIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVL 140
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQ 170
++R GC N TYN LI GL R+G V++A
Sbjct: 141 VEMRERGCGLNTVTYNVLIAGLCRSGA-----------------------VEEAFGFKKD 177
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M+D + PD TY ++I G C + NEAK LL EM ++PNVV + ++D + G
Sbjct: 178 MEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGN 237
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
DEA +++ M+ GV+PN Y+ L+ G C G+++RA L M +Y++
Sbjct: 238 ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNL 297
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+I G+ ++ + A L EM + GI P+V Y+ + L + + E+A L +EM G
Sbjct: 298 IIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG 357
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + + Y I G C+ + A E+F + + D+ YN LI GL
Sbjct: 358 LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 407
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 165/373 (44%), Gaps = 46/373 (12%)
Query: 29 KNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 88
K+ + V S FK + G+ D Y ILI+ G + F VL I ++ P+
Sbjct: 479 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVH 538
Query: 89 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM 148
++SLI GLC + +A + ++ G +PN+ YN LI+GL ++G A N+F +
Sbjct: 539 VYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI 598
Query: 149 ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD 208
+ +G V P+ VTYTS+I G C D + A L EM+
Sbjct: 599 LA-------KGLV----------------PNCVTYTSLIDGSCKVGDISNAFYLYNEMLA 635
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
G+ P+ ++V+ G +++A L++ M G + +N L+DGFC G++
Sbjct: 636 TGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQE 694
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
+L + G + +I+G + ++ +++ E+ K + +++LF+
Sbjct: 695 TLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFM 754
Query: 329 VLFEIHQVERAFKLFDEMQRDG---------------VAADTW-----TYRTFIDGLCKN 368
+ I+Q + + D+M RD + A + +Y +D LC+
Sbjct: 755 DM--INQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRK 812
Query: 369 SYIVEAVELFRTL 381
+ EA+ L + +
Sbjct: 813 GKLSEALNLLKEM 825
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 126/298 (42%), Gaps = 31/298 (10%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
S P V ++ L L K + + ++ G+ P++ YN LI+ CK G +S+
Sbjct: 533 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 592
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
V IL PN VT+TSLI G C I A L+ ++ G P+ F Y+ L G
Sbjct: 593 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGC 652
Query: 133 YRTGHTIVALNLFEEM-ASGNGEFG-----VEGFVDKAK-----ELFLQMKDENINPDVV 181
G A+ L EEM G+ V+GF + K +L + + P+ +
Sbjct: 653 SSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNAL 712
Query: 182 TYTSVIRGFCYANDWNEAKCLLIE-------------------MMDQGVQPNVVTFNVIM 222
T ++I G A +E + +E M++QG P V ++I
Sbjct: 713 TIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIR 772
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
D CK G +D+A L D+++ Y ++D C G+++ A L M+ G
Sbjct: 773 DH-CKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 829
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 195/399 (48%), Gaps = 13/399 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N L K D LF+ + G PD+ TYN LINCFCK ++ F
Sbjct: 285 PDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHF 344
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + S PN VT+++LI LC E + +A +R G PN FTY +LI+ +
Sbjct: 345 LHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCK 404
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G+ AL L +EM F V EG + +A++LF M + P++ T
Sbjct: 405 AGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKT 464
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+++ G A LL E+ ++ ++P+++ + I+ LC K++E ++ M
Sbjct: 465 YTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMK 524
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+R N+ +Y MD + TG+ A L M +G T+ ++ +LI+G CK +E
Sbjct: 525 ACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVE 584
Query: 303 GALSLYGEMLSKGIKPD-VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A+ + M ++P+ V + L L + + +E A KLFDEMQ + D Y
Sbjct: 585 EAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTAL 644
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
IDG K+ EA+ + + L ELD+ AY L+ GL
Sbjct: 645 IDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGL 683
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/386 (31%), Positives = 196/386 (50%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S N LAK D F+ + G+ ++TYNI+I CK G + +
Sbjct: 215 PKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSL 274
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ + TP+ VT+ SLI G + E+ LF +++ GCEP+V TYN LIN +
Sbjct: 275 FHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCK 334
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+E+M KA +MK+ + P+VVTY+++I C +
Sbjct: 335 ----------YEQMP-------------KAFHFLHEMKNSGLKPNVVTYSTLIDALCKEH 371
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+A L++M G+ PN T+ ++D CK G + +A +L D M+Q+ V N Y
Sbjct: 372 MLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYT 431
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+DG C GR+ A++LF +M G T + +Y+ L++G+ KNK +E AL L E+ K
Sbjct: 432 TLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEK 491
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
IKPD+++Y T+ L +++E + EM+ G+ A++ Y +D K VEA
Sbjct: 492 KIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEA 551
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ L + + L E+ I + LIDGL
Sbjct: 552 LNLLQEMCDLGVEVTIVTFCVLIDGL 577
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 94/189 (49%)
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
V P + N + L K GK D +++ M+ G+ + F YN ++ C G + AK
Sbjct: 213 VFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAK 272
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
LF M+ MG T + +Y+ LI+GY K ++ + L+ EM G +PDV+ YN L
Sbjct: 273 SLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCF 332
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
+ Q+ +AF EM+ G+ + TY T ID LCK + +A++ +R + +
Sbjct: 333 CKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNE 392
Query: 391 RAYNCLIDG 399
Y LID
Sbjct: 393 FTYTSLIDA 401
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%)
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
P F+ + + G ++EA + M + V P A N + TG+ + + +
Sbjct: 180 PGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKF 239
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
F M G +VF+Y+I+I CK ++ A SL+ +M G+ PD+V YN+L +
Sbjct: 240 FRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGK 299
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
+ ++ +F LF+EM+ G D TY I+ CK + +A ++ + ++
Sbjct: 300 LGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVT 359
Query: 393 YNCLIDGL 400
Y+ LID L
Sbjct: 360 YSTLIDAL 367
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 192/389 (49%), Gaps = 28/389 (7%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + N++ L +D + S++ + G+ P + TYN L++ F + GRV
Sbjct: 193 PPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAK 252
Query: 74 VLGRILR---SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+L + C P+ VT+ +I GL + + +AA L ++R+ + + FT+N LI
Sbjct: 253 LLREMEARPGGCL-PSDVTYNVVINGLARKGELEKAAQLVDRMRM-SKKASAFTFNPLIT 310
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
G + G V+KA L L+M++E I P VVTY ++I G
Sbjct: 311 GYF-----------------------ARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGM 347
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
+ + A+ +EM G+ P+++T+N +++ CK G + EA L + + G+ P+
Sbjct: 348 FRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSV 407
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
YN L+DG+C G + A+ M GC V +Y+IL+NG K + + + E
Sbjct: 408 LTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDE 467
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
MLSKG++PD YNT + AF+L + M G+++DT TY F+DGLCK+
Sbjct: 468 MLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGN 527
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ +A L+ + + D Y CLI
Sbjct: 528 LKDAYVLWMKMVSDGLQPDCITYTCLIHA 556
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 181/385 (47%), Gaps = 23/385 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + + ++ + + F + + GL PDL TYN LIN +CK G + +
Sbjct: 335 PTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWL 394
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
G + R+ P+ +T+ L+ G C + EA ++ GC+P+V TY L+NG +
Sbjct: 395 FGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRK 454
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ + F+EM S + + PD Y + I
Sbjct: 455 VRNLAMVREFFDEMLS-----------------------KGLQPDCFAYNTRISAELILG 491
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+EA L M+ +G+ + VT+N+ +D LCK+G + +A L M+ G++P+ Y
Sbjct: 492 STSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYT 551
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ C GR+ A+++F M G + +Y++ I+ YC+ + A + +ML +
Sbjct: 552 CLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEE 611
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G++P+ V YN L L + + A++ F EM G++ + +TY IDG CK EA
Sbjct: 612 GVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEA 671
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+ L+ + D +N L G
Sbjct: 672 IRLYSEMHQHGIHPDHCTHNALFKG 696
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 2/149 (1%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IFD ML + PP ++ + + + + F+++ G+ P+ TYN+LI+
Sbjct: 569 IFDGML-VSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHAL 627
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+MGR + + +L +PN T+T LI G C E EA L++++ G P+
Sbjct: 628 CRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDH 687
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASG 151
T+N L G + G + A+ E + G
Sbjct: 688 CTHNALFKG-FDEGQSKHAIQYMENVVLG 715
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 197/387 (50%), Gaps = 24/387 (6%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP V + N L K ++ LF G+ +++TYNI+++ CK G++
Sbjct: 432 PPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACS 490
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L ++ PN V++ +I G C + + A+++F+ + +PNV TY+ LI+G +
Sbjct: 491 LLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNF 550
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ G + AL+LF++M S NI P T+ ++I G C
Sbjct: 551 KKGDSEKALDLFDQMLS-----------------------LNIAPTDFTFNTIINGLCKV 587
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+EA+ L +++G P+ +T+N I+D K G +D A + M + GV PN Y
Sbjct: 588 GQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTY 647
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
+L++GFC + R++ A + M G V +YS LI+G+CK +++E A L+ E+L
Sbjct: 648 TSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLE 707
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
G+ P+ ++YN++ +++ +E A + +M D + D TY T IDGL K +V
Sbjct: 708 VGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVF 767
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A +L+ + DI ++ L++GL
Sbjct: 768 ASDLYMEMLSKGIVPDIITFHVLVNGL 794
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/408 (31%), Positives = 193/408 (47%), Gaps = 50/408 (12%)
Query: 40 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
F+ G+ D Y+I+I CK + G +L + + P+ TFTS+I A
Sbjct: 283 FRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVA 342
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE- 158
+ ++EA L ++ G N+ +L+ G G+ ALNLF ++ +G F +
Sbjct: 343 QGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITE-DGLFPNKV 401
Query: 159 ------------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
G ++KA EL+ QMK I P V S++RG+ A W EA L E
Sbjct: 402 TYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEA 461
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+D GV N+ T+N++M LCK GKMDEA LLD M+ G+ PN YN ++ G C G +
Sbjct: 462 VDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNM 520
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ A +F M + V +YSILI+G K + E AL L+ +MLS I P +NT+
Sbjct: 521 DMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTI 580
Query: 327 FVVLFEIHQ-----------------------------------VERAFKLFDEMQRDGV 351
L ++ Q ++ A ++ EM GV
Sbjct: 581 INGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGV 640
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + TY + I+G CK++ I A++ +R ELD+ AY+ LIDG
Sbjct: 641 SPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDG 688
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 201/401 (50%), Gaps = 21/401 (5%)
Query: 15 PPVCSF-NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P +F +++ C+A+ + L L + + + G +L L+ +C G +
Sbjct: 328 PSEATFTSVIVACVAQGNMVEA-LRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALN 386
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ +I PN VT++ LI+G C I +A+ L+T++++ G P+VF N+L+ G
Sbjct: 387 LFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYL 446
Query: 134 RTGHTIVALNLFEEMASGNGEFGVE---------------GFVDKAKELFLQMKDENINP 178
+ A LF+E + GV G +D+A L M ++ + P
Sbjct: 447 KAPLWEEASKLFDEAV----DCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVP 502
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
+VV+Y +I G C + + A + +M+ + ++PNVVT+++++D K G ++A L
Sbjct: 503 NVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLF 562
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
D M+ + + P F +NT+++G C G+++ A++ + G + +Y+ +++G+ K
Sbjct: 563 DQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKE 622
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
I+ AL++Y EM G+ P+VV Y +L + ++++ A K DEM+ G+ D Y
Sbjct: 623 GNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAY 682
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
IDG CK + A +LF L + + YN +I G
Sbjct: 683 SALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISG 723
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 183/393 (46%), Gaps = 47/393 (11%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++NI+ L K D SL + + G+ P++ +YN +I C+ G + V +
Sbjct: 471 TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDM 530
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
L PN VT++ LI G + +A LF ++ P FT+NT+INGL + G
Sbjct: 531 LARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQM 590
Query: 139 IVAL----NLFEE--------MASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
A N EE S F EG +D A ++ +M + ++P+VVTYTS+
Sbjct: 591 SEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSL 650
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I GFC +N + A EM ++G++ +V ++ ++D CK M+ A L ++++G+
Sbjct: 651 INGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGL 710
Query: 247 RPNAFVYN-----------------------------------TLMDGFCLTGRVNRAKE 271
PN VYN TL+DG GR+ A +
Sbjct: 711 SPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASD 770
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
L++ M S G + ++ +L+NG C ++E A + EM K + P V+IYNTL F
Sbjct: 771 LYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYF 830
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
++ AF L DEM G+ D TY I+G
Sbjct: 831 REGNLKEAFTLHDEMLDRGLVPDDVTYDILING 863
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 149/349 (42%), Gaps = 24/349 (6%)
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 110
D +N L+N + + R+ + ++ P L+ L + I E L+
Sbjct: 189 DHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLY 248
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQ 170
K+ + G + FT + ++ + EG V++A+E F +
Sbjct: 249 NKMVLRGIYGDHFTVHVMVRACLK-----------------------EGRVEEAEEYFRE 285
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
K+ + D Y+ +I+ C + N LL EM ++G P+ TF ++ G
Sbjct: 286 TKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGN 345
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
M EA RL + MI G N V +LM G+C G ++ A LF + G +YS+
Sbjct: 346 MVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSV 405
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI G C + IE A LY +M GI P V N+L + E A KLFDE G
Sbjct: 406 LIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG 465
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
V A+ +TY + LCK + EA L + ++ +YN +I G
Sbjct: 466 V-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILG 513
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 2/118 (1%)
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
H VF+Y L+N Y + IE A+ + M+ + + P V N L L + + L
Sbjct: 190 HRVFNY--LLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDL 247
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+++M G+ D +T + K + EA E FR + +LD AY+ +I +
Sbjct: 248 YNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAV 305
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/412 (29%), Positives = 193/412 (46%), Gaps = 53/412 (12%)
Query: 22 ILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRS 81
+L K K ++ L K FP+ Y +IN FCK G+V F +L +
Sbjct: 81 VLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKER 140
Query: 82 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVA 141
+ + ++LI+GLC + RI EA F + C PNV TYNT++NGL + A
Sbjct: 141 GVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGE-ECSPNVITYNTVVNGLCKANRIDEA 199
Query: 142 LNLFEEM-----ASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYT 184
L LF++M AS E V + VDKA E F +M+ P+VVTY+
Sbjct: 200 LELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYS 259
Query: 185 SVIRGFC----------------------------------YANDWNEAKCLLIE-MMDQ 209
S+I G C + ND E C E ++
Sbjct: 260 SLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKS 319
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
G +PNVVT+NV + LCK G++DEA R+L M++ V P+ Y++++DGFC GR+++A
Sbjct: 320 GKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKA 379
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
++F M C ++ L++G+ ++K+ A ++ +M++ G P + YN L
Sbjct: 380 DDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDC 439
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+ VE A +++ +M+R D TY I LC+ + EA E +
Sbjct: 440 VCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVM 491
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 166/348 (47%), Gaps = 29/348 (8%)
Query: 44 NSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRI 103
N G + YT +L+N F K R +L L PN + +T++I G C ++
Sbjct: 68 NKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQV 127
Query: 104 MEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDK 163
+A L +++ G + +V ++TLI GL R G AL F+ M
Sbjct: 128 DQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG-------------- 173
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM-----MDQGVQPNVVTF 218
E +P+V+TY +V+ G C AN +EA L +M G +P+V+++
Sbjct: 174 ----------EECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISY 223
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
+ ++D LCK ++D+A M +G PN Y++L+DG C R + EL + M+
Sbjct: 224 STVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKE 283
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
G + ++ +++ KN E E A + +L G KP+VV YN L + +V+
Sbjct: 284 KGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDE 343
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
A+++ EM V D TY + IDG CK + +A ++F + + +C
Sbjct: 344 AYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHEC 391
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 181/398 (45%), Gaps = 20/398 (5%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
+ L L + D L FK + P++ TYN ++N CK R+ + + +
Sbjct: 150 STLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITYNTVVNGLCKANRIDEALELFDDMEK 208
Query: 81 ------SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
C P+ ++++++I LC R+ +A F ++R GC PNV TY++LI+GL +
Sbjct: 209 RYEASHGC-EPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCK 267
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
L L M + F +KA + F ++ P+VVT
Sbjct: 268 VDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVT 327
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y + G C A +EA +L+EM++ V P+V+T++ I+D CK G+MD+A + M+
Sbjct: 328 YNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMM 387
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
P+ + TL+ GF + A + M + G + +Y++L++ C +E
Sbjct: 388 VHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVE 447
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL +Y +M K +PD Y L L +V+ A + D M+ D V + +
Sbjct: 448 SALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALV 507
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ LCK + EA + + + C+ + L++ L
Sbjct: 508 EVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEEL 545
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 173/416 (41%), Gaps = 49/416 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLN-----STGLFPDLYTYNILINCFCKMGRVS 69
P V ++N + L K D L LF + S G PD+ +Y+ +I+ CK RV
Sbjct: 178 PNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVD 237
Query: 70 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
+ R+ PN VT++SLI GLC R E L ++ G N+ +N ++
Sbjct: 238 KAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAML 297
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENIN 177
+ L++ A FE + + V G VD+A + L+M + +
Sbjct: 298 HALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVT 357
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
PDV+TY+S+I GFC A ++A + MM P+ VTF ++ ++ K EA R+
Sbjct: 358 PDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRV 417
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
+ M+ G P YN LMD C V A E++ M+ +Y+ LI C+
Sbjct: 418 HEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCR 477
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE------------ 345
+ ++ A M + + P+ I + L VL + +V+ A + D
Sbjct: 478 ARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGET 537
Query: 346 --------------------MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
++ G AD TY + +CK EAVE+ +
Sbjct: 538 FKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQM 593
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 165/389 (42%), Gaps = 79/389 (20%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ FN + L KN + F+RL +G P++ TYN+ ++ CK GRV + +L
Sbjct: 290 IIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILL 349
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ S TP+ +T++S+I G C R+ +A +FT++ V C P+ T+ TL++G
Sbjct: 350 EMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHK 409
Query: 137 HTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYT 184
+ A + E+M + G++ + V+ A E++ +MK + PD TY
Sbjct: 410 KSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYA 469
Query: 185 SVIR---------------------------GFCYA--------NDWNEAKCLLIEMMDQ 209
+I+ C+A + +EA +L +++
Sbjct: 470 PLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEV 529
Query: 210 GVQPNVVTFNVIMDEL--------------------------------CKNGKMDEASRL 237
G QP TF ++++EL CK GK DEA +
Sbjct: 530 GCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEV 589
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
++ M+ GVRP+ Y ++ C RV A F M S GC + +Y++LI C
Sbjct: 590 IEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACS 649
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ A ++ M++ G P TL
Sbjct: 650 ADMADEAFRIFEAMVAAGFTPQAQTMRTL 678
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 165/367 (44%), Gaps = 26/367 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N+ L K D + + + + PD+ TY+ +I+ FCK GR+ V
Sbjct: 323 PNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDV 382
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R++ P+ VTF +L+ G + EA + + G P + TYN L++ +
Sbjct: 383 FTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCV-- 440
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G + V+ A E++ +MK + PD TY +I+ C A
Sbjct: 441 --------------------CGADS-VESALEIYHKMKRKKRQPDCNTYAPLIQCLCRAR 479
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+EAK L M V PN + +++ LCK G++DEA +LD ++++G +P +
Sbjct: 480 RVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFK 539
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L++ L + A +L + S G +YS+ + CK + + A+ + +M+ K
Sbjct: 540 ILVEELYLRKKWEAASKL---LRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLK 596
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G++PD Y + L + +VE A F++M G A TY I C EA
Sbjct: 597 GVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEA 656
Query: 375 VELFRTL 381
+F +
Sbjct: 657 FRIFEAM 663
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 122/224 (54%), Gaps = 6/224 (2%)
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
T ++ F A EA LL E ++ PN + + +++ CK G++D+A LLD M
Sbjct: 78 TCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEM 137
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ GV+ + +++TL+ G C GR++ A E F SM C+ V +Y+ ++NG CK I
Sbjct: 138 KERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-GEECSPNVITYNTVVNGLCKANRI 196
Query: 302 EGALSLYGEM-----LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
+ AL L+ +M S G +PDV+ Y+T+ L + +V++A++ F M+ G A +
Sbjct: 197 DEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVV 256
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY + IDGLCK E +EL ++ ++I +N ++ L
Sbjct: 257 TYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHAL 300
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 107/196 (54%), Gaps = 6/196 (3%)
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
G Q N T V+++ K + +EA RLL ++ PN +Y T+++GFC G+V++A
Sbjct: 71 GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
EL M+ G V +S LI G C+ I+ AL + M + P+V+ YNT+
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-GEECSPNVITYNTVVNG 189
Query: 330 LFEIHQVERAFKLFDEMQR-----DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
L + ++++ A +LFD+M++ G D +Y T ID LCK + +A E F+ +R +
Sbjct: 190 LCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAV 249
Query: 385 KCELDIRAYNCLIDGL 400
C ++ Y+ LIDGL
Sbjct: 250 GCAPNVVTYSSLIDGL 265
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 95/263 (36%), Gaps = 46/263 (17%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N+L C+ ++ L ++ ++ PD TY LI C C+ RV
Sbjct: 428 PGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEF 487
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY- 133
L + PN +L++ LC + + EA ++ + GC+P T+ L+ LY
Sbjct: 488 LDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYL 547
Query: 134 -------------------------------RTGHTIVALNLFEEMASGNGEFGVEGF-- 160
+ G A+ + E+M G EG
Sbjct: 548 RKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVL-KGVRPDEGTYV 606
Query: 161 -----------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
V+ A F +M P +VTYT +I C A+ +EA + M+
Sbjct: 607 AVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAA 666
Query: 210 GVQPNVVTFNVIMDELCKNGKMD 232
G P T + L G D
Sbjct: 667 GFTPQAQTMRTLSSCLRDAGYQD 689
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 216/413 (52%), Gaps = 21/413 (5%)
Query: 6 YMLNMRPS----PPPVCSFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILIN 60
Y+L+ PS P VC +N L G +N ++ + ++++L G P+L TYN++++
Sbjct: 215 YLLDEMPSYEVQPDAVC-YNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLD 273
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK+G V R++ + P+ +T+ ++I GLC + + AA +++++ G P
Sbjct: 274 GLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVP 333
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMA-SG-----------NGEFGVEGFVDKAKELF 168
+V YN+L+ G G A ++ M+ SG G F G VDKA +L+
Sbjct: 334 DVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFD-GGMVDKATDLW 392
Query: 169 -LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
L KD++++PD+VT++++I G C N++ +L E G + + +++ ++ LCK
Sbjct: 393 ELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCK 452
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
+G++D+A +L + + +PN+ +YN L++GFC + + A ++ M C+ T +
Sbjct: 453 DGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTIT 512
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y+ LI+G CK ++ A EML KG DV Y +L L +++ A L++++
Sbjct: 513 YNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQIL 572
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL-KCELDIRAYNCLIDG 399
G+ D + I GLC + EA +L ++ C ++ YN L+DG
Sbjct: 573 DKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDG 625
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 200/400 (50%), Gaps = 15/400 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++NI+ L D ++LF L GL PD TY+ L++ F K R+ + +
Sbjct: 157 PNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYL 216
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPNVFTYNTLINGLY 133
L + P+AV + +L+ G +A ++ +L R G PN+ TYN +++GL
Sbjct: 217 LDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLC 276
Query: 134 RTGHTIVALNLFEEMASGNGE-----FG--VEGF-----VDKAKELFLQMKDENINPDVV 181
+ G A +++E M + N + +G + G VD A ++ +M + PDVV
Sbjct: 277 KLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVV 336
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y S+++GFC+A EA M G++ NV ++N+++ L G +D+A+ L +L+
Sbjct: 337 IYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWELL 395
Query: 242 IQI-GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+ + P+ ++T++ G C G N++ ++ + G FSYS +I+G CK+
Sbjct: 396 EKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGR 455
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
++ A+ LY ++ KP+ IYN L + + A +++ +M + + T TY T
Sbjct: 456 LDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNT 515
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I GLCK +EA R + C LD+ Y LI GL
Sbjct: 516 LIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGL 555
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 164/336 (48%), Gaps = 16/336 (4%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINCFCKMGRVSHGFVVL 75
V S+NI+ L D L++ L L PD+ T++ +I+ C+ G + +L
Sbjct: 369 VTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQIL 428
Query: 76 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRT 135
S + +++S+I GLC + R+ +A L+ K+ + +PN YN LING +
Sbjct: 429 EEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQA 488
Query: 136 GHTIVALNLFEEMASGN-------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
A+ ++ +MA + G E +++ A +M ++ DV T
Sbjct: 489 SKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLE-ASRFTREMLEKGCMLDVNT 547
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S+IRG C + A L +++D+G+Q +VV N+++ LC GK+DEAS+LL M
Sbjct: 548 YGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMK 607
Query: 243 QIG-VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ PN YNTLMDGF TG ++A L++++ G + SY+ I G C
Sbjct: 608 EKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRT 667
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
+ L EML+ GI P + +N L + + ++
Sbjct: 668 PEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPIQ 703
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 188/401 (46%), Gaps = 48/401 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++ + L ++ D+ ++ + TGL PD+ YN L+ FC GRV +
Sbjct: 298 PDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKF 357
Query: 75 LGRI--------------LRSCF---------------------TPNAVTFTSLIKGLCA 99
+ L+ F +P+ VTF+++I GLC
Sbjct: 358 WDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCE 417
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG--- 156
+ ++ + + R G E + F+Y+++I+GL + G A+ L+E+++ + +
Sbjct: 418 KGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHI 477
Query: 157 ----VEGFVDKAK-----ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
+ GF +K ++ QM + + +P +TY ++I G C A + EA EM+
Sbjct: 478 YNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREML 537
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
++G +V T+ ++ LC++ K+D A L + ++ G++ + ++N L+ G C G+V+
Sbjct: 538 EKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVD 597
Query: 268 RAKELFVSM-ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
A +L M E C V +Y+ L++G+ + + A SL+ +L G+ PD++ YNT
Sbjct: 598 EASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTR 657
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
L ++ +L +EM G+ T+ + + K
Sbjct: 658 IKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIK 698
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 142/301 (47%), Gaps = 13/301 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +F+ + L + + L + + ++G D ++Y+ +I+ CK GR+ +
Sbjct: 403 PDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKL 462
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+I F PN+ + +LI G C S+ +A +++++ C P TYNTLI+GL +
Sbjct: 463 YEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCK 522
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
+ A EM V + +D A L+ Q+ D+ + DVV
Sbjct: 523 AEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVM 582
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+ +I G C A +EA LL EM ++ PNVVT+N +MD + G D+A+ L +
Sbjct: 583 HNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAI 642
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++ G+ P+ YNT + G C R +L M + G T +++IL+ K I
Sbjct: 643 LENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPI 702
Query: 302 E 302
+
Sbjct: 703 Q 703
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 155/379 (40%), Gaps = 94/379 (24%)
Query: 97 LCAESR-IMEAAAL--FTKLRVF-GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN 152
L A SR +M AAL F +L F GC P V ++N L++ R A F ++ +
Sbjct: 91 LSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLS--H 148
Query: 153 GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
G FG I P++ TY ++R C D + A L + +G+
Sbjct: 149 GAFG-----------------RRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLA 191
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL---------------- 256
P+ +T++ +M KN ++D A LLD M V+P+A YN L
Sbjct: 192 PDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRV 251
Query: 257 --------------------MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+DG C G A +++ M + + +Y +I+G C
Sbjct: 252 WEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLC 311
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV----- 351
++ +++ A +Y EM+ G+ PDVVIYN+L +V A+K +D M G+
Sbjct: 312 RSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTS 371
Query: 352 ----------------AADTW--------------TYRTFIDGLCKNSYIVEAVELFRTL 381
A D W T+ T I GLC+ + +++++
Sbjct: 372 YNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEA 431
Query: 382 RILKCELDIRAYNCLIDGL 400
R ELD +Y+ +I GL
Sbjct: 432 RTSGKELDEFSYSSMISGL 450
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 196/406 (48%), Gaps = 50/406 (12%)
Query: 43 LNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 102
L+S D +YN ++ C+ G + L R++ P AV++T+L++ LCAE R
Sbjct: 69 LSSLPSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERR 128
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV----- 157
+A L ++ G P+V TY TLI GL A+ L EM E V
Sbjct: 129 TGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSC 188
Query: 158 --EGFVDKAK-----ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG 210
+G+ + ++F +M I PDVV YT +I C +A ++ +MM++G
Sbjct: 189 LLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERG 248
Query: 211 VQPNVVTFNVIMDELCKNG-----------------------------------KMDEAS 235
++PNVVT+NV+++ +CK G +MDEA
Sbjct: 249 LEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAM 308
Query: 236 RLLDLMI--QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
LL+ MI + V PN +N+++ G C TGR+ +A ++ M GC + ++++LI
Sbjct: 309 GLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIG 368
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
G + +++ A+ L EM S G++PD Y+ L ++ QV+RA L +M+RDG+
Sbjct: 369 GLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEP 428
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ Y + LC+ + +A F + C+LD+ AY+ +I G
Sbjct: 429 ELVHYIPLLAALCEQGMMEQARNFFDEMHK-NCKLDVVAYSTMIHG 473
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/367 (32%), Positives = 179/367 (48%), Gaps = 15/367 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S+ L L + + L + + ++G+ PD+ TY LI C V +
Sbjct: 111 PTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVEL 170
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + S PN V ++ L++G C R + +F ++ G EP+V Y LI+ L R
Sbjct: 171 LREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCR 230
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G A + ++M E V EG V +A L M ++ + D VT
Sbjct: 231 EGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVT 290
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMM--DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
Y ++I G + +EA LL EM+ + V+PNVVTFN ++ LCK G+M +A ++ D+
Sbjct: 291 YNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDM 350
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M + G N +N L+ G +V +A EL M S G F+YSILING+CK +
Sbjct: 351 MAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQ 410
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
++ A SL +M GI+P++V Y L L E +E+A FDEM ++ D Y T
Sbjct: 411 VDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKN-CKLDVVAYST 469
Query: 361 FIDGLCK 367
I G C+
Sbjct: 470 MIHGACR 476
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 158/318 (49%), Gaps = 27/318 (8%)
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
+AV++ +++ LC + ++AA ++ P +Y TL+ L T A+ L
Sbjct: 77 DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136
Query: 146 EEM-ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
+M ASG + PDVVTY ++IRG C A D ++A LL
Sbjct: 137 RDMQASG------------------------VRPDVVTYGTLIRGLCDAADVDKAVELLR 172
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
EM + G++PNVV ++ ++ CK G+ + S++ + M G+ P+ +Y L+D C G
Sbjct: 173 EMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREG 232
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
+V +A ++ M G V +Y++LIN CK ++ A+SL ML KG+ D V YN
Sbjct: 233 KVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYN 292
Query: 325 TLFVVLFEIHQVERAFKLFDEM--QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
TL L + +++ A L +EM V + T+ + I GLCK + +A ++ +
Sbjct: 293 TLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMA 352
Query: 383 ILKCELDIRAYNCLIDGL 400
C ++ +N LI GL
Sbjct: 353 ENGCACNLVTFNLLIGGL 370
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 141/324 (43%), Gaps = 49/324 (15%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M+ R P V ++N+L + K +SL + G+ D TYN LI
Sbjct: 240 VMDKMME-RGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGL 298
Query: 63 CKMGRVSHGFVVLGRILR--SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+ + +L ++ + PN VTF S+I GLC R+ +A + + GC
Sbjct: 299 SGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCAC 358
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG-------VEGF-----VDKAKELF 168
N+ T+N LI GL R A+ L +EMAS E + GF VD+A+ L
Sbjct: 359 NLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLL 418
Query: 169 LQMKDENINP----------------------------------DVVTYTSVIRGFCYAN 194
+M+ + I P DVV Y+++I G C
Sbjct: 419 SKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKLDVVAYSTMIHGACRLR 478
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
D A+ L M+D+G+ P+ VT++++++ +G + A R+L M G P+ V++
Sbjct: 479 DRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFD 538
Query: 255 TLMDGFCLTGRVNRAKELFVSMES 278
+L+ G+ G + EL M +
Sbjct: 539 SLIKGYGAKGDTEKVLELIREMTA 562
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 122/402 (30%), Positives = 186/402 (46%), Gaps = 29/402 (7%)
Query: 22 ILFGCLAKNKHYDTVLS-------------LFKRLNSTGLFPDLYTYNILINCFCKMGRV 68
+L GC A +D V+ L R+ + G P + TY L+ C++ +
Sbjct: 237 LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQA 296
Query: 69 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTL 128
+LGR+ N V F ++I G AE ++ EA L+ + + GC+P+ TY+ L
Sbjct: 297 DEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSIL 352
Query: 129 INGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENI 176
++GL + G A+ L EM F G D + L +M + +
Sbjct: 353 MHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGL 412
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
+ Y +I C +EA L+ EM QG P++ ++N I+ LC N +M+EA
Sbjct: 413 TLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEH 472
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+ + +++ GV N YNT++ GR A L M GC+ V SY+ LI C
Sbjct: 473 MFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMC 532
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K+ ++ +L L EM KGIKP+ V YN L L + +V A +L +M G+A D
Sbjct: 533 KDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIV 592
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
TY T I+GLCK ++ A+ L L DI YN LI
Sbjct: 593 TYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 634
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 191/443 (43%), Gaps = 43/443 (9%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
++ M++ PP +F + L + D L+L + + G PD Y +I+
Sbjct: 159 LALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIH 218
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C G V+ +L +L + TF +++G+C R+ EAA L ++ GC P
Sbjct: 219 ALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMP 278
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGN--------GEFGVEGFVDKAKELFLQMK 172
V TY L+ GL R A + + N G EG + +A EL+ M
Sbjct: 279 GVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMG 338
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 232
+ PD TY+ ++ G C A LL EM +G PNVVT+ +++ CKNG D
Sbjct: 339 LKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWD 398
Query: 233 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
+ LL+ M G+ N+ YN ++ C GR++ A L M S GC + SY+ +I
Sbjct: 399 DTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTII 458
Query: 293 NGYCKNKEIE-----------------------------------GALSLYGEMLSKGIK 317
C N+++E A+ L EM+ G
Sbjct: 459 YHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCS 518
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
DVV YN L + + V+R+ L +EM G+ + +Y I LCK + +A+EL
Sbjct: 519 LDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALEL 578
Query: 378 FRTLRILKCELDIRAYNCLIDGL 400
+ + DI YN LI+GL
Sbjct: 579 SKQMLNQGLAPDIVTYNTLINGL 601
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 195/399 (48%), Gaps = 17/399 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P S+N++ LA+ + L+L++R+ + + P +T+ + C++GR
Sbjct: 137 PSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALA 196
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L + R P+AV + ++I LC + + EAA L ++ + GC +V T++ ++ G+
Sbjct: 197 LLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMC 256
Query: 134 RTGHTIVALNLFEEMASGNGEFGVE--GFV----------DKAKELFLQMKDENINPDVV 181
G A L + M + GV GF+ D+A+ + ++ + N VV
Sbjct: 257 GLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN----VV 312
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+ +VI G EA L M +G QP+ T++++M LCK G++ A RLL M
Sbjct: 313 LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREM 372
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G PN Y ++ FC G + + L M + G T Y+ +I CK+ +
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 432
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A+ L EM S+G PD+ YNT+ L Q+E A +F+ + +GV A+ TY T
Sbjct: 433 DEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTI 492
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I L ++ +AV L + + + C LD+ +YN LI +
Sbjct: 493 IHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAM 531
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 118/268 (44%), Gaps = 26/268 (9%)
Query: 114 RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKD 173
R FG +P+ +YN +++ L R AL L+ M +
Sbjct: 131 RRFGVQPSFRSYNVVLSVLARADCHADALALYRRM----------------------VHR 168
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
+ + P T+ R C +EA LL M G P+ V + ++ LC G + E
Sbjct: 169 DRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTE 228
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A+ LL+ M+ +G + ++ ++ G C GRV A L M + GC V +Y L+
Sbjct: 229 AATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQ 288
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
G C+ ++ + A + ML + + +VV++NT+ ++ A +L++ M G
Sbjct: 289 GLCRVRQADEARA----MLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQP 344
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTL 381
D TY + GLCK I AV L R +
Sbjct: 345 DAHTYSILMHGLCKLGRIGSAVRLLREM 372
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 99/227 (43%), Gaps = 5/227 (2%)
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG-VQPNVVTFNVIMDELCKNGKMDE 233
+ P +Y V+ A+ +A L M+ + V P TF V LC+ G+ DE
Sbjct: 134 GVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADE 193
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A LL M + G P+A +Y T++ C G V A L M MGC V ++ ++
Sbjct: 194 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 253
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
G C + A L M++KG P V+ Y L L + Q + A + + V
Sbjct: 254 GMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVV- 312
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ T I G + EA EL+ T+ + C+ D Y+ L+ GL
Sbjct: 313 ---LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 356
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 87/189 (46%), Gaps = 23/189 (12%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N + L ++ + + L K + G D+ +YN LI CK G V V+L +
Sbjct: 488 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM 547
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PN V++ LI LC E R+ +A L ++ G P++ TYNTLINGL + G
Sbjct: 548 AEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWM 607
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
ALNL E ++ +EN++PD++TY +I C ++
Sbjct: 608 HAALNLLE-----------------------KLHNENVHPDIITYNILISWHCKVRLLDD 644
Query: 199 AKCLLIEMM 207
A LL M
Sbjct: 645 AAMLLNRAM 653
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 58/114 (50%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V S+N L + K+ + D L L + + G+ P+ +YNILI+ CK RV +
Sbjct: 521 VVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSK 580
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
++L P+ VT+ +LI GLC + A L KL P++ TYN LI+
Sbjct: 581 QMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 634
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 122/402 (30%), Positives = 186/402 (46%), Gaps = 29/402 (7%)
Query: 22 ILFGCLAKNKHYDTVLS-------------LFKRLNSTGLFPDLYTYNILINCFCKMGRV 68
+L GC A +D V+ L R+ + G P + TY L+ C++ +
Sbjct: 221 LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQA 280
Query: 69 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTL 128
+LGR+ N V F ++I G AE ++ EA L+ + + GC+P+ TY+ L
Sbjct: 281 DEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSIL 336
Query: 129 INGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENI 176
++GL + G A+ L EM F G D + L +M + +
Sbjct: 337 MHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGL 396
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
+ Y +I C +EA L+ EM QG P++ ++N I+ LC N +M+EA
Sbjct: 397 TLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEH 456
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+ + +++ GV N YNT++ GR A L M GC+ V SY+ LI C
Sbjct: 457 MFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMC 516
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K+ ++ +L L EM KGIKP+ V YN L L + +V A +L +M G+A D
Sbjct: 517 KDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIV 576
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
TY T I+GLCK ++ A+ L L DI YN LI
Sbjct: 577 TYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 618
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 192/443 (43%), Gaps = 43/443 (9%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F ++ M++ PP +F + L + D L+L + + G PD Y +I+
Sbjct: 143 FALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIH 202
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C G V+ +L +L + TF +++G+C R+ EAA L ++ GC P
Sbjct: 203 ALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMP 262
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGN--------GEFGVEGFVDKAKELFLQMK 172
V TY L+ GL R A + + N G EG + +A EL+ M
Sbjct: 263 GVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMG 322
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 232
+ PD TY+ ++ G C A LL EM +G PNVVT+ +++ CKNG D
Sbjct: 323 LKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWD 382
Query: 233 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
+ LL+ M G+ N+ YN ++ C GR++ A L M S GC + SY+ +I
Sbjct: 383 DTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTII 442
Query: 293 NGYCKNKEIE-----------------------------------GALSLYGEMLSKGIK 317
C N+++E A+ L EM+ G
Sbjct: 443 YHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCS 502
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
DVV YN L + + V+R+ L +EM G+ + +Y I LCK + +A+EL
Sbjct: 503 LDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALEL 562
Query: 378 FRTLRILKCELDIRAYNCLIDGL 400
+ + DI YN LI+GL
Sbjct: 563 SKQMLNQGLAPDIVTYNTLINGL 585
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 87/189 (46%), Gaps = 23/189 (12%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N + L ++ + + L K + G D+ +YN LI CK G V V+L +
Sbjct: 472 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM 531
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PN V++ LI LC E R+ +A L ++ G P++ TYNTLINGL + G
Sbjct: 532 AEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWM 591
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
ALNL E ++ +EN++PD++TY +I C ++
Sbjct: 592 HAALNLLE-----------------------KLHNENVHPDIITYNILISWHCKVRLLDD 628
Query: 199 AKCLLIEMM 207
A LL M
Sbjct: 629 AAMLLNRAM 637
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 58/114 (50%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V S+N L + K+ + D L L + + G+ P+ +YNILI+ CK RV +
Sbjct: 505 VVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSK 564
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
++L P+ VT+ +LI GLC + A L KL P++ TYN LI+
Sbjct: 565 QMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 618
>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 827
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 120/394 (30%), Positives = 200/394 (50%), Gaps = 16/394 (4%)
Query: 19 SFN-ILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGR 77
SFN +++G + + ++ L + + + S+G+ PD+Y+Y+ILIN FC G V ++
Sbjct: 393 SFNDVIYGFCKRGEVFEA-LQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEE 451
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
+ S P+ V++TSLI GLC ++ + A +F + C+ + Y TLI+G G
Sbjct: 452 MEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGD 511
Query: 138 TIVALNLFEEMASGN-------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
A+ L EEM G + + G D+A E+F M + I PD +
Sbjct: 512 MDSAIKLLEEMICNELVPTAFSCRSLIRGYYKL-GLFDQALEVFNAMLRDGIWPDTIACN 570
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
++ G C A + EA LL + + G N ++N I+ +LCK G + A LL M++
Sbjct: 571 YILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKR 630
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
V P+ Y+TL+ GF RA LF M +G T + +Y+IL++ + + ++ A
Sbjct: 631 NVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEA 690
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
++ EM +G+ D + Y TL V ++++A+ LF+EM R+G + + TY IDG
Sbjct: 691 YGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDG 750
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
CK++ I A +F + D+ Y LID
Sbjct: 751 FCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLID 784
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 187/398 (46%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ L K + + L L + L+ T + +++N +I FCK G V V
Sbjct: 354 PTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQV 413
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + S P+ +++ LI C + +M+ L ++ +P++ +Y +LI+GL +
Sbjct: 414 LEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCK 473
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
A+++F + + + + F ++G +D A +L +M + P +
Sbjct: 474 KNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFS 533
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
S+IRG+ +++A + M+ G+ P+ + N I+D C+ G EA LL+
Sbjct: 534 CRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQ 593
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G N YN ++ C G RA EL M +V +YS LI+G+ K +
Sbjct: 594 EHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFK 653
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A++L+ M+ GI ++ Y L + H++ A+ +F EM+ G+ D +Y T I
Sbjct: 654 RAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLI 713
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G C N + +A LF + C ++ Y C+IDG
Sbjct: 714 VGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGF 751
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 173/382 (45%), Gaps = 27/382 (7%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F++L A N + L +F GL PD+ T N L+ C + RV V +
Sbjct: 250 FDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELK 309
Query: 80 RSCFTPNAVTFTSLIKGLCAE----SRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRT 135
+PN T+T ++ C++ + + +AA + K+ G +P V TY+T I+GL +
Sbjct: 310 DRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKV 369
Query: 136 GHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
G+ AL L + N F D VI GFC +
Sbjct: 370 GNVEAALMLIRNLHYTNQPLNSHSFND-----------------------VIYGFCKRGE 406
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
EA +L EM G+ P+V +++++++ C G + + L++ M ++P+ Y +
Sbjct: 407 VFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTS 466
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L+ G C + A ++F S+ + C + Y LI+G+C +++ A+ L EM+
Sbjct: 467 LIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNE 526
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ P +L +++ ++A ++F+ M RDG+ DT +DG C+ Y EA+
Sbjct: 527 LVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEAL 586
Query: 376 ELFRTLRILKCELDIRAYNCLI 397
L + L+ +YN +I
Sbjct: 587 TLLEDFQEHGFNLNPHSYNAII 608
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 169/369 (45%), Gaps = 14/369 (3%)
Query: 4 FDYMLNMRPS--PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
D M M S P + S+ L L K + +F + ++ D Y LI+
Sbjct: 446 LDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDG 505
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
FC G + +L ++ + P A + SLI+G +A +F + G P+
Sbjct: 506 FCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPD 565
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMA---------SGNG---EFGVEGFVDKAKELFL 169
N +++G R G+ AL L E+ S N + EG+ ++A EL
Sbjct: 566 TIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLP 625
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M N+ P VV Y+++I GF +++ A L M+ G+ N+ T+ ++M +
Sbjct: 626 RMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSH 685
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
KM EA + M + G+ + Y TL+ GFC + +A LF M GC+ V +Y+
Sbjct: 686 KMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYT 745
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
+I+G+CK+ I+ A ++ +M + PDVV Y L + ++A KL+D M+
Sbjct: 746 CIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDK 805
Query: 350 GVAADTWTY 358
GV D T+
Sbjct: 806 GVLPDDITH 814
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 117/250 (46%), Gaps = 4/250 (1%)
Query: 155 FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
F ++ A ++F K + PD+ T +++ AN + + E+ D+G PN
Sbjct: 257 FASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPN 316
Query: 215 VVTFNVIMDELCKN----GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
+ T+ ++M+ C + M +A+ +L + + G +P Y+T + G C G V A
Sbjct: 317 IYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAAL 376
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
L ++ S++ +I G+CK E+ AL + EM S GI PDV Y+ L
Sbjct: 377 MLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAF 436
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
V + L +EM+ + +Y + I GLCK + + AV++F ++ C+ D
Sbjct: 437 CGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDS 496
Query: 391 RAYNCLIDGL 400
Y LIDG
Sbjct: 497 TVYETLIDGF 506
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 132/300 (44%), Gaps = 27/300 (9%)
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
+ V F LI + S + A +F+ + G EP++ T N L+ L +F
Sbjct: 246 SGVVFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVF 305
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY----ANDWNEAKC 201
EE +KD +P++ TYT ++ +C +A
Sbjct: 306 EE-----------------------LKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAV 342
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
+L ++ G +P VVT++ + LCK G ++ A L+ + N+ +N ++ GFC
Sbjct: 343 ILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFC 402
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
G V A ++ M+S G V+SYSILIN +C ++ L L EM IKP +V
Sbjct: 403 KRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIV 462
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
Y +L L + + ++ A +F + D+ Y T IDG C + A++L +
Sbjct: 463 SYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEM 522
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 15/224 (6%)
Query: 187 IRGFCYANDWNEAKCLLIEMMD------QGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
I GFC NEAK E+ Q V+ + V F+V++ N ++ A +
Sbjct: 218 IVGFC-----NEAKYDTFELFSAFLDSPQHVERSGVVFDVLISVFASNSMLENALDVFSN 272
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK--- 297
+G+ P+ N L+ RV + +F ++ G + +++Y+I++N YC
Sbjct: 273 AKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVG 332
Query: 298 -NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
+ + A + G++ G KP VV Y+T L ++ VE A L + ++
Sbjct: 333 CDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSH 392
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++ I G CK + EA+++ ++ D+ +Y+ LI+
Sbjct: 393 SFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAF 436
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S+ L N+ +LF+ ++ G P++ TY +I+ FCK R+ V ++
Sbjct: 708 SYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKM 767
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTL 128
R P+ VT+T LI +A L+ ++ G P+ T+N L
Sbjct: 768 NRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVL 817
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 182/385 (47%), Gaps = 7/385 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ + L + LF+ + GL D+YTY I+++ FCK G +
Sbjct: 440 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 499
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ TPN VT+T+LI ++ A LF + GC PN+ TY+ LI+G +
Sbjct: 500 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 559
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G A +FE M V+ + F Q D + P+VVTY +++ GFC ++
Sbjct: 560 AGQVEKACQIFERMCGSKDVPDVDMY-------FKQYDDNSERPNVVTYGALLDGFCKSH 612
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EA+ LL M +G +PN + ++ ++D LCK GK+DEA + M + G + Y+
Sbjct: 613 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 672
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L+D + R + A ++ M C V Y+ +I+G CK + + A L M K
Sbjct: 673 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 732
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G +P+VV Y + I ++E +L + M GVA + TYR ID CKN + A
Sbjct: 733 GCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVA 792
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
L ++ Y +I+G
Sbjct: 793 HNLLEEMKQTHWPTHTAGYRKVIEG 817
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 186/419 (44%), Gaps = 36/419 (8%)
Query: 15 PPVCSFNILFGCLAKNKH------YDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV 68
P +NIL G + +K D + + + G+ + + C C G+
Sbjct: 364 PGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 423
Query: 69 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTL 128
F V+ ++ F P+ T++ ++ LC S++ A LF +++ G +V+TY +
Sbjct: 424 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 483
Query: 129 INGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENI 176
++ + G A F EM V + V A ELF M E
Sbjct: 484 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 543
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMM-----------------DQGVQPNVVTFN 219
P++VTY+++I G C A +A C + E M D +PNVVT+
Sbjct: 544 LPNIVTYSALIDGHCKAGQVEKA-CQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYG 602
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
++D CK+ +++EA +LLD M G PN VY+ L+DG C G+++ A+E+ M
Sbjct: 603 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH 662
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G T+++YS LI+ Y K K + A + +ML P+VVIY + L ++ + + A
Sbjct: 663 GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEA 722
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
+KL M+ G + TY IDG I +EL + + Y LID
Sbjct: 723 YKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 781
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 191/423 (45%), Gaps = 39/423 (9%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
PSP FN L + + L K++ G P YNILI C + S
Sbjct: 329 PSPK---IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG-DKDSLN 384
Query: 72 FVVL-------GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFT 124
F +L +L + N + +S + LC+ + +A ++ ++ G P+ T
Sbjct: 385 FDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTST 444
Query: 125 YNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMK 172
Y+ ++N L +A LFEEM G F G +++A++ F +M+
Sbjct: 445 YSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR 504
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 232
+ P+VVTYT++I + A + A L M+ +G PN+VT++ ++D CK G+++
Sbjct: 505 EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVE 564
Query: 233 EASRLLDLMI----------------QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
+A ++ + M RPN Y L+DGFC + RV A++L +M
Sbjct: 565 KACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 624
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
GC Y LI+G CK +++ A + EM G + Y++L F++ +
Sbjct: 625 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQ 684
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
+ A K+ +M + A + Y IDGLCK EA +L + + C+ ++ Y +
Sbjct: 685 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 744
Query: 397 IDG 399
IDG
Sbjct: 745 IDG 747
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 190/437 (43%), Gaps = 63/437 (14%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L K K LF+ + S G P++ TY+ LI+ CK G+V +
Sbjct: 510 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI 569
Query: 75 LGRILRS----------------CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC 118
R+ S PN VT+ +L+ G C R+ EA L + + GC
Sbjct: 570 FERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 629
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE---FGVEGFVDK---------AKE 166
EPN Y+ LI+GL + G A + EM+ + +D+ A +
Sbjct: 630 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 689
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
+ +M + + P+VV YT +I G C +EA L+ M ++G QPNVVT+ ++D
Sbjct: 690 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 749
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMGCTHT- 284
GK++ LL+ M GV PN Y L+D C G ++ A L M ++ THT
Sbjct: 750 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 809
Query: 285 -------------------------------VFSYSILINGYCKNKEIEGALSLYGEM-- 311
+ Y +LI+ K + +E AL L E+
Sbjct: 810 GYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 869
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
S + YN+L L ++VE AF+LF EM + GV + ++ + I GL +NS I
Sbjct: 870 FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKI 929
Query: 372 VEAVELFRTLRILKCEL 388
EA+ L + + C L
Sbjct: 930 SEALLLLDFISHMVCPL 946
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 194/455 (42%), Gaps = 72/455 (15%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L K D+ + + ++ L D +T CK+G+ +
Sbjct: 192 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 251
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY--------- 125
+ F P+ V +T LI GLC S EA ++R C PNV TY
Sbjct: 252 ---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 308
Query: 126 --------------------------NTLINGLYRTGHTIVALNLFEEMAS--------- 150
N+L++ +G A L ++M
Sbjct: 309 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVV 368
Query: 151 ---------GNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
G+ + +D A++ + +M + + + +S R C A + +A
Sbjct: 369 YNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFS 428
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
++ EM+ QG P+ T++ +++ LC KM+ A L + M + G+ + + Y ++D FC
Sbjct: 429 VIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 488
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
G + +A++ F M +GCT V +Y+ LI+ Y K K++ A L+ MLS+G P++V
Sbjct: 489 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIV 548
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEM--QRDGVAADTW--------------TYRTFIDGL 365
Y+ L + QVE+A ++F+ M +D D + TY +DG
Sbjct: 549 TYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGF 608
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
CK+ + EA +L + + CE + Y+ LIDGL
Sbjct: 609 CKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 643
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 159/360 (44%), Gaps = 21/360 (5%)
Query: 56 NILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-----F 110
N+L+ C+ G S LGR+ F P+ T+ LI+ R+ A+ +
Sbjct: 163 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 222
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALN-------LFEEMASGNGEFGVEGFVDK 163
LR+ G F Y+ G +R T+V + ++ SG E ++
Sbjct: 223 ANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCE---ASLFEE 279
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
A + +M+ + P+VVTY++++ G K +L MM +G P+ FN ++
Sbjct: 280 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 339
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR------VNRAKELFVSME 277
C +G A +LL M++ G P VYN L+ C ++ A++ + M
Sbjct: 340 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEML 399
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
+ G + S C + E A S+ EM+ +G PD Y+ + L ++E
Sbjct: 400 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 459
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
AF LF+EM+R G+ AD +TY +D CK I +A + F +R + C ++ Y LI
Sbjct: 460 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 519
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 137/318 (43%), Gaps = 24/318 (7%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
++M P ++ L L K D + ++ G LYTY+ LI+ + K+ R
Sbjct: 624 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR 683
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
VL ++L + PN V +T +I GLC + EA L + GC+PNV TY
Sbjct: 684 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 743
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGV----------------EGFVDKAKELFLQM 171
+I+G G L L E M S GV G +D A L +M
Sbjct: 744 MIDGFGMIGKIETCLELLERMGSK----GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 799
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
K + Y VI GF ++ E+ LL E+ P + + +++D L K ++
Sbjct: 800 KQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRL 857
Query: 232 DEASRLLDLMIQIGVR--PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+ A RLL+ + + YN+L++ CL +V A +LF M G + S+
Sbjct: 858 EMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFC 917
Query: 290 ILINGYCKNKEIEGALSL 307
LI G +N +I AL L
Sbjct: 918 SLIKGLFRNSKISEALLL 935
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 102/235 (43%), Gaps = 23/235 (9%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ + P V ++ + +T L L +R+ S G+ P+ TY +LI+ CK G
Sbjct: 728 MMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNG 787
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ +L + ++ + + + +I+G E +E+ L ++ P + Y
Sbjct: 788 ALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLSVYR 845
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
LI+ L + +AL L EE+A+ + VD + TY S+
Sbjct: 846 LLIDNLIKAQRLEMALRLLEEVATFSAT-----LVDYSS----------------TYNSL 884
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
I C AN A L EM +GV P + +F ++ L +N K+ EA LLD +
Sbjct: 885 IESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFI 939
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 62/160 (38%), Gaps = 7/160 (4%)
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY--SILINGYCKNKE 300
QIG + A VYN L+D +E + VF ++L+ +C+N
Sbjct: 117 QIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDD--KEVFGQFLNVLVRKHCRNGS 174
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
AL G + +P YN L + +++ A + EM + D +T R
Sbjct: 175 FSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRC 234
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
F LCK EA+ L T + D Y LI GL
Sbjct: 235 FAYSLCKVGKWREALTLVETENFVP---DTVFYTKLISGL 271
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 186/398 (46%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+N + L K + V L + + P++ T+N LI+ C+ G V
Sbjct: 225 PDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEV 284
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ TP+ + ++I G+C E + A + ++ +G +PNV YNTL+ GL
Sbjct: 285 LAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCS 344
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
L EM + F G VD+ EL QM PDV+T
Sbjct: 345 AERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVIT 404
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+VI GFC +EA LL M G +PN +++ +++ LC + +A L+ MI
Sbjct: 405 YTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMI 464
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q G N +NTL++ C G V +A EL M GC+ + SYS +I+G K + +
Sbjct: 465 QQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTD 524
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL L M++KG+ P+ +IY+++ L ++ + ++FD +Q + +D Y I
Sbjct: 525 EALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVI 584
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LCK A+E + C + Y LI GL
Sbjct: 585 SSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGL 622
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 190/385 (49%), Gaps = 21/385 (5%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P PP ++++ + + + + + + L++ G D+ N+++N C G V
Sbjct: 155 PIPP---MYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKA 211
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI-- 129
+L + P+ V++ +++KGLC R L ++ C PN+ T+NTLI
Sbjct: 212 LHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISY 271
Query: 130 ---NGLYRTGHTIVA----------LNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI 176
NGL+ H ++A + ++ + G EG + A E+ +M +
Sbjct: 272 LCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDG---ICKEGHLKVAHEILNRMPSYGL 328
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
P+VV Y ++++G C A W E + LL EM D+ + VTFN+++D C+NG +D
Sbjct: 329 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE 388
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
LL+ M+ G P+ Y T+++GFC G ++ A L SM + GC SY+I++ G C
Sbjct: 389 LLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 448
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
+ A L +M+ +G + + +NTL L + VE+A +L +M +G + D
Sbjct: 449 SAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 508
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTL 381
+Y T IDGL K EA+EL +
Sbjct: 509 SYSTVIDGLGKAGKTDEALELLNVM 533
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 168/358 (46%), Gaps = 15/358 (4%)
Query: 55 YNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLR 114
YN ++ +C+ G++ + + PNA T+ +++ LCA RI +A A+ ++
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 115 VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVD 162
GC P Y+ ++ R G A+ + E++ + V +G VD
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
KA L + PDVV+Y +V++G C A W + L+ EM+ PN+VTFN ++
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
LC+NG + +L M + G P+ +Y T++DG C G + A E+ M S G
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
V Y+ L+ G C + E L EM K D V +N L + V+R +L
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++M G D TY T I+G CK I EAV L +++ C+ + +Y ++ GL
Sbjct: 390 LEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGL 447
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 178/381 (46%), Gaps = 14/381 (3%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + +FN L L +N ++ V + ++ G PD+ Y +I+ CK G +
Sbjct: 259 PPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHE 318
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L R+ PN V + +L+KGLC+ R E L ++ C + T+N L++
Sbjct: 319 ILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFC 378
Query: 134 RTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDV 180
+ G + L E+M NG F EG +D+A L M P+
Sbjct: 379 QNGLVDRVIELLEQMLVHGCMPDVITYTTVING-FCKEGLIDEAVMLLKSMTACGCKPNT 437
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
++YT V++G C A W +A+ L+ +M+ QG N +TFN +++ LCK G +++A LL
Sbjct: 438 ISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQ 497
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M+ G P+ Y+T++DG G+ + A EL M + G + YS + + +
Sbjct: 498 MLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGR 557
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
I + ++ + I+ D V+YN + L + + ERA + M G + TY
Sbjct: 558 INKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTI 617
Query: 361 FIDGLCKNSYIVEAVELFRTL 381
I GL ++ EA E+ L
Sbjct: 618 LIRGLASEGFVKEAQEMLTEL 638
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 150/297 (50%), Gaps = 23/297 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+FNIL +N D V+ L +++ G PD+ TY +IN FCK G + ++L +
Sbjct: 369 TFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 428
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PN +++T ++KGLC+ R ++A L +++ GC N T+NTLIN L +
Sbjct: 429 TACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCK---- 484
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+G V++A EL QM +PD+++Y++VI G A +E
Sbjct: 485 -------------------KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDE 525
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A LL M+++G+ PN + ++ I L + G++++ ++ D + +R +A +YN ++
Sbjct: 526 ALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVIS 585
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
C G RA E M S GC +Y+ILI G ++ A + E+ SKG
Sbjct: 586 SLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
Length = 645
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 193/385 (50%), Gaps = 12/385 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + N + L K + LF + GL P + TYN LIN G V+ V
Sbjct: 149 PALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEV 208
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ PN VT+T++I LC E I +A LF ++ G +PN +TYN L++G +
Sbjct: 209 WDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQ 268
Query: 135 TGHTIVALNLFEE-MASGNGEFGV------EGFV-----DKAKELFLQMKDENINPDVVT 182
A+ L++E + SG V +GF +AK +FL+M + P V
Sbjct: 269 RDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPV 328
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S++ G + + EA L EM G+ P+ T ++++ LC G+M A R L +
Sbjct: 329 YNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQ 388
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ GV NA YN L+D +C G + A M +G V SYS LI+G+ K +++
Sbjct: 389 EDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQ 448
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+++Y EM++KGI+P+VV Y L + ++ AF+L EM +G++ + T +
Sbjct: 449 IAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLV 508
Query: 363 DGLCKNSYIVEAVELFRTLRILKCE 387
DGLC+ + + EAV LKC
Sbjct: 509 DGLCRENRVQEAVRFVMEYSGLKCS 533
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 195/407 (47%), Gaps = 34/407 (8%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
++D M+ + P V ++ + L + LF + G+ P+ YTYN+L++
Sbjct: 208 VWDQMVAQQIDPN-VVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGH 266
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ V+ V+ +L+S PNAV FT+LI G C R EA +F ++ FG P V
Sbjct: 267 CQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTV 326
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN---GEFG----VEGFVDKAK----ELFLQ- 170
YN+L++G +R+G+ AL L++EM EF V G D + + FLQ
Sbjct: 327 PVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQG 386
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
++++ +N + Y ++I +C + EA M + G++PNVV+++ ++D K GK
Sbjct: 387 VQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGK 446
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
M A + M+ G+ PN Y L+ G G ++ A L M G + + S+
Sbjct: 447 MQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSV 506
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIK-------------------PDVVIYNTLFVVLF 331
L++G C+ ++ A+ E G+K P+ VIY TL L+
Sbjct: 507 LVDGLCRENRVQEAVRFVMEY--SGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLY 564
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
Q A KLF M++ G+ D++TY I G C Y++ A+ L+
Sbjct: 565 LDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLY 611
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 171/357 (47%), Gaps = 27/357 (7%)
Query: 43 LNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 102
L+ST P +L+ +MG + V R LR+ P +++ GL R
Sbjct: 111 LSSTSTTP-APALGVLVIALSQMGLLDEALYVFRR-LRT--LPALPACNAVLDGLVKARR 166
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVD 162
A LF ++ G P+V TYNTLIN +G V
Sbjct: 167 PGCAWELFDEMLRRGLVPSVVTYNTLINACR-----------------------FQGTVA 203
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
KA+E++ QM + I+P+VVTYT++I C +A+ L M + G+QPN T+NV+M
Sbjct: 204 KAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLM 263
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
C+ ++ A L +++ G+ PNA ++ TL+DGFC R + AK +F+ M G
Sbjct: 264 SGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVA 323
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
TV Y+ L++G ++ + AL+LY EM G+ PD + + L + Q+ A +
Sbjct: 324 PTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRF 383
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+Q DGV + Y ID C+ + EA+ + + E ++ +Y+ LIDG
Sbjct: 384 LQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDG 440
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 164/387 (42%), Gaps = 26/387 (6%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
S P + +L L++ D L +F+RL + P L N +++ K R +
Sbjct: 115 STTPAPALGVLVIALSQMGLLDEALYVFRRLRT---LPALPACNAVLDGLVKARRPGCAW 171
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+ +LR P+ VT+ +LI + + +A ++ ++ +PNV TY T+I L
Sbjct: 172 ELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICAL 231
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
EG + A+ LF MK+ + P+ TY ++ G C
Sbjct: 232 CE-----------------------EGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQ 268
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
+D N A L E++ G+ PN V F ++D CK + EA + M + GV P V
Sbjct: 269 RDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPV 328
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
YN+LMDG +G A L+ M +G F+ SI++ G C ++ A +
Sbjct: 329 YNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQ 388
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
G+ + YN L I +E A M G+ + +Y + IDG K +
Sbjct: 389 EDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQ 448
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDG 399
A+ ++ + E ++ Y LI G
Sbjct: 449 IAMAIYTEMVAKGIEPNVVTYTALIHG 475
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 120/302 (39%), Gaps = 66/302 (21%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYT-------------------- 54
P V +N L ++ + L+L++ + GL PD +T
Sbjct: 324 PTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRF 383
Query: 55 ---------------YNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
YN LI+ +C++G + R+ PN V+++SLI G
Sbjct: 384 LQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSK 443
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG------ 153
++ A A++T++ G EPNV TY LI+G + G A L +EM NG
Sbjct: 444 RGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIE-NGISPNAI 502
Query: 154 --EFGVEGF-----VDKAKELFLQ-----------------MKDENINPDVVTYTSVIRG 189
V+G V +A ++ +++E + P+ V Y ++I G
Sbjct: 503 TVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYG 562
Query: 190 FCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
EA L M G+ P+ T+ +++ C G + A L M++IGV+P
Sbjct: 563 LYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPT 622
Query: 250 AF 251
+
Sbjct: 623 RY 624
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 182/385 (47%), Gaps = 7/385 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ + L + LF+ + GL D+YTY I+++ FCK G +
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ TPN VT+T+LI ++ A LF + GC PN+ TY+ LI+G +
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G A +FE M V+ + F Q D + P+VVTY +++ GFC ++
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMY-------FKQYDDNSERPNVVTYGALLDGFCKSH 653
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EA+ LL M +G +PN + ++ ++D LCK GK+DEA + M + G + Y+
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L+D + R + A ++ M C V Y+ +I+G CK + + A L M K
Sbjct: 714 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 773
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G +P+VV Y + I ++E +L + M GVA + TYR ID CKN + A
Sbjct: 774 GCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVA 833
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
L ++ Y +I+G
Sbjct: 834 HNLLEEMKQTHWPTHTAGYRKVIEG 858
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 186/419 (44%), Gaps = 36/419 (8%)
Query: 15 PPVCSFNILFGCLAKNKH------YDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV 68
P +NIL G + +K D + + + G+ + + C C G+
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464
Query: 69 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTL 128
F V+ ++ F P+ T++ ++ LC S++ A LF +++ G +V+TY +
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 129 INGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENI 176
++ + G A F EM V + V A ELF M E
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMM-----------------DQGVQPNVVTFN 219
P++VTY+++I G C A +A C + E M D +PNVVT+
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKA-CQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYG 643
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
++D CK+ +++EA +LLD M G PN VY+ L+DG C G+++ A+E+ M
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH 703
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G T+++YS LI+ Y K K + A + +ML P+VVIY + L ++ + + A
Sbjct: 704 GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEA 763
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
+KL M+ G + TY IDG I +EL + + Y LID
Sbjct: 764 YKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 190/437 (43%), Gaps = 63/437 (14%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L K K LF+ + S G P++ TY+ LI+ CK G+V +
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI 610
Query: 75 LGRILRS----------------CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC 118
R+ S PN VT+ +L+ G C R+ EA L + + GC
Sbjct: 611 FERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 670
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE---FGVEGFVDK---------AKE 166
EPN Y+ LI+GL + G A + EM+ + +D+ A +
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 730
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
+ +M + + P+VV YT +I G C +EA L+ M ++G QPNVVT+ ++D
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMGCTHT- 284
GK++ LL+ M GV PN Y L+D C G ++ A L M ++ THT
Sbjct: 791 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850
Query: 285 -------------------------------VFSYSILINGYCKNKEIEGALSLYGEM-- 311
+ Y +LI+ K + +E AL L E+
Sbjct: 851 GYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 910
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
S + YN+L L ++VE AF+LF EM + GV + ++ + I GL +NS I
Sbjct: 911 FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKI 970
Query: 372 VEAVELFRTLRILKCEL 388
EA+ L + + C L
Sbjct: 971 SEALLLLDFISHMVCPL 987
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 194/455 (42%), Gaps = 72/455 (15%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L K D+ + + ++ L D +T CK+G+ +
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY--------- 125
+ F P+ V +T LI GLC S EA ++R C PNV TY
Sbjct: 293 ---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349
Query: 126 --------------------------NTLINGLYRTGHTIVALNLFEEMAS--------- 150
N+L++ +G A L ++M
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVV 409
Query: 151 ---------GNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
G+ + +D A++ + +M + + + +S R C A + +A
Sbjct: 410 YNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFS 469
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
++ EM+ QG P+ T++ +++ LC KM+ A L + M + G+ + + Y ++D FC
Sbjct: 470 VIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 529
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
G + +A++ F M +GCT V +Y+ LI+ Y K K++ A L+ MLS+G P++V
Sbjct: 530 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIV 589
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEM--QRDGVAADTW--------------TYRTFIDGL 365
Y+ L + QVE+A ++F+ M +D D + TY +DG
Sbjct: 590 TYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGF 649
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
CK+ + EA +L + + CE + Y+ LIDGL
Sbjct: 650 CKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 684
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 159/362 (43%), Gaps = 21/362 (5%)
Query: 56 NILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-----F 110
N+L+ C+ G S LGR+ F P+ T+ LI+ R+ A+ +
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALN-------LFEEMASGNGEFGVEGFVDK 163
LR+ G F Y+ G +R T+V + ++ SG E ++
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCE---ASLFEE 320
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
A + +M+ + P+VVTY++++ G K +L MM +G P+ FN ++
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR------VNRAKELFVSME 277
C +G A +LL M++ G P VYN L+ C ++ A++ + M
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEML 440
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
+ G + S C + E A S+ EM+ +G PD Y+ + L ++E
Sbjct: 441 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
AF LF+EM+R G+ AD +TY +D CK I +A + F +R + C ++ Y LI
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560
Query: 398 DG 399
Sbjct: 561 HA 562
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 135/314 (42%), Gaps = 16/314 (5%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
++M P ++ L L K D + ++ G LYTY+ LI+ + K+ R
Sbjct: 665 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR 724
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
VL ++L + PN V +T +I GLC + EA L + GC+PNV TY
Sbjct: 725 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 784
Query: 128 LINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDEN 175
+I+G G L L E M S G +D A L +MK +
Sbjct: 785 MIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH 844
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
Y VI GF ++ E+ LL E+ P + + +++D L K +++ A
Sbjct: 845 WPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMAL 902
Query: 236 RLLDLMIQIGVR--PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
RLL+ + + YN+L++ CL +V A +LF M G + S+ LI
Sbjct: 903 RLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIK 962
Query: 294 GYCKNKEIEGALSL 307
G +N +I AL L
Sbjct: 963 GLFRNSKISEALLL 976
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 29/241 (12%)
Query: 7 MLNMRPSPPPVCSFNIL---FGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
M+ + P V ++ + FG + K +T L L +R+ S G+ P+ TY +LI+ C
Sbjct: 769 MMEEKGCQPNVVTYTAMIDGFGMIGK---IETCLELLERMGSKGVAPNYVTYRVLIDHCC 825
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K G + +L + ++ + + + +I+G E +E+ L ++ P +
Sbjct: 826 KNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLS 883
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
Y LI+ L + +AL L EE+A+ + VD + TY
Sbjct: 884 VYRLLIDNLIKAQRLEMALRLLEEVATFSAT-----LVDYSS----------------TY 922
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
S+I C AN A L EM +GV P + +F ++ L +N K+ EA LLD +
Sbjct: 923 NSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISH 982
Query: 244 I 244
+
Sbjct: 983 M 983
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 62/160 (38%), Gaps = 7/160 (4%)
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS--YSILINGYCKNKE 300
QIG + A VYN L+D +E + VF ++L+ +C+N
Sbjct: 158 QIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDD--KEVFGEFLNVLVRKHCRNGS 215
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
AL G + +P YN L + +++ A + EM + D +T R
Sbjct: 216 FSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRC 275
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
F LCK EA+ L T + D Y LI GL
Sbjct: 276 FAYSLCKVGKWREALTLVETENFVP---DTVFYTKLISGL 312
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 190/397 (47%), Gaps = 12/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N + L K Y + + + GL PD TYN L+ C+ S +
Sbjct: 186 PSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEI 245
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
G +LR P+ V+F+SLI + +A F ++ FG P+ Y L++G R
Sbjct: 246 FGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCR 305
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G+ + AL + +EM V E + A +LF +M + PD T
Sbjct: 306 NGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYT 365
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+T++I G C + +A L M + ++P++V +N ++D CK G+M++AS L D MI
Sbjct: 366 FTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMI 425
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ PN Y L++ +C G V+ A L+ M G T+ + + +I GYC++ +
Sbjct: 426 SRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSS 485
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A G M++KG+ PD + YNTL +++AF ++M+++G+ D TY +
Sbjct: 486 KADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVM 545
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+G C+ + EA + R + D Y LI+G
Sbjct: 546 NGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALING 582
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 190/395 (48%), Gaps = 12/395 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V + NI+ L K+ +D V S + G++ D+ TYN LI +C+ G + F ++
Sbjct: 118 VYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMN 177
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ P+ T+ ++I GLC + R A + ++ G P+ TYNTL+ R
Sbjct: 178 SMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRD 237
Query: 137 HTIVALNLFEEM------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
+ A +F EM +S F +D+A F MK + PD V YT
Sbjct: 238 NFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYT 297
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
++ G+C + EA + EM++QG +V+ +N I++ LCK + +A +L D M++
Sbjct: 298 VLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVER 357
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G P+ + + TL+ G C G + +A LF +M + +Y+ LI+G+CK E+E A
Sbjct: 358 GALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKA 417
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L+ M+S+ I P+ + Y L + V AF+L+D M G+ T T I G
Sbjct: 418 SELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKG 477
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
C++ +A E + D +YN LI+G
Sbjct: 478 YCRSGDSSKADEFLGRMIAKGVAPDHISYNTLING 512
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 179/372 (48%), Gaps = 24/372 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF ML + P + SF+ L ++N+H D L F+ + GL PD Y +L++ +
Sbjct: 245 IFGEMLR-QGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGY 303
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ G + + +L + + + +++ GLC E + +A LF ++ G P+
Sbjct: 304 CRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDF 363
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+T+ TLI+G + G+ AL+LF M NI PD+V
Sbjct: 364 YTFTTLIHGHCQDGNMTKALSLFGTMTQ-----------------------RNIKPDIVA 400
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I GFC + +A L M+ + + PN +T+ ++++ C G + EA RL D+MI
Sbjct: 401 YNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMI 460
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G++P NT++ G+C +G ++A E M + G SY+ LING+ + ++
Sbjct: 461 EKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMD 520
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A +M +G+ PD++ YN + +++ A + +M G+ D TY I
Sbjct: 521 KAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALI 580
Query: 363 DGLCKNSYIVEA 374
+G + EA
Sbjct: 581 NGHVTQDNLNEA 592
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 187/373 (50%), Gaps = 12/373 (3%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
N L G L K + + + + +G+ ++YT NI++N CK G+ L +
Sbjct: 87 NSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEG 146
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
+ + VT+ +LI C E + EA + + G +P++FTYN +INGL + G
Sbjct: 147 NGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYAR 206
Query: 141 ALNLFEEM--------ASGNGEFGVEG----FVDKAKELFLQMKDENINPDVVTYTSVIR 188
A + EM + VE +AKE+F +M + + PD+V+++S+I
Sbjct: 207 AKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIA 266
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
F ++A +M G+ P+ V + V+M C+NG M EA ++ D M++ G
Sbjct: 267 VFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVL 326
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
+ YNT+++G C + A +LF M G ++++ LI+G+C++ + ALSL+
Sbjct: 327 DVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLF 386
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
G M + IKPD+V YNTL ++ ++E+A +L+D M + + TY I+ C
Sbjct: 387 GTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSV 446
Query: 369 SYIVEAVELFRTL 381
++ EA L+ +
Sbjct: 447 GHVSEAFRLWDVM 459
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 181/380 (47%), Gaps = 23/380 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F++L + + F+ L S G + N L+ K+ V + V ++
Sbjct: 51 FDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVV 110
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
RS N T ++ LC + + + + +++ G ++ TYNTLI
Sbjct: 111 RSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLI---------- 160
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
G + EG +++A E+ M D+ + P + TY ++I G C + A
Sbjct: 161 -------------GAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARA 207
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
K +LIEM++ G+ P+ T+N ++ E C+ EA + M++ GV P+ +++L+
Sbjct: 208 KGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAV 267
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
F +++A F M+ G Y++L++GYC+N + AL + EML +G D
Sbjct: 268 FSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLD 327
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
V+ YNT+ L + + A KLFDEM G D +T+ T I G C++ + +A+ LF
Sbjct: 328 VIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFG 387
Query: 380 TLRILKCELDIRAYNCLIDG 399
T+ + DI AYN LIDG
Sbjct: 388 TMTQRNIKPDIVAYNTLIDG 407
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 157/320 (49%), Gaps = 24/320 (7%)
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
+C T N V F LI+ ++ E F LR G ++ N+L+ GL +
Sbjct: 43 NCGTNNLV-FDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKID---- 97
Query: 141 ALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
+V+ A E+ ++ I +V T ++ C +++ K
Sbjct: 98 -------------------WVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVK 138
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
L EM G+ ++VT+N ++ C+ G ++EA +++ M G++P+ F YN +++G
Sbjct: 139 SFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGL 198
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
C GR RAK + + M ++G + +Y+ L+ C+ A ++GEML +G+ PD+
Sbjct: 199 CKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDL 258
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
V +++L V +++A F +M++ G+ D Y + G C+N ++EA+++
Sbjct: 259 VSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDE 318
Query: 381 LRILKCELDIRAYNCLIDGL 400
+ C LD+ AYN +++GL
Sbjct: 319 MLEQGCVLDVIAYNTILNGL 338
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P S+N L + + D ++ GL PD+ TYN+++N FC+ GR+ +
Sbjct: 500 APDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAEL 559
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
VL +++ P+ T+T+LI G + + EA ++ G P+
Sbjct: 560 VLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 53/127 (41%)
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
E VS C + +LI Y + +++ + + SKG + N+L L
Sbjct: 34 EALVSSMCGNCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGL 93
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
+I VE A+++ E+ R G+ + +T ++ LCK+ + + D+
Sbjct: 94 VKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADM 153
Query: 391 RAYNCLI 397
YN LI
Sbjct: 154 VTYNTLI 160
>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like, partial [Brachypodium distachyon]
Length = 907
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 195/398 (48%), Gaps = 25/398 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M S + S N L L + T +++F+++ G PD +T I+ +
Sbjct: 116 VFDEM-GKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAY 174
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ GRV+H L + N V + +++ G C + A L L+V G PNV
Sbjct: 175 CRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNV 234
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKD-ENINPDVV 181
TY L+ G + EG +++A+++ ++K+ E I D V
Sbjct: 235 VTYTLLVKGYCK-----------------------EGRMEEAEKVVKEIKENEKIVIDEV 271
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y ++I G+C +A + EM+D GVQ N+ +N +++ CK G+M E +LL
Sbjct: 272 AYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQAN 331
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
GV + + YNTL+DG+C G + +A E M G T T +Y+ L+NG+C I
Sbjct: 332 EYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAI 391
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ AL L+ ML +G+ P+ + +TL F+ + E+A L+ E G+A + T T
Sbjct: 392 DDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTV 451
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I+GLCKN + EA ELF ++ C D Y LIDG
Sbjct: 452 INGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDG 489
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 166/357 (46%), Gaps = 21/357 (5%)
Query: 39 LFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRS-CFTPNAVTFTSLIKGL 97
L L GL P++ TY +L+ +CK GR+ V+ I + + V + +LI G
Sbjct: 221 LLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGY 280
Query: 98 CAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV 157
C R+ +A + ++ G + N+F YNT+ING + G + E++ N GV
Sbjct: 281 CQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGR----MGEVEKLLQANEYRGV 336
Query: 158 ----------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
+GF+ KA E M +TY +++ GFC ++A
Sbjct: 337 NLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALK 396
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
L M+ +GV PN ++ + ++D K GK ++A L + G+ N NT+++G C
Sbjct: 397 LWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLC 456
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
R+ A+ELF M+ C +Y LI+GYCK ++ A + EM + G P V
Sbjct: 457 KNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVE 516
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
++N+ LF Q + + EM G++ +T TY I G CK + +A L+
Sbjct: 517 MFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILY 573
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 172/414 (41%), Gaps = 73/414 (17%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH------ 70
V + N + L KN+ LF R+ D TY LI+ +CK+G +
Sbjct: 445 VVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRI 504
Query: 71 -----GFVVLGRILRSCFT------------------------PNAVTFTSLIKGLCAES 101
GFV + S T PN VT+ +LI G C E
Sbjct: 505 EMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEG 564
Query: 102 RIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVA-------------------- 141
+ +A L+ ++ G +PN+F + L++ YR G A
Sbjct: 565 NLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSAST 624
Query: 142 ------LNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTY 183
++ E +A GN + G V A+ LF +K + PD TY
Sbjct: 625 LNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTY 684
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
+S+I G + + A L EM+ + PN+VT+N ++ LCK+ + A L + +
Sbjct: 685 SSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQS 744
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G+ PNA YNTL+DG C G A +L M G TVF+Y+ILI+G C +E
Sbjct: 745 KGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEE 804
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
A+ L +M+ + P+ + Y TL ++ KL++EM G+ WT
Sbjct: 805 AIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICGLLPANWT 858
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 194/426 (45%), Gaps = 73/426 (17%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G+ D Y+YN L++ +C+ G ++ F ++R+ FT +T+ +L+ G C+ I +A
Sbjct: 335 GVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDA 394
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE-MASGNGEFGV------EG 159
L+ + G PN + +TL++G ++ G T ALNL++E +A G V G
Sbjct: 395 LKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVING 454
Query: 160 F-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD------ 208
+ +A+ELF +MK+ + D +TY ++I G+C D A + IEM +
Sbjct: 455 LCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPS 514
Query: 209 -----------------------------QGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
+G+ PN VT+ ++ CK G + +A L
Sbjct: 515 VEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYF 574
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRA-------------KELFVSMESMG-CTHTV 285
M++ G++PN F+ + L+ F G+V+ A ++ S ++G H +
Sbjct: 575 EMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHII 634
Query: 286 FS------------YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
S ++I+I G CK + A +L+ ++ KG PD Y++L
Sbjct: 635 ESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSAS 694
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
++ AF L DEM + + TY + I GLCK+ + AV LF L+ + Y
Sbjct: 695 GSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITY 754
Query: 394 NCLIDG 399
N LIDG
Sbjct: 755 NTLIDG 760
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 188/469 (40%), Gaps = 76/469 (16%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNST-GLFPDLYTYNILINCFCK 64
+ L ++ P V ++ +L K + + K + + D Y LIN +C+
Sbjct: 223 HSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQ 282
Query: 65 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFT 124
GR+ V ++ + N + ++I G C R+ E L G + ++
Sbjct: 283 RGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYS 342
Query: 125 YNTLINGLYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQM 171
YNTL++G R G A + M NG F G +D A +L+ M
Sbjct: 343 YNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNG-FCSRGAIDDALKLWFLM 401
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ P+ ++ ++++ GF A +A L E + +G+ NVVT N +++ LCKN +M
Sbjct: 402 LKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRM 461
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV------ 285
EA L M + ++ Y TL+DG+C G + RA ++ + ME++G +V
Sbjct: 462 TEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSF 521
Query: 286 -----------------------------FSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+Y LI G+CK + A LY EM+ KG+
Sbjct: 522 ITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGL 581
Query: 317 KPDVVIYNTLFVVLFEIHQVERA----FKLFDEMQRDGVAADTWT--------------- 357
KP++ I + L + +V+ A KL D +A T
Sbjct: 582 KPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGN 641
Query: 358 -------YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ I GLCK + +A LF L++ D Y+ LI G
Sbjct: 642 HQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHG 690
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 109/223 (48%), Gaps = 12/223 (5%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+NI+ L K +LF+ L G PD +TY+ LI+ G + F + +L
Sbjct: 649 WNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEML 708
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+ TPN VT+ SLI GLC + A +LF KL+ G PN TYNTLI+G + G+T
Sbjct: 709 SARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTT 768
Query: 140 VALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVI 187
A L ++M + V +G++++A +L QM + N++P+ +TY ++I
Sbjct: 769 EAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLI 828
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+G+ + L EM G+ P T +V E N K
Sbjct: 829 QGYARCGNMKAITKLYNEMHICGLLPANWTGHVKQAEPVVNSK 871
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 106/256 (41%), Gaps = 36/256 (14%)
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
++ ++R A +A + EM G + + + N ++++L + G + A +
Sbjct: 94 AASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQ 153
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M G P+ F + +C GRV A + ME MG + +Y +++GYC+
Sbjct: 154 QMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIG 213
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLF------------------------VVLFEIH- 334
+ E A L + KG+ P+VV Y L +V+ E+
Sbjct: 214 QTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAY 273
Query: 335 -----------QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
++E A ++ DEM GV + + Y T I+G CK + E +L +
Sbjct: 274 GALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEY 333
Query: 384 LKCELDIRAYNCLIDG 399
LD +YN L+DG
Sbjct: 334 RGVNLDEYSYNTLVDG 349
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 185/364 (50%), Gaps = 13/364 (3%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
PD++ YN +I+ FCK R+ VL R+ R F+P+ VT +I C + +I A +
Sbjct: 42 PDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKV 101
Query: 110 FTKL-RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV----------- 157
F +L + C+P + TY LI G AL L +EM S E
Sbjct: 102 FEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLC 161
Query: 158 -EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
EG VD+A E + PDV+TY ++R W+E + + E+ +G +PNVV
Sbjct: 162 KEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVV 221
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
T+++++ LC++GK++E+ L+ +M + G+ P+A+ Y+ L+ FC G+++ A E M
Sbjct: 222 TYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCM 281
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
G + +Y+ ++ CKN + A+ ++G++ G P+V YNT+ L+
Sbjct: 282 ICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDR 341
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
RA + +M G+ D TY + I LC++ + EA+ L + + + +I +Y +
Sbjct: 342 YRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTV 401
Query: 397 IDGL 400
+ GL
Sbjct: 402 LLGL 405
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 179/382 (46%), Gaps = 23/382 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ +L P + ++ IL D L L + S GL PD +TYN++
Sbjct: 101 VFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGL 160
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G+V F + + P+ +T+ L++ L + + E +++ GCEPNV
Sbjct: 161 CKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNV 220
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TY+ LI+ L R G ++NL + MK++ + PD
Sbjct: 221 VTYSILISSLCRDGKIEESVNLVK-----------------------VMKEKGLTPDAYC 257
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I FC + A L M+ G P++V +N IM LCKNG D A + +
Sbjct: 258 YDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLD 317
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
++G PN YNT++ +G RA + M S G V +Y+ LI+ C++ ++
Sbjct: 318 EVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVD 377
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ L +MLS +P++V Y T+ + L + H+++ A ++ M +G + TY I
Sbjct: 378 EAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLI 437
Query: 363 DGLCKNSYIVEAVELFRTLRIL 384
+G+ + +A+EL +L I+
Sbjct: 438 EGIGFSGSRTQAMELANSLYIM 459
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 127/335 (37%), Gaps = 105/335 (31%)
Query: 171 MKDENINPDVVTYT----------------------------------SVIRGFCYANDW 196
M ++ PDV+ T +VI GFC AN
Sbjct: 1 MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHGKPDVFAYNAVISGFCKANRI 60
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK-------------------------- 230
AK +L M +G P+VVT N+++ C GK
Sbjct: 61 ESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTI 120
Query: 231 ----------MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+DEA +LLD M+ G+ P+ F YN + G C G+V+RA E ++ S G
Sbjct: 121 LIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRG 180
Query: 281 CTHTVF-----------------------------------SYSILINGYCKNKEIEGAL 305
C V +YSILI+ C++ +IE ++
Sbjct: 181 CKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESV 240
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
+L M KG+ PD Y+ L +++ A + D M DG D Y T + L
Sbjct: 241 NLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAAL 300
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
CKN AVE+F L + C ++ +YN ++ L
Sbjct: 301 CKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSAL 335
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 192/402 (47%), Gaps = 20/402 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N + L K L + S GL P+ TYNIL+ +CKMG + V
Sbjct: 241 PDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANV 300
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + ++ P+ T+ LI GLC E RI EA L ++ P+V +YNTLING
Sbjct: 301 IELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLE 360
Query: 135 TGHTIVALNLFEEMASGNGEFGV----------------EGFVDKAKELFLQMKDENINP 178
A L EEM+ E GV EG +D A +M++ +P
Sbjct: 361 WSKISEAFKLLEEMS----EKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSP 416
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D VTY ++I G+C A + EA + EM + ++ + VT N I+ LC+ K++EA +LL
Sbjct: 417 DCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLL 476
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
+ G + Y TL+ G+ G V+RA +L+ M+ + +Y+ +I G C+
Sbjct: 477 SSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQC 536
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+ E A+S E+L G+ PD YNT+ VE+AF+ ++M + D +T
Sbjct: 537 GKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTC 596
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ GLC + +A++LF T +D YN LI L
Sbjct: 597 NILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSL 638
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 192/391 (49%), Gaps = 35/391 (8%)
Query: 15 PPVCSFNI-LFGCLAKNKHYDTV--LSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P V +FNI ++G +NK D V L++ + N + PD TYN +++ CK GR+
Sbjct: 206 PNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCS---PDNVTYNTILDALCKKGRLGDA 262
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
+L + PN T+ L+ G C + EAA + + P+V+TYN LING
Sbjct: 263 RDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLING 322
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
L EG +++A +L +M++ + PDVV+Y ++I G
Sbjct: 323 LCN-----------------------EGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCL 359
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
+ +EA LL EM ++GV+PN VT N+++ CK GKMD+AS + M + G P+
Sbjct: 360 EWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCV 419
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF---SYSILINGYCKNKEIEGALSLY 308
YNTL++G+C G + A F +M+ MG + + + ++ C+ K++E A L
Sbjct: 420 TYNTLINGYCKAGNMGEA---FRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLL 476
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
+G D V Y TL V F+ V+RA KL+DEM+ + T TY I GLC+
Sbjct: 477 SSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQC 536
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+A+ L D YN ++ G
Sbjct: 537 GKTEQAISKLNELLESGLLPDETTYNTILHG 567
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 187/406 (46%), Gaps = 15/406 (3%)
Query: 10 MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCK---MG 66
+R + P + G ++ +FK++ L P+L T N L+N +
Sbjct: 128 LRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSH 187
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
VS ++ PN TF +I G C E++ +A + + C P+ TYN
Sbjct: 188 SVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYN 247
Query: 127 TLINGLYRTGHTIVALNLFEEMAS-----GNGEFGV-------EGFVDKAKELFLQMKDE 174
T+++ L + G A +L +M S + + G++ +A + M
Sbjct: 248 TILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQN 307
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
N+ PDV TY +I G C EA L EM + + P+VV++N +++ + K+ EA
Sbjct: 308 NLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEA 367
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+LL+ M + GV+PNA +N ++ +C G+++ A ME G + +Y+ LING
Sbjct: 368 FKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLING 427
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
YCK + A EM K +K D V NT+ L ++E A+KL ++ G D
Sbjct: 428 YCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFID 487
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+Y T I G K+ + A++L+ ++ + YNC+I GL
Sbjct: 488 EVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGL 533
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 192/456 (42%), Gaps = 70/456 (15%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N+L L + L + + L PD+ +YN LIN + ++S F +
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + PNAVT ++K C E ++ +A+ TK+ G P+ TYNTLING +
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430
Query: 135 TGHTIVALNLFEEMASGNGE---------------------------------------- 154
G+ A +EM N +
Sbjct: 431 AGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVS 490
Query: 155 FGV-------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
+G +G VD+A +L+ +MK++ I P VTY +I G C +A L E++
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELL 550
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+ G+ P+ T+N I+ C+ G +++A + + M++ +P+ F N L+ G C+ G +
Sbjct: 551 ESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLE 610
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
+A +LF + S G +Y+ LI CK ++ A +L EM K + PD YN +
Sbjct: 611 KALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAII 670
Query: 328 VVLFEIHQVERAFKLFDEMQRDG-----------------------VAADTWTYRTFIDG 364
L + ++ A + +M G + + Y +I
Sbjct: 671 TALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKE 730
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LC +A+ +F + +D Y L+DGL
Sbjct: 731 LCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGL 766
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 54/144 (37%), Gaps = 23/144 (15%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N L L K D +L + L PD YTYN +I GR+ + ++
Sbjct: 630 TYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKM 689
Query: 79 LRSCFTPNAV-----------------------TFTSLIKGLCAESRIMEAAALFTKLRV 115
L P V ++ IK LC E + +A +F + +
Sbjct: 690 LEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQ 749
Query: 116 FGCEPNVFTYNTLINGLYRTGHTI 139
G + TY L++GL + +I
Sbjct: 750 KGITVDKSTYINLMDGLIKRRKSI 773
>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 191/381 (50%), Gaps = 23/381 (6%)
Query: 38 SLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 97
++F +++ G++PD TY +I +C+ G V + ++ F + T T +I
Sbjct: 817 NVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAF 876
Query: 98 CAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV 157
C +S + A F K+ G PN+ Y+++I+GL + G A L EEM + V
Sbjct: 877 CEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNV 936
Query: 158 ------------EGFVDKAKELFLQM-KDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
+G+ ++A LFL++ + +N P+V TYT++I G+C + A+ L
Sbjct: 937 YTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFE 996
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
M +QG+ PN T+ ++D CK G +A L++LM G PN YN+++DG C G
Sbjct: 997 RMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRG 1056
Query: 265 RVNRAKELFVS-----MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
R A +L + +E+ G T Y+ILI+ CK ++ AL +M G +PD
Sbjct: 1057 RAEEAFKLLNTGFQNQIEADGVT-----YTILISEQCKRADMNQALVFLNKMFKVGFQPD 1111
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
+ +Y TL + ++ + KLFDE+ + G+A TY + I G C+ + AV+ F+
Sbjct: 1112 IHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQ 1171
Query: 380 TLRILKCELDIRAYNCLIDGL 400
+ C D +Y LI GL
Sbjct: 1172 KMSDHGCAPDSISYGALISGL 1192
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 171/343 (49%), Gaps = 24/343 (6%)
Query: 40 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
F ++ GL P+L Y+ +I+ CK G V F +L ++++ + PN T TSLI GLC
Sbjct: 889 FHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCK 948
Query: 100 ESRIMEAAALFTKL-RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE 158
+ A LF KL R +PNV TY +I+G + E
Sbjct: 949 KGWTERAFRLFLKLIRSDNYKPNVHTYTAMISG-----------------------YCKE 985
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
+ +A+ LF +MK++ + P+ TYT++I G C A ++++A L+ M ++G PN T+
Sbjct: 986 EKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTY 1045
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
N I+D LCK G+ +EA +LL+ Q + + Y L+ C +N+A M
Sbjct: 1046 NSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFK 1105
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
+G + Y+ LI +C+ ++ + L+ E++ G+ P Y ++ +V
Sbjct: 1106 VGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSL 1165
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
A K F +M G A D+ +Y I GLCK S + EA +L+ T+
Sbjct: 1166 AVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTM 1208
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 180/387 (46%), Gaps = 27/387 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +++ + L K L + + G P++YT+ LI+ CK G F +
Sbjct: 899 PNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRL 958
Query: 75 LGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+++RS + PN T+T++I G C E ++ A LF +++ G PN TY TLI+G
Sbjct: 959 FLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHC 1018
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ G+ KA EL M +E P+ TY S++ G C
Sbjct: 1019 KAGN-----------------------FSKAYELMELMSNEGFFPNTCTYNSIVDGLCKR 1055
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
EA LL ++ + VT+ +++ E CK M++A L+ M ++G +P+ +Y
Sbjct: 1056 GRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLY 1115
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
TL+ FC + +++LF + +G T +Y+ +I GYC+ K++ A+ + +M
Sbjct: 1116 TTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSD 1175
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
G PD + Y L L + +++ A +L+D M G++ T T CK
Sbjct: 1176 HGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFAS 1235
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A+ + L L +L IR + LI L
Sbjct: 1236 AMVI---LERLNKKLWIRTVHTLIRKL 1259
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 126/274 (45%), Gaps = 36/274 (13%)
Query: 160 FVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ---------- 209
V+ A +F +M + PD TY +I G+C + EA + EMM++
Sbjct: 811 LVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLT 870
Query: 210 -------------------------GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
G+ PN++ ++ ++ LCK G + +A LL+ M++
Sbjct: 871 LIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKN 930
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMGCTHTVFSYSILINGYCKNKEIEG 303
G +PN + + +L+ G C G RA LF+ + S V +Y+ +I+GYCK +++
Sbjct: 931 GWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSR 990
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A L+ M +G+ P+ Y TL + +A++L + M +G +T TY + +D
Sbjct: 991 AEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVD 1050
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
GLCK EA +L T + E D Y LI
Sbjct: 1051 GLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILI 1084
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 134/319 (42%), Gaps = 15/319 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + K + LF+R+ GL P+ TY LI+ CK G S + +
Sbjct: 970 PNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYEL 1029
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + F PN T+ S++ GLC R EA L E + TY LI+ +
Sbjct: 1030 MELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCK 1089
Query: 135 TGHTIVALNLFEEM------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
AL +M + F + + +++LF ++ + P T
Sbjct: 1090 RADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKET 1149
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YTS+I G+C + A +M D G P+ +++ ++ LCK ++DEA +L D MI
Sbjct: 1150 YTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMI 1209
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ P TL +C T A V +E + + + LI C K++
Sbjct: 1210 DKGLSPCEVTRVTLTYEYCKTEDFASA---MVILERLNKKLWIRTVHTLIRKLCCEKKVA 1266
Query: 303 GALSLYGEMLSKGIKPDVV 321
A + ++L K + D V
Sbjct: 1267 LAALFFHKLLDKEVNVDRV 1285
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 100/203 (49%), Gaps = 1/203 (0%)
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
EA ++++M +QG+ N I+ + ++ A + D M GV P++ Y ++
Sbjct: 779 EAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYII 838
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
G+C G V A M G + +++I +C+ + A+ + ++ G+
Sbjct: 839 VGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLS 898
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
P+++ Y+++ L + V++AF+L +EM ++G + +T+ + I GLCK + A L
Sbjct: 899 PNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRL 958
Query: 378 F-RTLRILKCELDIRAYNCLIDG 399
F + +R + ++ Y +I G
Sbjct: 959 FLKLIRSDNYKPNVHTYTAMISG 981
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 60/141 (42%)
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
F G++ A ++ + M + G T + +I + + +E A +++ EM ++G+ PD
Sbjct: 771 FAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPD 830
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
Y + V V A + EM G D T I C+ S + AV F
Sbjct: 831 SCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFH 890
Query: 380 TLRILKCELDIRAYNCLIDGL 400
+ + ++ Y+ +I GL
Sbjct: 891 KVTKMGLSPNLINYSSMISGL 911
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 192/402 (47%), Gaps = 20/402 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N + L K L + S GL P+ TYNIL+ +CKMG + V
Sbjct: 241 PDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANV 300
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + ++ P+ T+ LI GLC E RI EA L ++ P+V +YNTLING
Sbjct: 301 IELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLE 360
Query: 135 TGHTIVALNLFEEMASGNGEFGV----------------EGFVDKAKELFLQMKDENINP 178
A L EEM+ E GV EG +D A +M++ +P
Sbjct: 361 WSKISEAFKLLEEMS----EKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSP 416
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D VTY ++I G+C A + EA + EM + ++ + VT N I+ LC+ K++EA +LL
Sbjct: 417 DCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLL 476
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
+ G + Y TL+ G+ G V+RA +L+ M+ + +Y+ +I G C+
Sbjct: 477 SSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQC 536
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+ E A+S E+L G+ PD YNT+ VE+AF+ ++M + D +T
Sbjct: 537 GKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTC 596
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ GLC + +A++LF T +D YN LI L
Sbjct: 597 NILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSL 638
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 192/391 (49%), Gaps = 35/391 (8%)
Query: 15 PPVCSFNI-LFGCLAKNKHYDTV--LSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P V +FNI ++G +NK D V L++ + N + PD TYN +++ CK GR+
Sbjct: 206 PNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCS---PDNVTYNTILDTLCKKGRLGDA 262
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
+L + PN T+ L+ G C + EAA + + P+V+TYN LING
Sbjct: 263 RDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLING 322
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
L EG +++A +L +M++ + PDVV+Y ++I G
Sbjct: 323 LCN-----------------------EGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCL 359
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
+ +EA LL EM ++GV+PN VT N+++ CK GKMD+AS + M + G P+
Sbjct: 360 EWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCV 419
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF---SYSILINGYCKNKEIEGALSLY 308
YNTL++G+C G + A F +M+ MG + + + ++ C+ K++E A L
Sbjct: 420 TYNTLINGYCKAGNMGEA---FRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLL 476
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
+G D V Y TL V F+ V+RA KL+DEM+ + T TY I GLC+
Sbjct: 477 SSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQC 536
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+A+ L D YN ++ G
Sbjct: 537 GKTEQAISKLNELLESGLLPDETTYNTILHG 567
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 187/406 (46%), Gaps = 15/406 (3%)
Query: 10 MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCK---MG 66
+R + P + G ++ +FK++ L P+L T N L+N +
Sbjct: 128 LRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSH 187
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
VS ++ PN TF +I G C E++ +A + + C P+ TYN
Sbjct: 188 SVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYN 247
Query: 127 TLINGLYRTGHTIVALNLFEEMAS-----GNGEFGV-------EGFVDKAKELFLQMKDE 174
T+++ L + G A +L +M S + + G++ +A + M
Sbjct: 248 TILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQN 307
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
N+ PDV TY +I G C EA L EM + + P+VV++N +++ + K+ EA
Sbjct: 308 NLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEA 367
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+LL+ M + GV+PNA +N ++ +C G+++ A ME G + +Y+ LING
Sbjct: 368 FKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLING 427
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
YCK + A EM K +K D V NT+ L ++E A+KL ++ G D
Sbjct: 428 YCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFID 487
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+Y T I G K+ + A++L+ ++ + YNC+I GL
Sbjct: 488 EVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGL 533
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/456 (25%), Positives = 191/456 (41%), Gaps = 70/456 (15%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N+L L + L + + L PD+ +YN LIN + ++S F +
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + PNAVT ++K C E ++ +A+ TK+ G P+ TYNTLING +
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430
Query: 135 TGHTIVALNLFEEMASGNGE---------------------------------------- 154
G+ A +EM N +
Sbjct: 431 AGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVS 490
Query: 155 FGV-------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
+G +G VD+A +L+ +MK++ I P VTY +I G C +A L E++
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELL 550
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+ G+ P+ T+N I+ C+ G +++A + + M++ +P+ F N L+ G C+ G +
Sbjct: 551 ESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLE 610
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
+A +LF + S G +Y+ LI CK ++ A +L EM K + PD YN +
Sbjct: 611 KALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAII 670
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADT-----------------------WTYRTFIDG 364
L + ++ A + +M G D Y +I
Sbjct: 671 TALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKE 730
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LC +A+ +F + +D Y L+DGL
Sbjct: 731 LCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGL 766
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 103/253 (40%), Gaps = 39/253 (15%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N + G L + + +S L +GL PD TYN +++ +C+ G V F
Sbjct: 521 PSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQF 580
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ + F P+ T L++GLC E + +A LF G + TYNTLI L +
Sbjct: 581 HNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCK 640
Query: 135 TGHTIVALNLFEEMASGNGEFGVE--------------GFVDKAKELFLQMKDENINPD- 179
G A NL EM E G + G + +A+E +M ++ PD
Sbjct: 641 EGRLDDAFNLLSEMEEK--ELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQ 698
Query: 180 ----------------------VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
V Y+ I+ C + +A + E +G+ + T
Sbjct: 699 VLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKST 758
Query: 218 FNVIMDELCKNGK 230
+ +MD L K K
Sbjct: 759 YINLMDGLIKRRK 771
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 55/144 (38%), Gaps = 23/144 (15%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N L L K D +L + L PD YTYN +I GR+ + ++
Sbjct: 630 TYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKM 689
Query: 79 LRSCFTPNAV-----------------------TFTSLIKGLCAESRIMEAAALFTKLRV 115
L P+ V ++ IK LC E + +A +F + +
Sbjct: 690 LEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQ 749
Query: 116 FGCEPNVFTYNTLINGLYRTGHTI 139
G + TY L++GL + +I
Sbjct: 750 KGITVDKSTYINLMDGLIKRRKSI 773
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 194/395 (49%), Gaps = 15/395 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ +FN L L K L ++ G+ P+L+TYN+ I C+ G + ++G
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ P+ +T+ +LI GLC S+ EA K+ G EP+ +TYNTLI G + G
Sbjct: 276 CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 137 HTIVALNLFEEMASGNG----EFGV---------EGFVDKAKELFLQMKDENINPDVVTY 183
+A + + A NG +F EG ++A LF + + I P+V+ Y
Sbjct: 336 MVQLAERIVGD-AVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
++I+G EA L EM ++G+ P V TFN++++ LCK G + +A L+ +MI
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G P+ F +N L+ G+ ++ A E+ M G V++Y+ L+NG CK + E
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFED 514
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
+ Y M+ KG P++ +N L L +++ A L +EM+ V D T+ T ID
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574
Query: 364 GLCKNSYIVEAVELFRTL-RILKCELDIRAYNCLI 397
G CKN + A LFR + K YN +I
Sbjct: 575 GFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIII 609
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 194/394 (49%), Gaps = 25/394 (6%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++ P P + N+++G +K + + L K +N GL PD YTYN LI +CK G
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNE-GLEPDSYTYNTLIAGYCKGG 335
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
V ++G + + F P+ T+ SLI GLC E A ALF + G +PNV YN
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 395
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
TLI GL G + A L EM+ ++ + P+V T+ +
Sbjct: 396 TLIKGLSNQGMILEAAQLANEMS-----------------------EKGLIPEVQTFNIL 432
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
+ G C ++A L+ M+ +G P++ TFN+++ KM+ A +LD+M+ GV
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGV 492
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+ + YN+L++G C T + E + +M GC +F+++IL+ C+ ++++ AL
Sbjct: 493 DPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALG 552
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD-GVAADTWTYRTFIDGL 365
L EM +K + PD V + TL + ++ A+ LF +M+ V++ T TY I
Sbjct: 553 LLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAF 612
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + A +LF+ + D Y ++DG
Sbjct: 613 TEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDG 646
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 185/376 (49%), Gaps = 12/376 (3%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 95
+++F+R++ P +++YN +++ G V R+ TP+ +FT +K
Sbjct: 95 AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154
Query: 96 GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM-ASG--- 151
C SR A L + GCE NV Y T++ G Y LF +M ASG
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214
Query: 152 -----NGEFGV---EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
N V +G V + ++L ++ + P++ TY I+G C + + A ++
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMV 274
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
+++QG +P+V+T+N ++ LCKN K EA L M+ G+ P+++ YNTL+ G+C
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG 334
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
G V A+ + G F+Y LI+G C E AL+L+ E L KGIKP+V++Y
Sbjct: 335 GMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
NTL L + A +L +EM G+ + T+ ++GLCK + +A L + +
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
Query: 384 LKCELDIRAYNCLIDG 399
DI +N LI G
Sbjct: 455 KGYFPDIFTFNILIHG 470
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 196/456 (42%), Gaps = 93/456 (20%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV------ 68
P V S+N + L + ++D ++ R+ G+ PD+Y++ I + FCK R
Sbjct: 109 PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRL 168
Query: 69 -----------------------------SHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
+ G+ + G++L S + TF L++ LC
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCK 228
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEG 159
+ + E L K+ G PN+FTYN I GL + G
Sbjct: 229 KGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE---------------------- 266
Query: 160 FVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 219
+D A + + ++ PDV+TY ++I G C + + EA+ L +M+++G++P+ T+N
Sbjct: 267 -LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS---- 275
++ CK G + A R++ + G P+ F Y +L+DG C G NRA LF
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385
Query: 276 -------------------------------MESMGCTHTVFSYSILINGYCKNKEIEGA 304
M G V +++IL+NG CK + A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L M+SKG PD+ +N L ++E A ++ D M +GV D +TY + ++G
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LCK S + +E ++T+ C ++ +N L++ L
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 541
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 158/346 (45%), Gaps = 58/346 (16%)
Query: 90 FTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
+ +K + ++ EA +F ++ + CEP VF+YN +++ L +
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDS-------------- 124
Query: 150 SGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
G+ D+A +++++M+D I PDV ++T ++ FC + + A LL M Q
Sbjct: 125 ---------GYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQ 175
Query: 210 GVQPNVV-----------------------------------TFNVIMDELCKNGKMDEA 234
G + NVV TFN ++ LCK G + E
Sbjct: 176 GCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKEC 235
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+LLD +I+ GV PN F YN + G C G ++ A + + G V +Y+ LI G
Sbjct: 236 EKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYG 295
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
CKN + + A G+M+++G++PD YNTL + V+ A ++ + +G D
Sbjct: 296 LCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPD 355
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+TYR+ IDGLC A+ LF + ++ YN LI GL
Sbjct: 356 QFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 145/308 (47%), Gaps = 24/308 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FNIL L K L K + S G FPD++T+NILI+ + ++ + +
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L + P+ T+ SL+ GLC S+ + + + GC PN+FT+N L+ L R
Sbjct: 484 LDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
AL L EE MK++++NPD VT+ ++I GFC
Sbjct: 544 YRKLDEALGLLEE-----------------------MKNKSVNPDAVTFGTLIDGFCKNG 580
Query: 195 DWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
D + A L +M + V + T+N+I+ + + A +L M+ + P+ + Y
Sbjct: 581 DLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTY 640
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
++DGFC TG VN + + M G ++ + +IN C + A + M+
Sbjct: 641 RLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQ 700
Query: 314 KGIKPDVV 321
KG+ P+ V
Sbjct: 701 KGLVPEAV 708
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 121/250 (48%), Gaps = 5/250 (2%)
Query: 154 EFGVEGFVDKAKELFLQMKDENINPDVV--TYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
+ G G + +E+ + M+ EN+ ++ Y ++ + EA + M
Sbjct: 49 KLGYYGKFEAMEEVLVDMR-ENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDC 107
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
+P V ++N IM L +G D+A ++ M G+ P+ + + M FC T R + A
Sbjct: 108 EPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALR 167
Query: 272 LFVSMESMGCTHTVFSYSILING-YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
L +M S GC V +Y ++ G Y +N + EG L+G+ML+ G+ + +N L VL
Sbjct: 168 LLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG-YELFGKMLASGVSLCLSTFNKLLRVL 226
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
+ V+ KL D++ + GV + +TY FI GLC+ + AV + L + D+
Sbjct: 227 CKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDV 286
Query: 391 RAYNCLIDGL 400
YN LI GL
Sbjct: 287 ITYNNLIYGL 296
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 182/385 (47%), Gaps = 7/385 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ + L + LF+ + GL D+YTY I+++ FCK G +
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ TPN VT+T+LI ++ A LF + GC PN+ TY+ LI+G +
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G A +FE M V+ + F Q D + P+VVTY +++ GFC ++
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMY-------FKQYDDNSERPNVVTYGALLDGFCKSH 653
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EA+ LL M +G +PN + ++ ++D LCK GK+DEA + M + G + Y+
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L+D + R + A ++ M C V Y+ +I+G CK + + A L M K
Sbjct: 714 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 773
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G +P+VV Y + I ++E +L + M GVA + TYR ID CKN + A
Sbjct: 774 GCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVA 833
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
L ++ Y +I+G
Sbjct: 834 HNLLEEMKQTHWPTHTAGYRKVIEG 858
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 186/419 (44%), Gaps = 36/419 (8%)
Query: 15 PPVCSFNILFGCLAKNKH------YDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV 68
P +NIL G + +K D + + + G+ + + C C G+
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464
Query: 69 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTL 128
F V+ ++ F P+ T++ ++ LC S++ A LF +++ G +V+TY +
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 129 INGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENI 176
++ + G A F EM V + V A ELF M E
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMM-----------------DQGVQPNVVTFN 219
P++VTY+++I G C A +A C + E M D +PNVVT+
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKA-CQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYG 643
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
++D CK+ +++EA +LLD M G PN VY+ L+DG C G+++ A+E+ M
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH 703
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G T+++YS LI+ Y K K + A + +ML P+VVIY + L ++ + + A
Sbjct: 704 GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEA 763
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
+KL M+ G + TY IDG I +EL + + Y LID
Sbjct: 764 YKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 186/427 (43%), Gaps = 63/427 (14%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L K K LF+ + S G P++ TY+ LI+ CK G+V +
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI 610
Query: 75 LGRILRS----------------CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC 118
R+ S PN VT+ +L+ G C R+ EA L + + GC
Sbjct: 611 FERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 670
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE---FGVEGFVDK---------AKE 166
EPN Y+ LI+GL + G A + EM+ + +D+ A +
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 730
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
+ +M + + P+VV YT +I G C +EA L+ M ++G QPNVVT+ ++D
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMGCTHT- 284
GK++ LL+ M GV PN Y L+D C G ++ A L M ++ THT
Sbjct: 791 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850
Query: 285 -------------------------------VFSYSILINGYCKNKEIEGALSLYGEM-- 311
+ Y +LI+ K + +E AL L E+
Sbjct: 851 GYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 910
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
S + YN+L L ++VE AF+LF EM + GV + ++ + I GL +NS I
Sbjct: 911 FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKI 970
Query: 372 VEAVELF 378
EA+ L
Sbjct: 971 SEALLLL 977
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 194/455 (42%), Gaps = 72/455 (15%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L K D+ + + ++ L D +T CK+G+ +
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY--------- 125
+ F P+ V +T LI GLC S EA ++R C PNV TY
Sbjct: 293 ---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349
Query: 126 --------------------------NTLINGLYRTGHTIVALNLFEEMAS--------- 150
N+L++ +G A L ++M
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVV 409
Query: 151 ---------GNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
G+ + +D A++ + +M + + + +S R C A + +A
Sbjct: 410 YNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFS 469
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
++ EM+ QG P+ T++ +++ LC KM+ A L + M + G+ + + Y ++D FC
Sbjct: 470 VIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 529
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
G + +A++ F M +GCT V +Y+ LI+ Y K K++ A L+ MLS+G P++V
Sbjct: 530 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIV 589
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEM--QRDGVAADTW--------------TYRTFIDGL 365
Y+ L + QVE+A ++F+ M +D D + TY +DG
Sbjct: 590 TYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGF 649
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
CK+ + EA +L + + CE + Y+ LIDGL
Sbjct: 650 CKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 684
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 159/362 (43%), Gaps = 21/362 (5%)
Query: 56 NILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-----F 110
N+L+ C+ G S LGR+ F P+ T+ LI+ R+ A+ +
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALN-------LFEEMASGNGEFGVEGFVDK 163
LR+ G F Y+ G +R T+V + ++ SG E ++
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCE---ASLFEE 320
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
A + +M+ + P+VVTY++++ G K +L MM +G P+ FN ++
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR------VNRAKELFVSME 277
C +G A +LL M++ G P VYN L+ C ++ A++ + M
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEML 440
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
+ G + S C + E A S+ EM+ +G PD Y+ + L ++E
Sbjct: 441 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
AF LF+EM+R G+ AD +TY +D CK I +A + F +R + C ++ Y LI
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560
Query: 398 DG 399
Sbjct: 561 HA 562
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 137/318 (43%), Gaps = 24/318 (7%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
++M P ++ L L K D + ++ G LYTY+ LI+ + K+ R
Sbjct: 665 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR 724
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
VL ++L + PN V +T +I GLC + EA L + GC+PNV TY
Sbjct: 725 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 784
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGV----------------EGFVDKAKELFLQM 171
+I+G G L L E M S GV G +D A L +M
Sbjct: 785 MIDGFGMIGKIETCLELLERMGSK----GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
K + Y VI GF ++ E+ LL E+ P + + +++D L K ++
Sbjct: 841 KQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRL 898
Query: 232 DEASRLLDLMIQIGVR--PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+ A RLL+ + + YN+L++ CL +V A +LF M G + S+
Sbjct: 899 EMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFC 958
Query: 290 ILINGYCKNKEIEGALSL 307
LI G +N +I AL L
Sbjct: 959 SLIKGLFRNSKISEALLL 976
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 109/244 (44%), Gaps = 29/244 (11%)
Query: 7 MLNMRPSPPPVCSFNIL---FGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
M+ + P V ++ + FG + K +T L L +R+ S G+ P+ TY +LI+ C
Sbjct: 769 MMEEKGCQPNVVTYTAMIDGFGMIGK---IETCLELLERMGSKGVAPNYVTYRVLIDHCC 825
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K G + +L + ++ + + + +I+G E +E+ L ++ P +
Sbjct: 826 KNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLS 883
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
Y LI+ L + +AL L EE+A+ + VD + TY
Sbjct: 884 VYRLLIDNLIKAQRLEMALRLLEEVATFSATL-----VDYSS----------------TY 922
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
S+I C AN A L EM +GV P + +F ++ L +N K+ EA LLD +
Sbjct: 923 NSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISH 982
Query: 244 IGVR 247
+ ++
Sbjct: 983 MEIQ 986
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 62/160 (38%), Gaps = 7/160 (4%)
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS--YSILINGYCKNKE 300
QIG + A VYN L+D +E + VF ++L+ +C+N
Sbjct: 158 QIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDD--KEVFGEFLNVLVRKHCRNGS 215
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
AL G + +P YN L + +++ A + EM + D +T R
Sbjct: 216 FSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRC 275
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
F LCK EA+ L T + D Y LI GL
Sbjct: 276 FAYSLCKVGKWREALTLVETENFVP---DTVFYTKLISGL 312
>gi|125563733|gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
Length = 618
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 195/374 (52%), Gaps = 12/374 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + N + L K V LF + G+ P + TYN LIN G V+ + V
Sbjct: 136 PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEV 195
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ PN VT+T++I LC E I +A LF +++ G PN++TYN L++ ++
Sbjct: 196 WDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFK 255
Query: 135 TGHTIVALNLFEEM-----ASGNGEFG--VEGF-----VDKAKELFLQMKDENINPDVVT 182
+ AL + ++ + F ++G + +AK +FL M + P V
Sbjct: 256 RDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPV 315
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S+I G + EA E++ + ++P+ T ++++ LC G+M A+R L++M
Sbjct: 316 YNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQ 375
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q G+ NA YN L+D +C +G ++ A M +G V +YS LI+G+ KN E+E
Sbjct: 376 QSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEME 435
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+++Y EM++KG++P+VV Y L + ++ AF L EM+ G+ ++ T +
Sbjct: 436 IAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLV 495
Query: 363 DGLCKNSYIVEAVE 376
DGLC+ + + +AV
Sbjct: 496 DGLCRENRVQDAVR 509
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 187/404 (46%), Gaps = 30/404 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
++D M+ R P V ++ + L + LF + G+ P+LYTYN L++
Sbjct: 195 VWDQMVARRIDPN-VVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSH 253
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K + H V +L+ PN V FT+LI GLC +RI EA +F + + P V
Sbjct: 254 FKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTV 313
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
YN+LI+G +R+G+ AL F+E+ KEL PD T
Sbjct: 314 PVYNSLIHGAFRSGYAQEALAFFQEIIR--------------KEL---------RPDEFT 350
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ V+RG C A L M G+ N +NV++DE CK+G +DEA M
Sbjct: 351 CSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMS 410
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
++GV PN Y++L+DG G + A ++ M + G V +Y+ LI+G+ KN +++
Sbjct: 411 EVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMD 470
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE------MQRDGVAADTW 356
A L EM KGI + + + L L ++V+ A + E +++ A++
Sbjct: 471 AAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSV 530
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY T I GL + EA F +R D Y +I GL
Sbjct: 531 TYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGL 574
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 161/343 (46%), Gaps = 26/343 (7%)
Query: 57 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF 116
+L+ +M V GR+ P +++ GL + LF ++
Sbjct: 111 VLVIALSQMALPDEALSVFGRLRE---LPALPACNAILDGLVKAHMLARVWELFDEMLGR 167
Query: 117 GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI 176
G P+V TYNTLIN +G V KA E++ QM I
Sbjct: 168 GMVPSVVTYNTLINACRH-----------------------QGDVAKAWEVWDQMVARRI 204
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
+P+VVTYT++I C + +A+ L +EM + G++PN+ T+N +M K + A
Sbjct: 205 DPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALV 264
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+++ G+ PN ++ TL+DG C R+ AK +F+ M TV Y+ LI+G
Sbjct: 265 FYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAF 324
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
++ + AL+ + E++ K ++PD + + L + Q++ A + + MQ+ G+A +
Sbjct: 325 RSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAA 384
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
Y ID CK+ + EA+ + + E ++ Y+ LIDG
Sbjct: 385 AYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDG 427
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 189/387 (48%), Gaps = 11/387 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ + L + LF+ + G+ PD+YTY ILI+ FCK G + +
Sbjct: 221 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 280
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ +P VT+T+LI ++ +A +F ++ GC PN TY L++GL +
Sbjct: 281 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 340
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKA-KELFLQMKDEN-INPDVVTYTSVIRGFCY 192
G+ A ++ ++ G D A + + +D + + P+VVTY +++ G C
Sbjct: 341 AGNISKAFEVYAKLI---------GTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCK 391
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
A+ + A LL M+ G +PN + ++ ++D CK GK+D A + M + G P+
Sbjct: 392 AHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHT 451
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
Y +L+D GR++ A ++ M CT V +Y+ +I+G C+ E E AL L M
Sbjct: 452 YTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLME 511
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
KG P+VV Y L L + +++ + LF +M R G + + TYR I+ LC +
Sbjct: 512 EKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLD 571
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDG 399
+A L ++ ++ Y C I G
Sbjct: 572 KARLLLGEMKQTYWPKYLQGYRCAIQG 598
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 180/391 (46%), Gaps = 39/391 (9%)
Query: 26 CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTP 85
CL +D L K + G PD TY+ +I C +V F++ + TP
Sbjct: 197 CLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTP 256
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
+ T+T LI C I +A LF ++R GC P V TY LI+ +
Sbjct: 257 DVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ-------- 308
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA---KCL 202
V +A ++F +M D P+ VTY +++ G C A + ++A
Sbjct: 309 ---------------VPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK 353
Query: 203 LIEMMDQG-------------VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
LI D + PNVVT+ ++D LCK K+D A LLD M+ G PN
Sbjct: 354 LIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPN 413
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
VY+ L+DGFC G+++ A+E+F+ M G +V +Y+ LI+ K+ ++ A+ +
Sbjct: 414 HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 473
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
+ML P+VV Y + L I + E+A KL M+ G + + TY IDGL K
Sbjct: 474 QMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAG 533
Query: 370 YIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I +++LF + C + Y LI+ L
Sbjct: 534 KIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 564
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 182/416 (43%), Gaps = 32/416 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L K K +F R+ G P+ TY L++ CK G +S F V
Sbjct: 291 PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 350
Query: 75 LGRIL----------------RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC 118
+++ R PN VT+ +L+ GLC ++ A L + GC
Sbjct: 351 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 410
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKE 166
EPN Y+ LI+G + G A +F +M V +G +D A +
Sbjct: 411 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 470
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
+ QM ++ P+VVTYT++I G C + +A LL M ++G PNVVT+ ++D L
Sbjct: 471 VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 530
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
K GK+D + L M + G PN Y L++ C G +++A+ L M+ +
Sbjct: 531 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 590
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
Y I G+ +K +L + EM S G P +Y L + ++E A +L EM
Sbjct: 591 GYRCAIQGF--SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEM 648
Query: 347 QR--DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
V D Y + I LC S + EA L+ + ++ + CLI GL
Sbjct: 649 MEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGL 704
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 175/389 (44%), Gaps = 33/389 (8%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
L + ++D +S R+ P++ TY L++ F K ++ ++ ++ PN
Sbjct: 52 LMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPN 111
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
F SL+ C E A L ++ GC P YN I +
Sbjct: 112 PSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSI-------------- 157
Query: 147 EMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
G + +D A++++ +M N + V + R C +++A L+ EM
Sbjct: 158 ---CGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEM 214
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
M +G P+ T++ ++ LC K+++A L M +GV P+ + Y L+D FC G +
Sbjct: 215 MRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLI 274
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+A+ LF M S+GC+ TV +Y+ LI+ Y K K++ A ++ M+ G +P+ V Y L
Sbjct: 275 EQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGAL 334
Query: 327 FVVLFEIHQVERAFKLFDEM----------------QRDGVAADTWTYRTFIDGLCKNSY 370
L + + +AF+++ ++ R +A + TY +DGLCK
Sbjct: 335 VDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHK 394
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ A EL + CE + Y+ LIDG
Sbjct: 395 VDHAHELLDAMLSSGCEPNHIVYDALIDG 423
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 153/380 (40%), Gaps = 67/380 (17%)
Query: 43 LNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 102
++ +G D +T + CK GR + L I R F + V T +I GL S
Sbjct: 1 MSESGFCMDRFTVGCFAHALCKEGRWADA---LDMIEREDFKLDTVLCTHMISGLMEASY 57
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVD 162
EA + ++R C PNV TY TL++G + +
Sbjct: 58 FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQ-----------------------LG 94
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
K + M E NP+ + S++ +C D+ A LL M G P V +N+ +
Sbjct: 95 WCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFI 154
Query: 223 DELCKN-----------------------------------------GKMDEASRLLDLM 241
+C GK D+A +L+ M
Sbjct: 155 GSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEM 214
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++ G P+ Y+ ++ C +V +A LF M+ +G T V++Y+ILI+ +CK I
Sbjct: 215 MRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLI 274
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A L+ EM S G P VV Y L + QV +A +F M G + TY
Sbjct: 275 EQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGAL 334
Query: 362 IDGLCKNSYIVEAVELFRTL 381
+DGLCK I +A E++ L
Sbjct: 335 VDGLCKAGNISKAFEVYAKL 354
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 124/293 (42%), Gaps = 21/293 (7%)
Query: 123 FTYNTLINGLYRTGHTIVALNLFE------------EMASGNGEFGVEGFVDKAKELFLQ 170
FT + L + G AL++ E M SG E + D+A +
Sbjct: 11 FTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLME---ASYFDEAMSFLHR 67
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M+ + P+VVTY +++ GF K ++ MM +G PN FN ++ C
Sbjct: 68 MRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKD 127
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR------VNRAKELFVSMESMGCTHT 284
A +LL+ M G P VYN + C + ++ A++++ M + C
Sbjct: 128 YAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLN 187
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
+ + C + + A L EM+ KG PD Y+ + L +VE+AF LF
Sbjct: 188 KVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQ 247
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
EM+ GV D +TY ID CK I +A LF +R + C + Y LI
Sbjct: 248 EMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALI 300
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 90/219 (41%), Gaps = 16/219 (7%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++ + P V ++ L L K D L LF +++ G P+ TY +LIN C G
Sbjct: 509 LMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAG 568
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ ++LG + ++ + + I+G + + + ++ +G P Y
Sbjct: 569 LLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMESYGTVPIAPVYG 626
Query: 127 TLINGLYRTGHTIVALNLFEEM--------------ASGNGEFGVEGFVDKAKELFLQMK 172
LI+ + G +A+ L +EM AS + V++A L+ +M
Sbjct: 627 MLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMT 686
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
P++ + +I+G W+EA L + +GV
Sbjct: 687 RRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 725
>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Cucumis sativus]
Length = 728
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 191/381 (50%), Gaps = 23/381 (6%)
Query: 38 SLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 97
++F +++ G++PD TY +I +C+ G V + ++ F + T T +I
Sbjct: 230 NVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAF 289
Query: 98 CAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV 157
C +S + A F K+ G PN+ Y+++I+GL + G A L EEM + V
Sbjct: 290 CEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNV 349
Query: 158 ------------EGFVDKAKELFLQM-KDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
+G+ ++A LFL++ + +N P+V TYT++I G+C + A+ L
Sbjct: 350 YTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFE 409
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
M +QG+ PN T+ ++D CK G +A L++LM G PN YN+++DG C G
Sbjct: 410 RMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRG 469
Query: 265 RVNRAKELFVS-----MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
R A +L + +E+ G T Y+ILI+ CK ++ AL +M G +PD
Sbjct: 470 RAEEAFKLLNTGFQNQIEADGVT-----YTILISEQCKRADMNQALVFLNKMFKVGFQPD 524
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
+ +Y TL + ++ + KLFDE+ + G+A TY + I G C+ + AV+ F+
Sbjct: 525 IHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQ 584
Query: 380 TLRILKCELDIRAYNCLIDGL 400
+ C D +Y LI GL
Sbjct: 585 KMSDHGCAPDSISYGALISGL 605
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 171/343 (49%), Gaps = 24/343 (6%)
Query: 40 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
F ++ GL P+L Y+ +I+ CK G V F +L ++++ + PN T TSLI GLC
Sbjct: 302 FHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCK 361
Query: 100 ESRIMEAAALFTKL-RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE 158
+ A LF KL R +PNV TY +I+G + E
Sbjct: 362 KGWTERAFRLFLKLIRSDNYKPNVHTYTAMISG-----------------------YCKE 398
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
+ +A+ LF +MK++ + P+ TYT++I G C A ++++A L+ M ++G PN T+
Sbjct: 399 EKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTY 458
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
N I+D LCK G+ +EA +LL+ Q + + Y L+ C +N+A M
Sbjct: 459 NSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFK 518
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
+G + Y+ LI +C+ ++ + L+ E++ G+ P Y ++ +V
Sbjct: 519 VGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSL 578
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
A K F +M G A D+ +Y I GLCK S + EA +L+ T+
Sbjct: 579 AVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTM 621
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 180/387 (46%), Gaps = 27/387 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +++ + L K L + + G P++YT+ LI+ CK G F +
Sbjct: 312 PNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRL 371
Query: 75 LGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+++RS + PN T+T++I G C E ++ A LF +++ G PN TY TLI+G
Sbjct: 372 FLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHC 431
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ G+ KA EL M +E P+ TY S++ G C
Sbjct: 432 KAGN-----------------------FSKAYELMELMSNEGFFPNTCTYNSIVDGLCKR 468
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
EA LL ++ + VT+ +++ E CK M++A L+ M ++G +P+ +Y
Sbjct: 469 GRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLY 528
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
TL+ FC + +++LF + +G T +Y+ +I GYC+ K++ A+ + +M
Sbjct: 529 TTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSD 588
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
G PD + Y L L + +++ A +L+D M G++ T T CK
Sbjct: 589 HGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFAS 648
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A+ + L L +L IR + LI L
Sbjct: 649 AMVI---LERLNKKLWIRTVHTLIRKL 672
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 126/275 (45%), Gaps = 36/275 (13%)
Query: 160 FVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ---------- 209
V+ A +F +M + PD TY +I G+C + EA + EMM++
Sbjct: 224 LVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLT 283
Query: 210 -------------------------GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
G+ PN++ ++ ++ LCK G + +A LL+ M++
Sbjct: 284 LIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKN 343
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMGCTHTVFSYSILINGYCKNKEIEG 303
G +PN + + +L+ G C G RA LF+ + S V +Y+ +I+GYCK +++
Sbjct: 344 GWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSR 403
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A L+ M +G+ P+ Y TL + +A++L + M +G +T TY + +D
Sbjct: 404 AEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVD 463
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
GLCK EA +L T + E D Y LI
Sbjct: 464 GLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILIS 498
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 134/319 (42%), Gaps = 15/319 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + K + LF+R+ GL P+ TY LI+ CK G S + +
Sbjct: 383 PNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYEL 442
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + F PN T+ S++ GLC R EA L E + TY LI+ +
Sbjct: 443 MELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCK 502
Query: 135 TGHTIVALNLFEEM------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
AL +M + F + + +++LF ++ + P T
Sbjct: 503 RADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKET 562
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YTS+I G+C + A +M D G P+ +++ ++ LCK ++DEA +L D MI
Sbjct: 563 YTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMI 622
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ P TL +C T A V +E + + + LI C K++
Sbjct: 623 DKGLSPCEVTRVTLTYEYCKTEDFASA---MVILERLNKKLWIRTVHTLIRKLCCEKKVA 679
Query: 303 GALSLYGEMLSKGIKPDVV 321
A + ++L K + D V
Sbjct: 680 LAALFFHKLLDKEVNVDRV 698
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 100/204 (49%), Gaps = 1/204 (0%)
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
EA ++++M +QG+ N I+ + ++ A + D M GV P++ Y +
Sbjct: 191 KEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYI 250
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ G+C G V A M G + +++I +C+ + A+ + ++ G+
Sbjct: 251 IVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGL 310
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
P+++ Y+++ L + V++AF+L +EM ++G + +T+ + I GLCK + A
Sbjct: 311 SPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFR 370
Query: 377 LF-RTLRILKCELDIRAYNCLIDG 399
LF + +R + ++ Y +I G
Sbjct: 371 LFLKLIRSDNYKPNVHTYTAMISG 394
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 60/141 (42%)
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
F G++ A ++ + M + G T + +I + + +E A +++ EM ++G+ PD
Sbjct: 184 FAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPD 243
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
Y + V V A + EM G D T I C+ S + AV F
Sbjct: 244 SCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFH 303
Query: 380 TLRILKCELDIRAYNCLIDGL 400
+ + ++ Y+ +I GL
Sbjct: 304 KVTKMGLSPNLINYSSMISGL 324
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 191/393 (48%), Gaps = 12/393 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+ NI+ K +D ++ + +FPD+ T+N+LI+ + G V ++ +
Sbjct: 159 TLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
P VT+ S++KGLC R +A +F + P+V ++N LI G R G
Sbjct: 219 ANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEV 278
Query: 139 IVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
A+ ++EM G F G +D A +MK + PD V YT V
Sbjct: 279 KEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMV 338
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I GFC A +EA + EM+ G P+VVT+N +++ LCK ++ +A +LL+ M + GV
Sbjct: 339 IGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGV 398
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+ + TL+ G+C G A +LF ++ V +Y+ LI+G C+ ++ A
Sbjct: 399 TPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANE 458
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L+ +M ++ I P+ + Y+ L E QVE AF DEM + G + TY + I G C
Sbjct: 459 LWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYC 518
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
++ + + + + +R D+ +N LI G
Sbjct: 519 RSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHG 551
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 187/379 (49%), Gaps = 20/379 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V SFNIL G + + +K + + PD+ +++ LI F + G + H
Sbjct: 260 PDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAY 319
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P+ V +T +I G C + EA + ++ FGC P+V TYNTL+NGL +
Sbjct: 320 LREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCK 379
Query: 135 TGHTIVALNLFEEMASGNGEFGV----------------EGFVDKAKELFLQMKDENINP 178
+ A L EM E GV +G + A +LF + + + P
Sbjct: 380 QHRLLDAEKLLNEME----ERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRP 435
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
DVVTY S+I G C D +A L +M + + PN +T+++++D C+ G++++A L
Sbjct: 436 DVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFL 495
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
D M++ G PN YN+++ G+C +G V + ++ M + +++ LI+GY K
Sbjct: 496 DEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKE 555
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+ + GA +++ M + ++PD V YN + E ++ A ++F M G+ D +TY
Sbjct: 556 ENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTY 615
Query: 359 RTFIDGLCKNSYIVEAVEL 377
+ I+G +A +L
Sbjct: 616 MSLINGHVTAGNSKQAFQL 634
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 188/398 (47%), Gaps = 24/398 (6%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
+ D M N R P + ++N + L K++ +D +F+ ++ + PD+ ++NILI
Sbjct: 213 ALVDSMAN-RGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGG 271
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
FC++G V + TP+ V+F+ LI + A A +++ G P+
Sbjct: 272 FCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPD 331
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
Y +I G R G AL + +EM FG PDVV
Sbjct: 332 GVIYTMVIGGFCRAGSMSEALRVRDEMVG----FGCL-------------------PDVV 368
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY +++ G C + +A+ LL EM ++GV P++ TF ++ C+ G + A +L D +
Sbjct: 369 TYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTL 428
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++ +RP+ YN+L+DG C G + +A EL+ M + +YSILI+ +C+ ++
Sbjct: 429 LRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQV 488
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A EM+ KG P++ YN++ V++ + +M++D V D T+ T
Sbjct: 489 EDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTL 548
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I G K + A +F + D YN +I+G
Sbjct: 549 IHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIING 586
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 174/398 (43%), Gaps = 24/398 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
I +L P+P P F++L +++ F+ L + N L+
Sbjct: 74 IVSSLLASSPTPQPQV-FDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVL 132
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
+ G +L S NA T ++ C A + +++ P+V
Sbjct: 133 SRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDV 192
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
T+N LI+ +R G A+ L + MA + + P +VT
Sbjct: 193 VTHNVLIDARFRAGDVDAAIALVDSMA-----------------------NRGLKPGIVT 229
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y SV++G C +++AK + M V P+V +FN+++ C+ G++ EA + M
Sbjct: 230 YNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQ 289
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
V P+ ++ L+ F G ++ A M+ +G Y+++I G+C+ +
Sbjct: 290 HRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMS 349
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL + EM+ G PDVV YNTL L + H++ A KL +EM+ GV D T+ T I
Sbjct: 350 EALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLI 409
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G C+ A++LF TL + D+ YN LIDG+
Sbjct: 410 HGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGM 447
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 158/352 (44%), Gaps = 47/352 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V SF+ L G ++ D + + + GL PD Y ++I FC+ G +S V
Sbjct: 295 PDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRV 354
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ P+ VT+ +L+ GLC + R+++A L ++ G P++ T+ TLI+G R
Sbjct: 355 RDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCR 414
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMK---------- 172
G+ AL LF+ + V +G + KA EL+ M
Sbjct: 415 QGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHIT 474
Query: 173 ---------------------DENIN----PDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
DE + P++ TY S+I+G+C + + + + L +M
Sbjct: 475 YSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMR 534
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
V P+++TFN ++ K M A + ++M + VRP+A YN +++GF G +
Sbjct: 535 QDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQ 594
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
A +F M G ++Y LING+ + A L+ EM+ +G PD
Sbjct: 595 DAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 108/233 (46%)
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
+E+ + + P + +IR + + EA ++D V N ++
Sbjct: 72 REIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAV 131
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
L + G A L++ NA+ N ++ +C T + A + ME
Sbjct: 132 LSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPD 191
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
V ++++LI+ + +++ A++L M ++G+KP +V YN++ L + + ++A ++F
Sbjct: 192 VVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFR 251
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
M + VA D ++ I G C+ + EAV+ ++ ++ D+ +++CLI
Sbjct: 252 TMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLI 304
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 23/207 (11%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
++ R P +++IL + + + G P++ TYN +I +C+ G
Sbjct: 463 MHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGN 522
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V G L ++ + P+ +TF +LI G E + A +F + P+ TYN
Sbjct: 523 VKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNM 582
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
+ING F +G + A +F M D I PD TY S+I
Sbjct: 583 IING-----------------------FSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLI 619
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPN 214
G A + +A L EM+ +G P+
Sbjct: 620 NGHVTAGNSKQAFQLHDEMIHRGFAPD 646
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 126/460 (27%), Positives = 203/460 (44%), Gaps = 74/460 (16%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FN+L G L + D LF ++ G P+ Y++ IL+ +C+ G S G +
Sbjct: 54 PETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLEL 113
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
LG + R F+PN V + +LI C E + +A L ++R G P+V T+N I+ L
Sbjct: 114 LGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCS 173
Query: 135 TGHTIVALNLFEEMASGN----------------GEFGVEGFVDKAKELFLQMKDENINP 178
+G + A +F +M G F EG +++A+ LF +MK
Sbjct: 174 SGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLM 233
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
+ +Y + G EA+ +L EM+D G++PNV ++N++MD LCKNG + +A L+
Sbjct: 234 NRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLM 293
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL------- 291
LM GV P+ Y TL+ G+C TG+V+ A + M GC+ ++ +IL
Sbjct: 294 RLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKE 353
Query: 292 ----------------------------INGYCKNKEIEGALSLYGEMLSKGIK------ 317
I+G C N +++ A+ + M + G
Sbjct: 354 GRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLG 413
Query: 318 -----------------PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
PD++ Y+T+ L + +V A K F EM + D+ Y
Sbjct: 414 NSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDV 473
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
FI CK I A + + + C ++ YN LI GL
Sbjct: 474 FIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGL 513
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 185/429 (43%), Gaps = 47/429 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +N L K D L + GL PD+ T+N I+ C G+V +
Sbjct: 124 PNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKV----LE 179
Query: 75 LGRILRSCF--------TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
RI R PN +T+ ++ G C E + EA ALF K++V N +YN
Sbjct: 180 ASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYN 239
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDE 174
+ GL R G + A + +EM E V G + A+ L M
Sbjct: 240 IWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSS 299
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
+ PD VTYT+++ G+C+ +EA +L EMM G PN T N+++ L K G++ EA
Sbjct: 300 GVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEA 359
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG-------------- 280
LL M + G + N ++DG C G++++A E+ M + G
Sbjct: 360 EELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGL 419
Query: 281 ---------CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
C + SYS +I+G CK + A + EM+ K ++PD IY+
Sbjct: 420 VDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFC 479
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIR 391
+ ++ AF++ +M++ G TY + I GL + I E L +R D+
Sbjct: 480 KEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVS 539
Query: 392 AYNCLIDGL 400
YN ++ L
Sbjct: 540 IYNNVLSSL 548
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 178/392 (45%), Gaps = 27/392 (6%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
+PP + +N+L K D V L K + ++G+ P+ YT+N+LI C G +
Sbjct: 17 NPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAR 76
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+ ++ PN +F L++G C + L ++R G PN YNTLI+
Sbjct: 77 ELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSF 136
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ G T D A++L +M+ + ++PDVVT+ + I C
Sbjct: 137 CKEGKT-----------------------DDAEKLVDEMRKDGLSPDVVTFNARISALCS 173
Query: 193 ANDWNEAKCLLIEMMDQGV----QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
+ EA + +M V QPN++T+N+++ CK G ++EA L + M
Sbjct: 174 SGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLM 233
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
N YN + G G++ A+ + M MG V+SY+I+++G CKN + A L
Sbjct: 234 NRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLM 293
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
M S G+ PD V Y TL +V A + EM RDG + + +T + L K
Sbjct: 294 RLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKE 353
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I EA EL + + +D N +IDGL
Sbjct: 354 GRISEAEELLQKMNEKGYVIDTVTCNIVIDGL 385
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 178/385 (46%), Gaps = 48/385 (12%)
Query: 19 SFNI-LFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGR 77
S+NI L G + K + L L K + G+ P++Y+YNI+++ CK G + +++
Sbjct: 237 SYNIWLLGLVRIGKLLEAQLVL-KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRL 295
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
+ S P+ VT+T+L+ G C ++ EA + ++ GC PN +T N L+ L++
Sbjct: 296 MTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWK--- 352
Query: 138 TIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
EG + +A+EL +M ++ D VT VI G C +
Sbjct: 353 --------------------EGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLD 392
Query: 198 EAKCLLIEMMDQGVQ-----------------------PNVVTFNVIMDELCKNGKMDEA 234
+A ++ M G P++++++ I+ LCK G++ EA
Sbjct: 393 KAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEA 452
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+ M+ ++P++ +Y+ + FC G+++ A + ME GC T+ +Y+ LI G
Sbjct: 453 KKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMG 512
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
+I L EM +G+ PDV IYN + L E +V+ A + DEM + G++ +
Sbjct: 513 LGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPN 572
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFR 379
++ I CK E+F
Sbjct: 573 ISSFSILIKAFCKACDFSAVDEIFE 597
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 178/452 (39%), Gaps = 81/452 (17%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+NI+ L KN L + + S+G+ PD TY L++ +C G+VS V
Sbjct: 268 PNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNV 327
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++R +PN T L+ L E RI EA L K+ G + T N +I+GL
Sbjct: 328 LREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCN 387
Query: 135 TGHTIVALNLFEEM------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
G A+ + M A GN G VD + M PD+++Y+++I
Sbjct: 388 NGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCM------PDLISYSTIIS 441
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR------------ 236
G C A EAK IEMM + +QP+ ++V + CK GK+ A R
Sbjct: 442 GLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNK 501
Query: 237 -----------------------LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
L+D M + GV P+ +YN ++ C GRV A +
Sbjct: 502 TLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVL 561
Query: 274 VSMESMGCTHTVFSYSILINGYCK----------------------------------NK 299
M G + + S+SILI +CK
Sbjct: 562 DEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELLVGG 621
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
E+ A L+ L + +Y L L + +++ A + ++ G D ++
Sbjct: 622 EVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFM 681
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIR 391
IDGL K EA EL + + E ++
Sbjct: 682 PVIDGLGKRGNKHEADELAEKMMEMASEGKVK 713
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 178/350 (50%), Gaps = 23/350 (6%)
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 110
+++TYN L++ CK G++S + ++L P V++ S+I G C + + AA++F
Sbjct: 452 NIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVF 511
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQ 170
+ + G +PNV TY+ L++G ++ G T A +F+ M
Sbjct: 512 SDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMV--------------------- 550
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
DENI P TY I G C +EA+ +L + +++G P +T+N IMD K G
Sbjct: 551 --DENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGS 608
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ A M + GV PN Y TL++GFC + A ++ M + G + +Y
Sbjct: 609 VSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGA 668
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI+G+CK ++IE A L+ E+L G+ P+ VIYN+L ++ +E A L M +G
Sbjct: 669 LIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEG 728
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++ D TY T IDGL K +V A++L+ + DI Y LI+GL
Sbjct: 729 ISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGL 778
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 166/353 (47%), Gaps = 23/353 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++IL KN + +F R+ + P +TYNI IN CK+GR S +
Sbjct: 521 PNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDM 580
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + F P +T+ S++ G E + A + ++ G PNV TY TLING +
Sbjct: 581 LKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCK 640
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+T +AL + EM +++ + D+ Y ++I GFC
Sbjct: 641 NNNTDLALKMRNEM-----------------------RNKGLELDIAAYGALIDGFCKKQ 677
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
D A L E++D G+ PN V +N ++ M+ A L M+ G+ + Y
Sbjct: 678 DIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYT 737
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+DG GR+ A +L+ M + G + Y++LING C ++E A + EM
Sbjct: 738 TLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERD 797
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
I P+V IYN L F+ ++ AF+L +EM G+ + TY I+G K
Sbjct: 798 SITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIK 850
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 185/396 (46%), Gaps = 11/396 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F + G K + L L + S G+ ++ L+ +CK ++
Sbjct: 312 PSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEF 371
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ + +PN VT+ LI+ C + +A L+T+++ P VF N+LI G +
Sbjct: 372 FDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLK 431
Query: 135 TGHTIVALNLFEEMASGN-----------GEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
A LF+E + + EG + +A L+ +M D+ + P V+Y
Sbjct: 432 VESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSY 491
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
S+I G C + + A + +M+D G++PNV+T++++MD KNG + A + D M+
Sbjct: 492 NSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVD 551
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
+ P+ F YN ++G C GR + A+++ G +Y+ +++G+ K +
Sbjct: 552 ENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSS 611
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
AL+ Y EM G+ P+V+ Y TL + + + A K+ +EM+ G+ D Y ID
Sbjct: 612 ALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALID 671
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G CK I A LF L + YN LI G
Sbjct: 672 GFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISG 707
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 189/397 (47%), Gaps = 24/397 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
++ ML+ +P V S+N + + + D S+F + GL P++ TY+IL++ +
Sbjct: 475 LWQKMLDKGLAPTKV-SYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGY 533
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K G + F V R++ P+ T+ I GLC R EA + K G P
Sbjct: 534 FKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVC 593
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TYN++++G + G AL + EM + ++P+V+T
Sbjct: 594 LTYNSIMDGFIKEGSVSSALTAYREMC-----------------------ESGVSPNVIT 630
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT++I GFC N+ + A + EM ++G++ ++ + ++D CK ++ AS L ++
Sbjct: 631 YTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELL 690
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ PN+ +YN+L+ G+ + A L M G + + +Y+ LI+G K +
Sbjct: 691 DGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLV 750
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL LY EM +KGI PD++IY L L Q+E A K+ EM+RD + + Y I
Sbjct: 751 LALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALI 810
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G K + EA L + + Y+ LI+G
Sbjct: 811 AGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILING 847
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 183/394 (46%), Gaps = 11/394 (2%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+++I+ KN + L K + G P T+ +I K G + +
Sbjct: 279 AAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKD 338
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ N V T+L+KG C + +++ A F K+ G PN TY LI + G
Sbjct: 339 EMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNG 398
Query: 137 HTIVALNLFEEMASGN-------GEFGVEGFVD-KAKELFLQMKDENINPDVV---TYTS 185
+ A +L+ +M + N + GF+ +++E ++ DE + D+ TY S
Sbjct: 399 NMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNS 458
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
++ C +EA L +M+D+G+ P V++N ++ C+ G +D A+ + M+ G
Sbjct: 459 LLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCG 518
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
++PN Y+ LMDG+ G A +F M + F+Y+I ING CK A
Sbjct: 519 LKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQ 578
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
+ + + KG P + YN++ + V A + EM GV+ + TY T I+G
Sbjct: 579 DMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGF 638
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
CKN+ A+++ +R ELDI AY LIDG
Sbjct: 639 CKNNNTDLALKMRNEMRNKGLELDIAAYGALIDG 672
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 160/352 (45%), Gaps = 30/352 (8%)
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 110
D+ YN L+N + K +++ R++ S P L+ L I EA ++
Sbjct: 173 DIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVY 232
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQ 170
K+ + G + FT H ++ NL + N E ++AK+ FL+
Sbjct: 233 EKMVLKGVHGDCFTV-----------HIMMRANLKD-----NNE-------EEAKKFFLE 269
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
K + D Y+ VI+ FC D A LL +M D+G P+ TF ++ K G
Sbjct: 270 AKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGN 329
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
M EA RL D M+ GV+ N V TL+ G+C ++ A E F M G + +Y++
Sbjct: 330 MVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAV 389
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI CKN + A LY +M +K I P V I N+L ++ E A KLFDE
Sbjct: 390 LIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDE----A 445
Query: 351 VA---ADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
VA A+ +TY + + LCK + EA L++ + +YN +I G
Sbjct: 446 VACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILG 497
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 116/228 (50%), Gaps = 14/228 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L KN + D L + + + GL D+ Y LI+ FCK + +
Sbjct: 626 PNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWL 685
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+L +PN+V + SLI G + + A L ++ G ++ TY TLI+GL +
Sbjct: 686 FSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLK 745
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G ++AL+L+ EM++ NG G +G ++ A+++ +M+ ++I P+V
Sbjct: 746 EGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCG-KGQLENAQKILAEMERDSITPNVP 804
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
Y ++I G A + EA L EM+D+G+ PN T++++++ K G
Sbjct: 805 IYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGG 852
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 12/259 (4%)
Query: 128 LINGLYRTGHTI-VALNLFEEMASGNG----EFGVEGFVDKAKELFLQMKDENINPDVVT 182
L++ L R+ T+ A NL SG+ V+ F+ K + + D+
Sbjct: 124 LLHILTRSSETLKQAQNLLNRFISGDSGPMPNILVDHFIGSTKRF-------DFDSDIRI 176
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++ + AN N+A +++ + P + N ++ L KN + EA + + M+
Sbjct: 177 YNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMV 236
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
GV + F + +M AK+ F+ +S G +YSI+I +CKN ++E
Sbjct: 237 LKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVE 296
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L +M KG P + ++ + + A +L DEM GV + T +
Sbjct: 297 LACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLV 356
Query: 363 DGLCKNSYIVEAVELFRTL 381
G CK +V A+E F +
Sbjct: 357 KGYCKQDKLVSALEFFDKM 375
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ L L K L L+ +++ G+ PD+ Y +LIN C G++ + +L +
Sbjct: 735 TYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEM 794
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
R TPN + +LI G + EA L ++ G PN TY+ LING + G++
Sbjct: 795 ERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGNS 854
Query: 139 IVALNLFEEMASGNG------EFGVEGFVDKAKELFLQ 170
+ L + G G + ++ ++KA +L+
Sbjct: 855 ALKSLLSLKFKDGKGMKRINEQDSIKKVIEKAVNKYLR 892
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 189/387 (48%), Gaps = 11/387 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ + L + LF+ + G+ PD+YTY ILI+ FCK G + +
Sbjct: 286 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 345
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ +P VT+T+LI ++ +A +F ++ GC PN TY L++GL +
Sbjct: 346 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 405
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKA-KELFLQMKDEN-INPDVVTYTSVIRGFCY 192
G+ A ++ ++ G D A + + +D + + P+VVTY +++ G C
Sbjct: 406 AGNISKAFEVYAKLI---------GTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCK 456
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
A+ + A LL M+ G +PN + ++ ++D CK GK+D A + M + G P+
Sbjct: 457 AHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHT 516
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
Y +L+D GR++ A ++ M CT V +Y+ +I+G C+ E E AL L M
Sbjct: 517 YTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLME 576
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
KG P+VV Y L L + +++ + LF +M R G + + TYR I+ LC +
Sbjct: 577 EKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLD 636
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDG 399
+A L ++ ++ Y C I G
Sbjct: 637 KARLLLGEMKQTYWPKYLQGYRCAIQG 663
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 180/391 (46%), Gaps = 39/391 (9%)
Query: 26 CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTP 85
CL +D L K + G PD TY+ +I C +V F++ + TP
Sbjct: 262 CLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTP 321
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
+ T+T LI C I +A LF ++R GC P V TY LI+ +
Sbjct: 322 DVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ-------- 373
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA---KCL 202
V +A ++F +M D P+ VTY +++ G C A + ++A
Sbjct: 374 ---------------VPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK 418
Query: 203 LIEMMDQG-------------VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
LI D + PNVVT+ ++D LCK K+D A LLD M+ G PN
Sbjct: 419 LIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPN 478
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
VY+ L+DGFC G+++ A+E+F+ M G +V +Y+ LI+ K+ ++ A+ +
Sbjct: 479 HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 538
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
+ML P+VV Y + L I + E+A KL M+ G + + TY IDGL K
Sbjct: 539 QMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAG 598
Query: 370 YIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I +++LF + C + Y LI+ L
Sbjct: 599 KIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 629
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 182/416 (43%), Gaps = 32/416 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L K K +F R+ G P+ TY L++ CK G +S F V
Sbjct: 356 PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 415
Query: 75 LGRIL----------------RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC 118
+++ R PN VT+ +L+ GLC ++ A L + GC
Sbjct: 416 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 475
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKE 166
EPN Y+ LI+G + G A +F +M V +G +D A +
Sbjct: 476 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 535
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
+ QM ++ P+VVTYT++I G C + +A LL M ++G PNVVT+ ++D L
Sbjct: 536 VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 595
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
K GK+D + L M + G PN Y L++ C G +++A+ L M+ +
Sbjct: 596 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 655
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
Y I G+ +K +L + EM S G P +Y L + ++E A +L EM
Sbjct: 656 GYRCAIQGF--SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEM 713
Query: 347 QR--DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
V D Y + I LC S + EA L+ + ++ + CLI GL
Sbjct: 714 MEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGL 769
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 175/389 (44%), Gaps = 33/389 (8%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
L + ++D +S R+ P++ TY L++ F K ++ ++ ++ PN
Sbjct: 117 LMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPN 176
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
F SL+ C E A L ++ GC P YN I +
Sbjct: 177 PSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSI-------------- 222
Query: 147 EMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
G + +D A++++ +M N + V + R C +++A L+ EM
Sbjct: 223 ---CGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEM 279
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
M +G P+ T++ ++ LC K+++A L M +GV P+ + Y L+D FC G +
Sbjct: 280 MRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLI 339
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+A+ LF M S+GC+ TV +Y+ LI+ Y K K++ A ++ M+ G +P+ V Y L
Sbjct: 340 EQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGAL 399
Query: 327 FVVLFEIHQVERAFKLFDEM----------------QRDGVAADTWTYRTFIDGLCKNSY 370
L + + +AF+++ ++ R +A + TY +DGLCK
Sbjct: 400 VDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHK 459
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ A EL + CE + Y+ LIDG
Sbjct: 460 VDHAHELLDAMLSSGCEPNHIVYDALIDG 488
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 163/408 (39%), Gaps = 67/408 (16%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L L+ D + K ++ +G D +T + CK GR +
Sbjct: 38 PSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA--- 94
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L I R F + V T +I GL S EA + ++R C PNV TY TL++G +
Sbjct: 95 LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 154
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ K + M E NP+ + S++ +C
Sbjct: 155 KKQ-----------------------LGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEK 191
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN-------------------------- 228
D+ A LL M G P V +N+ + +C
Sbjct: 192 DYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVL 251
Query: 229 ---------------GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
GK D+A +L+ M++ G P+ Y+ ++ C +V +A LF
Sbjct: 252 NKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLF 311
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
M+ +G T V++Y+ILI+ +CK IE A L+ EM S G P VV Y L +
Sbjct: 312 QEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKA 371
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
QV +A +F M G + TY +DGLCK I +A E++ L
Sbjct: 372 KQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 419
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 136/335 (40%), Gaps = 50/335 (14%)
Query: 113 LRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN---GEFGVEGFVD------K 163
L+ FG P+ TYN L+ L G + + +EM+ F V F +
Sbjct: 31 LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
+ ++ E+ D V T +I G A+ ++EA L M PNVVT+ ++
Sbjct: 91 WADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLS 150
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
K ++ R++++M+ G PN ++N+L+ +C A +L M + GC
Sbjct: 151 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210
Query: 284 TVFSYSILINGYCKNKEIEG------ALSLYGEMLS------------------------ 313
Y+I I C +++ A +YGEML+
Sbjct: 211 GYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFD 270
Query: 314 -----------KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
KG PD Y+ + L +VE+AF LF EM+ GV D +TY I
Sbjct: 271 KAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILI 330
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
D CK I +A LF +R + C + Y LI
Sbjct: 331 DSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALI 365
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 77/199 (38%), Gaps = 11/199 (5%)
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
+ D G +P+ VT+N ++ L G++D R+ M + G + F C GR
Sbjct: 31 LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90
Query: 266 VNRAKELF----VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
A ++ ++++ CTH +I+G + + A+S M P+VV
Sbjct: 91 WADALDMIEREDFKLDTVLCTH-------MISGLMEASYFDEAMSFLHRMRCNSCIPNVV 143
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
Y TL + Q+ ++ + M +G + + + + C A +L +
Sbjct: 144 TYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRM 203
Query: 382 RILKCELDIRAYNCLIDGL 400
C YN I +
Sbjct: 204 TTCGCPPGYVVYNIFIGSI 222
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 62/183 (33%), Gaps = 7/183 (3%)
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
V T + C + D L D G RP+ YN L+ G+V+ +
Sbjct: 9 VATLRASLRRTCSHAAGDSEDPLKDF----GYRPSKVTYNALVQVLSSAGQVDLGFRVQK 64
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
M G F+ + CK AL + + + K D V+ + L E
Sbjct: 65 EMSESGFCMDRFTVGCFAHALCKEGRWADALDM---IEREDFKLDTVLCTHMISGLMEAS 121
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
+ A M+ + + TYRT + G K + + + C + +N
Sbjct: 122 YFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFN 181
Query: 395 CLI 397
L+
Sbjct: 182 SLV 184
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 207/419 (49%), Gaps = 58/419 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +++ L L K + + V+ L K + GL P++YT+ I I + G++ + +
Sbjct: 225 PSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEI 284
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R+ P+ VT+T LI LC ++ A LF K++ G +P+ Y TL++
Sbjct: 285 FRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLD---- 340
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+F G +D KE + QM+ + PDVVT+T ++ C A
Sbjct: 341 -------------------KFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKAR 381
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
D++EA M QG+ PN+ T+N ++ L + G++++A +LL M +GV+P A+ YN
Sbjct: 382 DFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYN 441
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMG-------CTHTVFS-------------------- 287
+D F +G +A E F M++ G C +++S
Sbjct: 442 IFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLREN 501
Query: 288 --------YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
Y++++ Y K +++ A++L EM+ G +PDV++ N+L L++ +V+ A
Sbjct: 502 GLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEA 561
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
+++FD M+ ++ TY T + GL K + +A+ELF ++ KC + ++N L+D
Sbjct: 562 WQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLD 620
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 181/358 (50%), Gaps = 13/358 (3%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
DT + ++ + G PD+ T+ IL++ CK F + + PN T+ +L
Sbjct: 349 DTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTL 408
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN- 152
I GL RI +A L + G +P +TYN I+ ++G T A+ FE+M +
Sbjct: 409 ICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGI 468
Query: 153 -----------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
G + +AK +F +++ + PD VTY +++ + +EA
Sbjct: 469 VPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVN 528
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
LL EM+ G +P+V+ N ++D L K G++DEA ++ D M + + P YNTL+ G
Sbjct: 529 LLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLG 588
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
GRV +A ELF SM C+ S++ L++ +CKN E+E AL ++ +M KPDV+
Sbjct: 589 KEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVL 648
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
YNT+ L + ++V AF F ++++ + D T T + GL K I +A+ + R
Sbjct: 649 TYNTVIYGLIKENKVNHAFWFFHQLKK-SMHPDHVTICTLLPGLVKCGQIGDAISIAR 705
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 189/415 (45%), Gaps = 47/415 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG--- 71
P V +F I L + D +F+R++ G PDL TY +LI+ C G++ +
Sbjct: 260 PNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKEL 319
Query: 72 FVVL--------------------------------GRILRSCFTPNAVTFTSLIKGLCA 99
FV + ++ + P+ VTFT L+ LC
Sbjct: 320 FVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCK 379
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE----- 154
EA A F +R G PN+ TYNTLI GL R G AL L M S +
Sbjct: 380 ARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYT 439
Query: 155 -------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
FG G KA E F +MK + I P++V + + EAK + +
Sbjct: 440 YNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLR 499
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+ G+ P+ VT+N++M K G++DEA LL MI+ G P+ V N+L+D GRV+
Sbjct: 500 ENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVD 559
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A ++F M+ M + TV +Y+ L++G K ++ A+ L+ M+ K P+ + +NTL
Sbjct: 560 EAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLL 619
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
+ +VE A K+F +M D TY T I GL K + + A F L+
Sbjct: 620 DCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK 674
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 185/390 (47%), Gaps = 12/390 (3%)
Query: 23 LFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSC 82
+F L+ + ++ ++ G + Y+YN LI+ + G V R++
Sbjct: 163 IFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEG 222
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
P+ T+++L+ L + L ++ G PNV+T+ I L R G A
Sbjct: 223 LKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAY 282
Query: 143 NLFEEM-ASGNGEFGV-----------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
+F M G G V G ++ AKELF++MK PD V Y +++ F
Sbjct: 283 EIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKF 342
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
D + K +M G P+VVTF +++D LCK DEA D+M + G+ PN
Sbjct: 343 NDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNL 402
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
YNTL+ G GR+ A +L +MES+G T ++Y+I I+ + K+ E A+ + +
Sbjct: 403 HTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEK 462
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M +KGI P++V N L E+ ++ A +F+ ++ +G+A D+ TY + K
Sbjct: 463 MKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQ 522
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ EAV L + CE D+ N LID L
Sbjct: 523 VDEAVNLLSEMIRNGCEPDVIVVNSLIDSL 552
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 168/339 (49%), Gaps = 14/339 (4%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ IFD P + S+N L G L + + + LFK + + G PD +T+N+L+
Sbjct: 772 YQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLA 831
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
K G+++ F + ++ P+A+T+ +I L + + +A F L P
Sbjct: 832 VHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRP 891
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKEL 167
TY LI+GL + G A+ LFEEM+ NG +G G + A +L
Sbjct: 892 TPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILING-YGKIGDTETACQL 950
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
F +M +E I PD+ +YT ++ C A +EA E+ G+ P+ + +N I++ L K
Sbjct: 951 FKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGK 1010
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
+ +M+EA L + M G+ P+ + YN+LM L G V +AK ++ ++ G VF+
Sbjct: 1011 SQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFT 1070
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
Y+ LI GY ++ E A ++Y M+ G P++ Y L
Sbjct: 1071 YNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 164/352 (46%), Gaps = 13/352 (3%)
Query: 58 LINCFCKMGRVSHGFVVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF 116
L+ CK R + + + + + +P ++ LI L +A LF ++
Sbjct: 758 LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817
Query: 117 GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKA 164
GC P+ FT+N L+ ++G L++EM S +DKA
Sbjct: 818 GCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKA 877
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
+ F + + P TY +I G EA L EM D G +PN FN++++
Sbjct: 878 LDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILING 937
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
K G + A +L M+ G+RP+ Y L+D CL GRV+ A F ++S G
Sbjct: 938 YGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPD 997
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
+Y+ +ING K++ +E AL+LY EM ++GI PD+ YN+L + L VE+A ++++
Sbjct: 998 FIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYE 1057
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
E+Q G+ D +TY I G + A +++ + + C +I Y L
Sbjct: 1058 ELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 157/320 (49%), Gaps = 13/320 (4%)
Query: 93 LIKGLCAESRIMEAAALFTKL-RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG 151
L++ LC R + A +F K + G P + +YN LI L +T A +LF++M +
Sbjct: 758 LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817
Query: 152 N------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
G G + + EL+ +M PD +TY VI +N+ ++A
Sbjct: 818 GCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKA 877
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
+++ +P T+ ++D L K G+++EA RL + M G +PN ++N L++G
Sbjct: 878 LDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILING 937
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
+ G A +LF M + G + SY+IL++ C ++ AL + E+ S G+ PD
Sbjct: 938 YGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPD 997
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
+ YN + L + ++E A L++EM+ G+ D +TY + + L + +A ++
Sbjct: 998 FIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYE 1057
Query: 380 TLRILKCELDIRAYNCLIDG 399
L++ E D+ YN LI G
Sbjct: 1058 ELQLAGLEPDVFTYNALIRG 1077
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 139/291 (47%), Gaps = 12/291 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FN+L K+ + L+K + S PD TYNI+I+ K +
Sbjct: 821 PDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDF 880
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ S F P T+ LI GL R+ EA LF ++ +GC+PN +N LING +
Sbjct: 881 FYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGK 940
Query: 135 TGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKDENINPDVVT 182
G T A LF+ M + ++ G VD+A F ++K ++PD +
Sbjct: 941 IGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIA 1000
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I G + EA L EM ++G+ P++ T+N +M L G +++A R+ + +
Sbjct: 1001 YNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQ 1060
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
G+ P+ F YN L+ G+ L+ A ++ +M GC + +Y+ L N
Sbjct: 1061 LAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPN 1111
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 195/450 (43%), Gaps = 57/450 (12%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M +M+ SP V ++N L L K + LF+ + P+ ++N L++CF
Sbjct: 564 MFDRMKDMKLSPT-VVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCF 622
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK V + ++ P+ +T+ ++I GL E+++ A F +L+ P+
Sbjct: 623 CKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKK-SMHPDH 681
Query: 123 FTYNTLINGLYRTGHTIVALNL----------------FEEMASGNGEFGVEGFVDKA-- 164
T TL+ GL + G A+++ +E++ G VE +DKA
Sbjct: 682 VTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTL---VEAEMDKAII 738
Query: 165 --KELFLQ--------------------------------MKDENINPDVVTYTSVIRGF 190
+EL L K I+P + +Y +I
Sbjct: 739 FAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGEL 798
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
+ +A L +M + G P+ TFN+++ K+GK+ E L MI +P+A
Sbjct: 799 LEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDA 858
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
YN ++ + +++A + F + S T +Y LI+G K +E A+ L+ E
Sbjct: 859 ITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEE 918
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M G KP+ I+N L +I E A +LF M +G+ D +Y +D LC
Sbjct: 919 MSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGR 978
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ EA+ F L+ + D AYN +I+GL
Sbjct: 979 VDEALYYFNELKSTGLDPDFIAYNRIINGL 1008
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 1/210 (0%)
Query: 190 FCYANDWNEAKCLLIEMMDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
F +D E + E M + + + ++ T+ I L G + + + +L+ M + G
Sbjct: 131 FLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVL 190
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
NA+ YN L+ +G A E++ M S G ++ +YS L+ K ++ E + L
Sbjct: 191 NAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLL 250
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
EM G++P+V + VL +++ A+++F M +G D TY ID LC
Sbjct: 251 KEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNA 310
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLID 398
+ A ELF ++ + D Y L+D
Sbjct: 311 GQLENAKELFVKMKANGHKPDQVIYITLLD 340
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%)
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
T N +++ L + K+++ + + + M + +R + Y T+ + G + + + M
Sbjct: 124 TCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKM 183
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
G +SY+ LI+ ++ AL +Y M+S+G+KP + Y+ L V L +
Sbjct: 184 RKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDS 243
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
E L EM+ G+ + +T+ I L + I EA E+FR + C D+ Y L
Sbjct: 244 EMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVL 303
Query: 397 IDGL 400
ID L
Sbjct: 304 IDAL 307
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 195/398 (48%), Gaps = 13/398 (3%)
Query: 13 SPPPVC-SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
+PPP S+N++ + + + +F + + P+ TYN +I+ K G + G
Sbjct: 191 APPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAG 250
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
F + +++ PNA+T+ L+ GLC R+ E +AL ++ P+ FTY+ L +G
Sbjct: 251 FSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDG 310
Query: 132 LYRTGHTIVALNLFEEMASGNGEFG------------VEGFVDKAKELFLQMKDENINPD 179
L R G + L+LF + G +G V A+E+ + + + P
Sbjct: 311 LSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPT 370
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
V Y ++I G+C + A +M + ++P+ +T+N +++ LCK ++ A LL
Sbjct: 371 RVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLM 430
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M GV P +NTL+D + TG++ + + M+ G V SY ++N +CKN
Sbjct: 431 EMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNG 490
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
+I A+++ +M K + P+ +YN + E ++AF L ++M+ +G++ TY
Sbjct: 491 KIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYN 550
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
I GLC S I EA E+ +L + D +YN LI
Sbjct: 551 LLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLI 588
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 181/367 (49%), Gaps = 23/367 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ILF L++N +LSLF + G+ YT +IL+N CK G+VS V
Sbjct: 299 PDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV 358
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ + P V + +LI G C + A + F +++ +P+ TYN LINGL +
Sbjct: 359 LQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCK 418
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ A++L ++M+D +NP V T+ ++I +
Sbjct: 419 AER-----------------------ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG 455
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ +L EM + G++PNVV++ I++ CKNGK+ EA +LD M V PNA VYN
Sbjct: 456 QLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYN 515
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
++D + G ++A L M+S G + ++ +Y++LI G C +I A + + +
Sbjct: 516 AIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNH 575
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
+ PD V YNTL +++A L M + G+ + TY I GL ++E
Sbjct: 576 RLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEM 635
Query: 375 VELFRTL 381
L++ +
Sbjct: 636 EYLYQKM 642
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 172/381 (45%), Gaps = 14/381 (3%)
Query: 31 KHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR-SCFTPNAVT 89
+H D V F L S G PD + +N + G + +L R+ R PNA +
Sbjct: 140 RHAD-VRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 198
Query: 90 FTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
+ +I G+ R +A +F ++ PN TYNT+I+G + G +L ++M
Sbjct: 199 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMV 258
Query: 150 SGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
+ G + + L +M + + PD TY+ + G D
Sbjct: 259 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 318
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
L + + GV T +++++ LCK+GK+ A +L ++ G+ P +YNTL+
Sbjct: 319 AMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 378
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
+G+C TG + A F M+S +Y+ LING CK + I A L EM G+
Sbjct: 379 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 438
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
P V +NTL Q+E+ F + EMQ +G+ + +Y + ++ CKN I EAV +
Sbjct: 439 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAI 498
Query: 378 FRTLRILKCELDIRAYNCLID 398
+ + + YN +ID
Sbjct: 499 LDDMFHKDVLPNAQVYNAIID 519
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 165/368 (44%), Gaps = 26/368 (7%)
Query: 34 DTVLSLFKRL--NSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 91
D L L L + P L + N+L+ +GR + G + + P+ +
Sbjct: 105 DGALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWN 164
Query: 92 SLIKGLCAESRIMEAAALFTKLRVFGCEP-NVFTYNTLINGLYRTGHTIVALNLFEEMAS 150
++ A + EA + ++ G P N F+YN +I G++R G A+ +F+EM
Sbjct: 165 KAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMT- 223
Query: 151 GNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG 210
+ + P+ +TY ++I G D L +M+ G
Sbjct: 224 ----------------------ERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHG 261
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
++PN +T+NV++ LC+ G+M E S LLD M + P+ F Y+ L DG G
Sbjct: 262 LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAML 321
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
LF G T ++ SIL+NG CK+ ++ A + +++ G+ P VIYNTL
Sbjct: 322 SLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGY 381
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
+ ++E AF F +M+ + D TY I+GLCK I A +L ++ +
Sbjct: 382 CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTV 441
Query: 391 RAYNCLID 398
+N LID
Sbjct: 442 ETFNTLID 449
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 135/314 (42%), Gaps = 24/314 (7%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F F M + R P ++N L L K + L + G+ P + T+N LI+
Sbjct: 391 FSTFGQMKS-RHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLID 449
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+ + G++ F+VL + + PN V++ S++ C +I EA A+ + P
Sbjct: 450 AYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLP 509
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
N YN +I+ G D+A L +MK I+P +
Sbjct: 510 NAQVYNAIIDAYVEHGPN-----------------------DQAFILVEKMKSNGISPSI 546
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY +I+G C + +EA+ ++ + + + P+ V++N ++ C G +D+A L
Sbjct: 547 VTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQR 606
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M + G++ Y+ L+ G GR+ + L+ M + ++I++ Y K
Sbjct: 607 MHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGN 666
Query: 301 IEGALSLYGEMLSK 314
A L EML K
Sbjct: 667 EIKAEDLRKEMLQK 680
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 197/400 (49%), Gaps = 24/400 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ +F+ ML+ + PV +++ + D +FK +N G PDL N ++
Sbjct: 481 YRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDG-HKIFKEMNRRGCQPDLTLLNTYMD 539
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C K G V G + I F P+ +++ LI GL + E +++F ++ G
Sbjct: 540 CVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFAL 599
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
+ YN +++G ++G +DKA E+ +MK + + P V
Sbjct: 600 DARAYNAVVDGFCKSGK-----------------------LDKAYEVLEEMKVKRVPPTV 636
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
TY S+I G + +EA L E +G++ NV+ ++ ++D K G++DEA +L+
Sbjct: 637 ATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEE 696
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M++ G+ PN + +N+LMD +N A F SM+ M C+ ++YSILING C+ ++
Sbjct: 697 MMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQK 756
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
A + EM +G+ P+VV Y T+ L ++ + A LF+ + +G D ++
Sbjct: 757 YNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNA 816
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I+G+ + +EA +F R+ C ++++A L+D L
Sbjct: 817 LIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDAL 856
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 180/392 (45%), Gaps = 13/392 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F L LA+ + L+L + + L PD+ YN+ I+CF K G V + +
Sbjct: 220 FTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELK 279
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
P+ V++TS+I LC R+ EA LF ++ P + YNT+I G G
Sbjct: 280 SQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFE 339
Query: 140 VALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSVI 187
A L +++ V F VD+A LF MK ++ P+ TY +I
Sbjct: 340 NAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMK-KDAEPNSSTYNIII 398
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
C A EA + EM G+ PN++T N+++D LCK K + A + + Q G
Sbjct: 399 DMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCN 458
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
PN+ Y +L+DG G V+ A LF +M G Y+ LI + + E +
Sbjct: 459 PNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKI 518
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
+ EM +G +PD+ + NT +F+ VE+ +F++++ G D +Y I GL K
Sbjct: 519 FKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTK 578
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
E +F ++ LD RAYN ++DG
Sbjct: 579 AGQARETSSIFHAMKQQGFALDARAYNAVVDG 610
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 186/431 (43%), Gaps = 46/431 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +N+ C K + D F L S GL PD +Y +I CK GR+S +
Sbjct: 250 PDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEEL 309
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
G++ P A + ++I G + + A L +L+ GC P+V ++N+++ L +
Sbjct: 310 FGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGK 369
Query: 135 TGHTIVALNLFEEM---ASGNGE--------FGVEGFVDKAKELFLQMKDENINPDVVTY 183
AL LFE M A N + G V++A + +M+ + P+++T
Sbjct: 370 KRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTV 429
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
++ C A + A + +G PN VT+ ++D L K G +D+A RL + M+
Sbjct: 430 NIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLD 489
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT------------------- 284
G N VY +L+ F + GR ++F M GC
Sbjct: 490 TGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEK 549
Query: 285 ----------------VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
V SYSILI+G K + S++ M +G D YN +
Sbjct: 550 GRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVD 609
Query: 329 VLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
+ ++++A+++ +EM+ V TY + IDGL K + EA LF + EL
Sbjct: 610 GFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIEL 669
Query: 389 DIRAYNCLIDG 399
++ Y+ LIDG
Sbjct: 670 NVIVYSSLIDG 680
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 177/433 (40%), Gaps = 48/433 (11%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P P C+ L L + + D + + P Y +LI + +
Sbjct: 146 PNPACA--DLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALE 203
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L ++ + FT+L++ L E R+ A AL +++ EP++ YN I+
Sbjct: 204 LLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFG 263
Query: 134 RTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVV 181
+ G+ +A F E+ S + G + +A+ELF QM+ E P
Sbjct: 264 KAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAY 323
Query: 182 TYTSVIRGFCYANDWNEA-----------------------KCL-----------LIEMM 207
Y ++I G+ A + A CL L E M
Sbjct: 324 AYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAM 383
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+ +PN T+N+I+D LC GK++EA + D M G+ PN N ++D C +
Sbjct: 384 KKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFE 443
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A E+F + GC +Y LI+G K ++ A L+ ML G + V+Y +L
Sbjct: 444 PAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLI 503
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
F + E K+F EM R G D T++D + K + + +F ++
Sbjct: 504 RNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFL 563
Query: 388 LDIRAYNCLIDGL 400
D+R+Y+ LI GL
Sbjct: 564 PDVRSYSILIHGL 576
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 12/240 (5%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ ++ PP V ++ + LAK D LF+ S G+ ++ Y+ LI+ F K+GR
Sbjct: 627 MKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGR 686
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ +++L +++ TPN T+ SL+ L I EA F ++ C PN +TY+
Sbjct: 687 IDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSI 746
Query: 128 LINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDEN 175
LINGL R A ++EM G + A LF + K
Sbjct: 747 LINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANG 806
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
PD ++ ++I G +AN EA + E +G + NV ++D L K +++A+
Sbjct: 807 GTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQAA 866
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 124/407 (30%), Positives = 191/407 (46%), Gaps = 24/407 (5%)
Query: 13 SPPPVCS-----FNILFGCLAKNKHYDTVLSLFKRLNSTGL-FPDLYTYNILINCFCKMG 66
SPPP+ F L L++ L LF ++ P TYN +I C+
Sbjct: 108 SPPPLRPLFDRPFASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRA 167
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
++ L ++RS + P+A TF SLI G C +++ A LF K+ + G +V +Y
Sbjct: 168 DLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYA 227
Query: 127 TLINGLYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKD 173
TLI GL G A+ LF EM N E G EG + + +MK+
Sbjct: 228 TLIEGLCEAGRIDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLL-----MLRRMKE 282
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
P Y +V+ C EA+ +L EM ++G+ P VVT +++ CK G+M +
Sbjct: 283 LGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSD 342
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A R+L+LM G +PN + YN L+ GFC G+V++A L M + G +Y++LI
Sbjct: 343 ALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIR 402
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
G C + IE A L M G+ D YN L L + + ++A LFD ++ G+
Sbjct: 403 GQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKP 462
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ T+ + I+GLCK+ A + + C D Y+ I+ L
Sbjct: 463 NAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHL 509
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 187/377 (49%), Gaps = 16/377 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F +M P P ++N + L + L + +G PD YT+N LI +
Sbjct: 139 LFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGY 198
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ +V + ++ F + V++ +LI+GLC RI EA LF ++ +P++
Sbjct: 199 CRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD----QPDM 254
Query: 123 FTYNTLINGL---YRTGHTIVALNLFEEMASGNGEFGVEGFVD---------KAKELFLQ 170
Y L+ GL R ++ L +E+ VD +A+E+ +
Sbjct: 255 HMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQE 314
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M ++ + P VVT T+VI +C ++A +L M +G +PNV T+N ++ C GK
Sbjct: 315 MFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGK 374
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ +A LL+ M GV P+A YN L+ G C+ G + A L ME G ++Y+
Sbjct: 375 VHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNA 434
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LIN CK+ + A SL+ + ++GIKP+ V +N+L L + + + A+K ++M G
Sbjct: 435 LINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAG 494
Query: 351 VAADTWTYRTFIDGLCK 367
DT+TY +FI+ LCK
Sbjct: 495 CTPDTYTYSSFIEHLCK 511
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 168/363 (46%), Gaps = 23/363 (6%)
Query: 37 LSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 96
L + +R+ G P Y +++ C+ + +L + P VT T++I
Sbjct: 274 LLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINA 333
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG 156
C E R+ +A + +++ GC+PNV+TYN L+ G F
Sbjct: 334 YCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQG-----------------------FC 370
Query: 157 VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
EG V KA L +M+ +NPD VTY +IRG C A LL M G+ +
Sbjct: 371 NEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQY 430
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
T+N +++ LCK+G+ D+A L D + G++PNA +N+L++G C +G+ + A + M
Sbjct: 431 TYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKM 490
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
S GCT ++YS I CK K + LS GEML K +KP V Y + L +
Sbjct: 491 VSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNY 550
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
+ + EM G D TY T + C + EA + + +D AYN L
Sbjct: 551 GLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTL 610
Query: 397 IDG 399
+DG
Sbjct: 611 MDG 613
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 174/408 (42%), Gaps = 40/408 (9%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++ +R P V ++N L ++L ++ + G+ PD TYN+LI C G
Sbjct: 349 LMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDG 408
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ F +L + + T+ +LI LC + R +A +LF L G +PN T+N
Sbjct: 409 HIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFN 468
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
+LINGL ++G +A E+M S PD TY+S
Sbjct: 469 SLINGLCKSGKADIAWKFLEKMVSAG-----------------------CTPDTYTYSSF 505
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I C E + EM+ + V+P+ V + +++ +L K +R M+ G
Sbjct: 506 IEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGC 565
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+ Y T M +C+ GR+N A+ + + M G T +Y+ L++G+ + + A+S
Sbjct: 566 NPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVS 625
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE-----------------RAFKLFDEMQRD 349
+ +M S P+ Y L L + VE F LFD M+++
Sbjct: 626 ILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKN 685
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
++ TY + ++G ++ EA L ++ L+ Y L+
Sbjct: 686 EFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALV 733
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 176/450 (39%), Gaps = 64/450 (14%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N+L + H ++ L + + GL D YTYN LIN CK GR +
Sbjct: 392 PDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSL 451
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ PNAVTF SLI GLC + A K+ GC P+ +TY++ I L +
Sbjct: 452 FDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCK 511
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKEL------------FLQMKDENINPDVVT 182
+ L+ EM + + + +L + +M NPDVVT
Sbjct: 512 MKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVT 571
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+ +R +C NEA+ +L+EM GV + + +N +MD G+ D A +L M
Sbjct: 572 YTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMT 631
Query: 243 QIGVRPNAFVY------------------------------------------------- 253
+ PN F Y
Sbjct: 632 SVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNS 691
Query: 254 ---NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
+++++GF GR A L M+ + Y+ L+ +CK+K A L
Sbjct: 692 GTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCS 751
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M+ G P ++ Y L L Q ++A ++F + + D ++ IDGL K +
Sbjct: 752 MIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGH 811
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ E+ L + C + Y L + L
Sbjct: 812 SDISREMIIMLERMNCRPSHQTYAMLTEEL 841
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 183/382 (47%), Gaps = 25/382 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N L G K + L + G PD+ T++ ++ C G +S
Sbjct: 107 TYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRES 166
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ P++V F L+ GLC +++ EA + ++ G P+V TYN+LI+GL ++
Sbjct: 167 VEC--APDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYR- 223
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+++A++L M + P++VTY ++I G+C
Sbjct: 224 ----------------------MEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGL 261
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A L+ M+ G P+VVTFN ++ C+ K+D+A +L LM + PN YN L+
Sbjct: 262 AHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLIS 321
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G C GR N A EL M+ G + +Y+ LI +C+N +IE A + M+ +G+ P
Sbjct: 322 GLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIP 381
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
D + Y TL V L + + + AF L D M G + +T+ + ++GLC + + EA L
Sbjct: 382 DGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLL 441
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
+R + C+ Y L+ GL
Sbjct: 442 AVMRRVGCDPAASTYEVLVTGL 463
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 179/367 (48%), Gaps = 37/367 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L K+ + L + + + P+L TYN LI +CK G +
Sbjct: 206 PDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQL 265
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R+++S P+ VTF SLI G C +S+I +A + ++ C PN+ TYN LI+GL
Sbjct: 266 IERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCD 325
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G ++A EL +M I PD++TY S+I FC
Sbjct: 326 AGRA-----------------------NEACELLSEMDGRGILPDIITYNSLIGIFCRNF 362
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+A + M+++GV P+ +++ + L K+ + DEA LLD M G PN F +N
Sbjct: 363 QIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFN 422
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+LM+G C + R++ A+ L M +GC +Y +L+ G CK ++ A + M+S+
Sbjct: 423 SLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSE 482
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY--IV 372
GI+P V T+ L + + A FD++ VAA++ C SY ++
Sbjct: 483 GIQPLVSSSGTIVHTLAREGKQDLALHYFDQV----VAAESKA--------CDPSYQKLL 530
Query: 373 EAVELFR 379
E V++ R
Sbjct: 531 EFVKVLR 537
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 119/227 (52%), Gaps = 2/227 (0%)
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
++ + + +TY ++I GFC A D A LL EM ++G P+VVT + I+ LC G +
Sbjct: 99 QHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSR 158
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A + ++ P++ ++N L+ G C +++ A+++ M G V +Y+ LI+
Sbjct: 159 AMQYFRESVECA--PDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLID 216
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
G CK+ +E A L M+ + ++P++V YNTL + A +L + M + G
Sbjct: 217 GLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHP 276
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D T+ + I G C+ S I +A E+ ++ C ++ YN LI GL
Sbjct: 277 DVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGL 323
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 195/398 (48%), Gaps = 13/398 (3%)
Query: 13 SPPPVC-SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
+PPP S+N++ + + + +F + + P+ TYN +I+ K G + G
Sbjct: 58 APPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAG 117
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
F + +++ PNA+T+ L+ GLC R+ E +AL ++ P+ FTY+ L +G
Sbjct: 118 FRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDG 177
Query: 132 LYRTGHTIVALNLFEEMASGNGEFG------------VEGFVDKAKELFLQMKDENINPD 179
L R G + L+LF + G +G V A+E+ + + + P
Sbjct: 178 LSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPT 237
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
V Y ++I G+C + A +M + ++P+ +T+N +++ LCK ++ A LL
Sbjct: 238 RVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLM 297
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M GV P +NTL+D + TG++ + + M+ G V SY ++N +CKN
Sbjct: 298 EMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNG 357
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
+I A+++ +M K + P+ +YN + E ++AF L ++M+ +G++ TY
Sbjct: 358 KIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYN 417
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
I GLC S I EA E+ +L + D +YN LI
Sbjct: 418 LLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLI 455
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 180/367 (49%), Gaps = 23/367 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ILF L++N +LSLF + G+ YT +IL+N CK G+VS V
Sbjct: 166 PDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV 225
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ + P V + +LI G C + A + F +++ +P+ TYN LINGL +
Sbjct: 226 LQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCK 285
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ A++L ++M+D +NP V T+ ++I +
Sbjct: 286 AER-----------------------ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG 322
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ +L EM + G++PNVV++ I++ CKNGK+ EA +LD M V PNA VYN
Sbjct: 323 QLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYN 382
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
++D + G ++A L M+S G + ++ +Y++LI G C +I A + + +
Sbjct: 383 AIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNH 442
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
+ PD V YNTL +++A L M + G+ + TY I GL + E
Sbjct: 443 RLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEM 502
Query: 375 VELFRTL 381
L++ +
Sbjct: 503 EYLYQKM 509
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 153/339 (45%), Gaps = 24/339 (7%)
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+GR + G + + P+ + ++ A + EA + ++ G P
Sbjct: 1 ALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPP 60
Query: 121 -NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPD 179
N F+YN +I G++R G A+ +F+EM + + P+
Sbjct: 61 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMT-----------------------ERAVLPN 97
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
+TY ++I G D L +M+ G++PN +T+NV++ LC+ G+M E S LLD
Sbjct: 98 HITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLD 157
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M + P+ F Y+ L DG G LF G T ++ SIL+NG CK+
Sbjct: 158 EMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDG 217
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++ A + +++ G+ P VIYNTL + ++E AF F +M+ + D TY
Sbjct: 218 KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYN 277
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
I+GLCK I A +L ++ + +N LID
Sbjct: 278 ALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLID 316
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 136/314 (43%), Gaps = 24/314 (7%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F F M + R P ++N L L K + L + G+ P + T+N LI+
Sbjct: 258 FSTFGQMKS-RHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLID 316
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+ + G++ F+VL + + PN V++ S++ C +I EA A+ + P
Sbjct: 317 AYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLP 376
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
N YN +I+ G D+A L +MK I+P +
Sbjct: 377 NAQVYNAIIDAYVEHGPN-----------------------DQAFILVEKMKSNGISPSI 413
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY +I+G C + +EA+ ++ + + + P+ V++N ++ C G +D+A L
Sbjct: 414 VTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQR 473
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M + G++ Y+ L+ G GR+N + L+ M + ++I++ Y K
Sbjct: 474 MHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGN 533
Query: 301 IEGALSLYGEMLSK 314
A L EML K
Sbjct: 534 EIKAEDLRKEMLQK 547
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 189/387 (48%), Gaps = 11/387 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ + L + LF+ + G+ PD+YTY ILI+ FCK G + +
Sbjct: 286 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 345
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ +P VT+T+LI ++ +A +F ++ GC PN TY L++GL +
Sbjct: 346 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 405
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKA-KELFLQMKDEN-INPDVVTYTSVIRGFCY 192
G+ A ++ ++ G D A + + +D + + P+VVTY +++ G C
Sbjct: 406 AGNISKAFEVYAKLI---------GTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCK 456
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
A+ + A LL M+ G +PN + ++ ++D CK GK+D A + M + G P+
Sbjct: 457 AHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHT 516
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
Y +L+D GR++ A ++ M CT V +Y+ +I+G C+ E E AL L M
Sbjct: 517 YTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLME 576
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
KG P+VV Y L L + +++ + LF +M R G + + TYR I+ LC +
Sbjct: 577 EKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLD 636
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDG 399
+A L ++ ++ Y C I G
Sbjct: 637 KARLLLGEMKQTYWPKYLQGYRCAIQG 663
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 180/391 (46%), Gaps = 39/391 (9%)
Query: 26 CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTP 85
CL +D L K + G PD TY+ +I C +V F++ + TP
Sbjct: 262 CLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTP 321
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
+ T+T LI C I +A LF ++R GC P V TY LI+ +
Sbjct: 322 DVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ-------- 373
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA---KCL 202
V +A ++F +M D P+ VTY +++ G C A + ++A
Sbjct: 374 ---------------VPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK 418
Query: 203 LIEMMDQG-------------VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
LI D + PNVVT+ ++D LCK K+D A LLD M+ G PN
Sbjct: 419 LIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPN 478
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
VY+ L+DGFC G+++ A+E+F+ M G +V +Y+ LI+ K+ ++ A+ +
Sbjct: 479 HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 538
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
+ML P+VV Y + L I + E+A KL M+ G + + TY IDGL K
Sbjct: 539 QMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAG 598
Query: 370 YIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I +++LF + C + Y LI+ L
Sbjct: 599 KIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 629
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 182/416 (43%), Gaps = 32/416 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L K K +F R+ G P+ TY L++ CK G +S F V
Sbjct: 356 PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 415
Query: 75 LGRIL----------------RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC 118
+++ R PN VT+ +L+ GLC ++ A L + GC
Sbjct: 416 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 475
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKE 166
EPN Y+ LI+G + G A +F +M V +G +D A +
Sbjct: 476 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 535
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
+ QM ++ P+VVTYT++I G C + +A LL M ++G PNVVT+ ++D L
Sbjct: 536 VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 595
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
K GK+D + L M + G PN Y L++ C G +++A+ L M+ +
Sbjct: 596 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 655
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
Y I G+ +K +L + EM S G P +Y L + ++E A +L EM
Sbjct: 656 GYRCAIQGF--SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEM 713
Query: 347 QR--DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
V D Y + I LC S + EA L+ + ++ + CLI GL
Sbjct: 714 MEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGL 769
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 175/389 (44%), Gaps = 33/389 (8%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
L + ++D +S R+ P++ TY L++ F K ++ ++ ++ PN
Sbjct: 117 LMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPN 176
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
F SL+ C E A L ++ GC P YN I +
Sbjct: 177 PSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSI-------------- 222
Query: 147 EMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
G + +D A++++ +M N + V + R C +++A L+ EM
Sbjct: 223 ---CGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEM 279
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
M +G P+ T++ ++ LC K+++A L M +GV P+ + Y L+D FC G +
Sbjct: 280 MRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLI 339
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+A+ LF M S+GC+ TV +Y+ LI+ Y K K++ A ++ M+ G +P+ V Y L
Sbjct: 340 EQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGAL 399
Query: 327 FVVLFEIHQVERAFKLFDEM----------------QRDGVAADTWTYRTFIDGLCKNSY 370
L + + +AF+++ ++ R +A + TY +DGLCK
Sbjct: 400 VDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHK 459
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ A EL + CE + Y+ LIDG
Sbjct: 460 VDHAHELLDAMLSSGCEPNHIVYDALIDG 488
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 163/408 (39%), Gaps = 67/408 (16%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L L+ D + K ++ +G D +T + CK GR +
Sbjct: 38 PSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA--- 94
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L I R F + V T +I GL S EA + ++R C PNV TY TL++G +
Sbjct: 95 LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 154
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ K + M E NP+ + S++ +C
Sbjct: 155 KKQ-----------------------LGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEK 191
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN-------------------------- 228
D+ A LL M G P V +N+ + +C
Sbjct: 192 DYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVL 251
Query: 229 ---------------GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
GK D+A +L+ M++ G P+ Y+ ++ C +V +A LF
Sbjct: 252 NKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLF 311
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
M+ +G T V++Y+ILI+ +CK IE A L+ EM S G P VV Y L +
Sbjct: 312 QEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKA 371
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
QV +A +F M G + TY +DGLCK I +A E++ L
Sbjct: 372 KQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 419
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 136/335 (40%), Gaps = 50/335 (14%)
Query: 113 LRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN---GEFGVEGFVD------K 163
L+ FG P+ TYN L+ L G + + +EM+ F V F +
Sbjct: 31 LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
+ ++ E+ D V T +I G A+ ++EA L M PNVVT+ ++
Sbjct: 91 WADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLS 150
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
K ++ R++++M+ G PN ++N+L+ +C A +L M + GC
Sbjct: 151 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210
Query: 284 TVFSYSILINGYCKNKEIEG------ALSLYGEMLS------------------------ 313
Y+I I C +++ A +YGEML+
Sbjct: 211 GYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFD 270
Query: 314 -----------KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
KG PD Y+ + L +VE+AF LF EM+ GV D +TY I
Sbjct: 271 KAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILI 330
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
D CK I +A LF +R + C + Y LI
Sbjct: 331 DSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALI 365
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 90/219 (41%), Gaps = 16/219 (7%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++ + P V ++ L L K D L LF +++ G P+ TY +LIN C G
Sbjct: 574 LMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAG 633
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ ++LG + ++ + + I+G + + + ++ +G P Y
Sbjct: 634 LLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMESYGTVPIAPVYG 691
Query: 127 TLINGLYRTGHTIVALNLFEEM--------------ASGNGEFGVEGFVDKAKELFLQMK 172
LI+ + G +A+ L +EM AS + V++A L+ +M
Sbjct: 692 MLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMT 751
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
P++ + +I+G W+EA L + +GV
Sbjct: 752 RRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 790
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 77/199 (38%), Gaps = 11/199 (5%)
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
+ D G +P+ VT+N ++ L G++D R+ M + G + F C GR
Sbjct: 31 LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90
Query: 266 VNRAKELF----VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
A ++ ++++ CTH +I+G + + A+S M P+VV
Sbjct: 91 WADALDMIEREDFKLDTVLCTH-------MISGLMEASYFDEAMSFLHRMRCNSCIPNVV 143
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
Y TL + Q+ ++ + M +G + + + + C A +L +
Sbjct: 144 TYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRM 203
Query: 382 RILKCELDIRAYNCLIDGL 400
C YN I +
Sbjct: 204 TTCGCPPGYVVYNIFIGSI 222
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 62/183 (33%), Gaps = 7/183 (3%)
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
V T + C + D L D G RP+ YN L+ G+V+ +
Sbjct: 9 VATLRASLRRTCSHAAGDSEDPLKDF----GYRPSKVTYNALVQVLSSAGQVDLGFRVQK 64
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
M G F+ + CK AL + + + K D V+ + L E
Sbjct: 65 EMSESGFCMDRFTVGCFAHALCKEGRWADALDM---IEREDFKLDTVLCTHMISGLMEAS 121
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
+ A M+ + + TYRT + G K + + + C + +N
Sbjct: 122 YFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFN 181
Query: 395 CLI 397
L+
Sbjct: 182 SLV 184
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 126/429 (29%), Positives = 207/429 (48%), Gaps = 49/429 (11%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
NI+ L +N + L + + + PD+ +YN LIN CK ++ +L +
Sbjct: 1 MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+ PN+VT T+L+ GLC + R+ EA L ++ G + +V Y TLI+G G+
Sbjct: 61 AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120
Query: 140 VALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKDENINPDVVTYTSVI 187
LF+EM V G +A + M + I+PDVVTYT +I
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 180
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
G C A LL M+++G +P+ VT+NV++ LCK G + +A ++L +MI+ G +
Sbjct: 181 DGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKK 240
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMGCTH-TVFSYSILINGYCKNKEIEGAL 305
+ YNTLM G C G+V+ A +LF SM ++ C VF++++LI G CK + A+
Sbjct: 241 ADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAV 300
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG- 364
++ +M+ KG ++V YN L + +++ A +L+ ++ G +++TY IDG
Sbjct: 301 KIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 360
Query: 365 ----------------------------------LCKNSYIVEAVELFRTLRILKCELDI 390
LCK + +A LF+ + CE DI
Sbjct: 361 CKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDI 420
Query: 391 RAYNCLIDG 399
++N +IDG
Sbjct: 421 ISFNTMIDG 429
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 174/380 (45%), Gaps = 14/380 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L L K+ + L + G P TYN+L++ CK G V F +
Sbjct: 171 PDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKI 230
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGC-EPNVFTYNTLINGL 132
L ++ + VT+ +L+KGLC + ++ EA LF + C EPNVFT+N LI GL
Sbjct: 231 LRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGL 290
Query: 133 YRTGHTIVALNLFEEM----ASGN--------GEFGVEGFVDKAKELFLQMKDENINPDV 180
+ G A+ + +M + GN G G + +A EL+ Q+ D P+
Sbjct: 291 CKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNS 350
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
TY+ +I GFC N AK L EM G+ P + +N +M LCK G +++A L
Sbjct: 351 FTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQE 410
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M P+ +NT++DG G KEL + M MG ++S LIN K E
Sbjct: 411 MGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGE 470
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
++ A S M++ G PD ++Y++L L L +M G D T
Sbjct: 471 LDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVST 530
Query: 361 FIDGLCKNSYIVEAVELFRT 380
+ LC + V+ +EL T
Sbjct: 531 ILTCLCHSIQEVDVMELLPT 550
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 187/409 (45%), Gaps = 15/409 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD ML + V +++ L L + + ++ + G+ PD+ TY LI+
Sbjct: 125 LFDEMLG-KGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGL 183
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK GR +H +L ++ P+ VT+ L+ GLC E +++A + + G + +V
Sbjct: 184 CKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADV 243
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN--------------GEFGVEGFVDKAKELF 168
TYNTL+ GL G AL LF M G EG + KA ++
Sbjct: 244 VTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIH 303
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+M + ++VTY ++ G A EA L +++D G PN T+++++D CK
Sbjct: 304 RKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKM 363
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
++ A L M G+ P F YNTLM C G + +AK LF M + C + S+
Sbjct: 364 RMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISF 423
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ +I+G K + + L +M+ G++PD + ++TL L ++ +++ A + M
Sbjct: 424 NTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVA 483
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
G D Y + + GL E + L + LD + + ++
Sbjct: 484 SGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTIL 532
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 130/242 (53%)
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
G V +A L +M ++++PD+V+Y ++I G C A EA LL+EM G PN VT
Sbjct: 12 GGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTC 71
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
+MD LCK+G+MDEA LL+ M + G + +Y TL+ GFC G ++R KELF M
Sbjct: 72 TTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLG 131
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
G + V +YS L++G C+ + + A ++ M GI PDVV Y L L + +
Sbjct: 132 KGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATH 191
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A L + M G TY + GLCK +++A ++ R + + D+ YN L+
Sbjct: 192 AMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMK 251
Query: 399 GL 400
GL
Sbjct: 252 GL 253
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 94/183 (51%)
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
N+++ LC+NG + EA L+ M + V P+ YNTL++G C ++ A L + ME
Sbjct: 1 MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
+ GC + + L++G CK+ ++ A+ L M KG DVV+Y TL ++
Sbjct: 61 AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
R +LFDEM G++A+ TY + GLC+ EA + + D+ Y LI
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 180
Query: 398 DGL 400
DGL
Sbjct: 181 DGL 183
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 4/161 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + SFN + K + V L ++ GL PD T++ LIN K+G +
Sbjct: 418 PDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSA 477
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R++ S FTP+A+ + SL+KGL ++ E L ++ G + +T++ L
Sbjct: 478 LERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCH 537
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDEN 175
+ + + L G EG EL +Q+ +
Sbjct: 538 SIQEVDVMELLPTFFQGTS----EGASISCNELLMQLHQSH 574
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 123/389 (31%), Positives = 198/389 (50%), Gaps = 15/389 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ M+ R P V + N + L L +++ + G+ P + TYN +++ F
Sbjct: 189 VFEKMMRNR-FLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSF 247
Query: 63 CKMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK G V ++ ++ R C+ P+ VTF LI GL + + +A L ++ G +
Sbjct: 248 CKGGEVQRALDLVPKMQERGCY-PSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVS 306
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEM---------ASGNG---EFGVEGFVDKAKELFL 169
+TYN LI G + G + AL L+EEM AS N F EG + A++
Sbjct: 307 PYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLS 366
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
M +N+ PD+++Y ++I GFC + EA LL E+ + + N+VT+N ++D LC+ G
Sbjct: 367 DMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLG 426
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
++ A +L + MI G+ P+ Y L++G C G + AKE F M +G F+Y+
Sbjct: 427 DLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYT 486
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
I G K + A L EML+KG PDV+ YN L ++ +E A +L +M RD
Sbjct: 487 ARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRD 546
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELF 378
G D TY +F+ +N ++ E E+F
Sbjct: 547 GHVPDHVTYTSFMHAHMENGHLREGREIF 575
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/359 (32%), Positives = 187/359 (52%), Gaps = 14/359 (3%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 95
L+L++ + + G+ P + ++N ++ FCK G++S L +L+ P+ +++ +LI
Sbjct: 326 ALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIY 385
Query: 96 GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG---- 151
G C I EA L +LR N+ TYNTLI+GL R G AL L E+M +
Sbjct: 386 GFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHP 445
Query: 152 ---------NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
NG + G + AKE F +M + PD YT+ I G D +A L
Sbjct: 446 DVVTYTVLVNGACKL-GNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKL 504
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
EM+ +G P+V+T+NV ++ LCK G ++EA LL MI+ G P+ Y + M
Sbjct: 505 QEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHME 564
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G + +E+F M S G T TV +Y++LI+ + N ++ A++ + EM KG+ P+V+
Sbjct: 565 NGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVIT 624
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
YN L ++ ++++A K F EMQ G+ + +TY I+ C EA+ L+ +
Sbjct: 625 YNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQM 683
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 182/385 (47%), Gaps = 17/385 (4%)
Query: 11 RPSPPPVCSFN-ILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS 69
R P V S N I++G + K D L L L PD+ +YN LI FC++G +
Sbjct: 336 RGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKN-LMPDIISYNTLIYGFCRLGNIG 394
Query: 70 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
F++L + + N VT+ +LI GLC + A L + G P+V TY L+
Sbjct: 395 EAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLV 454
Query: 130 NGLYRTGHTIVALNLFEEM-------------ASGNGEFGVEGFVDKAKELFLQMKDENI 176
NG + G+ ++A F+EM A GE + G KA +L +M +
Sbjct: 455 NGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKL-GDTAKAFKLQEEMLTKGF 513
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
PDV+TY + G C + EA LL +M+ G P+ VT+ M +NG + E
Sbjct: 514 PPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGRE 573
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+ M+ G P Y L+ L GR++ A F+ M+ G V +Y++LING+C
Sbjct: 574 IFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFC 633
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K ++++ A + EM KGI P+ Y L + + + A +L+ +M + D+
Sbjct: 634 KVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSC 693
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTL 381
T+ + L K+ Y V+AV+ +L
Sbjct: 694 THGALLKKLDKD-YKVQAVQFIESL 717
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 129/237 (54%)
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
KA E++ M + I P V TY +++ FC + A L+ +M ++G P+ VTFNV++
Sbjct: 220 KALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLI 279
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
+ L K G++ +A L+ M + G+R + + YN L+ G+C G + A L+ M + G +
Sbjct: 280 NGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVS 339
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
TV S++ ++ G+CK ++ A +ML K + PD++ YNTL + + AF L
Sbjct: 340 PTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFIL 399
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
DE++ ++ + TY T IDGLC+ + A++L + D+ Y L++G
Sbjct: 400 LDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNG 456
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 154/328 (46%), Gaps = 23/328 (7%)
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
+V +++R+ F P+ ++K L ++ +++A ++ + +G P V TYNT+++
Sbjct: 187 LLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHS 246
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
+ G V +A +L +M++ P VT+ +I G
Sbjct: 247 FCKGGE-----------------------VQRALDLVPKMQERGCYPSEVTFNVLINGLS 283
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
+ +AK L+ EM G++ + T+N ++ CK G + EA L + M+ GV P
Sbjct: 284 KKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVA 343
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
+NT+M GFC G+++ A++ M + SY+ LI G+C+ I A L E+
Sbjct: 344 SHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDEL 403
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
+ + ++V YNTL L + +E A KL ++M G+ D TY ++G CK +
Sbjct: 404 RFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNM 463
Query: 372 VEAVELFRTLRILKCELDIRAYNCLIDG 399
+ A E F + + D AY I G
Sbjct: 464 LMAKEFFDEMLHVGLAPDQFAYTARIVG 491
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 115/234 (49%)
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
+F +M PDV +++ N +A + M + G++P V T+N ++ C
Sbjct: 189 VFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFC 248
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
K G++ A L+ M + G P+ +N L++G G + +AK L M G + +
Sbjct: 249 KGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPY 308
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+Y+ LI GYCK + AL+L+ EM+++G+ P V +NT+ + ++ A + +M
Sbjct: 309 TYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDM 368
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + D +Y T I G C+ I EA L LR +I YN LIDGL
Sbjct: 369 LKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGL 422
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 108/234 (46%), Gaps = 24/234 (10%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP V ++N+ L K + + L +++ G PD TY ++ + G + G
Sbjct: 514 PPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGRE 573
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ +L TP VT+T LI R+ A A F +++ G PNV TYN LING
Sbjct: 574 IFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFC 633
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ +D+A + F++M+++ I P+ TYT +I C
Sbjct: 634 KVRK-----------------------MDQACKFFIEMQEKGIFPNKYTYTILINENCNM 670
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
W EA L +M+ + ++P+ T ++ +L K+ K+ +A + ++ +I G R
Sbjct: 671 GKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKV-QAVQFIESLILDGDR 723
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 2/146 (1%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF ML+ R P V ++ +L A N D ++ F + G+ P++ TYN+LIN F
Sbjct: 574 IFYDMLS-RGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGF 632
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK+ ++ + PN T+T LI C + EA L+ ++ P+
Sbjct: 633 CKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDS 692
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEM 148
T+ L+ L + + + A+ E +
Sbjct: 693 CTHGALLKKLDK-DYKVQAVQFIESL 717
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 58/140 (41%), Gaps = 10/140 (7%)
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
CL E +S E G +LI GY + L ++ +M+ PDV
Sbjct: 153 CLMKSAYWVMERIISFEMYGIV------DVLIGGYLNYQ----CLLVFEKMMRNRFLPDV 202
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
N + +L + + + +A +++ M G+ TY T + CK + A++L
Sbjct: 203 KNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPK 262
Query: 381 LRILKCELDIRAYNCLIDGL 400
++ C +N LI+GL
Sbjct: 263 MQERGCYPSEVTFNVLINGL 282
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 193/368 (52%), Gaps = 12/368 (3%)
Query: 45 STGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 104
S G P + TYN ++ CK GRVS +L ++ P+ V++ +LI G I
Sbjct: 300 SRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIG 359
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------- 157
EA LF +LR P+V TYNTLI+GL R G VA+ L +EM + V
Sbjct: 360 EAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFV 419
Query: 158 EGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
GF + AKELF +M + + PD Y + I G D ++A + EM+ +G
Sbjct: 420 RGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFP 479
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
P+++T+NV +D L K G + EAS L+ M+ G+ P+ Y +++ + G + +A+ L
Sbjct: 480 PDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAL 539
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
F+ M S G +V +Y++LI+ Y ++ A+ + EM KG+ P+V+ YN L L +
Sbjct: 540 FLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCK 599
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
+ ++++A+ F EMQ G++ + +TY I+ C + EA+ L++ + + + D
Sbjct: 600 VRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCT 659
Query: 393 YNCLIDGL 400
+ L+ L
Sbjct: 660 HRSLLKHL 667
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 176/382 (46%), Gaps = 24/382 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC-KMGRVSHGFVVLGRI 78
++L K + L +F ++ S GL PD+ N ++ + + V +
Sbjct: 134 LDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVM 193
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ P VT+ +++ C + + EA L +++ GC PN TYN L+NGL +G
Sbjct: 194 VECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGE- 252
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+++AKEL M + V TY +IRG+C E
Sbjct: 253 ----------------------MEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEE 290
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A L EM+ +G P VVT+N IM LCK G++ +A +LLD+M+ + P+ YNTL+
Sbjct: 291 ASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIY 350
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G+ G + A LF + +V +Y+ LI+G C+ +++ A+ L EM+ G P
Sbjct: 351 GYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDP 410
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
DV + T ++ + A +LFDEM G+ D + Y T I G K +A +
Sbjct: 411 DVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQ 470
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
+ D+ YN IDGL
Sbjct: 471 EEMLARGFPPDLITYNVFIDGL 492
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 102/235 (43%), Gaps = 24/235 (10%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP + ++N+ L K + L K++ GL PD TY +I+ G +
Sbjct: 476 RGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRK 535
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ +L P+ VT+T LI R+ A F ++ G PNV TYN LIN
Sbjct: 536 ARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALIN 595
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
GL + +D+A F +M+ + I+P+ TYT +I
Sbjct: 596 GLCKVRK-----------------------MDQAYNFFAEMQAKGISPNKYTYTILINEN 632
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
C W EA L +M+D+ +QP+ T ++ L K+ K+ R L+ +I G
Sbjct: 633 CNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKL-HVVRHLENVIAAG 686
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 98/242 (40%), Gaps = 51/242 (21%)
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEA------------------------------SRLLD 239
G + + ++++VI+D L +NG M A +LD
Sbjct: 76 GFKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKMENGVIDVVSSSEVSMPSVKLILD 135
Query: 240 LMIQIGVRPN----------AFVYNTLMDGFCLTGRVNR-----------AKELFVSMES 278
L++ I V+ + V L+ RV R A+E++ M
Sbjct: 136 LLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVE 195
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
G TV +Y+ +++ +CK ++ AL L +M + G P+ V YN L L ++E+
Sbjct: 196 CGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQ 255
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A +L +M R G+ +TY I G C+ I EA L + + YN ++
Sbjct: 256 AKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMY 315
Query: 399 GL 400
GL
Sbjct: 316 GL 317
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 201/399 (50%), Gaps = 12/399 (3%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P + ++N + K + + L + S G+ D+ TYN+LI+ C+ R++ G++
Sbjct: 225 APTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL 284
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L + + PN VT+ +LI G E +++ A+ L ++ FG PN T+N LI+G
Sbjct: 285 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 344
Query: 134 RTGHTIVALNLFEEMAS-----GNGEFGV--EGF-----VDKAKELFLQMKDENINPDVV 181
G+ AL +F M + +GV +G D A+ +++MK + +
Sbjct: 345 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 404
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT +I G C +EA LL EM G+ P++VT++ +++ CK G+ A ++ +
Sbjct: 405 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 464
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++G+ PN +Y+TL+ C G + A ++ +M G T F++++L+ CK ++
Sbjct: 465 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 524
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A M S GI P+ V ++ L + +AF +FDEM + G +TY +
Sbjct: 525 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 584
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ GLCK ++ EA + ++L + +D YN L+ +
Sbjct: 585 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 623
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 171/376 (45%), Gaps = 32/376 (8%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
S P V ++IL + L +F+ + G P +YT N ++ K G +
Sbjct: 121 SNPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
L +L+ P+ TF LI LCAE +++ L K+ G P + TYNT+++
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ G A+ L + MK + ++ DV TY +I C
Sbjct: 239 CKKGRFKAAIELLD-----------------------HMKSKGVDADVCTYNMLIHDLCR 275
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
+N + LL +M + + PN VT+N +++ GK+ AS+LL+ M+ G+ PN
Sbjct: 276 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
+N L+DG G A ++F ME+ G T + SY +L++G CKN E + A Y M
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
G+ + Y + L + ++ A L +EM +DG+ D TY I+G CK
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCK----- 450
Query: 373 EAVELFRTLRILKCEL 388
V F+T + + C +
Sbjct: 451 --VGRFKTAKEIVCRI 464
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 168/346 (48%), Gaps = 13/346 (3%)
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
G+ S F L R C N + LI+ E I ++ +F + ++G P+V+T
Sbjct: 103 GKSSFVFGALMTTYRLC-NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTC 161
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGN-----GEFGV-------EGFVDKAKELFLQMKD 173
N ++ + ++G + + +EM F + EG +K+ L +M+
Sbjct: 162 NAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEK 221
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
P +VTY +V+ +C + A LL M +GV +V T+N+++ +LC++ ++ +
Sbjct: 222 SGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAK 281
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
LL M + + PN YNTL++GF G+V A +L M S G + +++ LI+
Sbjct: 282 GYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALID 341
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
G+ + AL ++ M +KG+ P V Y L L + + + A + M+R+GV
Sbjct: 342 GHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCV 401
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
TY IDGLCKN ++ EAV L + + DI Y+ LI+G
Sbjct: 402 GRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 447
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 167/379 (44%), Gaps = 19/379 (5%)
Query: 24 FGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCF 83
GCL + + +++ + G D +T+N+L+ CK G+V+ + +
Sbjct: 486 MGCLKE------AIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539
Query: 84 TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALN 143
PN V+F LI G ++A ++F ++ G P FTY +L+ GL + GH A
Sbjct: 540 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK 599
Query: 144 LFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
+ + + G + KA LF +M +I PD TYTS+I G C
Sbjct: 600 FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC 659
Query: 192 YANDWNEAKCLLIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
A E +G V PN V + +D + K G+ + M +G P+
Sbjct: 660 RKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDI 719
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
N ++DG+ G++ + +L M + + +Y+IL++GY K K++ + LY
Sbjct: 720 VTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRS 779
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
++ GI PD + ++L + + E + +E K+ GV D +T+ I C N
Sbjct: 780 IILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGE 839
Query: 371 IVEAVELFRTLRILKCELD 389
I A +L + + L LD
Sbjct: 840 INWAFDLVKVMTSLGISLD 858
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/449 (22%), Positives = 191/449 (42%), Gaps = 51/449 (11%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +FD M + P ++ L L K H K L++ D YN L+
Sbjct: 563 FSVFDEMTKV-GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 621
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CE 119
CK G ++ + G +++ P++ T+TSLI GLC + + + A + G
Sbjct: 622 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL 681
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEM-------------ASGNGEFGVEGFVDKAKE 166
PN Y ++G+++ G + E+M A +G + G ++K +
Sbjct: 682 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG-YSRMGKIEKTND 740
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
L +M ++N P++ TY ++ G+ D + + L ++ G+ P+ +T + ++ +C
Sbjct: 741 LLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGIC 800
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT---- 282
++ ++ ++L I GV + + +N L+ C G +N A +L M S+G +
Sbjct: 801 ESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKD 860
Query: 283 ----------------------HTVFSYSI---------LINGYCKNKEIEGALSLYGEM 311
H + I LING C+ +I+ A + EM
Sbjct: 861 TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 920
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
++ I P V + + L + + + A L M + + ++ T + CKN +
Sbjct: 921 IAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNV 980
Query: 372 VEAVELFRTLRILKCELDIRAYNCLIDGL 400
+EA+EL + +LD+ +YN LI GL
Sbjct: 981 IEALELRVVMSNCGLKLDLVSYNVLITGL 1009
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 163/367 (44%), Gaps = 15/367 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P SF+ L + S+F + G P +TY L+ CK G +
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + V + +L+ +C + +A +LF ++ P+ +TY +LI+GL R
Sbjct: 601 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 660
Query: 135 TGHTIVALNLFEEMASGNG-----EFGVEGFVD--------KAKELFL-QMKDENINPDV 180
G T++A+ LF + A G + FVD KA F QM + PD+
Sbjct: 661 KGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDI 719
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VT ++I G+ + LL EM +Q PN+ T+N+++ K + + L
Sbjct: 720 VTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRS 779
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+I G+ P+ ++L+ G C + + ++ + G +++++LI+ C N E
Sbjct: 780 IILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGE 839
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
I A L M S GI D + + VL H+ + + + EM + G++ ++ Y
Sbjct: 840 INWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIG 899
Query: 361 FIDGLCK 367
I+GLC+
Sbjct: 900 LINGLCR 906
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 156/355 (43%), Gaps = 25/355 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + N + ++ + L + + P+L TYNIL++ + K VS F++
Sbjct: 717 PDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL 776
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV-FGCEPNVFTYNTLINGLY 133
I+ + P+ +T SL+ G+C ES ++E K + G E + +T+N LI+
Sbjct: 777 YRSIILNGILPDKLTCHSLVLGIC-ESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCC 835
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVD----------------KAKELFLQMKDENIN 177
G A +L + M S G+ D +++ + +M + I+
Sbjct: 836 ANGEINWAFDLVKVMTS----LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGIS 891
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P+ Y +I G C D A + EM+ + P V + ++ L K GK DEA+ L
Sbjct: 892 PESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLL 951
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
L M+++ + P + TLM C G V A EL V M + G + SY++LI G C
Sbjct: 952 LRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCA 1011
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
++ A LY EM G + Y L L E AF D + +D +A
Sbjct: 1012 KGDMALAFELYEEMKGDGFLANATTYKALIRGLL---ARETAFSGADIILKDLLA 1063
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%)
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
N VY+ L+ + G + + E+F M G +V++ + ++ K+ E S
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
EML + I PDV +N L VL E++ L +M++ G A TY T + CK
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
A+EL ++ + D+ YN LI L
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDL 273
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ +ML M+ P + SF L KN + L L +++ GL DL +YN+LI
Sbjct: 951 LLRFMLKMKLVPT-IASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1009
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 112
C G ++ F + + F NA T+ +LI+GL A A + K
Sbjct: 1010 CAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1059
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 180/349 (51%), Gaps = 23/349 (6%)
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 110
D+Y++ I+I C+ G + F +L + F+PN V +T+LI G C + I +A LF
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQ 170
++ FG N +TY LI+GL++ G +GF E++ +
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNG------------------IKKQGF-----EMYEK 258
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M++ + P++ TY V+ C +A + EM ++GV N+VT+N ++ LC+ K
Sbjct: 259 MQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+EA+ ++D M G+ PN YNTL+DGFC ++ +A L ++S G + ++ +Y+I
Sbjct: 319 ANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L++G+CK + GA + EM +GIKP V Y L +E+A +L M+ G
Sbjct: 379 LVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELG 438
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ D TY I G C + EA LF+++ K E + YN ++ G
Sbjct: 439 LTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLG 487
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 191/381 (50%), Gaps = 27/381 (7%)
Query: 4 FDYMLNMRP---SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
FD ++ +R SP V ++ GC K + + LF + GL + +TY +LI+
Sbjct: 183 FDLLVELREFGFSPNVVIYTTLIDGCCKKGE-IEKAKDLFFEMGKFGLVANEWTYTVLIH 241
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
K G GF + ++ PN T+ ++ LC + R +A +F ++R G
Sbjct: 242 GLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSC 301
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
N+ TYNTLI GL R EM + ++A E+ QMK + INP++
Sbjct: 302 NIVTYNTLIGGLCR------------EMKA-----------NEANEVMDQMKSDGINPNL 338
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+TY ++I GFC +A L ++ +G+ P++VT+N+++ CK G A +++
Sbjct: 339 ITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKE 398
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M + G++P+ Y L+D F + + +A +L SME +G T V +YS+LI+G+C
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGR 458
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ A L+ M+ K +P+ VIYNT+ + + RA +LF EM+ + + +YR
Sbjct: 459 MNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRY 518
Query: 361 FIDGLCKNSYIVEAVELFRTL 381
I+ LCK EA L +
Sbjct: 519 MIEVLCKERKSKEAEGLVEKM 539
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 169/334 (50%), Gaps = 23/334 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ +L L KN +++++ G+FP+L+TYN ++N CK GR F V +
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEM 294
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ N VT+ +LI GLC E + EA + +++ G PN+ TYNTLI+G
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGF------ 348
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
G + G KA L +K ++P +VTY ++ GFC D +
Sbjct: 349 -----------CGVRKLG------KALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSG 391
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A ++ EM ++G++P+ VT+ +++D ++ M++A +L M ++G+ P+ Y+ L+
Sbjct: 392 AGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIH 451
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
GFC+ GR+N A LF SM Y+ ++ GYCK AL L+ EM K + P
Sbjct: 452 GFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPP 511
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
+V Y + VL + + + A L ++M G+
Sbjct: 512 NVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIG 545
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 1/218 (0%)
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I + + + + EM+D+G P FN ++ + + ++ +
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFN-ES 155
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+I V + + + ++ G C G + ++ +L V + G + V Y+ LI+G CK EIE
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ EM G+ + Y L LF+ ++ F+++++MQ GV + TY +
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVM 275
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ LCK+ +A ++F +R +I YN LI GL
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGL 313
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/433 (30%), Positives = 197/433 (45%), Gaps = 38/433 (8%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F M R P P S N L L+K D FK + + G+ ++TYNI+I+ C
Sbjct: 9 FLKMRKFRVFPKPR-SCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLC 67
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K G + + ++ + FTP+ VT+ SLI G + E +F +++ C+P+V
Sbjct: 68 KEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVI 127
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQ 170
TYN LIN + A EM + NG F EG + +A + F+
Sbjct: 128 TYNALINCFCKFERMPKAFEFLHEMKA-NGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVD 186
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M+ + P+ TYTS+I C A + EA L+ E++ G++ NVVT+ ++D LC+ G+
Sbjct: 187 MRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGR 246
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
M EA + M+ GV PN Y L+ GF + AK++ M+ + Y
Sbjct: 247 MKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGT 306
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV-------------- 336
++ G C +E A L GE+ GI + VIY TL F+ Q
Sbjct: 307 ILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLV 366
Query: 337 ---------ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
E A KLFDEM G+ D Y IDG K+ + EA+ L + + E
Sbjct: 367 DGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGME 426
Query: 388 LDIRAYNCLIDGL 400
LD+ AY LI GL
Sbjct: 427 LDLHAYTALIWGL 439
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 185/395 (46%), Gaps = 24/395 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N L K D + +F+++ PD+ TYN LINCFCK R+ F
Sbjct: 89 PDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEF 148
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + PN VT+++ I C E + EA F +R PN FTY +LI+ +
Sbjct: 149 LHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCK 208
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G+ AL L EE+ + V EG + +A+E+F M + + P+ T
Sbjct: 209 AGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQET 268
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+++ GF A + AK +L EM ++ ++P+++ + I+ LC +++EA L+ +
Sbjct: 269 YTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIK 328
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ NA +Y TLMD + +G+ A L M L++G CKN E
Sbjct: 329 ESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD------------LVDGLCKNNCFE 376
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ EML KG+ PD + Y L + ++ A L D M G+ D Y I
Sbjct: 377 VAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALI 436
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
GL + + +A L + D Y CLI
Sbjct: 437 WGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLI 471
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 152/308 (49%), Gaps = 12/308 (3%)
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------- 157
EA+ F K+R F P + N L++ L + G ++ F++M + + V
Sbjct: 4 EASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMI 63
Query: 158 -----EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
EG ++ A+ LF QMK+ PD+VTY S+I G +E C+ +M D
Sbjct: 64 DYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCD 123
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
P+V+T+N +++ CK +M +A L M G++PN Y+T +D FC G + A +
Sbjct: 124 PDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKF 183
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
FV M + T F+Y+ LI+ CK + AL L E+L GIK +VV Y L L E
Sbjct: 184 FVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCE 243
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
+++ A ++F M GVA + TY + G K + A ++ + ++ + D+
Sbjct: 244 EGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLL 303
Query: 393 YNCLIDGL 400
Y ++ GL
Sbjct: 304 YGTILWGL 311
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 35/204 (17%)
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
++EAS M + V P N L+ GR + +++ F M + G +VF+Y+I
Sbjct: 2 LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF------------VVLFE------ 332
+I+ CK ++E A SL+ +M G PD+V YN+L + +FE
Sbjct: 62 MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121
Query: 333 -----------------IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
++ +AF+ EM+ +G+ + TY TFID CK + EA+
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181
Query: 376 ELFRTLRILKCELDIRAYNCLIDG 399
+ F +R + + Y LID
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDA 205
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 195/398 (48%), Gaps = 13/398 (3%)
Query: 13 SPPPVC-SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
+PPP S+N++ + + + +F + + P+ TYN +I+ K G + G
Sbjct: 10 APPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAG 69
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
F + +++ PNA+T+ L+ GLC R+ E +AL ++ P+ FTY+ L +G
Sbjct: 70 FRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDG 129
Query: 132 LYRTGHTIVALNLFEEMASGNGEFG------------VEGFVDKAKELFLQMKDENINPD 179
L R G + L+LF + G +G V A+E+ + + + P
Sbjct: 130 LSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPT 189
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
V Y ++I G+C + A +M + ++P+ +T+N +++ LCK ++ A LL
Sbjct: 190 RVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLM 249
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M GV P +NTL+D + TG++ + + M+ G V SY ++N +CKN
Sbjct: 250 EMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNG 309
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
+I A+++ +M K + P+ +YN + E ++AF L ++M+ +G++ TY
Sbjct: 310 KIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYN 369
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
I GLC S I EA E+ +L + D +YN LI
Sbjct: 370 LLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLI 407
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 180/367 (49%), Gaps = 23/367 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ILF L++N +LSLF + G+ YT +IL+N CK G+VS V
Sbjct: 118 PDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV 177
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ + P V + +LI G C + A + F +++ +P+ TYN LINGL +
Sbjct: 178 LQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCK 237
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ A++L ++M+D +NP V T+ ++I +
Sbjct: 238 AER-----------------------ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG 274
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ +L EM + G++PNVV++ I++ CKNGK+ EA +LD M V PNA VYN
Sbjct: 275 QLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYN 334
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
++D + G ++A L M+S G + ++ +Y++LI G C +I A + + +
Sbjct: 335 AIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNH 394
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
+ PD V YNTL +++A L M + G+ + TY I GL + E
Sbjct: 395 RLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEM 454
Query: 375 VELFRTL 381
L++ +
Sbjct: 455 EYLYQKM 461
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 133/279 (47%), Gaps = 23/279 (8%)
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPD 179
PN F+YN +I G++R G A+ +F+EM + + P+
Sbjct: 13 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMT-----------------------ERAVLPN 49
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
+TY ++I G D L +M+ G++PN +T+NV++ LC+ G+M E S LLD
Sbjct: 50 HITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLD 109
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M + P+ F Y+ L DG G LF G T ++ SIL+NG CK+
Sbjct: 110 EMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDG 169
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++ A + +++ G+ P VIYNTL + ++E AF F +M+ + D TY
Sbjct: 170 KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYN 229
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
I+GLCK I A +L ++ + +N LID
Sbjct: 230 ALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLID 268
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 136/314 (43%), Gaps = 24/314 (7%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F F M + R P ++N L L K + L + G+ P + T+N LI+
Sbjct: 210 FSTFGQMKS-RHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLID 268
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+ + G++ F+VL + + PN V++ S++ C +I EA A+ + P
Sbjct: 269 AYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLP 328
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
N YN +I+ G D+A L +MK I+P +
Sbjct: 329 NAQVYNAIIDAYVEHGPN-----------------------DQAFILVEKMKSNGISPSI 365
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY +I+G C + +EA+ ++ + + + P+ V++N ++ C G +D+A L
Sbjct: 366 VTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQR 425
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M + G++ Y+ L+ G GR+N + L+ M + ++I++ Y K
Sbjct: 426 MHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGN 485
Query: 301 IEGALSLYGEMLSK 314
A L EML K
Sbjct: 486 EIKAEDLRKEMLQK 499
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/360 (31%), Positives = 175/360 (48%), Gaps = 23/360 (6%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP V FNIL K +F ++ GL P + ++N LI+ +C+ V GFV
Sbjct: 223 PPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFV 282
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ + +P+ T+++LI GLC ESR+ EA LF ++ G PN T+ TLI+G
Sbjct: 283 LKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQC 342
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ G +AL FE MKD I PD++TY ++I G C
Sbjct: 343 KHGKIDLALRNFE-----------------------IMKDRGIRPDLITYNALINGLCRD 379
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
D EA+ LL EM+ G +P+ +TF +MD CK+G MD A + D M++ G+ + +
Sbjct: 380 GDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAF 439
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
L+ G C GRV A+ + M S G +Y+++I+ +CK +++ L EM
Sbjct: 440 TALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQR 499
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
G P VV YN L + Q++ A L M V + T+ +DG CK+ V+
Sbjct: 500 DGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSVD 559
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 169/349 (48%), Gaps = 26/349 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V SFN L ++K+ + L + S + PD++TY+ LIN CK RV +
Sbjct: 259 PSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGL 318
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ PN VTFT+LI G C +I A F ++ G P++ TYN LINGL R
Sbjct: 319 FDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCR 378
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G A L EM GNG PD +T+T+++ G C
Sbjct: 379 DGDLKEARKLLNEMI-GNG----------------------FKPDKITFTTLMDGCCKDG 415
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
D + A + M+++G++ + V F ++ LC++G++ +A R+L M+ G +P+ Y
Sbjct: 416 DMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYT 475
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
++D FC G V +L M+ G V +Y+ L+NG+CK +++ A L ML+
Sbjct: 476 MVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNM 535
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
+ P+ + +N L + H FK+F+ + G+ +D +Y ++
Sbjct: 536 EVVPNDITFNILLDGHCK-HGSSVDFKIFNGEK--GLVSDYASYTALVN 581
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 159/323 (49%), Gaps = 23/323 (7%)
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
+L + PN F L+ G C +M A +F ++ G P+V ++NTLI+G R
Sbjct: 217 VLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCR--- 273
Query: 138 TIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
S N E EGFV K+ M+ E I+PDV TY+++I G C +
Sbjct: 274 ------------SKNVE---EGFVLKS-----VMESERISPDVFTYSALINGLCKESRVE 313
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
EA L EM + G+ PN VTF ++D CK+GK+D A R ++M G+RP+ YN L+
Sbjct: 314 EANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALI 373
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
+G C G + A++L M G +++ L++G CK+ +++ AL + M+ +GI+
Sbjct: 374 NGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIE 433
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
D V + L L +V A ++ +M G D TY ID CK + +L
Sbjct: 434 LDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKL 493
Query: 378 FRTLRILKCELDIRAYNCLIDGL 400
+ ++ + YN L++G
Sbjct: 494 LKEMQRDGRVPGVVTYNALMNGF 516
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 126/235 (53%)
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
E +L++ D P+V + ++ GFC D A+ + E+ +G++P+VV+FN ++
Sbjct: 212 EFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGY 271
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
C++ ++E L +M + P+ F Y+ L++G C RV A LF M MG
Sbjct: 272 CRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNG 331
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
+++ LI+G CK+ +I+ AL + M +GI+PD++ YN L L ++ A KL +E
Sbjct: 332 VTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNE 391
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
M +G D T+ T +DG CK+ + A+E+ + ELD A+ LI GL
Sbjct: 392 MIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGL 446
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 184/380 (48%), Gaps = 23/380 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+N + L K D L + + + S G+ PD+YTY+ILI+ FCK G V G ++ +
Sbjct: 328 YNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMK 387
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
S P+ V+++SL GLC + + +F L G + + Y+ LI G
Sbjct: 388 YSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKG-------- 439
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
F ++G +D A +L +M N+ PD + S++ GFC W A
Sbjct: 440 ---------------FCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNA 484
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
M++ G+ P++ T NVI+D C+ G+++EA L++ M G+ PN F YN +++
Sbjct: 485 LEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINR 544
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
C + RA ELF M +V YS LI+G+ K + AL LY ML G+ PD
Sbjct: 545 LCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPD 604
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
+V Y L +L ++ A+ LF +M +G+ D +Y + I G C+ + +A LF
Sbjct: 605 MVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFN 664
Query: 380 TLRILKCELDIRAYNCLIDG 399
+ + Y L+DG
Sbjct: 665 EMLQRGHLPTVVTYTSLVDG 684
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 177/362 (48%), Gaps = 15/362 (4%)
Query: 9 NMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV 68
NM PS + S++ LF L K + D L +F+ L + G D Y+ILI FC G +
Sbjct: 390 NMEPS---LVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDL 446
Query: 69 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTL 128
++ ++R+ P+ F SL+ G C + A F + G P++ T N +
Sbjct: 447 DSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVI 506
Query: 129 INGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENI 176
I+ R G ALNL EM + E ++A ELF M N+
Sbjct: 507 IDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNV 566
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
P VV Y+++I GF ++ +A L M+ GV P++V + ++++ LC +M EA
Sbjct: 567 LPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYN 626
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
L M + G+ P+ Y +++ GFC G + +A LF M G TV +Y+ L++GYC
Sbjct: 627 LFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYC 686
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K I+ A L EM KGI PDVV YN L +++A ++ +EM+ +GV D
Sbjct: 687 KMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHM 746
Query: 357 TY 358
TY
Sbjct: 747 TY 748
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 166/384 (43%), Gaps = 56/384 (14%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S N L CLA+ + + SLF+ + STG P+++TY I++N +CK
Sbjct: 216 SCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCK-------------- 261
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRI--MEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
G E+ I +A + ++ G P V TY+T I GL R G
Sbjct: 262 -----------------GNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVG 304
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+ AL+ + S NG +V Y ++I G C +
Sbjct: 305 YVESALDFVRSLISANGLV-----------------------NVYCYNAIIHGLCKKGEL 341
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+EA +L EM G+ P+V T+++++ CK G +++ L++ M + P+ Y++L
Sbjct: 342 DEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSL 401
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
G C + + ++F + + G + +YSILI G+C +++ A L EM+ +
Sbjct: 402 FHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNL 461
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
PD + +L ++ A + F+ M G+ T ID C+ + EA+
Sbjct: 462 APDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALN 521
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
L ++ ++ YN +I+ L
Sbjct: 522 LMNEMQTQGIFPNLFTYNAVINRL 545
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 142/334 (42%), Gaps = 64/334 (19%)
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
+ + F LIK A S + A +F + + G E + + N L+ L +LF
Sbjct: 178 SVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLF 237
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN------DWNEA 199
EEM S P+V TYT ++ +C N D +A
Sbjct: 238 EEMKSTGPP-----------------------PNVFTYTIMMNFYCKGNFGEADIDTRQA 274
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
+L EM G P VVT++ + LC+ G ++ A + +I N + YN ++ G
Sbjct: 275 TEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHG 334
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
C G ++ A ++ M+S G + V++YSILI+G+CK ++E L L EM ++P
Sbjct: 335 LCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPS 394
Query: 320 VVIYNTLFVVL--------------------FEIHQ---------------VERAFKLFD 344
+V Y++LF L ++ Q ++ A KL +
Sbjct: 395 LVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLME 454
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
EM R+ +A D + + + G CK V A+E F
Sbjct: 455 EMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFF 488
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 6/251 (2%)
Query: 155 FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
F ++ A ++FLQ K + + +++ AN + L EM G PN
Sbjct: 189 FAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPN 248
Query: 215 VVTFNVIMDELCKN--GKMD----EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
V T+ ++M+ CK G+ D +A+ +L+ M + G P Y+T + G C G V
Sbjct: 249 VFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVES 308
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
A + S+ S V+ Y+ +I+G CK E++ AL + EM S GI PDV Y+ L
Sbjct: 309 ALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIH 368
Query: 329 VLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
+ VE+ L +EM+ + +Y + GLCK ++++FR L +
Sbjct: 369 GFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKY 428
Query: 389 DIRAYNCLIDG 399
D AY+ LI G
Sbjct: 429 DQTAYSILIKG 439
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 153/362 (42%), Gaps = 23/362 (6%)
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRILR----SCFTPNAVTFTSLIKGLCAESRIMEA 106
DL NI C ++GR + V+ R R +P V + K L E +
Sbjct: 55 DLVEINIQ-KCQLRVGRKRNEIRVMKRRSRIHRKHVLSPVVV---KVFKSLNWE--VARH 108
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKE 166
T ++ +G ++ + T++N L G + L ++ + ++ F E
Sbjct: 109 IKFSTTMKKYGFSRSIDAFRTVVNVLALAGMHMEVYALLRDIVCYYNKVNLDAF-----E 163
Query: 167 LF--LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
LF L ++ V+ + +I+ F + A + ++ G++ + + N ++
Sbjct: 164 LFPILLESPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKC 223
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG------RVNRAKELFVSMES 278
L + + + L + M G PN F Y +M+ +C +A E+ ME
Sbjct: 224 LAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMER 283
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
G + TV +YS I G C+ +E AL ++S +V YN + L + +++
Sbjct: 284 NGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDE 343
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A K+ +EM+ G++ D +TY I G CK + + + L ++ E + +Y+ L
Sbjct: 344 ALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFH 403
Query: 399 GL 400
GL
Sbjct: 404 GL 405
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 195/398 (48%), Gaps = 13/398 (3%)
Query: 13 SPPPVC-SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
+PPP S+N++ + + + +F + + P+ TYN +I+ K G + G
Sbjct: 195 APPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAG 254
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
F + +++ PNA+T+ L+ GLC R+ E +AL ++ P+ FTY+ L +G
Sbjct: 255 FRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDG 314
Query: 132 LYRTGHTIVALNLFEEMASGNGEFG------------VEGFVDKAKELFLQMKDENINPD 179
L R G + L+LF + G +G V A+E+ + + + P
Sbjct: 315 LSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPT 374
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
V Y ++I G+C + A +M + ++P+ +T+N +++ LCK ++ A LL
Sbjct: 375 RVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLM 434
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M GV P +NTL+D + TG++ + + M+ G V SY ++N +CKN
Sbjct: 435 EMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNG 494
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
+I A+++ +M K + P+ +YN + E ++AF L ++M+ +G++ TY
Sbjct: 495 KIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYN 554
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
I GLC S I EA E+ +L + D +YN LI
Sbjct: 555 LLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLI 592
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 180/367 (49%), Gaps = 23/367 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ILF L++N +LSLF + G+ YT +IL+N CK G+VS V
Sbjct: 303 PDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV 362
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ + P V + +LI G C + A + F +++ +P+ TYN LINGL +
Sbjct: 363 LQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCK 422
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ A++L ++M+D +NP V T+ ++I +
Sbjct: 423 AER-----------------------ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG 459
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ +L EM + G++PNVV++ I++ CKNGK+ EA +LD M V PNA VYN
Sbjct: 460 QLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYN 519
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
++D + G ++A L M+S G + ++ +Y++LI G C +I A + + +
Sbjct: 520 AIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNH 579
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
+ PD V YNTL +++A L M + G+ + TY I GL + E
Sbjct: 580 RLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEM 639
Query: 375 VELFRTL 381
L++ +
Sbjct: 640 EYLYQKM 646
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 171/381 (44%), Gaps = 14/381 (3%)
Query: 31 KHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR-SCFTPNAVT 89
+H D V F L S G PD + +N + G + +L R+ R PNA +
Sbjct: 144 RHAD-VRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 202
Query: 90 FTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
+ +I G+ R +A +F ++ PN TYNT+I+G + G L ++M
Sbjct: 203 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 262
Query: 150 SGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
+ G + + L +M + + PD TY+ + G D
Sbjct: 263 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 322
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
L + + GV T +++++ LCK+GK+ A +L ++ G+ P +YNTL+
Sbjct: 323 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 382
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
+G+C TG + A F M+S +Y+ LING CK + I A L EM G+
Sbjct: 383 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 442
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
P V +NTL Q+E+ F + EMQ +G+ + +Y + ++ CKN I EAV +
Sbjct: 443 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAI 502
Query: 378 FRTLRILKCELDIRAYNCLID 398
+ + + YN +ID
Sbjct: 503 LDDMFHKDVLPNAQVYNAIID 523
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 135/314 (42%), Gaps = 24/314 (7%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F F M R P ++N L L K + L + G+ P + T+N LI+
Sbjct: 395 FSTFGQM-KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLID 453
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+ + G++ F+VL + + PN V++ S++ C +I EA A+ + P
Sbjct: 454 AYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLP 513
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
N YN +I+ G D+A L +MK I+P +
Sbjct: 514 NAQVYNAIIDAYVEHGPN-----------------------DQAFILVEKMKSNGISPSI 550
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY +I+G C + +EA+ ++ + + + P+ V++N ++ C G +D+A L
Sbjct: 551 VTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQR 610
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M + G++ Y+ L+ G GR+N + L+ M + ++I++ Y K
Sbjct: 611 MHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGN 670
Query: 301 IEGALSLYGEMLSK 314
A L EML K
Sbjct: 671 EIKAEDLRKEMLQK 684
>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
Length = 894
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 190/406 (46%), Gaps = 14/406 (3%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ M+ P V ++ + L + + SL + GL P++ YN +I CK
Sbjct: 337 MEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRS 396
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
S VL +++ S F P+ VTF +LI C E + EA L + EPN +Y
Sbjct: 397 ASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTP 456
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGE-------------FGVEGFVDKAKELFLQMKDE 174
LI+G G +VA +L EM G G V G VD+A + +M +
Sbjct: 457 LIHGFCVRGEVMVASDLLVEMI-GRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAER 515
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
+ PD Y +I G C + AK LL+EM++Q VQP+ + ++D ++ K+ +A
Sbjct: 516 QVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDA 575
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
++ + M + G + YN ++ G+C +G +N A SM +GC F+Y+ LI+G
Sbjct: 576 RKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDG 635
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
Y K +I+ AL +M+ + KP++V Y +L I + A LF MQ +G+ +
Sbjct: 636 YAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPN 695
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Y I L K ++A F + + C + + L++GL
Sbjct: 696 VVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGL 741
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 180/377 (47%), Gaps = 12/377 (3%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
+ + R P V +N + L K + L++ ++ ++ PD+ T+N LI FC+
Sbjct: 370 WEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCRE 429
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
G V +L +R PN +++T LI G C +M A+ L ++ G P+V T
Sbjct: 430 GDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTL 489
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGNG-------EFGVEGFVDK-----AKELFLQMKD 173
LI+GL +G AL + E+MA + G K AK L ++M +
Sbjct: 490 GALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLE 549
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
+ + PD YT++I GF ++ ++A+ + M ++G ++V +N ++ CK+G M+E
Sbjct: 550 QKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNE 609
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A + M ++G P+ F Y TL+DG+ G + A M C + +Y+ LI
Sbjct: 610 AVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLIC 669
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
GYC + A L+ M S+G+ P+VV Y L LF+ + +A F+ M + +
Sbjct: 670 GYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSP 729
Query: 354 DTWTYRTFIDGLCKNSY 370
+ T ++GL Y
Sbjct: 730 NDATMHYLVNGLTNCRY 746
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 175/365 (47%), Gaps = 12/365 (3%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G P YN+LI+ +C+ G V G ++LG + P VT+ ++I L +S + +
Sbjct: 306 GCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKI 365
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GE 154
+L +++ G PNV YNT+I L + AL + +M +
Sbjct: 366 ESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAA 425
Query: 155 FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
F EG V++A +L + + P+ ++YT +I GFC + A LL+EM+ +G P+
Sbjct: 426 FCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPD 485
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
VVT ++ L +G++DEA + + M + V P+A +YN L+ G C ++ AK L V
Sbjct: 486 VVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLV 545
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
M F Y+ LI+G+ ++ ++ A ++ M KG D+V YN + +
Sbjct: 546 EMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSG 605
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
+ A M++ G D +TY T IDG K I A+ + +C+ +I Y
Sbjct: 606 MMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYA 665
Query: 395 CLIDG 399
LI G
Sbjct: 666 SLICG 670
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 149/319 (46%), Gaps = 12/319 (3%)
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN 152
+++GLC E R+ E L GC P YN LI+G R G L L EM
Sbjct: 282 MVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKG 341
Query: 153 ------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
G + + K + L +MK+ ++P+V Y +VI C ++A
Sbjct: 342 IMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQAL 401
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
+L +M+ P+VVTFN ++ C+ G ++EA +LL I+ + PN Y L+ GF
Sbjct: 402 AVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGF 461
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
C+ G V A +L V M G T V + LI+G + +++ AL + +M + + PD
Sbjct: 462 CVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDA 521
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
IYN L L + + A L EM V D + Y T IDG ++ + +A ++F
Sbjct: 522 NIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEF 581
Query: 381 LRILKCELDIRAYNCLIDG 399
+ DI AYN +I G
Sbjct: 582 MEEKGGYRDIVAYNAMIKG 600
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 153/354 (43%), Gaps = 45/354 (12%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +N+L L K + +L + + PD + Y LI+ F + ++S +
Sbjct: 519 PDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKI 578
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + V + ++IKG C + EA + +R GC P+ FTY TLI+G +
Sbjct: 579 FEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAK 638
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G AL +M MK P++VTY S+I G+C
Sbjct: 639 KGDIKAALRFLCDM----------------------MK-RRCKPNIVTYASLICGYCNIG 675
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ + A+ L M +G+ PNVV + V++ L K K +A+ + M+ PN +
Sbjct: 676 NTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMH 735
Query: 255 TLMDGF--CLTGRVN-------RAK------ELFVSMESMGCTHTVFSYSILINGYCKNK 299
L++G C G +N +A ++F + S G + +Y+ +I C++
Sbjct: 736 YLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHN 795
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK----LFDEMQRD 349
+ A+ L +M +KG PD V T +L+ V ++ K L +E Q+D
Sbjct: 796 MLGKAMELKEKMSNKGCLPDPV---TFLSLLYGFSSVGKSGKWRSALPNEFQQD 846
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 2/206 (0%)
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFN--VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
W A+ L EM+ + + ++ V++ LC G+++E RL++ G P A Y
Sbjct: 255 WECARRLYGEMLARDREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFY 314
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N L+DG+C G V R L ME G TV +Y +I+ + ++ SL EM
Sbjct: 315 NVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKE 374
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+G+ P+V IYNT+ L + +A + ++M D T+ T I C+ + E
Sbjct: 375 RGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEE 434
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
A++L R + E + +Y LI G
Sbjct: 435 ALKLLREAIRRELEPNQLSYTPLIHG 460
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 100/239 (41%), Gaps = 2/239 (0%)
Query: 164 AKELFLQM--KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
A+ L+ +M +D D + ++RG C E + L+ +G P V +NV+
Sbjct: 258 ARRLYGEMLARDREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVL 317
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
+D C+ G + LL M G+ P Y ++ + + + L M+ G
Sbjct: 318 IDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGL 377
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
+ V Y+ +I CK + AL++ +M++ PDVV +NTL VE A K
Sbjct: 378 SPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALK 437
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
L E R + + +Y I G C ++ A +L + D+ LI GL
Sbjct: 438 LLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGL 496
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 201/399 (50%), Gaps = 12/399 (3%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P + ++N + K + + L + S G+ D+ TYN+LI+ C+ R++ G++
Sbjct: 225 APTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL 284
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L + + PN VT+ +LI G E +++ A+ L ++ FG PN T+N LI+G
Sbjct: 285 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 344
Query: 134 RTGHTIVALNLFEEMAS-----GNGEFGV--EGFV-----DKAKELFLQMKDENINPDVV 181
G+ AL +F M + +GV +G D A+ +++MK + +
Sbjct: 345 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 404
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT +I G C +EA LL EM G+ P++VT++ +++ CK G+ A ++ +
Sbjct: 405 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 464
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++G+ PN +Y+TL+ C G + A ++ +M G T F++++L+ CK ++
Sbjct: 465 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 524
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A M S GI P+ V ++ L + +AF +FDEM + G +TY +
Sbjct: 525 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 584
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ GLCK ++ EA + ++L + +D YN L+ +
Sbjct: 585 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 623
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 171/376 (45%), Gaps = 32/376 (8%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
S P V ++IL + L +F+ + G P +YT N ++ K G +
Sbjct: 121 SNPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
L +L+ P+ TF LI LCAE +++ L K+ G P + TYNT+++
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ G A+ EL MK + ++ DV TY +I C
Sbjct: 239 CKKGRFKAAI-----------------------ELLDHMKSKGVDADVCTYNMLIHDLCR 275
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
+N + LL +M + + PN VT+N +++ GK+ AS+LL+ M+ G+ PN
Sbjct: 276 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
+N L+DG G A ++F ME+ G T + SY +L++G CKN E + A Y M
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
G+ + Y + L + ++ A L +EM +DG+ D TY I+G CK
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCK----- 450
Query: 373 EAVELFRTLRILKCEL 388
V F+T + + C +
Sbjct: 451 --VGRFKTAKEIVCRI 464
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 168/346 (48%), Gaps = 13/346 (3%)
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
G+ S F L R C N + LI+ E I ++ +F + ++G P+V+T
Sbjct: 103 GKSSFVFGALMTTYRLC-NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTC 161
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGN-----GEFGV-------EGFVDKAKELFLQMKD 173
N ++ + ++G + + +EM F + EG +K+ L +M+
Sbjct: 162 NAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEK 221
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
P +VTY +V+ +C + A LL M +GV +V T+N+++ +LC++ ++ +
Sbjct: 222 SGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAK 281
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
LL M + + PN YNTL++GF G+V A +L M S G + +++ LI+
Sbjct: 282 GYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALID 341
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
G+ + AL ++ M +KG+ P V Y L L + + + A + M+R+GV
Sbjct: 342 GHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCV 401
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
TY IDGLCKN ++ EAV L + + DI Y+ LI+G
Sbjct: 402 GRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 447
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 167/379 (44%), Gaps = 19/379 (5%)
Query: 24 FGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCF 83
GCL + + +++ + G D +T+N+L+ CK G+V+ + +
Sbjct: 486 MGCLKE------AIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539
Query: 84 TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALN 143
PN V+F LI G ++A ++F ++ G P FTY +L+ GL + GH A
Sbjct: 540 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK 599
Query: 144 LFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
+ + + G + KA LF +M +I PD TYTS+I G C
Sbjct: 600 FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC 659
Query: 192 YANDWNEAKCLLIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
A E +G V PN V + +D + K G+ + M +G P+
Sbjct: 660 RKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDI 719
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
N ++DG+ G++ + +L M + + +Y+IL++GY K K++ + LY
Sbjct: 720 VTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRS 779
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
++ GI PD + ++L + + E + +E K+ GV D +T+ I C N
Sbjct: 780 IILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGE 839
Query: 371 IVEAVELFRTLRILKCELD 389
I A +L + + L LD
Sbjct: 840 INWAFDLVKVMTSLGISLD 858
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/449 (22%), Positives = 191/449 (42%), Gaps = 51/449 (11%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +FD M + P ++ L L K H K L++ D YN L+
Sbjct: 563 FSVFDEMTKV-GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 621
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CE 119
CK G ++ + G +++ P++ T+TSLI GLC + + + A + G
Sbjct: 622 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL 681
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEM-------------ASGNGEFGVEGFVDKAKE 166
PN Y ++G+++ G + E+M A +G + G ++K +
Sbjct: 682 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG-YSRMGKIEKTND 740
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
L +M ++N P++ TY ++ G+ D + + L ++ G+ P+ +T + ++ +C
Sbjct: 741 LLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGIC 800
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT---- 282
++ ++ ++L I GV + + +N L+ C G +N A +L M S+G +
Sbjct: 801 ESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKD 860
Query: 283 ----------------------HTVFSYSI---------LINGYCKNKEIEGALSLYGEM 311
H + I LING C+ +I+ A + EM
Sbjct: 861 TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 920
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
++ I P V + + L + + + A L M + + ++ T + CKN +
Sbjct: 921 IAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNV 980
Query: 372 VEAVELFRTLRILKCELDIRAYNCLIDGL 400
+EA+EL + +LD+ +YN LI GL
Sbjct: 981 IEALELRVVMSNCGLKLDLVSYNVLITGL 1009
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 163/367 (44%), Gaps = 15/367 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P SF+ L + S+F + G P +TY L+ CK G +
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + V + +L+ +C + +A +LF ++ P+ +TY +LI+GL R
Sbjct: 601 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 660
Query: 135 TGHTIVALNLFEEMASGNG-----EFGVEGFVD--------KAKELFL-QMKDENINPDV 180
G T++A+ LF + A G + FVD KA F QM + PD+
Sbjct: 661 KGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDI 719
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VT ++I G+ + LL EM +Q PN+ T+N+++ K + + L
Sbjct: 720 VTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRS 779
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+I G+ P+ ++L+ G C + + ++ + G +++++LI+ C N E
Sbjct: 780 IILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGE 839
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
I A L M S GI D + + VL H+ + + + EM + G++ ++ Y
Sbjct: 840 INWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIG 899
Query: 361 FIDGLCK 367
I+GLC+
Sbjct: 900 LINGLCR 906
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 156/355 (43%), Gaps = 25/355 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + N + ++ + L + + P+L TYNIL++ + K VS F++
Sbjct: 717 PDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL 776
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV-FGCEPNVFTYNTLINGLY 133
I+ + P+ +T SL+ G+C ES ++E K + G E + +T+N LI+
Sbjct: 777 YRSIILNGILPDKLTCHSLVLGIC-ESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCC 835
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVD----------------KAKELFLQMKDENIN 177
G A +L + M S G+ D +++ + +M + I+
Sbjct: 836 ANGEINWAFDLVKVMTS----LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGIS 891
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P+ Y +I G C D A + EM+ + P V + ++ L K GK DEA+ L
Sbjct: 892 PESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLL 951
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
L M+++ + P + TLM C G V A EL V M + G + SY++LI G C
Sbjct: 952 LRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCA 1011
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
++ A LY EM G + Y L L E AF D + +D +A
Sbjct: 1012 KGDMALAFELYEEMKGDGFLANATTYKALIRGLL---ARETAFSGADIILKDLLA 1063
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%)
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
N VY+ L+ + G + + E+F M G +V++ + ++ K+ E S
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
EML + I PDV +N L VL E++ L +M++ G A TY T + CK
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
A+EL ++ + D+ YN LI L
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDL 273
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ +ML M+ P + SF L KN + L L +++ GL DL +YN+LI
Sbjct: 951 LLRFMLKMKL-VPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1009
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 112
C G ++ F + + F NA T+ +LI+GL A A + K
Sbjct: 1010 CAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1059
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 185/384 (48%), Gaps = 18/384 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF-V 73
P + ++ L D L + + G+ + TY+ L++ CK R+ +
Sbjct: 182 PDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVAL 241
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+LG + R FTP+ VT++++I GLC R+ +A +F ++ C P TYN+LI G
Sbjct: 242 LLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYC 298
Query: 134 RTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
R G A+ L +M N F G +D A ELF QM ++PDVV
Sbjct: 299 RAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVV 358
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
T+TS++ G C +A LL E+ +G P + T+N ++D CK+ ++ +A L+
Sbjct: 359 TFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADF 418
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG--CTHTVFSYSILINGYCKNK 299
G PN YN L+ G C GR ++A + + S G C +V Y+I+++ C++
Sbjct: 419 RSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDG 478
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
+ A+ Y EM+ +G P + T+ L + HQ ++A +L +EM + G T
Sbjct: 479 RTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCD 538
Query: 360 TFIDGLCKNSYIVEAVELFRTLRI 383
+ C+ I +A EL LR+
Sbjct: 539 AVVSAYCRAGMIQKADELASELRL 562
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 181/371 (48%), Gaps = 29/371 (7%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP ++ L L+K + + + + S PD T +++ C RV
Sbjct: 146 PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARE 205
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF-TKLRVFGCEPNVFTYNTLINGL 132
++ +L NA+T+++L+ GLC R+ EA AL ++ G P++ TY+T+I+GL
Sbjct: 206 LVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGL 265
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ G A+++FEEM+ P +TY S+I G+C
Sbjct: 266 CKAGRLRDAVDIFEEMSCA--------------------------PTAITYNSLIGGYCR 299
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
A D +EA LL +M+D P+V+T+ +M CK G++D+A L M+ + P+
Sbjct: 300 AGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVT 359
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
+ +L+DG C GR+ A EL + GC T+++Y+ +++GYCK+ ++ A L +
Sbjct: 360 FTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFR 419
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT--YRTFIDGLCKNSY 370
S+G P+ V YN L + ++A + D++ +G T Y +D LC++
Sbjct: 420 SRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGR 479
Query: 371 IVEAVELFRTL 381
+AV+ + +
Sbjct: 480 TDDAVQFYEEM 490
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 196/398 (49%), Gaps = 30/398 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D + + SP PV N + L + T ++LF ++ G YN LI+
Sbjct: 33 LLDEIRDRGLSPDPV-ELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYN-LIHPL 90
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK + +L + P + +I GLC R+ A ++ ++ P+
Sbjct: 91 CKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMN-DAHPPDF 149
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TY L++GL + G A+ + +EM S A+ + PD T
Sbjct: 150 LTYTKLVHGLSKAGRLRDAVQVLQEMVS-------------ARHV----------PDNTT 186
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA-SRLLDLM 241
T V++ C + ++A+ L+ EM+ +G+ N +T++ ++D LCK ++DEA + LL +
Sbjct: 187 LTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEV 246
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G P+ Y+T++DG C GR+ A ++F E M C T +Y+ LI GYC+ ++
Sbjct: 247 TRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIF---EEMSCAPTAITYNSLIGGYCRAGDM 303
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A+ L G+M+ PDV+ Y TL ++ +++ A++LF +M + ++ D T+ +
Sbjct: 304 DEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSL 363
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+DGLC + +A+EL + C I YNC++DG
Sbjct: 364 VDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDG 401
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 70/179 (39%), Gaps = 14/179 (7%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R PP + ++N + K+ L S G P+ TYNIL+ C+ GR
Sbjct: 383 ITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGR 442
Query: 68 VSHGFVVLGRI-LRSCFTPNAVTFTSLI-KGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
L ++ P +V ++I LC + R +A + ++ G P T+
Sbjct: 443 TDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATF 502
Query: 126 NTLINGLYRTGHTIVALNLFEEM-----ASGNG-------EFGVEGFVDKAKELFLQMK 172
T++ L + A L EEM G G + G + KA EL +++
Sbjct: 503 ATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 561
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/105 (20%), Positives = 45/105 (42%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P P V + I+ L ++ D + ++ + G P T+ ++ CK +
Sbjct: 459 PCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQA 518
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF 116
+L +++ TP T +++ C I +A L ++LR++
Sbjct: 519 HELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRLY 563
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 201/399 (50%), Gaps = 12/399 (3%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P + ++N + K + + L + S G+ D+ TYN+LI+ C+ R++ G++
Sbjct: 265 APTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL 324
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L + + PN VT+ +LI G E +++ A+ L ++ FG PN T+N LI+G
Sbjct: 325 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 384
Query: 134 RTGHTIVALNLFEEMAS-----GNGEFGV--EGF-----VDKAKELFLQMKDENINPDVV 181
G+ AL +F M + +GV +G D A+ +++MK + +
Sbjct: 385 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 444
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT +I G C +EA LL EM G+ P++VT++ +++ CK G+ A ++ +
Sbjct: 445 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 504
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++G+ PN +Y+TL+ C G + A ++ +M G T F++++L+ CK ++
Sbjct: 505 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 564
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A M S GI P+ V ++ L + +AF +FDEM + G +TY +
Sbjct: 565 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 624
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ GLCK ++ EA + ++L + +D YN L+ +
Sbjct: 625 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 663
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 171/376 (45%), Gaps = 32/376 (8%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
S P V ++IL + L +F+ + G P +YT N ++ K G +
Sbjct: 161 SNPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 218
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
L +L+ P+ TF LI LCAE +++ L K+ G P + TYNT+++
Sbjct: 219 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 278
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ G A+ EL MK + ++ DV TY +I C
Sbjct: 279 CKKGRFKAAI-----------------------ELLDHMKSKGVDADVCTYNMLIHDLCR 315
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
+N + LL +M + + PN VT+N +++ GK+ AS+LL+ M+ G+ PN
Sbjct: 316 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 375
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
+N L+DG G A ++F ME+ G T + SY +L++G CKN E + A Y M
Sbjct: 376 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 435
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
G+ + Y + L + ++ A L +EM +DG+ D TY I+G CK
Sbjct: 436 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCK----- 490
Query: 373 EAVELFRTLRILKCEL 388
V F+T + + C +
Sbjct: 491 --VGRFKTAKEIVCRI 504
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 168/346 (48%), Gaps = 13/346 (3%)
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
G+ S F L R C N + LI+ E I ++ +F + ++G P+V+T
Sbjct: 143 GKSSFVFGALMTTYRLC-NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTC 201
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGN-----GEFGV-------EGFVDKAKELFLQMKD 173
N ++ + ++G + + +EM F + EG +K+ L +M+
Sbjct: 202 NAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEK 261
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
P +VTY +V+ +C + A LL M +GV +V T+N+++ +LC++ ++ +
Sbjct: 262 SGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAK 321
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
LL M + + PN YNTL++GF G+V A +L M S G + +++ LI+
Sbjct: 322 GYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALID 381
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
G+ + AL ++ M +KG+ P V Y L L + + + A + M+R+GV
Sbjct: 382 GHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCV 441
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
TY IDGLCKN ++ EAV L + + DI Y+ LI+G
Sbjct: 442 GRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 487
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 167/379 (44%), Gaps = 19/379 (5%)
Query: 24 FGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCF 83
GCL + + +++ + G D +T+N+L+ CK G+V+ + +
Sbjct: 526 MGCLKE------AIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 579
Query: 84 TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALN 143
PN V+F LI G ++A ++F ++ G P FTY +L+ GL + GH A
Sbjct: 580 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK 639
Query: 144 LFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
+ + + G + KA LF +M +I PD TYTS+I G C
Sbjct: 640 FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC 699
Query: 192 YANDWNEAKCLLIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
A E +G V PN V + +D + K G+ + M +G P+
Sbjct: 700 RKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDI 759
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
N ++DG+ G++ + +L M + + +Y+IL++GY K K++ + LY
Sbjct: 760 VTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRS 819
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
++ GI PD + ++L + + E + +E K+ GV D +T+ I C N
Sbjct: 820 IILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGE 879
Query: 371 IVEAVELFRTLRILKCELD 389
I A +L + + L LD
Sbjct: 880 INWAFDLVKVMTSLGISLD 898
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/449 (22%), Positives = 191/449 (42%), Gaps = 51/449 (11%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +FD M + P ++ L L K H K L++ D YN L+
Sbjct: 603 FSVFDEMTKV-GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 661
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CE 119
CK G ++ + G +++ P++ T+TSLI GLC + + + A + G
Sbjct: 662 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL 721
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEM-------------ASGNGEFGVEGFVDKAKE 166
PN Y ++G+++ G + E+M A +G + G ++K +
Sbjct: 722 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG-YSRMGKIEKTND 780
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
L +M ++N P++ TY ++ G+ D + + L ++ G+ P+ +T + ++ +C
Sbjct: 781 LLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGIC 840
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT---- 282
++ ++ ++L I GV + + +N L+ C G +N A +L M S+G +
Sbjct: 841 ESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKD 900
Query: 283 ----------------------HTVFSYSI---------LINGYCKNKEIEGALSLYGEM 311
H + I LING C+ +I+ A + EM
Sbjct: 901 TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 960
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
++ I P V + + L + + + A L M + + ++ T + CKN +
Sbjct: 961 IAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNV 1020
Query: 372 VEAVELFRTLRILKCELDIRAYNCLIDGL 400
+EA+EL + +LD+ +YN LI GL
Sbjct: 1021 IEALELRVVMSNCGLKLDLVSYNVLITGL 1049
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 163/367 (44%), Gaps = 15/367 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P SF+ L + S+F + G P +TY L+ CK G +
Sbjct: 581 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 640
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + V + +L+ +C + +A +LF ++ P+ +TY +LI+GL R
Sbjct: 641 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 700
Query: 135 TGHTIVALNLFEEMASGNG-----EFGVEGFVD--------KAKELFL-QMKDENINPDV 180
G T++A+ LF + A G + FVD KA F QM + PD+
Sbjct: 701 KGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDI 759
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VT ++I G+ + LL EM +Q PN+ T+N+++ K + + L
Sbjct: 760 VTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRS 819
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+I G+ P+ ++L+ G C + + ++ + G +++++LI+ C N E
Sbjct: 820 IILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGE 879
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
I A L M S GI D + + VL H+ + + + EM + G++ ++ Y
Sbjct: 880 INWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIG 939
Query: 361 FIDGLCK 367
I+GLC+
Sbjct: 940 LINGLCR 946
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 156/355 (43%), Gaps = 25/355 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + N + ++ + L + + P+L TYNIL++ + K VS F++
Sbjct: 757 PDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL 816
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV-FGCEPNVFTYNTLINGLY 133
I+ + P+ +T SL+ G+C ES ++E K + G E + +T+N LI+
Sbjct: 817 YRSIILNGILPDKLTCHSLVLGIC-ESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCC 875
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVD----------------KAKELFLQMKDENIN 177
G A +L + M S G+ D +++ + +M + I+
Sbjct: 876 ANGEINWAFDLVKVMTS----LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGIS 931
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P+ Y +I G C D A + EM+ + P V + ++ L K GK DEA+ L
Sbjct: 932 PESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLL 991
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
L M+++ + P + TLM C G V A EL V M + G + SY++LI G C
Sbjct: 992 LRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCA 1051
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
++ A LY EM G + Y L L E AF D + +D +A
Sbjct: 1052 KGDMALAFELYEEMKGDGFLANATTYKALIRGLL---ARETAFSGADIILKDLLA 1103
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%)
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
N VY+ L+ + G + + E+F M G +V++ + ++ K+ E S
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
EML + I PDV +N L VL E++ L +M++ G A TY T + CK
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
A+EL ++ + D+ YN LI L
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDL 313
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ +ML M+ P + SF L KN + L L +++ GL DL +YN+LI
Sbjct: 991 LLRFMLKMKL-VPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1049
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 112
C G ++ F + + F NA T+ +LI+GL A A + K
Sbjct: 1050 CAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1099
>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 472
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 187/370 (50%), Gaps = 14/370 (3%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
D + +F+ ++ D YTY+ L++ C GR+ +L + PN V F L
Sbjct: 17 DQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVL 76
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG-- 151
I LC + + A+ L + + GC PN TYN+L++GL G A++L M +
Sbjct: 77 ISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKC 136
Query: 152 ---NGEFG--VEGFVDKAKEL-----FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
+ FG V+GFV + L + ++++ + +Y+S+I G
Sbjct: 137 VPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQ 196
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
L EM+++G +PN + ++ ++D LC+ GK DEA L M G PN+F Y++LM G+
Sbjct: 197 LWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYF 256
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
G +++A ++ M C H YSILING CKN +++ AL ++ +MLS+GIK DVV
Sbjct: 257 EAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVV 316
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEM--QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
Y+++ VE+ KLF++M + D TY ++ C + + A+++
Sbjct: 317 AYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILN 376
Query: 380 TLRILKCELD 389
T+ C+ D
Sbjct: 377 TMLDQGCDPD 386
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 176/365 (48%), Gaps = 16/365 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+++ L L D +SL + G FP+ +N+LI+ CK G +S ++ +
Sbjct: 37 TYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNM 96
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PN VT+ SL+ GLC + ++ +A +L ++ C PN T+ TL++G + G
Sbjct: 97 FLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRA 156
Query: 139 I----VALNLFEEMASGNGEFGV---------EGFVDKAKELFLQMKDENINPDVVTYTS 185
+ V ++L E+ GN EF EG + +L+ +M ++ P+ + Y++
Sbjct: 157 LDGVRVLVSLEEKGYRGN-EFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSA 215
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I G C +EAK LIEM ++G PN T++ +M + G + +A + M
Sbjct: 216 LIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDND 275
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
+ Y+ L++G C G++ A ++ M S G V +YS +I+G+C + +E +
Sbjct: 276 CNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGM 335
Query: 306 SLYGEML--SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
L+ +ML + ++PDVV YN L + V RA + + M G D T F+
Sbjct: 336 KLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLK 395
Query: 364 GLCKN 368
L N
Sbjct: 396 TLRDN 400
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 159/322 (49%), Gaps = 15/322 (4%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P PV +FN+L L K L + G P+ TYN L++ C G++
Sbjct: 68 PNPV-AFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMS 126
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L R++ + PN +TF +L+ G R ++ + L G N F+Y++LI+GL+
Sbjct: 127 LLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLF 186
Query: 134 RTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVV 181
+ G + L++EM + EG D+AKE ++MK++ P+
Sbjct: 187 KEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSF 246
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY+S++ G+ A D ++A + EM D + V ++++++ LCKNGK+ EA + M
Sbjct: 247 TYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQM 306
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM--ESMGCTHTVFSYSILINGYCKNK 299
+ G++ + Y++++ GFC V + +LF M + V +Y+IL+N +C
Sbjct: 307 LSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKN 366
Query: 300 EIEGALSLYGEMLSKGIKPDVV 321
+ A+ + ML +G PD +
Sbjct: 367 SVSRAIDILNTMLDQGCDPDFI 388
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 139/311 (44%), Gaps = 70/311 (22%)
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
G VD+A E+F M D N D TY++++ G C +EA LL EM +G PN V F
Sbjct: 14 GNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAF 73
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF----- 273
NV++ LCK G + AS+L+D M G PN YN+L+ G CL G++++A L
Sbjct: 74 NVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVA 133
Query: 274 ------------------------------VSMESMGCTHTVFSYSILINGYCKNKEIEG 303
VS+E G FSYS LI+G K + E
Sbjct: 134 NKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEH 193
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT--- 360
+ L+ EM+ KG KP+ ++Y+ L L + + A + EM+ G +++TY +
Sbjct: 194 GMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMW 253
Query: 361 --------------------------------FIDGLCKNSYIVEAVELFRTLRILKCEL 388
I+GLCKN + EA+ +++ + +L
Sbjct: 254 GYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKL 313
Query: 389 DIRAYNCLIDG 399
D+ AY+ +I G
Sbjct: 314 DVVAYSSMIHG 324
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 168/336 (50%), Gaps = 12/336 (3%)
Query: 40 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
F + GL D TY LIN C+ G + VL +L + VT+T L+ G C
Sbjct: 387 FDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCK 446
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV-- 157
++ EA + + G PNV TY L +GL + G A L EM++ E
Sbjct: 447 RGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACT 506
Query: 158 ----------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
G++D+A M + PDV TYT++I C + + + A LL EM+
Sbjct: 507 YNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEML 566
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
D G++P +VT+NV+M+ C +G+++ +LL+ M++ + PNA YN+LM +C+ +
Sbjct: 567 DNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMK 626
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
E++ M S +Y+ILI G+CK + ++ A + EM+ KG + Y+ L
Sbjct: 627 STTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALI 686
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
+L + + A KLF +M+++G A+ Y +ID
Sbjct: 687 RLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYID 722
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 190/395 (48%), Gaps = 15/395 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
VCS+NIL L + LF + S PD+ TY ILI+ +C +G + + +L
Sbjct: 262 VCSYNILLKVLCGAGRVEDARQLFDEMASP---PDVVTYGILIHGYCALGELENAVKLLD 318
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ PNA +TS++ LC + R+ +A + + + Y T+++G G
Sbjct: 319 DMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKG 378
Query: 137 HTIVALNLFEEMA-SGNGEFGV-----------EGFVDKAKELFLQMKDENINPDVVTYT 184
+ A F+EM G GV G + +A+++ +M ++ D VTYT
Sbjct: 379 DLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYT 438
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
++ G+C EA + M+ +GV PNVVT+ + D LCK G + A+ LL M
Sbjct: 439 VLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNK 498
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G+ NA YN+L++G C G +++A M++ G V++Y+ LI+ CK+ E++ A
Sbjct: 499 GLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRA 558
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L EML GIKP +V YN L +VE KL + M + + TY + +
Sbjct: 559 HDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQ 618
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
C + + E+++ + E + YN LI G
Sbjct: 619 YCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKG 653
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 195/408 (47%), Gaps = 18/408 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M SPP V ++ IL + + L + + G+ P+ Y ++
Sbjct: 284 LFDEMA----SPPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALL 339
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C GRVS V+ ++ + +T+++ G C + ++ A F +++ G +
Sbjct: 340 CDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDG 399
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG-------VEGFVDKAK-----ELFLQ 170
TY TLINGL R G A + +EM + + V+G+ + K ++
Sbjct: 400 VTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNT 459
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + P+VVTYT++ G C D A LL EM ++G++ N T+N +++ LCK G
Sbjct: 460 MVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGY 519
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+D+A R + M G++P+ + Y TL+D C +G ++RA +L M G T+ +Y++
Sbjct: 520 LDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNV 579
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L+NG+C + +EG L ML K I P+ YN+L + ++ +++ M
Sbjct: 580 LMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRN 639
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC-ELDIRAYNCLI 397
V + TY I G CK + EA + F I K L +Y+ LI
Sbjct: 640 VEPNENTYNILIKGHCKARSMKEA-QYFHNEMIEKGFRLTASSYSALI 686
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 142/308 (46%), Gaps = 12/308 (3%)
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 110
D TY +L++ +CK G+++ F V +++ PN VT+T+L GLC + + A L
Sbjct: 433 DEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELL 492
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------E 158
++ G E N TYN+LINGL + G+ A+ +M + + V
Sbjct: 493 HEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKS 552
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
G +D+A +L +M D I P +VTY ++ GFC + K LL M+++ + PN T+
Sbjct: 553 GELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTY 612
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
N +M + C M + + M V PN YN L+ G C + A+ M
Sbjct: 613 NSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIE 672
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
G T SYS LI K K+ A L+ +M +G + +YN F +E
Sbjct: 673 KGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEA 732
Query: 339 AFKLFDEM 346
L DE+
Sbjct: 733 TLALCDEL 740
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 161/327 (49%), Gaps = 22/327 (6%)
Query: 82 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVA 141
F+ + +F L+ LC + +A L ++R +G P+ N +++ L A
Sbjct: 202 AFSSDPASFDLLL--LC-----LPSAPLLRRVRQYGISPSPEACNAVLSRLPLDE----A 250
Query: 142 LNLFEEMASGNG-EFGV-------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ LF+ + N + + G V+ A++LF +M PDVVTY +I G+C
Sbjct: 251 IELFQGLPDKNVCSYNILLKVLCGAGRVEDARQLFDEMASP---PDVVTYGILIHGYCAL 307
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+ A LL +M+ +GV+PN + ++ LC G++ +A +++ M+ V + VY
Sbjct: 308 GELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVY 367
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
T++ GFC G + A+ F M+ G +Y+ LING C+ E++ A + EML+
Sbjct: 368 TTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLA 427
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+ + D V Y L + ++ AF++ + M + GVA + TY DGLCK +
Sbjct: 428 RRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQA 487
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A EL + EL+ YN LI+GL
Sbjct: 488 ANELLHEMSNKGLELNACTYNSLINGL 514
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 164/383 (42%), Gaps = 41/383 (10%)
Query: 18 CSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGR 77
SF++L CL L +R+ G+ P C + R+ +
Sbjct: 208 ASFDLLLLCLPS-------APLLRRVRQYGISPSPEA------CNAVLSRLPLDEAI--E 252
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
+ + N ++ L+K LC R+ +A LF ++ P+V TY LI+G
Sbjct: 253 LFQGLPDKNVCSYNILLKVLCGAGRVEDARQLFDEM---ASPPDVVTYGILIHG------ 303
Query: 138 TIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
+ G ++ A +L M + P+ YTSV+ C +
Sbjct: 304 -----------------YCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVS 346
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
+A ++ +M+ V + + ++ C G + A R D M + G+ + Y TL+
Sbjct: 347 DALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLI 406
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
+G C G + A+++ M + +Y++L++GYCK ++ A ++ M+ +G+
Sbjct: 407 NGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVA 466
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
P+VV Y L L + V+ A +L EM G+ + TY + I+GLCK Y+ +A+
Sbjct: 467 PNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRT 526
Query: 378 FRTLRILKCELDIRAYNCLIDGL 400
+ + D+ Y LID L
Sbjct: 527 MADMDAAGLKPDVYTYTTLIDAL 549
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 2/113 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L + + ++K + S + P+ TYNILI CK +
Sbjct: 607 PNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYF 666
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV--FGCEPNVFTY 125
++ F A ++++LI+ L + + +EA LF +R F EP+V+ +
Sbjct: 667 HNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNF 719
>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
Length = 695
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 190/403 (47%), Gaps = 17/403 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +FN+L L + + LF+ +NS G PD+ TYN +I CK ++ +
Sbjct: 112 PDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFL 171
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R+ + +P VT+T+LI LC +R+ +A +F K+ C Y+ L N L R
Sbjct: 172 LERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQR 231
Query: 135 TGHTIVALNLFEEMASGN-------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
G + A ++ +M N G ++G +A +L +M + I PD
Sbjct: 232 AGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFY 291
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y+ +I G C A EAK + EM +G+ P VVT+N +++ L K+ +A L M
Sbjct: 292 AYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFM 351
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G P+ YN ++ GFC G N A LF M G ++Y+ +I G+ K++
Sbjct: 352 LDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAW 411
Query: 302 EGALSLYGEMLS----KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
A L+ M S K P++ Y L L + QVE AFKL M+ G
Sbjct: 412 SSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKI 471
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + L + + +A EL++ + + C+ + + N L+DG+
Sbjct: 472 WEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGI 514
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 172/360 (47%), Gaps = 31/360 (8%)
Query: 45 STGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 104
GLFP+ YN LI+C CK G ++ L R+ + C PN V++ +I G C I
Sbjct: 3 EAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQHC-APNVVSYNIIIDGYCKARNIE 61
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKA 164
+A A ++ G P Y++++ +TG+ A+++F EM + E
Sbjct: 62 KALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCE---------- 111
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
PD+V + ++ G A +EA+ L M +G +P+VVT+N ++
Sbjct: 112 -------------PDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAG 158
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
LCK K+DEA LL+ M Q V P Y TL+D C R+ +A E+F M C T
Sbjct: 159 LCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACT 218
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE----RAF 340
+YS+L N + ++ A +Y +M K + + NT +V+ + +++ A
Sbjct: 219 EPAYSVLFNKLQRAGKLVEASRVYSDMCRKNV---CMTDNTYSLVVLGLSKMDGGNVEAA 275
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
KL EM +A D + Y I+GLCK EA E+F+ +R + YN L++GL
Sbjct: 276 KLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGL 335
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 183/420 (43%), Gaps = 52/420 (12%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+NI+ K ++ + L+ + + G P + Y+ ++ FCK G VS V
Sbjct: 42 PNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDV 101
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL-- 132
+ P+ V F L+ GL +I EA LF + GC+P+V TYNT+I GL
Sbjct: 102 FAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCK 161
Query: 133 ----------------------YRTGHTIV-----------ALNLFEEMASGN------- 152
+ T T++ A +FE+MA G
Sbjct: 162 WKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPA 221
Query: 153 -----GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN-EAKCLLIEM 206
+ G + +A ++ M +N+ TY+ V+ G + N EA L+ EM
Sbjct: 222 YSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEM 281
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
M + + P+ ++++++ LCK + EA + M G+ P YNTL++G T ++
Sbjct: 282 MGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKL 341
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
A EL M G SY+++I G+C N + A L+ +M+ GI + YN +
Sbjct: 342 QDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFM 401
Query: 327 FVVLFEIHQVERAFKLFDEMQR---DGV-AADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
V + A+ LF MQ D V A + +TY I LCK + EA +L +R
Sbjct: 402 IVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMR 461
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 161/385 (41%), Gaps = 65/385 (16%)
Query: 54 TYNILINCFCKM--GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 111
TY++++ KM G V +V ++ P+ ++ LI GLC R EA +F
Sbjct: 256 TYSLVVLGLSKMDGGNVEAAKLVT-EMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQ 314
Query: 112 KLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQM 171
++R G P V TYNTL+ GL T + A EL M
Sbjct: 315 EMRGRGISPTVVTYNTLLEGLLSTAK-----------------------LQDAMELTYFM 351
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV-------------------- 211
D+ PD +Y +IRGFC D NEA CL +M+ G+
Sbjct: 352 LDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAW 411
Query: 212 -------------------QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
PN+ T+ +++ LCK +++EA +LL M G P+ +
Sbjct: 412 SSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKI 471
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
+ L+ GR++ A EL+ M + C V S +IL++G + ++ A +M
Sbjct: 472 WEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMT 531
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
GI PD Y+ L V L + ++A KL +E+ RDG + R + LC
Sbjct: 532 DTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLLGALCAQGDFQ 591
Query: 373 EAVELFRTLRILKCELDIRAYNCLI 397
A E + L + E+ + +N L+
Sbjct: 592 GAYEFYCWLPSVGVEVTLGMHNTLV 616
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 128/230 (55%), Gaps = 1/230 (0%)
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + + P+ + Y ++I C A EA+ L + M Q PNVV++N+I+D CK
Sbjct: 1 MLEAGLFPNAILYNNLISCLCKAGMLAEAESYL-KRMPQHCAPNVVSYNIIIDGYCKARN 59
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+++A L M ++G P Y++++ FC TG V++A ++F M + GC + ++++
Sbjct: 60 IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 119
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L++G + ++I A L+ M S+G KPDVV YNT+ L + +++ A L + M+++
Sbjct: 120 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 179
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
V+ TY T ID LCK + + +A E+F + C AY+ L + L
Sbjct: 180 VSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKL 229
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 140/326 (42%), Gaps = 24/326 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L + L + G PD +YN++I FC G + + +
Sbjct: 323 PTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCL 382
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE----PNVFTYNTLIN 130
+++ N T+ +I G + A LF +++ + PN+FTY LI+
Sbjct: 383 FQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILIS 442
Query: 131 GLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINP 178
L +T A L M G +D A EL+ +M N
Sbjct: 443 SLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQ 502
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
V + ++ G +EAK L +M D G+ P+ T++ ++ LC GK D+A +L+
Sbjct: 503 LVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLV 562
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
+ +++ G RP L+ C G A E + + S+G T+ ++ L+ C
Sbjct: 563 EELVRDGKRPENQGLRQLLGALCAQGDFQGAYEFYCWLPSVGVEVTLGMHNTLVTSCCLA 622
Query: 299 KEIEGALSLYGEMLSK--GIKPDVVI 322
++++ Y +M+ + G+ PDV++
Sbjct: 623 RKLD-----YLDMIEQREGV-PDVIV 642
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 200/396 (50%), Gaps = 16/396 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+F +L L + + V+ LF L S G+ TY ++++ C G + ++ R
Sbjct: 21 AFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELV-RE 79
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
L +TP + +I GLC SR+M+A + K+ PNVFTY L+NGL R+ T
Sbjct: 80 LSGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKT 139
Query: 139 IVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
+A +F+EM NG G +D+A + ++ + + DV+T T+
Sbjct: 140 KLAREVFQEMKR-NGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTT 198
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DLMIQI 244
++ G C A+ ++A + EM GV+PN VT++ ++ ++G++D R + +
Sbjct: 199 IVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARK 258
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G A Y +D C G ++RA++ + G V +YS+LIN + + + + +
Sbjct: 259 GGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDAS 318
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L L +M G+KPDVV Y+TL VL + + + AF+L + M+ G + TY + +DG
Sbjct: 319 LELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDG 378
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LCK+ + E ++ + +C D+ Y+ +++GL
Sbjct: 379 LCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGL 414
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 172/347 (49%), Gaps = 15/347 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ IL L ++ +F+ + G P+ TY LI + G + V
Sbjct: 121 PNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRV 180
Query: 75 LGRILRSCFTP-NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ RS P + +T T+++ GLC SR+ +A ++R G PN TY+ L++G
Sbjct: 181 MIE-QRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFR 239
Query: 134 RTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDV 180
+ G + FEE + G G++D+A++ +++ + PDV
Sbjct: 240 QHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDV 299
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY+ +I F A ++ + LL +M GV+P+VVT++ +++ LCK K +A RLL+L
Sbjct: 300 VTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLEL 359
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M G PN YN++MDG C +G+++ ++ M C+ V +YSI++NG K
Sbjct: 360 MEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGM 419
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
++ A+ L+ + S PD Y+ + L ++E A ++ M+
Sbjct: 420 LDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGME 466
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 1/202 (0%)
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
AK L +++ G + + F ++ +L + K E RL L+ GV Y ++D
Sbjct: 3 AKLLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVD 62
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G C G N+A EL + + T TVF Y+ +I G C+ + A + +M+ + I P
Sbjct: 63 GLCGAGMANQALELVRELSGV-YTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVP 121
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
+V Y L L ++ + A ++F EM+R+G + TY T I L + I EA+ +
Sbjct: 122 NVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVM 181
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
R L+ D+ ++ GL
Sbjct: 182 IEQRSLELPTDVITCTTIVGGL 203
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 73/171 (42%), Gaps = 4/171 (2%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
SPP V ++N + L K+ D V +++ + + PD+ TY+I++N K G +
Sbjct: 365 SPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAV 424
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV-FTYNTLING 131
+ I S P+A ++ +I LC ++ EA ++ + V N+ L+
Sbjct: 425 KLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDNICRALAGLVAA 484
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAK---ELFLQMKDENINPD 179
L T A + E G D AK + L+ K+E+ + +
Sbjct: 485 LCDAKRTDSARRIVEVARERGHRVTKSGDTDLAKIVEDHLLESKEEHADAE 535
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 184/393 (46%), Gaps = 12/393 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S+ L + + D L LF +++ +P + TY ++I C++GR + + +
Sbjct: 276 SYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEM 335
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PN T+T LI LC +S +A + + G P+V TYN LI+G + G +
Sbjct: 336 TEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLS 395
Query: 139 IVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSV 186
AL + M S N + + KA L +M + + P+VVTY +
Sbjct: 396 ASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNIL 455
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G C D A LL M + G+ P+ T++V +D LCK G ++EA L + + + G+
Sbjct: 456 IHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGI 515
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+ N +Y+TL+DG+C G+V+ + L M S GC +Y+ LI+GYCK K + A
Sbjct: 516 KANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARL 575
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L M+ + I+P Y L L + + ++A +FD+M G D + Y FI C
Sbjct: 576 LVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYC 635
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + +A L + D Y ID
Sbjct: 636 SHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDA 668
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 192/392 (48%), Gaps = 12/392 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+N+L L++ D + S++ + + P+++T N ++N +CK+G V + + +I+
Sbjct: 172 YNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIV 231
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
++ + + T+TSLI G C + A A+F + GC N +Y LI+G
Sbjct: 232 QAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVD 291
Query: 140 VALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKDENINPDVVTYTSVI 187
AL LF +M N V G +A +F +M +++ P+V TYT +I
Sbjct: 292 EALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLI 351
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
C +++++AK +L M+++G+ P+VVT+N ++D CK G A +L LM
Sbjct: 352 CSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCS 411
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
PNA YN L+ GFC +++A L M V +Y+ILI+G CK ++ A L
Sbjct: 412 PNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKL 471
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
M G+ PD Y+ L + VE A LF+ ++ G+ A+ Y T IDG CK
Sbjct: 472 LSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCK 531
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + L + C + YN LIDG
Sbjct: 532 VGKVSDGRFLLDKMLSAGCVPNSITYNSLIDG 563
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 182/387 (47%), Gaps = 25/387 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ +L L ++ ++D + + GL P + TYN LI+ +CK G + +
Sbjct: 342 PNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEI 401
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + +PNA T+ LI G C I +A +L K+ +PNV TYN LI+G +
Sbjct: 402 LSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCK 461
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
EG + A +L M + + PD TY+ I C
Sbjct: 462 -----------------------EGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRG 498
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EA+ L + ++G++ N V ++ ++D CK GK+ + LLD M+ G PN+ YN
Sbjct: 499 LVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYN 558
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L+DG+C A+ L M +Y+ILI+ K+ E + A ++ +MLS
Sbjct: 559 SLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLST 618
Query: 315 GIKPDVVIYNTLFVVLFEIH-QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
G PDV IY T F+ + H +++ A L +M G+ DT Y FID + I
Sbjct: 619 GSHPDVFIY-TAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDG 677
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A + + + + CE Y+CLI L
Sbjct: 678 AFGILKRMHEVGCEPSYYTYSCLIKHL 704
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 182/397 (45%), Gaps = 58/397 (14%)
Query: 38 SLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 97
S+ +R+++ L YN+L+ + + V +L TPN T +++ G
Sbjct: 155 SMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGY 214
Query: 98 CAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV 157
C ++EA +K+ G + FTY +LI G R +
Sbjct: 215 CKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKN-------------------- 254
Query: 158 EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA----------------NDW----- 196
VD A +FL M ++ + V+YT++I GFC A N W
Sbjct: 255 ---VDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRT 311
Query: 197 --------------NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
EA + EM ++ QPNV T+ V++ LC++ D+A ++L+ M+
Sbjct: 312 YTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGML 371
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ P+ YN L+DG+C G A E+ MES C+ +Y+ LI G+C+ K I
Sbjct: 372 EKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIH 431
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+SL +ML + ++P+VV YN L + + A+KL M G+ D WTY FI
Sbjct: 432 KAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFI 491
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
D LCK + EA LF +L+ + + Y+ LIDG
Sbjct: 492 DTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDG 528
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 185/471 (39%), Gaps = 88/471 (18%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V ++NIL K + L +N +GL PD +TY++ I+ CK G V
Sbjct: 443 RKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEE 502
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ + N V +++LI G C ++ + L K+ GC PN TYN+LI+
Sbjct: 503 ARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLID 562
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFV------------DKAKELFLQMKDENINP 178
G + + A L + M + E + + D+A ++F QM +P
Sbjct: 563 GYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHP 622
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
DV YT+ I +C +A+ L+ +M +G+ P+ + + + +D + G +D A +L
Sbjct: 623 DVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGIL 682
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK---------------------------- 270
M ++G P+ + Y+ CL ++ AK
Sbjct: 683 KRMHEVGCEPSYYTYS------CLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRR 736
Query: 271 -------ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
+LF M GC +Y I G CK +E A L+ M KG P+ IY
Sbjct: 737 VDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIY 796
Query: 324 NT-----------------------------------LFVVLFEIHQVERAFKLFDEMQR 348
N+ L L++ E+A ++F +
Sbjct: 797 NSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQ 856
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
D ++ IDGL K + +LF + C++ + Y+ LI+G
Sbjct: 857 CEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEG 907
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 138/333 (41%), Gaps = 6/333 (1%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P ++ IL L K+ +D +F ++ STG PD++ Y I+ +C GR+
Sbjct: 583 RDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKD 642
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
V++ ++ P+ + +T I I A + ++ GCEP+ +TY+ LI
Sbjct: 643 AEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIK 702
Query: 131 GLYRTGHTIVALNLFEEM----ASGNGEFGVEGFVDK--AKELFLQMKDENINPDVVTYT 184
L V+ + + N VD +LF +M + P+ TY
Sbjct: 703 HLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYG 762
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
I G C A L M ++G PN +N ++ C+ G EA R LD+MI+
Sbjct: 763 KFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIEN 822
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
P+ L+ G G +AK +F S + + +LI+G K +
Sbjct: 823 RHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKC 882
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
L+G M ++G + Y+ L I +++
Sbjct: 883 SDLFGIMETQGCQIHPKTYSMLIEGFDGIQEID 915
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 180/365 (49%), Gaps = 23/365 (6%)
Query: 35 TVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 94
T+ + + + G P + YNILIN FCK G + ++ I + P V+F +LI
Sbjct: 206 TIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLI 265
Query: 95 KGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE 154
GLC + E L + P+VFTY+ LI+GL +
Sbjct: 266 NGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCK-------------------- 305
Query: 155 FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
EG +D A++LF +M+ + P+ +T+T++I G C + + A +M+ GV+P+
Sbjct: 306 ---EGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPD 362
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
+V +N +++ LCK G +++A +L+D M +G++P+ Y TL+DG+C G + A E+
Sbjct: 363 LVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRK 422
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
M G +++ LI+G+C++ + A EM+ G+KPD Y + +
Sbjct: 423 GMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKG 482
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
V+ FKL EMQ +G TY ++GLCK + A L + L D YN
Sbjct: 483 NVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYN 542
Query: 395 CLIDG 399
L++G
Sbjct: 543 ILLEG 547
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 175/348 (50%), Gaps = 26/348 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P SFN L L K+++ D L K + ++PD++TY++LI+ CK GR+ +
Sbjct: 256 PTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQL 315
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + PN +TFT+LI G C RI A + ++ G +P++ YNTL+NGL +
Sbjct: 316 FDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCK 375
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G V+KA++L +M+ + PD +TYT++I G+C
Sbjct: 376 VGD-----------------------VNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEG 412
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
D A + M ++GV + V F ++ C++G++ +A R L M++ G++P+ Y
Sbjct: 413 DLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYT 472
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
++DG+C G V +L M+ G V +Y++L+NG CK +++ A L ML+
Sbjct: 473 MVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNL 532
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
G+ PD + YN L + + E KL +E G+ D Y + +
Sbjct: 533 GVTPDDITYNILLEGHCKNGKAEDLLKLRNE---KGLIVDYAYYTSLV 577
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 158/323 (48%), Gaps = 23/323 (7%)
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
IL F P + LI C E I +A +F ++R G P ++NTLINGL ++ +
Sbjct: 214 ILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRN 273
Query: 138 TIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
+D+ L M++ I PDV TY+ +I G C +
Sbjct: 274 -----------------------LDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLD 310
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
A+ L EM +G++PN +TF ++D C++ ++D A M+ +GV+P+ +YNTL+
Sbjct: 311 VAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLL 370
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
+G C G VN+A++L M +G +Y+ LI+GYCK ++E A+ + M +G+
Sbjct: 371 NGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVV 430
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
D V + L +V A + EM G+ D TY IDG CK + +L
Sbjct: 431 LDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKL 490
Query: 378 FRTLRILKCELDIRAYNCLIDGL 400
+ ++I + + YN L++GL
Sbjct: 491 LKEMQINGHKPGVITYNVLMNGL 513
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 165/321 (51%), Gaps = 13/321 (4%)
Query: 92 SLIKGLCAESRIMEAAALFTK-LRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS 150
S+I+ L + AA++F L G + F ++ L+ + +G A+ F + +
Sbjct: 122 SIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRN 181
Query: 151 GNGEFGVEG---FVDKA---------KELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
N + G +DK + ++ + P V Y +I FC +
Sbjct: 182 SNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRD 241
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
AK + E+ +G++P V+FN +++ LCK+ +DE RL M + + P+ F Y+ L+
Sbjct: 242 AKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIH 301
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G C GR++ A++LF M+ G +++ LI+G C+++ I+ A++ Y +ML+ G+KP
Sbjct: 302 GLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKP 361
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
D+V+YNTL L ++ V +A KL DEM+ G+ D TY T IDG CK + A+E+
Sbjct: 362 DLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIR 421
Query: 379 RTLRILKCELDIRAYNCLIDG 399
+ + LD A+ LI G
Sbjct: 422 KGMNEEGVVLDNVAFTALISG 442
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 139/296 (46%), Gaps = 27/296 (9%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M R P +F L +++ D+ ++ + ++ + G+ PDL YN L+N
Sbjct: 315 LFDEM-QQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGL 373
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK+G V+ ++ + P+ +T+T+LI G C E + A + + G +
Sbjct: 374 CKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDN 433
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+ LI+G R +G V A+ +M + + PD T
Sbjct: 434 VAFTALISGFCR-----------------------DGRVRDAERTLREMVEAGMKPDDAT 470
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT VI G+C + LL EM G +P V+T+NV+M+ LCK G+M A+ LL+ M+
Sbjct: 471 YTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAML 530
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
+GV P+ YN L++G C G +A++L G Y+ L++ Y K+
Sbjct: 531 NLGVTPDDITYNILLEGHCKNG---KAEDLLKLRNEKGLIVDYAYYTSLVSEYNKS 583
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 80/176 (45%)
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
+ + GK AS ++ G R + FV++ LM + +G V+ A + F + +
Sbjct: 128 VSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIP 187
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
L++ + + Y E+L G P V YN L + + A +F+
Sbjct: 188 FHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFN 247
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
E+++ G+ T ++ T I+GLCK+ + E L +T+ + D+ Y+ LI GL
Sbjct: 248 EIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGL 303
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 182/386 (47%), Gaps = 8/386 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ + G L + LF+ + GL D+YTY I+++ FCK G +
Sbjct: 481 PDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ TPN VT+T+LI ++ A LF + GC PN+ TY+ LI+G +
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENIN-PDVVTYTSVIRGFCYA 193
G A +FE M V+ + F Q D+N P+VV Y +++ GFC
Sbjct: 601 AGQMEKACQIFERMCGSKDVPDVDMY-------FKQYDDDNSERPNVVIYGALLDGFCKL 653
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+ EA+ LL M +G +PN + ++ ++D LCK GK+DEA + M + G + Y
Sbjct: 654 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTY 713
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
++L+D + R + A ++ M C V Y+ +I+G CK + + A L M
Sbjct: 714 SSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 773
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG +P+VV Y + I ++E +L + M GVA + TYR ID CKN +
Sbjct: 774 KGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDV 833
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
A L ++ Y +I+G
Sbjct: 834 AHNLLEEMKQTHWPTHAAGYRKVIEG 859
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 186/420 (44%), Gaps = 37/420 (8%)
Query: 15 PPVCSFNILFGCLAKNKH------YDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV 68
P +NIL G + +K + + + +TG+ + + C C G+
Sbjct: 405 PGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKY 464
Query: 69 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTL 128
F V+ ++ F P+ T++ ++ LC S++ A LF +++ G +V+TY +
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 129 INGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENI 176
++ + G A F EM V + V A ELF M E
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMM------------------DQGVQPNVVTF 218
P++VTY+++I G C A +A C + E M D +PNVV +
Sbjct: 585 LPNIVTYSALIDGHCKAGQMEKA-CQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIY 643
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
++D CK +++EA +LLD M G PN VY+ L+DG C G+++ A+E+ M
Sbjct: 644 GALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSE 703
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
G T+++YS LI+ Y K K + A + +ML P+VVIY + L ++ + +
Sbjct: 704 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 763
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A+KL M+ G + TY IDG + I +EL + + Y LID
Sbjct: 764 AYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLID 823
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/468 (24%), Positives = 202/468 (43%), Gaps = 74/468 (15%)
Query: 5 DYMLNMRPSP--PPVCSFNILF-GCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
D++ MR + P V +++ L GCL K K + + G +P +N L++
Sbjct: 323 DFLNRMRATSCLPNVVTYSTLLCGCLNK-KQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 381
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE----------------SRIME 105
+C G S+ + +L ++++ TP V + LI +C + S ++
Sbjct: 382 YCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLA 441
Query: 106 AAALFTKLRVF-------------------------GCEPNVFTYNTLINGLYRTGHTIV 140
+ K+ V G P+ TY+ ++ L +
Sbjct: 442 TGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMEL 501
Query: 141 ALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
A LFEEM G F G +++A++ F +M++ P+VVTYT++I
Sbjct: 502 AFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIH 561
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI------ 242
+ A + A L M+ +G PN+VT++ ++D CK G+M++A ++ + M
Sbjct: 562 AYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVP 621
Query: 243 -----------QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
RPN +Y L+DGFC RV A++L +M GC Y L
Sbjct: 622 DVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDAL 681
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I+G CK +++ A + EM G + Y++L F++ + + A K+ +M +
Sbjct: 682 IDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 741
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
A + Y IDGLCK EA +L + + C+ ++ Y +IDG
Sbjct: 742 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG 789
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 190/438 (43%), Gaps = 64/438 (14%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L K K LF+ + S G P++ TY+ LI+ CK G++ +
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQI 610
Query: 75 LGRILRS-----------------CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 117
R+ S PN V + +L+ G C R+ EA L + + G
Sbjct: 611 FERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEG 670
Query: 118 CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE---FGVEGFVDK---------AK 165
CEPN Y+ LI+GL + G A + EM+ + +D+ A
Sbjct: 671 CEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 730
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
++ +M + + P+VV YT +I G C +EA L+ M ++G QPNVVT+ ++D
Sbjct: 731 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 790
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM--------- 276
+ GK++ LL+ M GV PN Y L+D C G ++ A L M
Sbjct: 791 GRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHA 850
Query: 277 ---------------ESMGCTHTVFS---------YSILINGYCKNKEIEGALSLYGEM- 311
ES+G + Y +L++ K + +E AL L E+
Sbjct: 851 AGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVA 910
Query: 312 -LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
S + YN+L L ++V++AF+LF EM + GV + T+ + I GL +NS
Sbjct: 911 TFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSK 970
Query: 371 IVEAVELFRTLRILKCEL 388
I EA+ L + + C L
Sbjct: 971 ISEALLLLDFISHMVCPL 988
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 192/456 (42%), Gaps = 73/456 (16%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L K D+ + + ++ L D +T CK+G+ +
Sbjct: 233 PSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTL 292
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING--- 131
+ F P+ V +T LI GLC S EA ++R C PNV TY+TL+ G
Sbjct: 293 MET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349
Query: 132 ------------------------------------------------LYRTGHT--IVA 141
+ + GHT V
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVV 409
Query: 142 LNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
N+ G+ + ++ A++ + +M + + + +S R C A + +A
Sbjct: 410 YNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFS 469
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
++ EM+ QG P+ T++ ++ LC KM+ A L + M + G+ + + Y ++D FC
Sbjct: 470 VIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 529
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
G + +A++ F M +GCT V +Y+ LI+ Y K K++ A L+ MLS+G P++V
Sbjct: 530 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIV 589
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEM--QRDGVAADTW---------------TYRTFIDG 364
Y+ L + Q+E+A ++F+ M +D D + Y +DG
Sbjct: 590 TYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDG 649
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
CK + EA +L + + CE + Y+ LIDGL
Sbjct: 650 FCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 685
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 156/385 (40%), Gaps = 67/385 (17%)
Query: 56 NILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV 115
N+L+ +C+ G S LGR+ F P+ T+ LI+ + A+ + ++ +
Sbjct: 204 NVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSL 263
Query: 116 FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDEN 175
+ FT L + G K +E M+ EN
Sbjct: 264 ANLRMDGFTLRCYAYSLCKVG--------------------------KWREALTLMETEN 297
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
PD V YT +I G C A+ + EA L M PNVVT++ ++ ++
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCK 357
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
R+L++M+ G P+ ++N+L+ +C +G + A +L M G T Y+ILI
Sbjct: 358 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSI 417
Query: 296 CKNKE-----------------------------------------IEGALSLYGEMLSK 314
C +K+ E A S+ EM+ +
Sbjct: 418 CGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 477
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G PD Y+ + L ++E AF LF+EM+R G+ AD +TY +D CK I +A
Sbjct: 478 GFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+ F +R + C ++ Y LI
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHA 562
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 137/314 (43%), Gaps = 16/314 (5%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
++M P ++ L L K D + ++ G LYTY+ LI+ + K+ R
Sbjct: 666 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKR 725
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
VL ++L + PN V +T +I GLC + EA L + GC+PNV TY
Sbjct: 726 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 785
Query: 128 LINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDEN 175
+I+G R G L L E M S G +D A L +MK +
Sbjct: 786 MIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH 845
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
Y VI GF ++ E+ LL E+ P + + +++D L K +++ A
Sbjct: 846 WPTHAAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMAL 903
Query: 236 RLLDLMIQIGVR--PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
RLL+ + + YN+L++ CL +V++A LF M G + ++ LI
Sbjct: 904 RLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIK 963
Query: 294 GYCKNKEIEGALSL 307
G +N +I AL L
Sbjct: 964 GLFRNSKISEALLL 977
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 107/238 (44%), Gaps = 23/238 (9%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ + P V ++ + + +T L L +R+ S G+ P+ TY +LI+ CK G
Sbjct: 770 MMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNG 829
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ +L + ++ + +A + +I+G E +E+ L ++ P + Y
Sbjct: 830 ALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLSLYR 887
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
L++ L + +AL L EE+A+ + VD + TY S+
Sbjct: 888 LLVDNLIKAQRLEMALRLLEEVATFSAT-----LVDYSS----------------TYNSL 926
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
I C AN ++A L EM +GV P + TF ++ L +N K+ EA LLD + +
Sbjct: 927 IESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLDFISHM 984
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 62/160 (38%), Gaps = 7/160 (4%)
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS--YSILINGYCKNKE 300
QIG + + VYN L+D +EL + VF ++L+ YC++
Sbjct: 158 QIGYKHTSPVYNALVDLIVRDDDEKVPEELLQQIRDDD--KEVFGEFLNVLVRKYCRSGS 215
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
AL G + +P YN L + ++ A + EM + D +T R
Sbjct: 216 FSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRC 275
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ LCK EA+ L T + D Y LI GL
Sbjct: 276 YAYSLCKVGKWREALTLMETENFVP---DTVFYTKLISGL 312
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/472 (27%), Positives = 203/472 (43%), Gaps = 90/472 (19%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ L K + +DT + + G + TYN+LI C+ G V F
Sbjct: 242 PDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGF 301
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ P+ T+ +LI GLC R EA AL ++ +PNV Y LI+G R
Sbjct: 302 KKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMR 361
Query: 135 TGHTIVALNLFEEMASGNGEFGVE----------------GFVDKAKELFLQMKDENINP 178
G+ A + +EM + GV+ G +D+A L QM ++ P
Sbjct: 362 EGNADEAFKMIKEMVAA----GVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRP 417
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D +TY +I G + +A LL EM + G+ PNV T+++++ LC++G+ ++AS LL
Sbjct: 418 DTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLL 477
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCL-----------------------------------T 263
+ M G++PNAFVY L+ G+C
Sbjct: 478 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 537
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
GRV + + F M+ G F+YS LI+GY KN ++E A L ML G+KP+ VIY
Sbjct: 538 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIY 597
Query: 324 NTLFVVLFEIHQVER-----------------------------------AFKLFDEMQR 348
L F+ +E+ AF++ +++
Sbjct: 598 IDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEK 657
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+G D Y + I GLCK + +A + + + +I YN LIDGL
Sbjct: 658 NGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGL 709
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 173/348 (49%), Gaps = 12/348 (3%)
Query: 46 TGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME 105
G+ PD+YTY+ LI +CK+ VL + N VT+ LI GLC + E
Sbjct: 238 AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEE 297
Query: 106 AAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV-------- 157
A + +G P+ FTY LINGL ++ + A L +EM+ + V
Sbjct: 298 AFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLID 357
Query: 158 ----EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
EG D+A ++ +M + P+ +TY +++RG C + A LL +M+ +P
Sbjct: 358 GFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRP 417
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
+ +T+N+I++ ++ +A RLL M G+ PN + Y+ ++ G C +G +A +L
Sbjct: 418 DTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLL 477
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
M + G F Y+ LI+GYC+ + A ++ +M + PD+ YN+L L ++
Sbjct: 478 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 537
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+VE + K F +MQ G+ + +TY I G KN + A +L + +
Sbjct: 538 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 585
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 189/397 (47%), Gaps = 12/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + L + + D + K + + G+ P+ TY+ L+ CKMG++ ++
Sbjct: 347 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 406
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++R P+ +T+ +I+G +A L +++ G PNV+TY+ +I+GL +
Sbjct: 407 LKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQ 466
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+G A +L EEM + + EG V A E+F +M N+ PD+
Sbjct: 467 SGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYC 526
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S+I G E+ +M ++G+ PN T++ ++ KNG ++ A +L+ M+
Sbjct: 527 YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 586
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G++PN +Y L++ + + + + F SM G Y ILI+ + +E
Sbjct: 587 DTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNME 646
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A + + G PDV +Y++L L + E+AF + DEM + GV + Y I
Sbjct: 647 AAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALI 706
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
DGLCK+ I A +F ++ + Y LIDG
Sbjct: 707 DGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDG 743
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 185/397 (46%), Gaps = 13/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N++ ++ L + + G+ P++YTY+I+I+ C+ G +
Sbjct: 417 PDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDL 476
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + PNA + LI G C E + A +F K+ P+++ YN+LI GL +
Sbjct: 477 LEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSK 536
Query: 135 TGHTIVALNLFEEMASGN---GEFGVEGFV---------DKAKELFLQMKDENINPDVVT 182
G + F +M EF G + + A++L +M D + P+ V
Sbjct: 537 VGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVI 596
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++ + ++D + M+DQGV + + +++ L +G M+ A R+L +
Sbjct: 597 YIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIE 656
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G P+ VY++L+ G C T +A + M G + Y+ LI+G CK+ +I
Sbjct: 657 KNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDIS 716
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A +++ +L+KG+ P+ V Y +L ++ + AF L++EM G+ D + Y
Sbjct: 717 YARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLT 776
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G + +A+ L + L+ I ++N L+DG
Sbjct: 777 TGCSSAGDLEQAMFLIEEM-FLRGHASISSFNNLVDG 812
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 182/410 (44%), Gaps = 39/410 (9%)
Query: 7 MLNMRPSPPPVCS----------------FNILFGCLAKNKHYDTVLSLFKRLNSTGLFP 50
M+ PSPP V + ++L K+ + + G+ P
Sbjct: 148 MIRAYPSPPVVLASIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAP 207
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 110
+ N L+ + ++ + V ++ + +P+ T+++LI+ C A +
Sbjct: 208 SIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVL 267
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQ 170
++R GC N TYN LI GL R+G V++A
Sbjct: 268 VEMRERGCGLNTVTYNVLIAGLCRSGA-----------------------VEEAFGFKKD 304
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M+D + PD TY ++I G C + NEAK LL EM ++PNVV + ++D + G
Sbjct: 305 MEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGN 364
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
DEA +++ M+ GV+PN Y+ L+ G C G+++RA L M +Y++
Sbjct: 365 ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNL 424
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+I G+ ++ + A L EM + GI P+V Y+ + L + + E+A L +EM G
Sbjct: 425 IIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG 484
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + + Y I G C+ + A E+F + + D+ YN LI GL
Sbjct: 485 LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 534
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 162/373 (43%), Gaps = 46/373 (12%)
Query: 29 KNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 88
K+ + V S FK + G+ D Y ILI+ G + F VL I ++ P+
Sbjct: 606 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVH 665
Query: 89 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM 148
++SLI GLC + +A + ++ G +PN+ YN LI+GL ++G A N+F +
Sbjct: 666 VYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI 725
Query: 149 ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD 208
+ +G V P+ VTYTS+I G C D + A L EM+
Sbjct: 726 LA-------KGLV----------------PNCVTYTSLIDGSCKVGDISNAFYLYNEMLA 762
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
G+ P+ ++V+ G +++A L++ M G + +N L+DGFC G++
Sbjct: 763 TGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQE 821
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
+L + G + +I+G + ++ +++ E+ K + +++LF+
Sbjct: 822 TLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFM 881
Query: 329 VLFEIHQVERAFKLFDEMQRD--------------------GVAADTWTYRTFIDGLCKN 368
+ I+Q + + D+M RD +Y +D LC+
Sbjct: 882 DM--INQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRK 939
Query: 369 SYIVEAVELFRTL 381
+ EA+ L + +
Sbjct: 940 GKLSEALNLLKEM 952
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 147/345 (42%), Gaps = 55/345 (15%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
S P V ++ L L K + + ++ G+ P++ YN LI+ CK G +S+
Sbjct: 660 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 719
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
V IL PN VT+TSLI G C I A L+ ++ G P+ F Y+ L G
Sbjct: 720 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGC 779
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
G A+ L EEM FL+ + + ++ +++ GFC
Sbjct: 780 SSAGDLEQAMFLIEEM-------------------FLRG-----HASISSFNNLVDGFCK 815
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA------------------ 234
E LL +M +G+ PN +T I+ L + GK+ E
Sbjct: 816 RGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARH 875
Query: 235 -SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA---KELFVSMES-MGCTHTVFSYS 289
S L MI G P V + + D C G +++A +++ V+ + MGC+ SY
Sbjct: 876 FSSLFMDMINQGKIPLDVVDDMIRD-HCKEGNLDKALMLRDVIVAKSAPMGCS----SYL 930
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
+++ C+ ++ AL+L EM +GI P N ++L +H
Sbjct: 931 AIVDNLCRKGKLSEALNLLKEMDKRGICPS---ENQCLILLTNLH 972
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 189/399 (47%), Gaps = 43/399 (10%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
VC+F C+ K ++ ++ + + S G PD TY+ +I C +V F +
Sbjct: 90 VCNFTRCLCCIGK---FEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQ 146
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ R+ TP+ T+T+L+ C I +A F +++ GC PNV TY LI+ +T
Sbjct: 147 EMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTR 206
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+ +A E+F M P++VTYT++I G C A +
Sbjct: 207 K-----------------------LSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGET 243
Query: 197 NEAKCLLIEMMDQGV-----------------QPNVVTFNVIMDELCKNGKMDEASRLLD 239
+A + M + V +PNVVT+ ++D LCK K+ EA LL+
Sbjct: 244 EKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLE 303
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M G PN +Y+ L+DGFC G+++ A+E+F M GC+ V++YS LI+ K+K
Sbjct: 304 TMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDK 363
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++ AL + +ML P+VVIY + L ++ + + A++L M+ G + TY
Sbjct: 364 RLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYT 423
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
IDG K + +EL + + C + Y LI+
Sbjct: 424 AMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLIN 462
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 185/386 (47%), Gaps = 8/386 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ + G L + LF+ + G+ PD+YTY L++ FCK+G +
Sbjct: 120 PDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNW 179
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + PN VT+T+LI ++ A +F + GC PN+ TY LI+G +
Sbjct: 180 FDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCK 239
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENIN-PDVVTYTSVIRGFCYA 193
G T A ++ M N + + +++ ++ D + P+VVTY +++ G C A
Sbjct: 240 AGETEKACQIYARMK--NDKVDIPDV-----DIYFRIVDSELKEPNVVTYGALVDGLCKA 292
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+ EA+ LL M +G +PN + ++ ++D CK GK+DEA + M+ G PN + Y
Sbjct: 293 HKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTY 352
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
++L+D R++ A ++ M C V Y+ +++G CK + + A L M
Sbjct: 353 SSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEE 412
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG P+VV Y + + +V+R +L M G A + TYR I+ C + +
Sbjct: 413 KGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDD 472
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
A +L ++ I Y +I+G
Sbjct: 473 AHKLLEEMKQTYWPKHIGMYRKVIEG 498
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 184/461 (39%), Gaps = 111/461 (24%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L K + +F+ + S G P++ TY LI+ CK G +
Sbjct: 190 PNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQI 249
Query: 75 LGRILRSCF-----------------TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 117
R+ PN VT+ +L+ GLC ++ EA L + + G
Sbjct: 250 YARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEG 309
Query: 118 CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENIN 177
CEPN Y+ LI+G + G +D+A+E+F +M +
Sbjct: 310 CEPNQIIYDALIDGFCKVGK-----------------------LDEAQEVFTKMLGHGCS 346
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P+V TY+S+I + A +L +M++ PNVV + ++D LCK GK DEA RL
Sbjct: 347 PNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRL 406
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
+ +M + G PN Y ++DGF GRV+R EL M S GC +Y +LIN C
Sbjct: 407 MLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCA 466
Query: 298 --------------------------NKEIEG-------ALSLYGEMLSKGIKPDVVIYN 324
K IEG +L L E+ G P + +Y
Sbjct: 467 AGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVASLGLLAELSEDGSVPILPVYK 526
Query: 325 TL---------FVVLFEIHQ-------------------------VERAFKLFDEMQRDG 350
L + E+H+ V++AFKL+ +M R G
Sbjct: 527 LLIDNFIKAGRLEMALELHEELSSFSAAYQNTYVSLIESLTLACKVDKAFKLYSDMTRRG 586
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIR 391
+ I GL + EA++L ++ C++DI
Sbjct: 587 FVPELSMLVCLIKGLLRVGKWEEALQLSDSI----CQMDIH 623
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 169/375 (45%), Gaps = 38/375 (10%)
Query: 45 STGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 104
+ G +P +N L++ +C+ G + + +L +++ + P V + LI G+C+ +
Sbjct: 4 TEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDL- 62
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNL--FEEMASGNGEFGVEGFVD 162
+ V G + N + G + +N+ F G+F +
Sbjct: 63 ------PSMEVIGLAERAY------NEMLEMGVVLNKVNVCNFTRCLCCIGKF------E 104
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
KA + +M + PD TY+ VI C A+ +A L EM G+ P+V T+ ++
Sbjct: 105 KAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLL 164
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
D CK G +++A D M Q G PN Y L+ + T +++RA E+F M S GC
Sbjct: 165 DRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCV 224
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI-----------------KPDVVIYNT 325
+ +Y+ LI+G+CK E E A +Y M + + +P+VV Y
Sbjct: 225 PNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGA 284
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L L + H+V+ A L + M +G + Y IDG CK + EA E+F +
Sbjct: 285 LVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHG 344
Query: 386 CELDIRAYNCLIDGL 400
C ++ Y+ LID L
Sbjct: 345 CSPNVYTYSSLIDKL 359
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 157/339 (46%), Gaps = 35/339 (10%)
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
I C+ P+ + F SL+ C A L K+ + G +P YN LI G+ T
Sbjct: 3 ITEGCY-PSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICST-- 59
Query: 138 TIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
E++ S V G ++A L+M + + V + R C +
Sbjct: 60 --------EDLPS----MEVIGLAERAYNEMLEM---GVVLNKVNVCNFTRCLCCIGKFE 104
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
+A ++ EMM +G P+ T++ ++ LC K+++A +L M + G+ P+ + Y TL+
Sbjct: 105 KAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLL 164
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
D FC G + +A+ F M+ GC V +Y+ LI+ Y K +++ A ++ MLS G
Sbjct: 165 DRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCV 224
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV-----------------AADTWTYRT 360
P++V Y L + + E+A +++ M+ D V + TY
Sbjct: 225 PNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGA 284
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+DGLCK + EA +L T+ + CE + Y+ LIDG
Sbjct: 285 LVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDG 323
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 143/339 (42%), Gaps = 26/339 (7%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+++ P ++ L K D +F ++ G P++YTY+ LI+ K R
Sbjct: 305 MSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKR 364
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ VL ++L + PN V +T ++ GLC + EA L + GC PNV TY
Sbjct: 365 LDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTA 424
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
+I+G FG G VD+ EL M + P+ +TY +I
Sbjct: 425 MIDG-----------------------FGKAGRVDRCLELLQLMTSKGCAPNFITYRVLI 461
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
C A ++A LL EM ++ + +++ + + + LL + + G
Sbjct: 462 NHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGF--SHEFVASLGLLAELSEDGSV 519
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P VY L+D F GR+ A EL + S + +Y LI +++ A L
Sbjct: 520 PILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQ-NTYVSLIESLTLACKVDKAFKL 578
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
Y +M +G P++ + L L + + E A +L D +
Sbjct: 579 YSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSDSI 617
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 106/235 (45%), Gaps = 6/235 (2%)
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M E P + + S++ +C + D+ A LL +M+ G QP V +N+++ +C
Sbjct: 2 MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61
Query: 231 MDE------ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
+ A R + M+++GV N C G+ +A + M S G
Sbjct: 62 LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
+YS +I C ++E A L+ EM GI PDV Y TL ++ +E+A FD
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFD 181
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
EMQ+DG A + TY I K + A E+F + C +I Y LIDG
Sbjct: 182 EMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDG 236
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 84/199 (42%), Gaps = 41/199 (20%)
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
+MI G P+ ++N+L+ +C +G A +L M G Y+ILI G C +
Sbjct: 1 MMITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTE 60
Query: 300 EI-----------------------------------------EGALSLYGEMLSKGIKP 318
++ E A ++ EM+SKG P
Sbjct: 61 DLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIP 120
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
D Y+ + L +VE+AF+LF EM+R+G+ D +TY T +D CK I +A F
Sbjct: 121 DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWF 180
Query: 379 RTLRILKCELDIRAYNCLI 397
++ C ++ Y LI
Sbjct: 181 DEMQQDGCAPNVVTYTALI 199
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 13/204 (6%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ + P V ++ + K D L L + + S G P+ TY +LIN C G
Sbjct: 409 MMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAG 468
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ +L + ++ + + + +I+G E + + L +L G P + Y
Sbjct: 469 LLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHE--FVASLGLLAELSEDGSVPILPVYK 526
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFG------VEGF-----VDKAKELFLQMKDEN 175
LI+ + G +AL L EE++S + + +E VDKA +L+ M
Sbjct: 527 LLIDNFIKAGRLEMALELHEELSSFSAAYQNTYVSLIESLTLACKVDKAFKLYSDMTRRG 586
Query: 176 INPDVVTYTSVIRGFCYANDWNEA 199
P++ +I+G W EA
Sbjct: 587 FVPELSMLVCLIKGLLRVGKWEEA 610
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 200/396 (50%), Gaps = 16/396 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+F +L L + + V+ LF L S G+ TY ++++ C G + ++ R
Sbjct: 21 AFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELV-RE 79
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
L +TP + +I GLC SR+M+A + K+ PNVFTY L+NGL R+ T
Sbjct: 80 LSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKT 139
Query: 139 IVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
+A +F+EM NG G +D+A + ++ + + DV+T T+
Sbjct: 140 KLAREVFQEMKR-NGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTT 198
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DLMIQI 244
++ G C A+ ++A + EM GV+PN VT++ ++ ++G++D R + +
Sbjct: 199 IVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARK 258
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G A Y +D C G ++RA++ + G V +YS+LIN + + + + +
Sbjct: 259 GGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDAS 318
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L L +M G+KPDVV Y+TL VL + + + AF+L + M+ G + TY + +DG
Sbjct: 319 LELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDG 378
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LCK+ + E ++ + +C D+ Y+ +++GL
Sbjct: 379 LCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGL 414
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 172/347 (49%), Gaps = 15/347 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ IL L ++ +F+ + G P+ TY LI + G + V
Sbjct: 121 PNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRV 180
Query: 75 LGRILRSCFTP-NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ RS P + +T T+++ GLC SR+ +A ++R G PN TY+ L++G
Sbjct: 181 MIE-QRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFR 239
Query: 134 RTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDV 180
+ G + FEE + G G++D+A++ +++ + PDV
Sbjct: 240 QHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDV 299
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY+ +I F A ++ + LL +M GV+P+VVT++ +++ LCK K +A RLL+L
Sbjct: 300 VTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLEL 359
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M G PN YN++MDG C +G+++ ++ M C+ V +YSI++NG K
Sbjct: 360 MEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGM 419
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
++ A+ L+ + S PD Y+ + L ++E A ++ M+
Sbjct: 420 LDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGME 466
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 111/236 (47%), Gaps = 1/236 (0%)
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
AK L + + + D +T + + ++E L + +GV T+ +++D
Sbjct: 3 AKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVD 62
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
LC G ++A L+ + + P F+YN ++ G C RV A ++ M
Sbjct: 63 GLCGAGMANQALELVRELSGV-YTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVP 121
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
VF+Y+IL+NG C++ + + A ++ EM G KP+ + Y TL L +++ A ++
Sbjct: 122 NVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVM 181
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
E + + D T T + GLCK S + +A++ +R + + Y+ L+ G
Sbjct: 182 IEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHG 237
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 1/202 (0%)
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
AK L +++ GV+ + F ++ +L + K E RL L+ GV Y ++D
Sbjct: 3 AKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVD 62
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G C G N+A EL + + T T+F Y+ +I G C+ + A + +M+ + I P
Sbjct: 63 GLCGAGMANQALELVRELSGV-YTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVP 121
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
+V Y L L ++ + A ++F EM+R+G + TY T I L + I EA+ +
Sbjct: 122 NVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVM 181
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
R L+ D+ ++ GL
Sbjct: 182 IEQRSLELPTDVITCTTIVGGL 203
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 6/172 (3%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
SPP V ++N + L K+ D V +++ + + PD+ TY+I++N K G +
Sbjct: 365 SPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAV 424
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV-FTYNTLING 131
+ I S P+A ++ +I LC ++ EA ++ + V N+ L+
Sbjct: 425 KLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDNICRALAGLVAA 484
Query: 132 LYRTGHTIVALNLFEEMASGNG----EFGVEGFVDKAKELFLQMKDENINPD 179
L T A + E+AS G + G V ++ L+ K+E+ + +
Sbjct: 485 LCDAERTDSARRIV-EVASERGHRMTKSGDTDLVKIVEDHLLESKEEHADAE 535
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 178/385 (46%), Gaps = 23/385 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + L L + + L + +++ G P Y L++ +C+ + +
Sbjct: 228 PDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKM 287
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + P AVT T+++ C E R+ A +F +++ GCEPNV+TYN ++ G
Sbjct: 288 LNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCN 347
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G V KA L QM++ + PDVVTY +IRG C
Sbjct: 348 VGK-----------------------VYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDG 384
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
A LL M G+ + T+NV++D LCK GK+DEA L D + G+RPN+ +N
Sbjct: 385 HIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFN 444
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
T+++G C G+ + A M S GC ++YS I CK K LS EML K
Sbjct: 445 TVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQK 504
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
+KP V Y + LF+ A +++ +M G + D TY T + C + EA
Sbjct: 505 DVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEA 564
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+ ++ +D AYN LIDG
Sbjct: 565 ENVVMEMKKGGIIVDAMAYNTLIDG 589
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 182/402 (45%), Gaps = 14/402 (3%)
Query: 13 SPPPVC-----SFNILFGCLAKNKHYDTVLSLFKRLNSTGL-FPDLYTYNILINCFCKMG 66
SPPP+ +F L ++ +L LF + G P TYN LI C+
Sbjct: 84 SPPPLRPLFDRTFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRA 143
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ H L ++RS + P+A TF SLI G C ++ A LF K+ + G + +Y
Sbjct: 144 DLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYA 203
Query: 127 TLINGLYRTGHTIVALNLFEEMASGN---GEFGVEGFVDKAKE-----LFLQMKDENINP 178
LI G TG AL LF E+ + V+G D + + +MK+ P
Sbjct: 204 ALIEGFCETGRVDEALELFRELEQPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRP 263
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
Y +++ +C EA+ +L EM D G+ P VT +++ C+ G+M A R+
Sbjct: 264 ATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVF 323
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
+ M G PN + YN ++ GFC G+V +A L M G V +Y++LI G C +
Sbjct: 324 ESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCID 383
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
IE A L M G+ D YN L L + +V+ A LFD ++ G+ ++ T+
Sbjct: 384 GHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTF 443
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
T I+GLCK A + C D Y+ I+ L
Sbjct: 444 NTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENL 485
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 178/417 (42%), Gaps = 36/417 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ L + + + + + GL P T ++N +C+ GR+S V
Sbjct: 263 PATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRV 322
Query: 75 LGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ L+ C PN T+ ++++G C ++ +A AL ++R G EP+V TYN LI G
Sbjct: 323 FESMKLKGC-EPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQC 381
Query: 134 RTGHTIVALNLFEEMASGNGEFGVE-------------GFVDKAKELFLQMKDENINPDV 180
GH A L M GNG + G VD+A LF ++ I P+
Sbjct: 382 IDGHIESAFRLLRLM-EGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNS 440
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VT+ +VI G C ++ A L +M+ G P+ T++ ++ LCK E +D
Sbjct: 441 VTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDE 500
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M+Q V+P+ Y ++D A ++ M S+GC+ V +Y+ + YC
Sbjct: 501 MLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGR 560
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ A ++ EM GI D + YNTL I + + A + M GVA+ +
Sbjct: 561 LHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMT--GVASMPNHFTF 618
Query: 361 FI------------------DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
FI + K + + ELF ++ RAY +++G
Sbjct: 619 FILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEG 675
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 159/402 (39%), Gaps = 39/402 (9%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FN + L K +D + +++ S G PD YTY+ I CK G
Sbjct: 438 PNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSF 497
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ +L+ P+ V +T +I L E A ++ ++ GC P+V TY T +
Sbjct: 498 IDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRA--- 554
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ EG + +A+ + ++MK I D + Y ++I G
Sbjct: 555 --------------------YCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIG 594
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIM----------------DELCKNGKMDEASRLL 238
+ A +L M PN TF +++ + K ++ + L
Sbjct: 595 KTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELF 654
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
+LM + V +A Y +++GF R++ L M+ Y+ L+N +CK
Sbjct: 655 ELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKL 714
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+ A +L M+ G P+++ Y L Q +RA ++F ++ D +
Sbjct: 715 RMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVW 774
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ IDGL + + ++ L +KC+ Y L + L
Sbjct: 775 KIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTEEL 816
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/445 (29%), Positives = 206/445 (46%), Gaps = 49/445 (11%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF+ M R + P V ++NIL L + + L + + GLFP++ T NI+I+
Sbjct: 392 IFEEM--KRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRL 449
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK ++ + + TPNAVTF+SLI GL R+ +A +L+ K+ G P
Sbjct: 450 CKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGA 509
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMA--------------------SGNGEFG------ 156
Y +LI ++ G +++EM +G E G
Sbjct: 510 IVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFRE 569
Query: 157 --VEGFVDKAK-------------------ELFLQMKDENINPDVVTYTSVIRGFCYAND 195
GF+ A+ ELF MK++ D Y +VI GFC +
Sbjct: 570 INAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGK 629
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
N+A LL EM +G P VVT+ ++D L K ++DEA L + G++ N VY++
Sbjct: 630 VNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSS 689
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L+DGF GR++ A + + G T V++++ L++ K +EI AL + M
Sbjct: 690 LIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLK 749
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
P+ + Y+ L L + + +AF + EMQ+ G+ +T TY T I GL K I+EA
Sbjct: 750 CPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEAS 809
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
LF + D +YN +I+GL
Sbjct: 810 GLFSRFKANGGIPDSASYNAMIEGL 834
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 183/392 (46%), Gaps = 13/392 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F L A+ D LSL + S L D+ YN+ I+CF K G+V + +
Sbjct: 233 FTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMK 292
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
P+ VT+TS+I LC +R+ EA LF +L P + YNT+I G G
Sbjct: 293 SHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFD 352
Query: 140 VALNLFE-EMASGNGE-----------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
A L E + A G+ G + V++A +F +MK + + P+V TY +I
Sbjct: 353 EAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILI 411
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
C N A + +M G+ PNV+T N+++D LCK K++EA + + M
Sbjct: 412 DMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCT 471
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
PNA +++L+DG GRV+ A L+ M G Y+ LI + K E +
Sbjct: 472 PNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKI 531
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
Y EM+ G PD+ + NT +F+ + E+ LF E+ G D +Y I GL K
Sbjct: 532 YKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVK 591
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
E ELF ++ C LD AYN +IDG
Sbjct: 592 AGLANETYELFYAMKEQGCVLDTHAYNAVIDG 623
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 183/398 (45%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F+ L L K D SL++++ G P Y LI F K GR G +
Sbjct: 472 PNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKI 531
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ + +P+ + + + + ALF ++ G P+ +Y+ LI+GL +
Sbjct: 532 YKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVK 591
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G LF M F G V+KA +L +MK + P VVT
Sbjct: 592 AGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVT 651
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y SVI G + +EA L E G++ NVV ++ ++D K G++DEA +++ ++
Sbjct: 652 YGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELM 711
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q G+ PN + +N L+D +N A F SM+ + C +YSILING C+ ++
Sbjct: 712 QKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFN 771
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A + EM G+KP+ + Y T+ L + + A LF + +G D+ +Y I
Sbjct: 772 KAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMI 831
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+GL + ++A LF R+ C + + L+D L
Sbjct: 832 EGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDAL 869
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 190/463 (41%), Gaps = 83/463 (17%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+N+ C K D F + S GL PD TY +I CK R+ + ++
Sbjct: 268 YNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLE 327
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
++ P A + ++I G + + EA L + + G P+V YN ++ L +
Sbjct: 328 QNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVE 387
Query: 140 VALNLFEEMASGN----GEFGV-------EGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
AL +FEEM + + EG ++ A E+ M+ + P+V+T +I
Sbjct: 388 EALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMID 447
Query: 189 GFCYANDWNEAKCLLIEMMDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
C A EA C + E MD V PN VTF+ ++D L K G++D+A L + M+ G
Sbjct: 448 RLCKAQKLEEA-CSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHV 506
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT----------VF----------- 286
P A VY +L+ F GR +++ M GC+ VF
Sbjct: 507 PGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRAL 566
Query: 287 --------------SYSILI-----------------------------------NGYCK 297
SYSILI +G+CK
Sbjct: 567 FREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCK 626
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+ ++ A L EM KG P VV Y ++ L +I +++ A+ LF+E + +G+ +
Sbjct: 627 SGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVV 686
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Y + IDG K I EA + L ++ +NCL+D L
Sbjct: 687 YSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 729
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 177/390 (45%), Gaps = 19/390 (4%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNIL---FGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 57
+ +++ ML+ P + +++ F C K + ++K + TG PDL N
Sbjct: 494 YSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGH----KIYKEMVHTGCSPDLTLINT 549
Query: 58 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 117
++C K G G + I F P+A +++ LI GL E LF ++ G
Sbjct: 550 YMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQG 609
Query: 118 CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE-----FG--VEGF-----VDKAK 165
C + YN +I+G ++G A L EEM +G ++G +D+A
Sbjct: 610 CVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAY 669
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
LF + K I +VV Y+S+I GF +EA ++ E+M +G+ PNV T+N ++D L
Sbjct: 670 MLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 729
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
K +++EA M + PN Y+ L++G C + N+A + M+ +G
Sbjct: 730 VKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNT 789
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
+Y+ +I+G K I A L+ + G PD YN + L ++ A+ LF+E
Sbjct: 790 ITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEE 849
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ G T T +D L K + +A
Sbjct: 850 TRLKGCNIHTKTCVVLLDALHKAECLEQAA 879
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 164/396 (41%), Gaps = 35/396 (8%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFK---RLNSTGLFPDLYTYNILINCFCK 64
L +P P ++ G L + K +T ++ F+ + P+ YN L+ +
Sbjct: 86 LGEKPLP------ELVIGVLKRLKDANTAVNYFQWAEKQTEKVHCPE--AYNSLLMVMAR 137
Query: 65 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFT 124
H +L + S F P++ L+ ++ EA + +R F P
Sbjct: 138 NTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSA 197
Query: 125 YNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
Y LI L L LF +M E G E +V +T
Sbjct: 198 YTILIGALSEVREPDPMLILFHQMQ----ELGYE-------------------VNVHLFT 234
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
++IR F + A LL EM + ++V +NV +D K GK+D + + M
Sbjct: 235 TLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSH 294
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G+ P+ Y +++ C R++ A ELF +E ++Y+ +I GY + + A
Sbjct: 295 GLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEA 354
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L +KG P V+ YN + L + +VE A ++F+EM+RD V + TY ID
Sbjct: 355 YGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDM 413
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LC+ + A+E+ + ++ N +ID L
Sbjct: 414 LCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRL 449
>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
Length = 671
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 193/411 (46%), Gaps = 15/411 (3%)
Query: 5 DYMLNMRPSPPPVC--SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
D +L MR P+C + N + + + +F + G+ PD ++ L+
Sbjct: 132 DMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVC 191
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ G+V +L + R F+ + T T +++ LC + R + + F ++ G PNV
Sbjct: 192 CREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNV 251
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQ 170
Y I+GL + + A ++ EEM + V G+ ++A LFL+
Sbjct: 252 VNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLK 311
Query: 171 M-KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+ K + P+V TYT +I G+C A+ LL+ M++QG++PN T+ ++ CK G
Sbjct: 312 LIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGG 371
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
D A L++ M Q G PN + YN ++DGFC G++ A ++ S G +Y+
Sbjct: 372 SFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYT 431
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
ILI +CK I AL L+ M+ G PD+ Y +L + Q+E + K FD+
Sbjct: 432 ILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMI 491
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G+ TY + I G CK A+ +F + C D Y LI GL
Sbjct: 492 GLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGL 542
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 193/390 (49%), Gaps = 16/390 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P SF L + + V +L + G D T +++ C+ GR
Sbjct: 179 PDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEF 238
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R+L + PN V +T+ I GLC + +A + ++ G +PNV+T+ TLI+GL +
Sbjct: 239 FRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCK 298
Query: 135 TGHTIVALNLFEEMASGN-------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
G T A LF ++ + G + EG + +A+ L ++M ++ + P+
Sbjct: 299 IGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTN 358
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT++I G C ++ A L+ +M +G PN+ T+N ++D CK GK+ EA ++L +
Sbjct: 359 TYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMA 418
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
G++ + Y L+ C G + A +LF M GC + +Y+ LI+ YC+ +++
Sbjct: 419 TSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQM 478
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E + + + L G+ P Y ++ ++ + A ++F+ M ++G AD+ TY
Sbjct: 479 EESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGAL 538
Query: 362 IDGLCKNSYIVEAVELFRTL---RILKCEL 388
I GLCK S + EA L+ + R++ CE+
Sbjct: 539 ISGLCKESRLEEAKALYEGMLDKRLVPCEV 568
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 158/372 (42%), Gaps = 59/372 (15%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
+PP V ++ L K ++ + + + GL P++YT+ LI+ CK+G F
Sbjct: 247 TPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAF 306
Query: 73 VVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
+ ++++S + PN T+T +I G C E ++ A L ++ G +PN TY TLI G
Sbjct: 307 RLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGG 366
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
+ G D+A EL +MK E P++ TY +VI GFC
Sbjct: 367 HCKGGS-----------------------FDRAFELMNKMKQEGFLPNIYTYNAVIDGFC 403
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG---------------------- 229
EA +L QG++ + +T+ +++ E CK G
Sbjct: 404 KKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIE 463
Query: 230 -------------KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
+M+E+ + D + IG+ P Y +++ G+C GR A +F M
Sbjct: 464 AYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERM 523
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
GC +Y LI+G CK +E A +LY ML K + P V TL +
Sbjct: 524 VQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKT 583
Query: 337 ERAFKLFDEMQR 348
A + D + +
Sbjct: 584 SIAVSVLDRLDK 595
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 145/309 (46%), Gaps = 13/309 (4%)
Query: 102 RIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG-----NGEFG 156
R+ EAA + ++R G V T N ++ TG + A +F+ M F
Sbjct: 126 RLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFR 185
Query: 157 V-------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
EG V++ L M + D T T V+R C + + M++
Sbjct: 186 ALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLET 245
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
G PNVV + +D LCK + +A +L+ M+ G++PN + + TL+DG C G RA
Sbjct: 246 GTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERA 305
Query: 270 KELFVSM-ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
LF+ + +S V +Y+++I GYC+ ++ A L M+ +G+KP+ Y TL
Sbjct: 306 FRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIG 365
Query: 329 VLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
+ +RAF+L ++M+++G + +TY IDG CK I EA ++ R +
Sbjct: 366 GHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKF 425
Query: 389 DIRAYNCLI 397
D Y LI
Sbjct: 426 DKITYTILI 434
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 156/382 (40%), Gaps = 36/382 (9%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F ++ P V ++ ++ G + L R+ GL P+ TY LI
Sbjct: 306 FRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIG 365
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK G F ++ ++ + F PN T+ ++I G C + +I EA + G +
Sbjct: 366 GHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKF 425
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
+ TY LI + GH AL+LF+ M + PD+
Sbjct: 426 DKITYTILITEHCKQGHITYALDLFDRMV-----------------------ENGCCPDI 462
Query: 181 VTYTSVIRGFCYANDWNEA-----KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
YTS+I +C E+ KCL+I G+ P T+ ++ CK G+ A
Sbjct: 463 EAYTSLISTYCQQRQMEESQKFFDKCLMI-----GLLPTKQTYTSMIAGYCKVGRSTLAL 517
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
R+ + M+Q G ++ Y L+ G C R+ AK L+ M + L Y
Sbjct: 518 RVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEY 577
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
C+ ++ A+S+ + L K + V + + L + V+ A ++ + A D
Sbjct: 578 CRREKTSIAVSVL-DRLDK--RQQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDH 634
Query: 356 WTYRTFIDGLCKNSYIVEAVEL 377
TY FI+ +N+ A E+
Sbjct: 635 ATYTGFINSCYENNRYALASEM 656
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 116/281 (41%), Gaps = 36/281 (12%)
Query: 155 FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
FG G + +A ++ L+M+ + V T V+R + A+ + M GV P+
Sbjct: 121 FGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPD 180
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
+F ++ C+ GK++E LL M + G + ++ C GR E F
Sbjct: 181 ERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFR 240
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
M G V +Y+ I+G CK + ++ A + EM+ +G+KP+V + TL L +I
Sbjct: 241 RMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIG 300
Query: 335 QVERAFKLFDE------------------------------------MQRDGVAADTWTY 358
ERAF+LF + M G+ +T TY
Sbjct: 301 WTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTY 360
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
T I G CK A EL ++ +I YN +IDG
Sbjct: 361 TTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDG 401
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 5/217 (2%)
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
++ F A EA +++EM G+ V T N ++ + G A ++ D M + G
Sbjct: 117 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 176
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
V P+ + L+ C G+V L +M G + + ++++ C+ +
Sbjct: 177 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 236
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
+ ML G P+VV Y L + V++AF + +EM G+ + +T+ T IDGL
Sbjct: 237 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 296
Query: 366 CKNSYIVEAVELFRTLRILKC---ELDIRAYNCLIDG 399
CK + A LF L+++K + ++ Y +I G
Sbjct: 297 CKIGWTERAFRLF--LKLIKSSSYKPNVHTYTVMIGG 331
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 179/349 (51%), Gaps = 23/349 (6%)
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 110
D+Y++ I+I C+ G + F +L + F+PN V +T+LI G C + I +A LF
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQ 170
++ FG N +TY LI+GL++ G +GF E++ +
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNG------------------IKKQGF-----EMYEK 258
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M++ + P++ TY V+ C +A + EM ++GV N+VT+N ++ LC+ K
Sbjct: 259 MQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+EA++++D M + PN YNTL+DGFC G++ +A L ++S G + ++ +Y++
Sbjct: 319 ANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNV 378
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L++G+C+ + GA + EM +GIKP V Y L +E A +L M+ G
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELG 438
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ D TY I G C + EA LF+++ E + YN +I G
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILG 487
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 192/381 (50%), Gaps = 27/381 (7%)
Query: 4 FDYMLNMRP---SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
FD ++ +R SP V ++ GC K + + LF + GL + +TY +LI+
Sbjct: 183 FDLLVELREFGFSPNVVIYTTLIDGCCKKGE-IEKAKDLFFEMGKFGLVANEWTYTVLIH 241
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
K G GF + ++ PN T+ ++ LC + R +A +F ++R G
Sbjct: 242 GLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSC 301
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
N+ TYNTLI GL R EM + ++A ++ QMK INP++
Sbjct: 302 NIVTYNTLIGGLCR------------EMKA-----------NEANKVMDQMKSYVINPNL 338
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+TY ++I GFC +A L ++ +G+ P++VT+NV++ C+ G A++++
Sbjct: 339 ITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKE 398
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M + G++P+ Y L+D F + + A +L SME +G V +YS+LI+G+C +
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQ 458
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ A L+ M+ K ++P+ VIYNT+ + + RA +LF +M+ +A + +Y
Sbjct: 459 MNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSY 518
Query: 361 FIDGLCKNSYIVEAVELFRTL 381
I LCK + EA +L +
Sbjct: 519 LIRVLCKERKLKEAEDLVEKM 539
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 173/338 (51%), Gaps = 24/338 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ +L L KN +++++ G+FP+LYTYN ++N CK GR F V +
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEM 294
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ N VT+ +LI GLC E + EA + +++ + PN+ TYNTLI+G G
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKL 354
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
AL+L ++ K ++P +VTY ++ GFC D +
Sbjct: 355 GKALSLCRDL-----------------------KSRGLSPSLVTYNVLVSGFCRKGDTSG 391
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A ++ EM ++G++P+ VT+ +++D ++ M+ A +L M ++G+ P+ Y+ L+
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIH 451
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
GFC+ G++N A LF SM Y+ +I GYCK AL L+ +M K + P
Sbjct: 452 GFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAP 511
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV-AADT 355
+V Y+ L VL + +++ A L ++M G+ +DT
Sbjct: 512 NVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDT 549
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 105/218 (48%), Gaps = 1/218 (0%)
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I + + + + EM+D+G P FN ++ + + ++ +
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFN-ES 155
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+I V + + + ++ G C G + ++ +L V + G + V Y+ LI+G CK EIE
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ EM G+ + Y L LF+ ++ F+++++MQ GV + +TY +
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVM 275
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ LCK+ +A ++F +R +I YN LI GL
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGL 313
>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
Length = 378
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 182/362 (50%), Gaps = 23/362 (6%)
Query: 39 LFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 98
+FK +N G PDL N ++C K G V G + I F P+ +++ LI GL
Sbjct: 11 IFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLT 70
Query: 99 AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE 158
+ E +++F ++ G + YN +++G ++G
Sbjct: 71 KAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGK--------------------- 109
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
VDKA E +MK +++ P V TY S+I G + +EA L E +G++ NV+ +
Sbjct: 110 --VDKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVY 167
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
+ ++D K G++DEA +L+ M++ G+ PN + +N+LMD +N A F SM+
Sbjct: 168 SSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKE 227
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
M C+ ++YSILING C+ ++ A + EM +G+ P+VV Y T+ L ++ +
Sbjct: 228 MKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITD 287
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A LF+ + +G D ++ I+G+ + +EA +F R+ C ++++A L+D
Sbjct: 288 ACSLFERFKANGGIPDAASFNALIEGMSHANRAIEAYHVFEETRLRGCRINVKACISLLD 347
Query: 399 GL 400
L
Sbjct: 348 AL 349
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 172/375 (45%), Gaps = 23/375 (6%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+N R P + N C+ K + ++F+ + G PD+ +Y+ILI+ K G+
Sbjct: 15 MNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQ 74
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ + + F +A + +++ G C ++ +A +++V P V TY +
Sbjct: 75 ARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGS 134
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
+I+GL + +D+A LF + K + I +V+ Y+S+I
Sbjct: 135 IIDGLAKIDR-----------------------LDEAYMLFEEAKSKGIELNVIVYSSLI 171
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
GF +EA +L EMM +G+ PNV T+N +MD L K +++EA M ++
Sbjct: 172 DGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCS 231
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
PN + Y+ L++G C + N+A + M+ G V +Y+ +I+G K I A SL
Sbjct: 232 PNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSL 291
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
+ + G PD +N L + ++ A+ +F+E + G + + +D L K
Sbjct: 292 FERFKANGGIPDAASFNALIEGMSHANRAIEAYHVFEETRLRGCRINVKACISLLDALNK 351
Query: 368 NSYIVEAVELFRTLR 382
I +A + LR
Sbjct: 352 AECIEQAAVVGAVLR 366
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 132/244 (54%)
Query: 157 VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
+ G + ++F +M PD+ + + A D + + + ++ G P+V
Sbjct: 1 MHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVR 60
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
++++++ L K G+ E S + M Q G +A YN ++DGFC +G+V++A E M
Sbjct: 61 SYSILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEM 120
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
+ TV +Y +I+G K ++ A L+ E SKGI+ +V++Y++L ++ ++
Sbjct: 121 KVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRI 180
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
+ A+ + +EM + G+A + +T+ + +D L K I EA+ F++++ +KC + Y+ L
Sbjct: 181 DEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSIL 240
Query: 397 IDGL 400
I+GL
Sbjct: 241 INGL 244
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 191/385 (49%), Gaps = 7/385 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ + L + + LF+ + S G+ PD+YTY ILI+ FCK+G +
Sbjct: 453 PDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSW 512
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ +P+ VT+T+L+ ++ +A+ +F ++ GC PN TY+ L++GL +
Sbjct: 513 FDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCK 572
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G + A ++ +M + G + + F ++I P+VVTY ++I G C A+
Sbjct: 573 AGESQKACEVYAKMIGTSDNVGSDFY-------FEGEHTDSIAPNVVTYGALIDGLCKAH 625
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+A+ LL M G +PN + ++ ++D CK GK+D A + M + G P Y
Sbjct: 626 KVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYT 685
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L+D R++ A ++ M CT V +Y+ +I+G C+ E + AL L M +
Sbjct: 686 SLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKR 745
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G P+VV Y +L L + +V+ + +LF +M G A + TYR I+ C + EA
Sbjct: 746 GCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEA 805
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
L ++ ++ Y ++ G
Sbjct: 806 HSLLSEMKQTYWPKYVQGYCSVVQG 830
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 206/420 (49%), Gaps = 36/420 (8%)
Query: 14 PPPVCSFNILFGCLAKNKHYDT--VLSLFKR-----LNSTGLFPDLYTYNILINCFCKMG 66
PP +NI G + + + +L+L ++ L S+ + + T N C C MG
Sbjct: 376 PPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTAN-FARCLCGMG 434
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ F ++ ++R F P+ T++ +I LC ++ +A LF +++ G P+V+TY
Sbjct: 435 KFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYT 494
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDE 174
LI+ + G A + F+EM S V + V +A ++F +M D
Sbjct: 495 ILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDA 554
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM----------------DQGVQPNVVTF 218
P+ +TY++++ G C A + +A + +M+ + PNVVT+
Sbjct: 555 GCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTY 614
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
++D LCK K+ +A LLD+M G PN +Y+ L+DGFC G+++ A+E+F M
Sbjct: 615 GALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSK 674
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
G TV +Y+ LI+ K++ ++ A+ + +ML P+VV Y + L I + ++
Sbjct: 675 CGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQK 734
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A KL M++ G + TY + IDGL K+ + +++LF + C + Y LI+
Sbjct: 735 ALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLIN 794
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 192/428 (44%), Gaps = 34/428 (7%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
FD M ++ SP V ++ L K K +F R+ G P+ TY+ L++ C
Sbjct: 513 FDEMESVGCSPS-VVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLC 571
Query: 64 KMGRVSHGFVVLGRILRSC----------------FTPNAVTFTSLIKGLCAESRIMEAA 107
K G V +++ + PN VT+ +LI GLC ++++A
Sbjct: 572 KAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQ 631
Query: 108 ALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------- 160
L + GCEPN Y+ LI+G + G A +F M+ V +
Sbjct: 632 ELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAM 691
Query: 161 -----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNV 215
+D A ++ QM + + P+VVTYT++I G C + +A LL M +G PNV
Sbjct: 692 FKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNV 751
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
VT+ ++D L K+GK+D + +L MI G PN Y L++ C G ++ A L
Sbjct: 752 VTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSE 811
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
M+ V Y ++ G+ +K+ +L L E+ S G+ +Y L + +
Sbjct: 812 MKQTYWPKYVQGYCSVVQGF--SKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGR 869
Query: 336 VERAFKLFDEMQRDGVAADTW---TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
+E+A +L EM + + TY + I LC S + +A EL+ + ++ A
Sbjct: 870 LEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSA 929
Query: 393 YNCLIDGL 400
+ CLI GL
Sbjct: 930 FICLIKGL 937
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 173/411 (42%), Gaps = 52/411 (12%)
Query: 33 YDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTS 92
+D +S R+ P++ TY L+ F K ++ ++ ++ PN F S
Sbjct: 290 FDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNS 349
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI-------VALNLF 145
L+ C A L ++ GC P YN I + +G + +A ++
Sbjct: 350 LVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSIC-SGEELPSPDLLALAEKVY 408
Query: 146 EEMAS------------------GNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
EEM + G G+F DKA ++ M + PD TY+ VI
Sbjct: 409 EEMLASSCVLNKVNTANFARCLCGMGKF------DKAFQIIKLMMRKGFVPDTSTYSKVI 462
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
C A +A L EM GV P+V T+ +++D CK G +++A D M +G
Sbjct: 463 TFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCS 522
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P+ Y L+ + T +V +A ++F M GC +YS L++G CK E + A +
Sbjct: 523 PSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEV 582
Query: 308 YGEML----------------SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
Y +M+ + I P+VV Y L L + H+V A +L D M +G
Sbjct: 583 YAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGC 642
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL--DIRAYNCLIDGL 400
+ Y IDG CK + A E+F R+ KC + Y LID +
Sbjct: 643 EPNHIIYDALIDGFCKVGKLDNAQEVF--FRMSKCGYLPTVHTYTSLIDAM 691
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 164/386 (42%), Gaps = 62/386 (16%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L L K L ++S G P+ Y+ LI+ FCK+G++ + V
Sbjct: 609 PNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEV 668
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R+ + + P T+TSLI + + R+ A + +++ C PNV TY +I+GL R
Sbjct: 669 FFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCR 728
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G KA +L M+ NP+VVTYTS+I G +
Sbjct: 729 IGE-----------------------CQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSG 765
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI---------- 244
+ + L +M+ QG PN VT+ V+++ C G +DEA LL M Q
Sbjct: 766 KVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYC 825
Query: 245 -----------------------GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
G+ A VY L+D F GR+ +A EL M +
Sbjct: 826 SVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSS 885
Query: 282 THTVFS---YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
+ + S Y+ LI C ++E A LY E+ KG+ P++ + L L ++++
Sbjct: 886 SLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNE 945
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDG 364
A +L M +GV W DG
Sbjct: 946 ALQLCYSMCDEGV---NWQSNNSFDG 968
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 166/435 (38%), Gaps = 96/435 (22%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVL---- 75
N++ ++ + L RL G P TYN L+ G++ GF V
Sbjct: 175 LNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMS 234
Query: 76 ---------------------GR-------ILRSCFTPNAVTFTSLIKGLCAESRIMEAA 107
GR I R F + V T +I GL S EA
Sbjct: 235 ELGFCTDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAI 294
Query: 108 ALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKEL 167
+ ++R C PNV TY TL+ G + + K +
Sbjct: 295 SFLHRMRCNSCIPNVVTYRTLLAGFLKKKQ-----------------------LGWCKRI 331
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
M +E NP+ + S++ +C A D+ A LL M G P V +N+ + +C
Sbjct: 332 ISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICS 391
Query: 228 N-----------------------------------------GKMDEASRLLDLMIQIGV 246
GK D+A +++ LM++ G
Sbjct: 392 GEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGF 451
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+ Y+ ++ C +V +A LF M+S+G V++Y+ILI+ +CK IE A S
Sbjct: 452 VPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARS 511
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
+ EM S G P VV Y L + QV +A +F M G A +T TY +DGLC
Sbjct: 512 WFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLC 571
Query: 367 KNSYIVEAVELFRTL 381
K +A E++ +
Sbjct: 572 KAGESQKACEVYAKM 586
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 147/374 (39%), Gaps = 61/374 (16%)
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
VLGR+L +++ C +A +L+ FG P+ TYN L+ L
Sbjct: 170 VLGRLL-----------NVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLA 218
Query: 134 RTGHTIVALNLFEEMAS---GNGEFGVEGFVD------KAKELFLQMKDENINPDVVTYT 184
G + + +EM+ +F V F + + + ++ E+ D V T
Sbjct: 219 TAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCT 278
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+I G A+ ++EA L M PNVVT+ ++ K ++ R++ +M+
Sbjct: 279 QMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNE 338
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG- 303
G PN ++N+L+ +C A +L M GC Y+I I C +E+
Sbjct: 339 GCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSP 398
Query: 304 -----ALSLYGEMLS-----------------------------------KGIKPDVVIY 323
A +Y EML+ KG PD Y
Sbjct: 399 DLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTY 458
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
+ + L E +VE+AF LF EM+ GV D +TY ID CK I +A F +
Sbjct: 459 SKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMES 518
Query: 384 LKCELDIRAYNCLI 397
+ C + Y L+
Sbjct: 519 VGCSPSVVTYTALL 532
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 17/220 (7%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ R P V ++ L L K+ D L LF ++ + G P+ TY +LIN C G
Sbjct: 741 MMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAG 800
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ +L + ++ + + S+++G + + + L +L G Y
Sbjct: 801 LLDEAHSLLSEMKQTYWPKYVQGYCSVVQGF--SKKFIASLGLLEELESHGMVSIAPVYG 858
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGV---------------EGFVDKAKELFLQM 171
LI+ + G AL L +EM + + ++KA EL+ ++
Sbjct: 859 LLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEI 918
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
+ + P++ + +I+G N WNEA L M D+GV
Sbjct: 919 TRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEGV 958
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 85/220 (38%), Gaps = 13/220 (5%)
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
++R C W +A L + D G +P+ T+N ++ L G+MD R+ M ++G
Sbjct: 178 IVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELG 237
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRA-----KELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+ F C GR + A +E F ++++ CT +I+G +
Sbjct: 238 FCTDKFTVGCFAQALCKEGRWSDALVMIEREDF-KLDTVLCTQ-------MISGLMEASL 289
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ A+S M P+VV Y TL + Q+ ++ M +G + + +
Sbjct: 290 FDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNS 349
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ C A +L + C YN I +
Sbjct: 350 LVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSI 389
>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 743
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 199/401 (49%), Gaps = 20/401 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N + ++K V L + GL P+ TYN L+ +CK+G + F +
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + ++ P+ T+ LI G+C I E L ++ +P+V TYNTLI+G +
Sbjct: 298 VELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFE 357
Query: 135 TGHTIVALNLFEEMASGN----------------GEFGVEGFVDKAKELFLQMKDENINP 178
G ++ A L E+M + E E K KEL ++ +P
Sbjct: 358 LGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKEL---VEMHGFSP 414
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D+VTY ++I+ + D + A ++ EM +G++ N +T N I+D LCK K+DEA LL
Sbjct: 415 DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLL 474
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
D + G + Y TL+ G+ +V +A E++ M+ + T TV +++ LI G C +
Sbjct: 475 DSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHH 534
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+ E A+ + E+ G+ PD +N++ + + +VE+AF+ ++E + D +T
Sbjct: 535 GKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTC 594
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
++GLCK +A+ F TL I + E+D YN +I
Sbjct: 595 NILLNGLCKEGMTEKALNFFNTL-ITEREVDTVTYNTMISA 634
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 184/405 (45%), Gaps = 33/405 (8%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYD--TVLSLFKRLNSTGLFPDLYTYNILIN 60
+F M+ ++ P + +L G + + + +F + G+ D+ T+N+L+N
Sbjct: 153 VFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVN 212
Query: 61 CFCKMGRVSHGFVVLGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 119
+C G++ +L R++ P+ VT+ +++K + + R+ + L ++ G
Sbjct: 213 GYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLV 272
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPD 179
PN TYN L+ G + G A + E MK NI PD
Sbjct: 273 PNRVTYNNLVYGYCKLGSLKEAFQIVE-----------------------LMKQTNILPD 309
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
+ TY +I G C A E L+ M +QP+VVT+N ++D + G EA +L++
Sbjct: 310 LCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLME 369
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGR----VNRAKELFVSMESMGCTHTVFSYSILINGY 295
M GV+PN +N + C + + KEL +E G + + +Y LI Y
Sbjct: 370 QMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKEL---VEMHGFSPDIVTYHTLIKAY 426
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
K ++ GAL + EM KGIK + + NT+ L + +V+ A L D + G D
Sbjct: 427 LKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDE 486
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY T I G + + +A E++ ++ +K + +N LI GL
Sbjct: 487 VTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGL 531
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 190/427 (44%), Gaps = 55/427 (12%)
Query: 9 NMRPSPPPVCS-FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLY-------------- 53
N+ SPPP + F+I L +F+++ L P+L
Sbjct: 122 NLHLSPPPSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPS 181
Query: 54 ------------------------TYNILINCFCKMGRVSHGFVVLGRILRS-CFTPNAV 88
T+N+L+N +C G++ +L R++ P+ V
Sbjct: 182 SFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNV 241
Query: 89 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM 148
T+ +++K + + R+ + L ++ G PN TYN L+ G + G A + E M
Sbjct: 242 TYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301
Query: 149 ASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
N G + + EL MK + PDVVTY ++I G C+
Sbjct: 302 KQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDG-CFELGL 360
Query: 197 N-EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI-GVRPNAFVYN 254
+ EAK L+ +M + GV+PN VT N+ + LCK K +E +R + ++++ G P+ Y+
Sbjct: 361 SLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYH 420
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+ + G ++ A E+ M G + + +++ CK ++++ A +L +
Sbjct: 421 TLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKR 480
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G D V Y TL + F +VE+AF+++DEM+R + T+ + I GLC + A
Sbjct: 481 GYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELA 540
Query: 375 VELFRTL 381
+E F L
Sbjct: 541 MEKFDEL 547
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 153/330 (46%), Gaps = 25/330 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P + NI L K + + V K L G PD+ TY+ LI + K+G +S
Sbjct: 378 PNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALE 437
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
++ + + N +T +++ LC E ++ EA L G + TY TLI G +
Sbjct: 438 MMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYF 497
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
R E V+KA E++ +MK I P V T+ S+I G C+
Sbjct: 498 R-----------------------EEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHH 534
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
A E+ + G+ P+ TFN I+ CK G++++A + I+ +P+ +
Sbjct: 535 GKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTC 594
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N L++G C G +A F ++ + TV +Y+ +I+ +CK+K+++ A L EM
Sbjct: 595 NILLNGLCKEGMTEKALNFFNTLITEREVDTV-TYNTMISAFCKDKKLKEAYDLLSEMEE 653
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
K ++PD YN++ L E ++ A +L
Sbjct: 654 KRLEPDRFTYNSIITSLMEDGKLSEADELL 683
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 140/317 (44%), Gaps = 22/317 (6%)
Query: 85 PNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNL 144
P+ F + + A +F K+ +PN+ T NTL+ GL R +
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFS---- 184
Query: 145 FEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
+ A+E+F M ++ DV T+ ++ G+C +A +L
Sbjct: 185 ----------------IASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLE 228
Query: 205 EMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
M+ + V P+ VT+N I+ + K G++ + LL M + G+ PN YN L+ G+C
Sbjct: 229 RMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKL 288
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
G + A ++ M+ + +Y+ILING C I L L M S ++PDVV Y
Sbjct: 289 GSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTY 348
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL-R 382
NTL FE+ A KL ++M+ DGV + T+ + LCK E + L
Sbjct: 349 NTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVE 408
Query: 383 ILKCELDIRAYNCLIDG 399
+ DI Y+ LI
Sbjct: 409 MHGFSPDIVTYHTLIKA 425
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 133/308 (43%), Gaps = 28/308 (9%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++ M P + +++ L K L + + + G+ + T N +++ CK
Sbjct: 406 LVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKER 465
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+V +L + + + VT+ +LI G E ++ +A ++ +++ P V T+N
Sbjct: 466 KVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFN 525
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
+LI GL G T +A+ F+E+A + + PD T+ S+
Sbjct: 526 SLIGGLCHHGKTELAMEKFDELA-----------------------ESGLLPDDCTFNSI 562
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G+C +A E + +P+ T N++++ LCK G ++A + +I
Sbjct: 563 ILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLI-TER 621
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+ YNT++ FC ++ A +L ME F+Y+ +I ++ G LS
Sbjct: 622 EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMED----GKLS 677
Query: 307 LYGEMLSK 314
E+L K
Sbjct: 678 EADELLKK 685
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 117/241 (48%), Gaps = 28/241 (11%)
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQG----------VQPNV--------VTFNVIMDELC 226
SV+R + + +AK LL+ + + PN+ F++ +
Sbjct: 83 SVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYL 142
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG---FCLTGRVNRAKELFVSMESMGCTH 283
GK A ++ MI++ ++PN NTL+ G + + + A+E+F M +G +
Sbjct: 143 HAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFDDMVKIGVSL 202
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSK-GIKPDVVIYNTLFVVLFEIHQVERAFKL 342
V ++++L+NGYC ++E AL + M+S+ + PD V YNT+ + + ++ L
Sbjct: 203 DVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDL 262
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA---VELFRTLRILKCELDIRAYNCLIDG 399
+M+R+G+ + TY + G CK + EA VEL + IL D+ YN LI+G
Sbjct: 263 LLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILP---DLCTYNILING 319
Query: 400 L 400
+
Sbjct: 320 V 320
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 89/225 (39%), Gaps = 35/225 (15%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F ++D M ++ +P V +FN L G L + + + F L +GL PD T+N +I
Sbjct: 506 FEMWDEMKRIKITPT-VTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIIL 564
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPN---------------------------------- 86
+CK GRV F ++ F P+
Sbjct: 565 GYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITEREVD 624
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
VT+ ++I C + ++ EA L +++ EP+ FTYN++I L G A L +
Sbjct: 625 TVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLK 684
Query: 147 EMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
+ + G ++ K E + + + Y+ VI C
Sbjct: 685 KFSGKFGSMKRNLHLETEKNPATSESKEELKTEAIAYSDVINELC 729
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 205/433 (47%), Gaps = 47/433 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + NI+ L K + + +F+ + G PD TY LI+ K G+V + +
Sbjct: 421 PNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRL 480
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN------------- 121
++L + N V +TSLI+ R + +F +L GC+P+
Sbjct: 481 FEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFK 540
Query: 122 ----------------------VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG--- 156
V +Y+ LI+GL + G N+F M
Sbjct: 541 AGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARA 600
Query: 157 ----VEGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
V+GF V KA E+ +MK++ + P V TY +++ G + +EA L E
Sbjct: 601 YNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK 660
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+G++ NVV ++ ++D K G++DEA +L+ M++ G+ PN + +N+L+D +N
Sbjct: 661 SKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEIN 720
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A F SM+ M C ++YSILING C+ ++ A + +M +G+ P+VV Y T+
Sbjct: 721 EALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMI 780
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
L ++ + A+ LF+ + +G D ++ I+G+ + +EA ++F R+ C
Sbjct: 781 SGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCR 840
Query: 388 LDIRAYNCLIDGL 400
++I++ L+D L
Sbjct: 841 INIKSCISLLDAL 853
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 181/392 (46%), Gaps = 13/392 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F L LA+ L+L + + L PD+ YN+ I+CF K G V + +
Sbjct: 217 FTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELK 276
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
P+ V++TS+I LC R+ EA LF ++ P + YNT+I G G
Sbjct: 277 AQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFE 336
Query: 140 VALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSVI 187
A L E + V F VD+A LF MK ++ P+ TY +I
Sbjct: 337 DAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNIII 395
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
C EA +L EM + PN++T N+++D LCK K++EA ++ + Q G
Sbjct: 396 DMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCN 455
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P+ Y +L+DG G+V+ A LF M G Y+ LI + + E +
Sbjct: 456 PDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKI 515
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
+ E++ +G KPD+ + NT +F+ +VE+ +F++++ G D +Y I GL K
Sbjct: 516 FKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTK 575
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
E +F ++ LD RAYN ++DG
Sbjct: 576 AGQARETSNIFHAMKQQGFALDARAYNAVVDG 607
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 186/431 (43%), Gaps = 46/431 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +N+ C K + D F L + GL PD +Y +I CK GR+ +
Sbjct: 247 PDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEEL 306
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ P A + ++I G + R +A L +LR GC P+V ++N+++ L +
Sbjct: 307 FAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGK 366
Query: 135 TGHTIVALNLFEEM---ASGNGE--------FGVEGFVDKAKELFLQMKDENI------- 176
AL+LFE M A N + G V++A + +M+ ++
Sbjct: 367 KRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTV 426
Query: 177 ----------------------------NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD 208
NPD VTY S+I G +EA L +M+D
Sbjct: 427 NIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLD 486
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
G N V + ++ +G+ ++ ++ +I+ G +P+ + NT MD G V +
Sbjct: 487 AGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEK 546
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
+ +F + S G V SYSILI+G K + +++ M +G D YN +
Sbjct: 547 GRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVD 606
Query: 329 VLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
+ +V +A+++ +EM+ V TY +DGL K + EA LF + EL
Sbjct: 607 GFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIEL 666
Query: 389 DIRAYNCLIDG 399
++ Y+ LIDG
Sbjct: 667 NVVLYSSLIDG 677
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 187/394 (47%), Gaps = 13/394 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ +F+ ML+ + PV +++ + D +FK L G PDL N ++
Sbjct: 478 YRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDG-HKIFKELIRRGCKPDLTLLNTYMD 536
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C K G V G ++ I F P+ +++ LI GL + E + +F ++ G
Sbjct: 537 CVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFAL 596
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASG-----NGEFG--VEGF-----VDKAKELF 168
+ YN +++G ++G A + EEM +G V+G +D+A LF
Sbjct: 597 DARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLF 656
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+ K + I +VV Y+S+I GF +EA +L EMM +G+ PNV T+N ++D L K
Sbjct: 657 EEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKA 716
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
+++EA M ++ PN + Y+ L++G C + N+A + M+ G V +Y
Sbjct: 717 EEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTY 776
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ +I+G K I A SL+ + G PD +N L + ++ A+++F+E +
Sbjct: 777 TTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRL 836
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
G + + + +D L K+ + +A + LR
Sbjct: 837 RGCRINIKSCISLLDALNKSECLEQAAIVGAVLR 870
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 34/273 (12%)
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
++A EL QM++ V +T+++R +A L+ E+ ++P++V +NV
Sbjct: 196 ERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVC 255
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
+D K G +D A + + G++P+ Y +++ C GR+ A+ELF ME+
Sbjct: 256 IDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERS 315
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF------------VV 329
++Y+ +I GY E A L + +G P VV +N++ +
Sbjct: 316 VPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALS 375
Query: 330 LFEIHQ----------------------VERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
LFE+ + VE A+++ DEM+ + + T +D LCK
Sbjct: 376 LFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCK 435
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ EA ++F + C D Y LIDGL
Sbjct: 436 ARKLEEAYKIFESASQRGCNPDCVTYCSLIDGL 468
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 83/175 (47%)
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
L + ++D+A + +M ++ RP Y L+ R RA EL M+ +G
Sbjct: 154 LVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVG 213
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
V ++ L+ + ++ AL+L E+ ++PD+V+YN + V+ A+K F
Sbjct: 214 VHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFH 273
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
E++ G+ D +Y + I LCK + EA ELF + + AYN +I G
Sbjct: 274 ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMG 328
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 199/395 (50%), Gaps = 22/395 (5%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ + LAKNK ++L +++ + G P + TYN L+N CKMGR+ +L +I
Sbjct: 261 TYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 320
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ + TP+ VT+TSLI GL E R EA LF ++ G + Y LI GL +TG
Sbjct: 321 VDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKI 380
Query: 139 IVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
A ++++ M S G + A +F M+ + P+ V Y+++
Sbjct: 381 PQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSAL 440
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G C A + A +L +M P+ +T+N+++D LCK+G ++ A D M++ G
Sbjct: 441 IHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGC 500
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+P+ + YN L+ G C G + A + M S + F YS L++G CK+ ++EG
Sbjct: 501 KPDVYTYNILISGLCKAGNTDAACGVLDDMSS-----SRFVYSSLVDGLCKSGKLEGGCM 555
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L+ EM G+ + L L + ++V+ A LF+ ++++G+ + Y + I L
Sbjct: 556 LFHEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALI 613
Query: 367 KNSYIVEAVELFRTL-RILKCELDIRAYNCLIDGL 400
K+ + E +++ + R K D YN L++G+
Sbjct: 614 KSGKVNEGQAVYQEMTRWWK--PDRVTYNALLNGM 646
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 176/371 (47%), Gaps = 28/371 (7%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P +F+IL L K SL + + G D++TY ++N K ++
Sbjct: 218 RSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQE 277
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
++ +I + TP T+ +L+ GLC R+ EA L K+ GC P+V TY +LI+
Sbjct: 278 AVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLID 337
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
GL + + A LF+EMAS + D V YT++IRG
Sbjct: 338 GLGKEKRSFEAYKLFKEMAS-----------------------RGLALDTVCYTALIRGL 374
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
+A + M G P+VVT + ++D L K G++ A R+ M G+ PN
Sbjct: 375 LQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNE 434
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
VY+ L+ G C +++ A E+ M+ CT +Y+ILI+G CK+ ++E A + + E
Sbjct: 435 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDE 494
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
ML G KPDV YN L L + + A + D+M ++ + Y + +DGLCK+
Sbjct: 495 MLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDM-----SSSRFVYSSLVDGLCKSGK 549
Query: 371 IVEAVELFRTL 381
+ LF +
Sbjct: 550 LEGGCMLFHEM 560
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 188/398 (47%), Gaps = 16/398 (4%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V + N L A+ K + +L K +T PD+ T+N+LI +C F V+
Sbjct: 119 VHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVI- 177
Query: 77 RILRSCF--TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R + F P+ T ++ GLC +++ A F +R + T++ LINGL +
Sbjct: 178 REMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVR-RSMPVSAATFSILINGLVK 236
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
G I A +L +E + + + + +A L ++ P + T
Sbjct: 237 AGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIAT 296
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++ G C EA LL +++D G P+VVT+ ++D L K + EA +L M
Sbjct: 297 YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA 356
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ + Y L+ G TG++ +A ++ +M S GC V + S +I+G K I
Sbjct: 357 SRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIG 416
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ ++ M ++G+ P+ V+Y+ L L + +++ A ++ +M++ DT TY I
Sbjct: 417 AAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILI 476
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
DGLCK+ + A F + C+ D+ YN LI GL
Sbjct: 477 DGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGL 514
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 184/392 (46%), Gaps = 17/392 (4%)
Query: 23 LFGCLAKNKHYDTVLSLFKRLNST--GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
+F CL K D LF+ L+S G ++T N L++ F + R +L L
Sbjct: 91 IFQCL---KDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELA 147
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV-FGCEPNVFTYNTLINGLYRTGHTI 139
+ F P+ T+ LI G C EA A+ ++ FG P++ T+N +++GL ++G +
Sbjct: 148 TIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVL 207
Query: 140 VALNLFE----EMASGNGEFGV-------EGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
A++ FE M F + G + +A L + D+ TYT+++
Sbjct: 208 AAMDHFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVN 267
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
EA L+ ++ G P + T+N +++ LCK G+++EA LL ++ G P
Sbjct: 268 WLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP 327
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
+ Y +L+DG R A +LF M S G Y+ LI G + +I A S+Y
Sbjct: 328 DVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVY 387
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
M S G PDVV +T+ L + ++ A ++F M+ G+A + Y I GLCK
Sbjct: 388 KTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 447
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ A+E+ ++ C D YN LIDGL
Sbjct: 448 RKMDCALEMLAQMKKAFCTPDTITYNILIDGL 479
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 187/401 (46%), Gaps = 23/401 (5%)
Query: 15 PPVCSFNILFG--CLAKNKHYDTVLSLFKRLNST-GLFPDLYTYNILINCFCKMGRVSHG 71
P V ++N+L CLA+ + ++ + + G+ P L T+N++++ CK G+V
Sbjct: 152 PDVETWNVLITGYCLAREP--EEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAA 209
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
+ RS +A TF+ LI GL +++A +L + GC ++ TY ++N
Sbjct: 210 MDHFEAVRRS-MPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNW 268
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKDENINPD 179
L + A+ L E++ + + G +++A +L ++ D PD
Sbjct: 269 LAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPD 328
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
VVTYTS+I G EA L EM +G+ + V + ++ L + GK+ +AS +
Sbjct: 329 VVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYK 388
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M G P+ +T++DG GR+ A +F SME+ G YS LI+G CK +
Sbjct: 389 TMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR 448
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
+++ AL + +M PD + YN L L + VE A FDEM G D +TY
Sbjct: 449 KMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYN 508
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I GLCK A + + + Y+ L+DGL
Sbjct: 509 ILISGLCKAGNTDAACGVLDDMSSSRF-----VYSSLVDGL 544
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 149/312 (47%), Gaps = 31/312 (9%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + + + L+K + +FK + + GL P+ Y+ LI+ CK ++ +
Sbjct: 397 PDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM 456
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ ++ TP+ +T+ LI GLC + A A F ++ GC+P+V+TYN LI+GL +
Sbjct: 457 LAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCK 516
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G+T A + ++M+S FV Y+S++ G C +
Sbjct: 517 AGNTDAACGVLDDMSSSR-------FV---------------------YSSLVDGLCKSG 548
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
E C+L M++ N T ++ LCK ++DEA L + + + G+ P+ + YN
Sbjct: 549 KL-EGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYN 606
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+++ +G+VN + ++ M V +Y+ L+NG ++ A Y EM +
Sbjct: 607 SIISALIKSGKVNEGQAVYQEMTRWWKPDRV-TYNALLNGMIGANRMDRAHYYYLEMTGR 665
Query: 315 GIKPDVVIYNTL 326
G P V I + L
Sbjct: 666 GYVPPVSILHKL 677
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 114/278 (41%), Gaps = 32/278 (11%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF M R P ++ L L K + D L + ++ PD TYNILI+
Sbjct: 421 IFKSM-EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGL 479
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G V +L + P+ T+ LI GLC A + + +
Sbjct: 480 CKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDM-----SSSR 534
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
F Y++L++GL ++G LF EM GV + T
Sbjct: 535 FVYSSLVDGLCKSGKLEGGCMLFHEMERS----GV--------------------ANSQT 570
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
T +I C AN +EA L + +G+ P+ +N I+ L K+GK++E + M
Sbjct: 571 RTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEMT 629
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+ +P+ YN L++G R++RA ++ M G
Sbjct: 630 RWW-KPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRG 666
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 103/258 (39%), Gaps = 56/258 (21%)
Query: 2 CIFDYMLNMRPS--PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILI 59
C + + M+ + P ++NIL L K+ + + F + G PD+YTYNILI
Sbjct: 452 CALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILI 511
Query: 60 NCFCKMGRVSHGFVVL--------------------GRILRSCF---------TPNAVTF 90
+ CK G VL G++ C N+ T
Sbjct: 512 SGLCKAGNTDAACGVLDDMSSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTR 571
Query: 91 TSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS 150
T LI LC +R+ EA +LF +R G P+ + YN++I+ L ++G +++EM
Sbjct: 572 TRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEMTR 630
Query: 151 GNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG 210
PD VTY +++ G AN + A +EM +G
Sbjct: 631 W------------------------WKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRG 666
Query: 211 VQPNVVTFNVIMDELCKN 228
P V + + D+ K+
Sbjct: 667 YVPPVSILHKLADDRLKD 684
>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
Length = 715
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 181/376 (48%), Gaps = 13/376 (3%)
Query: 38 SLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 97
++F + G+ PD +Y ++ +C+MGR+S L ++R F + T T +I
Sbjct: 217 NVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTF 276
Query: 98 CAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV 157
C + F K G +PN+ + +LINGL + G A + EEM + V
Sbjct: 277 CEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNV 336
Query: 158 ------------EGFVDKAKELFLQM-KDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
+G+ +KA LFL++ + ++ P+V TYTS+I G+C + N A+ LL
Sbjct: 337 YTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLS 396
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
M +QG+ PN T+ ++D K G ++A L+DLM + G N F YN +D C G
Sbjct: 397 RMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKG 456
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
R A +L +G +Y+ILI+ C+ + AL + +M G++PD+ YN
Sbjct: 457 RFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYN 516
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
TL ++E + KLF E G+ TY + I G C++ + A++ F +
Sbjct: 517 TLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDH 576
Query: 385 KCELDIRAYNCLIDGL 400
C D Y LI GL
Sbjct: 577 GCTPDSLTYGALISGL 592
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 177/392 (45%), Gaps = 14/392 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M +R P S+ ++ + K + G D T ++I+ F
Sbjct: 218 VFDEM-RVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTF 276
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ G S F + + PN + FTSLI GLC I +A + ++ G +PNV
Sbjct: 277 CEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNV 336
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFL 169
+T+ LI+GL + G T A LF ++ + + E +++A+ L
Sbjct: 337 YTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLS 396
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+MK++ + P+ TYT +I G A ++ +A L+ M +G N+ T+N +D LCK G
Sbjct: 397 RMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKG 456
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+ EA +LL ++G++ + Y L+ C A F M G + +Y+
Sbjct: 457 RFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYN 516
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
LI + + + +E + L+ E + G+ P Y ++ V A K F+ M
Sbjct: 517 TLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDH 576
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
G D+ TY I GLCK S + EA +L+ +
Sbjct: 577 GCTPDSLTYGALISGLCKESKLDEACQLYEAM 608
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 175/387 (45%), Gaps = 27/387 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +F L L K + + + G P++YT+ LI+ CK G F +
Sbjct: 299 PNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRL 358
Query: 75 LGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+++RS + PN T+TS+I G C E ++ A L ++++ G PN TY LI+G
Sbjct: 359 FLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHS 418
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ G+ +KA EL M E + ++ TY + I C
Sbjct: 419 KAGN-----------------------FEKAYELMDLMGKEGFSANIFTYNAFIDSLCKK 455
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+ EA LL + G+Q + VT+ +++ ELC+ EA M + GV+P+ Y
Sbjct: 456 GRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTY 515
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
NTL+ F R+ +++LF +G T +Y+ +I GYC+++ + AL + M
Sbjct: 516 NTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSD 575
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
G PD + Y L L + +++ A +L++ M G++ T T CK
Sbjct: 576 HGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSAT 635
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A+ + L L +L IR N LI L
Sbjct: 636 AMVI---LERLDKKLWIRTVNTLIRKL 659
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 142/333 (42%), Gaps = 15/333 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + K + L R+ GL P+ TY LI+ K G + +
Sbjct: 370 PNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYEL 429
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + + F+ N T+ + I LC + R +EA L K G + + TY LI+ L R
Sbjct: 430 MDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCR 489
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
T AL F +M F + ++++++LF + + P T
Sbjct: 490 RADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKET 549
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YTS+I G+C + + A M D G P+ +T+ ++ LCK K+DEA +L + M+
Sbjct: 550 YTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMV 609
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ P TL +C + + + V +E + + + + LI C +++
Sbjct: 610 DKGLSPCEVTRLTLAYEYC---KQDDSATAMVILERLDKKLWIRTVNTLIRKLCSERKVG 666
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
A+ + ++L K D V +E ++
Sbjct: 667 MAVLFFHKLLDKDQNVDRVTLTAFTTACYESNK 699
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 125/284 (44%), Gaps = 39/284 (13%)
Query: 153 GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
GE G+ G+ A+ +F +M+ + PD V+Y + +C ++ L +M+ +G
Sbjct: 207 GEMGLVGY---AENVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFV 263
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
+ T +++ C+ G D +++G++PN + +L++G C G + +A E+
Sbjct: 264 VDNATCTLMISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEM 323
Query: 273 FVSMESMGC-----THT-------------------------------VFSYSILINGYC 296
M G THT V +Y+ +I+GYC
Sbjct: 324 LEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYC 383
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K ++ A L M +G+ P+ Y L + E+A++L D M ++G +A+ +
Sbjct: 384 KEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIF 443
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY FID LCK +EA +L + L + D Y LI L
Sbjct: 444 TYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISEL 487
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 102/215 (47%), Gaps = 1/215 (0%)
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
++R F + EA ++IEM + G+ V T N + + G + A + D M G
Sbjct: 167 MVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRG 226
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
V P++ Y + +C GR++ M G + +++I+ +C+
Sbjct: 227 VCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVF 286
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
+ + + G+KP+++ + +L L + +++AF++ +EM + G + +T+ IDGL
Sbjct: 287 WYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGL 346
Query: 366 CKNSYIVEAVELF-RTLRILKCELDIRAYNCLIDG 399
CK + +A LF + +R + ++ Y +I G
Sbjct: 347 CKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHG 381
>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 203/413 (49%), Gaps = 20/413 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
I+ MLN SP V S +IL +N LF ++ G P + TY+ LI F
Sbjct: 399 IYKRMLNEGISPN-VVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGF 457
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G + GF + +++ P+ + ++ LI GLC + + +A F + G PNV
Sbjct: 458 CKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNV 517
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMA---------------SGNGEFGVEGFVDKAKEL 167
FT NTL++ R + A+ ++ M G +FG VD+A L
Sbjct: 518 FTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGR---VDEALML 574
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
F QM ++ PDV+TY ++I G C + C+ M V P++ +NV+++ +
Sbjct: 575 FFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSR 634
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
G ++ A L +++ G +P+ F +NT++ +C R++ A +LF M S +
Sbjct: 635 EGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAIT 694
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV-ERAFKLFDEM 346
++ILI+ +C+ ++ A+ ++ +ML +G +P++V Y+ L F+ + E KL++EM
Sbjct: 695 FTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEM 754
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ +A + +Y IDGLCK + EA FR D+ AY LI G
Sbjct: 755 LENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRG 807
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 183/431 (42%), Gaps = 59/431 (13%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ ++ + P P V +F+ L K + D LF + G+ PDL Y+ILI+
Sbjct: 295 FNMVVRIGPKPN-VVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLF 353
Query: 64 KMGRVSHG-------------------------FVVLG----------RILRSCFTPNAV 88
K GR+ G +V +G R+L +PN V
Sbjct: 354 KAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVV 413
Query: 89 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM 148
+ + LIKG C RI+EA LF ++ G EP++ TY+ LI G ++G+ L+E+M
Sbjct: 414 SCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDM 473
Query: 149 ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD 208
E PD + Y+ +I G C +A + ++
Sbjct: 474 IKKRCE-----------------------PDTIVYSVLINGLCKQGLVGDALRFFFQAVN 510
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
+G+ PNV T N ++D C+ + A ++ LM + ++ + Y L+ G GRV+
Sbjct: 511 RGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDE 570
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
A LF M V +Y LI+G CK K+ L ++ M + PD+ IYN L
Sbjct: 571 ALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLIN 630
Query: 329 VLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
+ +E A LF + G D +T+ T I C + +AV+LF + +
Sbjct: 631 MHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRP 690
Query: 389 DIRAYNCLIDG 399
+ + LID
Sbjct: 691 NAITFTILIDA 701
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 178/378 (47%), Gaps = 23/378 (6%)
Query: 22 ILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRS 81
+L G L + + ++ + L S Y ++N F G V G +++
Sbjct: 207 LLLGSLIDSHCVEVIVDKYGELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQG 266
Query: 82 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVA 141
F + +T ++KG+ ++ I A F + G +PNV T++TLI+ + G+ A
Sbjct: 267 GFGLDIITCNKILKGIWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKA 326
Query: 142 LNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
LF+ MA GNG + PD++ Y+ +I G A + +
Sbjct: 327 FVLFDVMA-GNG----------------------VTPDLIVYSILIDGLFKAGRLEDGQR 363
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
LL+ +D+G++ +VV F+ MD K G + ++ M+ G+ PN + L+ GFC
Sbjct: 364 LLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFC 423
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
GR+ A LFV + +G ++ +YS LI G+CK+ + LY +M+ K +PD +
Sbjct: 424 QNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTI 483
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+Y+ L L + V A + F + G++ + +T T +D C+ IV A++++ +
Sbjct: 484 VYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLM 543
Query: 382 RILKCELDIRAYNCLIDG 399
+L + D Y LI G
Sbjct: 544 GMLNIKADTVTYTILIKG 561
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 180/374 (48%), Gaps = 12/374 (3%)
Query: 37 LSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 96
L K L G D+ T N ++ + ++R PN VTF++LI
Sbjct: 257 LRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDA 316
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT-------IVALNLFEEM- 148
C E + +A LF + G P++ Y+ LI+GL++ G +VAL+ ++
Sbjct: 317 YCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLD 376
Query: 149 ----ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
+S + G + + +++ +M +E I+P+VV+ + +I+GFC EA L +
Sbjct: 377 VVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFV 436
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
+++ G +P+++T++ ++ CK+G + + L + MI+ P+ VY+ L++G C G
Sbjct: 437 QILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQG 496
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
V A F + G + VF+ + L++ +C+ K I GA+ +Y M IK D V Y
Sbjct: 497 LVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYT 556
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
L + +V+ A LF +M + D TY T IDGLCK + +F +
Sbjct: 557 ILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKN 616
Query: 385 KCELDIRAYNCLID 398
DI YN LI+
Sbjct: 617 AVAPDIAIYNVLIN 630
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 179/374 (47%), Gaps = 14/374 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +++ M+ R P + +++L L K L F + + GL P+++T N L++
Sbjct: 467 FYLYEDMIKKRCEPDTIV-YSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLD 525
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
FC++ + V + + VT+T LIKG R+ EA LF ++ +P
Sbjct: 526 SFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKP 585
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEM-----ASGNGEFGV-------EGFVDKAKELF 168
+V TY TLI+GL + + L +F+ M A + V EG ++ A LF
Sbjct: 586 DVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLF 645
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+ + + PDV T+ ++I +C ++A L +M + ++PN +TF +++D C+
Sbjct: 646 VHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCRE 705
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDG-FCLTGRVNRAKELFVSMESMGCTHTVFS 287
G+MD+A + M++ G PN Y+ L+ G F + +L+ M + S
Sbjct: 706 GRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVS 765
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
YSILI+G CK ++ A + L K + PDV+ Y L ++ ++ A L+D M
Sbjct: 766 YSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNML 825
Query: 348 RDGVAADTWTYRTF 361
+ + D + RT
Sbjct: 826 LNRLTPDRFLERTL 839
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 160/342 (46%), Gaps = 18/342 (5%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V + N L + K + ++ + + D TY ILI + GRV
Sbjct: 511 RGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDE 570
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
++ ++L+ F P+ +T+ +LI GLC + +F + P++ YN LIN
Sbjct: 571 ALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLIN 630
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINP 178
R GH AL LF + + V F +D A +LF +M E + P
Sbjct: 631 MHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRP 690
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS-RL 237
+ +T+T +I FC ++A + +M+++G +PN+VT++ ++ K+ M E+ +L
Sbjct: 691 NAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKL 750
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
+ M++ + PN Y+ L+DG C G + A F V +Y+ILI GYCK
Sbjct: 751 YNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCK 810
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
+ A+ LY ML + PD + TL E +Q+++A
Sbjct: 811 VGRLTEAMMLYDNMLLNRLTPDRFLERTL-----EEYQLKKA 847
>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 198/401 (49%), Gaps = 20/401 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N + ++K + L + GL P+ TYN L+ +CK+G + F +
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + ++ P+ T+ LI GLC + E L ++ +P+V TYNTLI+G +
Sbjct: 298 VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFE 357
Query: 135 TGHTIVALNLFEEMASGN----------------GEFGVEGFVDKAKELFLQMKDENINP 178
G ++ A L E+M + E E K KEL + +P
Sbjct: 358 LGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKEL---VDMHGFSP 414
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D+VTY ++I+ + D + A ++ EM +G++ N +T N I+D LCK K+DEA LL
Sbjct: 415 DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLL 474
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
+ + G + Y TL+ GF +V +A E++ M+ + T TV +++ LI G C +
Sbjct: 475 NSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHH 534
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+ E A+ + E+ G+ PD +N++ + + +VE+AF+ ++E + D +T
Sbjct: 535 GKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTC 594
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
++GLCK +A+ F TL I + E+D YN +I
Sbjct: 595 NILLNGLCKEGMTEKALNFFNTL-IEEREVDTVTYNTMISA 634
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 180/398 (45%), Gaps = 31/398 (7%)
Query: 9 NMRPSPPPVCS-FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG- 66
N+ SPPP + F+I L +F+++ L P+L T N L+ +
Sbjct: 122 NLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPS 181
Query: 67 --RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPNVF 123
+S V +++ + N TF L+ G C E ++ +A + ++ F P+
Sbjct: 182 SFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNV 241
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
TYNT++ + + G + KEL L MK + P+ VTY
Sbjct: 242 TYNTILKAMSKKGR-----------------------LSDLKELLLDMKKNGLVPNRVTY 278
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+++ G+C EA ++E+M Q V P++ T+N++++ LC G M E L+D M
Sbjct: 279 NNLVYGYCKLGSLKEA-FQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMK 337
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ ++P+ YNTL+DG G A++L ME+ G +++I + CK ++ E
Sbjct: 338 SLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKRE 397
Query: 303 GALSLYGEMLS-KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E++ G PD+V Y+TL ++ + A ++ EM + G+ +T T T
Sbjct: 398 AVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTI 457
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+D LCK + EA L + +D Y LI G
Sbjct: 458 LDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMG 495
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 154/367 (41%), Gaps = 36/367 (9%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
+++M P + +++ L K L + + + G+ + T N +++ CK
Sbjct: 406 LVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKER 465
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
++ +L + F + VT+ +LI G E ++ +A ++ +++ P V T+N
Sbjct: 466 KLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFN 525
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
+LI GL G T +A+ F+E+A + + PD T+ S+
Sbjct: 526 SLIGGLCHHGKTELAMEKFDELA-----------------------ESGLLPDDSTFNSI 562
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G+C +A E + +P+ T N++++ LCK G ++A + +I+
Sbjct: 563 ILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIE-ER 621
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+ YNT++ FC ++ A +L ME G F+Y+ I+ ++ G LS
Sbjct: 622 EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMED----GKLS 677
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
E+L K ++ F + QVE ++ + + Y ID LC
Sbjct: 678 ETDELLKK--------FSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELC 729
Query: 367 KNSYIVE 373
+ E
Sbjct: 730 SRGRLKE 736
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 96/226 (42%), Gaps = 9/226 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FN L G L + + + F L +GL PD T+N +I +CK GRV F
Sbjct: 519 PTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEF 578
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ F P+ T L+ GLC E +A F L + E + TYNT+I+ +
Sbjct: 579 YNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL-IEEREVDTVTYNTMISAFCK 637
Query: 135 TGHTIVALNLFEEMASGNGE---FGVEGFVDKAKEL-FLQMKDENINPDVVTYTSVIRGF 190
A +L EM E F F+ E L DE + + S+ R
Sbjct: 638 DKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDL 697
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
+ N A E ++ + ++ ++DELC G++ E SR
Sbjct: 698 QVETEKNPATSESKEELNT----EAIAYSDVIDELCSRGRLKEHSR 739
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 193/412 (46%), Gaps = 13/412 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ ++ M +R S V +FNI+ L K + G P++ +YN +I+
Sbjct: 212 WVLYAEMFRLRISST-VYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIH 270
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+ G + +L + P++ T+ SLI G+C E R+ EA+ LF K+ G P
Sbjct: 271 GYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVP 330
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELF 168
N TYNTLI+G G A + +EM +EG + +A ++
Sbjct: 331 NAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMI 390
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+M+ + I PD +TY +I G+ + +A L EM+ +G++P VT+ ++ L +
Sbjct: 391 KEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRR 450
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
+M EA L + ++ GV P+ ++N ++DG C G V RA L M+ ++
Sbjct: 451 NRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTF 510
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ L+ G C+ ++E A L EM +GIKPD + YNTL ++ AF++ DEM
Sbjct: 511 NTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLS 570
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G TY I LCKN A EL + + D Y LI+G+
Sbjct: 571 IGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 622
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 183/372 (49%), Gaps = 14/372 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+N + + + + + + G+ PD YTY LI+ CK GR+ +
Sbjct: 260 PNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGL 319
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ PNAVT+ +LI G C + + A + ++ G P+V TYN L++ L+
Sbjct: 320 FDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFM 379
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G A ++ +EM NG + G KA +L +M + I P V
Sbjct: 380 EGRMGEADDMIKEMRKKGIIPDAITYNILING-YSRCGNAKKAFDLHNEMLSKGIEPTHV 438
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYTS+I N EA L +++DQGV P+V+ FN ++D C NG ++ A LL M
Sbjct: 439 TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEM 498
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ V P+ +NTLM G C G+V A+ L M+ G SY+ LI+GY + +I
Sbjct: 499 DRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDI 558
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A + EMLS G P ++ YN L L + + + A +L EM G++ D TY +
Sbjct: 559 KDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 618
Query: 362 IDGLCKNSYIVE 373
I+G+ +VE
Sbjct: 619 IEGMGNVDTLVE 630
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 191/394 (48%), Gaps = 23/394 (5%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
YM+ + P + + N + K + L+ + + +YT+NI++N CK
Sbjct: 181 YMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKE 240
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
G++ +G + F PN V++ ++I G + I A + +RV G EP+ +TY
Sbjct: 241 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 300
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
+LI+G+ + EG +++A LF +M + + P+ VTY +
Sbjct: 301 GSLISGMCK-----------------------EGRLEEASGLFDKMVEIGLVPNAVTYNT 337
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I G+C D A EM+ +G+ P+V T+N+++ L G+M EA ++ M + G
Sbjct: 338 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 397
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
+ P+A YN L++G+ G +A +L M S G T +Y+ LI + ++ A
Sbjct: 398 IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEAD 457
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
L+ ++L +G+ PDV+++N + VERAF L EM R V D T+ T + G
Sbjct: 458 DLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGR 517
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
C+ + EA L ++ + D +YN LI G
Sbjct: 518 CREGKVEEARMLLDEMKRRGIKPDHISYNTLISG 551
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 178/380 (46%), Gaps = 23/380 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F++L + + D F + G+ P + T N +++ F K+ R+ +V+ +
Sbjct: 160 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 219
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
R + TF ++ LC E ++ +A + G +PNV +YNT+I+G
Sbjct: 220 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHG-------- 271
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
+ G ++ A+ + M+ + I PD TY S+I G C EA
Sbjct: 272 ---------------YSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEA 316
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
L +M++ G+ PN VT+N ++D C G ++ A D M++ G+ P+ YN L+
Sbjct: 317 SGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHA 376
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
+ GR+ A ++ M G +Y+ILINGY + + A L+ EMLSKGI+P
Sbjct: 377 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPT 436
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
V Y +L VL ++++ A LF+++ GV+ D + +DG C N + A L +
Sbjct: 437 HVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLK 496
Query: 380 TLRILKCELDIRAYNCLIDG 399
+ D +N L+ G
Sbjct: 497 EMDRKSVPPDEVTFNTLMQG 516
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 4/222 (1%)
Query: 181 VTYTSVIRGFCYANDWNEA-KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
+ + ++R C +EA KC + M ++G+ P + T N ++ K +M+ A L
Sbjct: 158 IVFDLLVRVCCELRRADEAFKCFYM-MKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYA 216
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M ++ + + +N +++ C G++ +A+E ME +G V SY+ +I+GY
Sbjct: 217 EMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRG 276
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
IEGA + M KGI+PD Y +L + + ++E A LFD+M G+ + TY
Sbjct: 277 NIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYN 336
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCEL-DIRAYNCLIDGL 400
T IDG C + A +R + K + + YN L+ L
Sbjct: 337 TLIDGYCNKGDLERAFS-YRDEMVKKGIMPSVSTYNLLVHAL 377
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 193/393 (49%), Gaps = 13/393 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F+++ + L +F + G P L + N L+N K G V +++
Sbjct: 159 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 218
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
R P+ + ++ C + ++ EAA K+ G EPN+ TY++LING G
Sbjct: 219 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 278
Query: 140 VALNLFEEMASGNGEFGV-------EGF-----VDKAKELFLQMKDEN-INPDVVTYTSV 186
A + + M+ V +G+ +D+A+++ M++E + PD Y +
Sbjct: 279 AAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVL 338
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G+C ++A LL EM+ G++ N+ N +++ CK G++ EA ++ M+ +
Sbjct: 339 IDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNL 398
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+P+++ YNTL+DG+C G + A L M G TV +Y+ L+ G C+ + AL
Sbjct: 399 KPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ 458
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
++ M+ +G+ PD V Y+TL LF++ E A L+ ++ G T+ T I GLC
Sbjct: 459 IWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLC 518
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
K +VEA E+F ++ L C D Y LIDG
Sbjct: 519 KMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDG 551
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 194/399 (48%), Gaps = 13/399 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S N L L KN T +++++ G+ PD++ +I++N FCK G+V
Sbjct: 189 PSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGF 248
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ ++ PN VT+ SLI G + + A + + G NV TY LI G +
Sbjct: 249 VKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCK 308
Query: 135 TGHTIVALNLF----EEMASGNGE--FGV-------EGFVDKAKELFLQMKDENINPDVV 181
A + EE A E +GV G +D A L +M + ++
Sbjct: 309 QCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLF 368
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
S+I G+C + +EA+ ++ M+D ++P+ ++N ++D C+ G EA L D M
Sbjct: 369 ICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKM 428
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+Q G+ P YNTL+ G C G + A +++ M G YS L++G K +
Sbjct: 429 LQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENF 488
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
EGA +L+ ++L++G + +NT+ L ++ ++ A ++FD+M+ G + D TYRT
Sbjct: 489 EGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTL 548
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
IDG CK S + +A ++ + I YN LI GL
Sbjct: 549 IDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGL 587
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 189/413 (45%), Gaps = 55/413 (13%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+FN + L K +F ++ G PD TY LI+ +CK V F V G +
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
R +P+ + SLI GL R++E L T++ + G PN+ TY LI+G +
Sbjct: 569 EREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCK---- 624
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
EG +DKA + +M + ++ +++ ++++ G +E
Sbjct: 625 -------------------EGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDE 665
Query: 199 AKCLLIEMMDQG--------------------------------VQPNVVTFNVIMDELC 226
A L+ +M+D G + PN + +N+ + LC
Sbjct: 666 ANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLC 725
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
K GK+D+A R ++ G P+ F Y TL+ G+ G V+ A L M G +
Sbjct: 726 KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIV 785
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+Y+ LING CK++ ++ A L+ ++ KG+ P+VV YNTL +I ++ AFKL D+M
Sbjct: 786 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 845
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+G++ TY I+GLCK+ I +++L + + + Y L+ G
Sbjct: 846 IEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQG 898
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 198/399 (49%), Gaps = 15/399 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +I+ K+ D K++ + G+ P++ TY+ LIN + +G V V
Sbjct: 224 PDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGV 283
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC-EPNVFTYNTLINGLY 133
L + + N VT+T LIKG C + ++ EA + ++ P+ Y LI+G
Sbjct: 284 LKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYC 343
Query: 134 RTGHTIVALNLFEEM-------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
RTG A+ L +EM + NG + G + +A+ + +M D N+ PD
Sbjct: 344 RTGKIDDAVRLLDEMLRLGLKTNLFICNSLING-YCKRGEIHEAEGVITRMVDWNLKPDS 402
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+Y +++ G+C +EA L +M+ +G++P V+T+N ++ LC+ G D+A ++ L
Sbjct: 403 YSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHL 462
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M++ GV P+ Y+TL+DG A L+ + + G T + +++ +I+G CK +
Sbjct: 463 MMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGK 522
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ A ++ +M G PD + Y TL + V +AFK+ M+R+ ++ Y +
Sbjct: 523 MVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNS 582
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I GL K+ +VE +L + I +I Y LIDG
Sbjct: 583 LISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDG 621
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 182/378 (48%), Gaps = 13/378 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNS-TGLFPDLYTYNILINCFCKMGRVSHGFVVL 75
V ++ +L K D + + + L PD Y +LI+ +C+ G++ +L
Sbjct: 296 VVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLL 355
Query: 76 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRT 135
+LR N SLI G C I EA + T++ + +P+ ++YNTL++G R
Sbjct: 356 DEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCRE 415
Query: 136 GHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTY 183
GHT A NL ++M E V G D A +++ M + PD V Y
Sbjct: 416 GHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGY 475
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
++++ G ++ A L +++ +G + +TFN ++ LCK GKM EA + D M
Sbjct: 476 STLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKD 535
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
+G P+ Y TL+DG+C V +A ++ +ME + ++ Y+ LI+G K++ +
Sbjct: 536 LGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVE 595
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
L EM +G+ P++V Y L + +++AF + EM +G++A+ T +
Sbjct: 596 VTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVS 655
Query: 364 GLCKNSYIVEAVELFRTL 381
GL + I EA L + +
Sbjct: 656 GLYRLGRIDEANLLMQKM 673
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 162/332 (48%), Gaps = 15/332 (4%)
Query: 82 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVA 141
F+P F ++K + A +F + G P++ + N+L+N L + G T A
Sbjct: 153 AFSP--TVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTA 210
Query: 142 LNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRG 189
++++M F +G VD+A +M++ + P++VTY S+I G
Sbjct: 211 HYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLING 270
Query: 190 FCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI-QIGVRP 248
+ D AK +L M ++GV NVVT+ +++ CK KMDEA ++L M + + P
Sbjct: 271 YVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVP 330
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
+ Y L+DG+C TG+++ A L M +G +F + LINGYCK EI A +
Sbjct: 331 DERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI 390
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
M+ +KPD YNTL AF L D+M ++G+ TY T + GLC+
Sbjct: 391 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRV 450
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+A++++ + D Y+ L+DGL
Sbjct: 451 GAFDDALQIWHLMMKRGVAPDEVGYSTLLDGL 482
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 124/245 (50%), Gaps = 23/245 (9%)
Query: 45 STGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 104
T L P+ YNI I CK G+V + F P+ T+ +LI G A +
Sbjct: 707 KTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVD 766
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKA 164
EA L ++ G PN+ TYN LINGL ++ + VD+A
Sbjct: 767 EAFRLRDEMLRRGLVPNIVTYNALINGLCKSEN-----------------------VDRA 803
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
+ LF ++ + + P+VVTY ++I G+C + + A L +M+++G+ P+VVT++ +++
Sbjct: 804 QRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALING 863
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
LCK+G ++ + +LL+ MI+ GV Y TL+ G+ +G + + +L+ M + T
Sbjct: 864 LCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTT 923
Query: 285 VFSYS 289
S+
Sbjct: 924 AISHK 928
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 113/248 (45%), Gaps = 20/248 (8%)
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ---GVQPNVV------------ 216
K +N P+V +Y ++ ++E + L +++D + NV+
Sbjct: 94 KQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFA 153
Query: 217 ----TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
F++I+ + G A + D M + G P+ N+L++ G + A +
Sbjct: 154 FSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYV 213
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
+ M +G VF SI++N +CK+ +++ A +M + G++P++V Y++L
Sbjct: 214 YQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVS 273
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL-DIR 391
+ VE A + M GV+ + TY I G CK + EA ++ R ++ + D R
Sbjct: 274 LGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDER 333
Query: 392 AYNCLIDG 399
AY LIDG
Sbjct: 334 AYGVLIDG 341
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 193/412 (46%), Gaps = 13/412 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ ++ M +R S V +FNI+ L K + G P++ +YN +I+
Sbjct: 234 WVLYAEMFRLRISST-VYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIH 292
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+ G + +L + P++ T+ SLI G+C E R+ EA+ LF K+ G P
Sbjct: 293 GYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVP 352
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELF 168
N TYNTLI+G G A + +EM +EG + +A ++
Sbjct: 353 NAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMI 412
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+M+ + I PD +TY +I G+ + +A L EM+ +G++P VT+ ++ L +
Sbjct: 413 KEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRR 472
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
+M EA L + ++ GV P+ ++N ++DG C G V RA L M+ ++
Sbjct: 473 NRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTF 532
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ L+ G C+ ++E A L EM +GIKPD + YNTL ++ AF++ DEM
Sbjct: 533 NTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLS 592
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G TY I LCKN A EL + + D Y LI+G+
Sbjct: 593 IGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 644
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 183/372 (49%), Gaps = 14/372 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+N + + + + + + G+ PD YTY LI+ CK GR+ +
Sbjct: 282 PNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGL 341
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ PNAVT+ +LI G C + + A + ++ G P+V TYN L++ L+
Sbjct: 342 FDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFM 401
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G A ++ +EM NG + G KA +L +M + I P V
Sbjct: 402 EGRMGEADDMIKEMRKKGIIPDAITYNILING-YSRCGNAKKAFDLHNEMLSKGIEPTHV 460
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYTS+I N EA L +++DQGV P+V+ FN ++D C NG ++ A LL M
Sbjct: 461 TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEM 520
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ V P+ +NTLM G C G+V A+ L M+ G SY+ LI+GY + +I
Sbjct: 521 DRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDI 580
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A + EMLS G P ++ YN L L + + + A +L EM G++ D TY +
Sbjct: 581 KDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 640
Query: 362 IDGLCKNSYIVE 373
I+G+ +VE
Sbjct: 641 IEGMGNVDTLVE 652
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 191/394 (48%), Gaps = 23/394 (5%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
YM+ + P + + N + K + L+ + + +YT+NI++N CK
Sbjct: 203 YMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKE 262
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
G++ +G + F PN V++ ++I G + I A + +RV G EP+ +TY
Sbjct: 263 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 322
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
+LI+G+ + EG +++A LF +M + + P+ VTY +
Sbjct: 323 GSLISGMCK-----------------------EGRLEEASGLFDKMVEIGLVPNAVTYNT 359
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I G+C D A EM+ +G+ P+V T+N+++ L G+M EA ++ M + G
Sbjct: 360 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 419
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
+ P+A YN L++G+ G +A +L M S G T +Y+ LI + ++ A
Sbjct: 420 IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEAD 479
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
L+ ++L +G+ PDV+++N + VERAF L EM R V D T+ T + G
Sbjct: 480 DLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGR 539
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
C+ + EA L ++ + D +YN LI G
Sbjct: 540 CREGKVEEARMLLDEMKRRGIKPDHISYNTLISG 573
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 178/380 (46%), Gaps = 23/380 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F++L + + D F + G+ P + T N +++ F K+ R+ +V+ +
Sbjct: 182 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 241
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
R + TF ++ LC E ++ +A + G +PNV +YNT+I+G
Sbjct: 242 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHG-------- 293
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
+ G ++ A+ + M+ + I PD TY S+I G C EA
Sbjct: 294 ---------------YSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEA 338
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
L +M++ G+ PN VT+N ++D C G ++ A D M++ G+ P+ YN L+
Sbjct: 339 SGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHA 398
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
+ GR+ A ++ M G +Y+ILINGY + + A L+ EMLSKGI+P
Sbjct: 399 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPT 458
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
V Y +L VL ++++ A LF+++ GV+ D + +DG C N + A L +
Sbjct: 459 HVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLK 518
Query: 380 TLRILKCELDIRAYNCLIDG 399
+ D +N L+ G
Sbjct: 519 EMDRKSVPPDEVTFNTLMQG 538
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 117/241 (48%), Gaps = 7/241 (2%)
Query: 165 KELFLQM---KDENINPDVVTYTSVIRGFCYANDWNEA-KCLLIEMMDQGVQPNVVTFNV 220
+ELF ++ +D + + ++R C +EA KC + M ++G+ P + T N
Sbjct: 161 RELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYM-MKEKGIVPKIETCND 219
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
++ K +M+ A L M ++ + + +N +++ C G++ +A+E ME +G
Sbjct: 220 MLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLG 279
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
V SY+ +I+GY IEGA + M KGI+PD Y +L + + ++E A
Sbjct: 280 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEAS 339
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL-DIRAYNCLIDG 399
LFD+M G+ + TY T IDG C + A +R + K + + YN L+
Sbjct: 340 GLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFS-YRDEMVKKGIMPSVSTYNLLVHA 398
Query: 400 L 400
L
Sbjct: 399 L 399
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 193/393 (49%), Gaps = 13/393 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F+++ + L +F + G P L + N L+N K G V +++
Sbjct: 125 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 184
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
R P+ + ++ C + ++ EAA K+ G EPN+ TY++LING G
Sbjct: 185 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 244
Query: 140 VALNLFEEMASGNGEFGV-------EGF-----VDKAKELFLQMKDEN-INPDVVTYTSV 186
A + + M+ V +G+ +D+A+++ M++E + PD Y +
Sbjct: 245 AAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVL 304
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G+C ++A LL EM+ G++ N+ N +++ CK G++ EA ++ M+ +
Sbjct: 305 IDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNL 364
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+P+++ YNTL+DG+C G + A L M G TV +Y+ L+ G C+ + AL
Sbjct: 365 KPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ 424
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
++ M+ +G+ PD V Y+TL LF++ E A L+ ++ G T+ T I GLC
Sbjct: 425 IWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLC 484
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
K +VEA E+F ++ L C D Y LIDG
Sbjct: 485 KMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDG 517
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 191/399 (47%), Gaps = 13/399 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S N L L KN T +++++ G+ PD++ +I++N FCK G+V
Sbjct: 155 PSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGF 214
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ ++ PN VT+ SLI G + + A + + G NV TY LI G +
Sbjct: 215 VKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCK 274
Query: 135 TGHTIVALNLFEEMASGNG------EFGV-------EGFVDKAKELFLQMKDENINPDVV 181
A + M +GV G +D A L +M + ++
Sbjct: 275 QCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLF 334
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
S+I G+C + +EA+ ++ M+D ++P+ ++N ++D C+ G EA L D M
Sbjct: 335 ICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKM 394
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+Q G+ P YNTL+ G C G + A +++ M G YS L++G K +
Sbjct: 395 LQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENF 454
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
EGA +L+ ++L++G + +NT+ L ++ ++ A ++FD+M+ G + D TYRT
Sbjct: 455 EGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTL 514
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
IDG CK S + +A ++ + I YN LI GL
Sbjct: 515 IDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGL 553
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 198/399 (49%), Gaps = 15/399 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +I+ K+ D K++ + G+ P++ TY+ LIN + +G V V
Sbjct: 190 PDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGV 249
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC-EPNVFTYNTLINGLY 133
L + + N VT+T LIKG C + ++ EA + ++ P+ Y LI+G
Sbjct: 250 LKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYC 309
Query: 134 RTGHTIVALNLFEEM-------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
RTG A+ L +EM + NG + G + +A+ + +M D N+ PD
Sbjct: 310 RTGKIDDAVRLLDEMLRLGLKTNLFICNSLING-YCKRGEIHEAEGVITRMVDWNLKPDS 368
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+Y +++ G+C +EA L +M+ +G++P V+T+N ++ LC+ G D+A ++ L
Sbjct: 369 YSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHL 428
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M++ GV P+ Y+TL+DG A L+ + + G T + +++ +I+G CK +
Sbjct: 429 MMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGK 488
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ A ++ +M G PD + Y TL + V +AFK+ M+R+ ++ Y +
Sbjct: 489 MVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNS 548
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I GL K+ +VE +L + I +I Y LIDG
Sbjct: 549 LISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDG 587
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 183/398 (45%), Gaps = 46/398 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L + +D L ++ + G+ PD Y+ L++ KM +
Sbjct: 401 PTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTL 460
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
IL FT + +TF ++I GLC +++EA +F K++ GC P+ TY TLI+G +
Sbjct: 461 WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 520
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
+ A + M +G F V+ +L +M + P++V
Sbjct: 521 ASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVE-VTDLLTEMGIRGLTPNIV 579
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY ++I G+C ++A EM + G+ N++ + ++ L + G++DEA+ L+ M
Sbjct: 580 TYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKM 639
Query: 242 IQIG--------------------------------VRPNAFVYNTLMDGFCLTGRVNRA 269
+ G + PN VYN + G C TG+V+ A
Sbjct: 640 VDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDA 699
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
+ F + G F+Y LI+GY ++ A L EML +G+ P++V YN L
Sbjct: 700 RRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALING 759
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
L + V+RA +LF ++ + G+ + TY T IDG CK
Sbjct: 760 LCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCK 797
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 182/378 (48%), Gaps = 13/378 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNS-TGLFPDLYTYNILINCFCKMGRVSHGFVVL 75
V ++ +L K D + + + L PD Y +LI+ +C+ G++ +L
Sbjct: 262 VVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLL 321
Query: 76 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRT 135
+LR N SLI G C I EA + T++ + +P+ ++YNTL++G R
Sbjct: 322 DEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCRE 381
Query: 136 GHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTY 183
GHT A NL ++M E V G D A +++ M + PD V Y
Sbjct: 382 GHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGY 441
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
++++ G ++ A L +++ +G + +TFN ++ LCK GKM EA + D M
Sbjct: 442 STLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKD 501
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
+G P+ Y TL+DG+C V +A ++ +ME + ++ Y+ LI+G K++ +
Sbjct: 502 LGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVE 561
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
L EM +G+ P++V Y L + +++AF + EM +G++A+ T +
Sbjct: 562 VTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVS 621
Query: 364 GLCKNSYIVEAVELFRTL 381
GL + I EA L + +
Sbjct: 622 GLYRLGRIDEANLLMQKM 639
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 162/331 (48%), Gaps = 15/331 (4%)
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
F+P F ++K + A +F + G P++ + N+L+N L + G T A
Sbjct: 120 FSP--TVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAH 177
Query: 143 NLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
++++M F +G VD+A +M++ + P++VTY S+I G+
Sbjct: 178 YVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGY 237
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI-QIGVRPN 249
D AK +L M ++GV NVVT+ +++ CK KMDEA ++L M + + P+
Sbjct: 238 VSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPD 297
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
Y L+DG+C TG+++ A L M +G +F + LINGYCK EI A +
Sbjct: 298 ERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVIT 357
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
M+ +KPD YNTL AF L D+M ++G+ TY T + GLC+
Sbjct: 358 RMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVG 417
Query: 370 YIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+A++++ + D Y+ L+DGL
Sbjct: 418 AFDDALQIWHLMMKRGVAPDEVGYSTLLDGL 448
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 147/346 (42%), Gaps = 44/346 (12%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+FN + L K +F ++ G PD TY LI+ +CK V F V G +
Sbjct: 475 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 534
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
R +P+ + SLI GL R++E L T++ + G PN+ TY LI+G + G
Sbjct: 535 EREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGML 594
Query: 139 IVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDV------ 180
A + + EM + G +D+A L +M D PD
Sbjct: 595 DKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKS 654
Query: 181 --------------------------VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
+ Y I G C ++A+ + +G P+
Sbjct: 655 DIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPD 714
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
T+ ++ G +DEA RL D M++ G+ PN YN L++G C + V+RA+ LF
Sbjct: 715 NFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFH 774
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
+ G V +Y+ LI+GYCK ++ A L +M+ +GI P +
Sbjct: 775 KLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSI 820
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 134/310 (43%), Gaps = 55/310 (17%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ P P + +N L L K++ V L + GL P++ TY LI+ +CK G
Sbjct: 534 MEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGM 593
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG---------- 117
+ F + + + N + ++++ GL RI EA L K+ G
Sbjct: 594 LDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLK 653
Query: 118 ------------------CE----PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEF 155
C+ PN YN I GL +TG
Sbjct: 654 SDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGK------------------ 695
Query: 156 GVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNV 215
VD A+ F + + PD TY ++I G+ A + +EA L EM+ +G+ PN+
Sbjct: 696 -----VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNI 750
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
VT+N +++ LCK+ +D A RL + Q G+ PN YNTL+DG+C G ++ A +L
Sbjct: 751 VTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDK 810
Query: 276 MESMGCTHTV 285
M G + ++
Sbjct: 811 MIEEGISPSI 820
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 113/248 (45%), Gaps = 20/248 (8%)
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ---GVQPNVV------------ 216
K +N P+V +Y ++ ++E + L +++D + NV+
Sbjct: 60 KQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFA 119
Query: 217 ----TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
F++I+ + G A + D M + G P+ N+L++ G + A +
Sbjct: 120 FSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYV 179
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
+ M +G VF SI++N +CK+ +++ A +M + G++P++V Y++L
Sbjct: 180 YQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVS 239
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL-DIR 391
+ VE A + M GV+ + TY I G CK + EA ++ R ++ + D R
Sbjct: 240 LGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDER 299
Query: 392 AYNCLIDG 399
AY LIDG
Sbjct: 300 AYGVLIDG 307
>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 128/439 (29%), Positives = 198/439 (45%), Gaps = 56/439 (12%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNS-TGLFPDLYTYNILINCFCKMGRVSHGFVVL 75
V +FN + LA+ + + ++ + + PD+ TY IL+N CK GRV VL
Sbjct: 136 VFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVL 195
Query: 76 GRILRSCFT--PNAVTFTSLIKGLCAESRIMEAAALFTKLR---VFGCEPNVFTYNTLIN 130
+ R P+ VT +++ GLC R+ EA A F + R V GC PN TYN LI+
Sbjct: 196 DGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALA-FVEQRMSSVHGCPPNTVTYNCLID 254
Query: 131 GLYRTGHTIVALNLFEEMA--------------------SGNGEFGVEGFVDK------- 163
R G+ +A L E+M +G +E F +K
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEG 314
Query: 164 ----------------------AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
A ELF + E +PD + Y ++I G A +A
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACS 374
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
+ M + G + + +N+++ C+ ++ EA LL M ++G+RP+ YNTL+ G C
Sbjct: 375 MASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSC 434
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
G EL M GC +V ++ L++GYCK +I+ AL + M GI P+ V
Sbjct: 435 KAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNV 494
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
IYNTL L + V+ A +LFDEM+ V A+ T+ + GL + +A EL +
Sbjct: 495 IYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQM 554
Query: 382 RILKCELDIRAYNCLIDGL 400
R +C D + L++ L
Sbjct: 555 REERCFPDYVTVDVLMEWL 573
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 184/416 (44%), Gaps = 58/416 (13%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNST--GLFPDLYTYNILINCFCKM 65
L++RP V + N + L K+ L+ ++ S+ G P+ TYN LI+ FC++
Sbjct: 203 LDIRPD---VVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRV 259
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP--NVF 123
G +S + ++ ++ N VT +++ GLC R A F + R E N
Sbjct: 260 GNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAV 319
Query: 124 TYNTLINGLYRTGHTIVALNLFEE-------------------------------MASGN 152
TY+TL+ L T + +A+ LF E MAS
Sbjct: 320 TYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSM 379
Query: 153 GEFG-----------VEGFVDKAK-----ELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
E G + GF K + EL +MK+ I PDV TY +++ G C A D+
Sbjct: 380 KEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDF 439
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
LL +M+D G QP+V+TF ++ CK GK+DEA R+L M + G+ PN +YNTL
Sbjct: 440 AAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTL 499
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+D C G V+ A ELF M+ V +++ L+ G E A L +M +
Sbjct: 500 IDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERC 559
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG----VAADTWTYRTFIDGLCKN 368
PD V + L L I + +R + + + V+ T Y F GL +
Sbjct: 560 FPDYVTVDVLMEWLPVIGETDRLKRFMQQGEHTASKRIVSDRTSAYFHFATGLAET 615
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 192/401 (47%), Gaps = 30/401 (7%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFGCLAKN---KHYDTVLSLFKRLNSTGLFPDLYTYNIL 58
+FD M+ +P +++ G + K Y+ ++ + KR + YTY
Sbjct: 371 ALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKR----NIVISPYTYGTA 426
Query: 59 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC 118
+ C G + + ++ + S PN V +T+LIK +SR +A + ++R G
Sbjct: 427 VKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGI 486
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINP 178
P+ F YN+LI GL + +D+A+ L+M + P
Sbjct: 487 APDTFCYNSLIIGLSKAKK-----------------------MDEARSFLLEMVENGFKP 523
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D TY + I G+ A ++ A + EM++ GV PN V +++E CK GK+ EA
Sbjct: 524 DAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAF 583
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
M++ G+ +A Y LM+G G+VN A+E+F M G VFSY LI+G+ K
Sbjct: 584 RSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKL 643
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
++ A S++ EM+ G+ +V+IYN L ++E+A +L DEM G + TY
Sbjct: 644 GNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTY 703
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
T IDG CK+ + EA +LF +++ D Y L+DG
Sbjct: 704 CTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDG 744
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 192/444 (43%), Gaps = 60/444 (13%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
+P C +++ G L+K K D S + G PD +TY I+ + + G +
Sbjct: 487 APDTFCYNSLIIG-LSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASAD 545
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+ +L PN V T LI C + +++EA + F + G + TY L+NGL
Sbjct: 546 KYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGL 605
Query: 133 YRTGHTIVALNLFEEMASGNG------EFG--VEGF-----VDKAKELFLQMKDENINPD 179
+ G A +F EM G G +G ++GF + KA +F +M + +
Sbjct: 606 VKNGKVNDAEEIFHEM-RGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSN 664
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
V+ Y ++ GFC + + +AK LL EM +G PN VT+ I+D CK+G + EA +L D
Sbjct: 665 VIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFD 724
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT----------VF--- 286
M G+ P++FVY TL+DG C V RA +F + E GC + VF
Sbjct: 725 EMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEK-GCASSSAPFNALINWVFKFG 783
Query: 287 --------------------------SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
+Y+I+I+ CK +E A L+ M + P V
Sbjct: 784 KTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTV 843
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
+ Y +L ++ + F +FDE+ G+ D Y I+ K +A+ L
Sbjct: 844 ITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQ 903
Query: 381 LRILK-----CELDIRAYNCLIDG 399
+ C+L I L+ G
Sbjct: 904 MFAKNAVDDGCKLSISTCRALLSG 927
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 170/421 (40%), Gaps = 37/421 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + N L L K D ++K + + D+ +Y +LI C+ G V V
Sbjct: 187 PSLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDV 246
Query: 75 LGRILR-------------------SC--FTPNAVTFTSLIKGLCAESRIMEAAALFTKL 113
L + SC P+ ++ LI GLC + R+ +A +L ++
Sbjct: 247 LLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEM 306
Query: 114 RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV--------------EG 159
G + Y+ LI+GL + + A L EM S F + EG
Sbjct: 307 NSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHG--FSIDPMMYDYFICVMSKEG 364
Query: 160 FVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 219
++KAK LF M + P Y S+I GF + + LL+E+ + + + T+
Sbjct: 365 AMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYG 424
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
+ +C +G +D A ++ M G RPN +Y TL+ F R A + M
Sbjct: 425 TAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQ 484
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G F Y+ LI G K K+++ A S EM+ G KPD Y E + A
Sbjct: 485 GIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASA 544
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
K EM GV + I+ CK ++EA FR++ D + Y L++G
Sbjct: 545 DKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNG 604
Query: 400 L 400
L
Sbjct: 605 L 605
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 142/325 (43%), Gaps = 20/325 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+ L +K + S+F + GL ++ YN+L+ FC+ G + +
Sbjct: 628 PDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKEL 687
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + F PNAVT+ ++I G C + EA LF ++++ G P+ F Y TL++G R
Sbjct: 688 LDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCR 747
Query: 135 TGHTIVALNLFEEMASGNG--------------EFG-VEGFVDKAKELFLQMKDENINPD 179
A+ +FE G +FG E D L D+ P+
Sbjct: 748 LNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPN 807
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
VTY +I C + AK L M + P V+T+ +++ K G+ E + D
Sbjct: 808 DVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFD 867
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM-----GCTHTVFSYSILING 294
+I G+ P+ +Y+ +++ F G +A L M + GC ++ + L++G
Sbjct: 868 EVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSG 927
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPD 319
+ K E+E A + M+ PD
Sbjct: 928 FAKVGEMEVAEKVVENMVRLKYIPD 952
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 73/178 (41%), Gaps = 27/178 (15%)
Query: 215 VVTFNVIMDELCKNGKMDEA----SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
V+ F +++D + G +DEA S DL + + P+ N L+D R++
Sbjct: 152 VLLFGILIDGYIEKGFLDEAVFVFSSTKDL--DLDLVPSLARCNHLLDALLKRNRLDLFW 209
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIE---------------------GALSLYG 309
+++ M V SY +LI +C++ ++ AL L
Sbjct: 210 DVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKK 269
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
M KG+ P YN L L + ++E A L EM G+ AD Y IDGL K
Sbjct: 270 SMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLK 327
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/424 (29%), Positives = 196/424 (46%), Gaps = 58/424 (13%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R S V ++L AK + L +F ++ + GL PD+ N ++ V+
Sbjct: 131 RNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNE 190
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
V +++ P VTF +++ C E + A + +R+FGC+PN +YN L+N
Sbjct: 191 VEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVN 250
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
GL SG GEF D+AKEL QM + TY +IRGF
Sbjct: 251 GL-----------------SGKGEF------DRAKELIEQMSMLGLKVSAHTYNPLIRGF 287
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI-------- 242
C + EA L EM+ +G P VVT+N IM LC+ G++ +A R LD+M+
Sbjct: 288 CKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDL 347
Query: 243 -----------QIG----------------VRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
++G + P+ YNTL+DG C TG ++ AK +
Sbjct: 348 VSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDD 407
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
M G V +++IL+ G+C+ + A L+ EMLS+G+KPD + Y T V ++
Sbjct: 408 MIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGN 467
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
+AF + +EM+ +G D TY I+GLCK +A EL + +R+ D Y
Sbjct: 468 PSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTS 527
Query: 396 LIDG 399
+I
Sbjct: 528 IIHA 531
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 202/394 (51%), Gaps = 12/394 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N L K + ++ L + + G P + TYN ++ C++GRVS L +
Sbjct: 279 TYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVM 338
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ P+ V++ +LI G EA LF++LR P+V TYNTLI+G RTG+
Sbjct: 339 VNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNL 398
Query: 139 IVALNLFEEMASG-------NGEFGVEGF-----VDKAKELFLQMKDENINPDVVTYTSV 186
+A + ++M V GF + AKELF +M + PD + YT+
Sbjct: 399 DIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTR 458
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G + ++A + EM +G P+++T+NV+++ LCK G D+A+ L+ M G+
Sbjct: 459 IVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGI 518
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+ Y +++ ++G + +A+E+F M G +V +Y++LI+ Y ++ A
Sbjct: 519 VPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKK 578
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
+ EM KG+ P+V+ YN L L + + ++ A+ LF EM+ GV+ + +TY I+
Sbjct: 579 YFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENS 638
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Y +A++L++ + + + D ++ L+ L
Sbjct: 639 NLQYWQDALKLYKDMLDREIKPDSCTHSALMKHL 672
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 183/384 (47%), Gaps = 27/384 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S+N L ++ ++ L LF L S L P + TYN LI+ C+ G + +
Sbjct: 345 PDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGM 404
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ P+ VTFT L++G C + A LF ++ G +P+ Y T I G +
Sbjct: 405 KDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELK 464
Query: 135 TGHTIVALNLFEEM-ASG------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G+ A + EEM A G NG + F D A EL +M+ E I PD V
Sbjct: 465 LGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNF-DDANELVQKMRLEGIVPDHV 523
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYTS+I + +A+ + +M+ +G+ P+VVT+ V++ G++D A + D M
Sbjct: 524 TYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEM 583
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
GV PN YN L+ G C ++ A LF MES G + ++Y+ILIN +
Sbjct: 584 QDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYW 643
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA------DT 355
+ AL LY +ML + IKPD ++ L + + + +KL ++ + + T
Sbjct: 644 QDALKLYKDMLDREIKPDSCTHSAL------MKHLSKDYKLLAVLRLENLPLAIVEINST 697
Query: 356 WTYRTFID-GLCKNSYIVEAVELF 378
W F+ KN+ A+ +F
Sbjct: 698 WIAEGFVKLEESKNNSHFRAIHVF 721
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 23/231 (9%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + ++N+L L K ++D L +++ G+ PD TY +I+ G +
Sbjct: 484 PPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEE 543
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
V +L+ P+ VT+T LI R+ A F +++ G PNV TYN LI GL
Sbjct: 544 VFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLC 603
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ VA NLF EM S + ++P+ TYT +I
Sbjct: 604 KENMMDVAYNLFAEMES-----------------------KGVSPNKYTYTILINENSNL 640
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
W +A L +M+D+ ++P+ T + +M L K+ K+ RL +L + I
Sbjct: 641 QYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLRLENLPLAI 691
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 22/193 (11%)
Query: 212 QPNV----VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
QPN F I+D L KNG M A +++ I++ V + V + L+ C
Sbjct: 78 QPNFHRSETAFVAILDILAKNGFMKPAYWVMEKAIEVKV--DGGVLDVLVGIGC-----G 130
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
R E+ V + +LI + K +E L ++ +M++ G+ PDV N +
Sbjct: 131 RNSEVSVKL-----------LDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVL 179
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
+L + V +++ M + + T+ T +D CK + AVE+ +R+ C+
Sbjct: 180 KLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCD 239
Query: 388 LDIRAYNCLIDGL 400
+ +YN L++GL
Sbjct: 240 PNDVSYNVLVNGL 252
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 122/402 (30%), Positives = 191/402 (47%), Gaps = 15/402 (3%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P P ++N L L + LS+ + G PD+ TYNIL+ CK GR
Sbjct: 2 PVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCK-GRGYRQ 60
Query: 72 FVVLGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ L ++R+ TPN VT+ L+ G+C E + +A L L GC+P+ YNT++
Sbjct: 61 AMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLK 120
Query: 131 GL-----YRTGHTIVALNLFEEMASGNGEFGV-------EGFVDKAKELFLQMKDENINP 178
GL + +V L E F V +G + +A +L +M
Sbjct: 121 GLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTA 180
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
++VTY ++I G C + + A LL +M G +P++VT+N ++ LC + +A L+
Sbjct: 181 NIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELM 240
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
D M Q G P+ +NTL+ C G + A E+F M GCT +YS +I+G K
Sbjct: 241 DNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKA 300
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+++ AL L+ EM KG PD IY L L + +E A + ++Q G++ T Y
Sbjct: 301 TKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLY 359
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ GLC+N A+++ + C D Y LI+GL
Sbjct: 360 NAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGL 401
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 151/320 (47%), Gaps = 17/320 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N + L + + L + P+ T+N++I C+ G + +
Sbjct: 110 PSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQL 169
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ + T N VT+ ++I GLC + + A L +K++ +GC+P++ TYNTL+ GL
Sbjct: 170 LEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCS 229
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+ A L + M G +G + A E+F QM D+ P+ +T
Sbjct: 230 AARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSIT 289
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+++I G A ++A L EM +G P+ + + ++ + L + ++EA + + +
Sbjct: 290 YSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQ 348
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ P+ +YN ++ G C G+ A ++ M S GC +Y ILI G E
Sbjct: 349 DSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGL----AYE 404
Query: 303 GALSLYGEMLSKGIKPDVVI 322
G L+ E+L K DV++
Sbjct: 405 GYLNEARELLIKLCSRDVLV 424
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 188/387 (48%), Gaps = 24/387 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + K D + R+ G PD+ TYNILI FC GR+ V
Sbjct: 144 PDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRV 203
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ ++L+ P +T+T LI+ + I EA L ++ G P+ +TYN ++NG+ +
Sbjct: 204 MDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCK 263
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
EG +D+A E ++ V TY ++R
Sbjct: 264 -----------------------EGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEG 300
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
W + L+ +M+ +G +PN +T++ ++ LC++GK+DEA +L +M + + P+ + Y+
Sbjct: 301 KWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYD 360
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ C G+V+ A E M S G + SY+ ++ CKN + AL+++ ++
Sbjct: 361 PLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEV 420
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G P+ YNTLF L+ RA + EM +G+ D TY + I LC++ + +A
Sbjct: 421 GCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQA 480
Query: 375 VELFRTL-RILKCELDIRAYNCLIDGL 400
+EL + KC+ + +YN ++ GL
Sbjct: 481 IELLVDMFESEKCQPTVISYNTVLLGL 507
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 175/394 (44%), Gaps = 24/394 (6%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P V ++NIL G D L + +L P + TY ILI G
Sbjct: 172 MKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGG 231
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ +L +L P+ T+ ++ G+C E + A +++ GC V TYN
Sbjct: 232 IDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNI 291
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
L+ L + G E+G ++L M + P+ +TY+++I
Sbjct: 292 LLRDL---------------LNEGKWEYG--------EKLMSDMLVKGCEPNPITYSTLI 328
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
C +EAK +L M ++ + P+ +++ ++ LC+ GK+D A LD MI G
Sbjct: 329 TALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHL 388
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P+ YN+++ C G + A +F + +GC SY+ L + + AL +
Sbjct: 389 PDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGM 448
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM-QRDGVAADTWTYRTFIDGLC 366
EMLS GI PD + YN+L L V++A +L +M + + +Y T + GLC
Sbjct: 449 ILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLC 508
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
K I++A+E+ + C + Y LI G+
Sbjct: 509 KVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGI 542
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 158/342 (46%), Gaps = 24/342 (7%)
Query: 59 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC 118
+N CK + L ++ + P+ + T LIKG +I +A + L G
Sbjct: 84 LNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG- 142
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINP 178
+P+VF YN +I+G + VD A ++ +MK P
Sbjct: 143 KPDVFAYNAVISGFCKADR-----------------------VDHASKVLDRMKKRGFEP 179
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
DVVTY +I FC + A ++ +++ +P V+T+ ++++ G +DEA +LL
Sbjct: 180 DVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLL 239
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
D M+ G+RP+ + YN +++G C G ++RA E + GC V +Y+IL+
Sbjct: 240 DEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNE 299
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+ E L +ML KG +P+ + Y+TL L +++ A + M+ +A D ++Y
Sbjct: 300 GKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSY 359
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I LC+ + A+E + DI +YN ++ L
Sbjct: 360 DPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASL 401
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 118/244 (48%), Gaps = 14/244 (5%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P P+ +++ L L ++ D ++ K + L PD Y+Y+ LI+ C+ G+V
Sbjct: 319 PNPI-TYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIE 377
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
L ++ P+ +++ S++ LC EA +F KL GC PN +YNTL L+
Sbjct: 378 FLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALW 437
Query: 134 RTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQM-KDENINPDV 180
+G I AL + EM S + +G VD+A EL + M + E P V
Sbjct: 438 SSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTV 497
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
++Y +V+ G C +A +L M+++G PN T+ +++ + G +A L +L
Sbjct: 498 ISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELANL 557
Query: 241 MIQI 244
++ +
Sbjct: 558 LVNM 561
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 90/227 (39%), Gaps = 34/227 (14%)
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV--------------------- 246
DQ F ++ CK+ K DE+ L M+ G
Sbjct: 70 DQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIE 129
Query: 247 -------------RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
+P+ F YN ++ GFC RV+ A ++ M+ G V +Y+ILI
Sbjct: 130 KAIQVMEILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIG 189
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
+C ++ AL + ++L KP V+ Y L ++ A KL DEM G+
Sbjct: 190 NFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRP 249
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D +TY ++G+CK + A E + C + YN L+ L
Sbjct: 250 DRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDL 296
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 182/342 (53%), Gaps = 25/342 (7%)
Query: 37 LSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 96
++ + + GL PD Y ++I FC+ G +S V ++ P+ VT+ +L+ G
Sbjct: 1 MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 60
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG 156
LC E R+++A L ++R G P++ T+ TLI+G +
Sbjct: 61 LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHG-----------------------YC 97
Query: 157 VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
+EG +DKA +LF M ++ + PD+VTY ++I G C D ++A L +M + + PN V
Sbjct: 98 IEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHV 157
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
T+++++D C+ G++++A LD MI G+ PN YN+++ G+C +G V++ ++ M
Sbjct: 158 TYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKM 217
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH-Q 335
+ + +Y+ LI+GY K ++ A L M + ++PDVV YN L + F +H
Sbjct: 218 MVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNML-INGFSVHGN 276
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
V+ A +F++M G+ D +TY + I+G EA +L
Sbjct: 277 VQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQL 318
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 157/320 (49%), Gaps = 25/320 (7%)
Query: 82 CF--TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
CF P+ V +T +I G C + +A + ++ GC P+V TYNTL+NGL + +
Sbjct: 9 CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLL 68
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
A L EM ++ + PD+ T+T++I G+C ++A
Sbjct: 69 DAEGLLNEM-----------------------RERGVPPDLCTFTTLIHGYCIEGKLDKA 105
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
L M++Q ++P++VT+N ++D +C+ G +D+A+ L D M + PN Y+ L+D
Sbjct: 106 LQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDS 165
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
C G+V A M + G + +Y+ +I GYC++ + +M+ + PD
Sbjct: 166 HCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPD 225
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
++ YNTL + ++ AFKL + M+++ V D TY I+G + + EA +F
Sbjct: 226 LITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFE 285
Query: 380 TLRILKCELDIRAYNCLIDG 399
+ E D Y +I+G
Sbjct: 286 KMCAKGIEPDRYTYMSMING 305
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 159/317 (50%), Gaps = 12/317 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++ G + L + + G PD+ TYN L+N CK R+ +
Sbjct: 14 PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 73
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P+ TFT+LI G C E ++ +A LF + P++ TYNTLI+G+ R
Sbjct: 74 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 133
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G A +L+++M S +G V+ A +M ++ I P+++T
Sbjct: 134 QGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 193
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S+I+G+C + + ++ + L +MM V P+++T+N ++ K KM +A +LL++M
Sbjct: 194 YNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMME 253
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ V+P+ YN L++GF + G V A +F M + G ++Y +ING+ +
Sbjct: 254 KEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSK 313
Query: 303 GALSLYGEMLSKGIKPD 319
A L+ EML +G PD
Sbjct: 314 EAFQLHDEMLQRGFAPD 330
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 126/270 (46%), Gaps = 23/270 (8%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R PP +C+F L D L LF + + L PD+ TYN LI+ C+ G +
Sbjct: 80 RGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDK 139
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ + PN VT++ LI C + ++ +A ++ G PN+ TYN++I
Sbjct: 140 ANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIK 199
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
G R+G+ V K ++ +M ++PD++TY ++I G+
Sbjct: 200 GYCRSGN-----------------------VSKGQKFLQKMMVNKVSPDLITYNTLIHGY 236
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
+ ++A LL M + VQP+VVT+N++++ +G + EA + + M G+ P+
Sbjct: 237 IKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDR 296
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+ Y ++++G G A +L M G
Sbjct: 297 YTYMSMINGHVTAGNSKEAFQLHDEMLQRG 326
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 117/247 (47%), Gaps = 24/247 (9%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD MLN R P + ++N L + + D L+ ++S +FP+ TY+ILI+
Sbjct: 108 LFDTMLNQRLRPD-IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSH 166
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ G+V F L ++ PN +T+ S+IKG C + + K+ V P++
Sbjct: 167 CEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDL 226
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TYNTLI+G + E + A +L M+ E + PDVVT
Sbjct: 227 ITYNTLIHGYIK-----------------------EDKMHDAFKLLNMMEKEKVQPDVVT 263
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I GF + EA + +M +G++P+ T+ +++ G EA +L D M+
Sbjct: 264 YNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEML 323
Query: 243 QIGVRPN 249
Q G P+
Sbjct: 324 QRGFAPD 330
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 63/113 (55%)
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y+++I G+C+ + AL + EM+ G PDVV YNTL L + ++ A L +EM+
Sbjct: 19 YTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMR 78
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GV D T+ T I G C + +A++LF T+ + DI YN LIDG+
Sbjct: 79 ERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGM 131
>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 128/439 (29%), Positives = 198/439 (45%), Gaps = 56/439 (12%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNS-TGLFPDLYTYNILINCFCKMGRVSHGFVVL 75
V +FN + LA+ + + ++ + + PD+ TY IL+N CK GRV VL
Sbjct: 136 VFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVL 195
Query: 76 GRILRSCFT--PNAVTFTSLIKGLCAESRIMEAAALFTKLR---VFGCEPNVFTYNTLIN 130
+ R P+ VT +++ GLC R+ EA A F + R V GC PN TYN LI+
Sbjct: 196 DGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALA-FVEQRMSSVHGCPPNTVTYNCLID 254
Query: 131 GLYRTGHTIVALNLFEEMA--------------------SGNGEFGVEGFVDK------- 163
R G+ +A L E+M +G +E F +K
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEG 314
Query: 164 ----------------------AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
A ELF + E +PD + Y ++I G A +A
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACS 374
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
+ M + G + + +N+++ C+ ++ EA LL M ++G+RP+ YNTL+ G C
Sbjct: 375 MASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSC 434
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
G EL M GC +V ++ L++GYCK +I+ AL + M GI P+ V
Sbjct: 435 KAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNV 494
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
IYNTL L + V+ A +LFDEM+ V A+ T+ + GL + +A EL +
Sbjct: 495 IYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQM 554
Query: 382 RILKCELDIRAYNCLIDGL 400
R +C D + L++ L
Sbjct: 555 REERCFPDYVTVDVLMEWL 573
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 173/382 (45%), Gaps = 54/382 (14%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNST--GLFPDLYTYNILINCFCKM 65
L++RP V + N + L K+ L+ ++ S+ G P+ TYN LI+ FC++
Sbjct: 203 LDIRPD---VVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRV 259
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP--NVF 123
G +S + ++ ++ N VT +++ GLC R A F + R E N
Sbjct: 260 GNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAV 319
Query: 124 TYNTLINGLYRTGHTIVALNLFEE-------------------------------MASGN 152
TY+TL+ L T + +A+ LF E MAS
Sbjct: 320 TYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSM 379
Query: 153 GEFG-----------VEGFVDKAK-----ELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
E G + GF K + EL +MK+ I PDV TY +++ G C A D+
Sbjct: 380 KEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDF 439
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
LL +M+D G QP+V+TF ++ CK GK+DEA R+L M + G+ PN +YNTL
Sbjct: 440 AAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTL 499
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+D C G V+ A ELF M+ V +++ L+ G E A L +M +
Sbjct: 500 IDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERC 559
Query: 317 KPDVVIYNTLFVVLFEIHQVER 338
PD V + L L I + +R
Sbjct: 560 FPDYVTVDVLMEWLPVIGETDR 581
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 119/279 (42%), Gaps = 12/279 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+++ L G L + + LF S G PD Y +I+ + GR+ + +
Sbjct: 320 TYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSM 379
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ F + + LI G C + R+ EA L +++ G P+V TYNTL++G + G
Sbjct: 380 KEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDF 439
Query: 139 IVALNLFEEMASGNGE-----FG--VEGF-----VDKAKELFLQMKDENINPDVVTYTSV 186
L +M + FG V G+ +D+A + M + I+P+ V Y ++
Sbjct: 440 AAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTL 499
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I C D + A L EM ++ V NV TFN ++ L ++A L+D M +
Sbjct: 500 IDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERC 559
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
P+ + LM+ + G +R K E V
Sbjct: 560 FPDYVTVDVLMEWLPVIGETDRLKRFMQQGEHTASKRIV 598
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 179/353 (50%), Gaps = 9/353 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ + L + K D LF+ + G+ PD+YTY ILI+ FCK G +
Sbjct: 450 PDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSW 509
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + +PN VT+T+L+ ++ +A +F ++ C PN TY+ LI+GL +
Sbjct: 510 FDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCK 569
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKD-ENINPDVVTYTSVIRGFCYA 193
G A ++ ++ G ++ + + + KD + I+P+VVTY +++ G C A
Sbjct: 570 AGEIQKACEVYAKL------IGTSDNIES--DFYFEGKDTDTISPNVVTYGALVNGLCKA 621
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
++A LL M+ G +PN + ++ ++D CK G++D A + M + G P+ Y
Sbjct: 622 QKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTY 681
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
+L+D GR++ A ++ M C V +Y+ +++G CK E E AL+L M
Sbjct: 682 TSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEK 741
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
KG P+VV Y L L + +V+ +LF +M+ G A + TYR I+ C
Sbjct: 742 KGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCC 794
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 191/455 (41%), Gaps = 81/455 (17%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN-- 60
I + M+ +P P FN L + Y LF R+N+ G P YNI I
Sbjct: 328 IINMMMTEGCNPSPSL-FNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSI 386
Query: 61 ---------------------------------------CFCKMGRVSHGFVVLGRILRS 81
C C +G+ F ++ ++R
Sbjct: 387 CGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRK 446
Query: 82 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVA 141
F P+A T+T +I LC R+ +A LF +++ G P+V+TY LI+
Sbjct: 447 GFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILID----------- 495
Query: 142 LNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
F G +++A+ F +M+ +P+VVTYT+++ + + +A
Sbjct: 496 ------------SFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQAND 543
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG---------------- 245
+ M+ PN +T++ ++D LCK G++ +A + +I
Sbjct: 544 IFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDT 603
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
+ PN Y L++G C +V+ A +L +M + GC Y L++G+CK EI+ A
Sbjct: 604 ISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQ 663
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
++ M G P V Y +L +F+ +++ A K+ +M +D + TY +DGL
Sbjct: 664 EVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGL 723
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
CK +A+ L + C ++ Y LIDGL
Sbjct: 724 CKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGL 758
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 187/428 (43%), Gaps = 34/428 (7%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
FD M + SP V ++ L K+K +F R+ +P+ TY+ LI+ C
Sbjct: 510 FDEMRSAGCSPN-VVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLC 568
Query: 64 KMGRVSHGFVVLGRILRSC----------------FTPNAVTFTSLIKGLCAESRIMEAA 107
K G + V +++ + +PN VT+ +L+ GLC ++ +A
Sbjct: 569 KAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAH 628
Query: 108 ALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV---------- 157
L + GCEPN Y+ L++G + G A +F M V
Sbjct: 629 DLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRM 688
Query: 158 --EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNV 215
+G +D A ++ QM ++ NP+VVTYT+++ G C + +A LL M +G PNV
Sbjct: 689 FKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNV 748
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
VT+ ++D L K GK+D L M G PN Y L++ C G ++ A L
Sbjct: 749 VTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDE 808
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
M+ + Y + G+ +K +L L EM S P +Y L + +
Sbjct: 809 MKQTHWPKYLQGYRTTVQGF--SKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGR 866
Query: 336 VERAFKLFDEMQRDGVA---ADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
+E A +L EM + A + + I LC +S + EAV L+ +R D+ A
Sbjct: 867 LETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSA 926
Query: 393 YNCLIDGL 400
+ CL+ GL
Sbjct: 927 FVCLVKGL 934
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 169/383 (44%), Gaps = 33/383 (8%)
Query: 33 YDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTS 92
++ +S R+ P++ TY L+ F K ++ ++ ++ P+ F S
Sbjct: 287 FNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNS 346
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN 152
L+ C A LF ++ GC P YN I + G
Sbjct: 347 LVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSI-----------------CGR 389
Query: 153 GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
E +D A++++ +M + + + + R C + +A ++ EMM +G
Sbjct: 390 EELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFV 449
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
P+ T+ ++ LC+ ++D+A L M ++GV P+ + Y L+D FC G + +A+
Sbjct: 450 PDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSW 509
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
F M S GC+ V +Y+ L++ Y K+K++ A ++ M+ P+ + Y+ L L +
Sbjct: 510 FDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCK 569
Query: 333 IHQVERAFKL----------------FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
++++A ++ F+ D ++ + TY ++GLCK + +A +
Sbjct: 570 AGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHD 629
Query: 377 LFRTLRILKCELDIRAYNCLIDG 399
L + CE + Y+ L+DG
Sbjct: 630 LLDAMLAAGCEPNQIVYDALVDG 652
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 176/420 (41%), Gaps = 34/420 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L K K + + + G P +N L++ +C ++ + +
Sbjct: 304 PNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKL 363
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIME------AAALFTKLRVFGCEPNVFTYNTL 128
R+ P V + I +C + A ++ ++ V C N
Sbjct: 364 FNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANF 423
Query: 129 INGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENI 176
L G A + +EM + VDKA LF +MK +
Sbjct: 424 ARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGV 483
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
NPDV TYT +I FC A +A+ EM G PNVVT+ ++ K+ ++ +A+
Sbjct: 484 NPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQAND 543
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM----------------ESMG 280
+ M+ PNA Y+ L+DG C G + +A E++ + ++
Sbjct: 544 IFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDT 603
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
+ V +Y L+NG CK +++ A L ML+ G +P+ ++Y+ L ++ +++ A
Sbjct: 604 ISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQ 663
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++F M + G TY + ID + K+ + A+++ + C ++ Y ++DGL
Sbjct: 664 EVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGL 723
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 161/365 (44%), Gaps = 32/365 (8%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D ML P + ++ L K D+ +F R+ G P ++TY LI+
Sbjct: 630 LLDAMLAAGCEPNQIV-YDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRM 688
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K GR+ VL ++L+ PN VT+T+++ GLC +A L + + GC PNV
Sbjct: 689 FKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNV 748
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TY LI+GL G G VD ELF+QMK + P+ VT
Sbjct: 749 VTYTALIDGL-----------------------GKAGKVDAGLELFMQMKTKGCAPNYVT 785
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I C A ++A LL EM + + + K + + LL+ M
Sbjct: 786 YRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSK--RFLASLGLLEEME 843
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS---YSILINGYCKNK 299
P A VY L+D F GR+ A EL M + + + S ++ LI C +
Sbjct: 844 SHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSS 903
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++E A++LY EM +GI PD+ + L L E ++ A +L + ++GV W
Sbjct: 904 QVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEGV---NWEGN 960
Query: 360 TFIDG 364
F DG
Sbjct: 961 KFCDG 965
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 156/422 (36%), Gaps = 96/422 (22%)
Query: 33 YDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTS 92
+ L RL G P TYN L+ G+V F V + S F + T S
Sbjct: 185 WGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGS 244
Query: 93 LIKGLCAESR--------------------------IMEAA------ALFTKLRVFGCEP 120
+ LC E R +MEA+ + ++R P
Sbjct: 245 FAQALCKEGRWGDALDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIP 304
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
NV TY TL+ G + + K + M E NP
Sbjct: 305 NVVTYRTLLTGFLKKKQ-----------------------LGWCKRIINMMMTEGCNPSP 341
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN------------ 228
+ S++ +C A D+ A L M G P V +N+ + +C
Sbjct: 342 SLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLA 401
Query: 229 -----------------------------GKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
GK ++A +++ M++ G P+A Y ++
Sbjct: 402 EKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITF 461
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
C RV++A LF M+ +G V++Y+ILI+ +CK IE A S + EM S G P+
Sbjct: 462 LCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPN 521
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
VV Y L + Q+ +A +F M D + TY IDGLCK I +A E++
Sbjct: 522 VVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYA 581
Query: 380 TL 381
L
Sbjct: 582 KL 583
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 153/377 (40%), Gaps = 67/377 (17%)
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
VLGR+L L++ C + EA +L+ FG P+ TYN L+ L
Sbjct: 167 VLGRLL-----------NVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLA 215
Query: 134 RTGHTIVALNLFEEMASGN--------GEFGV----EGFVDKAKELFLQMKDENINPDVV 181
G +A + +EM++ G F EG A +L ++ E+ D V
Sbjct: 216 SAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDALDL---LEREDFKLDTV 272
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
T +I G A+ +NEA L M PNVVT+ ++ K ++ R++++M
Sbjct: 273 LCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMM 332
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G P+ ++N+L+ +C A +LF M + GC Y+I I C +E+
Sbjct: 333 MTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREEL 392
Query: 302 -----------------------------------------EGALSLYGEMLSKGIKPDV 320
E A + EM+ KG PD
Sbjct: 393 PNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDA 452
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
Y + L + +V++AF LF EM++ GV D +TY ID CK I +A F
Sbjct: 453 STYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDE 512
Query: 381 LRILKCELDIRAYNCLI 397
+R C ++ Y L+
Sbjct: 513 MRSAGCSPNVVTYTALL 529
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 94/250 (37%), Gaps = 11/250 (4%)
Query: 155 FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
G E A+ L ++ +++ + ++R C W EA L + D G +P+
Sbjct: 144 LGFEDPARTAERLLREIGEDDRDVLGRLLNVLVRRCCLQGLWGEALEELGRLKDFGYRPS 203
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF- 273
VT+N ++ L G+++ A R+ M G + + C GR A +L
Sbjct: 204 AVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDALDLLE 263
Query: 274 ---VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
++++ CT +I+G + A+S M P+VV Y TL
Sbjct: 264 REDFKLDTVLCTQ-------MISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGF 316
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
+ Q+ ++ + M +G + + + C A +LF + C
Sbjct: 317 LKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGY 376
Query: 391 RAYNCLIDGL 400
YN I +
Sbjct: 377 VVYNIFIGSI 386
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 118/385 (30%), Positives = 188/385 (48%), Gaps = 26/385 (6%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + FN+L K +F + GL P + ++N LI+ CK G V GF
Sbjct: 245 PPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFR 304
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ G + P+ TF++LI GLC E R+ E + LF ++ G PN T+ TLI+G
Sbjct: 305 LKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQC 364
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ G +AL F+ M + + + PD+VTY ++I G C
Sbjct: 365 KGGKVDLALKNFQMMLA-----------------------QGVRPDLVTYNALINGLCKV 401
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
D EA+ L+ EM G++P+ +TF ++D CK+G M+ A + M++ G+ + +
Sbjct: 402 GDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAF 461
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
L+ G C GRV+ A + M S G +Y+++I+ +CK +++ L EM S
Sbjct: 462 TALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQS 521
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
G P VV YN L L + Q++ A L D M GVA + TY +DG K+ V+
Sbjct: 522 DGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVD 581
Query: 374 AVELFRTLRILKCELDIRAYNCLID 398
V++F + + L D +Y L++
Sbjct: 582 -VDIFNSEKGLVT--DYASYTALVN 603
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 136/240 (56%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
++++ L+L++ D P + + ++ GFC A D A+ + E+ +G++P VV+FN
Sbjct: 229 IERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNT 288
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
++ CK+G ++E RL +M GV P+ F ++ L++G C GR++ LF M G
Sbjct: 289 LISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRG 348
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
+++ LI+G CK +++ AL + ML++G++PD+V YN L L ++ ++ A
Sbjct: 349 LVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 408
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+L +EM G+ D T+ T IDG CK+ + A+E+ R + ELD A+ LI GL
Sbjct: 409 RLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGL 468
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 142/296 (47%), Gaps = 23/296 (7%)
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVD 162
I + AL+ ++ G P ++ +N L++G + G V
Sbjct: 229 IERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGD-----------------------VG 265
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
A+ +F ++ + P VV++ ++I G C + D E L M +GV P+V TF+ ++
Sbjct: 266 NARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALI 325
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
+ LCK G++DE S L D M G+ PN + TL+DG C G+V+ A + F M + G
Sbjct: 326 NGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVR 385
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
+ +Y+ LING CK +++ A L EM + G+KPD + + TL + +E A ++
Sbjct: 386 PDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEI 445
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
M +G+ D + I GLC+ + +A + + + D Y +ID
Sbjct: 446 KRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVID 501
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
EIE + +LY E+L G P + +N L + V A +FDE+ + G+ ++
Sbjct: 228 EIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFN 287
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCE---LDIRAYNCLIDGL 400
T I G CK+ + E FR +++ E D+ ++ LI+GL
Sbjct: 288 TLISGCCKSGDVEEG---FRLKGVMESEGVCPDVFTFSALINGL 328
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 198/433 (45%), Gaps = 47/433 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + NI+ L K + D S+F+ ++ PD T+ LI+ K GRV + +
Sbjct: 303 PNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRI 362
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R+L + PN V +TSLI+ R + ++ ++ GC P++ NT ++ +++
Sbjct: 363 YERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFK 422
Query: 135 TGHTIVALNLFEEMAS-----GNGEFGV-------EGFVDKAKELFLQMKDENINPDVVT 182
G T LFEE+ + + + GF + EL+ MKD+ D
Sbjct: 423 AGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRA 482
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK--------------- 227
Y +VI GFC + N+A LL EM G P VVT+ ++D L K
Sbjct: 483 YNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAK 542
Query: 228 --------------------NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
G++DEA +++ M+Q G+ PN + +N L+DG +N
Sbjct: 543 SNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEIN 602
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A F SM+ + CT +Y ILING CK ++ A + EM +G+KP+ + Y +
Sbjct: 603 EALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMI 662
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
L + V +A LF+ + G D+ +Y I+GL + ++A +LF R+ C
Sbjct: 663 SGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCS 722
Query: 388 LDIRAYNCLIDGL 400
+ + L+D L
Sbjct: 723 IHTKTCVALLDAL 735
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 184/389 (47%), Gaps = 13/389 (3%)
Query: 23 LFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSC 82
L ++ D LSL + S D+ YN+ I+CF K+G+V + + +
Sbjct: 102 LIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANG 161
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
P+ VT+TS++ LC +R+ EA +F ++ P + YNT+I G G A
Sbjct: 162 LVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAY 221
Query: 143 NLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
+L E + G +G DKA +F +MK + + P++ TY +I
Sbjct: 222 SLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAM-PNLPTYNIIIGML 280
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C A + A + M + G+ PNV T N+++D LCK K+DEA + + M P+
Sbjct: 281 CKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDG 340
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
+ +L+DG GRV+ A ++ M V Y+ LI + K E +Y E
Sbjct: 341 ATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKE 400
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M+ G PD+++ NT +F+ + E+ LF+E++ G DT +Y I L K +
Sbjct: 401 MMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGF 460
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDG 399
E EL+ ++ C LD RAYN +IDG
Sbjct: 461 ARETYELYYAMKDQGCVLDTRAYNTVIDG 489
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 179/393 (45%), Gaps = 13/393 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+N+ C K D F + + GL PD TY ++ CK R+ + ++
Sbjct: 134 YNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQME 193
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
++ P A + ++I G + + EA +L + R GC P+V YN ++ L + G T
Sbjct: 194 QNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTD 253
Query: 140 VALNLFEEMASGN-----------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
AL +FEEM G G V+ A ++ MK+ + P+V T +I
Sbjct: 254 KALRIFEEMKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMID 313
Query: 189 GFCYANDWNEAKCLLIEMMDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
C A +EA C + E MD V P+ TF ++D L K G++D+A R+ + M+
Sbjct: 314 RLCKAQKLDEA-CSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQI 372
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
PN VY +L+ F R +++ M GC+ + + ++ K E E +L
Sbjct: 373 PNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRAL 432
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
+ E+ ++G PD Y+ L L + ++L+ M+ G DT Y T IDG CK
Sbjct: 433 FEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCK 492
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + +A +L ++ + + Y ++DGL
Sbjct: 493 SGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGL 525
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 180/395 (45%), Gaps = 19/395 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNIL---FGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILI 59
I++ ML+ P V +++ F C K + ++K + +G PDL N +
Sbjct: 362 IYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGH----KMYKEMMRSGCSPDLMLLNTYM 417
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 119
+C K G G + I F P+ +++ LI L E L+ ++ GC
Sbjct: 418 DCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCV 477
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE-----FG--VEGF-----VDKAKEL 167
+ YNT+I+G ++G A L EEM + +G V+G +D+A L
Sbjct: 478 LDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYML 537
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
F + K I + V Y+S+I GF +EA ++ EMM +G+ PNV T+N ++D L K
Sbjct: 538 FEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVK 597
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
+++EA M + PN Y L++G C + N+A + M+ G +
Sbjct: 598 AEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTIT 657
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y+ +I+G K+ + A SL+ + G PD YN + L ++ A++LF+E +
Sbjct: 658 YTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETR 717
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
G + T T +D L K + +A + LR
Sbjct: 718 LKGCSIHTKTCVALLDALHKAECLEQAAIVGAVLR 752
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 142/327 (43%), Gaps = 24/327 (7%)
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+LG + + F P T L+ +++EA L +R F P Y TLI L
Sbjct: 13 ILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALS 72
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
G + D+ LF QM++ +V T++IR F
Sbjct: 73 EVGES-----------------------DRMLALFNQMQELGYEVNVHLLTTLIRVFSRE 109
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+ A LL EM ++V +NV +D K GK+D A + M G+ P+ Y
Sbjct: 110 GRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTY 169
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
++M C R++ A E+F ME ++Y+ +I GY + + A SL +
Sbjct: 170 TSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRA 229
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG P VV YN + L + + ++A ++F+EM+RD + + TY I LCK +
Sbjct: 230 KGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEA 288
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A ++ ++ ++R N +ID L
Sbjct: 289 AFKVRDAMKEAGLFPNVRTINIMIDRL 315
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 53/129 (41%)
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
+++ M G T ++ L+ K++++ A L M +P Y TL
Sbjct: 11 EQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGA 70
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
L E+ + +R LF++MQ G + T I + + A+ L ++ + D
Sbjct: 71 LSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDAD 130
Query: 390 IRAYNCLID 398
I YN ID
Sbjct: 131 IVLYNVCID 139
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 128/439 (29%), Positives = 198/439 (45%), Gaps = 56/439 (12%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNS-TGLFPDLYTYNILINCFCKMGRVSHGFVVL 75
V +FN + LA+ + + ++ + + PD+ TY IL+N CK GRV VL
Sbjct: 136 VFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVL 195
Query: 76 GRILRSCFT--PNAVTFTSLIKGLCAESRIMEAAALFTKLR---VFGCEPNVFTYNTLIN 130
+ R P+ VT +++ GLC R+ EA A F + R V GC PN TYN LI+
Sbjct: 196 DGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALA-FVEQRMSSVHGCPPNTVTYNCLID 254
Query: 131 GLYRTGHTIVALNLFEEMA--------------------SGNGEFGVEGFVDK------- 163
R G+ +A L E+M +G +E F +K
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEG 314
Query: 164 ----------------------AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
A ELF + E +PD + Y ++I G A +A
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACS 374
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
+ M + G + + +N+++ C+ ++ EA LL M ++G+RP+ YNTL+ G C
Sbjct: 375 MASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSC 434
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
G EL M GC +V ++ L++GYCK +I+ AL + M GI P+ V
Sbjct: 435 KAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNV 494
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
IYNTL L + V+ A +LFDEM+ V A+ T+ + GL + +A EL +
Sbjct: 495 IYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQM 554
Query: 382 RILKCELDIRAYNCLIDGL 400
R +C D + L++ L
Sbjct: 555 REERCFPDYVTVDVLMEWL 573
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 154/328 (46%), Gaps = 14/328 (4%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG-- 71
PP ++N L + + L +++ + G+ ++ T N ++ C+ GR
Sbjct: 243 PPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALE 302
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
F R + NAVT+++L+ L + + A LF + G P+ Y T+I+G
Sbjct: 303 FFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISG 362
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPD 179
L + G A ++ M + + + + +A EL +MK+ I PD
Sbjct: 363 LTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPD 422
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
V TY +++ G C A D+ LL +M+D G QP+V+TF ++ CK GK+DEA R+L
Sbjct: 423 VCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILR 482
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M + G+ PN +YNTL+D C G V+ A ELF M+ V +++ L+ G
Sbjct: 483 SMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKN 542
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLF 327
E A L +M + PD V + L
Sbjct: 543 MPEKAFELMDQMREERCFPDYVTVDVLM 570
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 126/433 (29%), Positives = 203/433 (46%), Gaps = 47/433 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + NI+ L K K D S+F+ +N PD T+ LI+ K GRV + +
Sbjct: 440 PNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRL 499
Query: 75 LGRILRSCFTPNAVTFTSLIK---------------------GLCAESRIMEA------- 106
++L S PNAV +TSLIK G + R++ A
Sbjct: 500 YEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFK 559
Query: 107 -------AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------- 152
ALF +++ G P+V +Y+ LI+GL + G LF M
Sbjct: 560 AGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHA 619
Query: 153 -----GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
F G V+KA +L +MK + P VVTY SVI G + +EA L E
Sbjct: 620 YNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 679
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
G++ NVV ++ ++D K G++DEA +++ ++Q G+ PN + +N L+D +N
Sbjct: 680 SNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEIN 739
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A F +M+++ T +YSILING C+ ++ A + EM +G+KP+ + Y T+
Sbjct: 740 EALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMI 799
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
L + + A LF+ + +G D+ +Y I+GL + +EA ++F R+ C
Sbjct: 800 AGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCN 859
Query: 388 LDIRAYNCLIDGL 400
+ + L+D L
Sbjct: 860 IHTKTCIALLDAL 872
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 199/437 (45%), Gaps = 47/437 (10%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC------- 63
+ + P + ++N+L L K + + + GLFP++ T NI+I+ C
Sbjct: 401 KDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDE 460
Query: 64 ----------------------------KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 95
K GRV + + ++L S PNAV +TSLIK
Sbjct: 461 ACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIK 520
Query: 96 GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEF 155
R + +F ++ GC P++ N ++ +++ G T LFEE+ S
Sbjct: 521 SFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIP 580
Query: 156 GV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
V GF + ELF MK++ D Y + I GFC + N+A LL
Sbjct: 581 DVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLL 640
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
EM +G QP VVT+ ++D L K ++DEA L + G+ N +Y++L+DGF
Sbjct: 641 EEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKV 700
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
GR++ A + + G T V++++ L++ K +EI AL + M + P+ + Y
Sbjct: 701 GRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITY 760
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
+ L L + + +AF + EMQ+ G+ +T TY T I GL K I EA LF +
Sbjct: 761 SILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKA 820
Query: 384 LKCELDIRAYNCLIDGL 400
D +YN +I+GL
Sbjct: 821 NGGVPDSASYNAIIEGL 837
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 179/392 (45%), Gaps = 13/392 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F + A+ D LSL + S L D+ YN+ I+CF K G+V + I
Sbjct: 236 FTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIK 295
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
P+ VT+TS+I LC +R+ EA +F ++ P + YNT+I G G
Sbjct: 296 SHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFD 355
Query: 140 VALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
A +L E + G +G + +A F +MK ++ P++ TY +I
Sbjct: 356 EAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMK-KDAAPNLSTYNVLI 414
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
C A + A + M + G+ PNV+T N+++D LCK K+DEA + + M
Sbjct: 415 DMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICS 474
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P+ + +L+DG GRV+ A L+ M Y+ LI + K E +
Sbjct: 475 PDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKI 534
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
+ EM+ +G PD+ + N +F+ + + LF+E++ G D +Y I GL K
Sbjct: 535 FKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVK 594
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ E ELF ++ C LD AYN IDG
Sbjct: 595 AGFARETYELFYAMKEQGCVLDTHAYNTFIDG 626
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 185/393 (47%), Gaps = 13/393 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+N+ C K D F + S GL PD TY +I CK R+ + ++
Sbjct: 271 YNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQME 330
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
++ P A + ++I G + + EA +L + + GC P+V YN ++ L + G
Sbjct: 331 QNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLG 390
Query: 140 VALNLFEEM----ASGNGEFGV-------EGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
AL FEEM A + V G V+ A ++ MK+ + P+V+T +I
Sbjct: 391 EALRTFEEMKKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMID 450
Query: 189 GFCYANDWNEAKCLLIEMMDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
C A +EA C + E M+ + P+ VTF ++D L K G++D+A RL + M+
Sbjct: 451 RLCKAKKLDEA-CSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKI 509
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
PNA VY +L+ F GR ++F M GC+ + + ++ K E +L
Sbjct: 510 PNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRAL 569
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
+ E+ S+G PDV+ Y+ L L + ++LF M+ G DT Y TFIDG CK
Sbjct: 570 FEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCK 629
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + +A +L ++ + + Y +IDGL
Sbjct: 630 SGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGL 662
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 186/407 (45%), Gaps = 20/407 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNIL---FGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILI 59
+++ ML+ P V +++ F C K + +FK + G PDL N +
Sbjct: 499 LYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGH----KIFKEMIHRGCSPDLRLLNAYM 554
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 119
+C K G G + I F P+ ++++ LI GL E LF ++ GC
Sbjct: 555 DCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCV 614
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE-----FG--VEGF-----VDKAKEL 167
+ YNT I+G ++G A L EEM + + +G ++G +D+A L
Sbjct: 615 LDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYML 674
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
F + K + +VV Y+S+I GF +EA ++ E+M +G+ PNV T+N ++D L K
Sbjct: 675 FEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 734
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
+++EA M + PN Y+ L++G C + N+A + M+ G +
Sbjct: 735 AEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTIT 794
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y+ +I G K I A SL+ + G PD YN + L + A+K+F+E +
Sbjct: 795 YTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETR 854
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR-ILKCELDIRAY 393
G T T +D L K+ + +A + LR I K + R++
Sbjct: 855 MKGCNIHTKTCIALLDALQKDECLEQAAIVGAVLREIAKSQHAARSW 901
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 164/383 (42%), Gaps = 29/383 (7%)
Query: 21 NILFGCLAKNKHYDTVLSLFK---RLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGR 77
+++ G L + K + +S F+ R L P+ Y +L+ K + + +LG
Sbjct: 96 DLVIGVLRRAKDVNQAISYFRWTERKTDQALCPEAYDSLLLV--MAKNVKFDYFEQILGE 153
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
+ + F P+ T LI +++ E L +R F P Y TLI L
Sbjct: 154 MSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQE 213
Query: 138 TIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
+ + L LF +M E G E V +T+VIR F +
Sbjct: 214 SDIMLTLFHQMQ----ELGYE-------------------VSVHLFTTVIRVFAREGRLD 250
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
A LL EM + ++V +NV +D K GK+D A + + G+ P+ Y +++
Sbjct: 251 AALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMI 310
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
C R++ A E+F ME ++Y+ +I GY + + A SL ++G
Sbjct: 311 GVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCI 370
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
P V+ YN + L + ++ A + F+EM++D A + TY ID LCK + A ++
Sbjct: 371 PSVIAYNCILTCLGKKGRLGEALRTFEEMKKDA-APNLSTYNVLIDMLCKAGEVEAAFKV 429
Query: 378 FRTLRILKCELDIRAYNCLIDGL 400
++ ++ N +ID L
Sbjct: 430 RDAMKEAGLFPNVMTVNIMIDRL 452
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 117/371 (31%), Positives = 189/371 (50%), Gaps = 17/371 (4%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI- 78
+N L + + V LF + G+ PD+ TY+ +IN +MG V VL ++
Sbjct: 246 YNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMF 305
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
LR C +PN TFTSL+KG R+ EA L+ ++ G EPN YNTLI+GL G
Sbjct: 306 LRGC-SPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKM 364
Query: 139 IVALNLFEEMASGNGEFG--------VEGFVDK-----AKELFLQMKDENINPDVVTYTS 185
+ A+++ ++M NG F ++GF A E++ +M P+VV YT
Sbjct: 365 VEAVSVSQKMER-NGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTC 423
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
++ C + +N A L+ M + PN +TFN + LC +GK + A ++L+ M Q G
Sbjct: 424 MVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYG 483
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
PN YN ++DG R A ++ +E M + +Y+ +++G+C +GAL
Sbjct: 484 CAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGAL 543
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA-ADTWTYRTFIDG 364
+ G++L G KPD + YNT+ + +V+ A +L D + + G D +TY + + G
Sbjct: 544 QIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWG 603
Query: 365 LCKNSYIVEAV 375
+C + EAV
Sbjct: 604 VCNWIGVDEAV 614
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 183/386 (47%), Gaps = 28/386 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N + L + + ++ + G+ ++YTYN+L+ CK RV +
Sbjct: 141 PSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKL 200
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P+AV++T+++ +C ++ EA L +++ F V YN LING R
Sbjct: 201 LAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSF-----VPVYNALINGFCR 255
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
E +++ ELF +M E I+PDV+TY++VI
Sbjct: 256 -----------------------EHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMG 292
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ A +L +M +G PNV TF +M G++ EA L + MIQ G PN YN
Sbjct: 293 NVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYN 352
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+ G C G++ A + ME G +YS LI+G+ K ++ GA ++ +M++
Sbjct: 353 TLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITN 412
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G P+VV+Y + VL A L + M +T T+ TFI GLC + A
Sbjct: 413 GCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWA 472
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+++ +R C ++ YN ++DGL
Sbjct: 473 MKVLNQMRQYGCAPNVTTYNEVLDGL 498
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 187/383 (48%), Gaps = 28/383 (7%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++N+L L KN D L ++ G PD +Y +++ C++G+V +
Sbjct: 178 VYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSM 237
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
RI F P + +LI G C E ++ E LF ++ V G +P+V TY+T+IN L G
Sbjct: 238 RI--KSFVP---VYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMG 292
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+ +AL + +M FL+ +P+V T+TS+++G+
Sbjct: 293 NVEMALAVLAKM-------------------FLR----GCSPNVHTFTSLMKGYFMGGRL 329
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
EA L M+ +G +PN V +N ++ LC GKM EA + M + GV PN Y+TL
Sbjct: 330 CEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTL 389
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DGF G + A E++ M + GC V Y+ +++ C+N AL L M +
Sbjct: 390 IDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNC 449
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
P+ + +NT L + E A K+ ++M++ G A + TY +DGL EA++
Sbjct: 450 PPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQ 509
Query: 377 LFRTLRILKCELDIRAYNCLIDG 399
+ + ++ + ++ YN ++ G
Sbjct: 510 IVGEIEEMEIKSNLVTYNTILSG 532
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 155/335 (46%), Gaps = 13/335 (3%)
Query: 10 MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS 69
+R P V +F L L L+ R+ G P+ YN LI+ C G++
Sbjct: 306 LRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMV 365
Query: 70 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
V ++ R+ PN T+++LI G ++ A+ ++ K+ GC PNV Y ++
Sbjct: 366 EAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMV 425
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENIN 177
+ L R AL+L E MA+GN G + A ++ QM+
Sbjct: 426 DVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCA 485
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P+V TY V+ G A EA ++ E+ + ++ N+VT+N I+ C G A ++
Sbjct: 486 PNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQI 545
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT-VFSYSILINGYC 296
++ G +P++ YNT++ +C G V A +L + G + VF+Y+ L+ G C
Sbjct: 546 AGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVC 605
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
++ A+ +M+++GI P+ +N L LF
Sbjct: 606 NWIGVDEAVVHLDKMINEGICPNRATWNALVRGLF 640
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 147/318 (46%), Gaps = 28/318 (8%)
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
F +T+T++IK L E I L +++ G N + +IN R G AL
Sbjct: 69 FKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQAL 128
Query: 143 NLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
F + GEFG + P V Y V+ N + +
Sbjct: 129 KTFYRI----GEFGCK-------------------PSVKIYNHVLDALLSENKFQMINGI 165
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
M G++ NV T+N+++ LCKN ++D A +LL M G P+A Y T++ C
Sbjct: 166 YNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCR 225
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G+V A+EL + ++S V Y+ LING+C+ ++E L+ EM +GI PDV+
Sbjct: 226 LGKVEEARELSMRIKSF-----VPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVIT 280
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
Y+T+ L E+ VE A + +M G + + T+ + + G + EA++L+ +
Sbjct: 281 YSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMI 340
Query: 383 ILKCELDIRAYNCLIDGL 400
E + AYN LI GL
Sbjct: 341 QEGSEPNTVAYNTLIHGL 358
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 138/302 (45%), Gaps = 24/302 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ L AK ++ ++ + G P++ Y +++ C+ +H +
Sbjct: 381 PNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHL 440
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + PN +TF + IKGLC + A + ++R +GC PNV TYN +++GL+
Sbjct: 441 IENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFN 500
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
T AL + E +++ I ++VTY +++ GFC+A
Sbjct: 501 AKRTREALQIVGE-----------------------IEEMEIKSNLVTYNTILSGFCHAG 537
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV-RPNAFVY 253
+ A + +++ G +P+ +T+N ++ CK G++ A +L+D + + G P+ F Y
Sbjct: 538 MFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTY 597
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
+L+ G C V+ A M + G +++ L+ G G + + +L+
Sbjct: 598 TSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSKLGHLGPIHIVDNILA 657
Query: 314 KG 315
G
Sbjct: 658 NG 659
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 181/385 (47%), Gaps = 6/385 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ + G L + LF+ + G+ PD+Y Y LI+ FCK G +
Sbjct: 220 PDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNW 279
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R PN VT+T+LI ++ +A ++ + GC PN+ TY LI+GL +
Sbjct: 280 FDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCK 339
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G A +++ M N E + F + + P+V TY +++ G C A
Sbjct: 340 AGKIEKASQIYKIMKKENVE------IPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAY 393
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EA+ LL M +G +PN V ++ ++D CK GK+DEA + M++ G PN + Y+
Sbjct: 394 QVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYS 453
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L+D R++ A ++ M C V Y+ +I+G CK + + A L M K
Sbjct: 454 SLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEK 513
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G P+VV Y + + +VE+ +L +M G A + TYR I+ C + EA
Sbjct: 514 GCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEA 573
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+L ++ + Y +I+G
Sbjct: 574 HKLLEEMKQTYWPRHVAGYRKVIEG 598
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 192/406 (47%), Gaps = 43/406 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC----KMGRVSH 70
P + + L + ++ + R+ ++ P++ TY IL+ C C K+GR
Sbjct: 40 PDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILL-CGCLNKEKLGRCKR 98
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
++ I C+ P+ F SL+ C A L K+ GC+P YN LI
Sbjct: 99 ILSMM--ITEGCY-PSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIG 155
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
G+ + E + +D A++ + +M + + + V ++ R
Sbjct: 156 GICSS------------------EEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCL 197
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C + +A ++ EMM +G P+ T++ ++ LC K+++A +L M + G+ P+
Sbjct: 198 CGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDV 257
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
+VY TL+D FC G + +A+ F ME GC V +Y+ LI+ Y K++++ A +Y
Sbjct: 258 YVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEM 317
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV-----------------AA 353
MLSKG P++V Y L L + ++E+A +++ M+++ V
Sbjct: 318 MLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEP 377
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ +TY +DGLCK + EA +L +++ + CE + Y+ LIDG
Sbjct: 378 NVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDG 423
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 206/446 (46%), Gaps = 62/446 (13%)
Query: 4 FDYMLNMRPSP--PPVCSFNILF-GCLAKNK--HYDTVLSLFKRLNSTGLFPDLYTYNIL 58
D++ MR S P V ++ IL GCL K K +LS+ + + G +P +N L
Sbjct: 62 MDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSM---MITEGCYPSPRIFNSL 118
Query: 59 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC---------------AESRI 103
++ +C+ G ++ + +L ++++ P V + LI G+C A +
Sbjct: 119 VHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEM 178
Query: 104 MEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN----------- 152
+EA + K+ N+ ++ + G+ G A N+ EM S
Sbjct: 179 LEAGVVLNKV-------NISNFSRCLCGI---GKFEKAYNVIREMMSKGFIPDTSTYSKV 228
Query: 153 -GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
G V+KA +LF +MK I PDV YT++I FC A +A+ EM G
Sbjct: 229 IGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGC 288
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
PNVVT+ ++ K+ K+ +A+ + ++M+ G PN Y L+DG C G++ +A +
Sbjct: 289 APNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQ 348
Query: 272 LFVSMESM---------------GCTH--TVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
++ M+ G ++ VF+Y L++G CK +++ A L M +
Sbjct: 349 IYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVE 408
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G +P+ V+Y+ L + +++ A ++F M G + +TY + ID L K+ + A
Sbjct: 409 GCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLA 468
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+++ + C ++ Y +IDGL
Sbjct: 469 LKVLSKMLENSCAPNVVIYTEMIDGL 494
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 160/363 (44%), Gaps = 31/363 (8%)
Query: 43 LNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 102
+++ G D +T + CK G+ +L + F P+ V +T +I GLC S
Sbjct: 1 MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLEK---EEFVPDTVLYTKMISGLCEASL 57
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVD 162
EA T++R C PNV TY L+ G LN + +
Sbjct: 58 FEEAMDFLTRMRASSCLPNVLTYRILLCG---------CLN--------------KEKLG 94
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
+ K + M E P + S++ +C + D+ A LL +M+ G QP V +N+++
Sbjct: 95 RCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILI 154
Query: 223 DELCKN---GK--MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
+C + GK +D A + M++ GV N + C G+ +A + M
Sbjct: 155 GGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMM 214
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
S G +YS +I C ++E A L+ EM GI PDV +Y TL + +E
Sbjct: 215 SKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIE 274
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+A FDEM+RDG A + TY I K+ + +A E++ + C +I Y LI
Sbjct: 275 QARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALI 334
Query: 398 DGL 400
DGL
Sbjct: 335 DGL 337
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 176/396 (44%), Gaps = 35/396 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L K++ +++ + S G P++ TY LI+ CK G++ +
Sbjct: 290 PNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQI 349
Query: 75 LGRILR------------------SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF 116
+I++ + PN T+ +L+ GLC ++ EA L + V
Sbjct: 350 Y-KIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVE 408
Query: 117 GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKA 164
GCEPN Y+ LI+G + G A +F M + V + +D A
Sbjct: 409 GCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLA 468
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
++ +M + + P+VV YT +I G C +EA L++ M ++G PNVVT+ ++D
Sbjct: 469 LKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDG 528
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
K+G++++ LL M G PN Y L++ C TG ++ A +L M+
Sbjct: 529 FGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRH 588
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
V Y +I G+ N+E +L L E+ P +Y L + ++E A +L +
Sbjct: 589 VAGYRKVIEGF--NREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNE 646
Query: 345 EMQRDG--VAADTWTYRTFIDGLCKNSYIVEAVELF 378
E+ AA+ + T I+ L +A EL+
Sbjct: 647 ELSSFSPFSAANQNIHITLIENLSLAHKADKAFELY 682
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 161/354 (45%), Gaps = 47/354 (13%)
Query: 40 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
F+ ++ P+++TY L++ CK +V +L + PN V + +LI G C
Sbjct: 367 FRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCK 426
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE- 158
++ EA +FT + G +PNV+TY++LI+ L++ +AL + +M + V
Sbjct: 427 AGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVI 486
Query: 159 -----------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
G D+A +L + M+++ NP+VVTYT++I GF + + LL +M
Sbjct: 487 YTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMS 546
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI-------GVR------------- 247
+G PN VT+ V+++ C G +DEA +LL+ M Q G R
Sbjct: 547 SKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREFIAS 606
Query: 248 -------------PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS--YSILI 292
P A VY L+D F GR+ A EL + S + LI
Sbjct: 607 LYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLI 666
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+ + A LY +M+S+G P++ I L L +++ E A +L D +
Sbjct: 667 ENLSLAHKADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLLDSI 720
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 20/213 (9%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ + P V ++ + K+ + L L ++++S G P+ TY +LIN C G
Sbjct: 509 MMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTG 568
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE--PNVFT 124
+ +L + ++ + + + +I+G E A+L+ + + P
Sbjct: 569 LLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREF----IASLYLSFEISENDSVPVAPV 624
Query: 125 YNTLINGLYRTGHTIVALNLFEEMASGNG--------------EFGVEGFVDKAKELFLQ 170
Y LI+ + G +AL L EE++S + + DKA EL+
Sbjct: 625 YRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIENLSLAHKADKAFELYAD 684
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
M P++ +I+G N W EA LL
Sbjct: 685 MISRGSIPELSILVHLIKGLLRVNRWEEALQLL 717
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 173/327 (52%), Gaps = 23/327 (7%)
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
VL R L P+ +T+T LI+ CAES + +A L ++ GC+P+V TYN L+NG+
Sbjct: 3 VLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMC 62
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ EG +D+A + M P+V+T+ ++R C
Sbjct: 63 K-----------------------EGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCST 99
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
W +A+ LL EM+ +G P+VVTFN++++ LC+ G + A +L+ M G PN+ Y
Sbjct: 100 GRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSY 159
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N L+ GFC +++RA + M S GC + +Y+ ++ CK+ +++ A+ L ++ S
Sbjct: 160 NPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSS 219
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG P ++ YNT+ L ++ + ++A +L EM+ G+ D TY + I GL + + E
Sbjct: 220 KGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEE 279
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A++ F + + + YN ++ GL
Sbjct: 280 AIKFFHDVEGFGVKPNAFTYNSIMFGL 306
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 170/367 (46%), Gaps = 23/367 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ IL + L + S G PD+ TYN+L+N CK GR+
Sbjct: 14 PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + PN +T +++ +C+ R M+A L T++ GC P+V T+N LIN L R
Sbjct: 74 LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G A+++ E+M + P+ ++Y ++ GFC
Sbjct: 134 KGLLGRAIDILEKMPT-----------------------HGCTPNSLSYNPLLHGFCKEK 170
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ A L M+ +G P++VT+N ++ LCK+GK+D A LL+ + G P YN
Sbjct: 171 KMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYN 230
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
T++DG G+ ++A EL M G V +YS LI G + ++E A+ + ++
Sbjct: 231 TVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGF 290
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+KP+ YN++ L + Q +RA M G +Y I+G+ EA
Sbjct: 291 GVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEA 350
Query: 375 VELFRTL 381
+EL L
Sbjct: 351 LELLNEL 357
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 157/321 (48%), Gaps = 12/321 (3%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P V ++N+L + K D + + S G P++ T+NI++ C GR
Sbjct: 42 MGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGR 101
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+L ++R +P+ VTF LI LC + + A + K+ GC PN +YN
Sbjct: 102 WMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNP 161
Query: 128 LINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDEN 175
L++G + A+ E M S +G VD A EL Q+ +
Sbjct: 162 LLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKG 221
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+P ++TY +VI G ++A LL EM +G++P+V+T++ ++ L + GK++EA
Sbjct: 222 CSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAI 281
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+ + GV+PNAF YN++M G C + +RA + M S GC T SY+ILI G
Sbjct: 282 KFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGI 341
Query: 296 CKNKEIEGALSLYGEMLSKGI 316
+ AL L E+ S+G+
Sbjct: 342 ANEGLAKEALELLNELCSRGV 362
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 192/389 (49%), Gaps = 20/389 (5%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
++K + +LF + ++GL P Y LI +C+ V G+ +L + + +
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
T+ +++KG+C+ + A + ++ GC PNV Y TLI + A+ + +
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 147 EMASGNGEFGVEGFV----------------DKAKELFLQMKDENINPDVVTYTSVIRGF 190
EM E G+ + D+A+ ++M + + P+ TY + I G+
Sbjct: 477 EMK----EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
A+++ A + EM + GV PN V +++E CK GK+ EA M+ G+ +A
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDA 592
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
Y LM+G +V+ A+E+F M G VFSY +LING+ K ++ A S++ E
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M+ +G+ P+V+IYN L ++E+A +L DEM G+ + TY T IDG CK+
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ EA LF +++ D Y L+DG
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 201/413 (48%), Gaps = 22/413 (5%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFG-CLAKN--KHYDTVLSLFKRLNSTGLFPDLYTYNIL 58
+FD M+ P +++ G C KN + Y+ ++ + KR + YTY +
Sbjct: 368 ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKR----NIVISPYTYGTV 423
Query: 59 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC 118
+ C G + + ++ ++ S PN V +T+LIK SR +A + +++ G
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN--------GEFGVEGFVD-----KAK 165
P++F YN+LI GL + A + EM G F + G+++ A
Sbjct: 484 APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF-ISGYIEASEFASAD 542
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
+ +M++ + P+ V T +I +C EA M+DQG+ + T+ V+M+ L
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
KN K+D+A + M G+ P+ F Y L++GF G + +A +F M G T V
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
Y++L+ G+C++ EIE A L EM KG+ P+ V Y T+ + + AF+LFDE
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
M+ G+ D++ Y T +DG C+ + + A+ +F T + C +N LI+
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALIN 774
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 189/442 (42%), Gaps = 59/442 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +N L L+K K D S + GL P+ +TY I+ + + +
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKY 544
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + PN V T LI C + +++EA + + + G + TY L+NGL++
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK 604
Query: 135 TGHTIVALNLFEEMASGNG------EFGV--EGF-----VDKAKELFLQMKDENINPDVV 181
A +F EM G G +GV GF + KA +F +M +E + P+V+
Sbjct: 605 NDKVDDAEEIFREM-RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y ++ GFC + + +AK LL EM +G+ PN VT+ I+D CK+G + EA RL D M
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV---------------- 285
G+ P++FVY TL+DG C V RA +F GC +
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKT 782
Query: 286 -----------------------FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
+Y+I+I+ CK +E A L+ +M + + P V+
Sbjct: 783 ELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVIT 842
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
Y +L ++ + F +FDE G+ D Y I+ K +A+ L +
Sbjct: 843 YTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMF 902
Query: 383 ILK-----CELDIRAYNCLIDG 399
C+L I L+ G
Sbjct: 903 AKNAVDDGCKLSISTCRALLSG 924
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 167/382 (43%), Gaps = 55/382 (14%)
Query: 41 KRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 100
K + G+ P+ LIN +CK G+V ++ +A T+T L+ GL
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605
Query: 101 SRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN-------- 152
++ +A +F ++R G P+VF+Y LING + G+ A ++F+EM
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 153 ----GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD 208
G F G ++KAKEL +M + ++P+ VTY ++I G+C + D EA L EM
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL 725
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEA---------------------------------- 234
+G+ P+ + ++D C+ ++ A
Sbjct: 726 KGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELK 785
Query: 235 ----SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+RL+D +PN YN ++D C G + AKELF M++ TV +Y+
Sbjct: 786 TEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTS 845
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM---- 346
L+NGY K ++ E ++ GI+PD ++Y+ + + +A L D+M
Sbjct: 846 LLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKN 905
Query: 347 -QRDGVAADTWTYRTFIDGLCK 367
DG T R + G K
Sbjct: 906 AVDDGCKLSISTCRALLSGFAK 927
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 166/369 (44%), Gaps = 44/369 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +L L + D ++K + + D+ TY++LI C+ G V G V
Sbjct: 184 PRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDV 243
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + F + +K ES I + G P +TY+ LI+GL +
Sbjct: 244 LFKTEKE-FRTATLNVDGALK--LKESMICK-----------GLVPLKYTYDVLIDGLCK 289
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
++ AK L ++M ++ D TY+ +I G
Sbjct: 290 IKR-----------------------LEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGR 326
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ + AK L+ EM+ G+ ++ + + K G M++A L D MI G+ P A Y
Sbjct: 327 NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYA 386
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L++G+C V + EL V M+ + ++Y ++ G C + +++GA ++ EM++
Sbjct: 387 SLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS 446
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK------- 367
G +P+VVIY TL + + A ++ EM+ G+A D + Y + I GL K
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Query: 368 NSYIVEAVE 376
S++VE VE
Sbjct: 507 RSFLVEMVE 515
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 147/325 (45%), Gaps = 20/325 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+ +L +K + S+F + GL P++ YN+L+ FC+ G + +
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + PNAVT+ ++I G C + EA LF ++++ G P+ F Y TL++G R
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Query: 135 TGHTIVALNLF----EEMASGNGEFGVE-------GFVDKAKELFLQMKDENIN----PD 179
A+ +F + AS F G + E+ ++ D + + P+
Sbjct: 745 LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN 804
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
VTY +I C + AK L +M + + P V+T+ +++ K G+ E + D
Sbjct: 805 DVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFD 864
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM-----GCTHTVFSYSILING 294
I G+ P+ +Y+ +++ F G +A L M + GC ++ + L++G
Sbjct: 865 EAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSG 924
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPD 319
+ K E+E A + M+ PD
Sbjct: 925 FAKVGEMEVAEKVMENMVRLQYIPD 949
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 21/179 (11%)
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
G + V F ++ D ++EA + + + + P L+D R++
Sbjct: 146 GKSDDGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCK--------------NKE-------IEGALSLY 308
+++ M V +Y +LI +C+ KE ++GAL L
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
M+ KG+ P Y+ L L +I ++E A L EM GV+ D TY IDGL K
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK 324
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 190/387 (49%), Gaps = 11/387 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ + G L + LFK + TG+ PD+YTY ILI+CF K G +
Sbjct: 487 PDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNW 546
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++R P VT+T+LI ++ A LF + GC PNV TY LI+G +
Sbjct: 547 LDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCK 606
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI--NPDVVTYTSVIRGFCY 192
+G+ A ++ M G+ + +++ ++K+ N+ P+VVTY +++ G C
Sbjct: 607 SGNIEKACQIYARM---RGDADIPDV-----DMYFKIKN-NVAEKPNVVTYGALVDGLCK 657
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
A+ +A+ LL M G +PN + ++ ++D CK K+DEA + M++ G PN +
Sbjct: 658 AHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYT 717
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
Y++L+D R++ ++ M C + Y+ +I+G K + + A L M
Sbjct: 718 YSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMME 777
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
KG KP+VV Y + + +V++ +LF EM G A + TY I+ C ++
Sbjct: 778 EKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLD 837
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDG 399
EA L ++ + +Y +I+G
Sbjct: 838 EAYALLEEMKQTYWPKHVSSYCKVIEG 864
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 185/439 (42%), Gaps = 67/439 (15%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L K K LF+ + + G FP++ TY LI+ +CK G + +
Sbjct: 557 PTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQI 616
Query: 75 LGRILRSC----------------FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC 118
R+ PN VT+ +L+ GLC ++ +A L + V GC
Sbjct: 617 YARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGC 676
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV--------EGFVDKAKELFLQ 170
EPN Y+ LI+G + A +F +M V F DK +L L+
Sbjct: 677 EPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLK 736
Query: 171 ----MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
M + + P++V YT +I G +EA L++ M ++G +PNVVT+ ++D
Sbjct: 737 VLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFG 796
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM---------- 276
K GK+D+ L M G PN Y L++ C TG ++ A L M
Sbjct: 797 KAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVS 856
Query: 277 -----------------------ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
E G + Y +LI+ + K +E AL L+ E++S
Sbjct: 857 SYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVIS 916
Query: 314 KGIK--PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
+ +Y +L ++ AF+LF +M RDGV D T+ + GL +
Sbjct: 917 ASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRW 976
Query: 372 VEAVELFRTLRILKCELDI 390
EA++L +L C++DI
Sbjct: 977 EEALQLSDSL----CQMDI 991
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/459 (24%), Positives = 189/459 (41%), Gaps = 77/459 (16%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC----KMGRVSH 70
P +N + L + ++ + R+ ST P++ TY IL+ C C ++GR
Sbjct: 306 PNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILL-CGCLNKKQLGRCKR 364
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
++ I C+ P+ F SL+ C A L K+ C+P YN LI
Sbjct: 365 ILSMM--IAEGCY-PSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIG 421
Query: 131 GLYRTGHTI------VALNLFEEMAS------------------GNGEFG---------- 156
+ G +A + EM S G G+F
Sbjct: 422 SICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMM 481
Query: 157 -------------VEGF------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
V GF V+ A LF +MK + PDV TYT +I F A
Sbjct: 482 GNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIK 541
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
+A L EM+ G +P VVT+ ++ K K+ A+ L +LMI G PN Y L+
Sbjct: 542 QAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALI 601
Query: 258 DGFCLTGRVNRAKELFVSME----------------SMGCTHTVFSYSILINGYCKNKEI 301
DG+C +G + +A +++ M ++ V +Y L++G CK ++
Sbjct: 602 DGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKV 661
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A L M G +P+ ++Y+ L + +++ A ++F +M G + +TY +
Sbjct: 662 KDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSL 721
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
ID L K+ + +++ + C +I Y +IDGL
Sbjct: 722 IDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGL 760
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 154/391 (39%), Gaps = 32/391 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L + DT + + ++ GL D +T CK+G+
Sbjct: 239 PTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREA--- 295
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L I + F PN + + +I GLC S EA ++R C PNV TY L+ G
Sbjct: 296 LSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLN 355
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ + K + M E P + S++ +C ++
Sbjct: 356 KKQ-----------------------LGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSD 392
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM------DEASRLLDLMIQIGVRP 248
D++ A LL +M +P V +N+++ +C G++ + A + + M+ G
Sbjct: 393 DFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVL 452
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
N + C G+ +A ++ M G +YS +I C +E A L+
Sbjct: 453 NKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLF 512
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
EM G+ PDV Y L + +++A DEM RDG TY T I K
Sbjct: 513 KEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKA 572
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ A ELF + C ++ Y LIDG
Sbjct: 573 KKVSVANELFELMIAKGCFPNVITYTALIDG 603
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 138/321 (42%), Gaps = 15/321 (4%)
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS-- 150
LI+ C A +L+ FG +P TYN L+ R A + EM+
Sbjct: 212 LIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELG 271
Query: 151 -GNGEFGVEGF------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
EF + F V K +E ++ E+ P+ + Y +I G C A+ + EA L
Sbjct: 272 LSMDEFTLGFFAQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFL 331
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
M PNV T+ +++ ++ R+L +MI G P+ ++N+L+ +C +
Sbjct: 332 NRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKS 391
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL------YGEMLSKGIK 317
+ A +L ME C Y+ILI C E+ G ++ Y EMLS G
Sbjct: 392 DDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTV 451
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
+ V + L + E+A+K+ EM +G DT TY I LC S + A L
Sbjct: 452 LNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFL 511
Query: 378 FRTLRILKCELDIRAYNCLID 398
F+ ++ D+ Y LID
Sbjct: 512 FKEMKGTGVVPDVYTYTILID 532
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 106/240 (44%), Gaps = 23/240 (9%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ + P V ++ + K D L LF+ + S G P+ TY +LIN C G
Sbjct: 775 MMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATG 834
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ + +L + ++ + + ++ +I+G E + + L ++ G P + Y
Sbjct: 835 HLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKRE--FILSLGLLEEVEKNGSAPIILLYK 892
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
LI+ + G VAL L +E+ S + + +N+ YTS+
Sbjct: 893 VLIDNFVKAGRLEVALELHKEVISASMSMAAK---------------KNL------YTSL 931
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I F YA+ A L +M+ GV P++ TF ++ L + + +EA +L D + Q+ +
Sbjct: 932 IYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDI 991
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 84/215 (39%), Gaps = 3/215 (1%)
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+IR C WN A L + D G +P +T+N ++ + K+D A + M ++G
Sbjct: 212 LIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELG 271
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
+ + F C G+ A L +E Y+ +I+G C+ E A+
Sbjct: 272 LSMDEFTLGFFAQALCKVGKWREALSL---IEKEDFVPNTILYNKMISGLCEASFFEEAM 328
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
M S P+V Y L Q+ R ++ M +G + + +
Sbjct: 329 DFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAY 388
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
CK+ A +L + + +C+ YN LI +
Sbjct: 389 CKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSI 423
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 9/167 (5%)
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
NV++ + C+NG + A L + G +P YN L+ F +++ A+ + M
Sbjct: 209 LNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMS 268
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
+G + F+ CK + ALSL + + P+ ++YN + L E E
Sbjct: 269 ELGLSMDEFTLGFFAQALCKVGKWREALSL---IEKEDFVPNTILYNKMISGLCEASFFE 325
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
A + M+ + TYR + G C N +L R RIL
Sbjct: 326 EAMDFLNRMRSTSCIPNVQTYRILLCG-CLNKK-----QLGRCKRIL 366
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 7/160 (4%)
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS--YSILINGYCKNKE 300
QIG VY L+D F G +R E F+ E G V ++LI C+N
Sbjct: 164 QIGYDHTPAVYIALLDVF-ERGSYDRVPEEFLR-EIRGDDKEVLGKLLNVLIRKCCRNGL 221
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
AL G + G KP + YN L V +++ A + EM G++ D +T
Sbjct: 222 WNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGF 281
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
F LCK EA+ L + + YN +I GL
Sbjct: 282 FAQALCKVGKWREALSLIEKEDFVPNTI---LYNKMISGL 318
>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
Length = 628
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 185/373 (49%), Gaps = 18/373 (4%)
Query: 46 TGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME 105
+G PD+ TYN I+ CK G++ G +L + R P+ VTF S+I GLC +RI +
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDD 240
Query: 106 AAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------- 152
A +F + GC P+ TY+ +++ L R + E M +
Sbjct: 241 AFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAF 300
Query: 153 -GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
G G AK + L M + P++++Y VI G C + + ++A L +M+D G
Sbjct: 301 IGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGC 360
Query: 212 -QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV-RPNAFVYNTLMDGFCLTGRVNRA 269
+P+V+ FN ++ CK G++ +A +LL M + P+ YNTL+DG G + +A
Sbjct: 361 CKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQA 420
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
K L M+++GC V +Y+ LINGY K+ E A SL+ EM +KG PD++ YNT+
Sbjct: 421 KLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSA 480
Query: 330 LFEIHQVERAFKLFDEMQRDG--VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
+ + +A ++ +++ + D TYR IDG C+ + + L + +
Sbjct: 481 FSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWS 540
Query: 388 LDIRAYNCLIDGL 400
D YN LI L
Sbjct: 541 CDSYTYNVLIAKL 553
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 197/426 (46%), Gaps = 64/426 (15%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L L K + + KR+ +G PDL TYN LI+ C R+ +V
Sbjct: 43 PNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLV 102
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG---------------CE 119
L ++R+ F PN +T+++L+ C R+ +A L ++ + G CE
Sbjct: 103 LQELVRNGFAPNHITYSTLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCE 162
Query: 120 ----------------------PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV 157
P+V TYNT I+GL + G L + EEM G
Sbjct: 163 ARCQSSRYECRDGDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG------ 216
Query: 158 EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
I PDVVT+ S+I G C AN ++A + M+++G P+ +T
Sbjct: 217 -----------------GIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLT 259
Query: 218 FNVIMDELCKNGKMDEASRLLDLM--IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
+++++D L + ++D +L+ M ++ G + +N + C +G+ AK + +
Sbjct: 260 YSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLG 319
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG-IKPDVVIYNTLFVVLFEIH 334
M G + SY+ +I+G CK+ ++ A L +ML G KPDV+ +NTL +
Sbjct: 320 MIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAG 379
Query: 335 QVERAFKLFDEMQRDGV-AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
++ +A +L EM+ + D TY T IDG K + +A L + ++ + C+ ++ Y
Sbjct: 380 RLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTY 439
Query: 394 NCLIDG 399
LI+G
Sbjct: 440 AALING 445
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 176/353 (49%), Gaps = 31/353 (8%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNS--TGLFPDLYTYNIL 58
F +F ML R P +++I+ L++ DTV + + + + G ++YT+N
Sbjct: 242 FQVFKGMLE-RGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAF 300
Query: 59 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC 118
I C+ G+ +L ++ S PN +++ +I GLC + +A L K+ GC
Sbjct: 301 IGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGC 360
Query: 119 -EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENIN 177
+P+V +NTLI+G + G + +A +L ++MK +NI
Sbjct: 361 CKPDVIFFNTLISGFCKAGR-----------------------LSQAHQLLIEMKAKNIC 397
Query: 178 -PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
PDVVTY ++I G +AK LL EM G +PNVVT+ +++ K+G +EA
Sbjct: 398 VPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAES 457
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG--CTHTVFSYSILING 294
L D M G P+ YNT++ F G +++A+ ++ +++ C+ +Y ILI+G
Sbjct: 458 LFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDG 517
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV-ERAFKLFDEM 346
YC+ ++ E L+L EM ++G D YN L L E +V +A ++ +M
Sbjct: 518 YCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQM 570
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 143/289 (49%), Gaps = 31/289 (10%)
Query: 117 GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI 176
G + +V TY TLI+GL ++G +D A+ L +M D
Sbjct: 5 GYDASVVTYTTLIDGLCKSGD-----------------------LDAAQALLQKMADAGC 41
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
P+VVTYT++I G C A ++A + M+ G +P++VT+N ++ LC +MD+A
Sbjct: 42 APNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGL 101
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+L +++ G PN Y+TL+ C R+++A+ L M G + Y I G+C
Sbjct: 102 VLQELVRNGFAPNHITYSTLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFC 161
Query: 297 KNKEIEGALSLY-----GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
E S Y EM+ G PDVV YNT L + ++++ ++ +EM R G+
Sbjct: 162 ---EARCQSSRYECRDGDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGI 218
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D T+ + I GLCK + I +A ++F+ + C D Y+ ++D L
Sbjct: 219 PPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNL 267
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 24/198 (12%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L AK+ Y+ SLF +++ G FPD+ TYN +++ F K G +S V
Sbjct: 434 PNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGV 493
Query: 75 LGRILR--SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
++ S +P+A+T+ LI G C + L ++ G + +TYN LI L
Sbjct: 494 YQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKL 553
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
T EE+ S KA ++ QM D++ P + S++R F
Sbjct: 554 AET----------EEVPS------------KALAVYQQMLDQDCVPSASIFNSLVRLFLR 591
Query: 193 ANDWNEAKCLLIEMMDQG 210
D N A+ ++ EM ++G
Sbjct: 592 TGDVNSARSMVQEMNEKG 609
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 189/401 (47%), Gaps = 17/401 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S +L K+ + S R+ GLFP+ YN LI+C CK G ++
Sbjct: 27 PDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLCKAGMLAEAESY 86
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R+ + C PN V++ +I G C I +A A ++ G P Y++++ +
Sbjct: 87 LKRMPQHC-APNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCK 145
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
TG+ A+++F EM + E + F + +A+ELF M PDVVT
Sbjct: 146 TGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVT 205
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G C +EA LL M + V P VT+ ++D LCK ++ +A + + M
Sbjct: 206 YNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMA 265
Query: 243 QIGVRP---NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
+ G P A+ L++G C R AKE+F M G + TV +Y+ L+ G
Sbjct: 266 E-GPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTA 324
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
+++ A+ L ML + P++ Y L L + QVE AFKL M+ G +
Sbjct: 325 KLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWE 384
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ L + + +A EL++ + + C+ + + N L+DG+
Sbjct: 385 VLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGI 425
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 175/359 (48%), Gaps = 15/359 (4%)
Query: 38 SLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 97
++ + + G PD+ ++ +LI F K G G L R+L + PNA+ + +LI L
Sbjct: 15 AIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCL 74
Query: 98 CAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM--------- 148
C + EA + ++ C PNV +YN +I+G + + AL EM
Sbjct: 75 CKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTP 133
Query: 149 ---ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
+S F G V KA ++F +M + PD+V + ++ G A +EA+ L
Sbjct: 134 HAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRS 193
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M +G +P+VVT+N ++ LCK K+DEA LL+ M Q V P Y TL+D C R
Sbjct: 194 MNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFAR 253
Query: 266 VNRAKELFVSMES--MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
+ +A E+F M CT +S ILING CK + A ++ EM +GI P VV Y
Sbjct: 254 LQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTY 313
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
NTL L +++ A +L M A + +TY I LCK + EA +L +R
Sbjct: 314 NTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMR 372
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 27/339 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +FN+L L + + LF+ +NS G PD+ TYN +I CK ++ +
Sbjct: 166 PDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFL 225
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC---EPNVFTYNTLING 131
L R+ + +P VT+T+LI LC +R+ +A +F K+ C EP ++ LING
Sbjct: 226 LERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEP-AYSVLILING 284
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
L + A GE AKE+F +M+ I+P VVTY +++ G
Sbjct: 285 LCK--------------ARRPGE---------AKEMFQEMRGRGISPTVVTYNTLLEGLL 321
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
+A L M+DQ PN+ T+ +++ LCK +++EA +LL M G P+
Sbjct: 322 STAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLK 381
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
++ L+ GR++ A EL+ M + C V S +IL++G + ++ A +M
Sbjct: 382 IWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQM 441
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
GI PD Y+ L V L + ++A KL +E+ RDG
Sbjct: 442 TDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 153/304 (50%), Gaps = 24/304 (7%)
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG 153
I+ L + +A A+ +++ G P+V ++ LI G +++G + + M
Sbjct: 1 IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAG- 59
Query: 154 EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
LF P+ + Y ++I C A EA+ L + M Q P
Sbjct: 60 -------------LF---------PNAILYNNLISCLCKAGMLAEAESYL-KRMPQHCAP 96
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
NVV++N+I+D CK +++A L M ++G P Y++++ FC TG V++A ++F
Sbjct: 97 NVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVF 156
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
M + GC + ++++L++G + ++I A L+ M S+G KPDVV YNT+ L +
Sbjct: 157 AEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKW 216
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
+++ A L + M+++ V+ TY T ID LCK + + +A E+F + C AY
Sbjct: 217 KKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAY 276
Query: 394 NCLI 397
+ LI
Sbjct: 277 SVLI 280
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 134/311 (43%), Gaps = 27/311 (8%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+N R P V ++N + L K K D + L +R+ + P TY LI+ CK R
Sbjct: 194 MNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFAR 253
Query: 68 VSHGFVVLGRILR---SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFT 124
+ + V ++ C P A + LI GLC R EA +F ++R G P V T
Sbjct: 254 LQQAYEVFEKMAEGPCPCTEP-AYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVT 312
Query: 125 YNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
YNTL+ GL T + A EL M D+ P++ TY
Sbjct: 313 YNTLLEGLLSTAK-----------------------LQDAMELTYFMLDQVPAPNMFTYE 349
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+I C + EA LL M D+G P++ + V++ L + G++D+A L M +I
Sbjct: 350 ILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRI 409
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
+ N L+DG G V+ AK+ M G F+Y L+ G C + + A
Sbjct: 410 NCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQA 469
Query: 305 LSLYGEMLSKG 315
L E++ G
Sbjct: 470 RKLVEELVRDG 480
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 105/214 (49%), Gaps = 1/214 (0%)
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
IR A+ +A+ ++ EM G P+V + +++ K+G LD M++ G+
Sbjct: 1 IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
PNA +YN L+ C G + A E ++ C V SY+I+I+GYCK + IE AL+
Sbjct: 61 FPNAILYNNLISCLCKAGMLAEA-ESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALA 119
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
EM G P Y+++ + V +A +F EM G D + + GL
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 179
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ I EA ELFR++ C+ D+ YN +I GL
Sbjct: 180 RARKIHEARELFRSMNSRGCKPDVVTYNTMIAGL 213
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 192/389 (49%), Gaps = 20/389 (5%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
++K + +LF + ++GL P Y LI +C+ V G+ +L + + +
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
T+ +++KG+C+ + A + ++ GC PNV Y TLI + A+ + +
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 147 EMASGNGEFGVEGFV----------------DKAKELFLQMKDENINPDVVTYTSVIRGF 190
EM E G+ + D+A+ ++M + + P+ TY + I G+
Sbjct: 477 EMK----EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
A+++ A + EM + GV PN V +++E CK GK+ EA M+ G+ +A
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDA 592
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
Y LM+G +V+ A+E+F M G VFSY +LING+ K ++ A S++ E
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M+ +G+ P+V+IYN L ++E+A +L DEM G+ + TY T IDG CK+
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ EA LF +++ D Y L+DG
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 201/413 (48%), Gaps = 22/413 (5%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFG-CLAKN--KHYDTVLSLFKRLNSTGLFPDLYTYNIL 58
+FD M+ P +++ G C KN + Y+ ++ + KR + YTY +
Sbjct: 368 ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKR----NIVISPYTYGTV 423
Query: 59 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC 118
+ C G + + ++ ++ S PN V +T+LIK SR +A + +++ G
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN--------GEFGVEGFVD-----KAK 165
P++F YN+LI GL + A + EM G F + G+++ A
Sbjct: 484 APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF-ISGYIEASEFASAD 542
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
+ +M++ + P+ V T +I +C EA M+DQG+ + T+ V+M+ L
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
KN K+D+A + M G+ P+ F Y L++GF G + +A +F M G T V
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
Y++L+ G+C++ EIE A L EM KG+ P+ V Y T+ + + AF+LFDE
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
M+ G+ D++ Y T +DG C+ + + A+ +F T + C +N LI+
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALIN 774
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 189/442 (42%), Gaps = 59/442 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +N L L+K K D S + GL P+ +TY I+ + + +
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKY 544
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + PN V T LI C + +++EA + + + G + TY L+NGL++
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK 604
Query: 135 TGHTIVALNLFEEMASGNG------EFGV--EGF-----VDKAKELFLQMKDENINPDVV 181
A +F EM G G +GV GF + KA +F +M +E + P+V+
Sbjct: 605 NDKVDDAEEIFREM-RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y ++ GFC + + +AK LL EM +G+ PN VT+ I+D CK+G + EA RL D M
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV---------------- 285
G+ P++FVY TL+DG C V RA +F GC +
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKT 782
Query: 286 -----------------------FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
+Y+I+I+ CK +E A L+ +M + + P V+
Sbjct: 783 ELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVIT 842
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
Y +L ++ + F +FDE G+ D Y I+ K +A+ L +
Sbjct: 843 YTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMF 902
Query: 383 ILK-----CELDIRAYNCLIDG 399
C+L I L+ G
Sbjct: 903 AKNAVDDGCKLSISTCRALLSG 924
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 167/382 (43%), Gaps = 55/382 (14%)
Query: 41 KRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 100
K + G+ P+ LIN +CK G+V ++ +A T+T L+ GL
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605
Query: 101 SRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN-------- 152
++ +A +F ++R G P+VF+Y LING + G+ A ++F+EM
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 153 ----GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD 208
G F G ++KAKEL +M + ++P+ VTY ++I G+C + D EA L EM
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL 725
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEA---------------------------------- 234
+G+ P+ + ++D C+ ++ A
Sbjct: 726 KGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELK 785
Query: 235 ----SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+RL+D +PN YN ++D C G + AKELF M++ TV +Y+
Sbjct: 786 TEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTS 845
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM---- 346
L+NGY K ++ E ++ GI+PD ++Y+ + + +A L D+M
Sbjct: 846 LLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKN 905
Query: 347 -QRDGVAADTWTYRTFIDGLCK 367
DG T R + G K
Sbjct: 906 AVDDGCKLSISTCRALLSGFAK 927
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 166/369 (44%), Gaps = 44/369 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +L L + D ++K + + D+ TY++LI C+ G V G V
Sbjct: 184 PRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDV 243
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + F + +K ES I + G P +TY+ LI+GL +
Sbjct: 244 LFKTEKE-FRTATLNVDGALK--LKESMICK-----------GLVPLKYTYDVLIDGLCK 289
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
++ AK L ++M ++ D TY+ +I G
Sbjct: 290 IKR-----------------------LEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGR 326
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ + AK L+ EM+ G+ ++ + + K G M++A L D MI G+ P A Y
Sbjct: 327 NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYA 386
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L++G+C V + EL V M+ + ++Y ++ G C + +++GA ++ EM++
Sbjct: 387 SLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS 446
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK------- 367
G +P+VVIY TL + + A ++ EM+ G+A D + Y + I GL K
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Query: 368 NSYIVEAVE 376
S++VE VE
Sbjct: 507 RSFLVEMVE 515
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 147/325 (45%), Gaps = 20/325 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+ +L +K + S+F + GL P++ YN+L+ FC+ G + +
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + PNAVT+ ++I G C + EA LF ++++ G P+ F Y TL++G R
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Query: 135 TGHTIVALNLF----EEMASGNGEFGVE-------GFVDKAKELFLQMKDENIN----PD 179
A+ +F + AS F G + E+ ++ D + + P+
Sbjct: 745 LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN 804
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
VTY +I C + AK L +M + + P V+T+ +++ K G+ E + D
Sbjct: 805 DVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFD 864
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM-----GCTHTVFSYSILING 294
I G+ P+ +Y+ +++ F G +A L M + GC ++ + L++G
Sbjct: 865 EAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSG 924
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPD 319
+ K E+E A + M+ PD
Sbjct: 925 FAKVGEMEVAEKVMENMVRLQYIPD 949
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 189/386 (48%), Gaps = 9/386 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ + G L D LF+ + S + PD++TY ILI+ FCK+G +
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++R PN VT+T+LI ++ A LF + GC PNV TY LI+G +
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI-NPDVVTYTSVIRGFCYA 193
+G A ++ M GN + +++ ++ D NI +P++ TY +++ G C A
Sbjct: 598 SGQIEKACQIYARM-RGNADI-------PDVDMYFKIDDGNIRDPNIFTYGALVDGLCKA 649
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+ EA+ LL M +G +PN + ++ ++D CK GK+DEA + M + G PN + Y
Sbjct: 650 HKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTY 709
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
++L+D R++ A ++ M C V Y+ +I+G CK + + A L M
Sbjct: 710 SSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEE 769
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG P+VV Y + + +V++ +L +M G A + TYR I+ C + +
Sbjct: 770 KGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDD 829
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
A +L ++ + Y +I+G
Sbjct: 830 AHQLLDEMKQTYWPKHMAGYRKVIEG 855
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 180/389 (46%), Gaps = 39/389 (10%)
Query: 26 CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTP 85
CL ++ S+ + + S G PD TY+ +I C +V + F++ + + P
Sbjct: 454 CLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVP 513
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
+ T+T LI C + +A F ++ GC PNV TY LI+ +
Sbjct: 514 DVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKA---------- 563
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
+M+S N ELF M E P+VVTYT++I G C + +A +
Sbjct: 564 RKMSSAN-------------ELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR 610
Query: 206 M--------------MDQG--VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
M +D G PN+ T+ ++D LCK K+ EA LLD+M G PN
Sbjct: 611 MRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN 670
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
VY+ L+DGFC G+++ A+ +F M G V++YS LI+ K+K ++ AL +
Sbjct: 671 HIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLS 730
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
ML P+V+IY + L ++ + + A++L M+ G + TY IDG K
Sbjct: 731 RMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAG 790
Query: 370 YIVEAVELFRTLRILKCELDIRAYNCLID 398
+ + +EL R + C + Y LI+
Sbjct: 791 KVDKCLELMRQMGAKGCAPNFVTYRVLIN 819
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 194/454 (42%), Gaps = 72/454 (15%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L + DT + + ++ +G D YT ++ CK GR
Sbjct: 230 PSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA--- 286
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY--------- 125
L I + F + V +T +I GLC S EA +++R C PNV TY
Sbjct: 287 LALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLR 346
Query: 126 --------------------------NTLINGLYRTGHTIVALNLFEEMAS--------- 150
N+LI+ R+G A L ++M
Sbjct: 347 KRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVV 406
Query: 151 ---------GNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
GN + ++ A++ + +M D ++ + V +++ R C A + +A
Sbjct: 407 YNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYS 466
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
++ EMM +G P+ T++ ++ LC K+D A L + M V P+ F Y L+D FC
Sbjct: 467 IIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFC 526
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
G + +A++ F M GC V +Y+ LI+ Y K +++ A L+ MLS+G P+VV
Sbjct: 527 KVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVV 586
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT----------------WTYRTFIDGL 365
Y L + Q+E+A +++ M+ + D +TY +DGL
Sbjct: 587 TYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGL 646
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
CK + EA +L + + CE + Y+ LIDG
Sbjct: 647 CKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDG 680
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 194/434 (44%), Gaps = 38/434 (8%)
Query: 4 FDYMLNMRPSP--PPVCSFNILF-GCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
D++ MR S P V ++ IL GCL K + + + + G +P +N LI+
Sbjct: 319 MDFLSRMRSSSCIPNVVTYRILLCGCLRK-RQLGRCKRILSMMITEGCYPSRRIFNSLIH 377
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG--C 118
+C+ G S+ + +L ++ P V + LI G+C ++ L + +G
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEML 437
Query: 119 EPNVFTYNTLINGLYR----TGHTIVALNLFEEMASGN------------GEFGVEGFVD 162
+ +V ++ L R G A ++ EM S G VD
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
A LF +MK ++ PDV TYT +I FC +A+ EM+ G PNVVT+ ++
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALI 557
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
K KM A+ L ++M+ G PN Y L+DG C +G++ +A +++ M
Sbjct: 558 HAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADI 617
Query: 283 HTV----------------FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
V F+Y L++G CK +++ A L M +G +P+ ++Y+ L
Sbjct: 618 PDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDAL 677
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
++ +++ A +F +M G + +TY + ID L K+ + A+++ + C
Sbjct: 678 IDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSC 737
Query: 387 ELDIRAYNCLIDGL 400
++ Y +IDGL
Sbjct: 738 APNVIIYTEMIDGL 751
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 147/357 (41%), Gaps = 54/357 (15%)
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN 152
LI+ C A +L+ G +P+ TYN L+ A + EM+
Sbjct: 203 LIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSG 262
Query: 153 GEFGVEGF-----------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
F ++G+ + +E ++ E D V YT +I G C A+ + EA
Sbjct: 263 --FNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMD 320
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
L M PNVVT+ +++ + ++ R+L +MI G P+ ++N+L+ +C
Sbjct: 321 FLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYC 380
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI-------------------- 301
+G + A +L M GC Y+ILI G C N+++
Sbjct: 381 RSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAH 440
Query: 302 ---------------------EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
E A S+ EM+SKG PD Y+ + +L +V+ AF
Sbjct: 441 VVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAF 500
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
LF+EM+ + V D +TY ID CK + +A + F + C ++ Y LI
Sbjct: 501 LLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALI 557
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 97/243 (39%), Gaps = 4/243 (1%)
Query: 159 GFVDKAKELFL-QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
G D+ E FL +++DE+ +IR C WN A L + D G +P+ +T
Sbjct: 175 GGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLT 234
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
+N ++ + ++D A + M G + + + C GR A L E
Sbjct: 235 YNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEE 294
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
TV Y+ +I+G C+ E A+ M S P+VV Y L Q+
Sbjct: 295 FK--LDTVI-YTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLG 351
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
R ++ M +G + + I C++ A +L + + C+ YN LI
Sbjct: 352 RCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILI 411
Query: 398 DGL 400
G+
Sbjct: 412 GGI 414
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 16/207 (7%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ + P V ++ + K D L L +++ + G P+ TY +LIN C G
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAG 825
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ +L + ++ + + + +I+G E I + L ++ P + Y
Sbjct: 826 LLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYR 883
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNG--------------EFGVEGFVDKAKELFLQMK 172
LI+ + G +AL L +EM+S + VDKA EL+ M
Sbjct: 884 ILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMI 943
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEA 199
P++ + +++G N W EA
Sbjct: 944 KRGGIPELSIFFYLVKGLIRINRWEEA 970
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 125/432 (28%), Positives = 198/432 (45%), Gaps = 47/432 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + + L LA+ + + VL LF L + G+ PD Y Y +++ C C++ + +
Sbjct: 188 PEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEI 247
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + + + + VT+ I GLC R+ EA + L G + ++ TY TL+ GL R
Sbjct: 248 INQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCR 307
Query: 135 TGHTIVALNLFEEMASGN---GEFGVEGFVDK---------AKELFLQMKDENINPDVVT 182
V + + +EM E V G ++ A EL ++ + P++
Sbjct: 308 IQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFV 367
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S+I C EA+ L M ++G+ PN VT+ +++D + K+D A + MI
Sbjct: 368 YNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMI 427
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ + YN++++ C G++ A+ LF M G TV +Y+ LI+GYCK+ +
Sbjct: 428 ECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVP 487
Query: 303 GALSLYGEMLSKGIKPDVVIYNTL-------------------------------FVVLF 331
A LY EM KGI P+ V + L + VL
Sbjct: 488 KAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLI 547
Query: 332 EIHQVE----RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
E H E RAF+L DEM + G++ DT+TYR I GLC + EA E L
Sbjct: 548 EGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQR 607
Query: 388 LDIRAYNCLIDG 399
LD Y L+ G
Sbjct: 608 LDELCYTALLQG 619
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 203/444 (45%), Gaps = 47/444 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M+ + P ++ G L K + L ++ G+ P+L+ YN +IN
Sbjct: 317 MMDEMIELGYVPSEAAVSGLIEG-LIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSL 375
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G++ ++ + PN VT+T LI G +++ A F K+ G V
Sbjct: 376 CKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATV 435
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
++YN++IN + G +A LF+EM + V +G V KA +L+ +
Sbjct: 436 YSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHE 495
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + I P+ VT+T++I G C N EA L EM++ + PN VT+NV+++ C+ G
Sbjct: 496 MTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGN 555
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
A LLD MI+ G+ P+ + Y L+ G C TGRV+ AKE + Y+
Sbjct: 556 TTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTA 615
Query: 291 LINGYCKNKEIEGAL----------------------------------SLYGEMLSKGI 316
L+ G+CK I+ AL L EM KG+
Sbjct: 616 LLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGM 675
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+PD VIY L + +++AF+ + M +G ++ TY ++GL K Y+ EA
Sbjct: 676 QPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKL 735
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
LF+ + + + + Y C +D L
Sbjct: 736 LFKRMLVGEAIPNHITYGCFLDHL 759
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 180/384 (46%), Gaps = 17/384 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+ ++ P V ++N+L + + L + GL PD YTY LI
Sbjct: 527 LFDEMVELKILPNEV-TYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGL 585
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C GRVS + + + + +T+L++G C E RI EA ++ G + ++
Sbjct: 586 CSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDL 645
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNG--------EFGVEGFVD-----KAKELFL 169
+Y LI+G I+ L EM G G ++GF+ KA E +
Sbjct: 646 VSYAVLISGALNQNDRIL-FELLREM-HGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWY 703
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
M E P+ VTYT+++ G A NEAK L M+ PN +T+ +D L K G
Sbjct: 704 IMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEG 763
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
M+ A +L + M+Q G N YN L+ G+C G+ A +L M +G +YS
Sbjct: 764 NMENALQLHNAMLQ-GSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYS 822
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
I YCK ++ A+ ++ ML +G+KPD V++N L +++RA +L ++M
Sbjct: 823 TFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLR 882
Query: 350 GVAADTWTYRTFIDGLCKNSYIVE 373
G+ TY + + L + + + +
Sbjct: 883 GLKPTQSTYHSLMVQLAQRARLTQ 906
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 191/396 (48%), Gaps = 20/396 (5%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F++L +NK + + + GL P++ T + L+N ++ + + ++
Sbjct: 158 FDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 217
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+ P+ +T ++K LC +A + + GC ++ TYN INGL ++
Sbjct: 218 NAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVW 277
Query: 140 VALNLFEEMASGNGEFGVEGFV------------DKAKELFLQMKDENIN----PDVVTY 183
A+ E+ GE G++ + + E+ ++M DE I P
Sbjct: 278 EAV----EVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAV 333
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
+ +I G A LL ++ GV PN+ +N +++ LCK GK++EA L +M +
Sbjct: 334 SGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAE 393
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G+ PN Y L+DGF +++ A F M G + TV+SY+ +IN CK +++
Sbjct: 394 RGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKM 453
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A L+ EM+ KG+KP V Y +L + V +AFKL+ EM G+A +T T+ I
Sbjct: 454 AELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALIC 513
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
GLC+ + + EA +LF + LK + YN LI+G
Sbjct: 514 GLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEG 549
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 180/441 (40%), Gaps = 80/441 (18%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V S+N + C K LFK + GL P + TY LI+ +CK G V F +
Sbjct: 435 VYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYH 494
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ PN VTFT+LI GLC +++ EA+ LF ++ PN TYN LI G R G
Sbjct: 495 EMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREG 554
Query: 137 HTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
+T A L +EM G V +AKE + ++ D + YT
Sbjct: 555 NTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYT 614
Query: 185 SVIRGFCYANDWNEAKC----------------------------------LLIEMMDQG 210
++++GFC EA LL EM +G
Sbjct: 615 ALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKG 674
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
+QP+ V + +++D K+G + +A +MI G PN+ Y L++G G VN AK
Sbjct: 675 MQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAK 734
Query: 271 ELFVSM---ESM-------------------------------GCTHTVFSYSILINGYC 296
LF M E++ G +Y+ILI GYC
Sbjct: 735 LLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTVTYNILIRGYC 794
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
+ + + A L M+ G+ PD + Y+T + V+ A +++ M + G+ D
Sbjct: 795 QIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRV 854
Query: 357 TYRTFIDGLCKNSYIVEAVEL 377
+ I C N + A++L
Sbjct: 855 VFNFLIHACCLNGELDRALQL 875
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 172/397 (43%), Gaps = 14/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L K+ L+ + G+ P+ T+ LI C++ +++ +
Sbjct: 468 PTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKL 527
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ PN VT+ LI+G C E A L ++ G P+ +TY LI GL
Sbjct: 528 FDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCS 587
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
TG A ++ + F EG + +A +M + D+V+
Sbjct: 588 TGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVS 647
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I G ND + LL EM +G+QP+ V + +++D K+G + +A +MI
Sbjct: 648 YAVLISGALNQNDRILFE-LLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMI 706
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G PN+ Y L++G G VN AK LF M +Y ++ K +E
Sbjct: 707 GEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNME 766
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL L+ ML +G + V YN L +I + + A KL D M G+ D TY TFI
Sbjct: 767 NALQLHNAML-QGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFI 825
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
CK + A++++ + + D +N LI
Sbjct: 826 YEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHA 862
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 98/195 (50%)
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M D G+ P V T + +++ L + K + L D ++ GV+P+ ++Y ++ C
Sbjct: 181 MRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKD 240
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
N+AKE+ E GC+ ++ +Y++ ING CK+K + A+ + + KG+K D+V Y T
Sbjct: 241 FNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCT 300
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L + L I + E ++ DEM G I+GL K I A EL + L
Sbjct: 301 LVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLG 360
Query: 386 CELDIRAYNCLIDGL 400
++ YN +I+ L
Sbjct: 361 VVPNLFVYNSMINSL 375
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 189/386 (48%), Gaps = 9/386 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ + G L D LF+ + S + PD++TY ILI+ FCK+G +
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++R PN VT+T+LI ++ A LF + GC PNV TY LI+G +
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI-NPDVVTYTSVIRGFCYA 193
+G A ++ M GN + +++ ++ D NI +P++ TY +++ G C A
Sbjct: 598 SGQIEKACQIYARM-RGNADI-------PDVDMYFKIDDGNIRDPNIFTYGALVDGLCKA 649
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+ EA+ LL M +G +PN + ++ ++D CK GK+DEA + M + G PN + Y
Sbjct: 650 HKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTY 709
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
++L+D R++ A ++ M C V Y+ +I+G CK + + A L M
Sbjct: 710 SSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEE 769
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG P+VV Y + + +V++ +L +M G A + TYR I+ C + +
Sbjct: 770 KGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDD 829
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
A +L ++ + Y +I+G
Sbjct: 830 AHQLLDEMKQTYWPKHMAGYRKVIEG 855
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 180/389 (46%), Gaps = 39/389 (10%)
Query: 26 CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTP 85
CL ++ S+ + + S G PD TY+ +I C +V + F++ + + P
Sbjct: 454 CLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVP 513
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
+ T+T LI C + +A F ++ GC PNV TY LI+ +
Sbjct: 514 DVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKA---------- 563
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
+M+S N ELF M E P+VVTYT++I G C + +A +
Sbjct: 564 RKMSSAN-------------ELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR 610
Query: 206 M--------------MDQG--VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
M +D G PN+ T+ ++D LCK K+ EA LLD+M G PN
Sbjct: 611 MRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN 670
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
VY+ L+DGFC G+++ A+ +F M G V++YS LI+ K+K ++ AL +
Sbjct: 671 HIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLS 730
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
ML P+V+IY + L ++ + + A++L M+ G + TY IDG K
Sbjct: 731 RMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAG 790
Query: 370 YIVEAVELFRTLRILKCELDIRAYNCLID 398
+ + +EL R + C + Y LI+
Sbjct: 791 KVDKCLELMRQMGAKGCAPNFVTYRVLIN 819
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 194/454 (42%), Gaps = 72/454 (15%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L + DT + + ++ +G D YT ++ CK GR +
Sbjct: 230 PSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALAL 289
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY--------- 125
I + F + V +T +I GLC S EA +++R C PNV TY
Sbjct: 290 ---IEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLR 346
Query: 126 --------------------------NTLINGLYRTGHTIVALNLFEEMAS--------- 150
N+LI+ R+G A L ++M
Sbjct: 347 KRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVV 406
Query: 151 ---------GNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
GN + ++ A++ + +M D ++ + V +++ R C A + +A
Sbjct: 407 YNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYS 466
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
++ EMM +G P+ T++ ++ LC K+D A L + M V P+ F Y L+D FC
Sbjct: 467 IIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFC 526
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
G + +A++ F M GC V +Y+ LI+ Y K +++ A L+ MLS+G P+VV
Sbjct: 527 KVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVV 586
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT----------------WTYRTFIDGL 365
Y L + Q+E+A +++ M+ + D +TY +DGL
Sbjct: 587 TYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGL 646
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
CK + EA +L + + CE + Y+ LIDG
Sbjct: 647 CKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDG 680
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 194/434 (44%), Gaps = 38/434 (8%)
Query: 4 FDYMLNMRPSP--PPVCSFNILF-GCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
D++ MR S P V ++ IL GCL K + + + + G +P +N LI+
Sbjct: 319 MDFLSRMRSSSCIPNVVTYRILLCGCLRK-RQLGRCKRILSMMITEGCYPSRRIFNSLIH 377
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG--C 118
+C+ G S+ + +L ++ P V + LI G+C ++ L + +G
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEML 437
Query: 119 EPNVFTYNTLINGLYR----TGHTIVALNLFEEMASGN------------GEFGVEGFVD 162
+ +V ++ L R G A ++ EM S G VD
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
A LF +MK ++ PDV TYT +I FC +A+ EM+ G PNVVT+ ++
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALI 557
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
K KM A+ L ++M+ G PN Y L+DG C +G++ +A +++ M
Sbjct: 558 HAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADI 617
Query: 283 HTV----------------FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
V F+Y L++G CK +++ A L M +G +P+ ++Y+ L
Sbjct: 618 PDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDAL 677
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
++ +++ A +F +M G + +TY + ID L K+ + A+++ + C
Sbjct: 678 IDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSC 737
Query: 387 ELDIRAYNCLIDGL 400
++ Y +IDGL
Sbjct: 738 APNVIIYTEMIDGL 751
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 147/357 (41%), Gaps = 54/357 (15%)
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN 152
LI+ C A +L+ G +P+ TYN L+ A + EM+
Sbjct: 203 LIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSG 262
Query: 153 GEFGVEGF-----------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
F ++G+ + +E ++ E D V YT +I G C A+ + EA
Sbjct: 263 --FNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMD 320
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
L M PNVVT+ +++ + ++ R+L +MI G P+ ++N+L+ +C
Sbjct: 321 FLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYC 380
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI-------------------- 301
+G + A +L M GC Y+ILI G C N+++
Sbjct: 381 RSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAH 440
Query: 302 ---------------------EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
E A S+ EM+SKG PD Y+ + +L +V+ AF
Sbjct: 441 VVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAF 500
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
LF+EM+ + V D +TY ID CK + +A + F + C ++ Y LI
Sbjct: 501 LLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALI 557
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 97/243 (39%), Gaps = 4/243 (1%)
Query: 159 GFVDKAKELFL-QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
G D+ E FL +++DE+ +IR C WN A L + D G +P+ +T
Sbjct: 175 GGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLT 234
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
+N ++ + ++D A + M G + + + C GR A L E
Sbjct: 235 YNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEE 294
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
TV Y+ +I+G C+ E A+ M S P+VV Y L Q+
Sbjct: 295 FK--LDTVI-YTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLG 351
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
R ++ M +G + + I C++ A +L + + C+ YN LI
Sbjct: 352 RCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILI 411
Query: 398 DGL 400
G+
Sbjct: 412 GGI 414
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 80/202 (39%), Gaps = 16/202 (7%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ + P V ++ + K D L L +++ + G P+ TY +LIN C G
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAG 825
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ +L + ++ + + + +I+G E I + L ++ P + Y
Sbjct: 826 LLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYR 883
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNG--------------EFGVEGFVDKAKELFLQMK 172
LI+ + G +AL L + M+S + VDKA EL+ M
Sbjct: 884 ILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMI 943
Query: 173 DENINPDVVTYTSVIRGFCYAN 194
P++ + +++G N
Sbjct: 944 KRGGIPELSIFFYLVKGLIRIN 965
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 190/387 (49%), Gaps = 11/387 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ + G L + LFK + TG+ PD+YTY ILI+CF K G +
Sbjct: 487 PDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNW 546
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++R P VT+T+LI ++ A LF + GC PNV TY LI+G +
Sbjct: 547 LDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCK 606
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI--NPDVVTYTSVIRGFCY 192
+G+ A ++ M G+ + +++ ++K+ N+ P+VVTY +++ G C
Sbjct: 607 SGNIEKACQIYARM---RGDADIPDV-----DMYFKIKN-NVAEKPNVVTYGALVDGLCK 657
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
A+ +A+ LL M G +PN + ++ ++D CK K+DEA + M++ G PN +
Sbjct: 658 AHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYT 717
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
Y++L+D R++ ++ M C + Y+ +I+G K + + A L M
Sbjct: 718 YSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMME 777
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
KG KP+VV Y + + +V++ +LF EM G A + TY I+ C ++
Sbjct: 778 EKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLD 837
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDG 399
EA L ++ + +Y +I+G
Sbjct: 838 EAYALLEEMKQTYWPKHVSSYCKVIEG 864
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 187/439 (42%), Gaps = 67/439 (15%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L K K LF+ + + G FP++ TY LI+ +CK G + +
Sbjct: 557 PTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQI 616
Query: 75 LGRILRSC----------------FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC 118
R+ PN VT+ +L+ GLC ++ +A L + V GC
Sbjct: 617 YARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGC 676
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV--------EGFVDKAKELFLQ 170
EPN Y+ LI+G + A +F +M V F DK +L L+
Sbjct: 677 EPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLK 736
Query: 171 ----MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
M + + P++V YT +I G +EA L++ M ++G +PNVVT+ ++D
Sbjct: 737 VLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFG 796
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM---------- 276
K GK+D+ L M G PN Y L++ C TG ++ A L M
Sbjct: 797 KAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVS 856
Query: 277 -----------------------ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
E G T+ Y +LI+ + K +E AL L+ E++S
Sbjct: 857 SYCKVIEGYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVIS 916
Query: 314 KGIKPDVV--IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
+ +Y +L +++ AF+LF +M RDGV D T+ + GL +
Sbjct: 917 ASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRW 976
Query: 372 VEAVELFRTLRILKCELDI 390
EA++L +L C++DI
Sbjct: 977 EEALQLSDSL----CQMDI 991
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/459 (24%), Positives = 189/459 (41%), Gaps = 77/459 (16%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC----KMGRVSH 70
P +N + L + ++ + R+ ST P++ TY IL+ C C ++GR
Sbjct: 306 PNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILL-CGCLNKKQLGRCKR 364
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
++ I C+ P+ F SL+ C A L K+ C+P YN LI
Sbjct: 365 ILSMM--IAEGCY-PSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIG 421
Query: 131 GLYRTGHTI------VALNLFEEMAS------------------GNGEFG---------- 156
+ G +A + EM S G G+F
Sbjct: 422 SICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMM 481
Query: 157 -------------VEGF------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
V GF V+ A LF +MK + PDV TYT +I F A
Sbjct: 482 GNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIK 541
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
+A L EM+ G +P VVT+ ++ K K+ A+ L +LMI G PN Y L+
Sbjct: 542 QAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALI 601
Query: 258 DGFCLTGRVNRAKELFVSME----------------SMGCTHTVFSYSILINGYCKNKEI 301
DG+C +G + +A +++ M ++ V +Y L++G CK ++
Sbjct: 602 DGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKV 661
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A L M G +P+ ++Y+ L + +++ A ++F +M G + +TY +
Sbjct: 662 KDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSL 721
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
ID L K+ + +++ + C +I Y +IDGL
Sbjct: 722 IDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGL 760
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 154/391 (39%), Gaps = 32/391 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L + DT + + ++ GL D +T CK+G+
Sbjct: 239 PTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREA--- 295
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L I + F PN + + +I GLC S EA ++R C PNV TY L+ G
Sbjct: 296 LSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLN 355
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ + K + M E P + S++ +C ++
Sbjct: 356 KKQ-----------------------LGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSD 392
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM------DEASRLLDLMIQIGVRP 248
D++ A LL +M +P V +N+++ +C G++ + A + + M+ G
Sbjct: 393 DFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVL 452
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
N + C G+ +A ++ M G +YS +I C +E A L+
Sbjct: 453 NKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLF 512
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
EM G+ PDV Y L + +++A DEM RDG TY T I K
Sbjct: 513 KEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKA 572
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ A ELF + C ++ Y LIDG
Sbjct: 573 KKVSVANELFELMIAKGCFPNVITYTALIDG 603
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 140/326 (42%), Gaps = 25/326 (7%)
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS-- 150
LI+ C A +L+ FG +P TYN L+ R A + EM+
Sbjct: 212 LIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELG 271
Query: 151 -GNGEFGVEGF------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
EF + F V K +E ++ E+ P+ + Y +I G C A+ + EA L
Sbjct: 272 LSMDEFTLGFFAQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFL 331
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
M PNV T+ +++ ++ R+L +MI G P+ ++N+L+ +C +
Sbjct: 332 NRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKS 391
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL------YGEMLSKGIK 317
+ A +L ME C Y+ILI C E+ G ++ Y EMLS G
Sbjct: 392 DDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAG-- 449
Query: 318 PDVVIYNTLFVVLFE-----IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
+ N + VV F + E+A+K+ EM +G DT TY I LC S +
Sbjct: 450 ---TVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVE 506
Query: 373 EAVELFRTLRILKCELDIRAYNCLID 398
A LF+ ++ D+ Y LID
Sbjct: 507 NAFFLFKEMKGTGVVPDVYTYTILID 532
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 107/240 (44%), Gaps = 23/240 (9%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ + P V ++ + K D L LF+ + S G P+ TY +LIN C G
Sbjct: 775 MMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATG 834
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ + +L + ++ + + ++ +I+G E + + L ++ G P + Y
Sbjct: 835 HLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKRE--FILSLGLLEEVEKNGSAPTILLYK 892
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
LI+ + G VAL L +E+ S + + +N+ YTS+
Sbjct: 893 VLIDNFVKAGRLEVALELHKEVISASMSMTAK---------------KNL------YTSL 931
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I F YA+ + A L +M+ GV P++ TF ++ L + + +EA +L D + Q+ +
Sbjct: 932 IYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDI 991
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 84/215 (39%), Gaps = 3/215 (1%)
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+IR C WN A L + D G +P +T+N ++ + K+D A + M ++G
Sbjct: 212 LIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELG 271
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
+ + F C G+ A L +E Y+ +I+G C+ E A+
Sbjct: 272 LSMDEFTLGFFAQALCKVGKWREALSL---IEKEDFVPNTILYNKMISGLCEASFFEEAM 328
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
M S P+V Y L Q+ R ++ M +G + + +
Sbjct: 329 DFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAY 388
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
CK+ A +L + + +C+ YN LI +
Sbjct: 389 CKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSI 423
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 9/167 (5%)
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
NV++ + C+NG + A L + G +P YN L+ F +++ A+ + M
Sbjct: 209 LNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMS 268
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
+G + F+ CK + ALSL + + P+ ++YN + L E E
Sbjct: 269 ELGLSMDEFTLGFFAQALCKVGKWREALSL---IEKEDFVPNTILYNKMISGLCEASFFE 325
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
A + M+ + TYR + G C N +L R RIL
Sbjct: 326 EAMDFLNRMRSTSCIPNVQTYRILLCG-CLNKK-----QLGRCKRIL 366
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 7/160 (4%)
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS--YSILINGYCKNKE 300
QIG VY L+D F G +R E F+ E G V ++LI C+N
Sbjct: 164 QIGYDHTPAVYIALLDVF-ERGSYDRVPEEFLR-EIRGDDKEVLGKLLNVLIRKCCRNGL 221
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
AL G + G KP + YN L V +++ A + EM G++ D +T
Sbjct: 222 WNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGF 281
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
F LCK EA+ L + + YN +I GL
Sbjct: 282 FAQALCKVGKWREALSLIEKEDFVPNTI---LYNKMISGL 318
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 193/403 (47%), Gaps = 21/403 (5%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P ++N+L D SL + ++ G+ + T +I++ C+ GRV+
Sbjct: 22 PASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALE 81
Query: 74 VLGRILR-SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPNVFTYNTLING 131
L + P+ V++T+LI GLC R+ A LF K+ GC PN FTYN L++G
Sbjct: 82 HFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDG 141
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVE--------------GFVDKAKELFLQMKDENIN 177
L + A + E + +F + G VD+A F QM +E
Sbjct: 142 LCKQDRLDAARAVITE--ARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYV 199
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P +V++ ++I G C A +A + EM+D+ PN+VT++V++D LCK+ ++DEA +L
Sbjct: 200 PTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQL 259
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
LD M+ G RP+ Y L+ GF GR++ A L M S GC V +Y+++I+ CK
Sbjct: 260 LDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCK 319
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
++ A ++ E+++ P+VV Y+ L +V+ K+ EM + T
Sbjct: 320 VGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVT 376
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Y T I GL EA +FR + D R Y L L
Sbjct: 377 YNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 419
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 174/374 (46%), Gaps = 24/374 (6%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
+ + ++ L LF R N L TYN+LI FC + F +L + N
Sbjct: 1 MVRAGSHNQALQLF-RENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCN 59
Query: 87 AVTFTSLIKGLCAESRIMEAAALF-TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
T + +++GLC R+ +A F L + +P+V +Y TLINGL + G A +LF
Sbjct: 60 DRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLF 119
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
+M + G P+ TY +++ G C + + A+ ++ E
Sbjct: 120 RKMVAAGG----------------------CRPNAFTYNALVDGLCKQDRLDAARAVITE 157
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
+ P+VVT+N +M L + G++DEA M + G P +N ++ G C R
Sbjct: 158 ARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARR 217
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
+ A E+F M + +YS++I+G CK+ +++ A L M+S+G +PD+V Y
Sbjct: 218 LADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTP 277
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L + +++ A L M G D TY ID LCK + +A E+FR L K
Sbjct: 278 LVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANK 337
Query: 386 CELDIRAYNCLIDG 399
C ++ Y+ LI G
Sbjct: 338 CSPNVVTYSALIGG 351
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 152/335 (45%), Gaps = 26/335 (7%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F M+ P ++N L L K D ++ PD+ TYN L+
Sbjct: 116 FDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMA 175
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
++GRV ++ + P V+F ++I GLC R+ +A +F ++ P
Sbjct: 176 ALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHP 235
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
N+ TY+ +I+GL ++ +D+A++L +M E PD+
Sbjct: 236 NLVTYSVVIDGLCKSDQ-----------------------LDEAQQLLDRMVSEGCRPDL 272
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
V YT ++ GF A + A LL M+ QG P+VVT+ V++D+LCK G++D+A +
Sbjct: 273 VAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRE 332
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
++ PN Y+ L+ G+C RV+ ++ M M C V +Y+ +I G
Sbjct: 333 LVANKCSPNVVTYSALIGGYCRASRVDEGGKV---MREMACRPNVVTYNTMIWGLSMVDR 389
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
E A ++ EM G PD Y L L I Q
Sbjct: 390 NEEAYGMFREMSECGFVPDARTYRGLKRALRMIDQ 424
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 189/386 (48%), Gaps = 9/386 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ + G L D LF+ + S + PD++TY ILI+ FCK+G +
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++R PN VT+T+LI ++ A LF + GC PNV TY LI+G +
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI-NPDVVTYTSVIRGFCYA 193
+G A ++ M GN + +++ ++ D NI +P++ TY +++ G C A
Sbjct: 598 SGQIEKACQIYARM-RGNADI-------PDVDMYFKIDDGNIRDPNIFTYGALVDGLCKA 649
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+ EA+ LL M +G +PN + ++ ++D CK GK+DEA + M + G PN + Y
Sbjct: 650 HKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTY 709
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
++L+D R++ A ++ M C V Y+ +I+G CK + + A L M
Sbjct: 710 SSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEE 769
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG P+VV Y + + +V++ +L +M G A + TYR I+ C + +
Sbjct: 770 KGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDD 829
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
A +L ++ + Y +I+G
Sbjct: 830 AHQLLDEMKQTYWPKHMAGYRKVIEG 855
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 180/389 (46%), Gaps = 39/389 (10%)
Query: 26 CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTP 85
CL ++ S+ + + S G PD TY+ +I C +V + F++ + + P
Sbjct: 454 CLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVP 513
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
+ T+T LI C + +A F ++ GC PNV TY LI+ +
Sbjct: 514 DVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKA---------- 563
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
+M+S N ELF M E P+VVTYT++I G C + +A +
Sbjct: 564 RKMSSAN-------------ELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR 610
Query: 206 M--------------MDQG--VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
M +D G PN+ T+ ++D LCK K+ EA LLD+M G PN
Sbjct: 611 MRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN 670
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
VY+ L+DGFC G+++ A+ +F M G V++YS LI+ K+K ++ AL +
Sbjct: 671 HIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLS 730
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
ML P+V+IY + L ++ + + A++L M+ G + TY IDG K
Sbjct: 731 RMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAG 790
Query: 370 YIVEAVELFRTLRILKCELDIRAYNCLID 398
+ + +EL R + C + Y LI+
Sbjct: 791 KVDKCLELMRQMGAKGCAPNFVTYRVLIN 819
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 194/454 (42%), Gaps = 72/454 (15%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L + DT + + ++ +G D YT ++ CK GR
Sbjct: 230 PSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA--- 286
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY--------- 125
L I + F + V +T +I GLC S EA +++R C PNV TY
Sbjct: 287 LALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLR 346
Query: 126 --------------------------NTLINGLYRTGHTIVALNLFEEMAS--------- 150
N+LI+ R+G A L ++M
Sbjct: 347 KRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVV 406
Query: 151 ---------GNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
GN + ++ A++ + +M D ++ + V +++ R C A + +A
Sbjct: 407 YNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYS 466
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
++ EMM +G P+ T++ ++ LC K+D A L + M V P+ F Y L+D FC
Sbjct: 467 IIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFC 526
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
G + +A++ F M GC V +Y+ LI+ Y K +++ A L+ MLS+G P+VV
Sbjct: 527 KVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVV 586
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT----------------WTYRTFIDGL 365
Y L + Q+E+A +++ M+ + D +TY +DGL
Sbjct: 587 TYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGL 646
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
CK + EA +L + + CE + Y+ LIDG
Sbjct: 647 CKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDG 680
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 194/434 (44%), Gaps = 38/434 (8%)
Query: 4 FDYMLNMRPSP--PPVCSFNILF-GCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
D++ MR S P V ++ IL GCL K + + + + G +P +N LI+
Sbjct: 319 MDFLSRMRSSSCIPNVVTYRILLCGCLRK-RQLGRCKRILSMMITEGCYPSRRIFNSLIH 377
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG--C 118
+C+ G S+ + +L ++ P V + LI G+C ++ L + +G
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEML 437
Query: 119 EPNVFTYNTLINGLYR----TGHTIVALNLFEEMASGN------------GEFGVEGFVD 162
+ +V ++ L R G A ++ EM S G VD
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
A LF +MK ++ PDV TYT +I FC +A+ EM+ G PNVVT+ ++
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALI 557
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
K KM A+ L ++M+ G PN Y L+DG C +G++ +A +++ M
Sbjct: 558 HAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADI 617
Query: 283 HTV----------------FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
V F+Y L++G CK +++ A L M +G +P+ ++Y+ L
Sbjct: 618 PDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDAL 677
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
++ +++ A +F +M G + +TY + ID L K+ + A+++ + C
Sbjct: 678 IDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSC 737
Query: 387 ELDIRAYNCLIDGL 400
++ Y +IDGL
Sbjct: 738 APNVIIYTEMIDGL 751
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 147/357 (41%), Gaps = 54/357 (15%)
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN 152
LI+ C A +L+ G +P+ TYN L+ A + EM+
Sbjct: 203 LIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSG 262
Query: 153 GEFGVEGF-----------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
F ++G+ + +E ++ E D V YT +I G C A+ + EA
Sbjct: 263 --FNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMD 320
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
L M PNVVT+ +++ + ++ R+L +MI G P+ ++N+L+ +C
Sbjct: 321 FLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYC 380
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI-------------------- 301
+G + A +L M GC Y+ILI G C N+++
Sbjct: 381 RSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAH 440
Query: 302 ---------------------EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
E A S+ EM+SKG PD Y+ + +L +V+ AF
Sbjct: 441 VVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAF 500
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
LF+EM+ + V D +TY ID CK + +A + F + C ++ Y LI
Sbjct: 501 LLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALI 557
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 97/243 (39%), Gaps = 4/243 (1%)
Query: 159 GFVDKAKELFL-QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
G D+ E FL +++DE+ +IR C WN A L + D G +P+ +T
Sbjct: 175 GGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLT 234
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
+N ++ + ++D A + M G + + + C GR A L E
Sbjct: 235 YNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEE 294
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
TV Y+ +I+G C+ E A+ M S P+VV Y L Q+
Sbjct: 295 FK--LDTVI-YTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLG 351
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
R ++ M +G + + I C++ A +L + + C+ YN LI
Sbjct: 352 RCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILI 411
Query: 398 DGL 400
G+
Sbjct: 412 GGI 414
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 16/207 (7%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ + P V ++ + K D L L +++ + G P+ TY +LIN C G
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAG 825
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ +L + ++ + + + +I+G E I + L ++ P + Y
Sbjct: 826 LLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYR 883
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNG--------------EFGVEGFVDKAKELFLQMK 172
LI+ + G +AL L +EM+S + VDKA EL+ M
Sbjct: 884 ILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMI 943
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEA 199
P++ + +++G N W EA
Sbjct: 944 KRGGIPELSIFFYLVKGLIRINRWEEA 970
>gi|326529783|dbj|BAK04838.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 490
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 179/364 (49%), Gaps = 15/364 (4%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
PD YTYNILI+C + R G GR+L++ TP+ +T++SL++ C R EA L
Sbjct: 97 PDTYTYNILIDCCHRACRPDLGPAFFGRLLKTGITPDVITYSSLLQCFCDMKRTEEALDL 156
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE--------------F 155
RV G P+ +Y+ ++ G + AL+L MA E F
Sbjct: 157 LLH-RVSGDLPDAISYSVILKSFCDDGRSQCALDLLRMMAEKGAEHSPSVVSYNLVIHGF 215
Query: 156 GVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNV 215
EG + KA LF M + PDVVTY SVI C A ++A+ +L M+ VQP+
Sbjct: 216 FKEGEISKACHLFHGMIQQGYVPDVVTYNSVINALCKARAMDKAEVVLRSMVHNSVQPDA 275
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
VT+N ++ G++ E RLL +M GV P+ +++MD C G++ A+E+F S
Sbjct: 276 VTYNSLIHGYLILGQLKETFRLLKVMRSQGVMPSLVTCSSVMDYLCKHGKIKEAEEMFYS 335
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
G + YSI+++GY + + L M G+ PD+ +N L +
Sbjct: 336 RAVNGRKPDIVLYSIMLHGYAIEGSLVKMIDLCEVMARDGVVPDLPCFNILINAYAKYGM 395
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
++ A F++M + GV + +TY T I CK + +A+E F + + LD Y C
Sbjct: 396 MDVAMLFFEDMLKQGVKPNEFTYLTVISAFCKMGRMDDAMEKFSEMIDMGVPLDTEVYMC 455
Query: 396 LIDG 399
+++G
Sbjct: 456 MVEG 459
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 188/383 (49%), Gaps = 17/383 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF-V 73
P ++NIL C + D + F RL TG+ PD+ TY+ L+ CFC M R +
Sbjct: 97 PDTYTYNILIDCCHRACRPDLGPAFFGRLLKTGITPDVITYSSLLQCFCDMKRTEEALDL 156
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE--PNVFTYNTLING 131
+L R+ S P+A++++ ++K C + R A L + G E P+V +YN +I+G
Sbjct: 157 LLHRV--SGDLPDAISYSVILKSFCDDGRSQCALDLLRMMAEKGAEHSPSVVSYNLVIHG 214
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPD 179
++ G A +LF M V + +DKA+ + M ++ PD
Sbjct: 215 FFKEGEISKACHLFHGMIQQGYVPDVVTYNSVINALCKARAMDKAEVVLRSMVHNSVQPD 274
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
VTY S+I G+ E LL M QGV P++VT + +MD LCK+GK+ EA +
Sbjct: 275 AVTYNSLIHGYLILGQLKETFRLLKVMRSQGVMPSLVTCSSVMDYLCKHGKIKEAEEMFY 334
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
G +P+ +Y+ ++ G+ + G + + +L M G + ++ILIN Y K
Sbjct: 335 SRAVNGRKPDIVLYSIMLHGYAIEGSLVKMIDLCEVMARDGVVPDLPCFNILINAYAKYG 394
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++ A+ + +ML +G+KP+ Y T+ ++ +++ A + F EM GV DT Y
Sbjct: 395 MMDVAMLFFEDMLKQGVKPNEFTYLTVISAFCKMGRMDDAMEKFSEMIDMGVPLDTEVYM 454
Query: 360 TFIDGLCKNSYIVEAVELFRTLR 382
++G + ++A E ++
Sbjct: 455 CMVEGYLNHGDSMKAEEFITKMK 477
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 130/285 (45%), Gaps = 14/285 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+N++ K LF + G PD+ TYN +IN CK + VV
Sbjct: 203 PSVVSYNLVIHGFFKEGEISKACHLFHGMIQQGYVPDVVTYNSVINALCKARAMDKAEVV 262
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ + P+AVT+ SLI G ++ E L +R G P++ T +++++ L +
Sbjct: 263 LRSMVHNSVQPDAVTYNSLIHGYLILGQLKETFRLLKVMRSQGVMPSLVTCSSVMDYLCK 322
Query: 135 TGHTIVALNLFEEMASGNGE-------------FGVEGFVDKAKELFLQMKDENINPDVV 181
G A +F A NG + +EG + K +L M + + PD+
Sbjct: 323 HGKIKEAEEMFYSRAV-NGRKPDIVLYSIMLHGYAIEGSLVKMIDLCEVMARDGVVPDLP 381
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+ +I + + A +M+ QGV+PN T+ ++ CK G+MD+A M
Sbjct: 382 CFNILINAYAKYGMMDVAMLFFEDMLKQGVKPNEFTYLTVISAFCKMGRMDDAMEKFSEM 441
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
I +GV + VY +++G+ G +A+E M++M H +
Sbjct: 442 IDMGVPLDTEVYMCMVEGYLNHGDSMKAEEFITKMKNMDIHHKPW 486
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 207/426 (48%), Gaps = 30/426 (7%)
Query: 3 IFDYMLNMRPSPPPV---------------CSFNILFGCLAKNKHYDTVLSLFKRLNSTG 47
I +L+ RP PP+ SF++L LA D L +F + + G
Sbjct: 144 ILASLLSARPPAPPLFPHLVEVYKEFSFSAASFDLLLRALANAGQLDGALQVFDEMRTLG 203
Query: 48 LFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA 107
+ + N ++N + G + V ++ R+ P+ T + K C ++ A
Sbjct: 204 CRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHAL 263
Query: 108 ALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG--------EFGVEG 159
++ G E N+ Y+ ++NG G T A + + + G G V+G
Sbjct: 264 EFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLP-GRGFSPNIVTYTLLVKG 322
Query: 160 F-----VDKAKELFLQM-KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
+ +++A+ + ++ K++ + D + +VI G+C +A LL EM+D +Q
Sbjct: 323 YCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQV 382
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
N+ +N++++ CK G+M EA +L M +GVRP+ + YN+L+DG+C G +N+A E +
Sbjct: 383 NLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETY 442
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
+M G T +Y+ L+ G+C I+ AL L+ ML KGI P+ + +TL F+
Sbjct: 443 NTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKS 502
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
+ E+A L+ E G+A +T T+ T I+GLCK + EA EL ++ +C DI Y
Sbjct: 503 GKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITY 562
Query: 394 NCLIDG 399
L G
Sbjct: 563 RTLFSG 568
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 192/420 (45%), Gaps = 38/420 (9%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N L D L L+ + G+ P+ + + L++ F K G+ +
Sbjct: 456 TYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKET 515
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
L N TF ++I GLC R+ EA L K++ + C P++ TY TL +G + G
Sbjct: 516 LARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDM 575
Query: 139 IVALNLFEEMASGNGEFGVEGFVD------------KAKELFLQMKDENINPDVVTYTSV 186
A + E+ + +E F K ++ +M + ++P+ V Y ++
Sbjct: 576 DRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGAL 635
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G+C D + A L +EM+++G+ PN+ + ++ + GK DEA+ +L ++ +
Sbjct: 636 IAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDM 695
Query: 247 RPN--------------------------AFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
P+ ++N ++ G C GR+ AK L ++ G
Sbjct: 696 IPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKG 755
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
F+YS LI+G + ++ A L MLS G+ P++V YN+L L + ++ RA
Sbjct: 756 FVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAV 815
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LF ++ G++ + TY T ID CK+ YI EA +L + + + Y+ LI+GL
Sbjct: 816 SLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGL 875
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 177/392 (45%), Gaps = 50/392 (12%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 95
L + + G+ +L Y+ ++N +C++G+ + +L + F+PN VT+T L+K
Sbjct: 262 ALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVK 321
Query: 96 GLCAESRIMEAAALFTKLR----------VFGC--------------------------E 119
G C E + EA + ++R VFG +
Sbjct: 322 GYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQ 381
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKE 166
N+F YN +ING + G + A N+ EM +G G + +G ++KA E
Sbjct: 382 VNLFVYNIMINGYCKLGRMVEAHNILHEM-TGVGVRPDTYSYNSLVDGYCKKGLMNKAFE 440
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
+ M +TY ++++GFC ++A L M+ +G+ PN ++ + ++D
Sbjct: 441 TYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFF 500
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
K+GK ++A L + G+ N +NT+++G C R+ A+EL M+ C +
Sbjct: 501 KSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDII 560
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+Y L +GYCK +++ A + E+ + G P + +N+L F Q + + EM
Sbjct: 561 TYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEM 620
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
G++ +T Y I G CK + A L+
Sbjct: 621 SNRGLSPNTVAYGALIAGWCKEGDLHTAYNLY 652
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 173/377 (45%), Gaps = 22/377 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M R PP + ++ LF K D + L + G P + +N LI
Sbjct: 546 LVDKMKQWR-CPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGH 604
Query: 63 CKMGRVSHGFV--VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+ HG V +L + +PN V + +LI G C E + A L+ ++ G P
Sbjct: 605 FIAKQ--HGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVP 662
Query: 121 NVFTYNTLINGLYRTG---------HTIVALNLFEEMASGNGEFG-VEGFVDKAKELFLQ 170
N+F ++L++ YR G +V ++ ++++ E G V F+D
Sbjct: 663 NLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFID-------T 715
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ N + + + VI G C +AK LL ++ D+G + T++ ++ +G
Sbjct: 716 VAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGF 775
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+D A L D M+ +G+ PN YN+L+ G C +G ++RA LF + + G + +Y+
Sbjct: 776 VDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNT 835
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI+ +CK+ I A L M+ +GI P V Y+ L L +E A KL D+M +
Sbjct: 836 LIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENN 895
Query: 351 VAADTWTYRTFIDGLCK 367
V + TY T I G +
Sbjct: 896 VDPNYVTYWTLIQGYVR 912
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 164/354 (46%), Gaps = 15/354 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P + ++ +L K+ + + + + + L D + +IN +C+MGR+
Sbjct: 311 PNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAAR 370
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L ++ S N + +I G C R++EA + ++ G P+ ++YN+L++G
Sbjct: 371 LLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYC 430
Query: 134 RTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDV 180
+ G A + M NG F G +D A L+ M + I P+
Sbjct: 431 KKGLMNKAFETYNTMLR-NGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNE 489
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
++ ++++ GF + +A L E + +G+ N TFN +++ LCK +M EA L+D
Sbjct: 490 ISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDK 549
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M Q P+ Y TL G+C G ++RA + +E++G T+ ++ LI G+ K+
Sbjct: 550 MKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQ 609
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
+ EM ++G+ P+ V Y L + + A+ L+ EM G+ +
Sbjct: 610 HGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPN 663
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 137/314 (43%), Gaps = 49/314 (15%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ L K T +L+ + GL P+L+ + L++CF + G+ +V
Sbjct: 627 PNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLV 686
Query: 75 LGRILRSCFTPN--------------------------AVTFTSLIKGLCAESRIMEAAA 108
L ++ + P+ + + +I GLC RI +A
Sbjct: 687 LQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKN 746
Query: 109 LFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELF 168
L L+ G + FTY++LI+G GFVD A +L
Sbjct: 747 LLADLKDKGFVADNFTYSSLIHGC-----------------------SASGFVDVAFDLR 783
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
M + P++VTY S+I G C + + + A L ++ +G+ PN +T+N ++D+ CK+
Sbjct: 784 DTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKD 843
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G + EA +L MI+ G+ P F Y+ L++G C G + A +L M +Y
Sbjct: 844 GYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTY 903
Query: 289 SILINGYCKNKEIE 302
LI GY + + ++
Sbjct: 904 WTLIQGYVRCESVD 917
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 182/381 (47%), Gaps = 25/381 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + FN+L K+ + L + S +FPDL+TYN LI+ +CK G +
Sbjct: 195 PNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGI 254
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R+ R +P+ VT+ SLI G C E R+ EA LF ++ G PN TY TLI+G R
Sbjct: 255 QDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYCR 312
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
AL L E M VEG ++P VVTY S++R C
Sbjct: 313 VNDLEEALRLREVME-------VEG----------------LHPGVVTYNSILRKLCEEG 349
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+A LL EM ++ V+P+ VT N +++ CK G M A ++ M++ G++P+ F +
Sbjct: 350 KIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFK 409
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ GFC V+ AKE M G + + +YS L++ Y E + L E+ K
Sbjct: 410 ALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRK 469
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+ D+ +Y L L +I ++E A ++F MQ G+ D+ Y + K + A
Sbjct: 470 GLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAA 529
Query: 375 VELFRTLRILKCELDIRAYNC 395
++ + + + ++ Y C
Sbjct: 530 SDMLDEMDKRRLMITLKIYRC 550
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 180/382 (47%), Gaps = 16/382 (4%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
S + S+ ++F A ++ + +F+ + G P L+ +L+N K + +
Sbjct: 125 SNSQILSWLVIF--YANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVW 182
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
V +++R PN F LI C + +A L ++ P++FTYNTLI+
Sbjct: 183 KVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLY 242
Query: 133 YRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDV 180
+ G AL + + M G F EG + +A LF ++ P+
Sbjct: 243 CKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNH 300
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTYT++I G+C ND EA L M +G+ P VVT+N I+ +LC+ GK+ +A+RLL+
Sbjct: 301 VTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNE 360
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M + V P+ NTL++ +C G + A ++ M G F++ LI+G+CK E
Sbjct: 361 MSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHE 420
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
++ A EML G P Y+ L ++ E +L DE+ R G+ D YR
Sbjct: 421 VDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRA 480
Query: 361 FIDGLCKNSYIVEAVELFRTLR 382
I LCK I A +F ++
Sbjct: 481 LIRRLCKIDKIESAERIFTLMQ 502
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 145/302 (48%), Gaps = 26/302 (8%)
Query: 99 AESRI-MEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV 157
A SR+ +A +F +RV G +P++ L+N L + T + ++++M GV
Sbjct: 138 ANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMV----RVGV 193
Query: 158 EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
P++ + +I C + D +A+ LL EM + + P++ T
Sbjct: 194 V-------------------PNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFT 234
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
+N ++ CK G EA + D M + GV P+ YN+L+ GFC GR+ A LF E
Sbjct: 235 YNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLF--RE 292
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
G T +Y+ LI+GYC+ ++E AL L M +G+ P VV YN++ L E +++
Sbjct: 293 INGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIK 352
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
A +L +EM V D T T I+ CK + A+++ + + + D + LI
Sbjct: 353 DANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALI 412
Query: 398 DG 399
G
Sbjct: 413 HG 414
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 198/449 (44%), Gaps = 71/449 (15%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILI-------------------- 59
FN L K++ Y LFK++ G P YNI I
Sbjct: 345 FNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEK 404
Query: 60 ---------------------NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 98
C C G+ F ++ ++ F P+ T++ +I LC
Sbjct: 405 AYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLC 464
Query: 99 AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE 158
S++ +A LF +++ G P+V+TY LI+ + G A N F+EM N V
Sbjct: 465 DASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVV 524
Query: 159 GFVD------------KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
+ A +LF M E P+VVTYT++I G C A ++A C +
Sbjct: 525 TYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKA-CQIYAR 583
Query: 207 MDQGVQ-----------------PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
M ++ PN++T+ ++D LCK +++EA LLD M G PN
Sbjct: 584 MQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPN 643
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
VY+ L+DGFC TG++ A+E+FV M G +++YS LIN K K ++ L +
Sbjct: 644 QIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLS 703
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
+ML P+VVIY + L ++ + E A++L +M+ G + TY IDG K
Sbjct: 704 KMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIG 763
Query: 370 YIVEAVELFRTLRILKCELDIRAYNCLID 398
I + +EL+R + C + Y LI+
Sbjct: 764 KIEQCLELYRDMCSKGCAPNFITYRVLIN 792
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 189/387 (48%), Gaps = 11/387 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ + G L + LF+ + G+ P +YTY ILI+ FCK G +
Sbjct: 451 PDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNW 510
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+LR TPN VT+TSLI ++ +A LF + + G +PNV TY LI+G +
Sbjct: 511 FDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCK 570
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAK-ELFLQMKDENIN-PDVVTYTSVIRGFCY 192
G A ++ M +G ++ + +++ ++ D + P+++TY +++ G C
Sbjct: 571 AGQIDKACQIYARM---------QGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCK 621
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
AN EA LL M G +PN + ++ ++D CK GK++ A + M + G PN +
Sbjct: 622 ANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYT 681
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
Y++L++ R++ ++ M CT V Y+ +I+G CK + E A L +M
Sbjct: 682 YSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKME 741
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
G P+V+ Y + +I ++E+ +L+ +M G A + TYR I+ C +
Sbjct: 742 EVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLD 801
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDG 399
EA L ++ I +Y +I+G
Sbjct: 802 EAHRLLDEMKQTYWPRHISSYRKIIEG 828
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 183/401 (45%), Gaps = 33/401 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +N + L + + + + R+ S P++ TY IL++ G++ +
Sbjct: 270 PDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRI 329
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ PN F SL+ C A LF K+ GC+P YN I +
Sbjct: 330 LSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSI-- 387
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
N E ++ A++ + +M D + + V ++ R C A
Sbjct: 388 ---------------CSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAG 432
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+++A ++ EMM +G P+ T++ ++ LC K+++A L + M + G+ P+ + Y
Sbjct: 433 KFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYT 492
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+D FC G + +A+ F M CT V +Y+ LI+ Y K +++ A L+ ML +
Sbjct: 493 ILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLE 552
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD----------------TWTY 358
G KP+VV Y L + Q+++A +++ MQ D ++D TY
Sbjct: 553 GSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITY 612
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+DGLCK + + EA EL T+ + CE + Y+ LIDG
Sbjct: 613 GALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDG 653
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 191/428 (44%), Gaps = 35/428 (8%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
FD ML +P V +++ L K +D LF+ + G P++ TY LI+ C
Sbjct: 511 FDEMLRDNCTPNVVTYTSLIHAYLKARKVFDAN-KLFEMMLLEGSKPNVVTYTALIDGHC 569
Query: 64 KMGRVSHGFVVLGRIL----------------RSCFTPNAVTFTSLIKGLCAESRIMEAA 107
K G++ + R+ C TPN +T+ +L+ GLC +R+ EA
Sbjct: 570 KAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAH 629
Query: 108 ALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG-------------NGE 154
L + V GCEPN Y+ LI+G +TG A +F +M+ N
Sbjct: 630 ELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSL 689
Query: 155 FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
F E +D ++ +M + + P+VV YT +I G C EA L+++M + G PN
Sbjct: 690 FK-EKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPN 748
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
V+T+ ++D K GK+++ L M G PN Y L++ C TG ++ A L
Sbjct: 749 VITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLD 808
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
M+ + SY +I G+ N+E ++ L E+ P +Y L +
Sbjct: 809 EMKQTYWPRHISSYRKIIEGF--NREFITSIGLLDELSENESVPVESLYRILIDNFIKAG 866
Query: 335 QVERAFKLFDEMQRDG--VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
++E A L +E+ A+ + Y + I+ L S + +A EL+ ++ ++
Sbjct: 867 RLEGALNLLEEISSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELST 926
Query: 393 YNCLIDGL 400
+ LI GL
Sbjct: 927 FVHLIKGL 934
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 165/388 (42%), Gaps = 34/388 (8%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N L + DT + + ++++G D T CK GR +L +
Sbjct: 207 TYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAGRCGDALSLLEK- 265
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
F P+ V + ++ GLC S EA + ++R C PNV TY L++G
Sbjct: 266 --EEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCL----- 318
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
G G+ G + K + M E P+ + S++ +C + D++
Sbjct: 319 ------------GKGQLG------RCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSY 360
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL-------MIQIGVRPNAF 251
A L +M+ G QP + +N+ + +C N ++ S LL+L M+ +GV N
Sbjct: 361 AYKLFKKMIKCGCQPGYLLYNIFIGSICSNEEL-PGSDLLELAEKAYSEMLDLGVVLNKV 419
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
+ C G+ ++A E+ M S G +YS +I C ++E A L+ EM
Sbjct: 420 NVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEM 479
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
GI P V Y L + +++A FDEM RD + TY + I K +
Sbjct: 480 KKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKV 539
Query: 372 VEAVELFRTLRILKCELDIRAYNCLIDG 399
+A +LF + + + ++ Y LIDG
Sbjct: 540 FDANKLFEMMLLEGSKPNVVTYTALIDG 567
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 161/401 (40%), Gaps = 60/401 (14%)
Query: 55 YNILINCFC----KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 110
YN LI C RVSH F++ R + F LI+ C A
Sbjct: 136 YNALIELLCCNAVNNDRVSHKFLMQIRDDDRELLRKLLNF--LIQKCCRNGMWNVALEEL 193
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF---------- 160
+L+ FG + + TYN LI R A + EM+ N F ++G
Sbjct: 194 GRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMS--NSGFRMDGCTLGCFAYSLC 251
Query: 161 -VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 219
+ + ++ E PD V Y ++ G C A+ + EA +L M PNVVT+
Sbjct: 252 KAGRCGDALSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYR 311
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
+++ G++ R+L +M+ G PN ++N+L+ +C + + A +LF M
Sbjct: 312 ILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKC 371
Query: 280 GCTHTVFSYSILINGYCKNKEIEG------------------------------------ 303
GC Y+I I C N+E+ G
Sbjct: 372 GCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGA 431
Query: 304 -----ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
A + EM+SKG PD Y+ + L + +VE+AF LF+EM+++G+ +TY
Sbjct: 432 GKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTY 491
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
ID CK I +A F + C ++ Y LI
Sbjct: 492 TILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHA 532
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 141/310 (45%), Gaps = 22/310 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ L K + +F +++ G P+LYTY+ LIN K R+ V
Sbjct: 642 PNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKV 701
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++L + TPN V +T +I GLC + EA L K+ GC PNV TY +I+G +
Sbjct: 702 LSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGK 761
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G L L+ +M S G +D+A L +MK + +
Sbjct: 762 IGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISS 821
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I GF ++ + LL E+ + P + +++D K G+++ A L+L+
Sbjct: 822 YRKIIEGF--NREFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGA---LNLLE 876
Query: 243 QIGVRP-----NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
+I P N ++Y +L++ +V++A EL+ SM + + ++ LI G +
Sbjct: 877 EISSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTR 936
Query: 298 NKEIEGALSL 307
+ + AL L
Sbjct: 937 VGKWQEALQL 946
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 195/402 (48%), Gaps = 23/402 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSL--FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
P + + N + LA++ SL F+ L + L P+ YT+N+L++ C G ++
Sbjct: 171 PSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADAL 230
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
L + +P+ VT+ +L+K C + + EA L +++ G P TYNTL++
Sbjct: 231 STLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAY 290
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVE----------------GFVDKAKELFLQMKDENI 176
R G A N+ E M + FG E G VD+A +L +M+ +I
Sbjct: 291 ARLGWIKQATNVVEAMTA----FGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSI 346
Query: 177 -NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+PDVVTY +++ ++A LL EM D+GV+ ++VT N+++ LC+ G+++EA
Sbjct: 347 VSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEAL 406
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
L +M + G+ P+ YNTL+D +C V +A L M G F+ + L+
Sbjct: 407 GRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNL 466
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
CK K E A L +G PD V Y T+ F+ ++ E A L+DEM + +
Sbjct: 467 CKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSI 526
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+TY T I GLC + EA++ L D YN +I
Sbjct: 527 YTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIII 568
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 192/434 (44%), Gaps = 48/434 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L + +L R+ G+ P TYN L++ + ++G + V
Sbjct: 243 PDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNV 302
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPNVFTYNTLINGLY 133
+ + F P+ T+ L GLC ++ EA L ++ P+V TYNTL++ +
Sbjct: 303 VEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACF 362
Query: 134 RTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVV 181
+ + ALNL EEM + + EG +++A M +E + PDV+
Sbjct: 363 KYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVI 422
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL--- 238
TY ++I +C A + +A L+ EM+ G++ + T N ++ LCK + +EA LL
Sbjct: 423 TYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSP 482
Query: 239 --------------------------------DLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
D M + + P+ + YNTL+ G C G++
Sbjct: 483 PQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKL 542
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
A + + G +Y+I+I+ YCK ++E A + +ML KPDVV NTL
Sbjct: 543 TEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTL 602
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
L ++E+A KLF+ G D TY T I LCK+ + A+ F +
Sbjct: 603 MNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGL 662
Query: 387 ELDIRAYNCLIDGL 400
+ D YN ++ L
Sbjct: 663 QPDAFTYNVVLSAL 676
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 167/342 (48%), Gaps = 23/342 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ + NI+ L + + L K + GL PD+ TYN LI+ +CK V+ FV++
Sbjct: 386 LVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMD 445
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++RS + T +L+ LC E R EA L G P+ +Y T++ ++
Sbjct: 446 EMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKEN 505
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
AL L++EM+ + P + TY ++I+G C
Sbjct: 506 KPEPALYLWDEMSK-----------------------RKLTPSIYTYNTLIKGLCTIGKL 542
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
EA L E+M +G+ P+ T+N+I+ CK G +++A + + M++ +P+ NTL
Sbjct: 543 TEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTL 602
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
M+G CL G++ +A +LF S G V +Y+ LI CK+ +++ AL + +M ++G+
Sbjct: 603 MNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGL 662
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+PD YN + L E + E A + ++ G ++ ++Y
Sbjct: 663 QPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSY 704
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 147/349 (42%), Gaps = 66/349 (18%)
Query: 70 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL--FTKLRVFGCEPNVFTYNT 127
H F G + S NAV + L A+L F L PN +T+N
Sbjct: 161 HSFRRRGHVRPSLQAANAV-----LSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNL 215
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
L++ G AL+ M +GF ++PDVVTY +++
Sbjct: 216 LVHTHCSKGTLADALSTLSTM---------QGF--------------GLSPDVVTYNTLL 252
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQP----------------------NVV--------- 216
+ C EA+ LL M +G+ P NVV
Sbjct: 253 KAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFE 312
Query: 217 ----TFNVIMDELCKNGKMDEASRLLDLMIQIG-VRPNAFVYNTLMDGFCLTGRVNRAKE 271
T+NV+ LC+ GK+DEA +L D M + V P+ YNTL+D R + A
Sbjct: 313 PDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALN 372
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
L M G ++ +++I++ G C+ ++E AL M +G+ PDV+ YNTL
Sbjct: 373 LLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYC 432
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
+ V +AF L DEM R G+ DT+T T + LCK EA EL R+
Sbjct: 433 KARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRS 481
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 132/296 (44%), Gaps = 23/296 (7%)
Query: 106 AAALFTKLRVFG-CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKA 164
AA L R G P++ N +++ L R+ T +L
Sbjct: 156 AAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASL-------------------- 195
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
++F + ++P+ T+ ++ C +A L M G+ P+VVT+N ++
Sbjct: 196 -DVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKA 254
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
C+ G + EA LL M + G+ P YNTL+ + G + +A + +M + G
Sbjct: 255 HCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPD 314
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGI-KPDVVIYNTLFVVLFEIHQVERAFKLF 343
+++Y++L G C+ +++ A L EM I PDVV YNTL F+ + A L
Sbjct: 315 LWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLL 374
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+EM+ GV + T+ + GLC+ + EA+ + + D+ YN LID
Sbjct: 375 EEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDA 430
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 119/294 (40%), Gaps = 60/294 (20%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
++D M + R P + ++N L L + L GL PD TYNI+I+ +
Sbjct: 513 LWDEM-SKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAY 571
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G + F ++L + F P+ VT +L+ GLC ++ +A LF G + +V
Sbjct: 572 CKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDV 631
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TYNTLI L + +G VD A F M+ + PD T
Sbjct: 632 ITYNTLIQALCK-----------------------DGDVDTALHFFADMEARGLQPDAFT 668
Query: 183 YTSVIRGFCYANDWNEAKCLL---------------------IEMMDQGVQPNVV----- 216
Y V+ A EA+ +L E + G P V
Sbjct: 669 YNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCES 728
Query: 217 ----------TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
++N + ELC G++ EA +LD M+Q G+ ++ Y TLM+G
Sbjct: 729 GGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGL 782
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 94/191 (49%), Gaps = 1/191 (0%)
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
+ PN TFN+++ C G + +A L M G+ P+ YNTL+ C G + A+
Sbjct: 206 LHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEAR 265
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
L M+ G T +Y+ L++ Y + I+ A ++ M + G +PD+ YN L L
Sbjct: 266 TLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGL 325
Query: 331 FEIHQVERAFKLFDEMQRDG-VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
+ +V+ AFKL DEM+ V+ D TY T +D K +A+ L +R +
Sbjct: 326 CQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSS 385
Query: 390 IRAYNCLIDGL 400
+ +N ++ GL
Sbjct: 386 LVTHNIVVKGL 396
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 182/381 (47%), Gaps = 25/381 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + FN+L K+ + L + S +FPDL+TYN LI+ +CK G +
Sbjct: 195 PNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGI 254
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R+ R +P+ VT+ SLI G C E R+ EA LF ++ G PN TY TLI+G R
Sbjct: 255 QDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYCR 312
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
AL L E M VEG ++P VVTY S++R C
Sbjct: 313 VNDLEEALRLREVME-------VEG----------------LHPGVVTYNSILRKLCEEG 349
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+A LL EM ++ V+P+ VT N +++ CK G M A ++ M++ G++P+ F +
Sbjct: 350 KIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFK 409
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ GFC V+ AKE M G + + +YS L++ Y E + L E+ K
Sbjct: 410 ALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRK 469
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+ D+ +Y L L +I ++E A ++F MQ G+ D+ Y + K + A
Sbjct: 470 GLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAA 529
Query: 375 VELFRTLRILKCELDIRAYNC 395
++ + + + ++ Y C
Sbjct: 530 SDMLDEMDKRRLMITLKIYRC 550
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 180/382 (47%), Gaps = 16/382 (4%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
S + S+ ++F A ++ + +F+ + G P L+ +L+N K + +
Sbjct: 125 SNSQILSWLVIF--YANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVW 182
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
V +++R PN F LI C + +A L ++ P++FTYNTLI+
Sbjct: 183 KVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLY 242
Query: 133 YRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDV 180
+ G AL + + M G F EG + +A LF ++ P+
Sbjct: 243 CKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNH 300
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTYT++I G+C ND EA L M +G+ P VVT+N I+ +LC+ GK+ +A+RLL+
Sbjct: 301 VTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNE 360
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M + V P+ NTL++ +C G + A ++ M G F++ LI+G+CK E
Sbjct: 361 MSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHE 420
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
++ A EML G P Y+ L ++ E +L DE+ R G+ D YR
Sbjct: 421 VDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRA 480
Query: 361 FIDGLCKNSYIVEAVELFRTLR 382
I LCK I A +F ++
Sbjct: 481 LIRRLCKIDKIESAERIFTLMQ 502
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 145/302 (48%), Gaps = 26/302 (8%)
Query: 99 AESRI-MEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV 157
A SR+ +A +F +RV G +P++ L+N L + T + ++++M GV
Sbjct: 138 ANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMV----RVGV 193
Query: 158 EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
P++ + +I C + D +A+ LL EM + + P++ T
Sbjct: 194 V-------------------PNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFT 234
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
+N ++ CK G EA + D M + GV P+ YN+L+ GFC GR+ A LF E
Sbjct: 235 YNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLF--RE 292
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
G T +Y+ LI+GYC+ ++E AL L M +G+ P VV YN++ L E +++
Sbjct: 293 INGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIK 352
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
A +L +EM V D T T I+ CK + A+++ + + + D + LI
Sbjct: 353 DANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALI 412
Query: 398 DG 399
G
Sbjct: 413 HG 414
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 192/393 (48%), Gaps = 13/393 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F+++ + L +F + G P L + N L+N K G V +++
Sbjct: 159 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 218
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
R P+ + ++ C + ++ EAA K+ G EPN+ TY++LING G
Sbjct: 219 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 278
Query: 140 VALNLFEEMASGNGEFGV-------EGF-----VDKAKELFLQMKDEN-INPDVVTYTSV 186
A + + M+ V +G+ +D+A+++ M++E + PD Y +
Sbjct: 279 AAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVL 338
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G+C ++A LL EM+ G++ N+ N +++ CK G++ EA ++ M+ +
Sbjct: 339 IDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNL 398
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+P+++ YNTL+DG+C G + A L M G TV +Y+ L+ G C+ + AL
Sbjct: 399 KPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ 458
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
++ M+ G+ PD V Y+TL LF++ E A L+ ++ G T+ T I GLC
Sbjct: 459 IWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLC 518
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
K +VEA E+F ++ L C D Y LIDG
Sbjct: 519 KMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDG 551
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 194/399 (48%), Gaps = 13/399 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S N L L KN T +++++ G+ PD++ +I++N FCK G+V
Sbjct: 189 PSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGF 248
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ ++ PN VT+ SLI G + + A + + G NV TY LI G +
Sbjct: 249 VKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCK 308
Query: 135 TGHTIVALNLF----EEMASGNGE--FGV-------EGFVDKAKELFLQMKDENINPDVV 181
A + EE A E +GV G +D A L +M + ++
Sbjct: 309 QCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLF 368
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
S+I G+C + +EA+ ++ M+D ++P+ ++N ++D C+ G EA L D M
Sbjct: 369 ICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKM 428
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+Q G+ P YNTL+ G C G + A +++ M G YS L++G K +
Sbjct: 429 LQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENF 488
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
EGA +L+ ++L++G + +NT+ L ++ ++ A ++FD+M+ G + D TYRT
Sbjct: 489 EGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTL 548
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
IDG CK S + +A ++ + I YN LI GL
Sbjct: 549 IDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGL 587
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 198/399 (49%), Gaps = 15/399 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +I+ K+ D K++ + G+ P++ TY+ LIN + +G V V
Sbjct: 224 PDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGV 283
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC-EPNVFTYNTLINGLY 133
L + + N VT+T LIKG C + ++ EA + ++ P+ Y LI+G
Sbjct: 284 LKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYC 343
Query: 134 RTGHTIVALNLFEEM-------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
RTG A+ L +EM + NG + G + +A+ + +M D N+ PD
Sbjct: 344 RTGKIDDAVRLLDEMLRLGLKTNLFICNSLING-YCKRGEIHEAEGVITRMVDWNLKPDS 402
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+Y +++ G+C +EA L +M+ +G++P V+T+N ++ LC+ G D+A ++ L
Sbjct: 403 YSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHL 462
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M++ GV P+ Y+TL+DG A L+ + + G T + +++ +I+G CK +
Sbjct: 463 MMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGK 522
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ A ++ +M G PD + Y TL + V +AFK+ M+R+ ++ Y +
Sbjct: 523 MVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNS 582
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I GL K+ +VE +L + I +I Y LIDG
Sbjct: 583 LISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDG 621
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 189/413 (45%), Gaps = 55/413 (13%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+FN + L K +F ++ G PD TY LI+ +CK V F V G +
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
R +P+ + SLI GL R++E L T++ + G PN+ TY LI+G +
Sbjct: 569 EREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCK---- 624
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
EG +DKA + +M + ++ +++ ++++ G +E
Sbjct: 625 -------------------EGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDE 665
Query: 199 AKCLLIEMMDQG--------------------------------VQPNVVTFNVIMDELC 226
A L+ +M+D G + PN + +N+ + LC
Sbjct: 666 ANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLC 725
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
K GK+D+A R ++ G P+ F Y TL+ G+ G V+ A L M G +
Sbjct: 726 KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIV 785
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+Y+ LING CK++ ++ A L+ ++ KG+ P+VV YNTL +I ++ AFKL D+M
Sbjct: 786 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 845
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+G++ TY I+GLCK+ I +++L + + + Y L+ G
Sbjct: 846 IEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQG 898
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 182/378 (48%), Gaps = 13/378 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNS-TGLFPDLYTYNILINCFCKMGRVSHGFVVL 75
V ++ +L K D + + + L PD Y +LI+ +C+ G++ +L
Sbjct: 296 VVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLL 355
Query: 76 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRT 135
+LR N SLI G C I EA + T++ + +P+ ++YNTL++G R
Sbjct: 356 DEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCRE 415
Query: 136 GHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTY 183
GHT A NL ++M E V G D A +++ M + PD V Y
Sbjct: 416 GHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGY 475
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
++++ G ++ A L +++ +G + +TFN ++ LCK GKM EA + D M
Sbjct: 476 STLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKD 535
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
+G P+ Y TL+DG+C V +A ++ +ME + ++ Y+ LI+G K++ +
Sbjct: 536 LGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVE 595
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
L EM +G+ P++V Y L + +++AF + EM +G++A+ T +
Sbjct: 596 XTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVS 655
Query: 364 GLCKNSYIVEAVELFRTL 381
GL + I EA L + +
Sbjct: 656 GLYRLGRIDEANLLMQKM 673
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 162/331 (48%), Gaps = 15/331 (4%)
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
F+P F ++K + A +F + G P++ + N+L+N L + G T A
Sbjct: 154 FSP--TVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAH 211
Query: 143 NLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
++++M F +G VD+A +M++ + P++VTY S+I G+
Sbjct: 212 YVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGY 271
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI-QIGVRPN 249
D AK +L M ++GV NVVT+ +++ CK KMDEA ++L M + + P+
Sbjct: 272 VSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPD 331
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
Y L+DG+C TG+++ A L M +G +F + LINGYCK EI A +
Sbjct: 332 ERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVIT 391
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
M+ +KPD YNTL AF L D+M ++G+ TY T + GLC+
Sbjct: 392 RMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVG 451
Query: 370 YIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+A++++ + D Y+ L+DGL
Sbjct: 452 AFDDALQIWHLMMKXGVAPDEVGYSTLLDGL 482
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 118/237 (49%), Gaps = 23/237 (9%)
Query: 45 STGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 104
T L P+ YNI I CK G+V + F P+ T+ +LI G A +
Sbjct: 707 KTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVD 766
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKA 164
EA L ++ G PN+ TYN LINGL ++ + VD+A
Sbjct: 767 EAFRLRDEMLRRGLVPNIVTYNALINGLCKSEN-----------------------VDRA 803
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
+ LF ++ + + P+VVTY ++I G+C + + A L +M+++G+ P+VVT++ +++
Sbjct: 804 QRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALING 863
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
LCK+G ++ + +LL+ MI+ GV Y TL+ G T N + ++M C
Sbjct: 864 LCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNYNEMSKPEALKQNMNC 920
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 76/137 (55%), Gaps = 1/137 (0%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F + D ML R P + ++N L L K+++ D LF +L+ GLFP++ TYN LI+
Sbjct: 769 FRLRDEMLR-RGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLID 827
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+CK+G + F + +++ +P+ VT+++LI GLC I + L ++ G +
Sbjct: 828 GYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDS 887
Query: 121 NVFTYNTLINGLYRTGH 137
+ Y TL+ G ++T +
Sbjct: 888 KLIEYCTLVQGGFKTSN 904
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 113/248 (45%), Gaps = 20/248 (8%)
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ---GVQPNVV------------ 216
K +N P+V +Y ++ ++E + L +++D + NV+
Sbjct: 94 KQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFA 153
Query: 217 ----TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
F++I+ + G A + D M + G P+ N+L++ G + A +
Sbjct: 154 FSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYV 213
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
+ M +G VF SI++N +CK+ +++ A +M + G++P++V Y++L
Sbjct: 214 YQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVS 273
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL-DIR 391
+ VE A + M GV+ + TY I G CK + EA ++ R ++ + D R
Sbjct: 274 LGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDER 333
Query: 392 AYNCLIDG 399
AY LIDG
Sbjct: 334 AYGVLIDG 341
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 189/386 (48%), Gaps = 9/386 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ + G L + SLF+ + G+ P +YTY ILI+ FCK G +
Sbjct: 458 PDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKW 517
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+L TPN VT+T+LI ++ A LF + + GC+PNV TY LI+G +
Sbjct: 518 FDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCK 577
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENIN-PDVVTYTSVIRGFCYA 193
G A ++ M G+ E +DK + ++ N P+V+TY +++ G C A
Sbjct: 578 AGQIEKACQIYARM-RGDIE---SSDMDK----YFKLDHNNCEGPNVITYGALVDGLCKA 629
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
N EA LL M+ G +PN + ++ ++D CK GK+ +A + M + G PN + Y
Sbjct: 630 NRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTY 689
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
++ +D R++ ++ M CT V Y+ +++G CK + + A L +M
Sbjct: 690 SSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEE 749
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG P+VV Y + + ++E+ +LF +M G A + TYR I+ C N + E
Sbjct: 750 KGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDE 809
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
A +L ++ I ++ +I+G
Sbjct: 810 AYKLLDEMKQTYWPKHILSHRKIIEG 835
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 176/390 (45%), Gaps = 41/390 (10%)
Query: 26 CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTP 85
CL +D + + G PD TY+ +I C +V F + + R+ P
Sbjct: 434 CLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVP 493
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
+ T+T LI C I +A F ++ GC PNV TY LI+ + VA LF
Sbjct: 494 SVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELF 553
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
E M E P+VVTYT++I G C A +A C +
Sbjct: 554 EMMLL-----------------------EGCKPNVVTYTALIDGHCKAGQIEKA-CQIYA 589
Query: 206 MMDQGVQ-----------------PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
M ++ PNV+T+ ++D LCK ++ EA LLD M+ G P
Sbjct: 590 RMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEP 649
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
N VY+ ++DGFC G++ A+E+F M G + +++YS I+ K+ ++ L +
Sbjct: 650 NQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVL 709
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
+ML P+VVIY + L +I + + A+KL +M+ G + TY IDG K+
Sbjct: 710 SKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKS 769
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLID 398
I + +ELFR + C + Y LI+
Sbjct: 770 GKIEQCLELFRDMCSKGCAPNFITYRVLIN 799
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 189/412 (45%), Gaps = 33/412 (8%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
FD + P +N + L + ++ + + R+ S+ P++ TY IL++
Sbjct: 266 FDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCL 325
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ G++ +L ++ PN F SLI C A LF K+ GC+P
Sbjct: 326 RKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYL 385
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
YN I + N E +D ++ + +M D + + V
Sbjct: 386 VYNIFIGSV-----------------CSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNV 428
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
++ R C A +++A ++ EMM +G P+ T++ ++ LC K+++A L + M +
Sbjct: 429 SNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKR 488
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G+ P+ + Y L+D FC G + +A++ F M GCT V +Y+ LI+ Y K K++
Sbjct: 489 NGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPV 548
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD--------- 354
A L+ ML +G KP+VV Y L + Q+E+A +++ M+ D ++D
Sbjct: 549 ADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDH 608
Query: 355 -------TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
TY +DGLCK + + EA EL T+ CE + Y+ +IDG
Sbjct: 609 NNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDG 660
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 185/408 (45%), Gaps = 33/408 (8%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
FD ML+ + P V ++ L K K LF+ + G P++ TY LI+ C
Sbjct: 518 FDEMLH-KGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHC 576
Query: 64 KMGRVSHGFVVLGRIL----------------RSCFTPNAVTFTSLIKGLCAESRIMEAA 107
K G++ + R+ +C PN +T+ +L+ GLC +R+ EA
Sbjct: 577 KAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAH 636
Query: 108 ALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS---GNGEFGVEGFVD-- 162
L + GCEPN Y+ +I+G + G A +F +M+ + F+D
Sbjct: 637 ELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCL 696
Query: 163 -KAKELFLQMK------DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNV 215
K L L +K + + P+VV YT ++ G C +EA L+++M ++G PNV
Sbjct: 697 FKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNV 756
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
VT+ ++D K+GK+++ L M G PN Y L++ C G ++ A +L
Sbjct: 757 VTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDE 816
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
M+ + S+ +I G+ ++E ++ L E+ P +Y L + +
Sbjct: 817 MKQTYWPKHILSHRKIIEGF--SQEFITSIGLLDELSENESVPVDSLYRILIDNYIKAGR 874
Query: 336 VERAFKLFDEMQRDGVAA--DTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+E A L +E+ A + + Y + I+ L S + +A+EL+ ++
Sbjct: 875 LEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASM 922
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 162/345 (46%), Gaps = 49/345 (14%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
P++ TY L++ CK RV +L +L PN + + ++I G C ++ +A +
Sbjct: 614 PNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEV 673
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE----------- 158
FTK+ G PN++TY++ I+ L++ + L + +M + V
Sbjct: 674 FTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCK 733
Query: 159 -GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
G D+A +L L+M+++ NP+VVTYT++I GF + + L +M +G PN +T
Sbjct: 734 IGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFIT 793
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQ------------------------IGVR------ 247
+ V+++ C NG +DEA +LLD M Q IG+
Sbjct: 794 YRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFITSIGLLDELSEN 853
Query: 248 ---PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV---FSYSILINGYCKNKEI 301
P +Y L+D + GR+ A +L + S +H V + Y+ LI ++
Sbjct: 854 ESVPVDSLYRILIDNYIKAGRLEVALDLLEEISS-SPSHAVSNKYLYASLIENLSHASKV 912
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+ AL LY M+SK + P++ I L L ++ + + A +L D +
Sbjct: 913 DKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQLSDSI 957
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 2/210 (0%)
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
G+ + A E ++KD P TY ++I+ F A+ + A + EM+ + T
Sbjct: 190 GWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTL 249
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
+ LCK GK EA L+D P+ YN ++ G C A ++ M S
Sbjct: 250 SCFAYSLCKGGKCREAFDLIDEAEDF--VPDTVFYNRMVSGLCEASLFEEAMDILHRMRS 307
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
C V +Y IL++G + ++ + M+++G P+ I+N+L +
Sbjct: 308 SSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSY 367
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
A+KLF +M + G Y FI +C N
Sbjct: 368 AYKLFKKMIKCGCQPGYLVYNIFIGSVCSN 397
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 74/195 (37%), Gaps = 2/195 (1%)
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
L+E+ D + N ++ + C+NG + A L + G +P+ YN L+ F
Sbjct: 164 LMEIKDDDHELLRRLLNFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLR 223
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
+++ A + M S ++ S CK + A L E ++ PD V
Sbjct: 224 ADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDE--AEDFVPDTVF 281
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
YN + L E E A + M+ + TYR + G + + + +
Sbjct: 282 YNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMI 341
Query: 383 ILKCELDIRAYNCLI 397
C + +N LI
Sbjct: 342 TEGCYPNREIFNSLI 356
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 51/137 (37%), Gaps = 2/137 (1%)
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS--YSILINGYCKNKE 300
QIG V++ L+D + L ME H + + L+ C+N
Sbjct: 132 QIGYSHTPQVFDKLLDLLGCNVNADDRVPLKFLMEIKDDDHELLRRLLNFLVRKCCRNGW 191
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
AL G + G KP YN L V +++ A+ + EM D +T
Sbjct: 192 WNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSC 251
Query: 361 FIDGLCKNSYIVEAVEL 377
F LCK EA +L
Sbjct: 252 FAYSLCKGGKCREAFDL 268
>gi|224127568|ref|XP_002329310.1| predicted protein [Populus trichocarpa]
gi|222870764|gb|EEF07895.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 180/353 (50%), Gaps = 25/353 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + +L LAK++ DTV ++K++ G+ +++ YN+L++ CK G V V
Sbjct: 169 PHLHACTVLLNSLAKDRLTDTVWKIYKKMVKLGVVANIHVYNVLLHACCKSGDVEKAEKV 228
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + C P+ T+ +LI C + EA ++ ++ + G P++FTYN+LI G R
Sbjct: 229 LSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCR 288
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
EG + +A +LF +KD + P+ VTYTS+I G+C N
Sbjct: 289 -----------------------EGRMREAVQLFRDIKD--VTPNHVTYTSLIDGYCRVN 323
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
D +EA L M ++G+ P V+T+N I+ +LC+ G++ +A+ LL+ M + + P+ N
Sbjct: 324 DLDEALRLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLNEMSERKIEPDNVTCN 383
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL++ +C G + A ++ M G F+Y LI+G+CK KEI+ A L M+
Sbjct: 384 TLINAYCKIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGFCKAKEIDKAKELLFGMMDA 443
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
G P Y+ L + E KL DE+ R G+ D YR I CK
Sbjct: 444 GFSPSYCTYSWLVDSYCKQQNEEAVIKLPDELVRRGLCVDVSVYRALIRRFCK 496
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 159/345 (46%), Gaps = 23/345 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N L K + LS+ R+ G+ PD++TYN LI FC+ GR+ V
Sbjct: 239 PDLFTYNTLISLYCKKGMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGRMREA-VQ 297
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R ++ TPN VT+TSLI G C + + EA L + G P V TYN+++ L
Sbjct: 298 LFRDIKD-VTPNHVTYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITYNSILRKLCE 356
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
G A L EM+ E + G + A ++ +M + D T
Sbjct: 357 GGRLRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAGLKLDQFT 416
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I GFC A + ++AK LL MMD G P+ T++ ++D CK + +L D ++
Sbjct: 417 YKALIHGFCKAKEIDKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNEEAVIKLPDELV 476
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ + VY L+ FC +++ A+ + M+ G Y+ L GY K ++
Sbjct: 477 RRGLCVDVSVYRALIRRFCKIEKIDCAQRVLGLMKDKGIFGDSVVYTSLAYGYWKVGKVN 536
Query: 303 GALSLYGEMLSKGIKPDVVIYNTL---------FVVLFEIHQVER 338
+ EM K + + IY + + LF H +ER
Sbjct: 537 VTSDILDEMYKKRLMITLKIYRSFNASYASDNSILSLFWNHVLER 581
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 137/290 (47%), Gaps = 22/290 (7%)
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------- 157
EA +F +RV G P++ L+N L + T ++++M + GV
Sbjct: 154 EAIQVFEHMRVNGFRPHLHACTVLLNSLAKDRLTDTVWKIYKKMV----KLGVVANIHVY 209
Query: 158 ---------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD 208
G V+KA+++ +M+ + + PD+ TY ++I +C EA + M
Sbjct: 210 NVLLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEM 269
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
G+ P++ T+N ++ C+ G+M EA +L + V PN Y +L+DG+C ++
Sbjct: 270 AGISPDIFTYNSLIYGFCREGRMREAVQLFRDIKD--VTPNHVTYTSLIDGYCRVNDLDE 327
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
A L M G TV +Y+ ++ C+ + A L EM + I+PD V NTL
Sbjct: 328 ALRLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLIN 387
Query: 329 VLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
+I + A K+ D+M G+ D +TY+ I G CK I +A EL
Sbjct: 388 AYCKIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGFCKAKEIDKAKELL 437
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 4/205 (1%)
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 232
D ++N V+++ ++ G +EA + M G +P++ V+++ L K+ D
Sbjct: 131 DPDVNSHVLSWLVIVYGNSKMT--HEAIQVFEHMRVNGFRPHLHACTVLLNSLAKDRLTD 188
Query: 233 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
++ M+++GV N VYN L+ C +G V +A+++ ME +F+Y+ LI
Sbjct: 189 TVWKIYKKMVKLGVVANIHVYNVLLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLI 248
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
+ YCK ALS+ M GI PD+ YN+L ++ A +LF +++ V
Sbjct: 249 SLYCKKGMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGRMREAVQLFRDIK--DVT 306
Query: 353 ADTWTYRTFIDGLCKNSYIVEAVEL 377
+ TY + IDG C+ + + EA+ L
Sbjct: 307 PNHVTYTSLIDGYCRVNDLDEALRL 331
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 94/193 (48%), Gaps = 6/193 (3%)
Query: 208 DQGVQPNVVTFNVIMDELCKNGKM-DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
D V +V+++ VI + N KM EA ++ + M G RP+ L++
Sbjct: 131 DPDVNSHVLSWLVI---VYGNSKMTHEAIQVFEHMRVNGFRPHLHACTVLLNSLAKDRLT 187
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ +++ M +G + Y++L++ CK+ ++E A + EM K + PD+ YNTL
Sbjct: 188 DTVWKIYKKMVKLGVVANIHVYNVLLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTL 247
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
+ + A + D M+ G++ D +TY + I G C+ + EAV+LFR ++
Sbjct: 248 ISLYCKKGMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGRMREAVQLFRDIK--DV 305
Query: 387 ELDIRAYNCLIDG 399
+ Y LIDG
Sbjct: 306 TPNHVTYTSLIDG 318
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 192/411 (46%), Gaps = 55/411 (13%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+N L LA+ D + L+ + + D+YT+N++IN +CKMG V + +++
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMI 219
Query: 80 RSCFTP-------------------------------NAVTFTSLIKGLCAESRIMEAAA 108
++ +P N V++ LI GLC RI EA +
Sbjct: 220 QAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNEVSYNQLIHGLCEAGRIDEAVS 279
Query: 109 LFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELF 168
LF +++ C PNV+TY LI GL R V KA L
Sbjct: 280 LFVRMKDDCCYPNVYTYTALIKGLCRKN------------------------VHKAMGLL 315
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+M + N+ PD++TY S+I G C A + A LL M ++G+ P+ T+ +D LCK+
Sbjct: 316 DEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKS 375
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
+++EA RL D + + GV N +Y+ L+DG+C G+V+ A LF M S C+ +++
Sbjct: 376 NRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTF 435
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ LI+G C ++ ALSL+ +M+ G+KP V +N L + + + A K +M
Sbjct: 436 NALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMS 495
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G TY FI+ C + EA ++ ++ D Y LI
Sbjct: 496 SGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKA 546
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 182/405 (44%), Gaps = 42/405 (10%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S+N L L + D +SLF R+ +P++YTY LI C+ V +L +
Sbjct: 260 SYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEM 318
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
L P+ +T+ SLI G C + A L + ++ G P+ TY I+ L ++
Sbjct: 319 LERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRV 378
Query: 139 IVALNLF----EEMASGN--------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
A LF EE S N + G VD+A LF +M +N +P+ T+ ++
Sbjct: 379 EEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNAL 438
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G C A + EA L +M+ G++P V TFN+++ + K G D+A + L M+ G
Sbjct: 439 IHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGE 498
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+P A YN ++ +C G+V A+++ V M+ G F+Y+ LI Y K A
Sbjct: 499 KPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFD 558
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEI-HQVERA-------------------------- 339
+ M +P + +L LF+ + VE++
Sbjct: 559 VLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFD 618
Query: 340 --FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
+LF+EM++ G D+ Y I G+CK + A++L ++
Sbjct: 619 IVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQ 663
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 147/355 (41%), Gaps = 42/355 (11%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
C+F+ ML+ SP +FN L L + LSLF ++ GL P +YT+NILI
Sbjct: 418 CLFEKMLSKNCSPNAY-TFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGR 476
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
K G L +++ S P A T+ + I+ C+ ++ EA + +++ G P+
Sbjct: 477 MLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPD 536
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEM-------------------------ASGNGEFG 156
FTY +LI + G T A ++ + M +GE G
Sbjct: 537 DFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETG 596
Query: 157 VEGFV----------------DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
VE D ELF +M+ PD Y +I G C + A
Sbjct: 597 VESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIAL 656
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
LL +M +G+ P+ + FN ++ CK K EA+ +++ MI G P TL+ G
Sbjct: 657 KLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGL 716
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
G R +F + G ++ ILI+G K +E L+ EM G
Sbjct: 717 YEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNG 771
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 2/120 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P FN + C K + Y ++ + + +G P L LI + G G V
Sbjct: 669 PSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSV 728
Query: 75 LGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ LR C + + + + LI G+ + + E + LF ++ GC + TY+ L L+
Sbjct: 729 FKK-LRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKLH 787
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/359 (31%), Positives = 171/359 (47%), Gaps = 23/359 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ L + K + LF ++ GL P+ TYN LI+ +C G + F
Sbjct: 241 PDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSY 300
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ P+ T+ L+ L E R+ EA + ++R G P+ TYN LING R
Sbjct: 301 RDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSR 360
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G+ A +L EM S + I P VTYTS+I N
Sbjct: 361 CGNAKRAFDLHNEMLS-----------------------KGIEPTHVTYTSLIYVLSRRN 397
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EA L +++DQGV P+V+ FN ++D C NG ++ A LL M + V P+ +N
Sbjct: 398 RMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFN 457
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TLM G C G+V A+ L M+ G SY+ LI+GY + +I+ A + EMLS
Sbjct: 458 TLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSI 517
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
G P ++ YN L L + + + A +L EM G++ D TY + I+G+ +VE
Sbjct: 518 GFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 576
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 185/393 (47%), Gaps = 18/393 (4%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F++L G L K + + + G P++ +YN +I+ + G + +L +
Sbjct: 182 FDLLEGKLKKAREF------IGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMR 235
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
P++ T+ SLI G+C E R+ EA+ LF K+ G PN TYNTLI+G G
Sbjct: 236 VKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLE 295
Query: 140 VALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
A + +EM +EG + +A ++ +M+ + I PD +TY +I
Sbjct: 296 RAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILI 355
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
G+ + A L EM+ +G++P VT+ ++ L + +M EA L + ++ GV
Sbjct: 356 NGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVS 415
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P+ ++N ++DG C G V RA L M+ +++ L+ G C+ ++E A L
Sbjct: 416 PDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARML 475
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
EM +GIKPD + YNTL ++ AF + DEM G TY I LCK
Sbjct: 476 LDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCK 535
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
N A EL + + D Y LI+G+
Sbjct: 536 NQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 568
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 56/125 (44%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
++ + PP +FN L + + L + G+ PD +YN LI+ + + G
Sbjct: 444 MDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGD 503
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ F V +L F P +T+ +LIK LC A L ++ G P+ TY +
Sbjct: 504 IKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLS 563
Query: 128 LINGL 132
LI G+
Sbjct: 564 LIEGM 568
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 189/369 (51%), Gaps = 17/369 (4%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP V +FN+L L K +F + TGL P ++N LIN +CK G + GF
Sbjct: 229 PPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFR 288
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ + P+ T+++LI GLC E ++ +A LF ++ G PN T+ TLING
Sbjct: 289 LKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQC 348
Query: 134 RTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVV 181
+ G +AL ++++M + + + G+ +A++ +M + PD
Sbjct: 349 KNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKF 408
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT+++ G C D A + EM+ +G+Q + V F I+ LC++GK+ +A R L M
Sbjct: 409 TYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREM 468
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++ G++P+ Y +MDGFC G V +L M+S G V +Y++L+NG CK ++
Sbjct: 469 LRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQV 528
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD-GVAADTWTYRT 360
+ A L ML+ G+ PD + YN +L + H F ++ + G+ +D +YR+
Sbjct: 529 KNADMLLNAMLNLGVVPDDITYN----ILLQGHCKHGKLGDFQNVKTEMGLVSDYASYRS 584
Query: 361 FIDGLCKNS 369
+ L K S
Sbjct: 585 LLHELSKAS 593
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 174/364 (47%), Gaps = 23/364 (6%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 95
L + + +G P++YT+N+L+N CK G+V ++ I ++ P AV+F +LI
Sbjct: 216 ALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLIN 275
Query: 96 GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEF 155
G C + E L + F P+VFTY+ LI+GL +
Sbjct: 276 GYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCK--------------------- 314
Query: 156 GVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNV 215
E ++ A LF +M D + P+ VT+T++I G C + A + +M +G++ ++
Sbjct: 315 --ECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADL 372
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
V +N ++D LCK G EA + + M + G+ P+ F Y TL+DG C G + A E+
Sbjct: 373 VLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKE 432
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
M G +++ +I+G C++ +I A EML G+KPD Y + +
Sbjct: 433 MVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGD 492
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
V+ FKL EMQ DG TY ++GLCK + A L + L D YN
Sbjct: 493 VKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNI 552
Query: 396 LIDG 399
L+ G
Sbjct: 553 LLQG 556
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 172/346 (49%), Gaps = 29/346 (8%)
Query: 61 CFC---KMGRVSHGFVVLG---RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLR 114
C C +M ++S V L IL S + PN TF L+ LC E ++ +A +F ++R
Sbjct: 200 CKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIR 259
Query: 115 VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDE 174
G +P ++NTLING + SGN E EGF L + M++
Sbjct: 260 KTGLQPTAVSFNTLINGYCK---------------SGNLE---EGF-----RLKMVMEEF 296
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
+ PDV TY+++I G C +A L EM D+G+ PN VTF +++ CKNG++D A
Sbjct: 297 RVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLA 356
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+ M G++ + +YNTL+DG C G A++ M G F+Y+ L++G
Sbjct: 357 LEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDG 416
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
CK ++E AL + EM+ +GI+ D V + + L ++ A + EM R G+ D
Sbjct: 417 SCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPD 476
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY +DG CK + +L + ++ + YN L++GL
Sbjct: 477 DGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGL 522
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 163/357 (45%), Gaps = 23/357 (6%)
Query: 43 LNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 102
L + G + ++ L++ + + G VS + L++ + S
Sbjct: 153 LETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSS 212
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVD 162
M A + ++ G PNV+T+N L+N L + EG V
Sbjct: 213 PMVALEFYLEILDSGYPPNVYTFNVLMNRLCK-----------------------EGKVK 249
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
A+ +F +++ + P V++ ++I G+C + + E L + M + V P+V T++ ++
Sbjct: 250 DAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALI 309
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
D LCK ++++A+ L M G+ PN + TL++G C GRV+ A E++ M + G
Sbjct: 310 DGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLK 369
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
+ Y+ LI+G CK A GEM +G+ PD Y TL + +E A ++
Sbjct: 370 ADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEM 429
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
EM ++G+ D + I GLC++ IV+A R + + D Y ++DG
Sbjct: 430 RKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDG 486
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 79/176 (44%)
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
+ + GK +S ++ G ++FV++ LM + G V+ A + F +
Sbjct: 137 VSRKGKGSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIP 196
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
L+ K AL Y E+L G P+V +N L L + +V+ A +FD
Sbjct: 197 FNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFD 256
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
E+++ G+ ++ T I+G CK+ + E L + + D+ Y+ LIDGL
Sbjct: 257 EIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGL 312
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/402 (30%), Positives = 191/402 (47%), Gaps = 15/402 (3%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P P ++N L L + LS+ + G PD+ TYNIL+ CK GR
Sbjct: 162 PVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCK-GRGYRQ 220
Query: 72 FVVLGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ L ++R+ TPN VT+ L+ G+C E + +A L L GC+P+ YNT++
Sbjct: 221 AMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLK 280
Query: 131 GL-----YRTGHTIVALNLFEEMASGNGEFGV-------EGFVDKAKELFLQMKDENINP 178
GL + +V L E F V +G + +A +L +M
Sbjct: 281 GLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTA 340
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
++VTY ++I G C + + A LL +M G +P++VT+N ++ LC + +A L+
Sbjct: 341 NIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELM 400
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
D M Q G P+ +NTL+ C G + A E+F M GCT +YS +I+G K
Sbjct: 401 DNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKA 460
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+++ AL L+ EM KG PD IY L L + +E A + ++Q G++ T Y
Sbjct: 461 TKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLY 519
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ GLC+N A+++ + C D Y LI+GL
Sbjct: 520 NAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGL 561
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 182/394 (46%), Gaps = 29/394 (7%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++ P PP N L L + D + + + G + Y L + +C+ G
Sbjct: 93 LVESSPRPPDAALANRLVRDLCRRGRPDDA---ERVVGACGPAATVVAYGALTDGYCRAG 149
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
R+ V+G + PNA T+ LI LC ++ +A ++ + GC P+V TYN
Sbjct: 150 RLGDARRVVGGMP---VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYN 206
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
L+ E G G +A EL M+ E P+ VTY +
Sbjct: 207 ILL----------------EATCKGRG-------YRQAMELIDLMRAEGCTPNNVTYNVL 243
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
+ G C D ++A LL + G +P+ V +N ++ LC + +A L+ M++
Sbjct: 244 MDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENC 303
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
PN +N ++ C G + +A +L M GCT + +Y+ +ING C+ + ++GA+
Sbjct: 304 PPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMG 363
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L +M S G KPD+V YNTL L Q A +L D M ++G D T+ T I LC
Sbjct: 364 LLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLC 423
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +V+A+E+F+ + C + Y+ +I GL
Sbjct: 424 QKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGL 457
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 178/390 (45%), Gaps = 14/390 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ D ML R P V ++NIL K + Y + L + + G P+ TYN+L++
Sbjct: 187 LSVLDDML-CRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMD 245
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C G V +L + P+ V + +++KGLC+ R +A L T++ C P
Sbjct: 246 GMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPP 305
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELF 168
N T+N +I L R G A+ L E+M+ + + VD A L
Sbjct: 306 NEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLL 365
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+MK PD+VTY ++++G C A W +A+ L+ M G P+ VTFN ++ LC+
Sbjct: 366 SKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQK 425
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G M +A + M G PN+ Y+T++ G ++++A ELF M G Y
Sbjct: 426 GLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-Y 484
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+L + IE A+ ++ GI P V+YN + + L + E A + M
Sbjct: 485 QLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVS 544
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
G D TY I+GL Y+ EA EL
Sbjct: 545 SGCMPDDLTYVILIEGLAYEGYLNEARELL 574
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 151/320 (47%), Gaps = 17/320 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N + L + + L + P+ T+N++I C+ G + +
Sbjct: 270 PSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQL 329
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ + T N VT+ ++I GLC + + A L +K++ +GC+P++ TYNTL+ GL
Sbjct: 330 LEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCS 389
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+ A L + M G +G + A E+F QM D+ P+ +T
Sbjct: 390 AAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSIT 449
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+++I G A ++A L EM +G P+ + + ++ + L + ++EA + + +
Sbjct: 450 YSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQ 508
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ P+ +YN ++ G C G+ A ++ M S GC +Y ILI G E
Sbjct: 509 DSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLA----YE 564
Query: 303 GALSLYGEMLSKGIKPDVVI 322
G L+ E+L K DV++
Sbjct: 565 GYLNEARELLIKLCSRDVLV 584
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 187/395 (47%), Gaps = 12/395 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ ++N+L L K + + + L GL D+ TY L+ FC++ + G ++
Sbjct: 260 IVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMD 319
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ F+P + L+ GL + +I +A L K+ FG PN+F YN LIN L + G
Sbjct: 320 EMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGG 379
Query: 137 HTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
A L+ M+ N F G +D A F +M + I V Y
Sbjct: 380 DLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYN 439
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
S+I G C D + A+ L IEM ++GV+P TF ++ CK+ ++ +A +L + MI
Sbjct: 440 SLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDN 499
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G+ PN + + L+ G C T ++ A ELF + T +Y++LI GYC++ +I+ A
Sbjct: 500 GITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKA 559
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L +M KG+ PD Y L L +V +A D++ + V + Y + G
Sbjct: 560 FELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHG 619
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
C+ ++EA+ + +D+ + LIDG
Sbjct: 620 YCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDG 654
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 192/398 (48%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + + L L K + + TV LF + G+ PD YT + ++ C++
Sbjct: 188 PEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEK 247
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + + F + VT+ LI GLC R+ EA + L G +V TY TL+ G R
Sbjct: 248 IRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCR 307
Query: 135 TGHTIVALNLFEEMAS---GNGEFGVEGFVD---------KAKELFLQMKDENINPDVVT 182
+ L +EM E V G VD A EL +++ P++
Sbjct: 308 LQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFV 367
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I C D ++A+ L M ++PN +T+++++D C++G++D A D MI
Sbjct: 368 YNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMI 427
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q G+ + YN+L++G C G ++ A+ LF+ M + G T +++ LI+GYCK+ +++
Sbjct: 428 QDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQ 487
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A LY +M+ GI P+V + L L +++ A +LFDE+ + TY I
Sbjct: 488 KAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLI 547
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+G C++ I +A EL + D Y LI GL
Sbjct: 548 EGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGL 585
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 189/394 (47%), Gaps = 26/394 (6%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++N+RP+ +++IL ++ D +S F R+ G+ +Y YN LIN CK G
Sbjct: 393 LMNLRPNG---ITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFG 449
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+S + + P A TFTSLI G C + ++ +A L+ K+ G PNV+T+
Sbjct: 450 DLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFT 509
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
LI+GL T +MA +A ELF ++ + I P VTY +
Sbjct: 510 ALISGLCSTN----------KMA-------------EASELFDELVERKIKPTEVTYNVL 546
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G+C ++A LL +M +G+ P+ T+ ++ LC G++ +A +D + + V
Sbjct: 547 IEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNV 606
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+ N Y+ L+ G+C GR+ A M G + +++LI+G K + +
Sbjct: 607 KLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFD 666
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L +M +G++PD VIY ++ + ++AF+ +D M + + TY ++GLC
Sbjct: 667 LLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLC 726
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
K + A LF+ ++ + Y C +D L
Sbjct: 727 KAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNL 760
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 186/433 (42%), Gaps = 59/433 (13%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M+ + SP ++ G L K D L ++ G P+L+ YN LIN
Sbjct: 317 LMDEMVELGFSPTEAAVSGLVDG-LRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSL 375
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G + ++ + PN +T++ LI C R+ A + F ++ G V
Sbjct: 376 CKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETV 435
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+ YN+LING + G + A+ LF++M ++ + P T
Sbjct: 436 YAYNSLINGQCKFGD-----------------------LSAAESLFIEMTNKGVEPTATT 472
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+TS+I G+C +A L +M+D G+ PNV TF ++ LC KM EAS L D ++
Sbjct: 473 FTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELV 532
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS--------------- 287
+ ++P YN L++G+C G++++A EL M G ++
Sbjct: 533 ERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVS 592
Query: 288 --------------------YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
YS L++GYC+ + ALS EM+ +GI D+V + L
Sbjct: 593 KAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLI 652
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
+ + F L +M G+ D Y + ID K +A E + + +C
Sbjct: 653 DGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECF 712
Query: 388 LDIRAYNCLIDGL 400
++ Y L++GL
Sbjct: 713 PNVVTYTALMNGL 725
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 177/364 (48%), Gaps = 14/364 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD ++ + P V ++N+L ++ D L + ++ GL PD YTY LI+
Sbjct: 527 LFDELVERKIKPTEV-TYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGL 585
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C GRVS + + + N + +++L+ G C E R+MEA + ++ G ++
Sbjct: 586 CSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDL 645
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEM------------ASGNGEFGVEGFVDKAKELFLQ 170
+ LI+G + +L ++M S + EG KA E +
Sbjct: 646 VCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDL 705
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M E P+VVTYT+++ G C A + + A L M V PN +T+ +D L K G
Sbjct: 706 MVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGN 765
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
M EA L M++ G+ N +N ++ GFC GR + A ++ M G +YS
Sbjct: 766 MKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYST 824
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI YC++ + ++ L+ ML++G++PD+V YN L ++++AF+L D+M R G
Sbjct: 825 LIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRG 884
Query: 351 VAAD 354
+ D
Sbjct: 885 IIPD 888
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 190/430 (44%), Gaps = 48/430 (11%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++N L K SLF + + G+ P T+ LI+ +CK +V F +
Sbjct: 435 VYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYN 494
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+++ + TPN TFT+LI GLC+ +++ EA+ LF +L +P TYN LI G R G
Sbjct: 495 KMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDG 554
Query: 137 HTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
A L E+M G V KAK+ + +N+ + + Y+
Sbjct: 555 KIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYS 614
Query: 185 SVIRGFCYANDWNEA---KC--------------------------------LLIEMMDQ 209
+++ G+C EA C LL +M DQ
Sbjct: 615 ALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQ 674
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
G++P+ V + ++D K G +A DLM+ PN Y LM+G C G ++RA
Sbjct: 675 GLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRA 734
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
LF M++ +Y ++ K ++ A+ L+ ML KG+ + V +N +
Sbjct: 735 GLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAML-KGLLANTVTHNIIIRG 793
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
++ + A K+ EM +G+ D TY T I C++ + +V+L+ T+ E D
Sbjct: 794 FCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPD 853
Query: 390 IRAYNCLIDG 399
+ AYN LI G
Sbjct: 854 LVAYNLLIYG 863
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 204/414 (49%), Gaps = 18/414 (4%)
Query: 2 CIFDYMLN--MRPSPPPVCSFNILF-GCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNIL 58
C+F + L+ R FN+L + ++ +D V+ + K + + L P++ T + L
Sbjct: 138 CVFSHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVV-IVKLMFANNLLPEVRTLSAL 196
Query: 59 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC 118
+N K+ + + + + + P+ T +++++ +C + A + G
Sbjct: 197 LNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGF 256
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG--------VEGFVDKAK-ELFL 169
+ ++ TYN LI+GL + A+ + + G G V GF + E +
Sbjct: 257 DLSIVTYNVLIHGLCKGDRVSEAVEVKRSLG-GKGLAADVVTYCTLVLGFCRLQQFEAGI 315
Query: 170 QMKDENI----NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
Q+ DE + +P + ++ G ++A L++++ G PN+ +N +++ L
Sbjct: 316 QLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSL 375
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
CK G +D+A L M + +RPN Y+ L+D FC +GR++ A F M G TV
Sbjct: 376 CKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETV 435
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
++Y+ LING CK ++ A SL+ EM +KG++P + +L + QV++AFKL+++
Sbjct: 436 YAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNK 495
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
M +G+ + +T+ I GLC + + EA ELF L K + YN LI+G
Sbjct: 496 MIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEG 549
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 89/195 (45%)
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M + P V T + +++ L K K L D + GVRP+ + + ++ C
Sbjct: 181 MFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKD 240
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
RAKE ME+ G ++ +Y++LI+G CK + A+ + + KG+ DVV Y T
Sbjct: 241 FLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCT 300
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L + + Q E +L DEM G + +DGL K I +A EL +
Sbjct: 301 LVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFG 360
Query: 386 CELDIRAYNCLIDGL 400
++ YN LI+ L
Sbjct: 361 FVPNLFVYNALINSL 375
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 53/117 (45%)
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
+ +++L+ Y + I A+ + M + + P+V + L L ++ + ++LF
Sbjct: 154 STLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELF 213
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
DE GV D +T + +C+ + A E R + +L I YN LI GL
Sbjct: 214 DESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGL 270
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/393 (30%), Positives = 179/393 (45%), Gaps = 16/393 (4%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +FN + L H L R+ G P + TY L+ C+ + + +LG
Sbjct: 250 VNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLG 309
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
R+ N V ++I+G AE ++ A L+ + GC P+V TYN L++GL + G
Sbjct: 310 RVPEV----NVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLG 365
Query: 137 HTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
A+ + +EM F G D A+ + QM + + + Y
Sbjct: 366 RCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYN 425
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+I +EA L+ EM QG +P++ T+N I+ LC N +MDEA + +++
Sbjct: 426 GIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEE 485
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
GV N YNTL+ +GR L M GC V SY+ LI CK ++ +
Sbjct: 486 GVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRS 545
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
+ L EM++KGIKP+ YN L L + +V A +L EM G+ D TY T I+G
Sbjct: 546 MMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLING 605
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
LCK + A+ L L DI YN LI
Sbjct: 606 LCKVGWTHAALNLLEKLPNENVHPDIVTYNILI 638
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 192/399 (48%), Gaps = 18/399 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S+N + LA+ + L L++R+ + P +T+ + C++GR +
Sbjct: 143 PSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALAL 202
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + R P+AV + ++I L A+ + EAA L ++ + GC +V T+N ++ GL
Sbjct: 203 LRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCG 262
Query: 135 TGHTIVALNLFEEMASGNGEFGV--EGFV----------DKAKELFLQMKDENINPDVVT 182
GH A L + M V GF+ D+A + ++ + N VV
Sbjct: 263 LGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVN----VVM 318
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMM-DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+VIRG C A L EMM +G P+V T+N++M LCK G+ A R+LD M
Sbjct: 319 LNTVIRG-CLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEM 377
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G PN Y+TL+ FC G + A+ + M + G + Y+ +I K+ ++
Sbjct: 378 EEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKL 437
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A+ L EM S+G KPD+ YNT+ L Q++ A +F + +GV A+ TY T
Sbjct: 438 DEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTL 497
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I L + E + L + + C LD+ +YN LI L
Sbjct: 498 IHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKAL 536
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 178/359 (49%), Gaps = 13/359 (3%)
Query: 22 ILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRS 81
++ GCLA+ K L++ + S G PD++TYNIL++ CK+GR +L +
Sbjct: 322 VIRGCLAEGK-LARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEK 380
Query: 82 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVA 141
PN VT+++L+ C +A A+ ++ G N YN +I L + G A
Sbjct: 381 GCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEA 440
Query: 142 LNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSVIRG 189
+ L +EM S + + + +D+A+ +F + +E + + +TY ++I
Sbjct: 441 MRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHA 500
Query: 190 FCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
++ W E L EM+ G +VV++N ++ LCK G +D + LL+ M+ G++PN
Sbjct: 501 LLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPN 560
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
F YN L++ C G+V A EL M + G T + +Y+ LING CK AL+L
Sbjct: 561 NFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLE 620
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
++ ++ + PD+V YN L ++ ++ A L D+ G+ + T+ + +
Sbjct: 621 KLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQNFVRQ 679
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 97/239 (40%), Gaps = 5/239 (2%)
Query: 163 KAKELFLQMKDE-NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
+A L QM + P +Y +V+ A+ +A L M+ V P TF V
Sbjct: 127 RALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 186
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
LC+ G+ +A LL M + G P+A +Y T++ G V A L M MGC
Sbjct: 187 ARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGC 246
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
V +++ ++ G C + A L M+ G P VV Y L L Q + A+
Sbjct: 247 AADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYA 306
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + V T I G + A EL+ + C D+ YN L+ GL
Sbjct: 307 MLGRVPEVNVV----MLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGL 361
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 194/403 (48%), Gaps = 21/403 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG-LFPDLYTYNILINCFCKMGRVSHGFV 73
P ++N L K K LF+ + G P+L TY++LI+C+CK G V G
Sbjct: 147 PDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLG 206
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L + R + ++SLI C E I LF ++ PNV TY+ L+ GL
Sbjct: 207 LLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLG 266
Query: 134 RTGHTIVALNLFEEM---------------ASGNGEFGVEGFVDKAKELFLQMKDENINP 178
RTG A + ++M A G + G G K +L +Q +E P
Sbjct: 267 RTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEE---P 323
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
+TY V+ G C + ++A ++ M+ +G +P+ VT+N ++ LC GK+ EA L
Sbjct: 324 GTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLW 383
Query: 239 DLMI--QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
L++ + V+P+ F N L+ G C GRV+ A + SM MG + +Y+ LI GY
Sbjct: 384 KLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYL 443
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
+++ AL L+ + G P+ + Y+ + L ++ + A LF +M+ G+
Sbjct: 444 AARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVI 503
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
Y + LC+ + +A LF+ +R + +D+ ++N +IDG
Sbjct: 504 DYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDG 546
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 198/412 (48%), Gaps = 18/412 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ M P + ++++L C K+ L L + + GL D++ Y+ LI+ F
Sbjct: 171 LFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAF 230
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C G + G + +LR +PN VT++ L++GL R EA+ + + G P+V
Sbjct: 231 CGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDV 290
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
Y L +GL + G A+ + + M E G E +D A +
Sbjct: 291 VAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEM 350
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEA----KCLLIEMMDQGVQPNVVTFNVIMDELC 226
M + PD VTY ++++G C A +EA K LL E V+P+V T N ++ LC
Sbjct: 351 MVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFH--VKPDVFTCNNLIQGLC 408
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
K G++ +A+R+ M+++G++ N YN L++G+ ++ A +L+ G +
Sbjct: 409 KEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSM 468
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+YS++ING CK + + A L+ +M GI+P V+ YN L L +E+A LF EM
Sbjct: 469 TYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEM 528
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
+ D ++ IDG K + A EL + ++ D ++ LI+
Sbjct: 529 RNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILIN 580
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 189/405 (46%), Gaps = 31/405 (7%)
Query: 3 IFDYMLNMRP-SPP--PVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILI 59
+F ++ P SPP P CS L L K + YD V+S++ ++ S + P + + L
Sbjct: 27 LFHRTIDNDPTSPPSEPACS--TLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALT 84
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGC 118
F S F VL + + F N ++KG C + +A +LF+++ R + C
Sbjct: 85 ESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDC 144
Query: 119 E-PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENIN 177
P+ TYNTL+NG + A LFE M G +
Sbjct: 145 VVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGG----------------------DCR 182
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P++VTY+ +I +C + + E LL EM +G++ +V ++ ++ C G ++ L
Sbjct: 183 PNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGREL 242
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
D M++ V PN Y+ LM G TGR A E+ M + G V +Y++L +G CK
Sbjct: 243 FDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCK 302
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
N A+ + M+ KG +P + YN + L + +++ AF + + M + G D T
Sbjct: 303 NGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVT 362
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC--LIDGL 400
Y T + GLC I EA++L++ L K + + C LI GL
Sbjct: 363 YNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGL 407
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 180/379 (47%), Gaps = 22/379 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD ML R P V +++ L L + + + K + + G+ PD+ Y +L +
Sbjct: 242 LFDEMLR-RKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGL 300
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK GR VL +++ P +T+ ++ GLC E R+ +A + + G +P+
Sbjct: 301 CKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDA 360
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TYNTL+ GL G A++L++ + S E F ++ PDV T
Sbjct: 361 VTYNTLLKGLCGAGKIHEAMDLWKLLLS-------EKF--------------HVKPDVFT 399
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
++I+G C ++A + M++ G+Q N+VT+N +++ K+ EA +L +
Sbjct: 400 CNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAV 459
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G PN+ Y+ +++G C ++ A+ LF M+ G TV Y+ L+ C+ +E
Sbjct: 460 ESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLE 519
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A SL+ EM + DVV +N + + V+ A +L EM + D T+ I
Sbjct: 520 QARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILI 579
Query: 363 DGLCKNSYIVEAVELFRTL 381
+ K + EA+ L+ +
Sbjct: 580 NRFSKLGMLDEAMGLYEKM 598
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 166/361 (45%), Gaps = 20/361 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M+ + P ++N++ L K D + + + G PD TYN L+
Sbjct: 312 VLDLMVQ-KGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGL 370
Query: 63 CKMGRVSHGFVVLGRILRSCF--TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C G++ + +L F P+ T +LI+GLC E R+ +AA + + + G +
Sbjct: 371 CGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQG 430
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFE-EMASG------------NGEFGVEGFVDKAKEL 167
N+ TYN LI G I AL L++ + SG NG ++ + A+ L
Sbjct: 431 NIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQ-MLSVARGL 489
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
F +MKD I P V+ Y +++ C + +A+ L EM + +VV+FN+I+D K
Sbjct: 490 FCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLK 549
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
G + A LL M + + P+A ++ L++ F G ++ A L+ M S G V
Sbjct: 550 AGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVV 609
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ---VERAFKLFD 344
+ L+ GY E E +SL +M K + D + +T+ L + + VE+ F
Sbjct: 610 FDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSRNLDVEKILPKFS 669
Query: 345 E 345
+
Sbjct: 670 Q 670
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/342 (32%), Positives = 169/342 (49%), Gaps = 25/342 (7%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+N+L K+ + +L + S +FPDL+TYN LI+ +CK G V R+
Sbjct: 203 YNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRME 262
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
R P+ VT+ SLI G C E R+ EA LF ++R PN TY TLI+G R
Sbjct: 263 REGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIR--DATPNHVTYTTLIDGYCRLNDLD 320
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
AL L EEM + + + P VVTY S++R C +A
Sbjct: 321 QALRLREEMEA-----------------------QGLYPTVVTYNSILRKLCEIGRIRDA 357
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
LL EM ++ ++P+ VT N +++ CK G M A ++ + M++ G++ + F Y L+ G
Sbjct: 358 NKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHG 417
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
FC ++ AKEL +SM G + + +YS L++GYC + E L L E + KG+ D
Sbjct: 418 FCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVD 477
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+Y L + QV+ A K+F MQ G D+ Y +
Sbjct: 478 KSLYRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSL 519
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 187/392 (47%), Gaps = 50/392 (12%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F++M+ + P + + +L LAK++ D V ++K++ G+ +++ YN+LI+
Sbjct: 152 VFEHMM-VNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHAC 210
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G V +L ME+ +F P++
Sbjct: 211 CKSGDVEKADNLLSE--------------------------MESKCVF---------PDL 235
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQ 170
FTYNTLI+ + G AL++ + M + F EG + +A LF +
Sbjct: 236 FTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKE 295
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
++D P+ VTYT++I G+C ND ++A L EM QG+ P VVT+N I+ +LC+ G+
Sbjct: 296 IRDA--TPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGR 353
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ +A++LL+ M + + P+ NTL++ +C G + A ++ M G F+Y
Sbjct: 354 IRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKA 413
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI+G+CK +E++GA L ML G P Y+ L E KL DE R G
Sbjct: 414 LIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKG 473
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
+ D YR I CK + A ++F ++
Sbjct: 474 LCVDKSLYRALIRRFCKREQVDYAKKIFSLMQ 505
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 153/328 (46%), Gaps = 27/328 (8%)
Query: 74 VLGRILRSCFTP--NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
VL ++R P N+ F+ L+ EA +F + V G P++ L+N
Sbjct: 115 VLSALVRLHDDPDINSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNS 174
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
L + T + ++++MA GVE ++ Y +I C
Sbjct: 175 LAKDRLTDMVWKVYKKMA----RIGVEA-------------------NIHVYNVLIHACC 211
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
+ D +A LL EM + V P++ T+N ++ CK G EA + D M + G++P+
Sbjct: 212 KSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIV 271
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
YN+L+ GFC GR+ A LF + H +Y+ LI+GYC+ +++ AL L EM
Sbjct: 272 TYNSLIHGFCKEGRMREAMRLFKEIRDATPNHV--TYTTLIDGYCRLNDLDQALRLREEM 329
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
++G+ P VV YN++ L EI ++ A KL +EM + D T T I+ CK +
Sbjct: 330 EAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDM 389
Query: 372 VEAVELFRTLRILKCELDIRAYNCLIDG 399
A+++ + +LD Y LI G
Sbjct: 390 KSALKVKNRMVEAGLKLDQFTYKALIHG 417
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 142/343 (41%), Gaps = 56/343 (16%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N L K + LS+ R+ G+ PD+ TYN LI+ FCK GR+ +
Sbjct: 233 PDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRL 292
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
I + TPN VT+T+LI G C + + +A L ++ G P V TYN+++ L
Sbjct: 293 FKEIRDA--TPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCE 350
Query: 135 TGHTIVALNLFEEMASGNGEFG-------------------------------------- 156
G A L EM+ E
Sbjct: 351 IGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFT 410
Query: 157 ----VEGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI--E 205
+ GF +D AKEL L M D +P TY+ ++ G+C N NE L + E
Sbjct: 411 YKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYC--NQQNEEAVLKLPDE 468
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
+ +G+ + + ++ CK ++D A ++ LM + G ++ +Y +L + G+
Sbjct: 469 FVRKGLCVDKSLYRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGK 528
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
N A +L M T+ Y L Y + I LSL+
Sbjct: 529 ANAASDLLDEMYKRRLMITLKIYRALNASYAGDNSI---LSLF 568
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 132/276 (47%), Gaps = 12/276 (4%)
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
T+I+ L + H A +L E++A +F V A L D +IN V ++ +
Sbjct: 83 TMIHILTKFKHLKTAQSLLEKIAYR--DFLSTQSVLSA--LVRLHDDPDINSHVFSWLVI 138
Query: 187 IRGFCYANDW--NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+ YAN EA + MM G +P++ V+++ L K+ D ++ M +I
Sbjct: 139 V----YANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMARI 194
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
GV N VYN L+ C +G V +A L MES +F+Y+ LI+ YCK A
Sbjct: 195 GVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEA 254
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
LS+ M +GIKPD+V YN+L + ++ A +LF E+ RD TY T IDG
Sbjct: 255 LSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEI-RDATPNHV-TYTTLIDG 312
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
C+ + + +A+ L + + YN ++ L
Sbjct: 313 YCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKL 348
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 197/399 (49%), Gaps = 14/399 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S+N + L K + L + + GL P+ T+NIL++ +CK+G + V
Sbjct: 245 PDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQV 304
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + ++ P+ T+ LI GLC + +I EA L ++ P+V TYNTLING +
Sbjct: 305 IDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFD 364
Query: 135 TGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDVV 181
++ L ++M G G + EG +D A +M++ +PD V
Sbjct: 365 CSSSLKGFELIDKM-EGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCV 423
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
T+ ++I G+C A +EA ++ EM +G++ N VT N I+ LC K+D+A +LL
Sbjct: 424 TFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSA 483
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G + Y TL+ G+ G+ A +L+ M+ ++ +Y+ +I G C + +
Sbjct: 484 SKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKT 543
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ ++ E+L G+ PD YNT+ + QVE+AF+ ++M + D +T
Sbjct: 544 DQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNIL 603
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ GLC + +A++LF T +D YN +I GL
Sbjct: 604 LRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGL 642
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 191/396 (48%), Gaps = 16/396 (4%)
Query: 19 SFNIL-FGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGR 77
+FNIL +GC +NK + + L ++ FPD +YN +++ CK G+++ +L
Sbjct: 214 TFNILIYGCCIENKLSEAI-GLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLD 272
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
+ + PN TF L+ G C + EAA + + P+V+TYN LI GL + G
Sbjct: 273 MKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGK 332
Query: 138 TIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
A L +EM + NG F + K EL +M+ + + P+ VTY
Sbjct: 333 IDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSL-KGFELIDKMEGKGVKPNAVTYN 391
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
V++ + + A L +M + G P+ VTFN +++ CK G++ EA R++D M +
Sbjct: 392 VVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRK 451
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G++ N+ NT++ C +++ A +L S G SY LI GY K+ + A
Sbjct: 452 GLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEA 511
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
+ L+ EM K I P ++ YNT+ L + +++ +E+ G+ D TY T I G
Sbjct: 512 MKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILG 571
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
C+ + +A + + + D+ N L+ GL
Sbjct: 572 YCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGL 607
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 176/374 (47%), Gaps = 12/374 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N+L G L K+ D L + + L PD+ TYN LIN GF +
Sbjct: 315 PDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFEL 374
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ ++ PNAVT+ ++K E ++ A K+ G P+ T+NTLING +
Sbjct: 375 IDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCK 434
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G A + +EM+ + E +D A +L D V+
Sbjct: 435 AGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVS 494
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G+ EA L EM ++ + P+++T+N ++ LC +GK D++ L+ ++
Sbjct: 495 YGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELL 554
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ P+ YNT++ G+C G+V +A + M +F+ +IL+ G C ++
Sbjct: 555 ESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLD 614
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL L+ +SKG D V YNT+ L + + E AF L EM+ + D +TY +
Sbjct: 615 KALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAIL 674
Query: 363 DGLCKNSYIVEAVE 376
L + EA E
Sbjct: 675 SALADAGRMKEAEE 688
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 167/340 (49%), Gaps = 23/340 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N++ K D + +++ +G PD T+N LIN +CK GR+S F +
Sbjct: 385 PNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRM 444
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + R N+VT +++ LC E ++ +A L + G + +Y TLI G ++
Sbjct: 445 MDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFK 504
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G ++ A+ L++EM K++ I P ++TY ++I G C++
Sbjct: 505 DGKSVEAMKLWDEM-----------------------KEKEIIPSIITYNTMIGGLCHSG 541
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+++ L E+++ G+ P+ T+N I+ C+ G++++A + + M++ +P+ F N
Sbjct: 542 KTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCN 601
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ G C G +++A +LF + S G +Y+ +I+G CK E A L EM K
Sbjct: 602 ILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEK 661
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
+ PD YN + L + +++ A + + G D
Sbjct: 662 KLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQD 701
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 185/384 (48%), Gaps = 27/384 (7%)
Query: 38 SLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV---VLGRILRSCFTPNAVTFTSLI 94
+F R+ L P+L T N LIN + ++ + +++ N TF LI
Sbjct: 160 QIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILI 219
Query: 95 KGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG- 153
G C E+++ EA L K++ F C P+ +YNT+++ L + G A +L +M + NG
Sbjct: 220 YGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKN-NGL 278
Query: 154 -----EFGV-------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
F + G++ +A ++ M N+ PDV TY +I G C +EA
Sbjct: 279 LPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFR 338
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS-----RLLDLMIQIGVRPNAFVYNTL 256
L EM + + P+VVT+N ++ NG D +S L+D M GV+PNA YN +
Sbjct: 339 LKDEMENLKLLPDVVTYNTLI-----NGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVV 393
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ + G+++ A ME G + +++ LINGYCK + A + EM KG+
Sbjct: 394 VKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGL 453
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
K + V NT+ L +++ A+KL + G D +Y T I G K+ VEA++
Sbjct: 454 KMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMK 513
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
L+ ++ + I YN +I GL
Sbjct: 514 LWDEMKEKEIIPSIITYNTMIGGL 537
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 203/416 (48%), Gaps = 24/416 (5%)
Query: 3 IFDYM--LNMRPSPPPVCSFNILFGCLAKNKHYDTVL---SLFKRLNSTGLFPDLYTYNI 57
IF+ M L+++P+ + + N L L + +V ++F + G+ + T+NI
Sbjct: 161 IFNRMKRLHLKPN---LLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNI 217
Query: 58 LINCFCKMGRVSHGFVVLGRILR-SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF 116
LI C ++S ++G++ SCF P+ V++ +++ LC + ++ EA L ++
Sbjct: 218 LIYGCCIENKLSEAIGLIGKMKDFSCF-PDNVSYNTILDVLCKKGKLNEARDLLLDMKNN 276
Query: 117 GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKA 164
G PN T+N L++G + G A + + MA N G +G +D+A
Sbjct: 277 GLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEA 336
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD-QGVQPNVVTFNVIMD 223
L +M++ + PDVVTY ++I G C+ + LI+ M+ +GV+PN VT+NV++
Sbjct: 337 FRLKDEMENLKLLPDVVTYNTLING-CFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVK 395
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
K GKMD A L M + G P+ +NTL++G+C GR++ A + M G
Sbjct: 396 WYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKM 455
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
+ + +++ C ++++ A L +G D V Y TL + F+ + A KL+
Sbjct: 456 NSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLW 515
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
DEM+ + TY T I GLC + ++++ L D YN +I G
Sbjct: 516 DEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILG 571
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 145/312 (46%), Gaps = 20/312 (6%)
Query: 88 VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
V + I A +R AA +F +++ +PN+ T NTLIN L R
Sbjct: 140 VILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVR------------- 186
Query: 148 MASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
+ + V +K +F + + + T+ +I G C N +EA L+ +M
Sbjct: 187 -------YPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMK 239
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
D P+ V++N I+D LCK GK++EA LL M G+ PN +N L+ G+C G +
Sbjct: 240 DFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLK 299
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A ++ M V++Y++LI G CK+ +I+ A L EM + + PDVV YNTL
Sbjct: 300 EAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLI 359
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
F+ + F+L D+M+ GV + TY + K + A R +
Sbjct: 360 NGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFS 419
Query: 388 LDIRAYNCLIDG 399
D +N LI+G
Sbjct: 420 PDCVTFNTLING 431
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 181/385 (47%), Gaps = 23/385 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ ++ L ++ ++LF + G P+++TY ++IN CK ++ G +
Sbjct: 72 PTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRI 131
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+ T+ +LI G C E + A + + C PN TYN LI G R
Sbjct: 132 LDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCR 191
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ V +A L +M + + P VVTY S+I G C
Sbjct: 192 KKN-----------------------VHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIG 228
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ A LL M + GV P+ T++V +D LCK G+++EA+ L + + + G++ N +Y
Sbjct: 229 YLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYT 288
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DG+C G+++ A L M + C +Y+ LI+G CK ++++ AL L M+ K
Sbjct: 289 ALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQK 348
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+K V Y L V + + + A ++ D+M G D + Y FI C I EA
Sbjct: 349 GLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEA 408
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
++ + D Y +ID
Sbjct: 409 EDMMSMMFERGVMPDALTYTLVIDA 433
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 168/352 (47%), Gaps = 32/352 (9%)
Query: 58 LINCFCKMGR---------VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 108
++N +CK+G V+ F V + + N V++T+LI GLC R+ E
Sbjct: 1 MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60
Query: 109 LFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELF 168
+F K+R C P V TY +++ L+ +G + A+NLF EM
Sbjct: 61 IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEM-------------------- 100
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
++ P++ TYT +I C E + +L EM+++G+ P+V T+N ++D CK
Sbjct: 101 ---RERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKE 157
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G ++ A +LDLM PN YN L+ GFC V+RA L M T +V +Y
Sbjct: 158 GMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTY 217
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ LI+G CK ++ A L M G+ PD Y+ L + ++E A LF+ ++
Sbjct: 218 NSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKE 277
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G+ A+ Y IDG CK + +A L + C + YN LIDGL
Sbjct: 278 KGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGL 329
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 166/369 (44%), Gaps = 12/369 (3%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P + ++ ++ + K + + + GL P + TYN LI+ +CK G V
Sbjct: 103 RGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEA 162
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+L + + PN T+ LI G C + + A AL +K+ P+V TYN+LI+
Sbjct: 163 AQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIH 222
Query: 131 GLYRTGHTIVA---LNLFEEMASGNGEFGVEGFVD---------KAKELFLQMKDENINP 178
G + G+ A LNL E ++ F+D +A LF +K++ I
Sbjct: 223 GQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKA 282
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
+ V YT++I G+C A ++A LL M+ + PN T+N ++D LCK K+ EA L+
Sbjct: 283 NEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLM 342
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
+ MIQ G++ Y L+ G + A + M S G V+ Y+ I+ +C
Sbjct: 343 ESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTR 402
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
I+ A + M +G+ PD + Y + + + AF + M G TY
Sbjct: 403 GNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTY 462
Query: 359 RTFIDGLCK 367
I L K
Sbjct: 463 SCLIKHLLK 471
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/474 (25%), Positives = 187/474 (39%), Gaps = 77/474 (16%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ ML R +P V ++N L K + D+ L +N G+ PD +TY++ I+
Sbjct: 201 LLSKMLESRLTPS-VVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTL 259
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK GR+ V+ + N V +T+LI G C ++ +A +L ++ C PN
Sbjct: 260 CKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNS 319
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
TYN LI+GL + AL L E M + V EG D A + Q
Sbjct: 320 STYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQ 379
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCL---------------------------- 202
M PDV YT+ I FC + EA+ +
Sbjct: 380 MVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGL 439
Query: 203 -------LIEMMDQGVQPNVVTFNVIMDELCKNG-------------------------- 229
L M D G P+ T++ ++ L K
Sbjct: 440 LNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVW 499
Query: 230 ---KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
K + A L + M++ G PN Y L+ G C GR+ A++LF M G + +
Sbjct: 500 KMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEA 559
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
Y+ L+N C+ A+ L G M+ G P + N LF L+E E+A +F +
Sbjct: 560 IYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNL 619
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ G D ++ IDGL KN EL + C++ + Y LI+GL
Sbjct: 620 LQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEGL 673
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 196/405 (48%), Gaps = 12/405 (2%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
L+ + P +F L L + D SL++++ + P++ Y LI F K GR
Sbjct: 473 LDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGR 532
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
G + ++ +P+ + S + + + + ALF +++ G P+V +Y+
Sbjct: 533 KEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSI 592
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDEN 175
LI+GL + G + LF EM V G VDKA +L +MK +
Sbjct: 593 LIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKG 652
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+ P VVTY SV+ G + +EA L E GV NVV ++ ++D K G++DEA
Sbjct: 653 LQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAY 712
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+L+ ++Q G+ PN++ +N L+D ++ A+ F +M+++ C+ +YSI+ING
Sbjct: 713 LILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGL 772
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
C ++ A + EM +G+KP+ + Y T+ L + V A LFD + G D+
Sbjct: 773 CMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDS 832
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Y I+GL + ++A +F R+ C ++ + L+D L
Sbjct: 833 ACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDAL 877
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 187/392 (47%), Gaps = 13/392 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F L A+ D LSL + S DL YN+ I+CF K+G+V + +
Sbjct: 241 FTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMK 300
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
P+ VT+T+LI LC R+ EA LF +L + P V+ YNT+I G G
Sbjct: 301 AQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFD 360
Query: 140 VALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
A +L E G +G V++A + +M+ ++ P++ TY +I
Sbjct: 361 EAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMR-QDAAPNLTTYNILI 419
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
C A + A + M + G+ PN++T N+++D LCK K+DEA + +
Sbjct: 420 DMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCS 479
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P++ + +L+DG GRV+ A L+ M V Y+ LI + K E +
Sbjct: 480 PDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKI 539
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
Y EM+ +G PD+++ N+ +F+ +VE+ LF+E++ G+ D +Y I GL K
Sbjct: 540 YKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVK 599
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ E +LF ++ LD+ AYN +IDG
Sbjct: 600 AGFSRETYKLFYEMKEQGLHLDVLAYNTVIDG 631
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 205/440 (46%), Gaps = 48/440 (10%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
L++ S P V ++N + +D SL +R G P + YN ++ C + G+
Sbjct: 334 LDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGK 393
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V + +R PN T+ LI LC + A + ++ G PN+ T N
Sbjct: 394 VEEALRIHDE-MRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNI 452
Query: 128 LINGLYRTGHTIVALNLF----EEMASGNGE--------FGVEGFVDKAKELFLQMKDEN 175
+I+ L + A ++F ++ S + G G VD A L+ +M D +
Sbjct: 453 MIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSD 512
Query: 176 INPDVVTYTSVIRGF---------------------------------CY--ANDWNEAK 200
P+VV YTS+I+ F C A + + +
Sbjct: 513 QIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGR 572
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
L E+ QG+ P+V ++++++ L K G E +L M + G+ + YNT++DGF
Sbjct: 573 ALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGF 632
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
C +G+V++A +L M++ G TV +Y +++G K ++ A L+ E S G+ +V
Sbjct: 633 CKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNV 692
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
VIY++L ++ +++ A+ + +E+ + G+ +++T+ +D L K I EA F+
Sbjct: 693 VIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQN 752
Query: 381 LRILKCELDIRAYNCLIDGL 400
++ LKC + Y+ +I+GL
Sbjct: 753 MKNLKCSPNAMTYSIMINGL 772
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 187/397 (47%), Gaps = 13/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ L G L K + D + LF+ L+ P +Y YN +I + G+ + +
Sbjct: 306 PDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSL 365
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R R P+ + + ++ L + ++ EA + ++R PN+ TYN LI+ L +
Sbjct: 366 LERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ-DAAPNLTTYNILIDMLCK 424
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G AL + + M +D+A +FL + + +PD T
Sbjct: 425 AGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRT 484
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ S+I G ++A L +M+D PNVV + ++ K G+ ++ ++ M+
Sbjct: 485 FCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMV 544
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G P+ + N+ MD G V + + LF +++ G V SYSILI+G K
Sbjct: 545 HRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSR 604
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
L+ EM +G+ DV+ YNT+ + +V++A++L +EM+ G+ TY + +
Sbjct: 605 ETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVV 664
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
DGL K + EA LF + + +L++ Y+ LIDG
Sbjct: 665 DGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDG 701
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 183/397 (46%), Gaps = 19/397 (4%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNIL---FGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 57
+ +++ ML+ P V +++ F C K + ++K + G PDL N
Sbjct: 502 YSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGH----KIYKEMVHRGCSPDLMLLNS 557
Query: 58 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 117
++C K G V G + I P+ +++ LI GL E LF +++ G
Sbjct: 558 YMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQG 617
Query: 118 CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE-----FG--VEGF-----VDKAK 165
+V YNT+I+G ++G A L EEM + + +G V+G +D+A
Sbjct: 618 LHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAY 677
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
LF + K ++ +VV Y+S+I GF +EA +L E+M +G+ PN T+N ++D L
Sbjct: 678 MLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDAL 737
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
K ++DEA M + PNA Y+ +++G C+ + N+A + M+ G
Sbjct: 738 VKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNN 797
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
+Y+ +I G K + A L+ + G PD YN + L ++ A+ +F+E
Sbjct: 798 ITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEE 857
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
+ G ++ T +D L K + +A + LR
Sbjct: 858 TRLKGCRVNSKTCVVLLDALHKADCLEQAAIVGAVLR 894
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 195/462 (42%), Gaps = 81/462 (17%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+N +A+ ++ D + + + ++ G + L+ F K ++ F V+ +
Sbjct: 136 YNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMR 195
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+ F P +T+LI L A +R LF +++ G E NV + TL+ R G
Sbjct: 196 KFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRID 255
Query: 140 VALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVTYTSV- 186
AL+L +EM S + FG G VD A + F +MK + + PD VTYT++
Sbjct: 256 AALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLI 315
Query: 187 ----------------------------------IRGFCYANDWNEAKCLLIEMMDQGVQ 212
I G+ A ++EA LL +G
Sbjct: 316 GVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCI 375
Query: 213 PNVVTFN----------------------------------VIMDELCKNGKMDEASRLL 238
P+V+ +N +++D LCK G+++ A ++
Sbjct: 376 PSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNLTTYNILIDMLCKAGELEAALKVQ 435
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
D M + G+ PN N ++D C +++ A +F+ ++ C+ ++ LI+G +
Sbjct: 436 DTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRR 495
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
++ A SLY +ML P+VV+Y +L F+ + E K++ EM G + D
Sbjct: 496 GRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLL 555
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+++D + K + + LF ++ D+R+Y+ LI GL
Sbjct: 556 NSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGL 597
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 194/393 (49%), Gaps = 24/393 (6%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++ ++ P SFN LAK+ + D F F D+Y++ I I FC+ G
Sbjct: 63 LMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQF-DVYSFGITIKAFCENG 121
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
VS GF +L ++ +PN +T LI+ C I +A +F+++ G N + Y
Sbjct: 122 NVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYT 181
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
+ING ++ G + +GF EL+ +MK + P++ TY S+
Sbjct: 182 IMINGFFKKG------------------YKKDGF-----ELYQKMKLVGVLPNLYTYNSL 218
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I +C + A + E+ +GV N VT+N+++ LC+ G++ +A LL+ M + +
Sbjct: 219 ITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHI 278
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P +N LMDG C TG++++A ++ +G T+ +Y+ILI+G+ K
Sbjct: 279 NPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSE 338
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L EM +GI P V Y L +E+A+++F M+R G+ D TY I GLC
Sbjct: 339 LVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLC 398
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+VEA +L++++ + + + YN +I+G
Sbjct: 399 IKGNMVEASKLYKSMVEMHLQPNDVIYNTMING 431
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 160/332 (48%), Gaps = 23/332 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+ I+ K + L++++ G+ P+LYTYN LI +C+ G++S F V I
Sbjct: 180 YTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEIS 239
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+ NAVT+ LI GLC + ++ +A L +++ P T+N L++GL TG
Sbjct: 240 KRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQ-- 297
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
+DKA ++K + P +VTY +I GF + +
Sbjct: 298 ---------------------LDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVV 336
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
L+ EM D+G+ P+ VT+ ++M+ ++ +++A + LM +IG+ P+ Y L+ G
Sbjct: 337 SELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHG 396
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
C+ G + A +L+ SM M Y+ +INGYCK AL EM+ G+ P+
Sbjct: 397 LCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPN 456
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
V Y + +L + + A +L EM G+
Sbjct: 457 VASYISTIQILCKDGKSIEAKRLLKEMTEAGL 488
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 100/190 (52%)
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
Q +V +F + + C+NG + + LL M +GV PN F+Y L++ C G +++AK
Sbjct: 103 TQFDVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAK 162
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
+F M+ +G + Y+I+ING+ K + LY +M G+ P++ YN+L
Sbjct: 163 VMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEY 222
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
++ AFK+FDE+ + GVA + TY I GLC+ + +A L ++
Sbjct: 223 CRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTT 282
Query: 391 RAYNCLIDGL 400
R +N L+DGL
Sbjct: 283 RTFNMLMDGL 292
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/363 (31%), Positives = 169/363 (46%), Gaps = 23/363 (6%)
Query: 37 LSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 96
L + +++ G P Y L++ +C+ + +L + S P VT T ++
Sbjct: 250 LCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNA 309
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG 156
C E R+ A +F +R GCEPNV+TYN ++ G F
Sbjct: 310 YCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQG-----------------------FC 346
Query: 157 VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
G V KA L QM++ + PDVVTY +IRG C A LL M G+ +
Sbjct: 347 NAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQY 406
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
T+NV++D LCK GK+DEA L D + G+RPN+ +NT+++G C G+ + A +M
Sbjct: 407 TYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENM 466
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
S G ++YS I CK K + L EML K +KP V Y + LF
Sbjct: 467 ISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNY 526
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
A +++ +M G + D TY T + C + EA + ++ + +D AYN L
Sbjct: 527 GLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTL 586
Query: 397 IDG 399
IDG
Sbjct: 587 IDG 589
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 185/402 (46%), Gaps = 49/402 (12%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGL----FPDLY----------TYNIL 58
SPPP+ F ++ + ++L+ F R T L F +Y TYN L
Sbjct: 84 SPPPLRPFF--------DRPFRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNAL 135
Query: 59 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC 118
I C+ + H L ++RS + P+A TF SLI G C ++ A LF K+ G
Sbjct: 136 IRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGF 195
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINP 178
+ +Y LI G G AL LF EM P
Sbjct: 196 SQDAVSYAALIEGFCEAGRIDEALELFREMT---------------------------QP 228
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D+ T+ ++++G C A E C+L +M + G +P + ++D C+ K +EA ++L
Sbjct: 229 DMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKIL 288
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
+ M G+ P +++ +C GR++ A +F SM GC V++Y+ ++ G+C
Sbjct: 289 NEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNA 348
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
++ A++L +M G++PDVV YN L + AF+L M+ +G+AAD +TY
Sbjct: 349 GKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTY 408
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
ID LCK + EA LF L + +N +I+GL
Sbjct: 409 NVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGL 450
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 158/352 (44%), Gaps = 16/352 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ L + + + + + +GL P + T I++N +C+ GR+S V
Sbjct: 263 PTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRV 322
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ PN T+ ++++G C ++ +A AL ++R G EP+V TYN LI G
Sbjct: 323 FESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCI 382
Query: 135 TGHTIVALNLFEEMASGNGEFGVE-------------GFVDKAKELFLQMKDENINPDVV 181
GH A L M GNG + G VD+A LF ++ I P+ V
Sbjct: 383 DGHIGSAFRLLRLM-EGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSV 441
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
T+ +VI G C A ++ A L M+ G P+ T++ ++ LCK E +D M
Sbjct: 442 TFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEM 501
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+Q V+P+ Y +++ A ++ M S GC+ V +Y+ + YC +
Sbjct: 502 LQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRL 561
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
+ A ++ EM D + YNTL I Q +RA + M GVA+
Sbjct: 562 DEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMT--GVAS 611
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 98/449 (21%), Positives = 172/449 (38%), Gaps = 63/449 (14%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N+L + H + L + + GL D YTYN+LI+ CK G+V +
Sbjct: 368 PDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSL 427
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ PN+VTF ++I GLC + A + G P+ +TY+ I L +
Sbjct: 428 FDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCK 487
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFV------------DKAKELFLQMKDENINPDVVT 182
T + L +EM + + + A ++ QM + +PDVVT
Sbjct: 488 TKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVT 547
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+ +R +C +EA+ ++ EM + + +N ++D G+ D A +L M
Sbjct: 548 YTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMT 607
Query: 243 QIGVRPNAFV-------------------------------------------------- 252
+ PN F
Sbjct: 608 GVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSAR 667
Query: 253 -YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
Y ++++GF R++ L M+ Y+ L+N +CK + A +L M
Sbjct: 668 TYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSM 727
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
+ G P+++ Y L L Q +RA ++F + D ++ IDG + +
Sbjct: 728 IGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHA 787
Query: 372 VEAVELFRTLRILKCELDIRAYNCLIDGL 400
++ L +KC+ Y L + L
Sbjct: 788 DMCHDMISMLEQMKCKPSDETYAMLTEEL 816
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 171/396 (43%), Gaps = 31/396 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + ++L ++ G+ PD+ TYN+LI C G + F +
Sbjct: 333 PNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRL 392
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + + T+ LI LC ++ EA +LF L G PN T+NT+INGL +
Sbjct: 393 LRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCK 452
Query: 135 TGHTIVALNLFEEMASGN---GEFGVEGFVD-------KAKELFL--QMKDENINPDVVT 182
G VA E M S + F++ + LF +M +++ P V
Sbjct: 453 AGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVN 512
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT VI ++ A + +M+ QG P+VVT+ + C G++DEA ++ M
Sbjct: 513 YTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMK 572
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ +A YNTL+DG G+ +RA + M + F++ IL+ + + E
Sbjct: 573 KCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAE 632
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
V + T E+ V F+LF+ M+++ V + TY + +
Sbjct: 633 ----------------HVPLKATSVWKTIELADV---FELFELMKKNSVPSSARTYLSIL 673
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
+G + + E L ++ L+ YN L++
Sbjct: 674 EGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVN 709
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 173/351 (49%), Gaps = 23/351 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ IL L+ + V ++F+ + S L D+Y Y+ +IN +C+ G V V
Sbjct: 211 PTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEV 270
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + PN T+ +LI G C ++ A L T ++V G N +NT+I+G R
Sbjct: 271 FDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCR 330
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ VDKA E+ + M+ I DV TY ++ G AN
Sbjct: 331 -----------------------KNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRAN 367
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+EAK LL M+++GV+PN V++ ++ C G M EA RL M G P+ YN
Sbjct: 368 RMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYN 427
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+MDG+ G + A+ ME G ++SY+ L++G+C N +++ AL L+ EM +
Sbjct: 428 VMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQR 487
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
G KP++V Y L L + + E AF+L+D M DG+ D Y + L
Sbjct: 488 GSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSL 538
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 178/384 (46%), Gaps = 17/384 (4%)
Query: 32 HYDTVLSLFKRLNSTGLFPDLYT---YNILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 88
H DT L K+ ++ PD T +++++ +CK GRV+H +L + R NA+
Sbjct: 122 HLDTAADLLKQAATS--CPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNAL 179
Query: 89 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM 148
+ SL+ E A + + G EP V TY L++GL +FEEM
Sbjct: 180 CYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEM 239
Query: 149 ASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
S N V G V +A E+F + I P+ TY ++I GFC
Sbjct: 240 KSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQM 299
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
A+ L+ +M +GV N + FN ++D C+ +D+A + +M ++G+ + + YNTL
Sbjct: 300 EAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTL 359
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
G R++ AK L M G SY+ LI+ +C ++ A L+ EM G
Sbjct: 360 ACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGA 419
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+P +V YN + + + A + EM++ G+ D ++Y + G C N + A+
Sbjct: 420 EPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALR 479
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
LF ++ + ++ AY LI GL
Sbjct: 480 LFEEMKQRGSKPNLVAYTALISGL 503
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 12/229 (5%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FN + + D L + + G+ D+YTYN L + R+ +L ++
Sbjct: 321 FNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMI 380
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
PN V++T+LI C E ++EA LF ++ G EP++ TYN +++G + G
Sbjct: 381 EKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIR 440
Query: 140 VALNLFEEM------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
A +EM A+ V G VD A LF +MK P++V YT++I
Sbjct: 441 EAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALI 500
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
G EA L M+ G+ P+ ++ ++ L + K + R
Sbjct: 501 SGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKKQNVKPR 549
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 38/88 (43%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S+ L N D L LF+ + G P+L Y LI+ K GR F +
Sbjct: 456 PDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQL 515
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESR 102
+L TP+ +++L+ L + +
Sbjct: 516 YDNMLGDGLTPDDALYSALVGSLHTDKK 543
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 195/395 (49%), Gaps = 16/395 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++++L L K + ++ S+ K G P+ YN LI+ +CKMG + + G +
Sbjct: 318 TYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDM 377
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGCEPNVFTYNTLINGLYRTG 136
+ PN+VT S+I+G C ++ +A + ++ R F P FT T+I+ L
Sbjct: 378 VSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFT--TIIHWLCMNS 435
Query: 137 HTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
AL EM N G EG A EL+ ++ ++ ++VT
Sbjct: 436 RFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTN 495
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
++I G C + EA LL +M+++G + +T+N ++ CK GK++E +L M++
Sbjct: 496 ALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQ 555
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G+ P+ F YN L+ G C G+++ A L+ +S V++Y ++I+GYCK +IE
Sbjct: 556 GIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEG 615
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L+ E+L++ ++ + V+YNTL AFKL D+M+ G+ T TY + I G
Sbjct: 616 EKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHG 675
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+C + +A L +R ++ Y LI G
Sbjct: 676 MCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGG 710
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 183/391 (46%), Gaps = 26/391 (6%)
Query: 9 NMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV 68
NMRP+ + + L G L K + + L+ RL G +L T N LI+ CK G +
Sbjct: 451 NMRPNDGLLTT---LVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNM 507
Query: 69 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTL 128
+L ++L F + +T+ +LI G C E ++ E L ++ G EP+ FTYN L
Sbjct: 508 QEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLL 567
Query: 129 INGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
I+G+ R G A+NL+ E K ++ P+V TY +I
Sbjct: 568 IHGMCRIGKLDEAVNLWNEC-----------------------KSRDLVPNVYTYGVMID 604
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
G+C A+ E + L E++ Q ++ N V +N ++ C+NG EA +L D M G+ P
Sbjct: 605 GYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPP 664
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
Y++L+ G C GR+ AK L M G V Y+ LI GYCK +++ +++
Sbjct: 665 TTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVL 724
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
EM S I P+ + Y + + ++ A KL EM G+ DT TY +G CK
Sbjct: 725 QEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKE 784
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I E ++ + LD Y L+ G
Sbjct: 785 GKIEEGFKICDYMSQEGLPLDEITYTTLVHG 815
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 122/404 (30%), Positives = 189/404 (46%), Gaps = 27/404 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + L L K + +F+ + G+ PD+Y ++ IN FCK G+V +
Sbjct: 210 PTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQL 268
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + +PN VT+ +LI GLC + EA K+ G + TY+ LINGL +
Sbjct: 269 FFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMK 328
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF-------------------VDKAKELFLQMKDEN 175
L F E S E +GF + A + M +
Sbjct: 329 -------LEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKG 381
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
INP+ VT S+I+GFC +A+C+L EM+ +G N F I+ LC N + + A
Sbjct: 382 INPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESAL 441
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
R L M+ +RPN + TL+ G C G+ + A EL+ + G + + + LI+G
Sbjct: 442 RFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGL 501
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
CK ++ A+ L +ML +G D + YNTL + +VE FKL EM + G+ DT
Sbjct: 502 CKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDT 561
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+TY I G+C+ + EAV L+ + ++ Y +IDG
Sbjct: 562 FTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDG 605
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 183/398 (45%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L K+ + D +++ G+ L TY++LIN K+ + + V
Sbjct: 279 PNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSV 338
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L L FTPN V + +LI G C + +A + + G PN T N++I G +
Sbjct: 339 LKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCK 398
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFV------------DKAKELFLQMKDENINPDVVT 182
G A + EEM S F + A +M N+ P+
Sbjct: 399 IGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGL 458
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
T+++ G C ++A L ++++G N+VT N ++ LCK G M EA RLL M+
Sbjct: 459 LTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKML 518
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G + YNTL+ G C G+V +L M G F+Y++LI+G C+ +++
Sbjct: 519 ERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLD 578
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A++L+ E S+ + P+V Y + + ++E KLF E+ + ++ Y T I
Sbjct: 579 EAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLI 638
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
C+N VEA +L +R Y+ LI G+
Sbjct: 639 RAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGM 676
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 140/290 (48%), Gaps = 14/290 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N L K + L + G+ PD +TYN+LI+ C++G++ +
Sbjct: 528 TYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNEC 587
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PN T+ +I G C +I E LFT+L E N YNTLI R G+T
Sbjct: 588 KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNT 647
Query: 139 IVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
+ A L ++M S +G + G ++ AK L +M+ E + P+VV YT+
Sbjct: 648 VEAFKLHDDMRSKGIPPTTATYSSLIHGMCNI-GRMEDAKCLIDEMRKEGLLPNVVCYTA 706
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I G+C ++ +L EM + PN +T+ V++D K+G M A++LL M+ G
Sbjct: 707 LIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKG 766
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+ P+ YN L +GFC G++ ++ M G +Y+ L++G+
Sbjct: 767 IVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGW 816
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 122/240 (50%), Gaps = 1/240 (0%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
++K+ +F M+ + ++PDV +++ I FC +A L +M GV PNVVT+N
Sbjct: 228 LEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNN 286
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
++ LCK+G +DEA R + M++ GV Y+ L++G + N A + G
Sbjct: 287 LIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKG 346
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
T Y+ LI+GYCK + AL + G+M+SKGI P+ V N++ +I Q+E+A
Sbjct: 347 FTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAE 406
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +EM G + + + T I LC NS A+ R + + + L+ GL
Sbjct: 407 CILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGL 466
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 91/172 (52%), Gaps = 1/172 (0%)
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
+ ++GV P V T ++ L K +++++ + + M Q GV P+ ++++T ++ FC G+
Sbjct: 203 LANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGK 261
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
V A +LF ME +G + V +Y+ LI+G CK+ ++ A +M+ G+ ++ Y+
Sbjct: 262 VEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSV 321
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
L L ++ + A + E G + Y T IDG CK + +A+ +
Sbjct: 322 LINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRI 373
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 173/351 (49%), Gaps = 23/351 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ IL L+ + V ++F+ + S L D+Y Y+ +IN +C+ G V V
Sbjct: 135 PTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEV 194
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + PN T+ +LI G C ++ A L T ++V G N +NT+I+G R
Sbjct: 195 FDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCR 254
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ VDKA E+ + M+ I DV TY ++ G AN
Sbjct: 255 -----------------------KNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRAN 291
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+EAK LL M+++GV+PN V++ ++ C G M EA RL M G P+ YN
Sbjct: 292 RMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYN 351
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+MDG+ G + A+ ME G ++SY+ L++G+C N +++ AL L+ EM +
Sbjct: 352 VMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQR 411
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
G KP++V Y L L + + E AF+L+D M DG+ D Y + L
Sbjct: 412 GSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSL 462
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 179/384 (46%), Gaps = 17/384 (4%)
Query: 32 HYDTVLSLFKRLNSTGLFPDLYT---YNILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 88
H DT L K+ ++ PD T +++++ +CK GRV+H +L + R NA+
Sbjct: 46 HLDTAADLLKQAATS--CPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNAL 103
Query: 89 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM 148
+ SL+ E A + + G EP V TY L++GL +FEEM
Sbjct: 104 CYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEM 163
Query: 149 ASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
S N V G V +A E+F + I P+ TY ++I GFC
Sbjct: 164 KSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQM 223
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
A+ L+ +M +GV N + FN ++D C+ +D+A + +M ++G+ + + YNTL
Sbjct: 224 EAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTL 283
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
G R++ AK L M G SY+ LI+ +C ++ A L+ EM G
Sbjct: 284 ACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGA 343
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+P +V YN + + + A + +EM++ G+ D ++Y + G C N + A+
Sbjct: 344 EPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALR 403
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
LF ++ + ++ AY LI GL
Sbjct: 404 LFEEMKQRGSKPNLVAYTALISGL 427
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 12/229 (5%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FN + + D L + + G+ D+YTYN L + R+ +L ++
Sbjct: 245 FNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMI 304
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
PN V++T+LI C E ++EA LF ++ G EP++ TYN +++G + G
Sbjct: 305 EKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIR 364
Query: 140 VALNLFEEM------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
A EM A+ V G VD A LF +MK P++V YT++I
Sbjct: 365 EAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALI 424
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
G EA L M+ G+ P+ ++ ++ L + K + R
Sbjct: 425 SGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKKQNVKPR 473
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 38/88 (43%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S+ L N D L LF+ + G P+L Y LI+ K GR F +
Sbjct: 380 PDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQL 439
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESR 102
+L TP+ +++L+ L + +
Sbjct: 440 YDNMLGDGLTPDDALYSALVGSLHTDKK 467
>gi|326499175|dbj|BAK06078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 566
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 160/320 (50%), Gaps = 25/320 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V SFN++ + K L L +R++ G PD T+NIL+N C+ VS G V
Sbjct: 232 PDVWSFNVVIKGVCKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREV 291
Query: 75 LGRILRSCF-TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
L R+ R PN VT+TS+I G C R+ +A A++ + G PNV TYN LING
Sbjct: 292 LRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLING-- 349
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+G G + A ++ QM PDVVT++S+I G+C
Sbjct: 350 ---------------------YGKAGNMGSAVAVYQQMILRRCLPDVVTFSSLIDGYCRC 388
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM-IQIGVRPNAFV 252
++A + EM +QPN TF +I+ CK + EA L M ++ + P AF+
Sbjct: 389 GQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKMNMRTDIAPQAFI 448
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
YN ++D C G+V+ A + + ME GC ++Y+ILI G+C I A++ + +M+
Sbjct: 449 YNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGRIAEAVTFFHKMV 508
Query: 313 SKGIKPDVVIYNTLFVVLFE 332
G PD ++ N+ L +
Sbjct: 509 ETGCSPDSIVVNSFISCLLK 528
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 165/353 (46%), Gaps = 26/353 (7%)
Query: 51 DLYTYNILINCFCKMGRVSHGFVVL-GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
+ Y YN L++ F GRV + G I ++P+ +F +IKG+C + +A L
Sbjct: 197 EAYAYNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGVCKVGDVQKALEL 256
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL 169
++ FGC P+ T+N L+NGL R V K +E+
Sbjct: 257 VERMDEFGCSPDTVTHNILVNGLCRAKE-----------------------VSKGREVLR 293
Query: 170 QMKDENI-NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+++ + + P+VVTYTSVI G+C A +A + +M+ G PNVVT+NV+++ K
Sbjct: 294 RLQRDGVCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKA 353
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G M A + MI P+ +++L+DG+C G+++ A +++ M ++
Sbjct: 354 GNMGSAVAVYQQMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTF 413
Query: 289 SILINGYCKNKEIEGALSLYGEM-LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
I+I+ +CK AL +M + I P IYN + VL + +V+ A + EM+
Sbjct: 414 CIIIHTFCKQNRSGEALHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEME 473
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G D +TY I G C I EAV F + C D N I L
Sbjct: 474 EKGCRPDKYTYTILIIGHCMKGRIAEAVTFFHKMVETGCSPDSIVVNSFISCL 526
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLN-STGLFPDLYTYNILINCFCKMGRVSHGFV 73
P +F I+ K L K++N T + P + YN +I+ CK G+V +
Sbjct: 408 PNAHTFCIIIHTFCKQNRSGEALHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANM 467
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L + P+ T+T LI G C + RI EA F K+ GC P+ N+ I+ L
Sbjct: 468 ILIEMEEKGCRPDKYTYTILIIGHCMKGRIAEAVTFFHKMVETGCSPDSIVVNSFISCLL 527
Query: 134 RTG 136
++G
Sbjct: 528 KSG 530
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 88/212 (41%), Gaps = 38/212 (17%)
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM--------- 276
C + + S L Q+ + P+A Y ++ C +GR A +LF M
Sbjct: 103 CASSTLHLFSALHSPHSQLAMPPSAHSYRYVISLMCQSGRHTDALQLFDQMTDQSGYFPN 162
Query: 277 ---------------------------ESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
GC+ ++Y+ L++ + + ++ A++L+
Sbjct: 163 ARFLSFLSGSCAAAGLLDAAAALLSKASQFGCSIEAYAYNKLMDLFIGHGRVQDAVALFE 222
Query: 310 EMLSKGI-KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
+ G+ PDV +N + + ++ V++A +L + M G + DT T+ ++GLC+
Sbjct: 223 GWIQGGVYSPDVWSFNVVIKGVCKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRA 282
Query: 369 SYIVEAVELFRTL-RILKCELDIRAYNCLIDG 399
+ + E+ R L R C ++ Y +I G
Sbjct: 283 KEVSKGREVLRRLQRDGVCMPNVVTYTSVISG 314
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 183/384 (47%), Gaps = 17/384 (4%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
S P S+ L L ++ + L + + G+ PD+ TY LI C V
Sbjct: 90 SRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAV 149
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+L + S PN V ++ L+ G C R +F ++ G EP+V Y LI+ L
Sbjct: 150 ELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSL 209
Query: 133 YRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDV 180
R G A + + M E V EG V +A +L M ++ + PDV
Sbjct: 210 CRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDV 269
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQG---VQPNVVTFNVIMDELCKNGKMDEASRL 237
VTY ++I G + +EA LL EMM QG V+P+++TFN ++ LCK G M +A ++
Sbjct: 270 VTYNTLITGLSSVLEMDEAMALLEEMM-QGETRVRPDLMTFNSVIHGLCKIGWMRQALQV 328
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
+M + G R N +N L+ G +V +A EL M S G F+YSILING+CK
Sbjct: 329 RAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCK 388
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+++E A S EM +G++P+ V Y L + + + +A LF+EM R+ D
Sbjct: 389 MRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRN-CKLDAAA 447
Query: 358 YRTFIDGLCKNSYIVEAVELFRTL 381
Y T I G K+ A E + +
Sbjct: 448 YSTMIHGAFKSGEKKIAEEFLKDM 471
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 199/411 (48%), Gaps = 20/411 (4%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLF---PDLYTYNILINCFC 63
+L+ PS S+N + L + D L L + ++ P+ +Y L+ C
Sbjct: 46 LLSALPSVRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALC 105
Query: 64 KMGRVSHGFVVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
R + +L R ++ C P+ VT+ +LI+GLC + + A L ++ G EPNV
Sbjct: 106 ADRRAAQAVGLL-RSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNV 164
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
Y+ L++G +TG +FEEM+ E V G V KA +
Sbjct: 165 VVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDM 224
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + + P+VVTY +I C EA L M ++GVQP+VVT+N ++ L +
Sbjct: 225 MTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLE 284
Query: 231 MDEASRLLDLMIQ--IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
MDEA LL+ M+Q VRP+ +N+++ G C G + +A ++ M GC + ++
Sbjct: 285 MDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAF 344
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
++LI G + +++ A+ L EM S G++PD Y+ L ++ QVERA EM+
Sbjct: 345 NLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRH 404
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G+ + Y + +C + +A +LF + C+LD AY+ +I G
Sbjct: 405 QGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMD-RNCKLDAAAYSTMIHG 454
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 160/323 (49%), Gaps = 34/323 (10%)
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP------NVFTYNTLINGLYRTGHTI 139
+AV++ +++ LC + + AALF LRV EP N +Y TL+ L
Sbjct: 55 DAVSYNTVLAALCRQGCL--DAALFL-LRVMSHEPRLASRPNAISYTTLMRALCADRRAA 111
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
A+ L M+D + PDVVTY ++IRG C A D + A
Sbjct: 112 QAVGLLR-----------------------SMQDCGVRPDVVTYGTLIRGLCDAADVDTA 148
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
LL EM + G++PNVV ++ ++ CK G+ + ++ + M G+ P+ +Y L+D
Sbjct: 149 VELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDS 208
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
C G+V +A + M G V +Y++LIN CK + AL L M KG++PD
Sbjct: 209 LCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPD 268
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDG--VAADTWTYRTFIDGLCKNSYIVEAVEL 377
VV YNTL L + +++ A L +EM + V D T+ + I GLCK ++ +A+++
Sbjct: 269 VVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQV 328
Query: 378 FRTLRILKCELDIRAYNCLIDGL 400
+ C ++ A+N LI GL
Sbjct: 329 RAMMAENGCRCNLVAFNLLIGGL 351
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 178/420 (42%), Gaps = 55/420 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L K +++V +F+ ++ G+ PD+ Y LI+ C+ G+V V
Sbjct: 162 PNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARV 221
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + PN VT+ LI +C E + EA L + G +P+V TYNTLI GL
Sbjct: 222 MDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSS 281
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
A+ L EEM G + + PD++T+ SVI G C
Sbjct: 282 VLEMDEAMALLEEMMQG---------------------ETRVRPDLMTFNSVIHGLCKIG 320
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+A + M + G + N+V FN+++ L + K+ +A L+D M G++P++F Y+
Sbjct: 321 WMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYS 380
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMG---------------------------------- 280
L++GFC +V RA+ M G
Sbjct: 381 ILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRN 440
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
C +YS +I+G K+ E + A +M+ +G+ PD V Y+ + + + A
Sbjct: 441 CKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAE 500
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++ +M G D + + I G + +EL R + LD + + ++ L
Sbjct: 501 RVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSL 560
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 183/362 (50%), Gaps = 16/362 (4%)
Query: 36 VLSLFKRLNS---TGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTS 92
VL K LN+ G D T ++I+ FC+ G V+ +++ PN + FT+
Sbjct: 240 VLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTA 299
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN 152
LI GLC + I +A L ++ G +PNV+T+ TLI+GL + G T A LF ++ +
Sbjct: 300 LINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSD 359
Query: 153 G-------------EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
G + E +++A+ L +M+++ + P+ TYT++I G C ++ A
Sbjct: 360 GYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRA 419
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
L+ M +G PN+ T+N I+D LCK G +DEA RLL+ + G++ + Y LM
Sbjct: 420 YELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSV 479
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
C NR+ F M +G T + SY+ LI+ +C+ K+++ + L+ E +S G+ P
Sbjct: 480 HCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPT 539
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
Y ++ A KLF M G A D+ TY I GLCK S + +A L+
Sbjct: 540 KKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYD 599
Query: 380 TL 381
+
Sbjct: 600 AM 601
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 173/382 (45%), Gaps = 20/382 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +F L L K L + + G P++YT+ LI+ CK G F +
Sbjct: 292 PNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRL 351
Query: 75 LGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+++RS + PN T+T++I G C E ++ A L ++++ G PN TY TLI+G
Sbjct: 352 FLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHC 411
Query: 134 RTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVV 181
+ G+ + A L + M + +G +D+A L ++ + D V
Sbjct: 412 KVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGV 471
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT ++ C D N + +M+ G P++ ++ ++ C+ +M E+ RL +
Sbjct: 472 TYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEA 531
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ +G+ P Y +++ G+C G + A +LF M + GC +Y LI+G CK ++
Sbjct: 532 VSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKL 591
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW--TYR 359
+ A +LY M+ KG+ P V TL + A + D +++ W T
Sbjct: 592 DDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEK-----RQWIRTVN 646
Query: 360 TFIDGLCKNSYIVEAVELFRTL 381
T + LC + A F L
Sbjct: 647 TLVRKLCSEGKLDMAALFFHKL 668
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 119/246 (48%), Gaps = 1/246 (0%)
Query: 155 FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
F G + +A + ++M+++ + T V+ A+ + +EM +GV P+
Sbjct: 164 FAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPD 223
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
V+F +++ C G++ EA + L+ M++ G + ++D FC G VNR F
Sbjct: 224 CVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFW 283
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
M MG V +++ LING CK I+ A L EM+ +G KP+V + TL L +
Sbjct: 284 KMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKG 343
Query: 335 QVERAFKLFDEMQR-DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
E+AF+LF ++ R DG + TY I+G CK + A L ++ + Y
Sbjct: 344 WTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTY 403
Query: 394 NCLIDG 399
LIDG
Sbjct: 404 TTLIDG 409
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 108/215 (50%), Gaps = 1/215 (0%)
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
++ F EA +++EM +QG+ + T N ++D G ++ A + M Q G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
V P+ + ++ C GRV A++ +M G + +++I+ +C+ + +
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
+ +M+ G+ P+V+ + L L + +++AF+L +EM R G + +T+ T IDGL
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339
Query: 366 CKNSYIVEAVELF-RTLRILKCELDIRAYNCLIDG 399
CK + +A LF + +R + ++ Y +I+G
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMING 374
>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 671
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 193/399 (48%), Gaps = 24/399 (6%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP +F +N D + L R+ G PD+ Y+ L+N F + GRV
Sbjct: 244 PPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDAIE 303
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L +L PN + + + +KGLC R + L ++ C PN T++ L + L
Sbjct: 304 LLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLC 360
Query: 134 RTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVV 181
+ G A+ + E+M F +G VD A +L M +PDV+
Sbjct: 361 QNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMP---CSPDVI 417
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
++ + ++G C A W++A+ L+++M+ + +TFN+++D LC+NG+++ A + + M
Sbjct: 418 SFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQM 477
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G P+ Y++L++G G V A ELF +SM C +F Y+ ++ G C+
Sbjct: 478 PKYGCTPDIVTYSSLINGLSEQGLVESAIELF---QSMPCKPDIFGYNAVLKGLCRAARW 534
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A L M K P+ + +N L L + V+RA ++F++M + G D +TY
Sbjct: 535 EDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNAL 594
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I+G + + +A L T + C+ D +YN + GL
Sbjct: 595 INGFSEQGRLDDARRLLST---MSCKPDAVSYNSALKGL 630
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 172/388 (44%), Gaps = 61/388 (15%)
Query: 45 STGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 104
S + PD YTYN ++ C + ++ ++R+ PN VTF + I+ C +
Sbjct: 205 SMPVAPDTYTYNTVLMGLCGARQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLD 264
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKA 164
A L ++ +GC P+V Y+TL+NG F +G VD A
Sbjct: 265 RAVQLLDRMPQYGCTPDVVIYSTLVNG-----------------------FSEQGRVDDA 301
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
EL M P+ + Y + ++G C A W + L++EM+ + PN TF+++
Sbjct: 302 IELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSC 358
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL---------------------------- 256
LC+NG +D A +L+ M + G RP+A +YNTL
Sbjct: 359 LCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMPCSPDVIS 418
Query: 257 ----MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
+ G C R + A+EL V M C +++ILI+ C+N + A+ ++ +M
Sbjct: 419 FNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMP 478
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
G PD+V Y++L L E VE A +LF M D + Y + GLC+ +
Sbjct: 479 KYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMP---CKPDIFGYNAVLKGLCRAARWE 535
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
+A EL + C + +N LI+ L
Sbjct: 536 DAGELISNMARKDCPPNEITFNILINSL 563
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 162/330 (49%), Gaps = 26/330 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F++L CL +N D + + ++++ G PD YN LI F + GRV +
Sbjct: 347 PNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKL 406
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + C +P+ ++F + +KGLC R +A L ++ C T+N LI+ L +
Sbjct: 407 LNSM--PC-SPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQ 463
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G A+ +FE+M NG +G V+ A ELF M PD+
Sbjct: 464 NGRVNNAIEVFEQMPKYGCTPDIVTYSSLING-LSEQGLVESAIELFQSMP---CKPDIF 519
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y +V++G C A W +A L+ M + PN +TFN++++ LC+ G +D A + + M
Sbjct: 520 GYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQM 579
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G P+ F YN L++GF GR++ A+ L + +M C SY+ + G C+ +
Sbjct: 580 PKYGSTPDIFTYNALINGFSEQGRLDDARRL---LSTMSCKPDAVSYNSALKGLCRAERW 636
Query: 302 EGALSLYGEMLSKGIKPDVVIY---NTLFV 328
+ A + EML P+ V + N LFV
Sbjct: 637 KEAEEVVAEMLRMKCPPNEVTFKYANRLFV 666
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 172/409 (42%), Gaps = 92/409 (22%)
Query: 56 NILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV 115
NILI C R++ VL L++ + V+ +L+ G C + R+ +A L +
Sbjct: 116 NILIKKLCAQRRLADAERVLD-ALKAAGAADPVSHNTLVAGYCRDGRLADAERLLAAAGL 174
Query: 116 FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDEN 175
G NV TY TLING R+G AL L M
Sbjct: 175 SGAA-NVVTYTTLINGYCRSGRLADALALIASMP-------------------------- 207
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+ PD TY +V+ G C A W +A+ L+ EM+ PN VTF + C+NG +D A
Sbjct: 208 VAPDTYTYNTVLMGLCGARQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAV 267
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF---------------------- 273
+LLD M Q G P+ +Y+TL++GF GRV+ A EL
Sbjct: 268 QLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDAIELLNGMLCKPNTICYNAALKGLCIA 327
Query: 274 ----------VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
V M C ++S+L + C+N ++ A+ + +M G +PD VIY
Sbjct: 328 QRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIY 387
Query: 324 NTLFVVLFEIHQVERAFKLFDEM--QRDGVA----------ADTW--------------- 356
NTL E +V+ A KL + M D ++ A+ W
Sbjct: 388 NTLIYSFSEQGRVDDALKLLNSMPCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDC 447
Query: 357 -----TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
T+ ID LC+N + A+E+F + C DI Y+ LI+GL
Sbjct: 448 PLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGL 496
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 3/137 (2%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P P + +N + L + ++ L + P+ T+NILIN C+ G V
Sbjct: 513 PCKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRA 572
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
V ++ + TP+ T+ +LI G + R+ +A L + + C+P+ +YN+ + G
Sbjct: 573 IEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTM---SCKPDAVSYNSALKG 629
Query: 132 LYRTGHTIVALNLFEEM 148
L R A + EM
Sbjct: 630 LCRAERWKEAEEVVAEM 646
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 180/373 (48%), Gaps = 30/373 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLN-----STGLFPDLYTYNILINCFCKMGRVS 69
P V ++N + L K D L LF + S G PD+ +Y+ +I+ CK RV
Sbjct: 66 PNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVD 125
Query: 70 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
+ R+ PN VT++SLI GLC R+ EA +L +L+ P YN ++
Sbjct: 126 KAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVV 185
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRG 189
NG R G L EL L MK++ +++ + +++
Sbjct: 186 NGFKRQGKPSECL-----------------------ELLLHMKEKGFGINIIDFNAMLHA 222
Query: 190 FCYANDWNEAKCLLIE-MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
+ ND E C E ++ G +PNVVT+NV + LCK GK+DEA R+L M++ V P
Sbjct: 223 L-WKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTP 281
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
+ Y++++DGFC GR+++A ++F M C ++ L++G+ ++K+ A ++
Sbjct: 282 DVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVH 341
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
+M++ G P + YN L + VE A +++ +M+R D TY I LC+
Sbjct: 342 EDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRA 401
Query: 369 SYIVEAVELFRTL 381
+ EA E +
Sbjct: 402 RRVDEAKEFLDVM 414
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 163/333 (48%), Gaps = 21/333 (6%)
Query: 55 YNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLR 114
Y +IN FCK G+V F +L + + + ++LI+GLC + RI EA F +
Sbjct: 2 YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61
Query: 115 VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG-NGEFGVEGFVDKAKELFLQMKD 173
C PNV TYNT++NGL + L LF++M G E
Sbjct: 62 E-ECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCE--------------- 105
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
PDV++Y++VI C A ++A M G PNVVT++ ++D LCK ++DE
Sbjct: 106 ----PDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDE 161
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A LL + + P A YN +++GF G+ + EL + M+ G + ++ +++
Sbjct: 162 AYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLH 221
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
KN E E A + +L G KP+VV YN L + +V+ A+++ EM V
Sbjct: 222 ALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTP 281
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
D TY + IDG CK + +A ++F + + +C
Sbjct: 282 DVITYSSIIDGFCKAGRMDKADDVFTRMMVHEC 314
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 166/357 (46%), Gaps = 28/357 (7%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ FN + L KN + F+RL +G P++ TYN+ ++ CK G+V + +L
Sbjct: 213 IIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILL 272
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ S TP+ +T++S+I G C R+ +A +FT++ V C P+ T+ TL++G
Sbjct: 273 EMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHK 332
Query: 137 HTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYT 184
+ A + E+M + G++ + V+ A E++ +MK + PD TY
Sbjct: 333 KSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYA 392
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+I+ C A +EAK L M V PN + +++ LCK G++DEA +LD +++I
Sbjct: 393 PLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEI 452
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
C G + A E+ M G +Y ++ C ++ A
Sbjct: 453 ----------------CKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSA 496
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
++ + +M S+G P +V Y L + AF++F+ M G T RT
Sbjct: 497 IAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTL 553
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 177/414 (42%), Gaps = 31/414 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S++ + L K + D FKR+ + G P++ TY+ LI+ CK+ RV + +
Sbjct: 106 PDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSL 165
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P A+ + +++ G + + E L ++ G N+ +N +++ L++
Sbjct: 166 LMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWK 225
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
A FE + + V G VD+A + L+M + + PDV+T
Sbjct: 226 NDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVIT 285
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+S+I GFC A ++A + MM P+ VTF ++ ++ K EA R+ + M+
Sbjct: 286 YSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMV 345
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G P YN LMD C V A E++ M+ +Y+ LI C+ + ++
Sbjct: 346 NAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVD 405
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD------------------ 344
A M + + P+ I + L VL + +V+ A + D
Sbjct: 406 EAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVI 465
Query: 345 -EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+M GV D TY + LC + A+ F + C + Y LI
Sbjct: 466 EQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLI 519
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 143/331 (43%), Gaps = 42/331 (12%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N+ L K D + + + + PD+ TY+ +I+ FCK GR+ V
Sbjct: 246 PNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDV 305
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R++ P+ VTF +L+ G + EA + + G P + TYN L++ +
Sbjct: 306 FTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCV-- 363
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G + V+ A E++ +MK + PD TY +I+ C A
Sbjct: 364 --------------------CGADS-VESALEIYHKMKRKKRQPDANTYAPLIQCLCRAR 402
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI---------- 244
+EAK L M V PN + +++ LCK G++DEA +LD +++I
Sbjct: 403 RVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAV 462
Query: 245 ---------GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
GVRP+ Y ++ C RV+ A F M S GC + +Y++LI
Sbjct: 463 EVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEA 522
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
C + A ++ M++ G P TL
Sbjct: 523 CSADMADDAFRIFEAMVAAGFTPQAQTMRTL 553
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 117/223 (52%), Gaps = 6/223 (2%)
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+VI GFC A ++A LL EM ++GV+ +V+ + ++ LC+ G++DEA M
Sbjct: 2 YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME-----SMGCTHTVFSYSILINGYCK 297
+ PN YNT+++G C R++ ELF ME S GC V SYS +I+ CK
Sbjct: 62 E-ECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+ ++ A + M + G P+VV Y++L L ++ +V+ A+ L +++ + +
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Y ++G + E +EL ++ ++I +N ++ L
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHAL 223
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 86/154 (55%), Gaps = 6/154 (3%)
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
+Y T+++GFC G+V++A EL M+ G V +S LI G C+ I+ AL + M
Sbjct: 1 MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM 60
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR-----DGVAADTWTYRTFIDGLC 366
+ P+V+ YNT+ L + ++++ +LFD+M++ G D +Y T ID LC
Sbjct: 61 -GEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALC 119
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
K + +A E F+ +R + C ++ Y+ LIDGL
Sbjct: 120 KAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGL 153
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 188/385 (48%), Gaps = 7/385 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ + L + + LF+ + S G+ PD+YTY ILI+ FCK G +
Sbjct: 286 PDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSW 345
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + N VT+T+L+ ++ +A+ +F ++ GC PN TY+ L++GL +
Sbjct: 346 FDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCK 405
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G A ++ ++ + G + + F ++I P+VVTY ++I G C A+
Sbjct: 406 AGEIQKACEVYTKLIGTSDNVGSDFY-------FEGKHTDSIAPNVVTYGALIDGLCKAH 458
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+A+ LL M+ G +PN + ++ ++D CK GK+D A + M + G P Y
Sbjct: 459 KVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYT 518
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L+D R++ A ++ M CT V +Y+ +I+G C+ E + AL L M K
Sbjct: 519 SLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEK 578
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G P+VV Y L L + +V+ + +LF +M G A + TYR I+ C + EA
Sbjct: 579 GCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEA 638
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
L ++ ++ Y ++ G
Sbjct: 639 HSLLSEMKQTYWPKYLQGYCSVVQG 663
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 206/420 (49%), Gaps = 36/420 (8%)
Query: 14 PPPVCSFNILFGCLAKNKHYDT--VLSLFKR-----LNSTGLFPDLYTYNILINCFCKMG 66
PP ++NI G + + + +L+L ++ L S+ + + T N C C MG
Sbjct: 209 PPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTAN-FARCLCGMG 267
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ F ++ ++ F P+ T++ +I LC ++ +A LF +++ G P+V+TY
Sbjct: 268 KFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYT 327
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDE 174
LI+ + G A + F+EM S V + + +A ++F +M D
Sbjct: 328 ILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDA 387
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD----------------QGVQPNVVTF 218
P+ +TY++++ G C A + +A + +++ + PNVVT+
Sbjct: 388 GCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTY 447
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
++D LCK K+ +A LLD M+ G PN +Y+ L+DGFC G+++ A+E+F+ M
Sbjct: 448 GALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSK 507
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
G TV +Y+ LI+ K++ ++ A+ + +M+ P+VV Y + L I + ++
Sbjct: 508 CGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQK 567
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A KL M+ G + + TY IDGL K+ + +++LF + C + Y LI+
Sbjct: 568 ALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLIN 627
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 182/425 (42%), Gaps = 64/425 (15%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++ L K K +F R+ G P+ TY+ L++ CK G + V
Sbjct: 358 VVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYT 417
Query: 77 RILRSC----------------FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+++ + PN VT+ +LI GLC ++++A L + GCEP
Sbjct: 418 KLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEP 477
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELF 168
N Y+ LI+G + G A +F M+ V + +D A ++
Sbjct: 478 NHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVL 537
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
QM + + P+VVTYT++I G C + +A LL M ++G PNVVT+ ++D L K+
Sbjct: 538 SQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKS 597
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM------------ 276
GK+D + +L M G PN Y L++ C G ++ A L M
Sbjct: 598 GKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGY 657
Query: 277 ---------------------ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
ES G Y +LI+ + K +E AL L+ EM+
Sbjct: 658 CSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELS 717
Query: 316 IKPDVV---IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
++ +Y +L L Q+E+AF+L+ E+ R GV + + I GL K +
Sbjct: 718 SSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWN 777
Query: 373 EAVEL 377
EA++L
Sbjct: 778 EALQL 782
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 170/410 (41%), Gaps = 50/410 (12%)
Query: 33 YDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTS 92
+D +S R+ P++ TY L+ F K ++ ++ +++ PN F S
Sbjct: 123 FDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNS 182
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING------LYRTGHTIVALNLFE 146
L+ C A L ++ GC P YN I L +A ++E
Sbjct: 183 LVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYE 242
Query: 147 EMAS------------------GNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
EM + G G+F D A ++ M + PD TY+ VI
Sbjct: 243 EMLASSCVLNKVNTANFARCLCGMGKF------DMAFQIIKVMMGKGFVPDTSTYSKVIT 296
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
C A +A L EM GV P+V T+ +++D CK G +++A D M IG
Sbjct: 297 FLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSA 356
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
N Y L+ + ++ +A ++F M GC +YS L++G CK EI+ A +Y
Sbjct: 357 NVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVY 416
Query: 309 GEML----------------SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
+++ + I P+VV Y L L + H+V A +L D M +G
Sbjct: 417 TKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCE 476
Query: 353 ADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL--DIRAYNCLIDGL 400
+ Y IDG CK I A E+F LR+ KC + Y LID +
Sbjct: 477 PNHIIYDALIDGFCKVGKIDNAQEVF--LRMSKCGYLPTVHTYTSLIDAM 524
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 165/408 (40%), Gaps = 67/408 (16%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L LA D + K ++ +G D +T CK GR S V+
Sbjct: 38 PSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDALVM 97
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
I R F + V T +I GL S EA + ++R C PNV TY TL+ G +
Sbjct: 98 ---IEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLK 154
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ K + M E NP+ + S++ +C A
Sbjct: 155 KKQ-----------------------LGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNAR 191
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDE------------------------------ 224
D+ A LL M D G P V +N+ +
Sbjct: 192 DYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVL 251
Query: 225 -----------LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
LC GK D A +++ +M+ G P+ Y+ ++ C +V +A LF
Sbjct: 252 NKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLF 311
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
M+S+G V++Y+ILI+ +CK IE A S + EM S G +VV Y L +
Sbjct: 312 QEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKA 371
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
Q+ +A +F+ M G +T TY +DGLCK I +A E++ L
Sbjct: 372 KQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKL 419
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 165/386 (42%), Gaps = 62/386 (16%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L L K L + S G P+ Y+ LI+ FCK+G++ + V
Sbjct: 442 PNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEV 501
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R+ + + P T+TSLI + + R+ A + +++ C PNV TY +I+GL R
Sbjct: 502 FLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCR 561
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G KA +L M+++ +P+VVTYT++I G +
Sbjct: 562 IGE-----------------------CQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSG 598
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI---------- 244
+ + L I+M +G PN VT+ V+++ C G +DEA LL M Q
Sbjct: 599 KVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYC 658
Query: 245 -----------------------GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
G P A VY L+D F GR+ A EL M +
Sbjct: 659 SVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSS 718
Query: 282 THTVFS---YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
+ + S Y+ LI C ++E A LY E+ KG+ P++ ++ L L ++++
Sbjct: 719 SLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNE 778
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDG 364
A +L + +GV W DG
Sbjct: 779 ALQLCYSICDEGV---NWQSNNSFDG 801
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 181/455 (39%), Gaps = 69/455 (15%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L K K + + G P+ +N L++ +C + + +
Sbjct: 140 PNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKL 199
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF------------------ 116
L R+ P V + I +C + L +V+
Sbjct: 200 LKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANF 259
Query: 117 -----------------------GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN- 152
G P+ TY+ +I L A LF+EM S
Sbjct: 260 ARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGV 319
Query: 153 -----------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
F G +++A+ F +M+ + +VVTYT+++ + A +A
Sbjct: 320 NPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASD 379
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA----SRLLDLMIQIG------------ 245
+ M+D G PN +T++ ++D LCK G++ +A ++L+ +G
Sbjct: 380 IFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDS 439
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
+ PN Y L+DG C +V A+EL +M S GC Y LI+G+CK +I+ A
Sbjct: 440 IAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQ 499
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
++ M G P V Y +L +F+ +++ A K+ +M + TY IDGL
Sbjct: 500 EVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGL 559
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
C+ +A++L + C ++ Y LIDGL
Sbjct: 560 CRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGL 594
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 140/336 (41%), Gaps = 50/336 (14%)
Query: 112 KLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN---GEFGVEGFVD------ 162
+L+ FG P+ TYN L+ L G + + +EM+ +F V F
Sbjct: 30 ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
+ + + ++ E+ D V T +I G A+ ++EA L M PNVVT+ ++
Sbjct: 90 RWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLL 149
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
K ++ R++++M++ G PN ++N+L+ +C A +L M GC
Sbjct: 150 TGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCP 209
Query: 283 HTVFSYSILINGYCKNKEIEG------ALSLYGEMLS----------------------- 313
+Y+I I C +E+ A +Y EML+
Sbjct: 210 PGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKF 269
Query: 314 ------------KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
KG PD Y+ + L E +VE+AF LF EM+ GV D +TY
Sbjct: 270 DMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTIL 329
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
ID CK I +A F +R + C ++ Y L+
Sbjct: 330 IDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALL 365
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 17/220 (7%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ + P V ++ L L K+ D L LF ++++ G P+ TY +LIN C G
Sbjct: 574 MMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAG 633
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ +L + ++ + + S+++G + + + L +L G P Y
Sbjct: 634 LLDEAHSLLSEMKQTYWPKYLQGYCSVVQGF--SKKFIASLGLLEELESHGTVPIAPVYG 691
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGV---------------EGFVDKAKELFLQM 171
LI+ + G AL L +EM + + ++KA EL+ ++
Sbjct: 692 LLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEI 751
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
+ + P++ + +I+G N WNEA L + D+GV
Sbjct: 752 TRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEGV 791
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 81/201 (40%), Gaps = 13/201 (6%)
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
E+ D G +P+ T+N ++ L G+MD R+ M + G + F C G
Sbjct: 30 ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89
Query: 265 RVNRA-----KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
R + A +E F ++++ CT +I+G + + A+S M P+
Sbjct: 90 RWSDALVMIEREDF-KLDTVLCTQ-------MISGLMEASLFDEAISFLHRMRCNSCIPN 141
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
VV Y TL + Q+ ++ + M ++G + + + + C A +L +
Sbjct: 142 VVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLK 201
Query: 380 TLRILKCELDIRAYNCLIDGL 400
+ C AYN I +
Sbjct: 202 RMADCGCPPGYVAYNIFIGSI 222
>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
Length = 607
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 192/404 (47%), Gaps = 18/404 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG--LFPDLYTYNILINCFCKMGRVSHGF 72
P + ++ IL L K L + R++S G + D+ N +++ CK+GR+
Sbjct: 164 PDIVTYGILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAI 223
Query: 73 VVLGRILRSCF--TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
V + +R PN VT+ L C I A + ++ G PNV T NT++
Sbjct: 224 VFVDERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVG 283
Query: 131 GLYRTGHTIVALNLFEEM------ASGNG---EFGVEGF-----VDKAKELFLQMKDENI 176
GL R G AL+ F E A GN V F V A ELF +M D+
Sbjct: 284 GLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGY 343
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
PD V Y ++I G A +A + M G + + +N+++ C+ ++ EA +
Sbjct: 344 PPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQ 403
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
L + M G++P+ + YNTL+ C G + EL +M GC +V ++ L++GYC
Sbjct: 404 LFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYC 463
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K + + AL ++ M I+P+ VIYNTL L + +V+ A KLFDEM+ + V A+
Sbjct: 464 KAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVT 523
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY + GL + +A EL ++ +C D + L++ L
Sbjct: 524 TYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLMEWL 567
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 165/350 (47%), Gaps = 18/350 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L + D + +R+ G+ P++ T N ++ C++GRV
Sbjct: 238 PNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDF 297
Query: 75 LGRILRSCFTP---NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
R R+ + NAVT+++L+ + + A LF ++ G P+ Y T+I+G
Sbjct: 298 F-REKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISG 356
Query: 132 LYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPD 179
L + G + A N+ M G F + + +A +LF +MK + PD
Sbjct: 357 LTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPD 416
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
V TY +++ C A D++ LL M+D G QP+VVTF ++ CK GK DEA ++
Sbjct: 417 VYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFR 476
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M + ++PN +YNTL+D C + V+ A +LF M V +Y+ L+ G
Sbjct: 477 SMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKN 536
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
E A L +M + PD V + L L EI + ER K F E QRD
Sbjct: 537 MPEKAFELMDQMKEERCTPDYVTMDVLMEWLPEIGETER-LKCFME-QRD 584
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 98/204 (48%), Gaps = 12/204 (5%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++NIL G + K LF+ + GL PD+YTYN L++C CK G S +LG +
Sbjct: 384 AYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNM 443
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ P+ VTF +L+ G C + EA +F + +PN YNTLI+ L ++
Sbjct: 444 IDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREV 503
Query: 139 IVALNLFEEMASGNGEFGV-------EGFVDK-----AKELFLQMKDENINPDVVTYTSV 186
VA+ LF+EM N V +G DK A EL QMK+E PD VT +
Sbjct: 504 DVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVL 563
Query: 187 IRGFCYANDWNEAKCLLIEMMDQG 210
+ + KC + + ++G
Sbjct: 564 MEWLPEIGETERLKCFMEQRDEKG 587
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 41/263 (15%)
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
PDV T+ S++ A + L M + V+P++VT+ ++++ LCK G + +A ++
Sbjct: 129 PDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKV 188
Query: 238 LDLMIQIGV---------------------------------------RPNAFVYNTLMD 258
LD M G PN YN L D
Sbjct: 189 LDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLAD 248
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI-- 316
C G ++ A ++ ME G T V + + ++ G C+ + AL + E + +
Sbjct: 249 ACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEA 308
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+ + V Y+TL + V A +LF EM G D Y T I GL + +V+A
Sbjct: 309 RGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACN 368
Query: 377 LFRTLRILKCELDIRAYNCLIDG 399
+ +++ +LD +AYN LI G
Sbjct: 369 IAASMKKAGFKLDRKAYNILIGG 391
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 4/173 (2%)
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
D AS L D + P+ +N+L+ G + ELF SM + +Y IL
Sbjct: 113 DAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGIL 172
Query: 292 INGYCKNKEIEGALSLYGEMLSKG--IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
+N CK + AL + M S G + D+VI NT+ L +I +++ A DE R
Sbjct: 173 LNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQ 232
Query: 350 --GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G A +T TY D C+ I A ++ + ++ N ++ GL
Sbjct: 233 VHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGL 285
>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
Length = 439
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 176/368 (47%), Gaps = 29/368 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNST-GLFPDLYTYNILINCFCKMGRVSHGFV 73
P V + NIL + + D L LF + L P+ TY +I C+CKM R+
Sbjct: 68 PSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQ 127
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPNVFTYNTLINGL 132
+L SC + + + TS+ +G C R+ EA L + +P++ +N +I+G
Sbjct: 128 LLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGF 185
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ G A + E + S G V P+ VTYT++I GFC
Sbjct: 186 CKAGRVREAYEMLETLVSM-------GCV----------------PNAVTYTTLIDGFCK 222
Query: 193 ANDWNEAKCL--LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
+ + +EA L ++ D +PNVVTFN ++ LCK +++ A L+ M +R +
Sbjct: 223 SGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADT 282
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
F Y TLMDG C GR + +F M GC +V +Y+ L++ +CK ++ A +
Sbjct: 283 FTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRS 342
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M++KGI PDV Y L LFE +V A + F+++ R+ Y + G CK +
Sbjct: 343 MVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAAL 402
Query: 371 IVEAVELF 378
+ EAV+ +
Sbjct: 403 VDEAVKYY 410
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 183/368 (49%), Gaps = 23/368 (6%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
P+ +T+++LI CK GR+ ++L PN L+ LC ++ +A A+
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF--------- 160
F R C P+V T N LING AL LF EM N E
Sbjct: 61 F---RGIQCSPSVITLNILINGFCELQLLDKALELFHEM-EKNFALVPEATTYTAIIKCY 116
Query: 161 -----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ-GVQPN 214
+D+A++L + + DV+ TSV RGFC A +EA LL++M+++ +P+
Sbjct: 117 CKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPD 174
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF- 273
+V +NVI+ CK G++ EA +L+ ++ +G PNA Y TL+DGFC +G ++ A +LF
Sbjct: 175 IVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFK 234
Query: 274 -VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
+S V +++ LI+G CK +E A L +M ++ ++ D Y TL L +
Sbjct: 235 VLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCK 294
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
+ ++F+EM R+G TY T + CK + +A ++ R++ D+
Sbjct: 295 QGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTT 354
Query: 393 YNCLIDGL 400
Y L++GL
Sbjct: 355 YTVLLEGL 362
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 137/295 (46%), Gaps = 27/295 (9%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ + + P + ++N++ K + + L S G P+ TY LI+ FCK G
Sbjct: 165 MVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSG 224
Query: 67 RVSHGFVVLGRILRS---CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+S + ++L S PN VTF +LI GLC R+ A L +++ + F
Sbjct: 225 NLSEALQLF-KVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTF 283
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
TY TL++GL + G T +FEEM E NP VVTY
Sbjct: 284 TYTTLMDGLCKQGRTSEVSRVFEEMLR-----------------------EGCNPSVVTY 320
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
T+++ C A +A+ ++ M+ +G+ P+V T+ V+++ L +NGK+ A+ + +++
Sbjct: 321 TTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILR 380
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
P A VY+ L+ G C V+ A + +V M + +L+ CK
Sbjct: 381 ERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKR 435
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 111/232 (47%), Gaps = 14/232 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLF--PDLYTYNILINCFCKMGRVSHGF 72
P ++ L K+ + L LFK L+S P++ T+N LI+ CK R+ H F
Sbjct: 208 PNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAF 267
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
++ ++ + T+T+L+ GLC + R E + +F ++ GC P+V TY TL++
Sbjct: 268 ELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAH 327
Query: 133 YRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDV 180
+ G A + M + V G V A E F ++ E P
Sbjct: 328 CKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCA 387
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 232
V Y++++RG C A +EA +EM+D+ + P+ T ++++ LCK G+ D
Sbjct: 388 VVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 195/395 (49%), Gaps = 16/395 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++++L L K + ++ S+ K G P+ YN LI+ +CKMG + + G +
Sbjct: 385 TYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDM 444
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGCEPNVFTYNTLINGLYRTG 136
+ PN+VT S+I+G C ++ +A + ++ R F P FT T+I+ L
Sbjct: 445 VSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFT--TIIHWLCMNS 502
Query: 137 HTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
AL EM N G EG A EL+ ++ ++ ++VT
Sbjct: 503 RFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTN 562
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
++I G C + EA LL +M+++G + +T+N ++ CK GK++E +L M++
Sbjct: 563 ALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQ 622
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G+ P+ F YN L+ G C G+++ A L+ +S V++Y ++I+GYCK +IE
Sbjct: 623 GIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEG 682
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L+ E+L++ ++ + V+YNTL AFKL D+M+ G+ T TY + I G
Sbjct: 683 EKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHG 742
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+C + +A L +R ++ Y LI G
Sbjct: 743 MCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGG 777
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 122/404 (30%), Positives = 189/404 (46%), Gaps = 27/404 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + L L K + +F+ + G+ PD+Y ++ IN FCK G+V +
Sbjct: 277 PTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQL 335
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + +PN VT+ +LI GLC + EA K+ G + TY+ LINGL +
Sbjct: 336 FFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMK 395
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF-------------------VDKAKELFLQMKDEN 175
L F E S E +GF + A + M +
Sbjct: 396 -------LEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKG 448
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
INP+ VT S+I+GFC +A+C+L EM+ +G N F I+ LC N + + A
Sbjct: 449 INPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESAL 508
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
R L M+ +RPN + TL+ G C G+ + A EL+ + G + + + LI+G
Sbjct: 509 RFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGL 568
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
CK ++ A+ L +ML +G D + YNTL + +VE FKL EM + G+ DT
Sbjct: 569 CKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDT 628
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+TY I G+C+ + EAV L+ + ++ Y +IDG
Sbjct: 629 FTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDG 672
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/366 (30%), Positives = 174/366 (47%), Gaps = 26/366 (7%)
Query: 9 NMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV 68
NMRP+ + + L G L K + + L+ RL G +L T N LI+ CK G +
Sbjct: 518 NMRPNDGLLTT---LVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNM 574
Query: 69 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTL 128
+L ++L F + +T+ +LI G C E ++ E L ++ G EP+ FTYN L
Sbjct: 575 QEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLL 634
Query: 129 INGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
I+G+ R G A+NL+ E K ++ P+V TY +I
Sbjct: 635 IHGMCRIGKLDEAVNLWNEC-----------------------KSRDLVPNVYTYGVMID 671
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
G+C A+ E + L E++ Q ++ N V +N ++ C+NG EA +L D M G+ P
Sbjct: 672 GYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPP 731
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
Y++L+ G C GR+ AK L M G V Y+ LI GYCK +++ +++
Sbjct: 732 TTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVL 791
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
EM S I P+ + Y + + ++ A KL EM G+ DT TY +G CK
Sbjct: 792 QEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKE 851
Query: 369 SYIVEA 374
I E
Sbjct: 852 GKIEEG 857
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 183/398 (45%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L K+ + D +++ G+ L TY++LIN K+ + + V
Sbjct: 346 PNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSV 405
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L L FTPN V + +LI G C + +A + + G PN T N++I G +
Sbjct: 406 LKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCK 465
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFV------------DKAKELFLQMKDENINPDVVT 182
G A + EEM S F + A +M N+ P+
Sbjct: 466 IGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGL 525
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
T+++ G C ++A L ++++G N+VT N ++ LCK G M EA RLL M+
Sbjct: 526 LTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKML 585
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G + YNTL+ G C G+V +L M G F+Y++LI+G C+ +++
Sbjct: 586 ERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLD 645
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A++L+ E S+ + P+V Y + + ++E KLF E+ + ++ Y T I
Sbjct: 646 EAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLI 705
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
C+N VEA +L +R Y+ LI G+
Sbjct: 706 RAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGM 743
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 176/398 (44%), Gaps = 24/398 (6%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
CI + ML+ S P +F + L N +++ L + + + P+ L+
Sbjct: 474 CILEEMLSRGFSINP-GAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGG 532
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK G+ S + R+L F N VT +LI GLC + EA L K+ G +
Sbjct: 533 LCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLD 592
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
TYNTLI+G + EG V++ +L +M + I PD
Sbjct: 593 KITYNTLISGCCK-----------------------EGKVEEGFKLRGEMVKQGIEPDTF 629
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY +I G C +EA L E + + PNV T+ V++D CK K++E +L +
Sbjct: 630 TYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTEL 689
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ + N+ VYNTL+ +C G A +L M S G T +YS LI+G C +
Sbjct: 690 LTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRM 749
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A L EM +G+ P+VV Y L ++ Q+++ + EM + + TY
Sbjct: 750 EDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVM 809
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
IDG K+ + A +L + D YN L +G
Sbjct: 810 IDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNG 847
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 130/267 (48%), Gaps = 14/267 (5%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N L K + L + G+ PD +TYN+LI+ C++G++ +
Sbjct: 595 TYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNEC 654
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PN T+ +I G C +I E LFT+L E N YNTLI R G+T
Sbjct: 655 KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNT 714
Query: 139 IVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
+ A L ++M S +G + G ++ AK L +M+ E + P+VV YT+
Sbjct: 715 VEAFKLHDDMRSKGIPPTTATYSSLIHGMCNI-GRMEDAKCLIDEMRKEGLLPNVVCYTA 773
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I G+C ++ +L EM + PN +T+ V++D K+G M A++LL M+ G
Sbjct: 774 LIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKG 833
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKEL 272
+ P+ YN L +GFC G++ K L
Sbjct: 834 IVPDTVTYNVLTNGFCKEGKIEEGKLL 860
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 122/240 (50%), Gaps = 1/240 (0%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
++K+ +F M+ + ++PDV +++ I FC +A L +M GV PNVVT+N
Sbjct: 295 LEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNN 353
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
++ LCK+G +DEA R + M++ GV Y+ L++G + N A + G
Sbjct: 354 LIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKG 413
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
T Y+ LI+GYCK + AL + G+M+SKGI P+ V N++ +I Q+E+A
Sbjct: 414 FTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAE 473
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +EM G + + + T I LC NS A+ R + + + L+ GL
Sbjct: 474 CILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGL 533
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 117/237 (49%), Gaps = 12/237 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N+L + + D ++L+ S L P++YTY ++I+ +CK ++ G +
Sbjct: 626 PDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKL 685
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+L N+V + +LI+ C +EA L +R G P TY++LI+G+
Sbjct: 686 FTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCN 745
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G A L +EM G + G +DK + +M +I+P+ +T
Sbjct: 746 IGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKIT 805
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
YT +I G+ + D A LL EM+ +G+ P+ VT+NV+ + CK GK++E L +
Sbjct: 806 YTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAE 862
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 91/172 (52%), Gaps = 1/172 (0%)
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
+ ++GV P V T ++ L K +++++ + + M Q GV P+ ++++T ++ FC G+
Sbjct: 270 LANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGK 328
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
V A +LF ME +G + V +Y+ LI+G CK+ ++ A +M+ G+ ++ Y+
Sbjct: 329 VEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSV 388
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
L L ++ + A + E G + Y T IDG CK + +A+ +
Sbjct: 389 LINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRI 440
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 179/365 (49%), Gaps = 23/365 (6%)
Query: 35 TVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 94
T+ + + + G P + YNILIN FCK G + ++ I + P V+F +LI
Sbjct: 206 TIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLI 265
Query: 95 KGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE 154
GLC + E L + P+VFTY+ LI+GL +
Sbjct: 266 NGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCK-------------------- 305
Query: 155 FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
EG +D A++LF +M+ + P+ +T+T++I G + + A +M+ GV+P+
Sbjct: 306 ---EGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPD 362
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
+V +N +++ LCK G +++A +L+D M +G++P+ Y TL+DG+C G + A E+
Sbjct: 363 LVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRK 422
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
M G +++ LI+G+C++ + A EM+ G+KPD Y + +
Sbjct: 423 GMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKG 482
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
V+ FKL EMQ +G TY ++GLCK + A L + L D YN
Sbjct: 483 NVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYN 542
Query: 395 CLIDG 399
L++G
Sbjct: 543 ILLEG 547
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 178/365 (48%), Gaps = 23/365 (6%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP V +NIL K +F + GL P ++N LIN CK + GF
Sbjct: 220 PPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFR 279
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ + + P+ T++ LI GLC E R+ A LF +++ G PN T+ LI+G Y
Sbjct: 280 LKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQY 339
Query: 134 RTGHTIVALNLFEEMASGNGEFGVE----------------GFVDKAKELFLQMKDENIN 177
R+ A+N + +M + GV+ G V+KA++L +MK +
Sbjct: 340 RSRRMDSAMNTYHQMLT----MGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMK 395
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
PD +TYT++I G+C D A + M ++GV + V F ++ C++G++ +A R
Sbjct: 396 PDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERT 455
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
L M++ G++P+ Y ++DG+C G V +L M+ G V +Y++L+NG CK
Sbjct: 456 LREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCK 515
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+++ A L ML+ G+ PD + YN L + + E KL +E G+ D
Sbjct: 516 QGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE---KGLIVDYAY 572
Query: 358 YRTFI 362
Y + +
Sbjct: 573 YTSLV 577
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 158/323 (48%), Gaps = 23/323 (7%)
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
IL F P + LI C E I +A +F ++R G P ++NTLINGL ++ +
Sbjct: 214 ILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRN 273
Query: 138 TIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
+D+ L M++ I PDV TY+ +I G C +
Sbjct: 274 -----------------------LDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLD 310
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
A+ L EM +G++PN +TF ++D ++ +MD A M+ +GV+P+ +YNTL+
Sbjct: 311 VAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLL 370
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
+G C G VN+A++L M+ +G +Y+ LI+GYCK ++E A+ + M +G+
Sbjct: 371 NGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVV 430
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
D V + L +V A + EM G+ D TY IDG CK + +L
Sbjct: 431 LDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKL 490
Query: 378 FRTLRILKCELDIRAYNCLIDGL 400
+ ++I + + YN L++GL
Sbjct: 491 LKEMQINGHKPGVITYNVLMNGL 513
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 164/321 (51%), Gaps = 13/321 (4%)
Query: 92 SLIKGLCAESRIMEAAALFTK-LRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS 150
S+I+ L + AA++F L G + F ++ L+ + +G A+ F + +
Sbjct: 122 SIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRN 181
Query: 151 GNGEFGVEG---FVDKA---------KELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
N + G +DK + ++ + P V Y +I FC +
Sbjct: 182 SNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRD 241
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
AK + E+ +G++P V+FN +++ LCK+ +DE RL M + + P+ F Y+ L+
Sbjct: 242 AKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIH 301
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G C GR++ A++LF M+ G +++ LI+G +++ ++ A++ Y +ML+ G+KP
Sbjct: 302 GLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKP 361
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
D+V+YNTL L ++ V +A KL DEM+ G+ D TY T IDG CK + A+E+
Sbjct: 362 DLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIR 421
Query: 379 RTLRILKCELDIRAYNCLIDG 399
+ + LD A+ LI G
Sbjct: 422 KGMNEEGVVLDNVAFTALISG 442
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 139/296 (46%), Gaps = 27/296 (9%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M R P +F L +++ D+ ++ + ++ + G+ PDL YN L+N
Sbjct: 315 LFDEM-QQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGL 373
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK+G V+ ++ + P+ +T+T+LI G C E + A + + G +
Sbjct: 374 CKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDN 433
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+ LI+G R +G V A+ +M + + PD T
Sbjct: 434 VAFTALISGFCR-----------------------DGRVRDAERTLREMVEAGMKPDDAT 470
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT VI G+C + LL EM G +P V+T+NV+M+ LCK G+M A+ LL+ M+
Sbjct: 471 YTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAML 530
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
+GV P+ YN L++G C G +A++L G Y+ L++ Y K+
Sbjct: 531 NLGVTPDDITYNILLEGHCKNG---KAEDLLKLRNEKGLIVDYAYYTSLVSEYNKS 583
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 80/176 (45%)
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
+ + GK AS ++ G R + FV++ LM + +G V+ A + F + +
Sbjct: 128 VSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIP 187
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
L++ + + Y E+L G P V YN L + + A +F+
Sbjct: 188 FHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFN 247
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
E+++ G+ T ++ T I+GLCK+ + E L +T+ + D+ Y+ LI GL
Sbjct: 248 EIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGL 303
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 173/351 (49%), Gaps = 23/351 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ IL L+ + V ++F+ + S L D+Y Y+ +IN +C+ G V V
Sbjct: 211 PTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEV 270
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + PN T+ +LI G C ++ A L T ++V G N +NT+I+G R
Sbjct: 271 FDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCR 330
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ VDKA E+ + M+ I DV TY ++ G AN
Sbjct: 331 -----------------------KNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRAN 367
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+EAK LL M+++GV+PN V++ ++ C G M EA RL M G P+ YN
Sbjct: 368 RMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYN 427
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+MDG+ G + A+ ME G ++SY+ L++G+C N +++ AL L+ EM +
Sbjct: 428 VMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQR 487
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
G KP++V Y L L + + E AF+L+D M DG+ D Y + L
Sbjct: 488 GSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSL 538
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 179/384 (46%), Gaps = 17/384 (4%)
Query: 32 HYDTVLSLFKRLNSTGLFPDLYT---YNILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 88
H DT L K+ ++ PD T +++++ +CK GRV+H +L + R NA+
Sbjct: 122 HLDTAADLLKQAATS--CPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNAL 179
Query: 89 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM 148
+ SL+ E A + + G EP V TY L++GL +FEEM
Sbjct: 180 CYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEM 239
Query: 149 ASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
S N V G V +A E+F + I P+ TY ++I GFC
Sbjct: 240 KSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQM 299
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
A+ L+ +M +GV N + FN ++D C+ +D+A + +M ++G+ + + YNTL
Sbjct: 300 EAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTL 359
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
G R++ AK L M G SY+ LI+ +C ++ A L+ EM G
Sbjct: 360 ACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGA 419
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+P +V YN + + + A + +EM++ G+ D ++Y + G C N + A+
Sbjct: 420 EPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALR 479
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
LF ++ + ++ AY LI GL
Sbjct: 480 LFEEMKQRGSKPNLVAYTALISGL 503
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 12/229 (5%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FN + + D L + + G+ D+YTYN L + R+ +L ++
Sbjct: 321 FNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMI 380
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
PN V++T+LI C E ++EA LF ++ G EP++ TYN +++G + G
Sbjct: 381 EKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIR 440
Query: 140 VALNLFEEM------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
A EM A+ V G VD A LF +MK P++V YT++I
Sbjct: 441 EAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALI 500
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
G EA L M+ G+ P+ ++ ++ L + K + R
Sbjct: 501 SGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKKQNVKPR 549
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 38/88 (43%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S+ L N D L LF+ + G P+L Y LI+ K GR F +
Sbjct: 456 PDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQL 515
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESR 102
+L TP+ +++L+ L + +
Sbjct: 516 YDNMLGDGLTPDDALYSALVGSLHTDKK 543
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 176/368 (47%), Gaps = 29/368 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNST-GLFPDLYTYNILINCFCKMGRVSHGFV 73
P V + NIL + + D L LF + L P+ TY +I C+CKM R+
Sbjct: 68 PSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQ 127
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPNVFTYNTLINGL 132
+L SC + + + TS+ +G C R+ EA L + +P++ +N +I+G
Sbjct: 128 LLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGF 185
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ G A + E + S G V P+ VTYT++I GFC
Sbjct: 186 CKAGRVREAYEMLETLVSM-------GCV----------------PNAVTYTTLIDGFCK 222
Query: 193 ANDWNEAKCL--LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
+ + +EA L ++ D +PNVVTFN ++ LCK +++ A L+ M +R +
Sbjct: 223 SGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADT 282
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
F Y TLMDG C GR + +F M GC +V +Y+ L++ +CK ++ A +
Sbjct: 283 FTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRS 342
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M++KGI PDV Y L LFE +V A + F+++ R+ Y + G CK +
Sbjct: 343 MVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAAL 402
Query: 371 IVEAVELF 378
+ EAV+ +
Sbjct: 403 VDEAVKYY 410
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 182/368 (49%), Gaps = 23/368 (6%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
P+ +T+++LI CK GR+ ++L PN L+ LC + +A A+
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF--------- 160
F R C P+V T N LING AL LF EM N E
Sbjct: 61 F---RGIQCSPSVITLNILINGFCELQLLDKALELFHEM-EKNFALVPEATTYTAIIKCY 116
Query: 161 -----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ-GVQPN 214
+D+A++L + + DV+ TSV RGFC A +EA LL++M+++ +P+
Sbjct: 117 CKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPD 174
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF- 273
+V +NVI+ CK G++ EA +L+ ++ +G PNA Y TL+DGFC +G ++ A +LF
Sbjct: 175 IVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFK 234
Query: 274 -VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
+S V +++ LI+G CK +E A L +M ++ ++ D Y TL L +
Sbjct: 235 VLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCK 294
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
+ ++F+EM R+G TY T + CK + +A ++ R++ D+
Sbjct: 295 QGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTT 354
Query: 393 YNCLIDGL 400
Y L++GL
Sbjct: 355 YTVLLEGL 362
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 137/295 (46%), Gaps = 27/295 (9%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ + + P + ++N++ K + + L S G P+ TY LI+ FCK G
Sbjct: 165 MVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSG 224
Query: 67 RVSHGFVVLGRILRS---CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+S + ++L S PN VTF +LI GLC R+ A L +++ + F
Sbjct: 225 NLSEALQLF-KVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTF 283
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
TY TL++GL + G T +FEEM E NP VVTY
Sbjct: 284 TYTTLMDGLCKQGRTSEVSRVFEEMLR-----------------------EGCNPSVVTY 320
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
T+++ C A +A+ ++ M+ +G+ P+V T+ V+++ L +NGK+ A+ + +++
Sbjct: 321 TTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILR 380
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
P A VY+ L+ G C V+ A + +V M + +L+ CK
Sbjct: 381 ERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKR 435
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 111/232 (47%), Gaps = 14/232 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLF--PDLYTYNILINCFCKMGRVSHGF 72
P ++ L K+ + L LFK L+S P++ T+N LI+ CK R+ H F
Sbjct: 208 PNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAF 267
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
++ ++ + T+T+L+ GLC + R E + +F ++ GC P+V TY TL++
Sbjct: 268 ELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAH 327
Query: 133 YRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDV 180
+ G A + M + V G V A E F ++ E P
Sbjct: 328 CKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCA 387
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 232
V Y++++RG C A +EA +EM+D+ + P+ T ++++ LCK G+ D
Sbjct: 388 VVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 177/364 (48%), Gaps = 23/364 (6%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 95
+S+F + + G PD + Y +++ C GR +L + F PN V + +LI
Sbjct: 161 AMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALID 220
Query: 96 GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEF 155
G C + A +F ++ V GC PNV TY LI+G ++
Sbjct: 221 GYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRK------------------ 262
Query: 156 GVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNV 215
+D+A LF +M D + P+VVTYT++I+G C + A LL M + G+ PN
Sbjct: 263 -----LDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNE 317
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
T +V++D LCK+ ++ EA LL +IQ G++ N VY +L+DG C GR A L +
Sbjct: 318 WTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQT 377
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
+ S G +YS LI+G C+ KE+ A+ + +M+ KG++P V Y + L
Sbjct: 378 LVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVG 437
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
+ + K+ D+M G+ D +TY F+ C + +A + + ++ YN
Sbjct: 438 ADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNA 497
Query: 396 LIDG 399
LI G
Sbjct: 498 LICG 501
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 175/376 (46%), Gaps = 39/376 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L K++ D + LF R+ GL P++ TY LI C G++ + +
Sbjct: 245 PNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRL 304
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + S PN T + LI LC R+ EA L L G + N Y +LI+GL +
Sbjct: 305 LQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCK 364
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G A L + + S +GFV PD TY+S+I G C
Sbjct: 365 AGRFAAADRLMQTLVS-------QGFV----------------PDAHTYSSLIDGLCRQK 401
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ +EA +L +MM++GVQP+ VT+ +I+DEL + D + ++LD MI G++P+ F Y
Sbjct: 402 ELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYT 461
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+ +C GR+ A+ + + M G + +Y+ LI GY A S + M++
Sbjct: 462 IFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVAN 521
Query: 315 GIKPDVVIYNTLF----------------VVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
G KP+ Y L V +++I +++ L +EM + + ++ Y
Sbjct: 522 GCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIY 581
Query: 359 RTFIDGLCKNSYIVEA 374
F+ LC+ + EA
Sbjct: 582 NCFLTSLCRVDRLDEA 597
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 181/430 (42%), Gaps = 63/430 (14%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L + D L + + ++GL P+ +T ++LI+ CK RV ++
Sbjct: 280 PNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLL 339
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
LG +++ N + +TSLI GLC R A L L G P+ TY++LI+GL R
Sbjct: 340 LGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCR 399
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
A+ + ++M E E D +K++ +M I PDV T
Sbjct: 400 QKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFT 459
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM----------------DELC 226
YT +R +C+ +A+ +++ M+D GV PN+VT+N ++ +
Sbjct: 460 YTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMV 519
Query: 227 KNG-KMDEASR----------------------------------LLDLMIQIGVRPNAF 251
NG K +E S LL+ M+++ +
Sbjct: 520 ANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEID 579
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
+YN + C R++ AK L + M+S T + Y+ +I C+ K + AL+ M
Sbjct: 580 IYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSM 639
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
+ G P + Y + L E ++ A ++F +M + +R IDGL + Y+
Sbjct: 640 VKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYV 699
Query: 372 VEAVELFRTL 381
E L +
Sbjct: 700 AECSSLLSVM 709
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 145/315 (46%), Gaps = 23/315 (7%)
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
N T+T+LI C + + + L G P+ Y + + G R G A LF
Sbjct: 71 NLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLF 130
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
M + G V A TYT+++ G C A EA +
Sbjct: 131 VLMP-------LRGCVRTA----------------FTYTALLHGLCGAGMVREAMSVFAG 167
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M G P+ + ++ LC G+ EA LL + G PN VYN L+DG+C G
Sbjct: 168 MQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGD 227
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
+ A ++F M+ GC+ V +Y+ LI+G+CK+++++ A+ L+ M+ G+ P+VV Y
Sbjct: 228 LELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTA 287
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L Q++ A++L M+ G+ + WT ID LCK+ + EA L +L
Sbjct: 288 LIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKG 347
Query: 386 CELDIRAYNCLIDGL 400
+++ Y LIDGL
Sbjct: 348 IKVNEIVYTSLIDGL 362
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 139/330 (42%), Gaps = 20/330 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M+ P PV ++ I+ L + D + ++ + G+ PD++TY I + +
Sbjct: 409 VLDDMMEKGVQPSPV-TYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSY 467
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C GR+ ++ ++ PN VT+ +LI G +A + F + GC+PN
Sbjct: 468 CHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNE 527
Query: 123 FTYNTLINGLYRTGHT------IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI 176
+Y L+ L + + V++ EM +G L +M +
Sbjct: 528 ESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHG-------------LLEEMVKLQL 574
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
++ Y + C + +EAK LLIEM + P+ + I+ C+ + EA
Sbjct: 575 PSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALT 634
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+D M++ G P Y ++ C G + AK++F M S + ++ ILI+G
Sbjct: 635 FVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLL 694
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ + SL M K +P +Y L
Sbjct: 695 QKGYVAECSSLLSVMEEKNYRPSDALYARL 724
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/185 (19%), Positives = 65/185 (35%), Gaps = 23/185 (12%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P + +N L + D L + S L P Y +I C C++ ++
Sbjct: 575 PSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALT 634
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ +++S + P ++ +I LC E I A +F + + LI+GL
Sbjct: 635 FVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLL 694
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ +G+V + L M+++N P Y + A
Sbjct: 695 Q-----------------------KGYVAECSSLLSVMEEKNYRPSDALYARLTGKITDA 731
Query: 194 NDWNE 198
ND E
Sbjct: 732 NDIQE 736
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 195/394 (49%), Gaps = 13/394 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
SF++L A + L++F + G P L + N L+N + G +V G++
Sbjct: 150 SFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQM 209
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ P+ T + K C + R+ +A ++ G E N+ Y+ +++ G T
Sbjct: 210 RIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWT 269
Query: 139 IVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDE-NINPDVVTYTS 185
A + E + V +G +++A+ + +MK+ +I D V Y
Sbjct: 270 EDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGM 329
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I G+C ++A + EM D G+ N+ +N +++ LCK G+M+E ++L M +G
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG 389
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
+RP+ + YNTL+DG+C G + +A E+ M G T +Y+ L+ G+C I+ AL
Sbjct: 390 MRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDAL 449
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
L+ ML +G+ P+ + +TL LF+ + E+A L+ E G+A + T+ T I+GL
Sbjct: 450 RLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGL 509
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
CK + EA EL ++ L+C D Y L DG
Sbjct: 510 CKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDG 543
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 192/402 (47%), Gaps = 49/402 (12%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
+++ R P S + L L K + L+L+K + GL ++ T+N +IN CK+
Sbjct: 453 FLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKI 512
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
GR++ +L R+ P+++T+ +L G C ++ A L K+ G P+V +
Sbjct: 513 GRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMF 572
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
N+ I TGH I K ++ +M ++P++VTY +
Sbjct: 573 NSFI-----TGHFIAKQ------------------WHKVNDIHSEMSARGLSPNLVTYGA 609
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I G+C + +EA L EM++ G+ PNV + +M K GK+DEA+ +L ++ I
Sbjct: 610 LIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNID 669
Query: 246 VRPN-----------AFVYNTLMD---------------GFCLTGRVNRAKELFVSMESM 279
+ P + V +T+ D G C +GR+ AK LF S+ +
Sbjct: 670 MIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNK 729
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
F+YS LI+G + I+ A SL MLS G+ P+++ YN+L L + ++ RA
Sbjct: 730 RFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRA 789
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
LF+++Q G++ + TY T ID CK EA +L + +
Sbjct: 790 VNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKM 831
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 179/386 (46%), Gaps = 24/386 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + I+ ++ + + + GL +L Y+ +++C+C MG +
Sbjct: 216 PDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRI 275
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPNVFTYNTLINGLY 133
L + R +PN VT+T L+KG C + R+ EA + +++ G + Y +ING
Sbjct: 276 LESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMING-- 333
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ G +D A + +M+D I+ ++ Y ++I G C
Sbjct: 334 ---------------------YCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKL 372
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
E + +L EM D G++P+ ++N ++D C+ G M +A + +M++ G+ Y
Sbjct: 373 GRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTY 432
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
NTL+ GFC ++ A L+ M G S S L++G K + E AL+L+ E L+
Sbjct: 433 NTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLA 492
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+G+ +V+ +NT+ L +I ++ A +L D M+ D+ TYRT DG CK +
Sbjct: 493 RGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGT 552
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
A L + L + +N I G
Sbjct: 553 ATHLMNKMEHLGFAPSVEMFNSFITG 578
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 204/453 (45%), Gaps = 75/453 (16%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+N + L K + V + + + G+ PD Y+YN LI+ +C+ G + F + ++
Sbjct: 362 YNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMV 421
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
R+ +T+ +L+KG C+ I +A L+ + G PN + +TL++GL++ G T
Sbjct: 422 RNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTE 481
Query: 140 VALNLFEE-MASG------------NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
ALNL++E +A G NG + G + +A+EL +MK+ PD +TY ++
Sbjct: 482 QALNLWKETLARGLAKNVITFNTVINGLCKI-GRMAEAEELLDRMKELRCPPDSLTYRTL 540
Query: 187 IRGFCY-----------------------------------ANDWNEAKCLLIEMMDQGV 211
G+C A W++ + EM +G+
Sbjct: 541 FDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGL 600
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
PN+VT+ ++ CK G + EA L M+ G+ PN F+ + LM F G+V+ A
Sbjct: 601 SPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANL 660
Query: 272 LFVSMESM----GCT----------HTVFS------------YSILINGYCKNKEIEGAL 305
+ + ++ GC+ H V + ++++I G CK+ I A
Sbjct: 661 VLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAK 720
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
SL+ + +K PD Y++L ++ AF L D M G+ + TY + I GL
Sbjct: 721 SLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGL 780
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
CK+ + AV LF L+ + YN LID
Sbjct: 781 CKSGKLSRAVNLFNKLQSKGISPNGITYNTLID 813
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 167/353 (47%), Gaps = 13/353 (3%)
Query: 39 LFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSC-FTPNAVTFTSLIKGL 97
+ + L GL P++ TY +L+ +CK GR+ V+ + + + V + +I G
Sbjct: 275 ILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGY 334
Query: 98 CAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE--- 154
C R+ +A + ++R G N+F YNT+INGL + G + +EM
Sbjct: 335 CQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDK 394
Query: 155 ---------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
+ EG + KA E+ M + +TY ++++GFC + ++A L
Sbjct: 395 YSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFL 454
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M+ +GV PN ++ + ++D L K GK ++A L + G+ N +NT+++G C GR
Sbjct: 455 MLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGR 514
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
+ A+EL M+ + C +Y L +GYCK ++ A L +M G P V ++N+
Sbjct: 515 MAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNS 574
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
F Q + + EM G++ + TY I G CK + EA L+
Sbjct: 575 FITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLY 627
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 174/374 (46%), Gaps = 15/374 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG-LFPDLYTYNILINCFCKMGRVSHGFV 73
P V ++ +L K+ + + K + TG + D Y ++IN +C+ GR+
Sbjct: 286 PNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATR 345
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
V + + N + ++I GLC R+ E + ++ G P+ ++YNTLI+G
Sbjct: 346 VRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYC 405
Query: 134 RTGHTIVALNLFEEMASGNGEFG--------VEGF-----VDKAKELFLQMKDENINPDV 180
R G A + M NG ++GF +D A L+ M + P+
Sbjct: 406 REGSMRKAFEMCRMMVR-NGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNE 464
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
++ ++++ G A +A L E + +G+ NV+TFN +++ LCK G+M EA LLD
Sbjct: 465 ISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDR 524
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M ++ P++ Y TL DG+C G++ A L ME +G +V ++ I G+ K+
Sbjct: 525 MKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQ 584
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
++ EM ++G+ P++V Y L + + A L+ EM +G+ + +
Sbjct: 585 WHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSA 644
Query: 361 FIDGLCKNSYIVEA 374
+ K + EA
Sbjct: 645 LMSCFYKEGKVDEA 658
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 166/375 (44%), Gaps = 24/375 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M +R PP ++ LF K T L ++ G P + +N I
Sbjct: 521 LLDRMKELR-CPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGH 579
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
+ + + +PN VT+ +LI G C E + EA L+ ++ G PNV
Sbjct: 580 FIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNV 639
Query: 123 FTYNTLINGLYRTGHTIVALNLFE-----EMASGNGEFGVEGFVDKAKELFLQMKDENIN 177
F + L++ Y+ G A + + +M G +E +DK + + D N +
Sbjct: 640 FICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIE--IDKISHVVDTIADGNPH 697
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
V + +I G C + +AK L + ++ P+ T++ ++ +G +DEA L
Sbjct: 698 SANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSL 757
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
D+M+ G+ PN YN+L+ G C +G+++RA LF ++S G + +Y+ LI+ YCK
Sbjct: 758 RDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCK 817
Query: 298 NKE----------------IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
+ +E A+ L +M+ + P+ + Y TL + +E K
Sbjct: 818 EGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISK 877
Query: 342 LFDEMQRDGVAADTW 356
L+DEM G+ W
Sbjct: 878 LYDEMHIRGLLPTNW 892
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 39/216 (18%)
Query: 55 YNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLR 114
+N++I CK GR++ + + F P+ T++SLI G A I EA +L +
Sbjct: 703 WNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVML 762
Query: 115 VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDE 174
G PN+ TYN+LI GL ++G A+NLF ++ S +
Sbjct: 763 SAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQS-----------------------K 799
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG----------------VQPNVVTF 218
I+P+ +TY ++I +C EA L +M+++G V PN +T+
Sbjct: 800 GISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITY 859
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
++ K+G M+E S+L D M G+ P ++ N
Sbjct: 860 CTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWIGN 895
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/397 (30%), Positives = 190/397 (47%), Gaps = 13/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V F L AK D+ LSL + S+ L D+ YN+ I+ F K+G+V +
Sbjct: 201 PTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKF 260
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
I + P+ VT+TS+I LC +R+ EA +F L P + YNT+I G
Sbjct: 261 FHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGS 320
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G A +L E + V G VD+A ++F +MK ++ P++ T
Sbjct: 321 AGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLST 379
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I C A + A L M G+ PNV T N+++D LCK+ K+DEA + + M
Sbjct: 380 YNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMD 439
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
P+ + +L+DG GRV+ A +++ M C Y+ LI + + E
Sbjct: 440 YKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKE 499
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
+Y +M+++ PD+ + NT +F+ + E+ +F+E++ D +Y I
Sbjct: 500 DGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILI 559
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
GL K + E ELF +++ C LD RAYN +IDG
Sbjct: 560 HGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDG 596
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 204/402 (50%), Gaps = 13/402 (3%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
+ S P V ++N + CL K D L +F+ + P+L TYNILI+ C+ G++
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDT 395
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
F + + ++ PN T ++ LC ++ EA A+F ++ C P+ T+ +LI+
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLID 455
Query: 131 GLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINP 178
GL + G A ++E+M + F G + +++ M ++N +P
Sbjct: 456 GLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSP 515
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D+ + + A + + + + E+ + P+ ++++++ L K G +E L
Sbjct: 516 DLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELF 575
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
M + G + YN ++DGFC G+VN+A +L M++ G TV +Y +I+G K
Sbjct: 576 YSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKI 635
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
++ A L+ E SK I+ +VVIY++L ++ +++ A+ + +E+ + G+ + +T+
Sbjct: 636 DRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTW 695
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +D L K I EA+ F++++ LKC + Y LI+GL
Sbjct: 696 NSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 191/437 (43%), Gaps = 47/437 (10%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
+ + P + ++NIL L + DT L + GLFP++ T NI+++ CK ++
Sbjct: 371 KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDE 430
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ + TP+ +TF SLI GL R+ +A ++ K+ C N Y +LI
Sbjct: 431 ACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIK 490
Query: 131 GLYRTGHTIVALNLFEEM--------------------ASGNGEFG-------------- 156
+ G ++++M +G E G
Sbjct: 491 NFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVP 550
Query: 157 -------------VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
GF ++ ELF MK++ D Y VI GFC N+A LL
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
EM +G +P VVT+ ++D L K ++DEA L + + N +Y++L+DGF
Sbjct: 611 EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKV 670
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
GR++ A + + G T +++++ L++ K +EI AL + M P+ V Y
Sbjct: 671 GRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTY 730
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
L L ++ + +AF + EMQ+ G+ T +Y T I GL K I EA LF +
Sbjct: 731 GILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKA 790
Query: 384 LKCELDIRAYNCLIDGL 400
D YN +I+GL
Sbjct: 791 NGGVPDSACYNAMIEGL 807
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 188/415 (45%), Gaps = 47/415 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + NI+ L K++ D ++F+ ++ PD T+ LI+ K+GRV + V
Sbjct: 410 PNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKV 469
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++L S N++ +TSLIK R + ++ + C P++ NT ++ +++
Sbjct: 470 YEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFK 529
Query: 135 TGHTIVALNLFEEMASGN-----GEFGV-------EGFVDKAKELFLQMKDENINPDVVT 182
G +FEE+ + + + GF ++ ELF MK++ D
Sbjct: 530 AGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRA 589
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK--------------- 227
Y VI GFC N+A LL EM +G +P VVT+ ++D L K
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 649
Query: 228 --------------------NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
G++DEA +L+ ++Q G+ PN + +N+L+D +N
Sbjct: 650 SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEIN 709
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A F SM+ + CT +Y ILING CK ++ A + EM +G+KP + Y T+
Sbjct: 710 EALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMI 769
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
L + + A LFD + +G D+ Y I+GL + ++A LF R
Sbjct: 770 SGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETR 824
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 172/394 (43%), Gaps = 31/394 (7%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDL-YTYNILINCFCKMG 66
L+ +P P + G L + K + + F+ P +YN L+ +
Sbjct: 59 LSFKPQP------EFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCR 112
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+LG + + F P+ T ++ G +++ E + +R F P Y
Sbjct: 113 NFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYT 172
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
TLI H+ + L LF++M E G E P V +T++
Sbjct: 173 TLIGAFSAVNHSDMMLTLFQQMQ----ELGYE-------------------PTVHLFTTL 209
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
IRGF + A LL EM + ++V +NV +D K GK+D A + + G+
Sbjct: 210 IRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGL 269
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+P+ Y +++ C R++ A E+F +E ++Y+ +I GY + + A S
Sbjct: 270 KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYS 329
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L +KG P V+ YN + L ++ +V+ A K+F+EM++D A + TY ID LC
Sbjct: 330 LLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLC 388
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + A EL +++ ++R N ++D L
Sbjct: 389 RAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRL 422
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 110/248 (44%), Gaps = 12/248 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + LAK D LF+ S + ++ Y+ LI+ F K+GR+ +++
Sbjct: 620 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ TPN T+ SL+ L I EA F ++ C PN TY LINGL +
Sbjct: 680 LEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCK 739
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
A ++EM + G + +A LF + K PD
Sbjct: 740 VRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSAC 799
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G N +A L E +G+ + T V++D L KN +++A+ + ++
Sbjct: 800 YNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLR 859
Query: 243 QIGVRPNA 250
+ G +A
Sbjct: 860 ETGKARHA 867
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 184/385 (47%), Gaps = 23/385 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N + L K++ + F + + GL PDL TYN ++N +CK G + +
Sbjct: 347 PTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWL 406
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
LG + R+ P +T+ +LI G C + EA L ++ GC P+V TY L+NG ++
Sbjct: 407 LGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHK 466
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ +A F+EM S + + PD Y + I
Sbjct: 467 VRNLPMAREFFDEMLS-----------------------KGLQPDCFAYNTRICAELILG 503
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
D ++A L MM +G+ P+ VT+NVI+D LCK G + +A L M+ G++P+ Y
Sbjct: 504 DTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYT 563
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ C G ++ A++L M S G +V +Y+ILI+ C+ + A + +ML
Sbjct: 564 CLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDV 623
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
GI+P+ + YN L L + A+ F EM G+A + +TY IDG C+ +A
Sbjct: 624 GIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADA 683
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+ L+ + D +N L G
Sbjct: 684 IRLYFEMHQNGIPPDYCTHNALFKG 708
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/376 (31%), Positives = 180/376 (47%), Gaps = 13/376 (3%)
Query: 37 LSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 96
L+ F+ + G+ PD+ N ++ R V +L+ P VT+ +L+
Sbjct: 193 LAAFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDS 252
Query: 97 LCAESRIMEAAALFTKLRVFG--CEPNVFTYNTLINGLYRTGHTIVALNLFEEM--ASGN 152
E R EA+ L ++ G C N TYN +I+ L R GH A L + M +
Sbjct: 253 FLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKA 312
Query: 153 GEFGV---------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
F GFV K + L ++M++E I P +VTY ++I G + A+
Sbjct: 313 SSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKF 372
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
EM G+ P+++T+N +++ CK G + EA LL + + G+ P YNTL+DG+C
Sbjct: 373 AEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRL 432
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
G + A+ L M GC V +Y+IL+NG K + + A + EMLSKG++PD Y
Sbjct: 433 GGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAY 492
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
NT + +AF+L + M G+ DT TY IDGLCK + +A +L +
Sbjct: 493 NTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVS 552
Query: 384 LKCELDIRAYNCLIDG 399
+ D Y CLI
Sbjct: 553 DGLQPDCITYTCLIHA 568
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 171/382 (44%), Gaps = 24/382 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N++ LA+ H + L + + +TYN LI + G V + +
Sbjct: 282 TYNVVISFLAREGHLENAAKLVDSMRLSKKASS-FTYNPLITALLERGFVQKVEALQMEM 340
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
P VT+ ++I GL ++ A F ++R G P++ TYN+++NG + G+
Sbjct: 341 ENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNL 400
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
AL L ++ + + P V+TY ++I G+C E
Sbjct: 401 KEALWLLGDL-----------------------RRAGLAPTVLTYNTLIDGYCRLGGLEE 437
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A+ L EM++QG P+V T+ ++M+ K + A D M+ G++P+ F YNT +
Sbjct: 438 ARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRIC 497
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
+ G ++A +L M G +Y+++I+G CK ++ A L +M+S G++P
Sbjct: 498 AELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQP 557
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
D + Y L E + A KL + M DG+ TY I C+ + A F
Sbjct: 558 DCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWF 617
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
R + + E + YN LI L
Sbjct: 618 RKMLDVGIEPNEITYNVLIHAL 639
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 195/394 (49%), Gaps = 13/394 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
SF++L A + L++F + G P L + N L+N + G +V G++
Sbjct: 150 SFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQM 209
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ P+ T + K C + R+ +A ++ G E N+ Y+ +++ G T
Sbjct: 210 RIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWT 269
Query: 139 IVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDE-NINPDVVTYTS 185
A + E + V +G +++A+ + +MK+ +I D V Y
Sbjct: 270 EDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGM 329
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I G+C ++A + EM D G+ N+ +N +++ LCK G+M+E ++L M +G
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG 389
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
+RP+ + YNTL+DG+C G + +A E+ M G T +Y+ L+ G+C I+ AL
Sbjct: 390 MRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDAL 449
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
L+ ML +G+ P+ + +TL LF+ + E+A L+ E G+A + T+ T I+GL
Sbjct: 450 RLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGL 509
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
CK + EA EL ++ L+C D Y L DG
Sbjct: 510 CKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDG 543
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 199/421 (47%), Gaps = 49/421 (11%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
+++ R P S + L L K + L+L+K + GL ++ T+N +IN CK+
Sbjct: 453 FLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKI 512
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
GR++ +L R+ P+++T+ +L G C ++ A L K+ G P+V +
Sbjct: 513 GRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMF 572
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
N+ I TGH I K ++ +M ++P++VTY +
Sbjct: 573 NSFI-----TGHFIAKQ------------------WHKVNDIHSEMSARGLSPNLVTYGA 609
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I G+C + +EA L EM++ G+ PNV + +M K GK+DEA+ +L ++ I
Sbjct: 610 LIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNID 669
Query: 246 VRPNAFV--------------------------YNTLMDGFCLTGRVNRAKELFVSMESM 279
+ P + +N ++ G C +GR+ AK LF S+ +
Sbjct: 670 MIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNK 729
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
F+YS LI+G + I+ A SL MLS G+ P+++ YN+L L + ++ RA
Sbjct: 730 RFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRA 789
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
LF+++Q G++ + TY T ID CK EA +L + + + + Y+ LI G
Sbjct: 790 VNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYG 849
Query: 400 L 400
L
Sbjct: 850 L 850
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 179/386 (46%), Gaps = 24/386 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + I+ ++ + + + GL +L Y+ +++C+C MG +
Sbjct: 216 PDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRI 275
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPNVFTYNTLINGLY 133
L + R +PN VT+T L+KG C + R+ EA + +++ G + Y +ING
Sbjct: 276 LESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMING-- 333
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ G +D A + +M+D I+ ++ Y ++I G C
Sbjct: 334 ---------------------YCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKL 372
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
E + +L EM D G++P+ ++N ++D C+ G M +A + +M++ G+ Y
Sbjct: 373 GRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTY 432
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
NTL+ GFC ++ A L+ M G S S L++G K + E AL+L+ E L+
Sbjct: 433 NTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLA 492
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+G+ +V+ +NT+ L +I ++ A +L D M+ D+ TYRT DG CK +
Sbjct: 493 RGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGT 552
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
A L + L + +N I G
Sbjct: 553 ATHLMNKMEHLGFAPSVEMFNSFITG 578
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 167/353 (47%), Gaps = 13/353 (3%)
Query: 39 LFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSC-FTPNAVTFTSLIKGL 97
+ + L GL P++ TY +L+ +CK GR+ V+ + + + V + +I G
Sbjct: 275 ILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGY 334
Query: 98 CAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE--- 154
C R+ +A + ++R G N+F YNT+INGL + G + +EM
Sbjct: 335 CQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDK 394
Query: 155 ---------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
+ EG + KA E+ M + +TY ++++GFC + ++A L
Sbjct: 395 YSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFL 454
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M+ +GV PN ++ + ++D L K GK ++A L + G+ N +NT+++G C GR
Sbjct: 455 MLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGR 514
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
+ A+EL M+ + C +Y L +GYCK ++ A L +M G P V ++N+
Sbjct: 515 MAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNS 574
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
F Q + + EM G++ + TY I G CK + EA L+
Sbjct: 575 FITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLY 627
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 173/392 (44%), Gaps = 39/392 (9%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M +R PP ++ LF K T L ++ G P + +N I
Sbjct: 521 LLDRMKELR-CPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGH 579
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
+ + + +PN VT+ +LI G C E + EA L+ ++ G PNV
Sbjct: 580 FIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNV 639
Query: 123 FTYNTLINGLYRTG---------HTIVALNLF-----------------EEMASGNGE-- 154
F + L++ Y+ G +V +++ + +A GN
Sbjct: 640 FICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSA 699
Query: 155 --------FGV--EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
FG+ G + AK LF ++++ PD TY+S+I G + +EA L
Sbjct: 700 NVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRD 759
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
M+ G+ PN++T+N ++ LCK+GK+ A L + + G+ PN YNTL+D +C G
Sbjct: 760 VMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEG 819
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
+ A +L M G TV +YSILI G C +E A+ L +M+ + P+ + Y
Sbjct: 820 KTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYC 879
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
TL + +E KL+DEM G+ W
Sbjct: 880 TLIHGYIKSGNMEEISKLYDEMHIRGLLPTNW 911
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 174/374 (46%), Gaps = 15/374 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG-LFPDLYTYNILINCFCKMGRVSHGFV 73
P V ++ +L K+ + + K + TG + D Y ++IN +C+ GR+
Sbjct: 286 PNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATR 345
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
V + + N + ++I GLC R+ E + ++ G P+ ++YNTLI+G
Sbjct: 346 VRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYC 405
Query: 134 RTGHTIVALNLFEEMASGNGEFG--------VEGF-----VDKAKELFLQMKDENINPDV 180
R G A + M NG ++GF +D A L+ M + P+
Sbjct: 406 REGSMRKAFEMCRMMVR-NGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNE 464
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
++ ++++ G A +A L E + +G+ NV+TFN +++ LCK G+M EA LLD
Sbjct: 465 ISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDR 524
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M ++ P++ Y TL DG+C G++ A L ME +G +V ++ I G+ K+
Sbjct: 525 MKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQ 584
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
++ EM ++G+ P++V Y L + + A L+ EM +G+ + +
Sbjct: 585 WHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSA 644
Query: 361 FIDGLCKNSYIVEA 374
+ K + EA
Sbjct: 645 LMSCFYKEGKVDEA 658
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 121/252 (48%), Gaps = 24/252 (9%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D + + P V I+FG L K+ SLF+ L + PD +TY+ LI+
Sbjct: 687 VVDTIADGNPHSANVMWNVIIFG-LCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGC 745
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
G + F + +L + TPN +T+ SLI GLC ++ A LF KL+ G PN
Sbjct: 746 AASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNG 805
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TYNTLI+ E+ EG +A +L +M +E I P V+T
Sbjct: 806 ITYNTLID-----------------------EYCKEGKTTEAFKLKQKMVEEGIQPTVIT 842
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+ +I G C EA LL +M++ V PN +T+ ++ K+G M+E S+L D M
Sbjct: 843 YSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMH 902
Query: 243 QIGVRPNAFVYN 254
G+ P ++ N
Sbjct: 903 IRGLLPTNWIGN 914
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 123/423 (29%), Positives = 186/423 (43%), Gaps = 55/423 (13%)
Query: 29 KNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 88
K + +DT + + G + TYN+LI C+ G V F + P+
Sbjct: 234 KVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGF 293
Query: 89 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM 148
T+ +LI GLC R EA AL ++ +PNV Y LI+G R G+ A + +EM
Sbjct: 294 TYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEM 353
Query: 149 ASGNGEFGVE----------------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ GV+ G +D+A L QM ++ PD +TY +I G
Sbjct: 354 VAA----GVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFR 409
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
+ +A LL EM + G+ PNV T+++++ LC++G+ ++AS LL+ M G++PNAFV
Sbjct: 410 HHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFV 469
Query: 253 YNTLMDGFCL-----------------------------------TGRVNRAKELFVSME 277
Y L+ G+C GRV + + F M+
Sbjct: 470 YAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQ 529
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
G F+YS LI+GY KN ++E A L ML G+KP+ VIY L F+ +E
Sbjct: 530 ERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIE 589
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ F M GV D Y I L + + A + + D+ Y+ LI
Sbjct: 590 KVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLI 649
Query: 398 DGL 400
GL
Sbjct: 650 SGL 652
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 189/397 (47%), Gaps = 12/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + L + + D + K + + G+ P+ TY+ L+ CKMG++ ++
Sbjct: 325 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 384
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++R P+ +T+ +I+G +A L +++ G PNV+TY+ +I+GL +
Sbjct: 385 LKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQ 444
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+G A +L EEM + + EG V A E+F +M N+ PD+
Sbjct: 445 SGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYC 504
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S+I G E+ +M ++G+ PN T++ ++ KNG ++ A +L+ M+
Sbjct: 505 YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 564
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G++PN +Y L++ + + + + F SM G Y ILI+ + +E
Sbjct: 565 DTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNME 624
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A + + G PDV +Y++L L + E+AF + DEM + GV + Y I
Sbjct: 625 AAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALI 684
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
DGLCK+ I A +F ++ + Y LIDG
Sbjct: 685 DGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDG 721
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 185/397 (46%), Gaps = 13/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N++ ++ L + + G+ P++YTY+I+I+ C+ G +
Sbjct: 395 PDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDL 454
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + PNA + LI G C E + A +F K+ P+++ YN+LI GL +
Sbjct: 455 LEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSK 514
Query: 135 TGHTIVALNLFEEMASGN---GEFGVEGFV---------DKAKELFLQMKDENINPDVVT 182
G + F +M EF G + + A++L +M D + P+ V
Sbjct: 515 VGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVI 574
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++ + ++D + M+DQGV + + +++ L +G M+ A R+L +
Sbjct: 575 YIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIE 634
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G P+ VY++L+ G C T +A + M G + Y+ LI+G CK+ +I
Sbjct: 635 KNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDIS 694
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A +++ +L+KG+ P+ V Y +L ++ + AF L++EM G+ D + Y
Sbjct: 695 YARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLT 754
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G + +A+ L + L+ I ++N L+DG
Sbjct: 755 TGCSSAGDLEQAMFLIEEM-FLRGHASISSFNNLVDG 790
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 145/309 (46%), Gaps = 23/309 (7%)
Query: 92 SLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG 151
S ++ C A + ++R GC N TYN LI GL R+G
Sbjct: 227 SALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSG--------------- 271
Query: 152 NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
V++A M+D + PD TY ++I G C + NEAK LL EM +
Sbjct: 272 --------AVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAEL 323
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
+PNVV + ++D + G DEA +++ M+ GV+PN Y+ L+ G C G+++RA
Sbjct: 324 KPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASL 383
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
L M +Y+++I G+ ++ + A L EM + GI P+V Y+ + L
Sbjct: 384 LLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLC 443
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIR 391
+ + E+A L +EM G+ + + Y I G C+ + A E+F + + D+
Sbjct: 444 QSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLY 503
Query: 392 AYNCLIDGL 400
YN LI GL
Sbjct: 504 CYNSLIFGL 512
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 165/373 (44%), Gaps = 46/373 (12%)
Query: 29 KNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 88
K+ + V S FK + G+ D Y ILI+ G + F VL I ++ P+
Sbjct: 584 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVH 643
Query: 89 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM 148
++SLI GLC + +A + ++ G +PN+ YN LI+GL ++G A N+F +
Sbjct: 644 VYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI 703
Query: 149 ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD 208
+ +G V P+ VTYTS+I G C D + A L EM+
Sbjct: 704 LA-------KGLV----------------PNCVTYTSLIDGSCKVGDISNAFYLYNEMLA 740
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
G+ P+ ++V+ G +++A L++ M G + +N L+DGFC G++
Sbjct: 741 TGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQE 799
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
+L + G + +I+G + ++ +++ E+ K + +++LF+
Sbjct: 800 TLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFM 859
Query: 329 VLFEIHQVERAFKLFDEMQRDG---------------VAADTW-----TYRTFIDGLCKN 368
+ I+Q + + D+M RD + A + +Y +D LC+
Sbjct: 860 DM--INQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRK 917
Query: 369 SYIVEAVELFRTL 381
+ EA+ L + +
Sbjct: 918 GKLSEALNLLKEM 930
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 126/298 (42%), Gaps = 31/298 (10%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
S P V ++ L L K + + ++ G+ P++ YN LI+ CK G +S+
Sbjct: 638 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 697
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
V IL PN VT+TSLI G C I A L+ ++ G P+ F Y+ L G
Sbjct: 698 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGC 757
Query: 133 YRTGHTIVALNLFEEM-ASGNGEFG-----VEGFVDKAK-----ELFLQMKDENINPDVV 181
G A+ L EEM G+ V+GF + K +L + + P+ +
Sbjct: 758 SSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNAL 817
Query: 182 TYTSVIRGFCYANDWNEAKCLLIE-------------------MMDQGVQPNVVTFNVIM 222
T ++I G A +E + +E M++QG P V ++I
Sbjct: 818 TIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIR 877
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
D CK G +D+A L D+++ Y ++D C G+++ A L M+ G
Sbjct: 878 DH-CKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 934
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 72/182 (39%), Gaps = 35/182 (19%)
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE---------- 302
+ + ++ +C + AK++ V M GC +Y++LI G C++ +E
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284
Query: 303 -----------GAL--------------SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
GAL +L EM +KP+VV+Y L +
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
AFK+ EM GV + TY + GLCK + A L + + D YN +I
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404
Query: 398 DG 399
+G
Sbjct: 405 EG 406
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 191/402 (47%), Gaps = 22/402 (5%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR---VSHGFVVLGR 77
N++ + + D + L ++L S G PD+ +YN ++ C R V V + R
Sbjct: 182 NLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVR 241
Query: 78 ILRSCF-------TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ + TP+ + ++I G+C + A + +++ +G +PNV YNT++
Sbjct: 242 VHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLK 301
Query: 131 GLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINP 178
GL A +L EM + F G VD+ EL QM + P
Sbjct: 302 GLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIP 361
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
DV+TYT+VI GFC +EA LL M G +PN +++ +++ LC+ + +A L+
Sbjct: 362 DVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELI 421
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
MIQ G PN +NTL++ C G +A EL M GC+ + SYS +I+G K
Sbjct: 422 SHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 481
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+ E AL L M++KGI P+ +IY+++ L + ++ ++FD +Q V +D Y
Sbjct: 482 GKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALY 541
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I LCK A++ F + C + Y LI GL
Sbjct: 542 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGL 583
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 185/377 (49%), Gaps = 35/377 (9%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
PP+C + C + + + + + L++ G D N++++ C+ G V G +
Sbjct: 143 PPMCHVILEAAC--RGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVEL 200
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL----------FTKLRVFGCEPNVFT 124
L ++ P+ V++ +++KGLC R + L +++ GC P++
Sbjct: 201 LRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRM 260
Query: 125 YNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
Y T+I+G+ + GH VA ++ M S +G + P+VV Y
Sbjct: 261 YATIIDGICKDGHHEVANDILSRMPS----YG-------------------LKPNVVCYN 297
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+V++G C A W EA+ LL EM + + VTFN+++D C+NG +D LL+ M++
Sbjct: 298 TVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEH 357
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G P+ Y T+++GFC G V+ A L +M + GC SY+I++ G C+ + A
Sbjct: 358 GCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDA 417
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L M+ +G P+ V +NTL + + E+A +L +M +G + D +Y T IDG
Sbjct: 418 QELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDG 477
Query: 365 LCKNSYIVEAVELFRTL 381
L K EA+EL +
Sbjct: 478 LGKAGKTEEALELLNVM 494
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 173/390 (44%), Gaps = 24/390 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSL----------FKRLNSTGLFPDLYTYNILINCFCK 64
P + S+N + L K +D V L ++ G PDL Y +I+ CK
Sbjct: 211 PDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICK 270
Query: 65 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFT 124
G +L R+ PN V + +++KGLC+ R EA L ++ C + T
Sbjct: 271 DGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVT 330
Query: 125 YNTLINGLYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQM 171
+N L++ + G + L E+M NG F EG VD+A L M
Sbjct: 331 FNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVING-FCKEGLVDEAVMLLKNM 389
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
P+ ++YT V++G C A W +A+ L+ M+ QG PN VTFN +++ +CK G
Sbjct: 390 SACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLA 449
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
++A LL M+ G P+ Y+T++DG G+ A EL M + G T YS +
Sbjct: 450 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSM 509
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
+ + + + ++ + ++ D +YN + L + + +RA F M +G
Sbjct: 510 ASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGC 569
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+ TY I GL + EA +L L
Sbjct: 570 MPNESTYTILIRGLASEGLVREAQDLLSEL 599
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 188/417 (45%), Gaps = 60/417 (14%)
Query: 41 KRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 100
+ L++ G + YN +I +C+ G+V+ + + PNA T+ +++ LCA
Sbjct: 65 RALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP---VPPNAYTYFPIVRSLCAR 121
Query: 101 SRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG---HTIVALNLFEE----MASGNG 153
I +A + ++ + GC + ++ R G + AL + + SGN
Sbjct: 122 GLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNC 181
Query: 154 EFGV-----EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM- 207
V +G VD+ EL ++ PD+V+Y +V++G C A W++ + L++EM+
Sbjct: 182 NLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVR 241
Query: 208 ---------DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
+ G P++ + I+D +CK+G + A+ +L M G++PN YNT++
Sbjct: 242 VHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLK 301
Query: 259 G-----------------------------------FCLTGRVNRAKELFVSMESMGCTH 283
G FC G V+R EL M GC
Sbjct: 302 GLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIP 361
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
V +Y+ +ING+CK ++ A+ L M + G KP+ + Y + L + A +L
Sbjct: 362 DVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELI 421
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
M + G + T+ T I+ +CK +A+EL + + + C D+ +Y+ +IDGL
Sbjct: 422 SHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGL 478
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 145/296 (48%), Gaps = 23/296 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+FNIL +N D V+ L +++ G PD+ TY +IN FCK G V ++L +
Sbjct: 330 TFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNM 389
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PN +++T ++KGLC R ++A L + + GC PN T+NTLIN + +
Sbjct: 390 SACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCK---- 445
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+G ++A EL QM +PD+++Y++VI G A E
Sbjct: 446 -------------------KGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 486
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A LL M+++G+ PN + ++ + L + G+ D+ ++ D + VR +A +YN ++
Sbjct: 487 ALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVIS 546
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
C +RA + F M S GC +Y+ILI G + A L E+ S+
Sbjct: 547 SLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSR 602
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 132/355 (37%), Gaps = 74/355 (20%)
Query: 90 FTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
++LI+ LCA R +AA L G V YN +I G R G A L +
Sbjct: 47 LSALIRSLCAAGRTADAA---RALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP 103
Query: 150 SGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
+ P+ TY ++R C +A +L EM +
Sbjct: 104 --------------------------VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLR 137
Query: 210 GVQPNVVTFNVIMDELCKNGK-----------------------------------MDEA 234
G +VI++ C+ G +DE
Sbjct: 138 GCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEG 197
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV----------SMESMGCTHT 284
LL + G P+ YN ++ G C+ R + +EL V M GCT
Sbjct: 198 VELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPD 257
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
+ Y+ +I+G CK+ E A + M S G+KP+VV YNT+ L + E A L
Sbjct: 258 LRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLA 317
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
EM ++ D T+ +D C+N + +EL + C D+ Y +I+G
Sbjct: 318 EMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVING 372
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 75/183 (40%), Gaps = 6/183 (3%)
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
+ ++ LC G+ +A+R LD G YN ++ G+C G+V A+ L ++
Sbjct: 47 LSALIRSLCAAGRTADAARALD---TAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP 103
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
++Y ++ C I AL++ EM +G + + +
Sbjct: 104 ---VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFR 160
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
A + + G D+ + +C+ + E VEL R L CE DI +YN ++
Sbjct: 161 SAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVL 220
Query: 398 DGL 400
GL
Sbjct: 221 KGL 223
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 36/183 (19%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ +M+ P PV +FN L + K + + L K++ G PDL +Y+ +I+
Sbjct: 420 LISHMIQQGCLPNPV-TFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGL 478
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR---------------IMEAA 107
K G+ +L ++ TPN + ++S+ L E R + A
Sbjct: 479 GKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDA 538
Query: 108 ALFTKL-----------RVF---------GCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
AL+ + R GC PN TY LI GL G A +L E
Sbjct: 539 ALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSE 598
Query: 148 MAS 150
+ S
Sbjct: 599 LCS 601
>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
Length = 535
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 186/381 (48%), Gaps = 14/381 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ + L K +YD L ++++ ++ P L TY +L++ CK +V V
Sbjct: 104 PDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDV 163
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++R P+ + ++SLI GL R+ EA L + G P Y +++ GL +
Sbjct: 164 FEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCK 223
Query: 135 TGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKDENINPDVVT 182
G A+ +EM V+ G V++A + +M D + PD ++
Sbjct: 224 CGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTIS 283
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT I EA+ + M+++G +P++ T+ +I+D CK G M A+ +L LM
Sbjct: 284 YTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMD 343
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ V+PN ++Y +MDGF + R+ A EL+ + G + +Y+ +IN CK K+++
Sbjct: 344 KAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMD 403
Query: 303 GALSLYGEMLSKG--IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
AL L EM + ++P +V Y+ + L ++ ERAF L EM +GV D +TY +
Sbjct: 404 EALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTS 463
Query: 361 FIDGLCKNSYIVEAVELFRTL 381
I L + A+EL +
Sbjct: 464 LIQTLAGAGKVSRAMELLEEM 484
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 189/409 (46%), Gaps = 21/409 (5%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
S P V SFNIL A ++ V +L + + + G+ + T+ ++++ C +
Sbjct: 25 SEPNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAV 84
Query: 73 VVLG-------RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
R+ + P++VT+T+++ GL + K+ CEP + TY
Sbjct: 85 SYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTY 144
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKD 173
L++GL + A ++FEEM + + G VD+A++L M
Sbjct: 145 TVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIA 204
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
P V YTS++ G C EA + EM + ++P V T++ I+ GK++E
Sbjct: 205 RGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEE 264
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A +++ M P+ Y ++ GR A+++F +M GC + +Y I+I+
Sbjct: 265 AFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIID 324
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
+CK + A + M +KP+ IY + + ++E A +L+ + +DG+
Sbjct: 325 NFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILP 384
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD--IRAYNCLIDGL 400
T TY T I+ LCK + EA+EL R ++ K EL+ I Y+ +I GL
Sbjct: 385 STVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGL 433
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 160/360 (44%), Gaps = 27/360 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M+ P PP ++ + L K + + + L P + TY+ ++ +
Sbjct: 198 LVDLMIARGP-PPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGY 256
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
MG+V F V+ + P+ +++T I+ L + R EA +F + GC+P++
Sbjct: 257 IGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDM 316
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TY +I+ + G A ++ M DKA + P+
Sbjct: 317 HTYGIIIDNFCKEGSMAAATHVLRLM-------------DKAA----------VKPNRYI 353
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT ++ GF ++ EA L ++ G+ P+ VT+N +++ LCK KMDEA LL M
Sbjct: 354 YTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQ 413
Query: 243 QIG--VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+ + P+ Y+ ++ G G RA +L M G F+Y+ LI +
Sbjct: 414 RRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGK 473
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ A+ L EML GI PD Y TL +L V+ A+ L EM R+G + +T++
Sbjct: 474 VSRAMELLEEMLKAGIFPDDHTYGTLVQILCR-SDVDAAWDLLQEMMRNGHTPNEFTFKA 532
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 131/288 (45%), Gaps = 23/288 (7%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F + + M + R P S+ + L + +F+ + G PD++TY I+I+
Sbjct: 266 FAVMEEMAD-RDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIID 324
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
FCK G ++ VL + ++ PN +T ++ G SR+ EA L+ ++ G P
Sbjct: 325 NFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILP 384
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
+ TYNT+IN L + AL L EM Q + E + P +
Sbjct: 385 STVTYNTVINALCKLKKMDEALELLREM---------------------QRRKEELEPSI 423
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY+ +I G A LL EM+D GV P+ T+ ++ L GK+ A LL+
Sbjct: 424 VTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEE 483
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
M++ G+ P+ Y TL+ C + V+ A +L M G T F++
Sbjct: 484 MLKAGIFPDDHTYGTLVQILCRSD-VDAAWDLLQEMMRNGHTPNEFTF 530
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 179/376 (47%), Gaps = 13/376 (3%)
Query: 38 SLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 97
++F + G+ PD ++ +++ C MGRV L ++ F + T T +I
Sbjct: 210 NMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAF 269
Query: 98 CAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV 157
C + + F K+ G PNV + LINGL + G A L EEM + V
Sbjct: 270 CQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNV 329
Query: 158 ------------EGFVDKAKELFLQM-KDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
+G+ +KA LFL++ + + P+V TYT++I G+C + N A+ LL
Sbjct: 330 YTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLS 389
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
M +QG+ PN T+ ++D CK G A L+DLM + G PN + YN ++DG C G
Sbjct: 390 RMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKG 449
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
++ A L + G +Y+IL++ +C+ + +L + +ML G PD+ Y
Sbjct: 450 SLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYT 509
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
TL Q++ + +LF+E G+ TY + I G C+ AV+LF+ +
Sbjct: 510 TLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNH 569
Query: 385 KCELDIRAYNCLIDGL 400
C D Y LI GL
Sbjct: 570 GCAPDSITYGALISGL 585
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 177/348 (50%), Gaps = 13/348 (3%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G D T ++I+ FC+ G V+ +++ PN + FT+LI GLC + I +A
Sbjct: 254 GFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQA 313
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG------------- 153
L ++ G +PNV+T+ TLI+GL + G T A LF ++ +G
Sbjct: 314 FELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMIN 373
Query: 154 EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
+ E +++A+ L +M+++ + P+ TYT++I G C ++ A L+ M +G P
Sbjct: 374 GYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSP 433
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
N+ T+N I+D LCK G +DEA RLL+ + G++ + Y LM C NR+ F
Sbjct: 434 NIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFF 493
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
M +G T + SY+ LI+ +C+ K+++ + L+ E +S G+ P Y ++
Sbjct: 494 NKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRY 553
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
A KLF M G A D+ TY I GLCK S + +A L+ +
Sbjct: 554 GNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAM 601
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 173/382 (45%), Gaps = 20/382 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +F L L K L + + G P++YT+ LI+ CK G F +
Sbjct: 292 PNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRL 351
Query: 75 LGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+++RS + PN T+T++I G C E ++ A L ++++ G PN TY TLI+G
Sbjct: 352 FLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHC 411
Query: 134 RTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVV 181
+ G+ + A L + M + +G +D+A L ++ + D V
Sbjct: 412 KVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGV 471
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT ++ C D N + +M+ G P++ ++ ++ C+ +M E+ RL +
Sbjct: 472 TYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEA 531
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ +G+ P Y +++ G+C G + A +LF M + GC +Y LI+G CK ++
Sbjct: 532 VSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKL 591
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW--TYR 359
+ A +LY M+ KG+ P V TL + A + D +++ W T
Sbjct: 592 DDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEK-----RQWIRTVN 646
Query: 360 TFIDGLCKNSYIVEAVELFRTL 381
T + LC + A F L
Sbjct: 647 TLVRKLCSEGKLDMAALFFHKL 668
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 122/243 (50%), Gaps = 1/243 (0%)
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
G V+ A+ +F++M ++PD V++ ++ C EA+ L M+++G + T
Sbjct: 203 GLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATC 262
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
+I+D C+ G ++ M+++G+ PN + L++G C G + +A EL M
Sbjct: 263 TLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVR 322
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEML-SKGIKPDVVIYNTLFVVLFEIHQVE 337
G V++++ LI+G CK E A L+ +++ S G KP+V Y + + ++
Sbjct: 323 RGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLN 382
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
RA L MQ G+ +T TY T IDG CK V A EL + +I YN +I
Sbjct: 383 RAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAII 442
Query: 398 DGL 400
DGL
Sbjct: 443 DGL 445
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 108/215 (50%), Gaps = 1/215 (0%)
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
++ F EA +++EM +QG+ P+ T N ++D G ++ A + M Q G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
V P+ + ++ C GRV A+ +M G + +++I+ +C+ + +
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
+ +M+ G+ P+V+ + L L + +++AF+L +EM R G + +T+ T IDGL
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339
Query: 366 CKNSYIVEAVELF-RTLRILKCELDIRAYNCLIDG 399
CK + +A LF + +R + ++ Y +I+G
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMING 374
>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 201/396 (50%), Gaps = 22/396 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNIL-FGCL--AKNKHYDTVLS-LFKRLNSTGLFPDLYTYNIL 58
+FD M ++R P SF ++ GC K + D LS + +R G PD T ++
Sbjct: 227 VFDEM-SVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQR----GFIPDNATCTLI 281
Query: 59 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC 118
++ C+ G V+ +++ F PN + FTSLI GLC + I +A + ++ G
Sbjct: 282 LSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGW 341
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN-------------GEFGVEGFVDKAK 165
+PNV+T+ LI+GL + G T A LF ++ + G + E +++A+
Sbjct: 342 KPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAE 401
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
LF +MK++ + P+V TYT++I G C A +++ A L+ M D+G +PN+ T+N ++D L
Sbjct: 402 MLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSL 461
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
CK + EA LL+ G+ + Y L+ C + +A F M G +
Sbjct: 462 CKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADM 521
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
+ILI +C+ K+++ + L+ ++S G+ P Y ++ + + A K F
Sbjct: 522 RLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHN 581
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
M+R G D++TY + I GLCK S + EA +L+ +
Sbjct: 582 MKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 617
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 192/408 (47%), Gaps = 16/408 (3%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNIL-INCFCKM 65
M N SP + + N + ++ D ++F ++ G+ PD ++ ++ I CF +
Sbjct: 196 MQNQGLSPSSI-TMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCF-RD 253
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
G++ L +++ F P+ T T ++ LC + A F K+ G +PN+ +
Sbjct: 254 GKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINF 313
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKD 173
+LI+GL + G A + EEM + V G+ +KA LFL++
Sbjct: 314 TSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVR 373
Query: 174 ENI-NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 232
+I P+V TYTS+I G+C + N A+ L M +QG+ PNV T+ +++ CK G D
Sbjct: 374 SDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFD 433
Query: 233 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
A L++LM G RPN + YN ++D C R A EL S G +Y+ILI
Sbjct: 434 RAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILI 493
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
CK +I+ AL+ + M G + D+ + N L +++ + +LF + G+
Sbjct: 494 QEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLV 553
Query: 353 ADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY + I G CK A++ F ++ C D Y LI GL
Sbjct: 554 PTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGL 601
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 143/310 (46%), Gaps = 13/310 (4%)
Query: 102 RIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA-----SGNGEFG 156
R+ EA + ++ G P+ T N ++ +G A N+F+EM+ + F
Sbjct: 185 RLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFK 244
Query: 157 V-------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
+ +G + +A M PD T T ++ C N A +M+D
Sbjct: 245 LMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDL 304
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
G +PN++ F ++D LCK G + +A +L+ M++ G +PN + + L+DG C G +A
Sbjct: 305 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKA 364
Query: 270 KELFVSM-ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
LF+ + S V +Y+ +I GYCK ++ A L+ M +G+ P+V Y TL
Sbjct: 365 FRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 424
Query: 329 VLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
+ +RA++L + M +G + +TY ID LCK S EA EL E
Sbjct: 425 GHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEA 484
Query: 389 DIRAYNCLID 398
D Y LI
Sbjct: 485 DGVTYTILIQ 494
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 116/217 (53%), Gaps = 5/217 (2%)
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
++R F NEA ++++M +QG+ P+ +T N +++ ++G +D A + D M G
Sbjct: 176 MLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRG 235
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
V P++ + ++ G G++ A M G + +++++ C+N + A+
Sbjct: 236 VCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAI 295
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
+ +M+ G KP+++ + +L L + +++AF++ +EM R+G + +T+ IDGL
Sbjct: 296 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 355
Query: 366 CKNSYIVEAVELFRTLRILKCEL---DIRAYNCLIDG 399
CK + +A LF L++++ ++ ++ Y +I G
Sbjct: 356 CKRGWTEKAFRLF--LKLVRSDIYKPNVHTYTSMIGG 390
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 81/181 (44%), Gaps = 15/181 (8%)
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
V D L NG + +A ++ M++ F GR+N A + + M++
Sbjct: 155 VTADSLIANGNLQKAHEVMRCMLR---------------NFSEIGRLNEAVGMVMDMQNQ 199
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G + + + + ++ ++ I+ A +++ EM +G+ PD + + + F +++ A
Sbjct: 200 GLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEA 259
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ M + G D T + LC+N + A+ FR + L + ++ + LIDG
Sbjct: 260 DRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDG 319
Query: 400 L 400
L
Sbjct: 320 L 320
>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Glycine max]
Length = 682
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 123/412 (29%), Positives = 210/412 (50%), Gaps = 22/412 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGL-FPDLYTYNILINC 61
+FD M P VC +N++ K + +++RL L FP + +YN++I+
Sbjct: 205 VFDEMRERGVEPDVVC-YNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISG 263
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK GR S G + R+ ++ + T+++LI GL + A ++ ++ G P+
Sbjct: 264 LCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPD 323
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFL 169
V T N ++NGL + G+ L+EEM + G F G VD A L+
Sbjct: 324 VVTCNAMLNGLCKAGNVEECFELWEEMGKCSLRNVRSYNIFLKGLFE-NGKVDDAMMLW- 381
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL--IEMMDQGVQPNVVTFNVIMDELCK 227
D + D TY V+ G C+ N A +L E + G+ + ++ +++ LCK
Sbjct: 382 ---DGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCK 438
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
G++DEA +++LM + G + N+ V N L+DGF +++ A ++F M GC+ TV S
Sbjct: 439 EGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVS 498
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y+ILING + + A EML KG KPD++ Y+TL L+E + ++ A +L+ +
Sbjct: 499 YNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFL 558
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G D Y I LC + + +A++L+ TLR KC +++ +N +++G
Sbjct: 559 DTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKC-VNLVTHNTIMEG 609
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 199/413 (48%), Gaps = 20/413 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M ++ P + SFN L ++ + + FK + + P++ TYN+L+
Sbjct: 99 VFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEAARVSPNVETYNVLMKVM 158
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G G +L + + +P+ +T+ +LI G+ + A +F ++R G EP+V
Sbjct: 159 CKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDV 218
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE-------------GFVDKAKELFL 169
YN +I+G ++ G + A ++E + F G + E++
Sbjct: 219 VCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWE 278
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+MK D+ TY+++I G A D A+ + EM+ +GV+P+VVT N +++ LCK G
Sbjct: 279 RMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAG 338
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
++E L + M + +R N YN + G G+V+ A L+ + +Y
Sbjct: 339 NVEECFELWEEMGKCSLR-NVRSYNIFLKGLFENGKVDDAMMLWDGLLEADSA----TYG 393
Query: 290 ILINGYCKNKEIEGALSLYGEMLSK--GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
++++G C N + AL + E + G+ D Y++L L + +++ A + + M
Sbjct: 394 VVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMN 453
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ G ++ IDG K+S + AV++FR + C L + +YN LI+GL
Sbjct: 454 KRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGL 506
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 148/325 (45%), Gaps = 21/325 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVL- 75
V S+NI L +N D + L+ L L D TY ++++ C G V+ VL
Sbjct: 358 VRSYNIFLKGLFENGKVDDAMMLWDGL----LEADSATYGVVVHGLCWNGYVNRALQVLE 413
Query: 76 -GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ ++SLI LC E R+ EA + + GC+ N N LI+G +
Sbjct: 414 EAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVK 473
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
A+ +F EM+ NG E F + A + +M ++ PD++
Sbjct: 474 HSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFRE-AYDCVNEMLEKGWKPDII 532
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY+++I G +N + A L + +D G +P+++ +N+++ LC +GK+++A +L +
Sbjct: 533 TYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTL 592
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
Q N +NT+M+GF G A +++ + + SY+I + G C +
Sbjct: 593 RQKKC-VNLVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRV 651
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTL 326
A+ + L +G P + +N L
Sbjct: 652 TDAVGFLDDALVRGFLPTAITWNIL 676
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 108/260 (41%), Gaps = 13/260 (5%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G+ D + Y+ LIN CK GR+ V+ + + N+ LI G S++ A
Sbjct: 421 GMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSA 480
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GE 154
+F ++ GC V +YN LINGL R A + EM G
Sbjct: 481 VKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGG 540
Query: 155 FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
+D A L+ Q D PD++ Y VI C + +A L + Q N
Sbjct: 541 LYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDA-LQLYSTLRQKKCVN 599
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
+VT N IM+ K G + AS++ +++ ++P+ YN + G C GRV A
Sbjct: 600 LVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLD 659
Query: 275 SMESMGCTHTVFSYSILING 294
G T +++IL+
Sbjct: 660 DALVRGFLPTAITWNILVRA 679
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 114/238 (47%), Gaps = 26/238 (10%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
N+L K+ D+ + +F+ ++ G + +YNILIN + R + + +L
Sbjct: 465 NVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLE 524
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAA-ALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+ P+ +T+++LI GL ES +M+AA L+ + G +P++ YN +I+ L +G
Sbjct: 525 KGWKPDIITYSTLIGGL-YESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVE 583
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
AL L+ + Q K N+ VT+ +++ GF + A
Sbjct: 584 DALQLYSTLR--------------------QKKCVNL----VTHNTIMEGFYKVGNCEMA 619
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
+ +++ +QP+++++N+ + LC G++ +A LD + G P A +N L+
Sbjct: 620 SKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTAITWNILV 677
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 60/152 (39%), Gaps = 34/152 (22%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS----- 69
P + +++ L G L ++ D L L+ + TG PD+ YNI+I+ C G+V
Sbjct: 529 PDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQL 588
Query: 70 -------------------HGFVVLG----------RILRSCFTPNAVTFTSLIKGLCAE 100
GF +G IL P+ +++ +KGLC+
Sbjct: 589 YSTLRQKKCVNLVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSC 648
Query: 101 SRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
R+ +A V G P T+N L+ +
Sbjct: 649 GRVTDAVGFLDDALVRGFLPTAITWNILVRAV 680
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 188/376 (50%), Gaps = 16/376 (4%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
N L L ++++++ S ++++ T F + + + L+ CF +M + VL +L+
Sbjct: 76 NNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLK 135
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
F N + L+KGLC +A +L ++R P+V +YNT+I G
Sbjct: 136 RGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEK 195
Query: 141 ALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
AL L EM G+G F G +D+A L +MK + + D++ YTS+I
Sbjct: 196 ALQLANEM-QGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLI 254
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
RGFC + + K L E++++G P +T+N ++ CK G++ EAS + + M++ GVR
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVR 314
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
PN + Y L+DG C G+ A +L M V +Y+I+IN CK+ + AL +
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEI 374
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG--VAADTWTYRTFIDGL 365
M + +PD + YN+L L ++ A KL M +D D ++ I GL
Sbjct: 375 VELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGL 434
Query: 366 CKNSYIVEAVELFRTL 381
CK + + +A++++ L
Sbjct: 435 CKGNRLHQALDIYDLL 450
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 185/388 (47%), Gaps = 25/388 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+N + + K + L L + +G L T+ ILI+ FCK G++ +
Sbjct: 175 PDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGL 234
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + + +TSLI+G C + ALF ++ G P TYNTLI G +
Sbjct: 235 LKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G + +A E+F M + + P+V TYT +I G C
Sbjct: 295 LGR-----------------------LKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVG 331
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EA LL M+ + +PNVVT+N+I+++LCK+ + +A +++LM + RP+ YN
Sbjct: 332 KTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYN 391
Query: 255 TLMDGFCLTGRVNRAKELFVSM--ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
+L+ G C G ++ A +L M +S V S++ LI+G CK + AL +Y ++
Sbjct: 392 SLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLV 451
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
K D+V N L + V +A +L+ ++ + ++ TY T IDG CK +
Sbjct: 452 EKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLN 511
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
A L +R+ + + YNCL+ L
Sbjct: 512 VAKGLLCKMRLSELPPSVFDYNCLLSSL 539
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 184/394 (46%), Gaps = 14/394 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ IL K D + L K + GL DL Y LI FC G + G + +
Sbjct: 214 TWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEV 273
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
L +P A+T+ +LI+G C R+ EA+ +F + G PNV+TY LI+GL G T
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKT 333
Query: 139 IVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSV 186
AL L M + E V + V A E+ MK PD +TY S+
Sbjct: 334 KEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSL 393
Query: 187 IRGFCYANDWNEAKCLLIEMMDQG--VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+ G C D +EA LL M+ P+V++FN ++ LCK ++ +A + DL+++
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEK 453
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
+ N L++ +G VN+A EL+ + + +Y+ +I+G+CK + A
Sbjct: 454 LGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVA 513
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L +M + P V YN L L + +++A++LF+EMQRD D ++ IDG
Sbjct: 514 KGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDG 573
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
K I A L + D+ Y+ LI+
Sbjct: 574 SLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLIN 607
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 194/395 (49%), Gaps = 17/395 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF++M+ R P V ++ L L L L + P++ TYNI+IN
Sbjct: 304 IFEFMME-RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKL 362
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFG-CEP 120
CK V+ ++ + + P+ +T+ SL+ GLCA+ + EA+ L + L+ +P
Sbjct: 363 CKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDP 422
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELF 168
+V ++N LI+GL + AL++++ + G + G V+KA EL+
Sbjct: 423 DVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELW 482
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
Q+ + I P+ TYT++I GFC N AK LL +M + P+V +N ++ LCK
Sbjct: 483 KQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKK 542
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G +D+A RL + M + P+ +N ++DG G + A+ L V M G + +F+Y
Sbjct: 543 GTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTY 602
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
S LIN + K ++ A+S + +M+ G +PD I +++ + ++ + ++
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVD 662
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
V D T +D +C +S ++ + R LR+
Sbjct: 663 KDVVLDKELTCTVMDYMCSSSGNMDIAK--RLLRV 695
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 116/220 (52%)
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
V+ + ++ F A +L M+ +G NV +N+++ LC+N + +A LL
Sbjct: 108 VSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLRE 167
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M Q + P+ YNT++ GFC + +A +L M+ GC+ ++ ++ ILI+ +CK +
Sbjct: 168 MRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGK 227
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
++ A+ L EM KG++ D+++Y +L + +++R LFDE+ G + TY T
Sbjct: 228 MDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I G CK + EA E+F + ++ Y LIDGL
Sbjct: 288 LIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGL 327
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%)
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
F+ + L+ +++ E A S Y +ML + V + L ++ + A +
Sbjct: 73 FAGNNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLAL 132
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
M + G A + + Y + GLC+N +AV L R +R D+ +YN +I G
Sbjct: 133 MLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRG 186
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 171/324 (52%), Gaps = 25/324 (7%)
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ L CF+ + +F ++ C ES + +A L ++R G +P+V TYN LING+ +
Sbjct: 74 QTLFPCFSLSGFSF--YVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICK-- 129
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
EG +D+A + M P+V+T+ ++R C W
Sbjct: 130 ---------------------EGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRW 168
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+A+ LL +M+ +G P+VVTFN++++ LC+ G + A +L+ M G PN+ YN L
Sbjct: 169 MDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPL 228
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ GFC +++RA E M S GC + +Y+ L+ CK+ +++ A+ + ++ SKG
Sbjct: 229 LHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGC 288
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
P ++ YNT+ L ++ + ERA KL DEM+R G+ D TY + + GL + + EA++
Sbjct: 289 SPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIK 348
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
F L L + YN ++ GL
Sbjct: 349 FFHDLEGLGIRPNAITYNSIMLGL 372
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 171/360 (47%), Gaps = 25/360 (6%)
Query: 43 LNSTGLFP--DLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 100
+N LFP L ++ + CK V +L + P+ VT+ LI G+C E
Sbjct: 71 INQQTLFPCFSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKE 130
Query: 101 SRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF 160
R+ EA + +GC+PNV T+N ++ + TG +
Sbjct: 131 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWM--------------------- 169
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
A++L M + +P VVT+ +I C A +L +M G PN +++N
Sbjct: 170 --DAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNP 227
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
++ CK KMD A LD+M+ G P+ YNTL+ C G+V+ A E+ + S G
Sbjct: 228 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG 287
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
C+ + +Y+ +I+G K + E A+ L EM KG+KPD++ Y++L L +V+ A
Sbjct: 288 CSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAI 347
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
K F +++ G+ + TY + + GLCK+ A++ + +C+ Y LI+G+
Sbjct: 348 KFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGI 407
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 161/326 (49%), Gaps = 13/326 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M N + S P V ++N+L + K D + + S G P++ T+NI++
Sbjct: 104 LLDEMRN-KGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSM 162
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C GR +L +LR +P+ VTF LI LC + + A + K+ + GC PN
Sbjct: 163 CSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNS 222
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
+YN L++G + A+ + M S + +G VD A E+ Q
Sbjct: 223 LSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 282
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ + +P ++TY +VI G A LL EM +G++P+++T++ ++ L + GK
Sbjct: 283 LSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGK 342
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+DEA + + +G+RPNA YN++M G C + + +RA + M S C T +Y+I
Sbjct: 343 VDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTI 402
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGI 316
LI G + AL L E+ S+G+
Sbjct: 403 LIEGIAYEGLAKEALDLLNELCSRGL 428
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 161/332 (48%), Gaps = 12/332 (3%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 95
+ L + + G PD+ TYN+LIN CK GR+ L + PN +T +++
Sbjct: 101 AMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILR 160
Query: 96 GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN--- 152
+C+ R M+A L + + GC P+V T+N LIN L R G A+++ E+M
Sbjct: 161 SMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTP 220
Query: 153 ---------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
F E +D+A E M PD+VTY +++ C + A +L
Sbjct: 221 NSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEIL 280
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
++ +G P ++T+N ++D L K GK + A +LLD M + G++P+ Y++L+ G
Sbjct: 281 NQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSRE 340
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
G+V+ A + F +E +G +Y+ ++ G CK+++ + A+ M+SK KP Y
Sbjct: 341 GKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATY 400
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
L + + A L +E+ G+ +
Sbjct: 401 TILIEGIAYEGLAKEALDLLNELCSRGLVKKS 432
>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
Length = 698
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 187/399 (46%), Gaps = 15/399 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L + V SL + + GL P++ YN +IN CK S +
Sbjct: 149 PTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDM 208
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++++S F P+ VTF ++I G C E + EA L + G EPN +Y LI+G
Sbjct: 209 LNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCV 268
Query: 135 TGHTIVALNLFEEMASGNGE-------------FGVEGFVDKAKELFLQMKDENINPDVV 181
G +VA +L EM G G V G V+ A + +M + + PD
Sbjct: 269 RGEAMVASDLLVEMM-GRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDAN 327
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y +I G C + AK LL EM++Q VQP+ + ++D ++ K+ +A ++ + M
Sbjct: 328 IYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFM 387
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ P+ YN ++ G+C G + A SM GC F+Y+ L++GY K +I
Sbjct: 388 EEKAC-PDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDI 446
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+L L +M+ + KP++ Y +L I A LF +MQ +G+ + Y
Sbjct: 447 SASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVL 506
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I L K +++A F + + C + + L++GL
Sbjct: 507 IGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGL 545
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 150/319 (47%), Gaps = 13/319 (4%)
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN 152
+++GLC E R+ E L GC P YN LI+G R G L L EM +
Sbjct: 87 MVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKG 146
Query: 153 ------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
G +G + K + L +M+ ++P+V Y +VI C ++A
Sbjct: 147 IIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQAS 206
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
+L +M+ P+VVTFN ++ C+ G + EA +LL I+ G+ PN Y L+ GF
Sbjct: 207 DMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGF 266
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
C+ G A +L V M G T + + LI+G + ++ AL + +M + + PD
Sbjct: 267 CVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDA 326
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
IYN L L + + A L +EM V D + Y T IDG ++ + +A ++F
Sbjct: 327 NIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEF 386
Query: 381 LRILKCELDIRAYNCLIDG 399
+ C DI AYN +I G
Sbjct: 387 MEEKACP-DIVAYNVMIKG 404
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 179/454 (39%), Gaps = 98/454 (21%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P V +N + L K + + ++ + PD+ T+N +I FC+ G
Sbjct: 177 MRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGD 236
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V +L +R PN +++T LI G C M A+ L ++ G P++ T
Sbjct: 237 VREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGA 296
Query: 128 LINGLYRTGHTIVALNLFEEMASGNG-------EFGVEGFVDK-----AKELFLQMKDEN 175
LI+GL +G AL + E+MA + G K AK L +M ++
Sbjct: 297 LIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQK 356
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+ PD YT++I GF ++ ++A+ + E M++ P++V +NV++ CK G M EA
Sbjct: 357 VQPDKFIYTTLIDGFVRSDKLSDAR-KIFEFMEEKACPDIVAYNVMIKGYCKFGMMKEAV 415
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGF----------------------------------- 260
+ M + G P+ F Y TL+DG+
Sbjct: 416 TCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGY 475
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILING-YCKNKEIEGA--------------- 304
C G A++LF M+S G V Y++LI + K+K I+ A
Sbjct: 476 CNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPND 535
Query: 305 ----------------------------------LSLYGEMLSKGIKPDVVIYNTLFVVL 330
L ++ ++S G+ P + YN + L
Sbjct: 536 ATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSL 595
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
+ + +A L D+M G D T+ + + G
Sbjct: 596 CRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYG 629
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 123/319 (38%), Gaps = 29/319 (9%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF++M + P + ++N++ K ++ + G PD +TY L++ +
Sbjct: 383 IFEFM--EEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGY 440
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K G +S +L +++ PN T+ SLI G C A LF K++ G PNV
Sbjct: 441 AKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNV 500
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMA-------SGNGEFGVEGFVD-KAKELFLQMKDE 174
Y LI L++ I A FE M + V G V+ + + D
Sbjct: 501 VHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDT 560
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
+ V RG ++ G+ P + +N I+ LC++ + +A
Sbjct: 561 KQAHEKSALLDVFRG----------------LISDGLDPRISAYNAIIFSLCRHNMLGKA 604
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
L D M G P+ + +L+ GF G + + + + Y L N
Sbjct: 605 MDLKDKMSNKGCLPDPITFLSLLYGFSSAGESGKWRSALPNEFQQDEFEIITKYMALFNQ 664
Query: 295 YCKNK---EIEGALSLYGE 310
+ + E+ L LY E
Sbjct: 665 HVTSSVVGEVSRILQLYSE 683
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 50/133 (37%)
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
RA+ L+ M +S +++ G C +E L +G P V YN L
Sbjct: 64 RARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLI 123
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
+ R L EM+ G+ TY I L + + + L +R
Sbjct: 124 DGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLS 183
Query: 388 LDIRAYNCLIDGL 400
+++ YN +I+ L
Sbjct: 184 PNVQIYNTVINAL 196
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 194/393 (49%), Gaps = 24/393 (6%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++ ++ P SFN LAK+ + D F F D+Y++ I I FC+ G
Sbjct: 63 LMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQF-DVYSFWITIKAFCENG 121
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
VS GF +L ++ +PN +T LI+ C I +A +F+++ G N + Y
Sbjct: 122 NVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYT 181
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
+ING ++ G + +GF EL+ +MK + P++ TY S+
Sbjct: 182 IMINGFFKKG------------------YKKDGF-----ELYQKMKLVGVLPNLYTYNSL 218
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I +C + A + E+ +GV N VT+N+++ LC+ G++ +A LL+ M + +
Sbjct: 219 ITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHI 278
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P +N LMDG C TG++++A ++ +G T+ +Y+ILI+G+ K
Sbjct: 279 NPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSE 338
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L EM +GI P V Y L +E+A+++F M+R G+ D TY I GLC
Sbjct: 339 LVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLC 398
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+VEA +L++++ + + + YN +I+G
Sbjct: 399 IKGNMVEASKLYKSMVEMHLQPNDVIYNTMING 431
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 160/332 (48%), Gaps = 23/332 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+ I+ K + L++++ G+ P+LYTYN LI +C+ G++S F V I
Sbjct: 180 YTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEIS 239
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+ NAVT+ LI GLC + ++ +A L +++ P T+N L++GL TG
Sbjct: 240 KRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQ-- 297
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
+DKA ++K + P +VTY +I GF + +
Sbjct: 298 ---------------------LDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVV 336
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
L+ EM D+G+ P+ VT+ ++M+ ++ +++A + LM +IG+ P+ Y L+ G
Sbjct: 337 SELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHG 396
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
C+ G + A +L+ SM M Y+ +INGYCK AL EM+ G+ P+
Sbjct: 397 LCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPN 456
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
V Y + +L + + A +L EM G+
Sbjct: 457 VASYISTIQILCKDGKSIEAKRLLKEMTEAGL 488
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 100/190 (52%)
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
Q +V +F + + C+NG + + LL M +GV PN F+Y L++ C G +++AK
Sbjct: 103 TQFDVYSFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAK 162
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
+F M+ +G + Y+I+ING+ K + LY +M G+ P++ YN+L
Sbjct: 163 VMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEY 222
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
++ AFK+FDE+ + GVA + TY I GLC+ + +A L ++
Sbjct: 223 CRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTT 282
Query: 391 RAYNCLIDGL 400
R +N L+DGL
Sbjct: 283 RTFNMLMDGL 292
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 183/372 (49%), Gaps = 35/372 (9%)
Query: 31 KHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRS--CFTPNAV 88
+H+D L L PD+ +Y LIN CK+GRV F + +++ + C PNA
Sbjct: 31 EHFDASLELAH------AQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGC-RPNAF 83
Query: 89 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM 148
T+ +L+ GLC + R+ A A+ + R P+V TYNTL+ L++ G
Sbjct: 84 TYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGR----------- 132
Query: 149 ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD 208
VD+A F QM +E P +V++ ++I G C A +A + EM+D
Sbjct: 133 ------------VDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMID 180
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
+ PN+VT++V++D LCK+ ++DEA +LLD M+ G RP+ Y L+ GF GR++
Sbjct: 181 RDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDS 240
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
A L M S GC V +Y+++I+ CK ++ A ++ E+++ P+VV Y+ L
Sbjct: 241 ALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIG 300
Query: 329 VLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
+V+ K+ EM + TY T I GL EA +FR +
Sbjct: 301 GYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVP 357
Query: 389 DIRAYNCLIDGL 400
D R Y L L
Sbjct: 358 DARTYRGLKRAL 369
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 155/345 (44%), Gaps = 36/345 (10%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F M+ P ++N L L K D ++ PD+ TYN L+
Sbjct: 66 FDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMA 125
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
++GRV ++ + P V+F ++I GLC R+ +A +F ++ P
Sbjct: 126 ALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHP 185
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
N+ TY+ +I+GL ++ +D+A++L +M E PD+
Sbjct: 186 NLVTYSVVIDGLCKSDQ-----------------------LDEAQQLLDRMVSEGCRPDL 222
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
V YT ++ GF A + A LL M+ QG P+VVT+ V++D+LCK G++D+A +
Sbjct: 223 VAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRE 282
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
++ PN Y+ L+ G+C RV+ ++ M M C V +Y+ +I G
Sbjct: 283 LVANKCSPNVVTYSALIGGYCRASRVDEGGKV---MREMACRPNVVTYNTMIWGLSMVDR 339
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
E A ++ EM G PD Y L +RA ++ D
Sbjct: 340 NEEAYGMFREMSECGFVPDARTYRGL----------KRALRMIDH 374
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 151/315 (47%), Gaps = 23/315 (7%)
Query: 86 NAVTFTSLIKGLCAESRIMEAAALF-TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNL 144
N T + +++GLC R+ +A F L + +P+V +Y TLINGL + G A +L
Sbjct: 9 NDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDL 68
Query: 145 FEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
F +M + G P+ TY +++ G C + + A+ ++
Sbjct: 69 FRKMVAAGG----------------------CRPNAFTYNALVDGLCKQDRLDAARAVIA 106
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
E + P+VVT+N +M L + G++DEA M + G P +N ++ G C
Sbjct: 107 EARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRAR 166
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
R+ A E+F M + +YS++I+G CK+ +++ A L M+S+G +PD+V Y
Sbjct: 167 RLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYT 226
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
L + +++ A L M G D TY ID LCK + +A E+FR L
Sbjct: 227 PLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVAN 286
Query: 385 KCELDIRAYNCLIDG 399
KC ++ Y+ LI G
Sbjct: 287 KCSPNVVTYSALIGG 301
>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
Length = 721
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 181/385 (47%), Gaps = 23/385 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + L K + + F + + GL PD+ TYN L+N +CK G + +
Sbjct: 341 PTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWL 400
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
LG + R+ P +T+ +LI G C + EA L ++ GC P+V TY L+NG +
Sbjct: 401 LGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRK 460
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ +A F+EM S + + PD Y + I +
Sbjct: 461 VRNLAMAREFFDEMLS-----------------------KGLQPDCFAYNTRICAELTLS 497
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
A L MM +G+ P+ VT+NVI+D LCK G + +A RL M+ G++P+ Y
Sbjct: 498 STPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYT 557
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ C G + A++L M S G +V +Y+IL++ C+ + A + +ML
Sbjct: 558 CLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDV 617
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
GI+P+ + YN L L + AF+ F EM G+A + +TY IDG C+ +A
Sbjct: 618 GIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADA 677
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+ L+ + D +N L G
Sbjct: 678 IRLYFEMHQNGIPPDYCTHNALFKG 702
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 119/376 (31%), Positives = 179/376 (47%), Gaps = 13/376 (3%)
Query: 37 LSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 96
L+ F+ + G+ PD+ N ++ R V G +L+ P VT+ +L+
Sbjct: 187 LAAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDS 246
Query: 97 LCAESRIMEAAALFTKLRVFGC--EPNVFTYNTLINGLYRTGHTIVALNLFEEM--ASGN 152
E R EA+ L ++ G N T+N +I+ L R GH A+ L + M +
Sbjct: 247 FLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKA 306
Query: 153 GEFGV---------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
F GFV KA+ L ++M++E I P VVTY ++I G A+
Sbjct: 307 SSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKF 366
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
EM G+ P+V+T+N +++ CK G + EA LL + + G+ P YNTL+DG+C
Sbjct: 367 AEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRL 426
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
G + A+ L M GC V +Y+IL+NG K + + A + EMLSKG++PD Y
Sbjct: 427 GDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAY 486
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
NT + AF+L + M G+ DT TY IDGLCK + +A L +
Sbjct: 487 NTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVS 546
Query: 384 LKCELDIRAYNCLIDG 399
+ D Y CLI
Sbjct: 547 DGLQPDCITYTCLIHA 562
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 168/384 (43%), Gaps = 28/384 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFK--RLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+FN++ LA+ H + + L RL+ +TYN LI + G V +
Sbjct: 276 TFNVVISFLAREGHLENAVKLVDSMRLSKKA---SSFTYNPLITALLERGFVRKAEALQM 332
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ P VT+ ++I GL + A F ++R G P+V TYN+L+N + G
Sbjct: 333 EMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAG 392
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+ AL L ++ + + P V+TY ++I G+C D
Sbjct: 393 NLKEALWLLGDL-----------------------RRAGLAPTVLTYNTLIDGYCRLGDL 429
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
EA+ L EM++QG P+V T+ ++M+ K + A D M+ G++P+ F YNT
Sbjct: 430 AEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTR 489
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ A +L M G +Y+++I+G CK ++ A L +M+S G+
Sbjct: 490 ICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGL 549
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+PD + Y L E + A KL + M DG+ TY + C+ + A
Sbjct: 550 QPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYG 609
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
FR + + E + YN LI L
Sbjct: 610 WFRKMLDVGIEPNEITYNVLIHAL 633
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 172/386 (44%), Gaps = 26/386 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S N L L K D F+ + PD+YT+N +I+ C++G++ V
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAES---RIMEAAALFTKLRVFGCEPNVFTYNTLING 131
I P+ T+ SLI G C + + L ++ G P T+ LING
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
+ +T A+ +FEEM K + I VVTY S+I G C
Sbjct: 274 YCKNSNTAAAVRVFEEM-----------------------KQQGIAASVVTYNSLISGLC 310
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
E L+ EM D G+ PN +TF ++ CK G M +A+ +D M + V P+
Sbjct: 311 SEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVV 370
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
+Y L+DG+ G++ A + +M G + V +Y+ LI G+ ++ + A L EM
Sbjct: 371 IYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEM 430
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
KGI+ DVV YN L L +V +A KL DEM G+ + TY T I G C I
Sbjct: 431 KEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNI 490
Query: 372 VEAVELFRTLRILKCELDIRAYNCLI 397
A E+ + + ++ YN I
Sbjct: 491 KSAYEIRTRMEKCRKRANVVTYNVFI 516
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 157/318 (49%), Gaps = 23/318 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F +L KN + + +F+ + G+ + TYN LI+ C G+V G +
Sbjct: 262 PTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKL 321
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + +PN +TF ++KG C + + +A + EP+V Y LI+G R
Sbjct: 322 MEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRR 381
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G A+ + E MA + I+P+V TY +I GF +
Sbjct: 382 LGKMEDAMAVKEAMAK-----------------------KGISPNVTTYNCLITGFSRSG 418
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
DW A LL EM ++G++ +VVT+NV++ LC G++ +A +LLD M ++G+ PN YN
Sbjct: 419 DWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYN 478
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
T++ GFC G + A E+ ME V +Y++ I +C+ +++ A L EML K
Sbjct: 479 TIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDK 538
Query: 315 GIKPDVVIYNTLFVVLFE 332
+ P+ + Y T+ + E
Sbjct: 539 CLVPNGITYETIKEGMME 556
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 144/319 (45%), Gaps = 26/319 (8%)
Query: 85 PNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNL 144
P+ + +L+ GL R+ A F P+++T+NT+I+GL R G
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQ------- 206
Query: 145 FEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY---ANDWNEAKC 201
+ KA ++ +K + P V TY S+I G+C A +
Sbjct: 207 ----------------LRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDM 250
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
LL EM++ G+ P VTF V+++ CKN A R+ + M Q G+ + YN+L+ G C
Sbjct: 251 LLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLC 310
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
G+V +L ME +G + ++ ++ G+CK + A M + ++PDVV
Sbjct: 311 SEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVV 370
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
IY L + ++E A + + M + G++ + TY I G ++ A L +
Sbjct: 371 IYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEM 430
Query: 382 RILKCELDIRAYNCLIDGL 400
+ E D+ YN LI L
Sbjct: 431 KEKGIEADVVTYNVLIGAL 449
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 97/194 (50%), Gaps = 9/194 (4%)
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
+P+ + N ++ L ++D A + ++ V P+ + +NT++ G C G++ +A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY------GEMLSKGIKPDVVIYNT 325
+ +++ G +V +Y+ LI+GYCK GA ++Y EM+ GI P V +
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKG---GAGNMYHVDMLLKEMVEAGISPTAVTFGV 269
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L + A ++F+EM++ G+AA TY + I GLC + E V+L + L
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329
Query: 386 CELDIRAYNCLIDG 399
+ + C++ G
Sbjct: 330 LSPNEITFGCVLKG 343
>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
Length = 563
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 191/411 (46%), Gaps = 15/411 (3%)
Query: 5 DYMLNMRPSPPPVC--SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
D +L MR P+C + N + + + +F + G+ P + L+
Sbjct: 24 DMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVSPMNRGFGALVVVC 83
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ G+V +L + R F+ + T T +++ LC + R + + F ++ G PNV
Sbjct: 84 CREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNV 143
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQ 170
Y I+GL + + A ++ EEM + V G+ ++A LFL+
Sbjct: 144 VNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLK 203
Query: 171 M-KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+ K + P+V TYT +I G+C A+ LL+ M++QG++PN T+ ++ CK G
Sbjct: 204 LIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGG 263
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
D A L++ M Q G PN + YN ++DGFC G++ A ++ S G +Y+
Sbjct: 264 SFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYT 323
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
ILI +CK I AL L+ M+ G PD+ Y +L + Q+E + K FD+
Sbjct: 324 ILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMI 383
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G+ TY + I G CK A+ +F + C D Y LI GL
Sbjct: 384 GLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGL 434
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 199/406 (49%), Gaps = 25/406 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLA----KNKHYDTVLSLFKRLNSTGLFPDLYTYNIL 58
+FD M SP N FG L + + V +L + G D T ++
Sbjct: 60 VFDGMTRAGVSP-----MNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVV 114
Query: 59 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC 118
+ C+ GR R+L + PN V +T+ I GLC + +A + ++ G
Sbjct: 115 VRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGL 174
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN-------------GEFGVEGFVDKAK 165
+PNV+T+ TLI+GL + G T A LF ++ + G + EG + +A+
Sbjct: 175 KPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAE 234
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
L ++M ++ + P+ TYT++I G C ++ A L+ +M +G PN+ T+N ++D
Sbjct: 235 MLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGF 294
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
CK GK+ EA ++L + G++ + Y L+ C G + A +LF M GC +
Sbjct: 295 CKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDI 354
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
+Y+ LI+ YC+ +++E + + + L G+ P Y ++ ++ + A ++F+
Sbjct: 355 EAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFER 414
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL---RILKCEL 388
M ++G AD+ TY I GLCK S + EA L+ + R++ CE+
Sbjct: 415 MVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEV 460
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 158/372 (42%), Gaps = 59/372 (15%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
+PP V ++ L K ++ + + + GL P++YT+ LI+ CK+G F
Sbjct: 139 TPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAF 198
Query: 73 VVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
+ ++++S + PN T+T +I G C E ++ A L ++ G +PN TY TLI G
Sbjct: 199 RLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGG 258
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
+ G D+A EL +MK E P++ TY +VI GFC
Sbjct: 259 HCKGGS-----------------------FDRAFELMNKMKQEGFLPNIYTYNAVIDGFC 295
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG---------------------- 229
EA +L QG++ + +T+ +++ E CK G
Sbjct: 296 KKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIE 355
Query: 230 -------------KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
+M+E+ + D + IG+ P Y +++ G+C GR A +F M
Sbjct: 356 AYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERM 415
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
GC +Y LI+G CK +E A +LY ML K + P V TL +
Sbjct: 416 VQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKT 475
Query: 337 ERAFKLFDEMQR 348
A + D + +
Sbjct: 476 SIAVSVLDRLDK 487
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 149/318 (46%), Gaps = 13/318 (4%)
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG- 151
++ R+ EAA + ++R G V T N ++ TG + A +F+ M
Sbjct: 9 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 68
Query: 152 ----NGEFGV-------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
N FG EG V++ L M + D T T V+R C + +
Sbjct: 69 VSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 128
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
M++ G PNVV + +D LCK + +A +L+ M+ G++PN + + TL+DG
Sbjct: 129 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 188
Query: 261 CLTGRVNRAKELFVSM-ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
C G RA LF+ + +S V +Y+++I GYC+ ++ A L M+ +G+KP+
Sbjct: 189 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 248
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
Y TL + +RAF+L ++M+++G + +TY IDG CK I EA ++ R
Sbjct: 249 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 308
Query: 380 TLRILKCELDIRAYNCLI 397
+ D Y LI
Sbjct: 309 MATSQGLKFDKITYTILI 326
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 156/382 (40%), Gaps = 36/382 (9%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F ++ P V ++ ++ G + L R+ GL P+ TY LI
Sbjct: 198 FRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIG 257
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK G F ++ ++ + F PN T+ ++I G C + +I EA + G +
Sbjct: 258 GHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKF 317
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
+ TY LI + GH AL+LF+ M + PD+
Sbjct: 318 DKITYTILITEHCKQGHITYALDLFDRMV-----------------------ENGCCPDI 354
Query: 181 VTYTSVIRGFCYANDWNEA-----KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
YTS+I +C E+ KCL+I G+ P T+ ++ CK G+ A
Sbjct: 355 EAYTSLISTYCQQRQMEESQKFFDKCLMI-----GLLPTKQTYTSMIAGYCKVGRSTLAL 409
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
R+ + M+Q G ++ Y L+ G C R+ AK L+ M + L Y
Sbjct: 410 RVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEY 469
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
C+ ++ A+S+ + L K + V + + L + V+ A ++ + A D
Sbjct: 470 CRREKTSIAVSVL-DRLDK--RQQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDH 526
Query: 356 WTYRTFIDGLCKNSYIVEAVEL 377
TY FI+ +N+ A E+
Sbjct: 527 ATYTGFINSCYENNRYALASEM 548
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 114/281 (40%), Gaps = 36/281 (12%)
Query: 155 FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
FG G + +A ++ L+M+ + V T V+R + A+ + M GV P
Sbjct: 13 FGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVSPM 72
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
F ++ C+ GK++E LL M + G + ++ C GR E F
Sbjct: 73 NRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFR 132
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
M G V +Y+ I+G CK + ++ A + EM+ +G+KP+V + TL L +I
Sbjct: 133 RMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIG 192
Query: 335 QVERAFKLFDE------------------------------------MQRDGVAADTWTY 358
ERAF+LF + M G+ +T TY
Sbjct: 193 WTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTY 252
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
T I G CK A EL ++ +I YN +IDG
Sbjct: 253 TTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDG 293
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 5/217 (2%)
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
++ F A EA +++EM G+ V T N ++ + G A ++ D M + G
Sbjct: 9 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 68
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
V P + L+ C G+V L +M G + + ++++ C+ +
Sbjct: 69 VSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 128
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
+ ML G P+VV Y L + V++AF + +EM G+ + +T+ T IDGL
Sbjct: 129 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 188
Query: 366 CKNSYIVEAVELFRTLRILKC---ELDIRAYNCLIDG 399
CK + A LF L+++K + ++ Y +I G
Sbjct: 189 CKIGWTERAFRLF--LKLIKSSSYKPNVHTYTVMIGG 223
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 175/333 (52%), Gaps = 26/333 (7%)
Query: 31 KHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTF 90
K D VL + + GL D+ TY +LI+ +CK G + F V ++ PN VT+
Sbjct: 409 KEADRVL---QEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTY 465
Query: 91 TSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS 150
T+L GLC + + A L ++ G E NV+TYN+LINGL + G+ A+ + EM +
Sbjct: 466 TALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEA 525
Query: 151 GNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG 210
DV TYT++I C + +++ A +L EM+D+G
Sbjct: 526 AGHRT-----------------------DVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKG 562
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
++P++ T+NV+M+ C +G+++ +LL+ M++ VRPN YN+LM +C+ +
Sbjct: 563 IKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTT 622
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
E++ M S +Y+ILI G+CK + ++ AL + EM+ KG++ Y+ L +L
Sbjct: 623 EIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLL 682
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
+ + A FD+M+ +G+ A+ Y ++D
Sbjct: 683 NKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMD 715
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 187/396 (47%), Gaps = 17/396 (4%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
VCS NIL L F ++S PD+ TY +++ +C G + + +L
Sbjct: 255 VCSHNILLKALLSAGRLKDACQHFDEMSSP---PDVVTYGTMVHGYCVRGELENAVKLLD 311
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ NA +TS+I LC + ++ +A + + + G + + T+I+G G
Sbjct: 312 EMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKG 371
Query: 137 HTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
A LFEEM NG G + +A + +M D+ ++ DVVTY
Sbjct: 372 DLAAARRLFEEMQKRGLAADRVTHTALING-LCRAGELKEADRVLQEMVDKGLDVDVVTY 430
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
T +I G+C + EA + EM+ + V PNVVT+ + D LCK G + A+ LL M
Sbjct: 431 TVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCN 490
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G+ N + YN+L++G C G + +A + ME+ G V++Y+ LI+ CK+ E +
Sbjct: 491 KGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDR 550
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A ++ EML KGIKP + YN L +VE KL + M V + TY + +
Sbjct: 551 AHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMK 610
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
C + + E+++ + + + YN LI G
Sbjct: 611 QYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKG 646
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 163/357 (45%), Gaps = 25/357 (7%)
Query: 39 LFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 98
LF+ + GL D T+ LIN C+ G + VL ++ + VT+T LI G C
Sbjct: 379 LFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYC 438
Query: 99 AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE 158
++EA + ++ PNV TY L +GL + +
Sbjct: 439 KRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCK-----------------------Q 475
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
G V A EL +M ++ + +V TY S+I G C + +A ++ EM G + +V T+
Sbjct: 476 GDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTY 535
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
++D LCK+G+ D A +L M+ G++P+ YN LM+GFC++GRV K+L M
Sbjct: 536 TTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLE 595
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
V +Y+ L+ YC +K ++ +Y M S+ + P+ YN L + ++
Sbjct: 596 KNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKE 655
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI--LKCELDIRAY 393
A EM G+ +Y I L K EA F +R L E D+ ++
Sbjct: 656 ALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSF 712
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 159/327 (48%), Gaps = 22/327 (6%)
Query: 82 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVA 141
F+ + +F L+ LC + +A L +LR +G P+ + N +++ L A
Sbjct: 195 AFSSDPASFDLLL--LC-----LPSAELLRRLRQYGLSPSPESCNAVLSRLPLDE----A 243
Query: 142 LNLFEEMASGN--------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ LF E+ N G + A + F +M PDVVTY +++ G+C
Sbjct: 244 IALFRELPDKNVCSHNILLKALLSAGRLKDACQHFDEMSSP---PDVVTYGTMVHGYCVR 300
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+ A LL EM +G++ N + ++ LC G++ +A R+L+ M GV +A V+
Sbjct: 301 GELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVF 360
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
T++ GFC G + A+ LF M+ G +++ LING C+ E++ A + EM+
Sbjct: 361 TTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVD 420
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG+ DVV Y L + + AF++ +EM VA + TY DGLCK +
Sbjct: 421 KGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRA 480
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A EL + EL++ YN LI+GL
Sbjct: 481 ANELLHEMCNKGLELNVYTYNSLINGL 507
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 166/383 (43%), Gaps = 41/383 (10%)
Query: 18 CSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGR 77
SF++L CL + L +RL GL P + N +++ ++
Sbjct: 201 ASFDLLLLCLPSAE-------LLRRLRQYGLSPSPESCNAVLSRLPLDEAIA-------- 245
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
+ R N + L+K L + R+ +A F ++ P+V TY T+++G
Sbjct: 246 LFRELPDKNVCSHNILLKALLSAGRLKDACQHFDEM---SSPPDVVTYGTMVHG------ 296
Query: 138 TIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
+ V G ++ A +L +M + + + YTSVI C +
Sbjct: 297 -----------------YCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVS 339
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
+A +L +M GV + V F ++ C G + A RL + M + G+ + + L+
Sbjct: 340 DALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALI 399
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
+G C G + A + M G V +Y++LI+GYCK + A ++ EM+ + +
Sbjct: 400 NGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVA 459
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
P+VV Y L L + V A +L EM G+ + +TY + I+GLCK + +A+ +
Sbjct: 460 PNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRI 519
Query: 378 FRTLRILKCELDIRAYNCLIDGL 400
+ D+ Y LID L
Sbjct: 520 MTEMEAAGHRTDVYTYTTLIDTL 542
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 25/204 (12%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++ L L K+ +D ++ + + G+ P + TYN+L+N FC GRV G +L
Sbjct: 532 VYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLE 591
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+L PN VT+ SL+K C + + ++ + PN TYN LI G +
Sbjct: 592 WMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKAR 651
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+ AL +EM ++K L +Y+++IR +
Sbjct: 652 NMKEALYFHQEM------------IEKGLRL-----------TASSYSALIRLLNKKKKF 688
Query: 197 NEAKCLLIEMMDQGV--QPNVVTF 218
+EA+ +M ++G+ +P+V +F
Sbjct: 689 SEARVFFDKMRNEGLTAEPDVYSF 712
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
Query: 3 IFDYML--NMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ ++ML N+RP+ V ++N L +K+ + ++K ++S + P+ TYNILI
Sbjct: 589 LLEWMLEKNVRPN---VVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIK 645
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG--C 118
CK + ++ A ++++LI+ L + + EA F K+R G
Sbjct: 646 GHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTA 705
Query: 119 EPNVFTY 125
EP+V+++
Sbjct: 706 EPDVYSF 712
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 120/397 (30%), Positives = 189/397 (47%), Gaps = 13/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V F L AK D+ LSL + S+ L D+ YN+ I+ F K+G+V +
Sbjct: 201 PTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKF 260
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
I + P+ VT+TS+I LC +R+ EA +F L P + YNT+I G
Sbjct: 261 FHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGS 320
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G A +L E + V G VD+A +F +MK ++ P++ T
Sbjct: 321 AGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMK-KDAAPNLST 379
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I C A + A L M G+ PNV T N+++D LCK+ K+DEA + + M
Sbjct: 380 YNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMD 439
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
P+ + +L+DG GRV+ A +++ M C Y+ LI + + E
Sbjct: 440 YKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKE 499
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
+Y +M+++ PD+ + NT +F+ + E+ +F+E++ D +Y I
Sbjct: 500 DGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILI 559
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
GL K + E ELF +++ C LD RAYN +IDG
Sbjct: 560 HGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDG 596
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 204/402 (50%), Gaps = 13/402 (3%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
+ S P V ++N + CL K D L +F+ + P+L TYNILI+ C+ G++
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDC 395
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
F + + ++ PN T ++ LC ++ EA A+F ++ C P+ T+ +LI+
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLID 455
Query: 131 GLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINP 178
GL + G A ++E+M + F G + +++ M ++N +P
Sbjct: 456 GLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSP 515
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D+ + + A + + + + E+ + P+ ++++++ L K G +E L
Sbjct: 516 DLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELF 575
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
M + G + YN ++DGFC G+VN+A +L M++ G TV +Y +I+G K
Sbjct: 576 YSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKI 635
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
++ A L+ E SK I+ +VVIY++L ++ +++ A+ + +E+ + G+ + +T+
Sbjct: 636 DRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTW 695
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +D L K I EA+ F++++ LKC + Y LI+GL
Sbjct: 696 NSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 191/437 (43%), Gaps = 47/437 (10%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
+ + P + ++NIL L + D L + GLFP++ T NI+++ CK ++
Sbjct: 371 KDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDE 430
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ ++ TP+ +TF SLI GL R+ +A ++ K+ C N Y +LI
Sbjct: 431 ACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIK 490
Query: 131 GLYRTGHTIVALNLFEEM--------------------ASGNGEFG-------------- 156
+ G ++++M +G E G
Sbjct: 491 NFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVP 550
Query: 157 -------------VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
GF ++ ELF MK++ D Y VI GFC N+A LL
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
EM +G +P VVT+ ++D L K ++DEA L + + N +Y++L+DGF
Sbjct: 611 EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKV 670
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
GR++ A + + G T V++++ L++ K +EI AL + M P+ V Y
Sbjct: 671 GRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTY 730
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
L L ++ + +AF + EMQ+ G+ T +Y T I GL K I EA LF +
Sbjct: 731 GILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKA 790
Query: 384 LKCELDIRAYNCLIDGL 400
D YN +I+GL
Sbjct: 791 NGGVPDSACYNAMIEGL 807
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 196/430 (45%), Gaps = 49/430 (11%)
Query: 2 CIFDYMLNMRPSP--PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILI 59
C F+ +M+ + P V + NI+ L K++ D ++F++++ PD T+ LI
Sbjct: 395 CAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLI 454
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 119
+ K+GRV + + ++L S N++ +TSLIK R + ++ + C
Sbjct: 455 DGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCS 514
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGN-----GEFGV-------EGFVDKAKEL 167
P++ NT ++ +++ G +FEE+ S + + GF ++ EL
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYEL 574
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
F MK++ D Y VI GFC N+A LL EM +G +P VVT+ ++D L K
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Query: 228 -----------------------------------NGKMDEASRLLDLMIQIGVRPNAFV 252
G++DEA +L+ ++Q G+ PN +
Sbjct: 635 IDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYT 694
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
+N+L+D +N A F SM+ + CT +Y ILING CK ++ A + EM
Sbjct: 695 WNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQ 754
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
+G+KP + Y T+ L + + A LFD + +G D+ Y I+GL + +
Sbjct: 755 KQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAM 814
Query: 373 EAVELFRTLR 382
+A LF R
Sbjct: 815 DAFSLFEETR 824
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 171/394 (43%), Gaps = 31/394 (7%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDL-YTYNILINCFCKMG 66
LN +P P + G L + K + + F+ P +YN L+ +
Sbjct: 59 LNFKPQP------EFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCR 112
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+LG + + F P+ T ++ +++ E + +R F P Y
Sbjct: 113 NFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYT 172
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
TLI H+ + L LF++M E G E P V +T++
Sbjct: 173 TLIGAFSAVNHSDMMLTLFQQMQ----ELGYE-------------------PTVHLFTTL 209
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
IRGF + A LL EM + ++V +NV +D K GK+D A + + G+
Sbjct: 210 IRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGL 269
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+P+ Y +++ C R++ A E+F +E ++Y+ +I GY + + A S
Sbjct: 270 KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYS 329
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L +KG P V+ YN + L ++ +V+ A ++F+EM++D A + TY ID LC
Sbjct: 330 LLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDA-APNLSTYNILIDMLC 388
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + A EL +++ ++R N ++D L
Sbjct: 389 RAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRL 422
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 110/248 (44%), Gaps = 12/248 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + LAK D LF+ S + ++ Y+ LI+ F K+GR+ +++
Sbjct: 620 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ TPN T+ SL+ L I EA F ++ C PN TY LINGL +
Sbjct: 680 LEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCK 739
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
A ++EM + G + +A LF + K PD
Sbjct: 740 VRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSAC 799
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G N +A L E +G+ + T V++D L KN +++A+ + ++
Sbjct: 800 YNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQAAIVGAVLR 859
Query: 243 QIGVRPNA 250
+ G +A
Sbjct: 860 ETGKARHA 867
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 126/446 (28%), Positives = 211/446 (47%), Gaps = 50/446 (11%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D+M + + P V S+ + + K+ + L +F + GL PD+ YNI+I+ F
Sbjct: 171 LLDWMWS-KDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGF 229
Query: 63 CKMGRVSHGFVVLGRILR-SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
K G G + R+++ SC PN VT+ +I GLC R E+ ++ +++ CE +
Sbjct: 230 FKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMD 289
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELF 168
+FTY++LI GL G+ A+ +++EM NG F G + ++ EL+
Sbjct: 290 LFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNG-FCRAGKIKESFELW 348
Query: 169 LQMKDENIN----------------------------------PDVVTYTSVIRGFCYAN 194
+ M EN + D TY +I G C
Sbjct: 349 VMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNG 408
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
N+A +L E D G + + ++ I+D L K G++DEA ++ M + G + V N
Sbjct: 409 HLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCN 468
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L++GF ++ A F ME+ GC+ TV SY+ LING CK + A S EML K
Sbjct: 469 PLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEK 528
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
KPD++ Y+ L L + +++ A L+ ++ G+ D + + GLC I +A
Sbjct: 529 DWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDA 588
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ L+ ++ C ++ +N L+DGL
Sbjct: 589 LLLYSNMKQSNCLPNLVTHNTLMDGL 614
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 205/435 (47%), Gaps = 51/435 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTY------------------- 55
P + ++NIL K + + L + S L PD+Y+Y
Sbjct: 147 PNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEV 206
Query: 56 ----------------NILINCFCKMGRVSHGFVVLGRILR-SCFTPNAVTFTSLIKGLC 98
NI+I+ F K G G + R+++ SC PN VT+ +I GLC
Sbjct: 207 FDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLC 266
Query: 99 AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM---------- 148
R E+ ++ +++ CE ++FTY++LI GL G+ A+ +++EM
Sbjct: 267 KMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVV 326
Query: 149 ---ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
A NG F G + ++ EL++ M EN + +VV+Y IRG EA +
Sbjct: 327 TYNALLNG-FCRAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFENRKVEEAISVWEL 384
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
+ +G + T+ V++ LCKNG +++A ++L G + +AF Y++++DG GR
Sbjct: 385 LRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGR 444
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
V+ A + M+ GC + + LING+ + ++E A+ + EM +KG P VV YNT
Sbjct: 445 VDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNT 504
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L L + + A+ EM D TY +DGLC+ I A+ L+R + +
Sbjct: 505 LINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKG 564
Query: 386 CELDIRAYNCLIDGL 400
E D+ +N L+ GL
Sbjct: 565 LEPDVTMHNILMHGL 579
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 192/376 (51%), Gaps = 28/376 (7%)
Query: 28 AKNKHYDTVLSLFKRLNST-GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
AK+K + L F+++ G P + +YN L+N F + + L PN
Sbjct: 89 AKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPN 148
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
T+ LIK + + +EA L + +P+V++Y T+ING+ ++G + AL +F+
Sbjct: 149 LQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFD 208
Query: 147 EMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
EM + + PDV+ Y +I GF D+ + K + E
Sbjct: 209 EMF-----------------------ERGLVPDVMCYNIMIDGFFKRGDYVQGK-EIWER 244
Query: 207 MDQG--VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
+ +G V PNVVT+NV+++ LCK G+ DE+ + + M + + F Y++L+ G C G
Sbjct: 245 LVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVG 304
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
V+ A E++ M V +Y+ L+NG+C+ +I+ + L+ M+ K +VV YN
Sbjct: 305 NVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELW-VMMGKENCHNVVSYN 363
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
LFE +VE A +++ ++R G AD+ TY I GLCKN ++ +A+++ + +
Sbjct: 364 IFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDG 423
Query: 385 KCELDIRAYNCLIDGL 400
+LD AY+ ++DGL
Sbjct: 424 GDKLDAFAYSSIVDGL 439
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 172/351 (49%), Gaps = 23/351 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V S+NI L +N+ + +S+++ L G D TY +LI+ CK G ++ +L
Sbjct: 359 VVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILK 418
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+A ++S++ GL + R+ EA + ++ +GCE + N LING R
Sbjct: 419 EAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRAS 478
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
A+ F EM + + +P VV+Y ++I G C A +
Sbjct: 479 KLEEAICFFREMET-----------------------KGCSPTVVSYNTLINGLCKAERF 515
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
++A + EM+++ +P+++T++++MD LC+ K+D A L ++ G+ P+ ++N L
Sbjct: 516 SDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNIL 575
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
M G C G++ A L+ +M+ C + +++ L++G K +E E A ++ M G
Sbjct: 576 MHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGF 635
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
+PD++ YN L ++ LFD+ ++G+ + T+ + + K
Sbjct: 636 QPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLK 686
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 173/360 (48%), Gaps = 19/360 (5%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF---VVLGRILRSCFTPNAVTF 90
D + ++K + + D+ TYN L+N FC+ G++ F V++G+ +C N V++
Sbjct: 307 DGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGK--ENCH--NVVSY 362
Query: 91 TSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS 150
I+GL ++ EA +++ LR G + TY LI+GL + GH AL + +E
Sbjct: 363 NIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKD 422
Query: 151 GNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
G + +G VD+A + QM +I GF A+ E
Sbjct: 423 GGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEE 482
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A C EM +G P VV++N +++ LCK + +A + M++ +P+ Y+ LMD
Sbjct: 483 AICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMD 542
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G C +++ A L+ + G V ++IL++G C +IE AL LY M P
Sbjct: 543 GLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLP 602
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
++V +NTL L++ + E A ++ M ++G D +Y + GLC I + + LF
Sbjct: 603 NLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALF 662
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 178/396 (44%), Gaps = 23/396 (5%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F M + P + S+N L + + S + G+ P+L TYNILI
Sbjct: 101 FQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISV 160
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K + +L + P+ ++ ++I G+ ++ A +F ++ G P+V
Sbjct: 161 KKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVM 220
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
YN +I+G ++ G + ++E + G+ + P+VVTY
Sbjct: 221 CYNIMIDGFFKRGDYVQGKEIWERLVKGSCVY----------------------PNVVTY 258
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
+I G C ++E+ + M + ++ T++ ++ LC G +D A + M++
Sbjct: 259 NVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVK 318
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
V + YN L++GFC G++ + EL+V M C H V SY+I I G +N+++E
Sbjct: 319 RSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENC-HNVVSYNIFIRGLFENRKVEE 377
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A+S++ + +G D Y L L + + +A K+ E + G D + Y + +D
Sbjct: 378 AISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVD 437
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
GL K + EA+ + + CEL N LI+G
Sbjct: 438 GLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLING 473
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 104/235 (44%), Gaps = 24/235 (10%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
C F M + P V S+N L L K + + S K + PD+ TY++L++
Sbjct: 484 ICFFREM-ETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMD 542
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C+ ++ + ++L P+ L+ GLC+ +I +A L++ ++ C P
Sbjct: 543 GLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLP 602
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
N+ T+NTL++GLY+ EMAS ++ M PD+
Sbjct: 603 NLVTHNTLMDGLYKAREC--------EMAS---------------VIWACMFKNGFQPDI 639
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
++Y ++G C ++ L + + G+ P +T+ +++ + K G +D S
Sbjct: 640 ISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLGPLDSLS 694
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 191/389 (49%), Gaps = 20/389 (5%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
++K + +LF + ++GL P Y LI +C+ V G+ +L + + +
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
T+ +++KG+C+ + A + ++ GC PNV Y TLI + A+ + +
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 147 EMASGNGEFGVEGFV----------------DKAKELFLQMKDENINPDVVTYTSVIRGF 190
EM E G+ + D+A+ ++M + + P+ TY + I G+
Sbjct: 477 EMK----EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
A+++ A + EM + GV PN V +++E CK K+ EA M+ G+ +A
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDA 592
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
Y LM+G +V+ A+E+F M G VFSY +LING+ K ++ A S++ E
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M+ +G+ P+V+IYN L ++E+A +L DEM G+ + TY T IDG CK+
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ EA LF +++ D Y L+DG
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 201/413 (48%), Gaps = 22/413 (5%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFG-CLAKN--KHYDTVLSLFKRLNSTGLFPDLYTYNIL 58
+FD M+ P +++ G C KN + Y+ ++ + KR + YTY +
Sbjct: 368 ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKR----NIVISPYTYGTV 423
Query: 59 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC 118
+ C G + + ++ ++ S PN V +T+LIK SR +A + +++ G
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN--------GEFGVEGFVD-----KAK 165
P++F YN+LI GL + A + EM G F + G+++ A
Sbjct: 484 APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF-ISGYIEASEFASAD 542
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
+ +M++ + P+ V T +I +C EA M+DQG+ + T+ V+M+ L
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
KN K+D+A + M G+ P+ F Y L++GF G + +A +F M G T V
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
Y++L+ G+C++ EIE A L EM KG+ P+ V Y T+ + + AF+LFDE
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
M+ G+ D++ Y T +DG C+ + + A+ +F T + C +N LI+
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALIN 774
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 189/442 (42%), Gaps = 59/442 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +N L L+K K D S + GL P+ +TY I+ + + +
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKY 544
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + PN V T LI C + +++EA + + + G + TY L+NGL++
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK 604
Query: 135 TGHTIVALNLFEEMASGNG------EFGV--EGF-----VDKAKELFLQMKDENINPDVV 181
A +F EM G G +GV GF + KA +F +M +E + P+V+
Sbjct: 605 NDKVDDAEEIFREM-RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y ++ GFC + + +AK LL EM +G+ PN VT+ I+D CK+G + EA RL D M
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV---------------- 285
G+ P++FVY TL+DG C V RA +F GC +
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKT 782
Query: 286 -----------------------FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
+Y+I+I+ CK +E A L+ +M + + P V+
Sbjct: 783 ELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVIT 842
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
Y +L ++ + F +FDE G+ D Y I+ K +A+ L +
Sbjct: 843 YTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMF 902
Query: 383 ILK-----CELDIRAYNCLIDG 399
C+L I L+ G
Sbjct: 903 AKNAVDDGCKLSISTCRALLSG 924
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 166/382 (43%), Gaps = 55/382 (14%)
Query: 41 KRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 100
K + G+ P+ LIN +CK +V ++ +A T+T L+ GL
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605
Query: 101 SRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN-------- 152
++ +A +F ++R G P+VF+Y LING + G+ A ++F+EM
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 153 ----GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD 208
G F G ++KAKEL +M + ++P+ VTY ++I G+C + D EA L EM
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL 725
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEA---------------------------------- 234
+G+ P+ + ++D C+ ++ A
Sbjct: 726 KGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELK 785
Query: 235 ----SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+RL+D +PN YN ++D C G + AKELF M++ TV +Y+
Sbjct: 786 TEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTS 845
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM---- 346
L+NGY K ++ E ++ GI+PD ++Y+ + + +A L D+M
Sbjct: 846 LLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKN 905
Query: 347 -QRDGVAADTWTYRTFIDGLCK 367
DG T R + G K
Sbjct: 906 AVDDGCKLSISTCRALLSGFAK 927
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 166/369 (44%), Gaps = 44/369 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +L L + D ++K + + D+ TY++LI C+ G V G V
Sbjct: 184 PRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDV 243
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + F + +K ES I + G P +TY+ LI+GL +
Sbjct: 244 LFKTEKE-FRTATLNVDGALK--LKESMICK-----------GLVPLKYTYDVLIDGLCK 289
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
++ AK L ++M ++ D TY+ +I G
Sbjct: 290 IKR-----------------------LEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGR 326
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ + AK L+ EM+ G+ ++ + + K G M++A L D MI G+ P A Y
Sbjct: 327 NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYA 386
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L++G+C V + EL V M+ + ++Y ++ G C + +++GA ++ EM++
Sbjct: 387 SLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS 446
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK------- 367
G +P+VVIY TL + + A ++ EM+ G+A D + Y + I GL K
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Query: 368 NSYIVEAVE 376
S++VE VE
Sbjct: 507 RSFLVEMVE 515
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 147/325 (45%), Gaps = 20/325 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+ +L +K + S+F + GL P++ YN+L+ FC+ G + +
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + PNAVT+ ++I G C + EA LF ++++ G P+ F Y TL++G R
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Query: 135 TGHTIVALNLF----EEMASGNGEFGVE-------GFVDKAKELFLQMKDENIN----PD 179
A+ +F + AS F G + E+ ++ D + + P+
Sbjct: 745 LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN 804
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
VTY +I C + AK L +M + + P V+T+ +++ K G+ E + D
Sbjct: 805 DVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFD 864
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM-----GCTHTVFSYSILING 294
I G+ P+ +Y+ +++ F G +A L M + GC ++ + L++G
Sbjct: 865 EAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSG 924
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPD 319
+ K E+E A + M+ PD
Sbjct: 925 FAKVGEMEVAEKVMENMVRLQYIPD 949
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 176/340 (51%), Gaps = 17/340 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M R P V +FN L + + + D V L+K ++ G+ PD+YTY LI F
Sbjct: 208 VFDEM--RRSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGF 265
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ GR+ + + + + PNAV FT+LI C E + L+ +RV G P++
Sbjct: 266 CRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDL 325
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG------------VEGFVDKAKELFLQ 170
YN L+NGL R + A ++ EEM + + +G +D A ++ +
Sbjct: 326 VAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQK 385
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M ++ ++ D VTYT++I G A +A+ +L EMM+ ++P+ T+ +++D C+ G
Sbjct: 386 MAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGD 445
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ +LL M G +P YN +M+G C G++ A L +M ++G + +Y+I
Sbjct: 446 VKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNI 505
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
L++G CK+ ++ + L SKG+ PD +Y +L L
Sbjct: 506 LLDGQCKHGKVANSEELES---SKGMVPDFAVYTSLISEL 542
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 191/399 (47%), Gaps = 21/399 (5%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P PVCS G +++ + + +L G+ P+ +N+L+ F ++G +
Sbjct: 153 PAPVCS-----GLMSRLPSTPEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARK 207
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
V + RS P VTF +LI G+C + L+ ++ G +P+V+TY LI G
Sbjct: 208 VFDEMRRS-VQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFC 266
Query: 134 RTGHTIVALNLFEEMA-SGNGEFGV-----------EGFVDKAKELFLQMKDENINPDVV 181
RTG A+ +F EM +G V EG V+ +L+ M+ + PD+V
Sbjct: 267 RTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLV 326
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y +++ G C A + A+ ++ EM + G++P+ VT+ ++D CK+GK+D A + M
Sbjct: 327 AYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKM 386
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ V + Y L+ G GR A+ + M +Y+++I+ +C+ ++
Sbjct: 387 AEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDV 446
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ L EM +KG KP VV YN + L ++ Q++ A L M GV+ D TY
Sbjct: 447 KTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNIL 506
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+DG CK+ + + EL + ++ D Y LI L
Sbjct: 507 LDGQCKHGKVANSEELESSKGMVP---DFAVYTSLISEL 542
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 188/397 (47%), Gaps = 35/397 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLN--------STGLFPDLYTYNILINCFCKMG 66
P V +F IL + K + D L + ++++ S + PD+ YN LI+ CK+G
Sbjct: 338 PNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVG 397
Query: 67 RVSHGFVVLGRI--LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFT 124
R G ++ R+ + C P+ +T+ LI G C I + LF ++ G PNV T
Sbjct: 398 RQQEGLGLMERMRSQKGC-APDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVT 456
Query: 125 YNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
NTL+ G+ RTG A+N F E G++G D VTYT
Sbjct: 457 VNTLVGGMCRTGRVSSAVNFFVEAQ----RRGMKG-------------------DAVTYT 493
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
++I FC N++ +A L EM+ G P+ + + ++ + G+M +AS +L + ++
Sbjct: 494 ALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKL 553
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G+RP+ YNTL+ GFC T + +R E+ ME G +Y+ LI KN +++ A
Sbjct: 554 GIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFA 613
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR-DGVAADTWTYRTFID 363
+ +M+ G+ P V Y + A ++F +M+ V +T Y I+
Sbjct: 614 QKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILIN 673
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LCKN+ + AV L ++I + YN + GL
Sbjct: 674 SLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGL 710
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 182/390 (46%), Gaps = 33/390 (8%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI-- 78
N L LA+ +++ + L +++ + P++ T+ ILIN CK RV VL ++
Sbjct: 309 NSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSG 368
Query: 79 ------LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF-GCEPNVFTYNTLING 131
+ P+ V + +LI GLC R E L ++R GC P+ TYN LI+G
Sbjct: 369 GKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDG 428
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
+ G ++K KELF +M E + P+VVT +++ G C
Sbjct: 429 FCKAGE-----------------------IEKGKELFDEMNKEGVAPNVVTVNTLVGGMC 465
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
+ A +E +G++ + VT+ +++ C ++A L + M++ G P+A
Sbjct: 466 RTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAI 525
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
VY TL+ GF GR+ A + ++ +G Y+ LI G+C+ + + EM
Sbjct: 526 VYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEM 585
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
G+KPD + YNTL + ++ A K+ +M + GV TY I+ C N
Sbjct: 586 EEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNG 645
Query: 372 VEAVELFRTLRIL-KCELDIRAYNCLIDGL 400
EA+E+F+ ++ K + YN LI+ L
Sbjct: 646 NEAMEIFKDMKAASKVPPNTVIYNILINSL 675
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 169/365 (46%), Gaps = 26/365 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ + M + + P ++N L K + LF +N G+ P++ T N L+
Sbjct: 405 LMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGM 464
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ GRVS R +AVT+T+LI C + +A LF ++ GC P+
Sbjct: 465 CRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDA 524
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
Y TLI+G F G + A + ++K I PD V
Sbjct: 525 IVYYTLISG-----------------------FSQAGRMADASFVLAELKKLGIRPDTVC 561
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I GFC N ++ +L EM + G++P+ +T+N ++ KNG + A +++ MI
Sbjct: 562 YNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMI 621
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT--HTVFSYSILINGYCKNKE 300
+ GV P Y +++ +CL G N A E+F M++ +TV Y+ILIN CKN +
Sbjct: 622 KAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVI-YNILINSLCKNNK 680
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
++ A+SL +M G+ P+ YN +F L + +E+ F+ D M D T
Sbjct: 681 VKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEI 740
Query: 361 FIDGL 365
+ L
Sbjct: 741 LTEWL 745
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 173/390 (44%), Gaps = 22/390 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLS------LFKRLNSTGLFPDLYTYNILINCFCKMGRV 68
P + +ILF L K + + +LS L + G+ + LI C+ +
Sbjct: 227 PNDATGDILFSFLLKRERNEELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKT 286
Query: 69 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTL 128
+ G+ + +++ + SL+ GL E L K+ +PNV T+ L
Sbjct: 287 NRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGIL 346
Query: 129 INGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
IN + + AL + E+M+ G G+ V+ PDVV Y ++I
Sbjct: 347 INHMCKFRRVDDALEVLEKMSGGKESGGISVSVE---------------PDVVIYNTLID 391
Query: 189 GFCYANDWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
G C E L+ M Q G P+ +T+N ++D CK G++++ L D M + GV
Sbjct: 392 GLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVA 451
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
PN NTL+ G C TGRV+ A FV + G +Y+ LIN +C E A+ L
Sbjct: 452 PNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMEL 511
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
+ EML G PD ++Y TL + ++ A + E+++ G+ DT Y T I G C+
Sbjct: 512 FNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCR 571
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ E+ + + + D YN LI
Sbjct: 572 TNKFHRVFEMLKEMEEAGLKPDTITYNTLI 601
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 152/376 (40%), Gaps = 49/376 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNST-GLFPDLYTYNILINCFCKMGRVSHGFV 73
P V +N L L K L L +R+ S G PD TYN LI+ FCK G + G
Sbjct: 381 PDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKE 440
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ + + PN VT +L+ G+C R+ A F + + G + + TY LIN
Sbjct: 441 LFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFC 500
Query: 134 RTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
+ A+ LF EM F G + A + ++K I PD V
Sbjct: 501 NVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTV 560
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y ++I GFC N ++ +L EM + G++P+ +T+N ++ KNG + A +++ M
Sbjct: 561 CYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKM 620
Query: 242 IQIGV------------------------------------RPNAFVYNTLMDGFCLTGR 265
I+ GV PN +YN L++ C +
Sbjct: 621 IKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNK 680
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
V A L M+ G T +Y+ + G K++E M+ PD +
Sbjct: 681 VKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEI 740
Query: 326 LFVVLFEIHQVERAFK 341
L L + ++ER K
Sbjct: 741 LTEWLSAVGEIERLKK 756
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 124/328 (37%), Gaps = 49/328 (14%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M N P V + N L G + + + ++ F G+ D TY LIN F
Sbjct: 441 LFDEM-NKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAF 499
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C + + +L+S +P+A+ + +LI G R+ +A+ + +L+ G P+
Sbjct: 500 CNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDT 559
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEM------------------ASGNGEFG-------- 156
YNTLI G RT + +EM AS NG+
Sbjct: 560 VCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRK 619
Query: 157 ---------------------VEGFVDKAKELFLQMKD-ENINPDVVTYTSVIRGFCYAN 194
+ G ++A E+F MK + P+ V Y +I C N
Sbjct: 620 MIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNN 679
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
A L+ +M GV PN T+N I L +++ +D MI+ P+
Sbjct: 680 KVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITME 739
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCT 282
L + G + R K+ E T
Sbjct: 740 ILTEWLSAVGEIERLKKFVAGCEVSSST 767
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 142/330 (43%), Gaps = 32/330 (9%)
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP---NVFTYNTLINGLYRTGHTI 139
T NA +F L++ + E+ LF L +P N + N ++ L R+G
Sbjct: 155 LTVNAASF--LLRASGRSELVEESLILFNDL-----DPSVKNTYLRNVWLSILLRSGRVK 207
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
AL + +EM N + LF + N ++++ ++
Sbjct: 208 DALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNEELLSEDEIVN----------- 256
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
L+++ + GV + ++ LC+N K + L MI++G + N+L+ G
Sbjct: 257 --LVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTG 314
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM-------- 311
G NR EL M M V ++ ILIN CK + ++ AL + +M
Sbjct: 315 LAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGG 374
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ-RDGVAADTWTYRTFIDGLCKNSY 370
+S ++PDVVIYNTL L ++ + + L + M+ + G A DT TY IDG CK
Sbjct: 375 ISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGE 434
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I + ELF + ++ N L+ G+
Sbjct: 435 IEKGKELFDEMNKEGVAPNVVTVNTLVGGM 464
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 190/392 (48%), Gaps = 36/392 (9%)
Query: 1 FCIFDYMLNMRPSP-PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILI 59
+ D M + P PP+ ++++ ++ Y + L + + L++ G D N++I
Sbjct: 136 LAVLDEMTSRSCVPIPPM--YHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVI 193
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL---------- 109
N C G V G +L ++ + V++ +++KGLCA R + L
Sbjct: 194 NAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEA 253
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL 169
+++ GC P++ Y T+I+G+ + GH VA E+
Sbjct: 254 LSQMAQHGCTPDIRMYATIIDGICKEGHHEVA-----------------------NEILS 290
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M + P+VV Y +V++G C A+ W +A+ LL EM + + VTFN+++D C+NG
Sbjct: 291 RMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNG 350
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+D LL+ M++ G P+ Y T+++GFC G ++ A L +M S GC SY+
Sbjct: 351 LVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYT 410
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
I++ G C + A L M+ +G P+ V +NT+ L + VE+A +L +M +
Sbjct: 411 IVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVN 470
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
G D +Y T IDGL K EA+EL +
Sbjct: 471 GCNPDLISYSTVIDGLGKAGKTEEALELLNVM 502
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 185/402 (46%), Gaps = 22/402 (5%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCK----------MGRVSH 70
N++ + D L + ++L G D+ +YN ++ C M +
Sbjct: 190 NLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVK 249
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
L ++ + TP+ + ++I G+C E A + +++ +G +PNV YNT++
Sbjct: 250 VHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLK 309
Query: 131 GLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINP 178
G+ A L EM N F G VD+ EL QM + P
Sbjct: 310 GICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMP 369
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
DV+TYT+VI GFC +EA LL M G +PN +++ +++ LC + +A L+
Sbjct: 370 DVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELM 429
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
MIQ G PN +NT+++ C G V +A EL M GC + SYS +I+G K
Sbjct: 430 SRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKA 489
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+ E AL L M++KGI P+V+ Y+++ L ++++ ++FD +Q + +D Y
Sbjct: 490 GKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLY 549
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I LCK A++ + C + Y LI GL
Sbjct: 550 NAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGL 591
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 187/417 (44%), Gaps = 60/417 (14%)
Query: 41 KRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 100
+ L++ G + YN ++ +C++G+V + + PNA T+ +++GLC
Sbjct: 73 RALDAAGNAAGVVDYNAMVAGYCRVGQVEAARRLAAAVP---VPPNAYTYFPVVRGLCGR 129
Query: 101 SRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS-------GNG 153
RI +A A+ ++ C P Y+ +I R+G AL + E + + GN
Sbjct: 130 GRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNC 189
Query: 154 EFGV-----EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM- 207
+ +G VD+ E+ ++ D+V+Y +V++G C A W + + L+ EM+
Sbjct: 190 NLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVK 249
Query: 208 ---------DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
G P++ + I+D +CK G + A+ +L M G++PN YNT++
Sbjct: 250 VHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLK 309
Query: 259 G-----------------------------------FCLTGRVNRAKELFVSMESMGCTH 283
G FC G V+R EL M GC
Sbjct: 310 GICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMP 369
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
V +Y+ +ING+CK I+ A+ L M S G KP+ + Y + L + A +L
Sbjct: 370 DVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELM 429
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
M + G + T+ T I+ LCK + +A+EL + + + C D+ +Y+ +IDGL
Sbjct: 430 SRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGL 486
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 173/388 (44%), Gaps = 24/388 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSL----------FKRLNSTGLFPDLYTYNILINCFCKMG 66
+ S+N + L K + V L ++ G PD+ Y +I+ CK G
Sbjct: 221 IVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEG 280
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+L R+ PN V + +++KG+C+ R +A L T++ C + T+N
Sbjct: 281 HHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFN 340
Query: 127 TLINGLYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKD 173
L++ + G + L E+M NG F EG +D+A L M
Sbjct: 341 ILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVING-FCKEGLIDEAVMLLKNMPS 399
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
P+ ++YT V++G C W +A+ L+ M+ QG PN VTFN I++ LCK G +++
Sbjct: 400 CGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQ 459
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A LL M+ G P+ Y+T++DG G+ A EL M + G T V +YS +
Sbjct: 460 AIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAF 519
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
+ I+ + ++ + I+ D V+YN + L + + + A M +G
Sbjct: 520 ALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMP 579
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+ TY I GL + EA +L L
Sbjct: 580 NESTYTALIKGLASEGLLCEAQDLLSEL 607
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 148/296 (50%), Gaps = 23/296 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+FNIL +N D V+ L +++ G PD+ TY +IN FCK G + ++L +
Sbjct: 338 TFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNM 397
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PN +++T ++KGLC+ R ++A L +++ GC PN T+NT+IN L +
Sbjct: 398 PSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCK---- 453
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+G V++A EL QM NPD+++Y++VI G A E
Sbjct: 454 -------------------KGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEE 494
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A LL M+++G+ PNV+T++ + L + G++D+ ++ D + +R +A +YN ++
Sbjct: 495 ALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVIS 554
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
C + A + M S GC +Y+ LI G + A L E+ S+
Sbjct: 555 SLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSR 610
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 134/355 (37%), Gaps = 74/355 (20%)
Query: 90 FTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
++LI+ LC R +A L G V YN ++ G R G
Sbjct: 55 LSALIRSLCVAGRTADA---VRALDAAGNAAGVVDYNAMVAGYCRVGQ------------ 99
Query: 150 SGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
V+ A+ L + + P+ TY V+RG C +A +L EM +
Sbjct: 100 -----------VEAARRLAAAVP---VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSR 145
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLD---------------LMIQI---------- 244
P ++VI++ C++G A R+L+ L+I
Sbjct: 146 SCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEG 205
Query: 245 ----------GVRPNAFVYNTLMDGFCLTGRVNRAKEL----------FVSMESMGCTHT 284
G + YN ++ G C R +EL M GCT
Sbjct: 206 LEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPD 265
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
+ Y+ +I+G CK E A + M S G+KP+VV YNT+ + + E+A +L
Sbjct: 266 IRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLT 325
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
EM + D T+ +D C+N + +EL + C D+ Y +I+G
Sbjct: 326 EMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVING 380
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 183/387 (47%), Gaps = 24/387 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S N L AK D V FK + G P ++TYNI+I+C CK G V +
Sbjct: 58 PKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGL 117
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ P+ VT+ S+I G R+ + F +++ CEP+V TYN LIN +
Sbjct: 118 FEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCK 177
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G + K E F +MK + P+VV+Y++++ FC
Sbjct: 178 FGK-----------------------LPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEG 214
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+A ++M G+ PN T+ ++D CK G + +A RL + M+Q+GV N Y
Sbjct: 215 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYT 274
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DG C L M + TV ++ +LI+G CKNK + A+ +G + +
Sbjct: 275 ALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISND 334
Query: 315 -GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
G++ + IY + L + +QVE A LF++M + G+ D Y + +DG K ++E
Sbjct: 335 FGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLE 394
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A+ L + +LD+ AY L+ GL
Sbjct: 395 ALALRDKMVETGMKLDLLAYTSLVWGL 421
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 176/367 (47%), Gaps = 30/367 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N + K D + F+ + PD+ TYN LINCFCK G++ G
Sbjct: 128 PDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEF 187
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R+ PN V++++L+ C E + +A + +R G PN +TY +LI+ +
Sbjct: 188 FREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCK 247
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G+ A L EM + GVE +VVTYT++I G C
Sbjct: 248 IGNLSDAFRLANEML----QVGVEW-------------------NVVTYTALIDGLCGWE 284
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI----GVRPNA 250
+ E LL EM++ ++ VVTF V++D LCKN + S+ +D +I G++ NA
Sbjct: 285 NPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLV---SKAIDYFGRISNDFGLQANA 341
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
+Y ++DG C +V A LF M G +Y+ L++G K + AL+L +
Sbjct: 342 AIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK 401
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M+ G+K D++ Y +L L +Q+++A +EM +G+ D + + +
Sbjct: 402 MVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGC 461
Query: 371 IVEAVEL 377
I EAVEL
Sbjct: 462 INEAVEL 468
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 155/334 (46%), Gaps = 13/334 (3%)
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
R+ P F +L L + EA F+K++ F P + N L++ + G T
Sbjct: 18 RNVCVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTD 77
Query: 140 VALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVI 187
F++M + V EG V+ A+ LF +MK + PD VTY S+I
Sbjct: 78 GVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMI 137
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
GF ++ C EM D +P+V+T+N +++ CK GK+ + M + G++
Sbjct: 138 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLK 197
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
PN Y+TL+D FC G + +A + +V M +G ++Y+ LI+ YCK + A L
Sbjct: 198 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRL 257
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
EML G++ +VV Y L L L DEM + T+ IDGLCK
Sbjct: 258 ANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCK 317
Query: 368 NSYIVEAVELF-RTLRILKCELDIRAYNCLIDGL 400
N + +A++ F R + + Y +IDGL
Sbjct: 318 NKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGL 351
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 117/278 (42%), Gaps = 50/278 (17%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S++ L K + + + GL P+ YTY LI+ +CK+G +S F +
Sbjct: 198 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRL 257
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL--------------------- 113
+L+ N VT+T+LI GLC E L ++
Sbjct: 258 ANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCK 317
Query: 114 ------------RV---FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG------- 151
R+ FG + N Y +I+GL + A LFE+MA
Sbjct: 318 NKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRT 377
Query: 152 ------NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
+G F +G V +A L +M + + D++ YTS++ G + N +A+ L E
Sbjct: 378 AYTSLMDGNFK-QGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEE 436
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
M+ +G+ P+ V ++ + + G ++EA L +++
Sbjct: 437 MIGEGIHPDEVLCISVLKKHYELGCINEAVELQSYLMK 474
>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 178/325 (54%), Gaps = 18/325 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + N L L K +D + L+ + S LFP + TYN+L++ C+ G V +
Sbjct: 149 PAVQACNALLNGLLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSL 208
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ +++ P V +T+LI GLC+ES++MEA ++F +++ G PN++TYN L++G +
Sbjct: 209 ISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCK 268
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF---VD---------KAKELFLQMKDENINPDVVT 182
T + AL+L++ M + V F +D A+ F+QM + P+VV
Sbjct: 269 TANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVV 328
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ S+I G+ A + +EA LL+EM + P+V T+++++ C+ G ++EA +L M
Sbjct: 329 FNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRME 388
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS------MESMGCTHTVFSYSILINGYC 296
+ GV N+ VYN+L+DG+C G + +A E+F + M G +Y++++ G+
Sbjct: 389 KEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAVMLQGHL 448
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVV 321
K + + L+ +M+ GI P+ V
Sbjct: 449 NAKHMADVMMLHADMIKMGIVPNEV 473
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 179/381 (46%), Gaps = 32/381 (8%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ + +R S F +L ++ D L ++ ++ G FP + N L+N
Sbjct: 105 VFNALSQLRGSKFNPSVFGVLIIAFSEVGLVDEALRVYLKV---GAFPAVQACNALLNGL 161
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K + + ++ P VT+ L+ C + ++ A +L +++ G EP V
Sbjct: 162 LKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTV 221
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
Y TLI+GL E + +A+ +F QMKD + P++ T
Sbjct: 222 VIYTTLIHGLCS-----------------------ESKLMEAESMFRQMKDSGVFPNLYT 258
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++ G+C + +A L M+D G+QPNVVTF +++D LCK ++ A R M
Sbjct: 259 YNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMA 318
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ GV PN V+N+L+DG+ G + A +L + ME + VF+YSILI C+ +E
Sbjct: 319 KFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVE 378
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF------KLFDEMQRDGVAADTW 356
A + M +G+ + V+YN+L + +E+A K F +M+R+G+ D
Sbjct: 379 EADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDAL 438
Query: 357 TYRTFIDGLCKNSYIVEAVEL 377
Y + G ++ + + L
Sbjct: 439 AYAVMLQGHLNAKHMADVMML 459
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 156/346 (45%), Gaps = 23/346 (6%)
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
F L ++ S F P+ F LI + EA ++ K+ F P V N L+NG
Sbjct: 106 FNALSQLRGSKFNPS--VFGVLIIAFSEVGLVDEALRVYLKVGAF---PAVQACNALLNG 160
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPD 179
L + + L+ M S V +G V +AK L +M + I P
Sbjct: 161 LLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPT 220
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
VV YT++I G C + EA+ + +M D GV PN+ T+NV+MD CK + +A L
Sbjct: 221 VVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQ 280
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M+ G++PN + L+D C + A+ FV M G V ++ LI+GY K
Sbjct: 281 GMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAG 340
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
A L EM I PDV Y+ L + VE A + M+++GV A++ Y
Sbjct: 341 NCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYN 400
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILK------CELDIRAYNCLIDG 399
+ IDG CK + +A+E+F+ + D AY ++ G
Sbjct: 401 SLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAVMLQG 446
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 118/254 (46%), Gaps = 25/254 (9%)
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL---LIEMMDQGVQP------------ 213
L+ N + Y++VI A + A+CL LI+ + Q P
Sbjct: 51 LKQNPNNPTKKLHLYSAVIHYLTGAKVYPTARCLTKDLIQTLLQSCTPRRVNSLVFNALS 110
Query: 214 -------NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
N F V++ + G +DEA R+ +++G P N L++G
Sbjct: 111 QLRGSKFNPSVFGVLIIAFSEVGLVDEALRVY---LKVGAFPAVQACNALLNGLLKKSSF 167
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ EL+ +M S TV +Y++L++ C+ ++ A SL EM+ KGI+P VVIY TL
Sbjct: 168 DIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTL 227
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
L ++ A +F +M+ GV + +TY +DG CK + + +A+ L++ +
Sbjct: 228 IHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGL 287
Query: 387 ELDIRAYNCLIDGL 400
+ ++ + LID L
Sbjct: 288 QPNVVTFGILIDAL 301
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 105/275 (38%), Gaps = 57/275 (20%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + L L S+F+++ +G+FP+LYTYN+L++ +CK V +
Sbjct: 219 PTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHL 278
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV------------ 122
+L PN VTF LI LC ++ A F ++ FG PNV
Sbjct: 279 YQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSK 338
Query: 123 -----------------------FTYNTLINGLYRTGHTIVALNLFEEM----------- 148
FTY+ LI R G A ++ + M
Sbjct: 339 AGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVV 398
Query: 149 ---------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
GN E +E F KA + F M+ + PD + Y +++G A +
Sbjct: 399 YNSLIDGYCKEGNMEKALEIF--KATKFFSDMRRNGLRPDALAYAVMLQGHLNAKHMADV 456
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
L +M+ G+ PN VT V+ NG + A
Sbjct: 457 MMLHADMIKMGIVPNEVTSQVVRRGYQDNGYLKSA 491
>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
Length = 1013
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 188/396 (47%), Gaps = 12/396 (3%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P V +N L + D + + G+ P++ TY I +C+ V F
Sbjct: 201 PMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFD 260
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ ++R+ + VT ++L+ GLC + R EA ALF ++ G PN TY TLI+ L
Sbjct: 261 LYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLA 320
Query: 134 RTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
+ G L+L EM S G +G D+ K+ +N++P+ V
Sbjct: 321 KAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGV 380
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT +I C A++ +EA+ +L+EM ++ + PNVVTF+ +++ K G +D+A+ +M
Sbjct: 381 TYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMM 440
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G+ PN Y TL+DGF + A E++ M G F L+NG +N +I
Sbjct: 441 KERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKI 500
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A++L+ + G+ D V Y TL LF+ + AFK E+ + D Y F
Sbjct: 501 EEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVF 560
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
I+ LC EA +R + + D YN +I
Sbjct: 561 INCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMI 596
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 189/431 (43%), Gaps = 47/431 (10%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ ++ L L K D V + S L P+ TY +LI+ CK V VL
Sbjct: 344 LVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLL 403
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ +PN VTF+S+I G + +A ++ G PNV TY TLI+G ++
Sbjct: 404 EMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQ 463
Query: 137 HTIVALNLFEEM----------------------------------ASGNG----EFGVE 158
AL ++ +M ASG+G
Sbjct: 464 GQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYT 523
Query: 159 GFVD---KAKELFLQMK------DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
+D KA ++ K D N+ PD V Y I C + EAK L EM +
Sbjct: 524 TLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNM 583
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
G++P+ T+N ++ C+ G+ +A +LL M ++PN YNTL+ G TG V +A
Sbjct: 584 GLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKA 643
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
K L M S G + + ++ ++ +++ ++ L ++ M++ G+ D+ +YNTL V
Sbjct: 644 KYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQV 703
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
L +A + +EM G+A DT T+ I G CK+S++ A + + +
Sbjct: 704 LCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPN 763
Query: 390 IRAYNCLIDGL 400
I +N L+ GL
Sbjct: 764 IATFNTLLGGL 774
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 177/402 (44%), Gaps = 13/402 (3%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P + N L L +N D +L R D+ +N LI +C++G
Sbjct: 129 RGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHAL-DVIGWNTLIAGYCRVGDTPA 187
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
V R+ + V + +L+ G C ++ A + ++ G +PNV TY I
Sbjct: 188 ALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIV 247
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINP 178
RT A +L+E M V +G +A LF +M P
Sbjct: 248 YYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAP 307
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
+ VTY ++I A E LL EM+ +GV ++VT+ +MD L K GK DE L
Sbjct: 308 NHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTL 367
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
+ + PN Y L+D C V+ A+++ + ME + V ++S +ING+ K
Sbjct: 368 RFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKR 427
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
++ A M +GI P+VV Y TL F+ + A +++ +M +GV + +
Sbjct: 428 GLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIV 487
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ ++GL +N I EA+ LF+ LD Y LIDGL
Sbjct: 488 DSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGL 529
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 159/360 (44%), Gaps = 16/360 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ L L K T + L + PD YN+ INC C +G+ L +
Sbjct: 521 NYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEM 580
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
P+ T+ ++I C + +A L ++++ +PN+ TYNTL+ GL+ TG
Sbjct: 581 RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAV 640
Query: 139 IVALNLFEEMASGNGEFGVEGF--------------VDKAKELFLQMKDENINPDVVTYT 184
A L EM S F +D ++ M + ++ D+ Y
Sbjct: 641 EKAKYLLNEMVSAG--FSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYN 698
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
++++ CY +A +L EM+ G+ P+ +TFN ++ CK+ +D A M+
Sbjct: 699 TLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQ 758
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
+ PN +NTL+ G GR+ A + + ME G +Y IL G+ K A
Sbjct: 759 NISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEA 818
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
+ LY EM+ KG P V YN L + + +A +LF +MQ+ GV + TY + G
Sbjct: 819 MRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 171/382 (44%), Gaps = 37/382 (9%)
Query: 23 LFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSC 82
L L +N + ++LFK + +GL D Y LI+ K G + F ++
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
P+AV + I LC + EA + T++R G +P+ TYNT+I R G T AL
Sbjct: 550 MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609
Query: 143 NLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
L EM K +I P+++TY +++ G +AK L
Sbjct: 610 KLLHEM-----------------------KMSSIKPNLITYNTLVAGLFGTGAVEKAKYL 646
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
L EM+ G P+ +T ++ ++ ++D + + M+ G+ + VYNTL+ C
Sbjct: 647 LNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCY 706
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G +A + M G +++ LI G+CK+ ++ A + Y +ML + I P++
Sbjct: 707 HGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIAT 766
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
+NTL L + ++ A + EM++ G+ + TY G K S VEA+ L+
Sbjct: 767 FNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLY---- 822
Query: 383 ILKCEL-------DIRAYNCLI 397
CE+ + YN LI
Sbjct: 823 ---CEMVGKGFVPKVSTYNALI 841
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 176/405 (43%), Gaps = 25/405 (6%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ RP+ P S N L + + ++L + P YNIL+
Sbjct: 66 IRFRPADP--ASLNALLYSHCRLRLLRPAIALLRSSR-----PTTVAYNILLAALSDH-- 116
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP-NVFTYN 126
+H VL + + + VT +L+ GLC ++ AAAL R G +V +N
Sbjct: 117 -AHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALAD--RGGGIHALDVIGWN 173
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDE 174
TLI G R G T AL++ + M + V G+ VD A+ + MK+
Sbjct: 174 TLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEA 233
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
++P+V TYT I +C EA L M+ GV +VVT + ++ LC++G+ EA
Sbjct: 234 GVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEA 293
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
L M ++G PN Y TL+D GR L M S G + +Y+ L++
Sbjct: 294 YALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDW 353
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
K + + LS + P+ V Y L L + H V+ A ++ EM+ ++ +
Sbjct: 354 LGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPN 413
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
T+ + I+G K + +A E R ++ ++ Y LIDG
Sbjct: 414 VVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDG 458
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 146/337 (43%), Gaps = 12/337 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +N+ CL + S + + GL PD TYN +I C+ G + +
Sbjct: 552 PDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKL 611
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + S PN +T+ +L+ GL + +A L ++ G P+ T+ ++ +
Sbjct: 612 LHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQ 671
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
+ V L++ E M + + G KA + +M I PD +T
Sbjct: 672 SRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTIT 731
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ ++I G C ++ + A +M+ Q + PN+ TFN ++ L G++ EA +L M
Sbjct: 732 FNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEME 791
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ PN Y+ L G A L+ M G V +Y+ LI+ + K +
Sbjct: 792 KSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMT 851
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
A L+ +M +G+ P Y+ L +++ + +++
Sbjct: 852 QAKELFKDMQKRGVHPTSCTYDILVSGWYDLAREQKS 888
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 124/271 (45%), Gaps = 24/271 (8%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ + M++ SP + +L C ++++ D +L + + + + GL D+ YN L+
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQAC-SQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVL 704
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C G VVL +L S P+ +TF +LI G C S + A A + ++ PN+
Sbjct: 705 CYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNI 764
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
T+NTL+ GL G + +A + ++M+ + P+ +T
Sbjct: 765 ATFNTLLGGLESVGR-----------------------IGEAGTVLIEMEKSGLEPNNLT 801
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y + G ++ EA L EM+ +G P V T+N ++ + K G M +A L M
Sbjct: 802 YDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQ 861
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
+ GV P + Y+ L+ G+ R +++ +
Sbjct: 862 KRGVHPTSCTYDILVSGWYDLAREQKSQNTY 892
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 104/223 (46%), Gaps = 4/223 (1%)
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P V Y ++ +D A +L EM +GV + VT N ++ LC+NG++D A+ L
Sbjct: 101 PTTVAYNILLAAL---SDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL 157
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
D I + +NTL+ G+C G A + M + G V Y+ L+ G+C+
Sbjct: 158 ADRGGGIHAL-DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCR 216
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+++ A + M G+ P+V Y V VE AF L++ M R+GV D T
Sbjct: 217 AGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVT 276
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ GLC++ EA LFR + + + Y LID L
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSL 319
>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 701
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 194/393 (49%), Gaps = 16/393 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNIL-FGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
+FD M ++R P S+ ++ GC K + L + G PD T +++
Sbjct: 204 VFDEM-SVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQR-GFIPDNATCTLILTA 261
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
C+ G V+ +++ F PN + FTSLI GLC + I +A + ++ G +PN
Sbjct: 262 LCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPN 321
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGN-------------GEFGVEGFVDKAKELF 168
V+T+ LI+GL + G T A LF ++ + G + E +++A+ LF
Sbjct: 322 VYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLF 381
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+MK++ + P+V TYT++I G C A + A L+ M D+G PN+ T+N +D LCK
Sbjct: 382 SRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKK 441
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
+ EA LL+ G+ + Y L+ C +N+A F M G +
Sbjct: 442 SRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLN 501
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ILI +C+ K+++ + L+ ++S G+ P Y ++ + ++ A K F M+R
Sbjct: 502 NILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKR 561
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
G D++TY + I GLCK S + EA +L+ +
Sbjct: 562 HGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 594
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 175/389 (44%), Gaps = 34/389 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +F L L K + + + G P++YT+ LI+ CK G F +
Sbjct: 285 PNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRL 344
Query: 75 LGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+++RS + PN T+TS+I G C E ++ A LF++++ G PNV TY TLING
Sbjct: 345 FLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC 404
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVD-------------------KAKELFLQMKDE 174
+ G A L M G EGF+ +A EL +
Sbjct: 405 KAGSFGRAYELMNLM-------GDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSC 457
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
+ D VTYT +I+ C ND N+A M G + ++ N+++ C+ KM E+
Sbjct: 458 GLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 517
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
RL L++ +G+ P Y +++ +C G ++ A + F +M+ GC F+Y LI+G
Sbjct: 518 ERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISG 577
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
CK ++ A LY M+ +G+ P V TL + + A L + + +
Sbjct: 578 LCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDK-----K 632
Query: 355 TW--TYRTFIDGLCKNSYIVEAVELFRTL 381
W T RT + LC + A F+ L
Sbjct: 633 LWIRTVRTLVRKLCSEKKVGVAALFFQKL 661
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 161/349 (46%), Gaps = 13/349 (3%)
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
F ++GR++ ++ + TP+++T +++ I A +F ++ V G P+
Sbjct: 157 FSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPD 216
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFL 169
+Y ++ G +R G A M G V++A F
Sbjct: 217 SSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFR 276
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M D P+++ +TS+I G C +A +L EM+ G +PNV T ++D LCK G
Sbjct: 277 KMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRG 336
Query: 230 KMDEASRL-LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
++A RL L L+ +PN Y +++ G+C ++NRA+ LF M+ G V +Y
Sbjct: 337 WTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTY 396
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ LING+CK A L M +G P++ YN L + + A++L ++
Sbjct: 397 TTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFS 456
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
G+ AD TY I CK + I +A+ F + E D+R N LI
Sbjct: 457 CGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILI 505
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 120/249 (48%), Gaps = 2/249 (0%)
Query: 154 EFGVE-GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
E VE G ++ A+ +F +M + PD +Y ++ G EA L M+ +G
Sbjct: 190 EIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFI 249
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
P+ T +I+ LC+NG ++ A MI +G +PN + +L+DG C G + +A E+
Sbjct: 250 PDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEM 309
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML-SKGIKPDVVIYNTLFVVLF 331
M G V++++ LI+G CK E A L+ +++ S KP+V Y ++
Sbjct: 310 LEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYC 369
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIR 391
+ ++ RA LF M+ G+ + TY T I+G CK A EL + +I
Sbjct: 370 KEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIY 429
Query: 392 AYNCLIDGL 400
YN ID L
Sbjct: 430 TYNAAIDSL 438
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 136/333 (40%), Gaps = 15/333 (4%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F ++ P V ++ + G K + LF R+ GLFP++ TY LIN
Sbjct: 342 FRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 401
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK G + ++ + F PN T+ + I LC +SR EA L K G E
Sbjct: 402 GHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEA 461
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELF 168
+ TY LI + AL F M E F + + +++ LF
Sbjct: 462 DGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLF 521
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+ + P TYTS+I +C D + A M G P+ T+ ++ LCK
Sbjct: 522 QLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKK 581
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
+DEA +L + MI G+ P TL +C + N + + +E + + +
Sbjct: 582 SMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYC---KRNDSANAMILLEPLDKKLWIRTV 638
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
L+ C K++ A + ++L K D V
Sbjct: 639 RTLVRKLCSEKKVGVAALFFQKLLEKDSSADRV 671
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 111/215 (51%), Gaps = 1/215 (0%)
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
++R F NEA ++++M +QG+ P+ +T N +++ + G ++ A + D M G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
V P++ Y ++ G G++ A M G + ++++ C+N + A+
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
+ +M+ G KP+++ + +L L + +++AF++ +EM R+G + +T+ IDGL
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 366 CKNSYIVEAVELF-RTLRILKCELDIRAYNCLIDG 399
CK + +A LF + +R + ++ Y +I G
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGG 367
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 15/181 (8%)
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
V D L NG + +A ++ M++ F GR+N A + + M++
Sbjct: 132 VTADSLLANGNLQKAHEVMRCMLR---------------NFSEIGRLNEAVGMVMDMQNQ 176
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G T + + + ++ + IE A +++ EM +G+ PD Y + + F +++ A
Sbjct: 177 GLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEA 236
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ M + G D T + LC+N + A+ FR + L + ++ + LIDG
Sbjct: 237 DRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDG 296
Query: 400 L 400
L
Sbjct: 297 L 297
>gi|22128708|gb|AAM92820.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31432840|gb|AAP54427.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
Length = 517
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 164/328 (50%), Gaps = 31/328 (9%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTG---LFPDLYTYNILINCFCKMGRVSHGFVVL 75
SFN +A++ V SLF R+ G + PDL TY+ILI C C+ GR+ GF L
Sbjct: 197 SFNRTLTDVARDSPAAAV-SLFNRMARAGADEVTPDLCTYSILIGCCCRAGRLDLGFAAL 255
Query: 76 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPNVFTYNTLINGLYR 134
G +++ F A+TF L+KGLCA+ R +A + ++ C P+VF+ L+ GL
Sbjct: 256 GNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCD 315
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ AL L MA G PDVV+YT+VI GF
Sbjct: 316 ENRSQEALELLHMMADDRGG--------------------GSPPDVVSYTTVINGFFKEG 355
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
D ++A EM+D+ + PNVVT++ I+ LCK MD+A +L+ M++ GV P+ YN
Sbjct: 356 DSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 415
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+++ G+C +G+ A M S G V +Y L+N CKN A ++ M +
Sbjct: 416 SILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARKIFDSMTKR 475
Query: 315 GIKPDVVIYNTLFV------VLFEIHQV 336
G++PD+ Y TL L E+H +
Sbjct: 476 GLEPDIATYRTLLQGYATKGALVEMHAL 503
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 141/323 (43%), Gaps = 25/323 (7%)
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
R P+A T+ G S A + +L + G +++++N + + R
Sbjct: 153 RGGGVPSAQGGTTQDLGRAGGSGTEGARHVLDELPLRGWGASIYSFNRTLTDVARD-SPA 211
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
A++LF MA + + PD+ TY+ +I C A +
Sbjct: 212 AAVSLFNRMARAGAD--------------------EVTPDLCTYSILIGCCCRAGRLDLG 251
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL-LDLMIQIGVRPNAFVYNTLMD 258
L ++ +G + +TF ++ LC + + +A + L M ++ P+ F L+
Sbjct: 252 FAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLK 311
Query: 259 GFCLTGRVNRAKELFVSM---ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
G C R A EL M G V SY+ +ING+ K + + A S Y EML +
Sbjct: 312 GLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRR 371
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
I P+VV Y+++ L + +++A ++ + M ++GV D TY + + G C + EA+
Sbjct: 372 ISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAI 431
Query: 376 ELFRTLRILKCELDIRAYNCLID 398
+ +R E ++ Y L++
Sbjct: 432 GTLKKMRSDGVEPNVVTYRSLMN 454
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 24/196 (12%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
SPP V S+ + K D S + + + P++ TY+ +I CK +
Sbjct: 337 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAM 396
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
VL ++++ P+ +T+ S++ G C+ + EA K+R G EPNV TY +L+N L
Sbjct: 397 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYL 456
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ G +A+++F M + PD+ TY ++++G+
Sbjct: 457 CKNGRCT-----------------------EARKIFDSMTKRGLEPDIATYRTLLQGYAT 493
Query: 193 ANDWNEAKCLLIEMMD 208
E LL ++MD
Sbjct: 494 KGALVEMHALL-DLMD 508
>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 195/398 (48%), Gaps = 22/398 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++NIL + +R+ GL PDL TY ILI C+MG + F +
Sbjct: 338 PDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKL 397
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++L + VT+T L+ LC RI EA L ++ V G +P++ TY+
Sbjct: 398 KEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSR------- 450
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G A+ L+EEM S +G F +G + +A+ F + ++ +++
Sbjct: 451 -GAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFE-KGAISEAQMYFDSVTKSDVAEEII 508
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y +I G+ + EA +++++G+ P +VTFN ++ CK GK+ EA +LLD +
Sbjct: 509 LYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTI 568
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
G+ P + Y TLM+G+C G ++ ++ ME+ T +Y++++ G CK +
Sbjct: 569 KVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRL 628
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
++ L M ++G+ PD + YNT+ + H +++AF+L ++M + + TY
Sbjct: 629 HESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVL 688
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I+GLC + +A L TL+ L AY +I
Sbjct: 689 INGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKA 726
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 192/409 (46%), Gaps = 39/409 (9%)
Query: 31 KHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTF 90
+H D + ++ + ++G+ + YT ILI+ C+ R+ L F P+ V+F
Sbjct: 214 RHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSF 273
Query: 91 TSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS 150
+L+ G C + A + F + +G P+V++YN L++GL G AL +M +
Sbjct: 274 NALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMEN 333
Query: 151 GNGE------------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
E F + G + A ++ +M +NPD+VTYT +I G C + E
Sbjct: 334 HGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEE 393
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR----------- 247
+ L +M+ QG++ ++VT+ V++ LCK+G++DEA LL M IG++
Sbjct: 394 SFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAV 453
Query: 248 ----------------PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
PN+FV + ++ G G ++ A+ F S+ + Y+I+
Sbjct: 454 EEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIM 513
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I+GY K I A+ Y +++ KGI P +V +N+L + ++ A KL D ++ G+
Sbjct: 514 IDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGL 573
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ TY T ++G C+ + ++ + + Y ++ GL
Sbjct: 574 VPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGL 622
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 164/352 (46%), Gaps = 24/352 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+++ M + R P I+ G K + + F + + + ++ YNI+I+ +
Sbjct: 459 LYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQM-YFDSVTKSDVAEEIILYNIMIDGY 517
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K+G + +I+ +P VTF SLI G C + ++ EA L ++V G P
Sbjct: 518 AKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTS 577
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TY TL+NG + EG + ++ +M+ + I P +T
Sbjct: 578 VTYTTLMNG-----------------------YCEEGDMHSMFDMLHEMEAKAIKPTQIT 614
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT V++G C +E+ LL M +G+ P+ +T+N ++ CK + +A +L + M+
Sbjct: 615 YTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQML 674
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q ++P+ YN L++G C+ G + A L V+++ T +Y+ +I +C +++
Sbjct: 675 QHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQ 734
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
AL + +M+ +G + + Y+ + L + + + A F M G+ D
Sbjct: 735 NALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPD 786
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 143/300 (47%), Gaps = 29/300 (9%)
Query: 98 CAESR---IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE 154
CA SR + +A + K++V + ++ TYN+L LY HT + +++ E+ +
Sbjct: 176 CAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSL---LYNLRHTDIMWDVYNEIKAS--- 229
Query: 155 FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
GV ++E NP +I G C + +A L E + P+
Sbjct: 230 -GVP-------------QNEYTNP------ILIDGLCRQSRLQDAVTFLRETGGEEFGPS 269
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
VV+FN +M CK G +D A +MI+ G+ P+ + YN L+ G C+ G + A E
Sbjct: 270 VVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTN 329
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
ME+ G + +Y+IL NG+ I GA + ML G+ PD+V Y L ++
Sbjct: 330 DMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMG 389
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
+E +FKL ++M G+ TY + LCK+ I EAV L + ++ + D+ Y+
Sbjct: 390 NIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS 449
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 184/392 (46%), Gaps = 13/392 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F L A+ D LSL + S DL YN+ I+CF K+G+V + +
Sbjct: 240 FTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELK 299
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
P+ VTFTS+I LC R+ EA LF +L P V+ YNT+I G G
Sbjct: 300 SQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFN 359
Query: 140 VALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
A +L E G +G V++A + MK + P++ +Y +I
Sbjct: 360 EAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMK-MDAAPNLTSYNILI 418
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
C A + A + M + G+ PN++T N+++D LCK ++DEA + +
Sbjct: 419 DMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCT 478
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P++ + +L+DG G+VN A L+ M G T Y+ LI + K E +
Sbjct: 479 PDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKI 538
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
Y EM+ +G PD+++ N +F+ ++E+ LF+E++ G+ D +Y I GL K
Sbjct: 539 YKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVK 598
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + +LF ++ LD RAYN +IDG
Sbjct: 599 GGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDG 630
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 204/433 (47%), Gaps = 47/433 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + NI+ L K + D S+F L+ PD T+ LI+ + G+V+ +++
Sbjct: 444 PNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYML 503
Query: 75 LGRILRSCFTPNAVTFTSLIKGL--------------------CAES------------- 101
++L S TPNAV +TSLI+ C+
Sbjct: 504 YEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFK 563
Query: 102 --RIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG--- 156
I + ALF +++ G P+V +Y+ LI+GL + G + LF EM
Sbjct: 564 AGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRA 623
Query: 157 ----VEGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
++GF V+KA +L +MK + + P VVTY SVI G + +EA L E
Sbjct: 624 YNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 683
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+ V NVV ++ ++D K G++DEA +L+ ++Q G+ PN + +N L+D ++
Sbjct: 684 SKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEID 743
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A F +M+++ C +YSI++NG CK ++ A + EM +G+KP+ + Y T+
Sbjct: 744 EALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMI 803
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
L + V A LF+ + G D+ Y I+GL + ++A LF R+ C
Sbjct: 804 SGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCR 863
Query: 388 LDIRAYNCLIDGL 400
+ + L+D L
Sbjct: 864 IYSKTCVVLLDAL 876
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 186/397 (46%), Gaps = 13/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F + G L K + D + LF+ L+S P +Y YN +I + +G+ + + +
Sbjct: 305 PDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSL 364
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R R P+ + + ++ L + ++ EA + +++ PN+ +YN LI+ L +
Sbjct: 365 LERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKM-DAAPNLTSYNILIDMLCK 423
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G AL + + M +D+A +FL + + PD VT
Sbjct: 424 AGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVT 483
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ S+I G N+A L +M+D G PN V + ++ K G+ ++ ++ M+
Sbjct: 484 FCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMM 543
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G P+ + N MD G + + + LF +++ G T V SYSILI+G K +
Sbjct: 544 HRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSK 603
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
L+ EM +G+ D YN + + +V +A++L +EM+ G+ TY + I
Sbjct: 604 DTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVI 663
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
DGL K + EA LF + +L++ Y+ LIDG
Sbjct: 664 DGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDG 700
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 193/463 (41%), Gaps = 81/463 (17%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N L +A+ ++ + + + + ++ G P T ++ F K ++ F V+ +
Sbjct: 134 AYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETM 193
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ F P +T+LI L A L +++ G E V + TLI R G
Sbjct: 194 RKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRV 253
Query: 139 IVALNLFEEMASG--NGE----------FGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
AL+L +EM S N + FG G VD A + F ++K + + PD VT+TS+
Sbjct: 254 DAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSM 313
Query: 187 IRGFCYAN-----------------------------------DWNEAKCLLIEMMDQGV 211
I C A +NEA LL +G
Sbjct: 314 IGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGC 373
Query: 212 QPNVVTF----------------------------------NVIMDELCKNGKMDEASRL 237
P+V+ + N+++D LCK G+++ A ++
Sbjct: 374 IPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNILIDMLCKAGELEAALKV 433
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
D M + G+ PN N ++D C R++ A +F+ ++ CT ++ LI+G +
Sbjct: 434 QDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGR 493
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+ ++ A LY +ML G P+ V+Y +L F+ + E K++ EM G + D
Sbjct: 494 HGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLML 553
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++D + K I + LF ++ D+R+Y+ LI GL
Sbjct: 554 LNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGL 596
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 182/397 (45%), Gaps = 19/397 (4%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNIL---FGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 57
+ +++ ML+ +P V +++ F C K + ++K + G PDL N
Sbjct: 501 YMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGH----KIYKEMMHRGCSPDLMLLNN 556
Query: 58 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 117
++C K G + G + I TP+ +++ LI GL + LF +++ G
Sbjct: 557 YMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQG 616
Query: 118 CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE-----FG--VEGF-----VDKAK 165
+ YN +I+G ++G A L EEM + + +G ++G +D+A
Sbjct: 617 LHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAY 676
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
LF + K + ++ +VV Y+S+I GF +EA +L E+M +G+ PN T+N ++D L
Sbjct: 677 MLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDAL 736
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
K ++DEA M + PN Y+ +++G C + N+A + M+ G
Sbjct: 737 VKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNT 796
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
+Y+ +I+G + + A L+ S G PD YN + L ++ A+ LF+E
Sbjct: 797 ITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEE 856
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
+ G + T +D L K + +A + LR
Sbjct: 857 TRLKGCRIYSKTCVVLLDALHKADCLEQAAIVGAVLR 893
>gi|147742776|gb|ABQ50556.1| hypothetical protein [Brassica rapa]
Length = 348
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 162/299 (54%), Gaps = 24/299 (8%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P + F+ LF +AK K Y+ VLSL K++ G+ +YT +I+INCF
Sbjct: 68 LFQSMIRSRP-LPSIIDFSRLFSAVAKTKQYELVLSLCKQMELQGIAHSIYTLSIVINCF 126
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ ++ F VLG+IL+ + P+ VTF++L+ GLC E R+ EA + ++ PN+
Sbjct: 127 CRRRKLGFAFSVLGKILKLGYEPDTVTFSTLVNGLCLEGRVSEAVVIVDRMVEMKVRPNL 186
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
T NTL+NGL ++ V +A+ L +M + PD T
Sbjct: 187 VTLNTLVNGLC-----------------------LKDQVSEAEALVDRMVEHGCQPDQFT 223
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++ C + + A LL +M D+ V+P VVT+N+I+D LCKNG DEA L + M
Sbjct: 224 YGPILNRICKSGNTVSALDLLRKMEDKKVKPQVVTYNMIIDSLCKNGNYDEALSLFNEME 283
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G++ + YN+L+ GFC GR + +L M + T V ++S LI+ + K ++
Sbjct: 284 REGIKADVITYNSLIGGFCNAGRWDDGAQLLRDMITRNITPNVVTFSALIDCFVKEGKL 342
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 121/229 (52%)
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
QM+ + I + T + VI FC A +L +++ G +P+ VTF+ +++ LC G
Sbjct: 106 QMELQGIAHSIYTLSIVINCFCRRRKLGFAFSVLGKILKLGYEPDTVTFSTLVNGLCLEG 165
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
++ EA ++D M+++ VRPN NTL++G CL +V+ A+ L M GC F+Y
Sbjct: 166 RVSEAVVIVDRMVEMKVRPNLVTLNTLVNGLCLKDQVSEAEALVDRMVEHGCQPDQFTYG 225
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
++N CK+ AL L +M K +KP VV YN + L + + A LF+EM+R+
Sbjct: 226 PILNRICKSGNTVSALDLLRKMEDKKVKPQVVTYNMIIDSLCKNGNYDEALSLFNEMERE 285
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
G+ AD TY + I G C + +L R + ++ ++ LID
Sbjct: 286 GIKADVITYNSLIGGFCNAGRWDDGAQLLRDMITRNITPNVVTFSALID 334
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 117/258 (45%), Gaps = 4/258 (1%)
Query: 142 LNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
L+ E ++SG + + VD LF M P ++ ++ + +
Sbjct: 47 LSYRERLSSGIADIKKDDAVD----LFQSMIRSRPLPSIIDFSRLFSAVAKTKQYELVLS 102
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
L +M QG+ ++ T +++++ C+ K+ A +L ++++G P+ ++TL++G C
Sbjct: 103 LCKQMELQGIAHSIYTLSIVINCFCRRRKLGFAFSVLGKILKLGYEPDTVTFSTLVNGLC 162
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
L GRV+ A + M M + + + L+NG C ++ A +L M+ G +PD
Sbjct: 163 LEGRVSEAVVIVDRMVEMKVRPNLVTLNTLVNGLCLKDQVSEAEALVDRMVEHGCQPDQF 222
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
Y + + + A L +M+ V TY ID LCKN EA+ LF +
Sbjct: 223 TYGPILNRICKSGNTVSALDLLRKMEDKKVKPQVVTYNMIIDSLCKNGNYDEALSLFNEM 282
Query: 382 RILKCELDIRAYNCLIDG 399
+ D+ YN LI G
Sbjct: 283 EREGIKADVITYNSLIGG 300
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N++ L KN +YD LSLF + G+ D+ TYN LI FC GR G +
Sbjct: 254 PQVVTYNMIIDSLCKNGNYDEALSLFNEMEREGIKADVITYNSLIGGFCNAGRWDDGAQL 313
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIM 104
L ++ TPN VTF++LI E +++
Sbjct: 314 LRDMITRNITPNVVTFSALIDCFVKEGKLI 343
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 56/125 (44%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ + + K+ + + L L +++ + P + TYN++I+ CK G +
Sbjct: 219 PDQFTYGPILNRICKSGNTVSALDLLRKMEDKKVKPQVVTYNMIIDSLCKNGNYDEALSL 278
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R + +T+ SLI G C R + A L + PNV T++ LI+ +
Sbjct: 279 FNEMEREGIKADVITYNSLIGGFCNAGRWDDGAQLLRDMITRNITPNVVTFSALIDCFVK 338
Query: 135 TGHTI 139
G I
Sbjct: 339 EGKLI 343
>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
Length = 933
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 188/396 (47%), Gaps = 12/396 (3%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P V +N L + D + + G+ P++ TY I +C+ V F
Sbjct: 201 PMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFD 260
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ ++R+ + VT ++L+ GLC + R EA ALF ++ G PN TY TLI+ L
Sbjct: 261 LYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLA 320
Query: 134 RTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
+ G L+L EM S G +G D+ K+ +N++P+ V
Sbjct: 321 KAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGV 380
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT +I C A++ +EA+ +L+EM ++ + PNVVTF+ +++ K G +D+A+ +M
Sbjct: 381 TYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMM 440
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G+ PN Y TL+DGF + A E++ M G F L+NG +N +I
Sbjct: 441 KERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKI 500
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A++L+ + G+ D V Y TL LF+ + AFK E+ + D Y F
Sbjct: 501 EEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVF 560
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
I+ LC EA +R + + D YN +I
Sbjct: 561 INCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMI 596
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 189/431 (43%), Gaps = 47/431 (10%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ ++ L L K D V + S L P+ TY +LI+ CK V VL
Sbjct: 344 LVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLL 403
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ +PN VTF+S+I G + +A ++ G PNV TY TLI+G ++
Sbjct: 404 EMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQ 463
Query: 137 HTIVALNLFEEM----------------------------------ASGNG----EFGVE 158
AL ++ +M ASG+G
Sbjct: 464 GQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYT 523
Query: 159 GFVD---KAKELFLQMK------DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
+D KA ++ K D N+ PD V Y I C + EAK L EM +
Sbjct: 524 TLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNM 583
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
G++P+ T+N ++ C+ G+ +A +LL M ++PN YNTL+ G TG V +A
Sbjct: 584 GLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKA 643
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
K L M S G + + ++ ++ +++ ++ L ++ M++ G+ D+ +YNTL V
Sbjct: 644 KYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQV 703
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
L +A + +EM G+A DT T+ I G CK+S++ A + + +
Sbjct: 704 LCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPN 763
Query: 390 IRAYNCLIDGL 400
I +N L+ GL
Sbjct: 764 IATFNTLLGGL 774
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 168/381 (44%), Gaps = 19/381 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ L L K T + L + PD YN+ INC C +G+ L +
Sbjct: 521 NYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEM 580
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
P+ T+ ++I C + +A L ++++ +PN+ TYNTL+ GL+ TG
Sbjct: 581 RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAV 640
Query: 139 IVALNLFEEMASGNGEFGVEGF--------------VDKAKELFLQMKDENINPDVVTYT 184
A L EM S F +D ++ M + ++ D+ Y
Sbjct: 641 EKAKYLLNEMVSAG--FSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYN 698
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
++++ CY +A +L EM+ G+ P+ +TFN ++ CK+ +D A M+
Sbjct: 699 TLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQ 758
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
+ PN +NTL+ G GR+ A + + ME G +Y IL G+ K A
Sbjct: 759 NISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEA 818
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
+ LY EM+ KG P V YN L + + +A +LF +MQ+ GV + TY + G
Sbjct: 819 MRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878
Query: 365 LCKNSYIVEAVELFRTLRILK 385
S I E+ + L+ +K
Sbjct: 879 W---SRIRNGTEVKKCLKDMK 896
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 167/366 (45%), Gaps = 23/366 (6%)
Query: 35 TVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 94
LS+ R+ + GL D+ YN L+ FC+ G+V VL + + PN T+T I
Sbjct: 187 AALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFI 246
Query: 95 KGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE 154
C + EA L+ + G +V T + L+ GL R G A LF EM
Sbjct: 247 VYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREM------ 300
Query: 155 FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
DK P+ VTY ++I A E LL EM+ +GV +
Sbjct: 301 -------DKV----------GAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMD 343
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
+VT+ +MD L K GK DE L + + PN Y L+D C V+ A+++ +
Sbjct: 344 LVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLL 403
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
ME + V ++S +ING+ K ++ A M +GI P+VV Y TL F+
Sbjct: 404 EMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQ 463
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
+ A +++ +M +GV + + + ++GL +N I EA+ LF+ LD Y
Sbjct: 464 GQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYT 523
Query: 395 CLIDGL 400
LIDGL
Sbjct: 524 TLIDGL 529
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 171/382 (44%), Gaps = 37/382 (9%)
Query: 23 LFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSC 82
L L +N + ++LFK + +GL D Y LI+ K G + F ++
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
P+AV + I LC + EA + T++R G +P+ TYNT+I R G T AL
Sbjct: 550 MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609
Query: 143 NLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
L EM K +I P+++TY +++ G +AK L
Sbjct: 610 KLLHEM-----------------------KMSSIKPNLITYNTLVAGLFGTGAVEKAKYL 646
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
L EM+ G P+ +T ++ ++ ++D + + M+ G+ + VYNTL+ C
Sbjct: 647 LNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCY 706
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G +A + M G +++ LI G+CK+ ++ A + Y +ML + I P++
Sbjct: 707 HGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIAT 766
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
+NTL L + ++ A + EM++ G+ + TY G K S VEA+ L+
Sbjct: 767 FNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLY---- 822
Query: 383 ILKCEL-------DIRAYNCLI 397
CE+ + YN LI
Sbjct: 823 ---CEMVGKGFVPKVSTYNALI 841
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 153/379 (40%), Gaps = 12/379 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +N+ CL + S + + GL PD TYN +I C+ G + +
Sbjct: 552 PDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKL 611
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + S PN +T+ +L+ GL + +A L ++ G P+ T+ ++ +
Sbjct: 612 LHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQ 671
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
+ V L++ E M + + G KA + +M I PD +T
Sbjct: 672 SRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTIT 731
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ ++I G C ++ + A +M+ Q + PN+ TFN ++ L G++ EA +L M
Sbjct: 732 FNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEME 791
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ PN Y+ L G A L+ M G V +Y+ LI+ + K +
Sbjct: 792 KSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMT 851
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ +M +G+ P Y+ L I K +M+ G + T
Sbjct: 852 QAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFIC 911
Query: 363 DGLCKNSYIVEAVELFRTL 381
K +A L + L
Sbjct: 912 RAFSKPGMTWQAQRLLKNL 930
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 113/249 (45%), Gaps = 15/249 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
I ++M+N + +N L L + + + + +G+ PD T+N LI
Sbjct: 681 IHEWMMNAGLHAD-ITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGH 739
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK + + F ++L +PN TF +L+ GL + RI EA + ++ G EPN
Sbjct: 740 CKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNN 799
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFL 169
TY+ L G + + + A+ L+ EM G G +F G + +AKELF
Sbjct: 800 LTYDILATGHGKQSNKVEAMRLYCEMV-GKGFVPKVSTYNALISDFTKAGMMTQAKELFK 858
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
M+ ++P TY ++ G+ + E K L +M ++G P+ T + I K G
Sbjct: 859 DMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPG 918
Query: 230 KMDEASRLL 238
+A RLL
Sbjct: 919 MTWQAQRLL 927
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 107/257 (41%), Gaps = 37/257 (14%)
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK------- 230
P V Y ++ +D A +L EM +GV + VT N ++ LC+NG+
Sbjct: 101 PTTVAYNILLAAL---SDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL 157
Query: 231 ----------MDEASRL-----------------LDLMIQIGVRPNAFVYNTLMDGFCLT 263
M A L D M G+ + YNTL+ GFC
Sbjct: 158 ADRAGGITPWMSSAGTLSLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRA 217
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
G+V+ A+ + M+ G V +Y+ I YC+ K +E A LY M+ G+ DVV
Sbjct: 218 GQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTL 277
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
+ L L + A+ LF EM + G A + TY T ID L K E + L +
Sbjct: 278 SALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVS 337
Query: 384 LKCELDIRAYNCLIDGL 400
+D+ Y L+D L
Sbjct: 338 RGVVMDLVTYTALMDWL 354
>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 933
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 188/396 (47%), Gaps = 12/396 (3%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P V +N L + D + + G+ P++ TY I +C+ V F
Sbjct: 201 PMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFD 260
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ ++R+ + VT ++L+ GLC + R EA ALF ++ G PN TY TLI+ L
Sbjct: 261 LYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLA 320
Query: 134 RTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
+ G L+L EM S G +G D+ K+ +N++P+ V
Sbjct: 321 KAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGV 380
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT +I C A++ +EA+ +L+EM ++ + PNVVTF+ +++ K G +D+A+ +M
Sbjct: 381 TYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMM 440
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G+ PN Y TL+DGF + A E++ M G F L+NG +N +I
Sbjct: 441 KERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKI 500
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A++L+ + G+ D V Y TL LF+ + AFK E+ + D Y F
Sbjct: 501 EEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVF 560
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
I+ LC EA +R + + D YN +I
Sbjct: 561 INCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMI 596
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 189/431 (43%), Gaps = 47/431 (10%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ ++ L L K D V + S L P+ TY +LI+ CK V VL
Sbjct: 344 LVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLL 403
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ +PN VTF+S+I G + +A ++ G PNV TY TLI+G ++
Sbjct: 404 EMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQ 463
Query: 137 HTIVALNLFEEM----------------------------------ASGNG----EFGVE 158
AL ++ +M ASG+G
Sbjct: 464 GQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYT 523
Query: 159 GFVD---KAKELFLQMK------DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
+D KA ++ K D N+ PD V Y I C + EAK L EM +
Sbjct: 524 TLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNM 583
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
G++P+ T+N ++ C+ G+ +A +LL M ++PN YNTL+ G TG V +A
Sbjct: 584 GLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKA 643
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
K L M S G + + ++ ++ +++ ++ L ++ M++ G+ D+ +YNTL V
Sbjct: 644 KYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQV 703
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
L +A + +EM G+A DT T+ I G CK+S++ A + + +
Sbjct: 704 LCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPN 763
Query: 390 IRAYNCLIDGL 400
I +N L+ GL
Sbjct: 764 IATFNTLLGGL 774
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 177/402 (44%), Gaps = 13/402 (3%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P + N L L +N D +L R D+ +N LI +C++G
Sbjct: 129 RGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHAL-DVIGWNTLIAGYCRVGDTPA 187
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
V R+ + V + +L+ G C ++ A + ++ G +PNV TY I
Sbjct: 188 ALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIV 247
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINP 178
RT A +L+E M V +G +A LF +M P
Sbjct: 248 YYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAP 307
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
+ VTY ++I A E LL EM+ +GV ++VT+ +MD L K GK DE L
Sbjct: 308 NHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTL 367
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
+ + PN Y L+D C V+ A+++ + ME + V ++S +ING+ K
Sbjct: 368 RFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKR 427
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
++ A M +GI P+VV Y TL F+ + A +++ +M +GV + +
Sbjct: 428 GLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIV 487
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ ++GL +N I EA+ LF+ LD Y LIDGL
Sbjct: 488 DSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGL 529
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 168/381 (44%), Gaps = 19/381 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ L L K T + L + PD YN+ INC C +G+ L +
Sbjct: 521 NYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEM 580
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
P+ T+ ++I C + +A L ++++ +PN+ TYNTL+ GL+ TG
Sbjct: 581 RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAV 640
Query: 139 IVALNLFEEMASGNGEFGVEGF--------------VDKAKELFLQMKDENINPDVVTYT 184
A L EM S F +D ++ M + ++ D+ Y
Sbjct: 641 EKAKYLLNEMVSAG--FSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYN 698
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
++++ CY +A +L EM+ G+ P+ +TFN ++ CK+ +D A M+
Sbjct: 699 TLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQ 758
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
+ PN +NTL+ G GR+ A + + ME G +Y IL G+ K A
Sbjct: 759 NISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEA 818
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
+ LY EM+ KG P V YN L + + +A +LF +MQ+ GV + TY + G
Sbjct: 819 MRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878
Query: 365 LCKNSYIVEAVELFRTLRILK 385
S I E+ + L+ +K
Sbjct: 879 W---SRIRNGTEVKKCLKDMK 896
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 171/382 (44%), Gaps = 37/382 (9%)
Query: 23 LFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSC 82
L L +N + ++LFK + +GL D Y LI+ K G + F ++
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
P+AV + I LC + EA + T++R G +P+ TYNT+I R G T AL
Sbjct: 550 MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609
Query: 143 NLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
L EM K +I P+++TY +++ G +AK L
Sbjct: 610 KLLHEM-----------------------KMSSIKPNLITYNTLVAGLFGTGAVEKAKYL 646
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
L EM+ G P+ +T ++ ++ ++D + + M+ G+ + VYNTL+ C
Sbjct: 647 LNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCY 706
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G +A + M G +++ LI G+CK+ ++ A + Y +ML + I P++
Sbjct: 707 HGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIAT 766
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
+NTL L + ++ A + EM++ G+ + TY G K S VEA+ L+
Sbjct: 767 FNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLY---- 822
Query: 383 ILKCEL-------DIRAYNCLI 397
CE+ + YN LI
Sbjct: 823 ---CEMVGKGFVPKVSTYNALI 841
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 176/405 (43%), Gaps = 25/405 (6%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ RP+ P S N L + + ++L + P YNIL+
Sbjct: 66 IRFRPADP--ASLNALLYSHCRLRLLRPAIALLRSSR-----PTTVAYNILLAALSDH-- 116
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP-NVFTYN 126
+H VL + + + VT +L+ GLC ++ AAAL R G +V +N
Sbjct: 117 -AHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALAD--RGGGIHALDVIGWN 173
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDE 174
TLI G R G T AL++ + M + V G+ VD A+ + MK+
Sbjct: 174 TLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEA 233
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
++P+V TYT I +C EA L M+ GV +VVT + ++ LC++G+ EA
Sbjct: 234 GVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEA 293
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
L M ++G PN Y TL+D GR L M S G + +Y+ L++
Sbjct: 294 YALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDW 353
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
K + + LS + P+ V Y L L + H V+ A ++ EM+ ++ +
Sbjct: 354 LGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPN 413
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
T+ + I+G K + +A E R ++ ++ Y LIDG
Sbjct: 414 VVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDG 458
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 153/379 (40%), Gaps = 12/379 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +N+ CL + S + + GL PD TYN +I C+ G + +
Sbjct: 552 PDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKL 611
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + S PN +T+ +L+ GL + +A L ++ G P+ T+ ++ +
Sbjct: 612 LHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQ 671
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
+ V L++ E M + + G KA + +M I PD +T
Sbjct: 672 SRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTIT 731
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ ++I G C ++ + A +M+ Q + PN+ TFN ++ L G++ EA +L M
Sbjct: 732 FNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEME 791
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ PN Y+ L G A L+ M G V +Y+ LI+ + K +
Sbjct: 792 KSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMT 851
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ +M +G+ P Y+ L I K +M+ G + T
Sbjct: 852 QAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFIC 911
Query: 363 DGLCKNSYIVEAVELFRTL 381
K +A L + L
Sbjct: 912 RAFSKPGMTWQAQRLLKNL 930
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 104/223 (46%), Gaps = 4/223 (1%)
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P V Y ++ +D A +L EM +GV + VT N ++ LC+NG++D A+ L
Sbjct: 101 PTTVAYNILLAAL---SDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL 157
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
D I + +NTL+ G+C G A + M + G V Y+ L+ G+C+
Sbjct: 158 ADRGGGIHAL-DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCR 216
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+++ A + M G+ P+V Y V VE AF L++ M R+GV D T
Sbjct: 217 AGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVT 276
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ GLC++ EA LFR + + + Y LID L
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSL 319
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 113/249 (45%), Gaps = 15/249 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
I ++M+N + +N L L + + + + +G+ PD T+N LI
Sbjct: 681 IHEWMMNAGLHAD-ITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGH 739
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK + + F ++L +PN TF +L+ GL + RI EA + ++ G EPN
Sbjct: 740 CKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNN 799
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFL 169
TY+ L G + + + A+ L+ EM G G +F G + +AKELF
Sbjct: 800 LTYDILATGHGKQSNKVEAMRLYCEMV-GKGFVPKVSTYNALISDFTKAGMMTQAKELFK 858
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
M+ ++P TY ++ G+ + E K L +M ++G P+ T + I K G
Sbjct: 859 DMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPG 918
Query: 230 KMDEASRLL 238
+A RLL
Sbjct: 919 MTWQAQRLL 927
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 187/387 (48%), Gaps = 29/387 (7%)
Query: 16 PVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVL 75
P S LF L K + ++ + G PD+ +N+L++ CK +++ ++
Sbjct: 189 PFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLF 248
Query: 76 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL---FTKLRVFGCEPNVFTYNTLINGL 132
G I + P V+F +LI G C + + L + RVF P+VFTY+ LINGL
Sbjct: 249 GEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVF---PDVFTYSVLINGL 305
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ EG +D A +LFL+M D + P+ VT+T++I G C
Sbjct: 306 CK-----------------------EGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCV 342
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
+ + +M+ +GV+P+V+T+N +++ LCK G + EA +L+ M Q G++P+ F
Sbjct: 343 TGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFT 402
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
Y L+DG C G + A E+ M G +++ LI+G+C+ ++ A EML
Sbjct: 403 YTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREML 462
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
GIKPD Y + + V+ FKL EMQ DG TY ++GLCK +
Sbjct: 463 EAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMK 522
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDG 399
A L + L D YN L++G
Sbjct: 523 NANMLLDAMLNLGVVPDDITYNILLEG 549
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 183/398 (45%), Gaps = 23/398 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F +L R + F++L + ++ + F+ + L ++ L +
Sbjct: 141 VFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRL 200
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K+ S + IL + P+ F L+ LC E +I EA LF ++ G P V
Sbjct: 201 MKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTV 260
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
++NTLING ++G+ +D+ L M + + PDV T
Sbjct: 261 VSFNTLINGYCKSGN-----------------------LDQGFRLKRFMMENRVFPDVFT 297
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+ +I G C ++A L +EM D+G+ PN VTF +++ C G+ D + M+
Sbjct: 298 YSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQML 357
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ GV+P+ YNTL++G C G + AK+L + M G F+Y++LI+G CK ++E
Sbjct: 358 RKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLE 417
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL + EM+ +GI+ D V + L QV A + EM G+ D TY I
Sbjct: 418 SALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVI 477
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G CK + +L + ++ + YN L++GL
Sbjct: 478 HGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGL 515
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/302 (34%), Positives = 147/302 (48%), Gaps = 20/302 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++++L L K D LF + GL P+ T+ LIN C GR G +
Sbjct: 293 PDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEI 352
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++LR P+ +T+ +LI GLC + EA L ++ G +P+ FTY LI+G +
Sbjct: 353 YQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCK 412
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
G AL + +EM E F EG V +A+ +M + I PD T
Sbjct: 413 EGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDAT 472
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT VI GFC D LL EM G P VVT+NV+++ LCK G+M A+ LLD M+
Sbjct: 473 YTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAML 532
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES-MGCTHTVFSYSILINGY---CKN 298
+GV P+ YN L++G C G +E F ++S G SY+ LI CK
Sbjct: 533 NLGVVPDDITYNILLEGHCKHGN----REDFDKLQSEKGLVQDYGSYTSLIGDLRKTCKE 588
Query: 299 KE 300
++
Sbjct: 589 RQ 590
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 158/324 (48%), Gaps = 15/324 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V SFN L K+ + D L + + +FPD++TY++LIN CK G++ +
Sbjct: 258 PTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKL 317
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ PN VTFT+LI G C R ++ ++ G +P+V TYNTLINGL +
Sbjct: 318 FLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCK 377
Query: 135 TGHTIVALNLFEEMASGN---GEFGV---------EGFVDKAKELFLQMKDENINPDVVT 182
G A L EM +F EG ++ A E+ +M E I D V
Sbjct: 378 VGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVA 437
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+T++I GFC EA+ L EM++ G++P+ T+ +++ CK G + +LL M
Sbjct: 438 FTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQ 497
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G P YN L++G C G++ A L +M ++G +Y+IL+ G+CK+ E
Sbjct: 498 CDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNRE 557
Query: 303 GALSLYGEMLSKGIKPDVVIYNTL 326
L E KG+ D Y +L
Sbjct: 558 DFDKLQSE---KGLVQDYGSYTSL 578
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 189/400 (47%), Gaps = 34/400 (8%)
Query: 16 PVCSFNILFGCLAKNKHY---DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
P + N L + N H ++LS FK L++ + + + I+ +C M F
Sbjct: 63 PSLTPNHLIDLINLNPHSLSPPSLLSFFKWLSTQ------HHFRLSIHSYCTMTH----F 112
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK-LRVFGCEPNVFTYNTLING 131
+ ++L SL++ + + A+++FT L G + ++ L+N
Sbjct: 113 LCTHKMLSEA--------QSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNA 164
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEG------------FVDKAKELFLQMKDENINPD 179
+G+ A+ F + N + A + ++ D PD
Sbjct: 165 YTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPD 224
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
V + ++ C + NEA+ L E+ +G++P VV+FN +++ CK+G +D+ RL
Sbjct: 225 VCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKR 284
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M++ V P+ F Y+ L++G C G+++ A +LF+ M G +++ LING+C
Sbjct: 285 FMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTG 344
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
+ + +Y +ML KG+KPDV+ YNTL L ++ + A KL EM + G+ D +TY
Sbjct: 345 RADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYT 404
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
IDG CK + A+E+ + + ELD A+ LI G
Sbjct: 405 MLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISG 444
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 90/230 (39%), Gaps = 58/230 (25%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P ++ +L K ++ L + K + G+ D + LI+ FC+ G+
Sbjct: 391 MTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQ 450
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V L +L + P+ T+T +I G C + + L +++ G P V TYN
Sbjct: 451 VIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNV 510
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
L+NGL + G QMK+ N+
Sbjct: 511 LLNGLCKQG---------------------------------QMKNANM----------- 526
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
LL M++ GV P+ +T+N++++ CK+G ++ +L
Sbjct: 527 --------------LLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKL 562
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/389 (31%), Positives = 185/389 (47%), Gaps = 17/389 (4%)
Query: 26 CLAKNKHYDTV----LSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRS 81
C A++ DT LS F+ + S G+ PD+ N ++ R V +L
Sbjct: 1054 CKARDATLDTCSTLCLSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLEL 1113
Query: 82 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGCEPNVFTYNTLINGLYRTGHTI 139
P+ VT+ +L+ E R + A L ++ R GC PN TYN +I GL R G
Sbjct: 1114 GIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLE 1173
Query: 140 VALNLFEEM--ASGNGEFG---------VEGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
A L E M + F G V K +L L+M++E I P VVTY ++I
Sbjct: 1174 EAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIH 1233
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
G + A+ EM G+ P+V+T+N +++ CK G + EA L + + G+ P
Sbjct: 1234 GLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAP 1293
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
YN L+DG+C G + A+ L M GC V +Y+IL+ G + + A +
Sbjct: 1294 TVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFF 1353
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
EMLSKG++PD YNT + + RAF+L + + +G+++DT TY I GLCK
Sbjct: 1354 DEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKT 1413
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ +A EL + + D Y CLI
Sbjct: 1414 GNLKDAKELQMKMVSNGLQPDCITYTCLI 1442
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 185/399 (46%), Gaps = 25/399 (6%)
Query: 3 IFDYMLNMRPSP--PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
++D L M P V ++N + L ++ + F + + GL PD+ TYN L+N
Sbjct: 1209 VYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLN 1268
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+CK G + ++ G + R+ P +T+ LI G C + EA L ++ GC P
Sbjct: 1269 GYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLP 1328
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
NV TY L+ G +LN+ + A+E F +M + + PD
Sbjct: 1329 NVCTYTILMKG---------SLNVRS--------------LAMAREFFDEMLSKGLQPDC 1365
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
Y + I D A L +M +G+ + VT+N+++ LCK G + +A L
Sbjct: 1366 FAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMK 1425
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M+ G++P+ Y L+ C G + A+++F +M S G + +++++I+ YC+
Sbjct: 1426 MVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGN 1485
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ A + +ML +G++P+ + YN L L + + + A F EM G+ A+ +TY
Sbjct: 1486 LYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTL 1545
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
IDG CK +A+ + + D + L+ G
Sbjct: 1546 LIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKG 1584
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 182/401 (45%), Gaps = 17/401 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNS--TGLFPDLYTYNILINCFCKMGRVSHGF 72
P + ++N L K D V L K + + +G P+ TYN++I + G +
Sbjct: 1117 PSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEA- 1175
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
L +R ++ T+ LI GL A + + L ++ G P V TYN +I+GL
Sbjct: 1176 AELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGL 1235
Query: 133 YRTGHTIVALNLFEEM-ASG------------NGEFGVEGFVDKAKELFLQMKDENINPD 179
++G A F EM A G NG + G + +A LF ++ + P
Sbjct: 1236 LQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNG-YCKAGNLKEALLLFGDLRRAGLAPT 1294
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
V+TY +I G+C D EA+ L EM +QG PNV T+ ++M + A D
Sbjct: 1295 VLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFD 1354
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M+ G++P+ F YNT + + G + RA EL + G + +Y+ILI+G CK
Sbjct: 1355 EMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTG 1414
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++ A L +M+S G++PD + Y L E + A K+F+ M DG+ T+
Sbjct: 1415 NLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFT 1474
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I C+ + A FR + E + YN LI L
Sbjct: 1475 VIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHAL 1515
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 139/328 (42%), Gaps = 47/328 (14%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L K + L LF L GL P + TYNILI+ +C++G + ++
Sbjct: 1258 PDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARIL 1317
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT------- 127
+ PN T+T L+KG + A F ++ G +P+ F YNT
Sbjct: 1318 KEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELI 1377
Query: 128 ----------------------------LINGLYRTGHTIVALNLFEEMASGNGEFGV-- 157
LI+GL +TG+ A L +M S +
Sbjct: 1378 LGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCIT 1437
Query: 158 ----------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
G + +A+++F M + + P VT+T +I +C + A +M+
Sbjct: 1438 YTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKML 1497
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
++GV+PN +T+NV++ LC+ G+ AS M++ G+ N + Y L+DG C G
Sbjct: 1498 EEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWE 1557
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGY 295
A + M G ++ L+ G+
Sbjct: 1558 DAMRFYFEMHQNGIHPDYLTHKALLKGF 1585
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 204/410 (49%), Gaps = 13/410 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINC 61
+FD M ++R P V +NIL + + ++KRL + ++P + TYNI+IN
Sbjct: 206 LFDEM-SVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMING 264
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK+G++ + R+ ++ +P+ TF+S+I GL A +F ++ G P+
Sbjct: 265 LCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPD 324
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNG------EFGVEGFVDKAKE-----LFLQ 170
V TYN +++GL+RTG L+ M+ N ++G +D K +
Sbjct: 325 VRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQL 384
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ + + D TY +I G C N+A +L E ++G + ++ ++ LCK G
Sbjct: 385 LHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGM 444
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+++A L+ M + + N+ V+N+L++G+ ++ A + M+S C TV SY+
Sbjct: 445 LEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNT 504
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+ING CK + A EML +G+KPD++ Y+ L L +V+ A L+ +
Sbjct: 505 IINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKR 564
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ D + I GLC + A+E+F +R + C D+ +N +++GL
Sbjct: 565 LKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGL 614
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 207/411 (50%), Gaps = 14/411 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+++ P + SFN + ++ + F + G+ P+L TYNILI
Sbjct: 100 LFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKIS 159
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK + G +L + + P+ +++ +LI L +++A LF ++ V G P+V
Sbjct: 160 CKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDV 219
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEF-GVE------------GFVDKAKELFL 169
YN LI+G R G + A +++ + + + + VE G +D++ E++
Sbjct: 220 MCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWN 279
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+MK +PD+ T++S+I G A ++N A+ + EM++ G+ P+V T+N ++ L + G
Sbjct: 280 RMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTG 339
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+++ L ++M + N YN L+ G +V +A + + G +Y
Sbjct: 340 KLNKCFELWNVMSKNNC-CNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYG 398
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
+LING CKN + AL + E ++G D Y+++ L + +E+A +L +M+++
Sbjct: 399 LLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKN 458
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++ + + I+G + + EA+ + R ++ C + +YN +I+GL
Sbjct: 459 RRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGL 509
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 186/376 (49%), Gaps = 13/376 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +F+ + L+K +++ +F+ + +GL PD+ TYN +++ + G+++ F
Sbjct: 288 PDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFE- 346
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ N V++ LI+GL ++ +A + L G + + TY LINGL +
Sbjct: 347 LWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCK 406
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G+ AL + EE + + +G +++A EL QMK +
Sbjct: 407 NGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHV 466
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ S+I G+ A EA +L EM + P VV++N I++ LCK + +A L M+
Sbjct: 467 FNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEML 526
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G++P+ Y+ L+DG C +V+ A L+ + + ++I+I+G C ++++
Sbjct: 527 EEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVD 586
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL ++ +M PD+V +NT+ L++ A K++D + G+ D +Y
Sbjct: 587 VALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITF 646
Query: 363 DGLCKNSYIVEAVELF 378
GLC + + +A+E
Sbjct: 647 KGLCSCARVSDAIEFL 662
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 180/358 (50%), Gaps = 25/358 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ S+N+L L NK + + ++ L+ GL D TY +LIN CK G ++ +L
Sbjct: 359 IVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILE 418
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ ++S++ GLC + + +A L +++ + N +N+LING R
Sbjct: 419 EAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRA- 477
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
F +E +A + +MK ++ P VV+Y ++I G C A +
Sbjct: 478 ------------------FKLE----EAISVLREMKSKDCAPTVVSYNTIINGLCKAERF 515
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
++A L EM+++G++P+++T+++++D LC+ K+D A L I ++P+ ++N +
Sbjct: 516 SDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNII 575
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ G C +V+ A E+F M + C + +++ ++ G K + AL ++ +L G+
Sbjct: 576 IHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGL 635
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFK-LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+PD++ YN F L +V A + L+D + R G+ + T+ + + + ++E
Sbjct: 636 QPDIISYNITFKGLCSCARVSDAIEFLYDALDR-GILPNAPTWNVLVRAVVDDKPLME 692
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 124/241 (51%), Gaps = 2/241 (0%)
Query: 162 DKAKELFLQMKDE-NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
D+A LF M D NP + ++ S++ F +N W EA+ G+ PN+ T+N+
Sbjct: 95 DQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNI 154
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
++ CK + ++ LL M + G+ P+ Y TL++ +G + A ELF M G
Sbjct: 155 LIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRG 214
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK-GIKPDVVIYNTLFVVLFEIHQVERA 339
V Y+ILI+G+ + + A ++ +L++ + P V YN + L ++ +++ +
Sbjct: 215 VNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDES 274
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
++++ M+++ + D +T+ + I GL K A ++F+ + D+R YN ++ G
Sbjct: 275 MEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSG 334
Query: 400 L 400
L
Sbjct: 335 L 335
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 41/93 (44%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + N + L K L ++ R+ GL PD+ +YNI C RVS
Sbjct: 602 PDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEF 661
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA 107
L L PNA T+ L++ + + +ME A
Sbjct: 662 LYDALDRGILPNAPTWNVLVRAVVDDKPLMEYA 694
>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
Length = 554
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 186/392 (47%), Gaps = 15/392 (3%)
Query: 5 DYMLNMRPSPPPVC--SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
D +L MR P+C + N + + + +F + G+ PD ++ L+
Sbjct: 124 DMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVC 183
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ G+V +L + R F+ + T T +++ LC + R + + F ++ G PNV
Sbjct: 184 CREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLEMGTPPNV 243
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQ 170
Y I+GL + + A ++ EEM + V G+ ++A LFL+
Sbjct: 244 VNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLK 303
Query: 171 M-KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+ K + P+V TYT +I G+C A+ LL+ M++QG++PN T+ ++ CK G
Sbjct: 304 LIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGG 363
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
D A L++ M Q G PN + YN ++DGFC G++ A ++ S G +Y+
Sbjct: 364 SFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYT 423
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
ILI +CK I AL L+ M+ G PD+ Y +L + Q+E + K FD+
Sbjct: 424 ILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMI 483
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
G+ TY + I G CK A+ +F +
Sbjct: 484 GLLPTKQTYTSMIAGYCKVGRSTMALRVFERM 515
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 172/354 (48%), Gaps = 13/354 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P SF L + + V +L + G D T +++ C+ GR
Sbjct: 171 PDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEF 230
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R+L PN V +T+ I GLC + +A + ++ G +PNV+T+ TLI+GL +
Sbjct: 231 FRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCK 290
Query: 135 TGHTIVALNLFEEMASGN-------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
G T A LF ++ + G + EG + +A+ L ++M ++ + P+
Sbjct: 291 IGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTN 350
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT++I G C ++ A L+ +M +G PN+ T+N ++D CK GK+ EA ++L +
Sbjct: 351 TYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMA 410
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
G++ + Y L+ C G + A +LF M GC + +Y+ LI+ YC+ +++
Sbjct: 411 TSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQM 470
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
E + + + L G+ P Y ++ ++ + A ++F+ M ++G AD+
Sbjct: 471 EESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFERMVQNGCFADS 524
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 151/320 (47%), Gaps = 25/320 (7%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F ML M +PP V ++ L K ++ + + + GL P++YT+ LI+ C
Sbjct: 231 FRRMLEM-GTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLC 289
Query: 64 KMGRVSHGFVVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K+G F + ++++S + PN T+T +I G C E ++ A L ++ G +PN
Sbjct: 290 KIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNT 349
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TY TLI G + G D+A EL +MK E P++ T
Sbjct: 350 NTYTTLIGGHCKGGS-----------------------FDRAFELMNKMKQEGFLPNIYT 386
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +VI GFC EA +L QG++ + +T+ +++ E CK G + A L D M+
Sbjct: 387 YNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMV 446
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G P+ Y +L+ +C ++ +++ F +G T +Y+ +I GYCK
Sbjct: 447 ENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRST 506
Query: 303 GALSLYGEMLSKGIKPDVVI 322
AL ++ M+ G D ++
Sbjct: 507 MALRVFERMVQNGCFADSIL 526
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 147/318 (46%), Gaps = 13/318 (4%)
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG- 151
++ R+ EAA + ++R G V T N ++ TG + A +F+ M
Sbjct: 109 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 168
Query: 152 ----NGEFGV-------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
F EG V++ L M + D T T V+R C + +
Sbjct: 169 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 228
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
M++ G PNVV + +D LCK + +A +L+ M+ G++PN + + TL+DG
Sbjct: 229 EFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 288
Query: 261 CLTGRVNRAKELFVSM-ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
C G RA LF+ + +S V +Y+++I GYC+ ++ A L M+ +G+KP+
Sbjct: 289 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 348
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
Y TL + +RAF+L ++M+++G + +TY IDG CK I EA ++ R
Sbjct: 349 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 408
Query: 380 TLRILKCELDIRAYNCLI 397
+ D Y LI
Sbjct: 409 MATSQGLKFDKITYTILI 426
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 160/357 (44%), Gaps = 24/357 (6%)
Query: 43 LNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 102
+ S GL + T N ++ + G + V + R+ P+ +F +L+ C E +
Sbjct: 129 MRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGK 188
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVD 162
+ E AL + +G F+ + T+V +L E+ G
Sbjct: 189 VEEVDALLAAMWRYG-----FSLDNATC-------TVVVRSLCEK-----------GRFK 225
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
E F +M + P+VV YT+ I G C +A +L EM+ +G++PNV T ++
Sbjct: 226 DVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLI 285
Query: 223 DELCKNGKMDEASRL-LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
D LCK G + A RL L L+ +PN Y ++ G+C G++ RA+ L V M G
Sbjct: 286 DGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGL 345
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
+Y+ LI G+CK + A L +M +G P++ YN + + +++ A+K
Sbjct: 346 KPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYK 405
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
+ G+ D TY I CK +I A++LF + C DI AY LI
Sbjct: 406 VLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIS 462
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 123/296 (41%), Gaps = 37/296 (12%)
Query: 141 ALNLFEEMASGN-GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
+L + E+ G FG G + +A ++ L+M+ + V T V+R + A
Sbjct: 98 SLPMAHEVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYA 157
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
+ + M GV P+ +F ++ C+ GK++E LL M + G + ++
Sbjct: 158 RKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRS 217
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
C GR E F M MG V +Y+ I+G CK + ++ A + EM+ +G+KP+
Sbjct: 218 LCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPN 277
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDE---------------------------------- 345
V + TL L +I ERAF+LF +
Sbjct: 278 VYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLL 337
Query: 346 --MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
M G+ +T TY T I G CK A EL ++ +I YN +IDG
Sbjct: 338 VRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDG 393
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 103/250 (41%), Gaps = 33/250 (13%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F ++ P V ++ ++ G + L R+ GL P+ TY LI
Sbjct: 298 FRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIG 357
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK G F ++ ++ + F PN T+ ++I G C + +I EA + G +
Sbjct: 358 GHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKF 417
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
+ TY LI + GH AL+LF+ M + PD+
Sbjct: 418 DKITYTILITEHCKQGHITYALDLFDRMV-----------------------ENGCCPDI 454
Query: 181 VTYTSVIRGFCYANDWNEA-----KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
YTS+I +C E+ KCL+I G+ P T+ ++ CK G+ A
Sbjct: 455 EAYTSLISTYCQQRQMEESQKFFDKCLMI-----GLLPTKQTYTSMIAGYCKVGRSTMAL 509
Query: 236 RLLDLMIQIG 245
R+ + M+Q G
Sbjct: 510 RVFERMVQNG 519
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 81/215 (37%), Gaps = 35/215 (16%)
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
++ F A EA +++EM G+ V T N ++ + G A ++ D M + G
Sbjct: 109 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 168
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
V P+ + L+ C G+V L +M G + + ++++ C+ +
Sbjct: 169 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 228
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
+ ML G P+VV Y +IDGL
Sbjct: 229 EFFRRMLEMGTPPNVV-----------------------------------NYTAWIDGL 253
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
CK Y+ +A + + + ++ + LIDGL
Sbjct: 254 CKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 288
>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
Length = 912
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 173/328 (52%), Gaps = 26/328 (7%)
Query: 52 LYTYNILINCFCKMGRVSHGFVVLGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALF 110
L++YN ++ F K R+ V +I++ P+ T+T++I+G C I A +F
Sbjct: 217 LFSYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVF 276
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQ 170
++ GC+PN+ TYNT+ING + G A+ + ++M
Sbjct: 277 DEM---GCKPNLVTYNTMINGFCKKGLMESAMKIVDQMT--------------------- 312
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ E+ PD VTYT++I G+C + EA + EM+ + +PNV+T+N I+ LC NG
Sbjct: 313 -ETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGN 371
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+DEA R++ M G++ N + +++ G C+ G+++ A M +G +Y +
Sbjct: 372 VDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGV 431
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
++N YCK + + A+SL EM S+GI P V +N +F +L E + ++A + +M++ G
Sbjct: 432 VVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLG 491
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELF 378
+ +Y T IDGLCK + VE F
Sbjct: 492 CTPNFLSYSTVIDGLCKAKGRMHEVEEF 519
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 176/385 (45%), Gaps = 26/385 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD ++ P V ++ + K + ++F + G P+L TYN +IN F
Sbjct: 239 VFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDEM---GCKPNLVTYNTMINGF 295
Query: 63 CKMGRVSHGFVVLGRILRS--CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK G + ++ ++ + C P+ VT+T+LI G C + EA ++ CEP
Sbjct: 296 CKKGLMESAMKIVDQMTETEDCM-PDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEP 354
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELF 168
NV TYN +I GL G+ A + M + V G +D A
Sbjct: 355 NVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHL 414
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+M + D Y V+ +C ++A LL EM +G+ P+V +FN + L ++
Sbjct: 415 KEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVES 474
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC-LTGRVNRAKELFVSMESMGCTHTVFS 287
GK D+A +L M Q+G PN Y+T++DG C GR++ +E M G
Sbjct: 475 GKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRNGHHLDASM 534
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF---KLFD 344
YS L+ GYC++ + A+ L+ EML G V+ + + + E+AF K F+
Sbjct: 535 YSWLVKGYCEDGNADMAMRLFCEMLDMGY---VINLESFLAFVKGLSAKEKAFEVEKFFE 591
Query: 345 EMQRDGVAADTWTYRTFID-GLCKN 368
EM R D YR +D LCKN
Sbjct: 592 EMSRRCPGIDIHKYRRILDEHLCKN 616
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 195/382 (51%), Gaps = 29/382 (7%)
Query: 22 ILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRS 81
++ L +N+ D V L+K + + P+++T+N++IN CK G+++ V+ +
Sbjct: 194 LMVALLKQNRSAD-VEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVY 252
Query: 82 CFTPNAVTFTSLIKGLC---AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
++PN V++ +LI G C ++ +A A+ ++ PN+ T+N LI+G ++ +
Sbjct: 253 GYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNL 312
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+L +F+EM D+++ P+V+TY S+I G C NE
Sbjct: 313 PGSLKVFKEML-----------------------DQDVIPNVITYNSLINGLCNGGKINE 349
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A + +M+ GVQPN++T++ +++ CKNG M EA + D + G RP +YN L+D
Sbjct: 350 AIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLID 409
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
+C G+++ L ME G V +Y+ LI G C+N IE A L+ ++ +KG+ P
Sbjct: 410 AYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-P 468
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
D+V ++ L + +A L EM + G+ TY + G CK + A +
Sbjct: 469 DLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMR 528
Query: 379 RTL-RILKCELDIRAYNCLIDG 399
+ + + +++ +YN L+ G
Sbjct: 529 TQMEKERRLRMNVASYNVLLQG 550
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 163/326 (50%), Gaps = 19/326 (5%)
Query: 15 PPVCSFNILFGC---LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P V S+N L L N ++ K + + P+L T+NILI+ F K +
Sbjct: 256 PNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGS 315
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
V +L PN +T+ SLI GLC +I EA + K+ G +PN+ TY++LING
Sbjct: 316 LKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLING 375
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVE-------------GFVDKAKELFLQMKDENINP 178
+ G AL++F+ + G G G +D L +M+ E I P
Sbjct: 376 FCKNGMMKEALDMFDSV-KGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVP 434
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
DV TY +I G C + AK L ++ ++G+ P++VTF+++M+ C G+ +A+ LL
Sbjct: 435 DVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLL 493
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES-MGCTHTVFSYSILINGYCK 297
M ++G++P YN +M G+C G + A + ME V SY++L+ GY +
Sbjct: 494 KEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQ 553
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIY 323
++E A L EML KG+ P+ + Y
Sbjct: 554 KGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 174/347 (50%), Gaps = 27/347 (7%)
Query: 56 NILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV 115
++L+ + R GF R + +A++ L+ L ++R + L+ ++
Sbjct: 157 DMLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIR 216
Query: 116 FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDEN 175
+PNVFT+N +IN L +TG ++KA+++ MK
Sbjct: 217 RKIQPNVFTFNVVINALCKTGK-----------------------MNKARDVMEDMKVYG 253
Query: 176 INPDVVTYTSVIRGFCY---ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 232
+P+VV+Y ++I G+C +A +L EM++ V PN+ TFN+++D K+ +
Sbjct: 254 YSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLP 313
Query: 233 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
+ ++ M+ V PN YN+L++G C G++N A + M S G + +Y LI
Sbjct: 314 GSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLI 373
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
NG+CKN ++ AL ++ + +G +P +YN L ++ +++ F L +EM+R+G+
Sbjct: 374 NGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 353 ADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
D TY I GLC+N I A +LF L K D+ ++ L++G
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQL-TNKGLPDLVTFHILMEG 479
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 181/380 (47%), Gaps = 19/380 (5%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM---GR 67
R P V +FN++ L K + + + + G P++ +YN LI+ +CK+ G+
Sbjct: 217 RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGK 276
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ VL ++ + +PN TF LI G + + + +F ++ PNV TYN+
Sbjct: 277 MYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNS 336
Query: 128 LINGLYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDE 174
LINGL G A+ + ++M S NG F G + +A ++F +K +
Sbjct: 337 LINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLING-FCKNGMMKEALDMFDSVKGQ 395
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
P Y +I +C ++ L EM +G+ P+V T+N ++ LC+NG ++ A
Sbjct: 396 GTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+L D + G+ P+ ++ LM+G+C G +A L M MG +Y+I++ G
Sbjct: 456 KKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKG 514
Query: 295 YCKNKEIEGALSLYGEM-LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
YCK ++ A ++ +M + ++ +V YN L + ++E A L +EM G+
Sbjct: 515 YCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVP 574
Query: 354 DTWTYRTFIDGLCKNSYIVE 373
+ TY + + ++ +
Sbjct: 575 NRITYEIVKEEMVDKGFVPD 594
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 127/245 (51%), Gaps = 38/245 (15%)
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
N + + L EM+ + +QPNV TFNV+++ LCK GKM++A +++ M G PN Y
Sbjct: 202 NRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSY 261
Query: 254 NTLMDGFCL---TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
NTL+DG+C G++ +A + M + + +++ILI+G+ K+ + G+L ++ E
Sbjct: 262 NTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKE 321
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
ML + + P+V+ YN+L L ++ A + D+M GV + TY + I+G CKN
Sbjct: 322 MLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGM 381
Query: 371 IVEAVELFRTLR----------------------------ILKCEL-------DIRAYNC 395
+ EA+++F +++ LK E+ D+ YNC
Sbjct: 382 MKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 396 LIDGL 400
LI GL
Sbjct: 442 LIAGL 446
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 100/240 (41%), Gaps = 9/240 (3%)
Query: 166 ELFLQMKDENINPDVVT--YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
ELF Q+ +NPD+ YT +++ + LL + + + +F +D
Sbjct: 69 ELFRQLISSELNPDLCLRYYTWLVKNRDISVSLELTFKLLHSLANAKRYSKIRSF---LD 125
Query: 224 ELCKNGKMDEASRLLDLMIQI-GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
+NG + + + V N+ + + L+ + R E F G
Sbjct: 126 GFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYK 185
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
+ S L+ K LY EM+ + I+P+V +N + L + ++ +A +
Sbjct: 186 LSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDV 245
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCK---NSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
++M+ G + + +Y T IDG CK N + +A + + + + ++ +N LIDG
Sbjct: 246 MEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDG 305
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 188/396 (47%), Gaps = 22/396 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRL------NSTGLFPDLYTYNILINCFCKMGRV 68
P V +F IL L K + D L +F RL N G+ PD+ +N LI+ CK+G+
Sbjct: 314 PSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKE 373
Query: 69 SHGFVVLGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
G +L + + + PN VT+ LI G A LF ++ G +PNV T NT
Sbjct: 374 EDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNT 433
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFG--------VEGF-----VDKAKELFLQMKDE 174
L++GL + G A+ F EM G G G + F +++A + F +M
Sbjct: 434 LVDGLCKHGRVHRAVEFFNEM-KGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSS 492
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
+PD V Y S+I G C A N+A ++ ++ G + +NV++ CK K++
Sbjct: 493 GCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERV 552
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
LL M + GV+P+ YNTL+ TG A ++ M G +V +Y +I+
Sbjct: 553 YELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHA 612
Query: 295 YCKNKEIEGALSLYGEMLSKG-IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
YC K ++ + ++GEM S + P+ VIYN L L + V+RA L ++M+ V
Sbjct: 613 YCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRP 672
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
+T TY + G+ + +A EL + C D
Sbjct: 673 NTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPD 708
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 195/437 (44%), Gaps = 58/437 (13%)
Query: 22 ILFGCLAKNKHY---DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
I+FG L ++ V+ L +L G+FPD + L+ C + + VL +
Sbjct: 213 IVFGELVRSGRSFPDGEVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCV 272
Query: 79 LR--------SC---------------------------FTPNAVTFTSLIKGLCAESRI 103
+R SC P+ VTF L+ LC RI
Sbjct: 273 MRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRI 332
Query: 104 MEAAALFTKLR------VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN----- 152
EA +F +LR G EP+V +NTLI+GL + G L+L EEM GN
Sbjct: 333 DEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPN 392
Query: 153 --------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
F G D+A ELF QM +E + P+V+T +++ G C + A
Sbjct: 393 TVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFN 452
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
EM +G++ N T+ ++ C ++ A + + M+ G P+A VY +L+ G C+ G
Sbjct: 453 EMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAG 512
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
R+N A + ++ G + Y++LI+G+CK K++E L EM G+KPD + YN
Sbjct: 513 RMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYN 572
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL-RI 383
TL L + A K+ ++M ++G+ TY I C + E +++F +
Sbjct: 573 TLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCST 632
Query: 384 LKCELDIRAYNCLIDGL 400
K + YN LID L
Sbjct: 633 SKVPPNTVIYNILIDAL 649
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 151/344 (43%), Gaps = 24/344 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + N L L K+ + F + GL + TY LI+ FC + ++
Sbjct: 426 PNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQC 485
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+L S +P+AV + SLI GLC R+ +A+ + +KL++ G + YN LI+G
Sbjct: 486 FEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISG--- 542
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
F + +++ EL +M++ + PD +TY ++I
Sbjct: 543 --------------------FCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTG 582
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG-VRPNAFVY 253
D+ A ++ +M+ +G++P+VVT+ I+ C +DE ++ M V PN +Y
Sbjct: 583 DFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIY 642
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N L+D C V+RA L M+ +Y+ ++ G K + A L M+
Sbjct: 643 NILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVE 702
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+ +PD + L L + ++E+ + Q A + T
Sbjct: 703 EACRPDYITMEVLTEWLSAVGEIEKLKHFVEGYQDSSYPASSQT 746
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 169/396 (42%), Gaps = 44/396 (11%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFK-RLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
S P F A H ++ S+F+ L P+ T+ + ++ F K +H
Sbjct: 79 SIPKSLQFLKYLSAKAPQHHPHSLSSVFQGSLELASRHPNSQTHLLSLHRFRK---STHP 135
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
+ L TP + + L++ L + ++ LF +L P + + L+
Sbjct: 136 TLPL--------TPKSASL--LLQCLENARLVNDSLLLFNQLDPSSKSPQLC--HGLLRV 183
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
L ++G AL++ +EM N F V G ++V V G
Sbjct: 184 LLKSGRAGDALHVLDEMPQANSGFSVTG-------------------EIVFGELVRSGRS 224
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
+ + E L+ ++ ++GV P+ ++ +LC + K A +L ++++G +A
Sbjct: 225 FPD--GEVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAA 282
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
N L+ + R EL ME +V ++ IL+N CK + I+ AL ++ +
Sbjct: 283 SCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRL 342
Query: 312 LSK------GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV-AADTWTYRTFIDG 364
K G++PDVV++NTL L ++ + E L +EM+ + +T TY IDG
Sbjct: 343 RGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDG 402
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
K A ELFR + + ++ N L+DGL
Sbjct: 403 FFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGL 438
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 43/101 (42%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF M + PP +NIL L +N D +SL + + + P+ TYN ++
Sbjct: 625 IFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGV 684
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRI 103
+ F ++ R++ P+ +T L + L A I
Sbjct: 685 RDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEI 725
>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 188/417 (45%), Gaps = 58/417 (13%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPD-------------- 51
+ LN+R S ++N+L L K +D +F+ + S G+ P+
Sbjct: 95 FKLNIRHS---FWTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEK 151
Query: 52 ----------LYTY---------NILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTS 92
L +Y N L+N K+ RV + LR + TF
Sbjct: 152 GKLHCATALLLQSYEVEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNI 211
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN 152
LI+GLC + +A L + FGC P++ TYNTLI G ++ A +F+++ S +
Sbjct: 212 LIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSS 271
Query: 153 GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
G +PDVVTYTS+I G+C A EA LL +M+ G+
Sbjct: 272 G----------------------CSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIY 309
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
P VTFNV++D K G+M A + MI G P+ + +L+DG+C G+VN+ L
Sbjct: 310 PTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRL 369
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
+ M + G F+YSILIN CK + A L G++ SK I P +YN + +
Sbjct: 370 WEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCK 429
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
+V A + +EM++ D T+ I G C + EAV +F + + C D
Sbjct: 430 AGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 486
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 192/417 (46%), Gaps = 33/417 (7%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
FC LN P SF ++ L N H F R + +TYN+L
Sbjct: 60 FCYLSKNLN------PFISFEVVKK-LDNNPHIGFRFWEFSRFK-LNIRHSFWTYNLLTR 111
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK G + + +PN+ L+ + ++ A AL L+ + E
Sbjct: 112 SLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALL--LQSYEVEG 169
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEE---MASGN----------GEFGVEGFVDKAKEL 167
N+L+N L + A+ LFEE S N G GV G +KA EL
Sbjct: 170 CCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGV-GKAEKAVEL 228
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD-----QGVQPNVVTFNVIM 222
M PD+VTY ++I+GFC +N+ +A EM D G P+VVT+ ++
Sbjct: 229 LGGMSGFGCLPDIVTYNTLIKGFCKSNELKKAN----EMFDDVKSSSGCSPDVVTYTSMI 284
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
CK GKM EAS LLD M+++G+ P +N L+DG+ G ++ A+E+ M S GC
Sbjct: 285 SGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCF 344
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
V +++ LI+GYC+ ++ L+ EM ++G+ P+ Y+ L L + +++ +A +L
Sbjct: 345 PDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKAREL 404
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
++ + + Y IDG CK + EA+ + + KC+ D + LI G
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIG 461
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 165/344 (47%), Gaps = 28/344 (8%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+FNIL L + + L ++ G PD+ TYN LI FCK + + +
Sbjct: 208 TFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDV 267
Query: 79 LRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
S +P+ VT+TS+I G C ++ EA+ L + G P T+N L++G + G
Sbjct: 268 KSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAG- 326
Query: 138 TIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
EM + A+E+ +M PDVVT+TS+I G+C N
Sbjct: 327 ---------EMHT-------------AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVN 364
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
+ L EM +G+ PN T++++++ LCK ++ +A LL + + P F+YN ++
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVI 424
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
DGFC G+VN A + ME C +++ILI G+C + A+S++ +M++ G
Sbjct: 425 DGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCS 484
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQR----DGVAADTWT 357
PD + ++L L + + A+ L + DG +T T
Sbjct: 485 PDKITVSSLLSCLLKAGMAKEAYHLNQIAHKGQINDGAPLETKT 528
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 71/137 (51%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+N R P +++IL L K L +L S + P + YN +I+ FCK G+
Sbjct: 373 MNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGK 432
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V+ V++ + + P+ +TFT LI G C + R+ EA ++F K+ GC P+ T ++
Sbjct: 433 VNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSS 492
Query: 128 LINGLYRTGHTIVALNL 144
L++ L + G A +L
Sbjct: 493 LLSCLLKAGMAKEAYHL 509
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 186/410 (45%), Gaps = 13/410 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M R S+ + L K D + L GL P + TYN+L++
Sbjct: 207 VFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDAL 266
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK GRV F + GR+ + TP+ VTF LI GL R E + ++ G PN
Sbjct: 267 CKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNE 326
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
YN LI R GH AL LF+EM + EG +++A+ +
Sbjct: 327 VIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILED 386
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI-EMMDQGVQPNVVTFNVIMDELCKNG 229
M + + +V+ E+ + EM+ +G++PN M ELCK G
Sbjct: 387 MLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGG 446
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K EA + + G+ N N L+ G C + A ++ +M + G +Y+
Sbjct: 447 KHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYN 506
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
I+I G CK+ ++E A+ L+G+M +G KPD+ +NTL + ++E F L D+M+ +
Sbjct: 507 IMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTE 566
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G+ D +Y T IDG CK I +A E L + ++ YN LI G
Sbjct: 567 GLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGG 616
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 187/395 (47%), Gaps = 34/395 (8%)
Query: 10 MRPSPPPVCSFNILFGCLAK----NKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
MRP+ P ++ C+ + KH + V FK LN GL +L T N LI+ C+
Sbjct: 428 MRPNDP------LMTACMRELCKGGKHQEAVGIWFKTLNK-GLGVNLATSNALIHGLCEG 480
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
+ V+ +L +++T+ +I+G C +S++ EA L + G +P++FT+
Sbjct: 481 KYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTF 540
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
NTL+ H L EE L QMK E + PD+V+Y +
Sbjct: 541 NTLL-------HAYCNLGKMEETF----------------HLLDQMKTEGLQPDIVSYGT 577
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I G C A D +AK L E+MD+G++PNV +N ++ +NG + A ++ M G
Sbjct: 578 IIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNG 637
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
++P Y +LM C G V AK +F V Y+I+I GYCK ++ A+
Sbjct: 638 IQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAV 697
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
+ + EM S+GI P+ + Y TL + E A KLFDEM GV D TY T I
Sbjct: 698 AYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARC 757
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + + + + L D R YN L +G+
Sbjct: 758 SEVNSLDKDIGHTAELSSGALTKDDRMYNILSNGI 792
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 134/278 (48%), Gaps = 24/278 (8%)
Query: 99 AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE 158
A+ + AA F L G P++ T N + L R G
Sbjct: 162 AQGSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQ--------------------- 200
Query: 159 GFVDKAKELFLQMKD-ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
+D A+E+F +M++ N+ + +YT++I+ C A + +L E+ G+QP VVT
Sbjct: 201 --LDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVT 258
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
+NV+MD LCK+G+++EA RL M Q G+ P+ + L++G R + ME
Sbjct: 259 YNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEME 318
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
+G + Y+ LI +C+ AL L+ EM+ K +KP V YN + L + ++E
Sbjct: 319 QLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEME 378
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
RA ++ ++M G+ + T + L + + +E+V
Sbjct: 379 RAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESV 416
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 90/196 (45%), Gaps = 1/196 (0%)
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI-GVRPNAFVYNTLMDGFCLTG 264
+ +G P++ T N ++ L + G++D A + D M + V N + Y ++ C G
Sbjct: 176 LSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAG 235
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
+V+ E+ + G TV +Y++L++ CK+ +E A L G M G+ P VV +
Sbjct: 236 KVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFG 295
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
L L + + EM++ GV+ + Y I C+ + +A+ LF + +
Sbjct: 296 ILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLK 355
Query: 385 KCELDIRAYNCLIDGL 400
K + YN + L
Sbjct: 356 KMKPTAVTYNLIAKAL 371
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 179/375 (47%), Gaps = 31/375 (8%)
Query: 26 CLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFT 84
CLA + L + + G+ P YN ++ CK G+V V+ +
Sbjct: 29 CLAG--ELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACK 86
Query: 85 PNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNL 144
P+ VTF +LI GLC R+ EA + ++ G N+ TYNTLINGL G
Sbjct: 87 PDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAG-------- 138
Query: 145 FEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
++ E L M+ PD TY ++I GFC + + + A L
Sbjct: 139 ------------------RSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLE 180
Query: 205 EMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI-QIGVRPNAFVYNTLMDGFCL 262
EM + G P+ T++++++ LCK+ + +A LL MI + + +NTL+DG+C
Sbjct: 181 EMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCK 240
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
++RA+EL SM GC V +YS +I+G C+ +++ +L +M+S+G KPDVV
Sbjct: 241 AQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVT 300
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
Y L L + ++ A +L M DG + TY DGLCK + A +L ++R
Sbjct: 301 YTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIR 360
Query: 383 ILKCELDIRAYNCLI 397
D+ A+ L+
Sbjct: 361 DKGRITDVVAFEALL 375
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 166/353 (47%), Gaps = 29/353 (8%)
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
D YTY +L+ C G + +L + + P + + LC ++ EA +
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL 169
++ C+P+V T+NTLI GL + G +D+A+++
Sbjct: 77 VKNMKDGACKPDVVTFNTLIAGLCKAGR-----------------------LDEAQQVLD 113
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M+ ++VTY ++I G A EA ++ M P+ T+N I+ CK+G
Sbjct: 114 EMERSGFAANLVTYNTLINGLSSAGRSGEA---VLVMQGMTTTPDTQTYNAIIHGFCKSG 170
Query: 230 KMDEASRLLDLMIQ-IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMGCTHTVFS 287
++D A L+ M Q G P+ F Y+ L++G C + + +A EL M C +V +
Sbjct: 171 EIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVA 230
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
++ L++GYCK ++++ A L ML G PDVV Y+T+ L V++ F L ++M
Sbjct: 231 FNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMV 290
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G D TY + GLCK +VEA L + + C + Y+ + DGL
Sbjct: 291 SRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGL 343
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 159/342 (46%), Gaps = 20/342 (5%)
Query: 4 FDYMLNMRPSP---PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
D + M P P +N L K+ + + K + PD+ T+N LI
Sbjct: 38 MDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIA 97
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK GR+ VL + RS F N VT+ +LI GL + R EA + + P
Sbjct: 98 GLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTT---TP 154
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNG--------EFGVEGF-----VDKAKEL 167
+ TYN +I+G ++G A EEM G + G + KA EL
Sbjct: 155 DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADEL 214
Query: 168 FLQM-KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
+M ++ VV + +++ G+C A D + A+ LL M++ G P+VVT++ I+D LC
Sbjct: 215 LQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLC 274
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
+ G +D+ LL+ M+ G +P+ Y L+ G C G++ A L M GCT
Sbjct: 275 RCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAV 334
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
+YS++ +G CK +++ A L + KG DVV + L +
Sbjct: 335 TYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALLL 376
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 172/386 (44%), Gaps = 26/386 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S N L L K D F+ + PD+YT+N +I+ C++G++ V
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAES---RIMEAAALFTKLRVFGCEPNVFTYNTLING 131
I P+ T+ SLI G C + + L ++ G P T+ LING
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
+ +T A+ +FEEM K + I VVTY S+I G C
Sbjct: 274 YCKNSNTAAAVRVFEEM-----------------------KQQGIAASVVTYNSLISGLC 310
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
E L+ EM D G+ PN +TF ++ CK G M +A+ +D M + V P+
Sbjct: 311 SEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVV 370
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
+YN L+D + G++ A + +M G + V +Y+ LI G+ ++ + A L EM
Sbjct: 371 IYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEM 430
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
KGI+ DVV YN L L +V +A KL DEM G+ + TY T I G C I
Sbjct: 431 KEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNI 490
Query: 372 VEAVELFRTLRILKCELDIRAYNCLI 397
A E+ + + ++ YN I
Sbjct: 491 KSAYEIRTRMEKCRKRANVVTYNVFI 516
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 178/379 (46%), Gaps = 51/379 (13%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F L R SP + +FN + L + + K + + GL P + TYN LI+ +C
Sbjct: 179 FRSALRRRVSPD-IYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYC 237
Query: 64 KMGRVS---HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
K G H ++L ++ + +P AVTF LI G C S A +F +++ G
Sbjct: 238 KKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAA 297
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEM-----ASGNGEFG--VEGFVDK-----AKELF 168
+V TYN+LI+GL G + L EEM + FG ++GF K A +
Sbjct: 298 SVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWI 357
Query: 169 LQMKDENINPDVV-----------------------------------TYTSVIRGFCYA 193
M + N+ PDVV TY +I GF +
Sbjct: 358 DGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRS 417
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
DW A LL EM ++G++ +VVT+NV++ LC G++ +A +LLD M ++G+ PN Y
Sbjct: 418 GDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTY 477
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
NT++ GFC G + A E+ ME V +Y++ I +C+ +++ A L EML
Sbjct: 478 NTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLD 537
Query: 314 KGIKPDVVIYNTLFVVLFE 332
K + P+ + Y T+ + E
Sbjct: 538 KCLVPNGITYETIKEGMME 556
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 146/319 (45%), Gaps = 26/319 (8%)
Query: 85 PNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNL 144
P+ + +L+ GL R+ A F P+++T+NT+I+GL R G
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQ------- 206
Query: 145 FEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY---ANDWNEAKC 201
+ KA ++ +K + P V TY S+I G+C A +
Sbjct: 207 ----------------LRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDM 250
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
LL EM++ G+ P VTF V+++ CKN A R+ + M Q G+ + YN+L+ G C
Sbjct: 251 LLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLC 310
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
G+V +L ME +G + ++ ++ G+CK + A M + ++PDVV
Sbjct: 311 SEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVV 370
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
IYN L V + ++E A + + M + G++ + TY I G ++ A L +
Sbjct: 371 IYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEM 430
Query: 382 RILKCELDIRAYNCLIDGL 400
+ E D+ YN LI L
Sbjct: 431 KEKGIEADVVTYNVLIGAL 449
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 132/311 (42%), Gaps = 47/311 (15%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F +L KN + + +F+ + G+ + TYN LI+ C G+V G +
Sbjct: 262 PTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKL 321
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAES--------------------------------- 101
+ + +PN +TF ++KG C +
Sbjct: 322 MEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRR 381
Query: 102 --RIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV-- 157
++ +A A+ + G PNV TYN LI G R+G A L +EM E V
Sbjct: 382 LGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVT 441
Query: 158 ----------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
+G V KA +L +M + + P+ +TY ++I+GFC + A + M
Sbjct: 442 YNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRME 501
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+ NVVT+NV + C+ GKMDEA+ LL+ M+ + PN Y T+ +G G
Sbjct: 502 KCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTP 561
Query: 268 RAKELFVSMES 278
+ VS S
Sbjct: 562 DIRGCTVSQAS 572
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 97/194 (50%), Gaps = 9/194 (4%)
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
+P+ + N ++ L ++D A + ++ V P+ + +NT++ G C G++ +A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY------GEMLSKGIKPDVVIYNT 325
+ +++ G +V +Y+ LI+GYCK GA ++Y EM+ GI P V +
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKG---GAGNMYHVDMLLKEMVEAGISPTAVTFGV 269
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L + A ++F+EM++ G+AA TY + I GLC + E V+L + L
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329
Query: 386 CELDIRAYNCLIDG 399
+ + C++ G
Sbjct: 330 LSPNEITFGCVLKG 343
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/382 (31%), Positives = 188/382 (49%), Gaps = 23/382 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S+ L L K+ L +++R+ S G+ P L TY+ L+ K + +L +
Sbjct: 194 SYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEM 253
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PN TFT I+ L +I EA + ++ GC P+V TY LI+ L G
Sbjct: 254 ESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGK- 312
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
++ AKELFL+MK + PD VTY +++ F D +
Sbjct: 313 ----------------------LNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDA 350
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
K EM G P+VVTF +++D LCK GK+DEA LD+M + GV PN YNTL+
Sbjct: 351 IKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLIC 410
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G R++ A ELF SMES+G T ++Y + I+ Y K+ E A+ + +M + GI P
Sbjct: 411 GLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVP 470
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
++V N L E ++E A + F+ +++ G+A D TY + K + +A++L
Sbjct: 471 NIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLL 530
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
+ C+ ++ N LID L
Sbjct: 531 SEMEENGCDPEVVIINSLIDTL 552
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 188/382 (49%), Gaps = 17/382 (4%)
Query: 8 LNMRPSP--PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
L M+ S P ++ L + + D + + + + G PD+ T+ ILI+ CK+
Sbjct: 321 LKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKV 380
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
G+V F L + + PN T+ +LI GL +R+ EA LF + G E +TY
Sbjct: 381 GKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTY 440
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMK 172
I+ ++G + A+ FE+M + NG +G +++AKE F +K
Sbjct: 441 ILFIDYYGKSGESGKAIKTFEKMKT-NGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLK 499
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 232
+ PD +TY ++R + A ++A LL EM + G P VV N ++D L K ++D
Sbjct: 500 KCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVD 559
Query: 233 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
EA ++ M ++ + P YNTL+ G GRV A LF M + C S++ L+
Sbjct: 560 EAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLL 619
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
+ CKN E++ AL + M PDV+ YNT+ L + ++V AF LF +M++ +
Sbjct: 620 DCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKK-VIY 678
Query: 353 ADTWTYRTFIDGLCKNSYIVEA 374
D T T + G+ K+ I +A
Sbjct: 679 PDYVTLCTLLPGVIKDGRIEDA 700
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 192/421 (45%), Gaps = 58/421 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +++ L L K + +TV+ L + + S GL P++YT+ I I + G++ + +
Sbjct: 225 PSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGI 284
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R+ + P+ VT+T LI LC ++ A LF K++ +P+ TY TL++
Sbjct: 285 LKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLD---- 340
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+F G +D KE + +M+ + PDVVT+T +I C
Sbjct: 341 -------------------KFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVG 381
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+EA L M QGV PN+ T+N ++ L + ++DEA L + M +G+ A+ Y
Sbjct: 382 KVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYI 441
Query: 255 TLMD-----------------------------------GFCLTGRVNRAKELFVSMESM 279
+D GR+ AKE F ++
Sbjct: 442 LFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKC 501
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G +Y+IL+ Y K ++ A+ L EM G P+VVI N+L L++ +V+ A
Sbjct: 502 GLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEA 561
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+K+F M+ +A TY T + GL K + EA LF+ + C + ++N L+D
Sbjct: 562 WKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDC 621
Query: 400 L 400
L
Sbjct: 622 L 622
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 178/343 (51%), Gaps = 15/343 (4%)
Query: 58 LINCFCKMGRVSHGFVVLGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAA-ALFTKLRV 115
L+ CK G+ + V ++ +S C TP+ + SLI GL ++R+ E A LF K++
Sbjct: 758 LVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLL-KARLTEMAWGLFYKMKN 816
Query: 116 FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE----------FGV--EGFVDK 163
GC P+VFTYN ++ L ++G +L+EEM + FG+ +DK
Sbjct: 817 AGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDK 876
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
A +L+ + + +P TY +I G EAK EM+D G PN +N++M+
Sbjct: 877 AIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMN 936
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
K G ++ A L M++ G+RP+ Y+ ++D C+ G+V+ A F ++ G
Sbjct: 937 GFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDP 996
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
+ Y+++ING +++ +E ALSL+ EM ++GI PD+ YN L + L VE A K++
Sbjct: 997 DLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMY 1056
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
+E+Q G+ + +TY I G + A +++ + + C
Sbjct: 1057 EELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGC 1099
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 185/422 (43%), Gaps = 50/422 (11%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
L +RP+ + +F I L + D + KR++ G PD+ TY +LI+ C G+
Sbjct: 256 LGLRPN---IYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGK 312
Query: 68 VSHGFVVLGRILRSC-----------------------------------FTPNAVTFTS 92
+++ + ++ S + P+ VTFT
Sbjct: 313 LNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTI 372
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN 152
LI LC ++ EA ++ G PN+ TYNTLI GL R AL LF M S
Sbjct: 373 LIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLG 432
Query: 153 GE------------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
E +G G KA + F +MK I P++V + + EAK
Sbjct: 433 LETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAK 492
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
+ G+ P+ +T+N++M K G++D+A +LL M + G P + N+L+D
Sbjct: 493 EFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTL 552
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
RV+ A ++F M+ M TV +Y+ L+ G K ++ A +L+ M++ P+
Sbjct: 553 YKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNT 612
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
+ +NTL L + +V+ A K+ M D TY T I GL K + + A LF
Sbjct: 613 ISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQ 672
Query: 381 LR 382
++
Sbjct: 673 MK 674
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 190/437 (43%), Gaps = 58/437 (13%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP SFN L CL KN D L + R+ FPD+ TYN +I K RV++ F
Sbjct: 609 PPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFW 668
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK-LRVFGCEPNVFTYNTLINGL 132
+ + ++ P+ VT +L+ G+ + RI +A + + + G + + L+ G+
Sbjct: 669 LFHQ-MKKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGI 727
Query: 133 Y---RTGHTIVALNLFEEMASGNGE-------------FGVEGFVDKAKELFLQM-KDEN 175
G +I LF E N G A +FL++ K
Sbjct: 728 LIEAEIGQSI----LFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFC 783
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
I P + Y S+I G A A L +M + G P+V T+N+ +D L K+GK+ E
Sbjct: 784 ITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELF 843
Query: 236 RLLDLMIQIGVRPNA-----------------------------------FVYNTLMDGF 260
L + M+ G +PN + Y L+DG
Sbjct: 844 DLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGL 903
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
GR+ AK+ F M GC Y+IL+NG+ K ++E A L+ M+ +GI+PD+
Sbjct: 904 LKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDL 963
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
Y+ + L + +V+ A F+E++ G+ D Y I+GL ++ + EA+ LF
Sbjct: 964 KSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDE 1023
Query: 381 LRILKCELDIRAYNCLI 397
+R D+ YN LI
Sbjct: 1024 MRNRGITPDLYTYNALI 1040
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 161/325 (49%), Gaps = 14/325 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N L L K + + LF ++ + G PD++TYN+ ++ K G++ F +
Sbjct: 786 PSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDL 845
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+L PN +T +I GL + + +A L+ L P +TY LI+GL +
Sbjct: 846 YEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLK 905
Query: 135 TGHTIVALNLFEEMAS-------------GNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G A FEEM NG FG +G V+ A ELF +M E I PD+
Sbjct: 906 LGRLEEAKQFFEEMLDYGCMPNCPLYNILMNG-FGKQGDVETACELFRRMVKEGIRPDLK 964
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+Y+ ++ C ++A E+ G+ P++V +N++++ L ++ +++EA L D M
Sbjct: 965 SYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEM 1024
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
G+ P+ + YN L+ + G V A +++ ++ G VF+Y+ LI G+ +
Sbjct: 1025 RNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNP 1084
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTL 326
+ A ++Y +M+ G +P+ + L
Sbjct: 1085 DRAYAVYKKMMVGGCRPNTGTFAQL 1109
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 132/293 (45%), Gaps = 24/293 (8%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +++ ML R P + NI+ L K+ D + L+ L S P +TY LI+
Sbjct: 843 FDLYEEML-FRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLID 901
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
K+GR+ +L PN + L+ G + + A LF ++ G P
Sbjct: 902 GLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRP 961
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
++ +Y+ +++ L G AL+ FEE +K ++PD+
Sbjct: 962 DLKSYSIMVDCLCMVGKVDDALHYFEE-----------------------LKLSGLDPDL 998
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
V Y +I G + EA L EM ++G+ P++ T+N ++ L G ++EA ++ +
Sbjct: 999 VCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEE 1058
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
+ G+ PN F YN L+ G ++G +RA ++ M GC +++ L N
Sbjct: 1059 LQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQLPN 1111
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 88/193 (45%)
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M Q ++ ++ T+ I L G + EA L+ M ++G N + Y L+ +G
Sbjct: 148 MQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGF 207
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
A +++ M S G ++ +YS L+ K ++IE + L EM S G++P++ +
Sbjct: 208 CREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTI 267
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
+L +++ A+ + M G D TY ID LC + A ELF ++
Sbjct: 268 CIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASS 327
Query: 386 CELDIRAYNCLID 398
+ D Y L+D
Sbjct: 328 HKPDRVTYITLLD 340
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 128/335 (38%), Gaps = 47/335 (14%)
Query: 104 MEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDK 163
M + ++ L+ F++ + + R HT N EM + V+
Sbjct: 87 MSSEEVYRVLKSISDPNQAFSFFNSVAEMPRVIHTTETCNYVLEMLRAHRR------VED 140
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
+F M+ + I + TY ++ + EA L +M G N ++ ++
Sbjct: 141 MVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIH 200
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
L K+G EA ++ M+ G++P+ Y+ LM + L MES+G
Sbjct: 201 LLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRP 260
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
+++++I I + +I+ A + M G PDVV Y L L ++ A +LF
Sbjct: 261 NIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELF 320
Query: 344 -----------------------------------DEMQRDGVAADTWTYRTFIDGLCKN 368
EM+ DG D T+ ID LCK
Sbjct: 321 LKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKV 380
Query: 369 SYIVEAVELFRTLRILKCE---LDIRAYNCLIDGL 400
+ EA F TL ++K + ++ YN LI GL
Sbjct: 381 GKVDEA---FGTLDVMKKQGVAPNLHTYNTLICGL 412
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 188/379 (49%), Gaps = 21/379 (5%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
++L A N ++ FKR G + L+ K R + V ++R
Sbjct: 157 DMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIR 216
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
PN TF +I LC ++ +A + ++V+GC PNV +YNTLI+G + G
Sbjct: 217 RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLG---- 272
Query: 141 ALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
GNG+ + KA + +M + +++P++ T+ +I GF ++ +
Sbjct: 273 ----------GNGK------MYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSM 316
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
+ EM+DQ V+PNV+++N +++ LC GK+ EA + D M+ GV+PN YN L++GF
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
C + A ++F S++ G T Y++LI+ YCK +I+ +L EM +GI PDV
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
YN L L +E A KLFD++ G+ D T+ ++G C+ +A L +
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKE 495
Query: 381 LRILKCELDIRAYNCLIDG 399
+ + + YN ++ G
Sbjct: 496 MSKMGLKPRHLTYNIVMKG 514
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 191/382 (50%), Gaps = 29/382 (7%)
Query: 22 ILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRS 81
++ L +N+ D V ++K + + P+++T+N++IN CK G+++ V+ +
Sbjct: 194 LMIALLKENRSAD-VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVY 252
Query: 82 CFTPNAVTFTSLIKGLC---AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+PN V++ +LI G C ++ +A A+ ++ PN+ T+N LI+G ++ +
Sbjct: 253 GCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNL 312
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
++ +F+EM D+++ P+V++Y S+I G C +E
Sbjct: 313 PGSMKVFKEML-----------------------DQDVKPNVISYNSLINGLCNGGKISE 349
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A + +M+ GVQPN++T+N +++ CKN + EA + + G P +YN L+D
Sbjct: 350 AISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLID 409
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
+C G+++ L ME G V +Y+ LI G C+N IE A L+ ++ SKG+ P
Sbjct: 410 AYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-P 468
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
D+V ++ L + +A L EM + G+ TY + G CK + A +
Sbjct: 469 DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMR 528
Query: 379 RTL-RILKCELDIRAYNCLIDG 399
+ + + +++ +YN L+ G
Sbjct: 529 TQMEKERRLRMNVASYNVLLQG 550
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 162/328 (49%), Gaps = 23/328 (7%)
Query: 15 PPVCSFNILFGC---LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P V S+N L L N ++ K + + P+L T+NILI+ F K +
Sbjct: 256 PNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGS 315
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
V +L PN +++ SLI GLC +I EA ++ K+ G +PN+ TYN LING
Sbjct: 316 MKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALING 375
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVE---------------GFVDKAKELFLQMKDENI 176
+ AL++F S G+ V G +D L +M+ E I
Sbjct: 376 FCKNDMLKEALDMF---GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI 432
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
PDV TY +I G C + AK L ++ +G+ P++VTF+++M+ C+ G+ +A+
Sbjct: 433 VPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAM 491
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES-MGCTHTVFSYSILINGY 295
LL M ++G++P YN +M G+C G + A + ME V SY++L+ GY
Sbjct: 492 LLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGY 551
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIY 323
+ ++E A L EML KG+ P+ + Y
Sbjct: 552 SQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 182/377 (48%), Gaps = 17/377 (4%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG---R 67
R P V +FN++ L K + + + + G P++ +YN LI+ +CK+G +
Sbjct: 217 RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGK 276
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ VL ++ + +PN TF LI G + + + +F ++ +PNV +YN+
Sbjct: 277 MYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNS 336
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFG-------VEGF-----VDKAKELFLQMKDEN 175
LINGL G A+++ ++M S + + GF + +A ++F +K +
Sbjct: 337 LINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQG 396
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
P Y +I +C ++ L EM +G+ P+V T+N ++ LC+NG ++ A
Sbjct: 397 AVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAK 456
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+L D + G+ P+ ++ LM+G+C G +A L M MG +Y+I++ GY
Sbjct: 457 KLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGY 515
Query: 296 CKNKEIEGALSLYGEM-LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
CK ++ A ++ +M + ++ +V YN L + ++E A L +EM G+ +
Sbjct: 516 CKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575
Query: 355 TWTYRTFIDGLCKNSYI 371
TY + + ++
Sbjct: 576 RITYEIVKEEMVDQGFV 592
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 147/319 (46%), Gaps = 30/319 (9%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +FNIL K+ + + +FK + + P++ +YN LIN C G++S +
Sbjct: 294 PNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISM 353
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ + PN +T+ +LI G C + EA +F ++ G P YN LI+ +
Sbjct: 354 RDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCK 413
Query: 135 TGHTIVALNLFEEMASGN-----GEFGV-------EGFVDKAKELFLQMKDENINPDVVT 182
G L EEM G + G ++ AK+LF Q+ + + PD+VT
Sbjct: 414 LGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVT 472
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM- 241
+ ++ G+C + +A LL EM G++P +T+N++M CK G + A+ + M
Sbjct: 473 FHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQME 532
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ +R N YN L+ G+ G++ A L M G +Y I+ KE
Sbjct: 533 KERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV-------KE- 584
Query: 302 EGALSLYGEMLSKGIKPDV 320
EM+ +G PD+
Sbjct: 585 --------EMVDQGFVPDI 595
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 118/237 (49%), Gaps = 3/237 (1%)
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
++ +M I P+V T+ VI C N+A+ ++ +M G PNVV++N ++D C
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 227 K---NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
K NGKM +A +L M++ V PN +N L+DGF + + ++F M
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
V SY+ LING C +I A+S+ +M+S G++P+++ YN L + ++ A +F
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++ G T Y ID CK I + L + D+ YNCLI GL
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGL 446
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 195/399 (48%), Gaps = 15/399 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++++L KN + + + + + G+ +Y+ N ++ + K + F +
Sbjct: 178 PNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTM 237
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L S N TF +L+ LC E ++ EA L+ ++ G PNV +YN +I G R
Sbjct: 238 FNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCR 296
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
+ A +++EM +G F +G ++ A +F +MKD NI P
Sbjct: 297 KDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFK-KGDIENAFSIFHRMKDANILPTDT 355
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
T +I+G C A E + L + + QG P + +N I+D K G ++ AS + M
Sbjct: 356 TLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREM 415
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++G+ P+ Y +L+DGFC ++ A +L M+ G + +Y LI+G+CK +++
Sbjct: 416 CEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDM 475
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A L E+ G+ P+ IYN++ ++ VE A L+ +M +G+ D TY +
Sbjct: 476 KSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSL 535
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
IDGL K+ ++ A ++ + D RA+ LI+GL
Sbjct: 536 IDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGL 574
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 199/433 (45%), Gaps = 48/433 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
PP +F + K + L L + + G +L L+ +C G + V+
Sbjct: 108 PPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVL 167
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ I S PN VT++ LI G C I +A +++++ G +V++ N+++ G +
Sbjct: 168 VNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLK 227
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
A +F + A +G V EG +++A L+ ++ + I+P+VV+
Sbjct: 228 CQSWQNAFTMFND-ALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVS 286
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD------------------- 223
Y ++I G C ++ N A + EM+D G PN VTF ++MD
Sbjct: 287 YNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMK 346
Query: 224 ----------------ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
LCK G+ E L + + G P YNT++DGF G +N
Sbjct: 347 DANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNIN 406
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A ++ M +G T + +Y+ LI+G+CK I+ AL L +M KG+K D+ Y TL
Sbjct: 407 LASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLI 466
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
+ ++ A +L +E++ G++ + + Y + I G + + EA++L++ +
Sbjct: 467 DGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIP 526
Query: 388 LDIRAYNCLIDGL 400
D++ Y LIDGL
Sbjct: 527 CDLKTYTSLIDGL 539
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 179/378 (47%), Gaps = 21/378 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
++D ++ SP V NI+ G K+ + + ++K + G P+ T+ IL++ +
Sbjct: 271 LWDEVIAKGISPNVVSYNNIILGHCRKD-NINAACKVYKEMLDNGFTPNAVTFTILMDGY 329
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K G + + F + R+ + P T +IKGLC R E LF K G P
Sbjct: 330 FKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTC 389
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV-----------EGF-----VDKAKE 166
YNT+I+G + G+ +A N++ EM E G+ +GF +D A +
Sbjct: 390 MPYNTIIDGFIKEGNINLASNVYREMC----EVGITPSTVTYTSLIDGFCKGNNIDLALK 445
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
L MK + + D+ Y ++I GFC D A LL E+ G+ PN +N ++
Sbjct: 446 LLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFK 505
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
++EA L M+ G+ + Y +L+DG +GR+ A ++ M S G
Sbjct: 506 NMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDR 565
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
++++LING C + E A + +M K + P V+IYNTL F+ ++ AF+L DEM
Sbjct: 566 AHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEM 625
Query: 347 QRDGVAADTWTYRTFIDG 364
G+ D TY ++G
Sbjct: 626 LDRGLVPDNITYDILVNG 643
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 181/409 (44%), Gaps = 61/409 (14%)
Query: 26 CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTP 85
CL N Y LSL + + + G P T+ +I K G V+ + ++ +
Sbjct: 86 CLKPNSGY--ALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSM 143
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
N TSL+KG C + + A L ++ G PN TY+ LI+G + G+
Sbjct: 144 NLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGN-------- 195
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
++KA E + +MK + I V + S++ G+ W A + +
Sbjct: 196 ---------------IEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 240
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
++ G+ NV TFN ++ LCK GKM+EA L D +I G+ PN YN ++ G C
Sbjct: 241 ALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDN 299
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM-------------- 311
+N A +++ M G T +++IL++GY K +IE A S++ M
Sbjct: 300 INAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGI 359
Query: 312 ---------------------LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+S+G P + YNT+ + + A ++ EM G
Sbjct: 360 IIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVG 419
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ T TY + IDG CK + I A++L ++ ++DI+AY LIDG
Sbjct: 420 ITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDG 468
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 137/317 (43%), Gaps = 24/317 (7%)
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
TP+ L+ + ++ EA L K+ + G + FT + ++ +
Sbjct: 1 MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLK-------- 52
Query: 143 NLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
EG + +A++ FLQ K + D Y+ + C + A L
Sbjct: 53 ---------------EGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSL 97
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
L EM G P TF ++ K G + EA RL D M+ G N V +LM G+C+
Sbjct: 98 LREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCM 157
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G + A L + G +YS+LI+G CKN IE A Y EM +KGI+ V
Sbjct: 158 QGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYS 217
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
N++ + + AF +F++ G+ A+ +T+ T + LCK + EA L+ +
Sbjct: 218 LNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVI 276
Query: 383 ILKCELDIRAYNCLIDG 399
++ +YN +I G
Sbjct: 277 AKGISPNVVSYNNIILG 293
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 194/434 (44%), Gaps = 48/434 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L + +L R+ G+ P TYN L++ + ++G + V
Sbjct: 242 PDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDV 301
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPNVFTYNTLINGLY 133
+ + F P+ T+ L GLC ++ EA L ++ G P+V TYNTL++ +
Sbjct: 302 VEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACF 361
Query: 134 RTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVV 181
+ + ALNL EEM + + EG +++A M +E + PDV+
Sbjct: 362 KCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVI 421
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL--- 238
TY ++I C A + +A L+ EM+ G++ + T N ++ LCK + +EA LL
Sbjct: 422 TYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAP 481
Query: 239 --------------------------------DLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
D MI+ + P+ YNTL+ G G++
Sbjct: 482 PQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKL 541
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
A + + MG +Y+I+I+ YCK ++E A + +M+ KPDVV NTL
Sbjct: 542 TEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTL 601
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
L ++E+A KLF+ G D TY T I LCK++ + A+ F + +
Sbjct: 602 MNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGL 661
Query: 387 ELDIRAYNCLIDGL 400
+ D+ YN L+ L
Sbjct: 662 QPDVFTYNVLLSAL 675
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 194/402 (48%), Gaps = 23/402 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSL--FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
P + + N + LA++ SL F L + L P+ YT+N+L++ C G ++
Sbjct: 170 PSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADAL 229
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
L ++ +P+AVT+ +L+ C + + EA L +++ G P TYNTL++
Sbjct: 230 STLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAY 289
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVE----------------GFVDKAKELFLQMKDENI 176
R G A ++ E M + FG E G VD+A +L +M+ I
Sbjct: 290 ARLGWIKQATDVVEAMTA----FGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGI 345
Query: 177 -NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+PDVVTY +++ ++A LL EM ++GV+ ++VT N+I+ LC+ G+++EA
Sbjct: 346 VSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEAL 405
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
L++M + G+ P+ YNTL+D C G V +A L M G F+ + L+
Sbjct: 406 GRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNL 465
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
CK K E A L +G PD V Y T+ F+ ++ E A L+DEM + +
Sbjct: 466 CKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSI 525
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
TY T I GL + EA++ L + D YN +I
Sbjct: 526 STYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIII 567
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 170/360 (47%), Gaps = 30/360 (8%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ + NI+ L + + L + + GL PD+ TYN LI+ CK G V+ FV++
Sbjct: 385 LVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMD 444
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++RS + T +L+ LC E R EA L G P+ +Y T++ ++
Sbjct: 445 EMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEY 504
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
AL L++EM + P + TY ++I+G
Sbjct: 505 KPEPALCLWDEMIK-----------------------RKLTPSISTYNTLIKGLSTMGKL 541
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
EA L E+M+ G+ P+ T+N+I+ CK G +++A + + M++ +P+ NTL
Sbjct: 542 TEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTL 601
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
M+G CL GR+ +A +LF S G V +Y+ LI CK+ +++ AL + +M +G+
Sbjct: 602 MNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGL 661
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+PDV YN L L E + A K+ ++ G Y F K+S VEAVE
Sbjct: 662 QPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGK-----LYGRFFYPSIKSS--VEAVE 714
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 122/296 (41%), Gaps = 60/296 (20%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
C++D M+ R P + ++N L L+ + L GL PD TYNI+I+
Sbjct: 510 LCLWDEMIK-RKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIH 568
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+CK G + F +++ + F P+ VT +L+ GLC R+ +A LF G +
Sbjct: 569 AYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKV 628
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
+V TYNTLI L + + VD A F M+ + PDV
Sbjct: 629 DVITYNTLIQALCK-----------------------DNDVDTALRFFADMEVRGLQPDV 665
Query: 181 VTYTSVIRGFCYANDWNEAKCLL---------------------IEMMDQGVQPNVV--- 216
TY ++ A EA+ +L +E ++ G P V
Sbjct: 666 FTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDI 725
Query: 217 ------------TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
++N + ELC G++ EA +LD M+Q G+ + Y TLM+G
Sbjct: 726 ESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGL 781
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 3/170 (1%)
Query: 234 ASRLLDLMIQIG-VRPNAFVYNTLMDGFCLTGRVNRAKEL--FVSMESMGCTHTVFSYSI 290
A++LL + G VRP+ N ++ + + L F S+ ++ +++++
Sbjct: 155 AAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNL 214
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L++ +C + ALS +M G+ PD V YNTL + A L M+++G
Sbjct: 215 LVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEG 274
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ TY T + + +I +A ++ + E D+ YN L GL
Sbjct: 275 IVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGL 324
>gi|359488082|ref|XP_002266772.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Vitis vinifera]
Length = 498
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 181/387 (46%), Gaps = 25/387 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N+L G L K T + L ++ +G PD TYN ++ C G
Sbjct: 107 PDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQAIGF 166
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
LR +T+T LI+ +C ++A + + + GC P++ TYN+L+N +
Sbjct: 167 WKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCK 226
Query: 135 TG-HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
G + AL ++ ++ G G P+ VTY +++ C
Sbjct: 227 QGKYEDTALIIYNLLSHGMG------------------------PNTVTYNTLLHSLCTH 262
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
W+E +L+ M P VVT+N++++ LCK G +D A D M+ P+ Y
Sbjct: 263 GYWDEVDEILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITY 322
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
NTL+ C G V+ A L S+ C+ + +Y+I+I+G K +E A+ LYGEM+
Sbjct: 323 NTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIE 382
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+G PD + + TLF LF + VE A + EM + +R I GLCK +
Sbjct: 383 RGFAPDDITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCKKKKVDI 442
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A+++ + +C+ + Y+ +I G+
Sbjct: 443 AIQVLEMMVSSQCKPNEEIYSAIIKGV 469
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 148/333 (44%), Gaps = 23/333 (6%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P + ++ +L + K+ + + + + G +PD+ TYN L+N CK G+ +
Sbjct: 176 PAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDTAL 235
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
++ +L PN VT+ +L+ LC E + + P V TYN LINGL
Sbjct: 236 IIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILINGLC 295
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ G +D+A F QM N PD++TY +++ C
Sbjct: 296 KYG-----------------------LLDRAINFFDQMVSHNCLPDIITYNTLLAALCKE 332
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+EA LL + D P ++T+N+++D L K G M++A L MI+ G P+ +
Sbjct: 333 GMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITH 392
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
TL G V A + M ++ +I+G CK K+++ A+ + M+S
Sbjct: 393 RTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCKKKKVDIAIQVLEMMVS 452
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
KP+ IY+ + + +E A +L ++
Sbjct: 453 SQCKPNEEIYSAIIKGVGAAGMIEEANQLHQKL 485
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 110/243 (45%)
Query: 158 EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
+G + A L M N P + ++IRG A +L M+ G P+++T
Sbjct: 52 KGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIMVMSGGIPDIIT 111
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
+N+++ LCK G + A LLD M G P+A YNT++ G ++A +
Sbjct: 112 YNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQAIGFWKDQL 171
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
GC + +Y++LI CK+ A+ + +M +G PD+V YN+L + + E
Sbjct: 172 RKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYE 231
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ + G+ +T TY T + LC + Y E E+ + + YN LI
Sbjct: 232 DTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILI 291
Query: 398 DGL 400
+GL
Sbjct: 292 NGL 294
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 109/245 (44%), Gaps = 14/245 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L L + ++D V + +N+T P + TYNILIN CK G +
Sbjct: 247 PNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAINF 306
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ P+ +T+ +L+ LC E + EA L L C P + TYN +I+GL +
Sbjct: 307 FDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAK 366
Query: 135 TGHTIVALNLFEEMASGN-------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
G A+ L+ EM G F ++ V+ A + +M N
Sbjct: 367 KGCMEKAMELYGEMIERGFAPDDITHRTLFWGLFRLD-LVEDALVILKEMNKRNQRIKNS 425
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+ VI G C + A +L M+ +PN ++ I+ + G ++EA++L +
Sbjct: 426 AFRFVIHGLCKKKKVDIAIQVLEMMVSSQCKPNEEIYSAIIKGVGAAGMIEEANQLHQKL 485
Query: 242 IQIGV 246
++ V
Sbjct: 486 TELKV 490
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%)
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
T N I+ LC GK+ ASRL+D+M + P L+ G RA + M
Sbjct: 41 TNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIM 100
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
G + +Y++L+ G CK ++ A+ L EM G PD + YNT+ +F+
Sbjct: 101 VMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGF 160
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
++A + + R G A TY I+ +CK+ V+A+E+ + I C DI YN L
Sbjct: 161 DQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSL 220
Query: 397 ID 398
++
Sbjct: 221 VN 222
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 12/208 (5%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++N PP V ++NIL L K D ++ F ++ S PD+ TYN L+ CK G
Sbjct: 274 IMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEG 333
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
V +L + + +P +T+ +I GL + + +A L+ ++ G P+ T+
Sbjct: 334 MVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHR 393
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDE 174
TL GL+R AL + +EM N F VD A ++ M
Sbjct: 394 TLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCKKKKVDIAIQVLEMMVSS 453
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCL 202
P+ Y+++I+G A EA L
Sbjct: 454 QCKPNEEIYSAIIKGVGAAGMIEEANQL 481
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/382 (30%), Positives = 187/382 (48%), Gaps = 23/382 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S+N L L ++ L +++R+ GL P L T++ L+ K +L +
Sbjct: 196 SYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEM 255
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PN T+T I+ L RI EA + ++ GC P+V TY LI+ L G
Sbjct: 256 ESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGK- 314
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+D A ELF++MK + PD VTY +++ F D
Sbjct: 315 ----------------------LDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGR 352
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
K EM G P+V+TF ++++ LCK G +DEA LLD+M + GV PN YNTL+
Sbjct: 353 VKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLIS 412
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G R++ A +LF +ME++G T ++Y + I+ Y K+ + AL + +M +GI P
Sbjct: 413 GLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAP 472
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
++V N L E+ ++ A +F+ ++ +G+A D+ TY + K + EA+EL
Sbjct: 473 NIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELL 532
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
+ +CE DI N LI+ L
Sbjct: 533 SDMSENQCEPDIIVINSLINTL 554
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 178/380 (46%), Gaps = 12/380 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ +L L D + LF ++ ++ PD TY +++ F G +
Sbjct: 297 PDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEF 356
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + P+ +TFT L+ LC I EA L +R G PN+ TYNTLI+GL R
Sbjct: 357 WSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLR 416
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
AL+LF M + +G G DKA E F +MK I P++V
Sbjct: 417 VNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVA 476
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ + EAK + + G+ P+ VT+N++M K G++DEA LL M
Sbjct: 477 CNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMS 536
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ P+ V N+L++ GRV+ A ++F ++ M TV +Y+ LI G K +++
Sbjct: 537 ENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQ 596
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ L+ M G P+ + +NT+ L + +V+ A K+ +M D T+ T I
Sbjct: 597 RAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTII 656
Query: 363 DGLCKNSYIVEAVELFRTLR 382
GL + +A+ LF ++
Sbjct: 657 HGLVIEKRVSDAIWLFHQMK 676
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 201/421 (47%), Gaps = 58/421 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +F+ L K + +TV SL + + S GL P++YTY I I + GR+ +
Sbjct: 227 PSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRI 286
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R+ P+ VT+T LI LC ++ +A LF K++ +P+ TY T+++
Sbjct: 287 MKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLD---- 342
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+F G + + KE + +M+ + PDV+T+T ++ C A
Sbjct: 343 -------------------KFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAG 383
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ +EA LL M QGV PN+ T+N ++ L + ++D+A L + M +GV P A+ Y
Sbjct: 384 NIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYI 443
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMG-------CTHTVFS-------------------- 287
+D + +GR ++A E F M+ G C +++S
Sbjct: 444 LFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSN 503
Query: 288 --------YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
Y++++ Y K +++ A+ L +M +PD+++ N+L L++ +V+ A
Sbjct: 504 GLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEA 563
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+K+F ++ +A TY T I GL K + A+ELF ++ C + +N ++D
Sbjct: 564 WKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDC 623
Query: 400 L 400
L
Sbjct: 624 L 624
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 188/378 (49%), Gaps = 14/378 (3%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 95
V + + + G PD+ T+ IL+N CK G + F +L + + PN T+ +LI
Sbjct: 353 VKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLIS 412
Query: 96 GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA------ 149
GL +R+ +A LF + G P +TY I+ ++G + AL FE+M
Sbjct: 413 GLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAP 472
Query: 150 ------SGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
+ G + +AK +F ++K + PD VTY +++ + A +EA LL
Sbjct: 473 NIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELL 532
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
+M + +P+++ N +++ L K G++DEA ++ + + + P YNTL+ G
Sbjct: 533 SDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKE 592
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
G+V RA ELF SM GC +++ +++ CKN E++ AL + +M + PDV+ +
Sbjct: 593 GQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTF 652
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT-LR 382
NT+ L +V A LF +M++ + D T T + G+ KN + +A ++ +
Sbjct: 653 NTIIHGLVIEKRVSDAIWLFHQMKK-MLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVH 711
Query: 383 ILKCELDIRAYNCLIDGL 400
L +D R + L+ G+
Sbjct: 712 RLGVYVDRRFWEDLMGGI 729
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 194/434 (44%), Gaps = 50/434 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG------RV 68
P V +FN + L K + LF ++ L PD T L+ K G ++
Sbjct: 647 PDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM-LTPDCVTLCTLLPGVVKNGLMEDAFKI 705
Query: 69 SHGFV--------------VLGRILRSCFTPNAVTF----------------TSLIKGLC 98
+ FV ++G IL T + F +IK LC
Sbjct: 706 AEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLC 765
Query: 99 AESRIMEAAALFTKL-RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN----- 152
+ + A ++F + + G +P + +YN LI G + +A NLF EM +
Sbjct: 766 KHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDV 825
Query: 153 -------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
G G +++ EL+ QM + P+ +T+ +I +N ++A L +
Sbjct: 826 FTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYD 885
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
++ P T+ ++D L K+G+++EA L + M+ G RPN +YN L++GF TG
Sbjct: 886 LVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGD 945
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
VN A ELF M G + SY+ L+ C+ ++ AL + ++ G+ D + YN
Sbjct: 946 VNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNL 1005
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
+ L H++E A L+DEMQ G+ D +TY + I L + +A +L+ L+ +
Sbjct: 1006 MIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIG 1065
Query: 386 CELDIRAYNCLIDG 399
E ++ YN LI G
Sbjct: 1066 LEPNVFTYNALIRG 1079
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 199/467 (42%), Gaps = 85/467 (18%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L K + LF + G P+ T+N +++C CK V +
Sbjct: 577 PTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKM 636
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+ +TF ++I GL E R+ +A LF +++ P+ T TL+ G+ +
Sbjct: 637 LYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM-LTPDCVTLCTLLPGVVK 695
Query: 135 TGHTIVALNLFEEMASGNG-----------------EFGVEG---FVDK----------- 163
G A + E+ G + G E F D+
Sbjct: 696 NGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGS 755
Query: 164 -----------------AKELFLQMKDE-NINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
A+ +F++ E + P + +Y +I GF ++ A L E
Sbjct: 756 VLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTE 815
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN----------- 254
M + G P+V T+N+++D K+GK++E L + MI +PN +N
Sbjct: 816 MKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNS 875
Query: 255 ------------------------TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
L+DG +GR+ AKELF M GC Y+I
Sbjct: 876 LDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNI 935
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LING+ K ++ A L+ M+ +GI+PD+ Y +L L E +V+ A F+++++ G
Sbjct: 936 LINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTG 995
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ D+ Y IDGL ++ I EA+ L+ ++ D+ YN LI
Sbjct: 996 LYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLI 1042
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 171/361 (47%), Gaps = 24/361 (6%)
Query: 27 LAKNKHYDTVLSLFKRLNST-GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTP 85
L K+K S+F R G+ P L +YN LI F + + + + + P
Sbjct: 764 LCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAP 823
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
+ T+ L+ +I E L+ ++ C+PN T+N +I L ++ AL+LF
Sbjct: 824 DVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLF 883
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
++ SG+ +P TY ++ G + EAK L E
Sbjct: 884 YDLVSGD-----------------------FSPTPCTYGPLLDGLLKSGRLEEAKELFEE 920
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M+D G +PN +N++++ K G ++ A L M++ G+RP+ Y +L+ C GR
Sbjct: 921 MVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGR 980
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
V+ A F ++ G +Y+++I+G ++ IE AL+LY EM S+GI PD+ YN+
Sbjct: 981 VDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNS 1040
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L + L VE+A KL++E+Q G+ + +TY I G + A +++ + +
Sbjct: 1041 LILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGG 1100
Query: 386 C 386
C
Sbjct: 1101 C 1101
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 188/411 (45%), Gaps = 23/411 (5%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ +R P + + N LA+ +F RL S GL PD TYN+++ C+ K G+
Sbjct: 465 MKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQ 524
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V +L + + P+ + SLI L R+ EA +F +L+ P V TYNT
Sbjct: 525 VDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNT 584
Query: 128 LINGLYRTGHTIVALNLFEEMASGNG------EFGV-------EGFVDKAKELFLQMKDE 174
LI GL + G A+ LF M +GNG F VD A ++ +M
Sbjct: 585 LIAGLGKEGQVQRAMELFASM-TGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTM 643
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
N PDV+T+ ++I G ++A L M + + P+ VT ++ + KNG M++A
Sbjct: 644 NCMPDVLTFNTIIHGLVIEKRVSDA-IWLFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDA 702
Query: 235 SRLL-DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL-- 291
++ D + ++GV + + LM G LT LF + + C S+L
Sbjct: 703 FKIAEDFVHRLGVYVDRRFWEDLMGGI-LTQAGTEKTILF--GDRLVCGRVCKDGSVLMP 759
Query: 292 -INGYCKNKEIEGALSLYGEMLSK-GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
I CK+K+ A S++ + G+KP + YN L +H E A+ LF EM+
Sbjct: 760 IIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNA 819
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G A D +TY +D K+ I E EL+ + C+ + +N +I L
Sbjct: 820 GCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANL 870
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 163/325 (50%), Gaps = 14/325 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S+N L + + +LF + + G PD++TYN+L++ K G+++ F +
Sbjct: 788 PTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFEL 847
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ S PN +T +I L + + +A LF L P TY L++GL +
Sbjct: 848 YEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLK 907
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
+G A LFEEM NG FG G V+ A ELF +M E I PD+
Sbjct: 908 SGRLEEAKELFEEMVDYGCRPNNAIYNILING-FGKTGDVNTACELFKRMVREGIRPDLK 966
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+YTS++ C A ++A ++ G+ + + +N+++D L ++ +++EA L D M
Sbjct: 967 SYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEM 1026
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
G+ P+ F YN+L+ + G V +A +L+ ++ +G VF+Y+ LI GY +
Sbjct: 1027 QSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNS 1086
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTL 326
+ A ++Y M+ G P+ + L
Sbjct: 1087 DSAYAVYKRMMVGGCSPNTGTFAQL 1111
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 12/291 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N+L K+ + + L++++ + P+ T+NI+I K + +
Sbjct: 823 PDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDL 882
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ F+P T+ L+ GL R+ EA LF ++ +GC PN YN LING +
Sbjct: 883 FYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGK 942
Query: 135 TGHTIVALNLFEEM------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TG A LF+ M S G G VD A F ++K + D +
Sbjct: 943 TGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIA 1002
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I G ++ EA L EM +G+ P++ T+N ++ L G +++A +L + +
Sbjct: 1003 YNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQ 1062
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
IG+ PN F YN L+ G+ ++G + A ++ M GC+ +++ L N
Sbjct: 1063 FIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQLPN 1113
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 117/244 (47%)
Query: 157 VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
+ G + + F +M++ + + +Y +I + EA + M+ +G++P++
Sbjct: 171 IRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLK 230
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
TF+ +M K + LL+ M +G++PN + Y + GR++ A + M
Sbjct: 231 TFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRM 290
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
E GC V +Y++LI+ C +++ A+ L+ +M + KPD V Y T+ + +
Sbjct: 291 EDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDL 350
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
R + + EM+ DG A D T+ ++ LCK I EA L +R ++ YN L
Sbjct: 351 GRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTL 410
Query: 397 IDGL 400
I GL
Sbjct: 411 ISGL 414
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%)
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M +Q ++ ++ T+ +I L G + + M + G NA+ YN L+ +G
Sbjct: 150 MQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGL 209
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
A E++ M G ++ ++S L+ K ++ E SL EM S G+KP++ Y
Sbjct: 210 CREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTI 269
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
VL +++ A ++ M+ DG D TY ID LC + +A+ELF ++
Sbjct: 270 CIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASS 329
Query: 386 CELDIRAYNCLID 398
+ D Y ++D
Sbjct: 330 HKPDRVTYITMLD 342
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 72/164 (43%)
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+ +LM ++ + Y + G + G + + F M G +SY+ LI+
Sbjct: 146 VFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLL 205
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
++ AL +Y M+ +G+KP + ++ L V + E L +EM+ G+ + +
Sbjct: 206 QSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIY 265
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY I L + I EA + + + C D+ Y LID L
Sbjct: 266 TYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDAL 309
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 184/368 (50%), Gaps = 33/368 (8%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLF-PDLYTYNILINCFCKMGRVSHGFVVLGR 77
S NI+ L +FK + +G+F P+L +Y I+I+ CK +V + +
Sbjct: 173 SHNIVLRGLCSGGKISMAWEVFKDM--SGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQ 230
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
++ P+ VT+ +LI GL + R+ EA LF + R GC P V TYNT+I+GL + G
Sbjct: 231 MVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGR 290
Query: 138 TIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
AL L+++M +++ ++ PD+ TY+++I G +N
Sbjct: 291 IENALTLYDDM----------------------VREPHLKPDMFTYSALINGLNLSNRGE 328
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV----RPNAFVY 253
+A L EM+D G P+VVT+N ++D LCK+G D+A +++ ++GV PN Y
Sbjct: 329 KAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKA---MEIFRKMGVGNVCDPNVITY 385
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
L+D FC R+ A +L ME +++ +I CK I+ A L+ E +
Sbjct: 386 TVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELF-ESIG 444
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
K KPD V++NT+ +I +++ A KL D M G A TY + G C+ +
Sbjct: 445 KTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSD 504
Query: 374 AVELFRTL 381
A+ ++ +
Sbjct: 505 ALIMYHEM 512
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 165/319 (51%), Gaps = 15/319 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S+ I+ L K++ D ++LFK++ ++PD+ TY LI+ K RV + +
Sbjct: 203 PNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDL 262
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPNVFTYNTLINGLY 133
P VT+ ++I GLC RI A L+ + R +P++FTY+ LINGL
Sbjct: 263 FEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLN 322
Query: 134 RTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENI-NPDV 180
+ A L+EEM V G DKA E+F +M N+ +P+V
Sbjct: 323 LSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNV 382
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+TYT +I FC + +A L EM + + P+ VTF ++ +LCK ++DEA L +
Sbjct: 383 ITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFE- 441
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
I +P++ ++NT++ G+C R++ AK+L M GC T+ +Y+ L+ G+C+
Sbjct: 442 SIGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGR 501
Query: 301 IEGALSLYGEMLSKGIKPD 319
AL +Y EM+ G P+
Sbjct: 502 YSDALIMYHEMIEMGFPPE 520
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 189/363 (52%), Gaps = 21/363 (5%)
Query: 53 YTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 112
+T N L++ + K RV + +++ F P+ V++ +L+ G + +A ALF +
Sbjct: 103 FTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGE 162
Query: 113 LRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG---------VEGF--- 160
++ G + ++N ++ GL G +A +F++M+ G F ++G
Sbjct: 163 MKDSGIA-VLRSHNIVLRGLCSGGKISMAWEVFKDMS---GIFSPNLISYTIMIDGLCKS 218
Query: 161 --VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
VDKA LF QM D+ I PDVVTY ++I G EA L E +G P VVT+
Sbjct: 219 RKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTY 278
Query: 219 NVIMDELCKNGKMDEASRLLDLMI-QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
N ++D LCK G+++ A L D M+ + ++P+ F Y+ L++G L+ R +A EL+ M
Sbjct: 279 NTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEML 338
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI-KPDVVIYNTLFVVLFEIHQV 336
GC+ V +Y+ L++G CK+ + A+ ++ +M + P+V+ Y L ++ ++
Sbjct: 339 DTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRL 398
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
A KL EM+ + D T+ T I LCK S I EA ELF ++ C+ D +N +
Sbjct: 399 GDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIG-KTCKPDSVLFNTM 457
Query: 397 IDG 399
+ G
Sbjct: 458 LAG 460
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 165/322 (51%), Gaps = 29/322 (9%)
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+S FT N T +L+ R+ +A F EP+ +YNTL+NG ++ G
Sbjct: 95 QSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGD-- 152
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
V KA LF +MKD I + ++ V+RG C + A
Sbjct: 153 ---------------------VKKALALFGEMKDSGIAV-LRSHNIVLRGLCSGGKISMA 190
Query: 200 KCLLIEMMDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
+ +M G+ PN++++ +++D LCK+ K+D+A L M+ + P+ Y L+D
Sbjct: 191 WEVFKDM--SGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALID 248
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG-IK 317
G RV A +LF + GC TV +Y+ +I+G CK IE AL+LY +M+ + +K
Sbjct: 249 GLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLK 308
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
PD+ Y+ L L ++ E+A++L++EM G + D TY T +DGLCK+ +A+E+
Sbjct: 309 PDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEI 368
Query: 378 FRTLRILK-CELDIRAYNCLID 398
FR + + C+ ++ Y LID
Sbjct: 369 FRKMGVGNVCDPNVITYTVLID 390
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 123/237 (51%), Gaps = 4/237 (1%)
Query: 166 ELFLQMKDENI-NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
LF Q +N+ PD V+Y +++ GF A D +A L EM D G+ + + N+++
Sbjct: 122 HLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIA-VLRSHNIVLRG 180
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
LC GK+ A + M I PN Y ++DG C + +V++A LF M
Sbjct: 181 LCSGGKISMAWEVFKDMSGI-FSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPD 239
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
V +Y LI+G K + ++ A L+ E +KG P VV YNT+ L + ++E A L+D
Sbjct: 240 VVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYD 299
Query: 345 EMQRDG-VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+M R+ + D +TY I+GL ++ +A EL+ + C D+ YN L+DGL
Sbjct: 300 DMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGL 356
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 91/187 (48%), Gaps = 2/187 (1%)
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
N T N ++ K ++++A ++ P+ YNTLM+GF G V +A LF
Sbjct: 101 NRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALF 160
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
M+ G + S++I++ G C +I A ++ +M S P+++ Y + L +
Sbjct: 161 GEMKDSGIA-VLRSHNIVLRGLCSGGKISMAWEVFKDM-SGIFSPNLISYTIMIDGLCKS 218
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
+V++A LF +M + D TY IDGL K + EA +LF R C + Y
Sbjct: 219 RKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTY 278
Query: 394 NCLIDGL 400
N +IDGL
Sbjct: 279 NTMIDGL 285
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 110/248 (44%), Gaps = 25/248 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
++D M+ P + +++ L L + + L++ + TG PD+ TYN L++
Sbjct: 297 LYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGL 356
Query: 63 CKMGRVSHGFVVLGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK G + ++ + + PN +T+T LI C R+ +A L ++ P+
Sbjct: 357 CKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPD 416
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
T+ T+I L + E +D+A ELF + + PD V
Sbjct: 417 AVTFTTVIQKLCK-----------------------ESRIDEAHELFESI-GKTCKPDSV 452
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+ +++ G+C ++AK L M+D G P + T+ ++ C+ G+ +A + M
Sbjct: 453 LFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEM 512
Query: 242 IQIGVRPN 249
I++G P
Sbjct: 513 IEMGFPPE 520
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 172/386 (44%), Gaps = 26/386 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S N L L K D F+ + PD+YT+N +I+ C++G++ V
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAES---RIMEAAALFTKLRVFGCEPNVFTYNTLING 131
I P+ T+ SLI G C + + L ++ G P T+ LING
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
+ +T A+ +FEEM K + I VVTY S+I G C
Sbjct: 274 YCKNSNTAAAVRVFEEM-----------------------KQQGIAASVVTYNSLISGLC 310
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
E L+ EM D G+ PN +TF ++ CK G M +A+ +D M + V P+
Sbjct: 311 SEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVV 370
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
+YN L+D + G++ A + +M G + V +Y+ LI G+ ++ + A L EM
Sbjct: 371 IYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEM 430
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
KGI+ DVV YN L L +V +A KL DEM G+ + TY T I G C I
Sbjct: 431 KEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNI 490
Query: 372 VEAVELFRTLRILKCELDIRAYNCLI 397
A E+ + + ++ YN I
Sbjct: 491 KSAYEIRTRMEKCRKRANVVTYNVFI 516
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 178/379 (46%), Gaps = 51/379 (13%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F L R SP + +FN + L + + K + + GL P + TYN LI+ +C
Sbjct: 179 FRSALRRRVSPD-IYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYC 237
Query: 64 KMGRVS---HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
K G H ++L ++ + +P AVTF LI G C S A +F +++ G
Sbjct: 238 KKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAA 297
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEM-----ASGNGEFG--VEGFVDK-----AKELF 168
+V TYN+LI+GL G + L EEM + FG ++GF K A +
Sbjct: 298 SVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWI 357
Query: 169 LQMKDENINPDVV-----------------------------------TYTSVIRGFCYA 193
M + N+ PDVV TY +I GF +
Sbjct: 358 DGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRS 417
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
DW A LL EM ++G++ +VVT+NV++ LC G++ +A +LLD M ++G+ PN Y
Sbjct: 418 GDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTY 477
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
NT++ GFC G + A E+ ME V +Y++ I +C+ +++ A L EML
Sbjct: 478 NTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLD 537
Query: 314 KGIKPDVVIYNTLFVVLFE 332
K + P+ + Y T+ + E
Sbjct: 538 KCLVPNGITYETIKEGMME 556
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 146/319 (45%), Gaps = 26/319 (8%)
Query: 85 PNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNL 144
P+ + +L+ GL R+ A F P+++T+NT+I+GL R G
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQ------- 206
Query: 145 FEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY---ANDWNEAKC 201
+ KA ++ +K + P V TY S+I G+C A +
Sbjct: 207 ----------------LRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDM 250
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
LL EM++ G+ P VTF V+++ CKN A R+ + M Q G+ + YN+L+ G C
Sbjct: 251 LLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLC 310
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
G+V +L ME +G + ++ ++ G+CK + A M + ++PDVV
Sbjct: 311 SEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVV 370
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
IYN L V + ++E A + + M + G++ + TY I G ++ A L +
Sbjct: 371 IYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEM 430
Query: 382 RILKCELDIRAYNCLIDGL 400
+ E D+ YN LI L
Sbjct: 431 KEKGIEADVVTYNVLIGAL 449
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 97/194 (50%), Gaps = 9/194 (4%)
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
+P+ + N ++ L ++D A + ++ V P+ + +NT++ G C G++ +A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY------GEMLSKGIKPDVVIYNT 325
+ +++ G +V +Y+ LI+GYCK GA ++Y EM+ GI P V +
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKG---GAGNMYHVDMLLKEMVEAGISPTAVTFGV 269
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L + A ++F+EM++ G+AA TY + I GLC + E V+L + L
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329
Query: 386 CELDIRAYNCLIDG 399
+ + C++ G
Sbjct: 330 LSPNEITFGCVLKG 343
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 55/122 (45%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++N+L G L + L ++ GL P+ TYN +I FC G + + +
Sbjct: 439 VVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRT 498
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
R+ + N VT+ IK C ++ EA L ++ PN TY T+ G+ G
Sbjct: 499 RMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558
Query: 137 HT 138
+T
Sbjct: 559 YT 560
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 179/375 (47%), Gaps = 31/375 (8%)
Query: 26 CLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFT 84
CLA + L + + G+ P YN ++ CK G+V V+ +
Sbjct: 29 CLAG--ELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACK 86
Query: 85 PNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNL 144
P+ VTF +LI GLC R+ EA + ++ G N+ TYNTLINGL G
Sbjct: 87 PDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAG-------- 138
Query: 145 FEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
++ E L M+ PD TY ++I GFC + + + A L
Sbjct: 139 ------------------RSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLE 180
Query: 205 EMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI-QIGVRPNAFVYNTLMDGFCL 262
EM + G P+ T++++++ LCK+ + +A LL MI + + +NTL+DG+C
Sbjct: 181 EMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCK 240
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
++RA+EL SM GC V +YS +I+G C+ +++ +L +M+S+G KPDVV
Sbjct: 241 AQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVT 300
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
Y L L + ++ A +L M DG + TY DGLCK + A +L ++R
Sbjct: 301 YTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIR 360
Query: 383 ILKCELDIRAYNCLI 397
D+ A+ L+
Sbjct: 361 DKGRVTDVVAFETLL 375
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 166/353 (47%), Gaps = 29/353 (8%)
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
D YTY +L+ C G + +L + + P + + LC ++ EA +
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL 169
++ C+P+V T+NTLI GL + G +D+A+++
Sbjct: 77 VKNMKDGACKPDVVTFNTLIAGLCKAGR-----------------------LDEAQQVLD 113
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M+ ++VTY ++I G A EA ++ M P+ T+N I+ CK+G
Sbjct: 114 EMERSGFAANLVTYNTLINGLSSAGRSGEA---VLVMQGMTTTPDTQTYNAIIHGFCKSG 170
Query: 230 KMDEASRLLDLMIQ-IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMGCTHTVFS 287
++D A L+ M Q G P+ F Y+ L++G C + + +A EL M C +V +
Sbjct: 171 EIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVA 230
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
++ L++GYCK ++++ A L ML G PDVV Y+T+ L V++ F L ++M
Sbjct: 231 FNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMV 290
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G D TY + GLCK +VEA L + + C + Y+ + DGL
Sbjct: 291 SRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGL 343
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 160/342 (46%), Gaps = 20/342 (5%)
Query: 4 FDYMLNMRPSP---PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
D + M P P +N L K+ + + K + PD+ T+N LI
Sbjct: 38 MDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIA 97
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK GR+ VL + RS F N VT+ +LI GL + R EA + + P
Sbjct: 98 GLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTT---TP 154
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNG--------EFGVEGF-----VDKAKEL 167
+ TYN +I+G ++G A EEM G + G + KA EL
Sbjct: 155 DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADEL 214
Query: 168 FLQM-KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
+M ++ VV + +++ G+C A D + A+ LL M++ G P+VVT++ I+D LC
Sbjct: 215 LQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLC 274
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
+ G +D+ LL+ M+ G +P+ Y L+ G C G++ A L M GCT
Sbjct: 275 RCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAV 334
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
+YS++ +G CK +++ A L + KG DVV + TL +
Sbjct: 335 TYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLL 376
>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 870
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 204/461 (44%), Gaps = 79/461 (17%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF-V 73
P +FN+L L ++ D LF +++ G P+ +T IL+ FC+ GR
Sbjct: 149 PETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQALEF 208
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
V G++ + N V + +L+ C + EA L ++ G P+V T+N+ I+ L
Sbjct: 209 VDGKMGGNV---NRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALC 265
Query: 134 RTGHTIVALNLFEEMASGNGEFGV-----------------EGFVDKAKELFLQMKDENI 176
R G A +F +M +GE G+ EG +++A+ L MK
Sbjct: 266 RAGKVFEASRIFRDMQM-DGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGN 324
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
+ +Y + + G E + +L EM++ G++PN+ ++N++MD LC+N M +A R
Sbjct: 325 FVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARR 384
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF---------- 286
L+DLM+ GV P+ Y TL+ G+C G+V AK + M GC +
Sbjct: 385 LMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLW 444
Query: 287 ------------------SY-------SILINGYCKNKEIEGALSLYGEMLSKGIK---- 317
SY +I++NG C+N E+E A + EM + G
Sbjct: 445 KEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGK 504
Query: 318 ------------------PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
PDV+ Y TL L ++ ++E A K F EM + D+ TY
Sbjct: 505 ENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYD 564
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TF+ CK I A+ + + + C ++ YN LI GL
Sbjct: 565 TFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGL 605
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 187/421 (44%), Gaps = 46/421 (10%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+N L K D L +R+ GL PD+ T+N I+ C+ G+V RI
Sbjct: 222 YNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEA----SRIF 277
Query: 80 RSCF--------TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
R PN VTF ++KG C E + EA +L ++ G ++ +YNT + G
Sbjct: 278 RDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLG 337
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPD 179
L R G + ++ +EM E + + + A+ L M + PD
Sbjct: 338 LLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPD 397
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
VTYT+++ G+C EAK +L EM+ +G PN T N +++ L K G+ EA +L
Sbjct: 398 TVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQ 457
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH---------------- 283
M + + + N +++G C G + +A E+ M + G
Sbjct: 458 KMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHN 517
Query: 284 ------TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
V +Y+ LING CK ++E A + EM++K + PD V Y+T + + ++
Sbjct: 518 VSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKIS 577
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
A ++ +M+R+G + TY + I GL I E L +R DI YN +I
Sbjct: 578 SALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMI 637
Query: 398 D 398
+
Sbjct: 638 N 638
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 163/337 (48%), Gaps = 14/337 (4%)
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
++++ P TF LI+ LC + + A LF K+ GC+PN FT L+ G R G
Sbjct: 142 MIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGR 201
Query: 138 TIVALNLFEEMASGN----------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
T AL + GN F + D+A++L +M ++ + PDVVT+ S I
Sbjct: 202 TKQALEFVDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRI 261
Query: 188 RGFCYANDWNEAKCLLIEMMDQG----VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
C A EA + +M G +PNVVTFN+++ C+ G M+EA L++ M +
Sbjct: 262 SALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKK 321
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G + YNT + G G++ + + M G ++SY+I+++G C+N +
Sbjct: 322 GGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLD 381
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A L M+S G+ PD V Y TL +V A + +EM R G +T+T T ++
Sbjct: 382 ARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLN 441
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
L K EA E+ + + +LD N +++GL
Sbjct: 442 SLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGL 478
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 179/383 (46%), Gaps = 46/383 (12%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S+N L +N S+ + G+ P++Y+YNI+++ C+ + ++ +
Sbjct: 330 SYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLM 389
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ + P+ VT+T+L+ G C++ ++ EA A+ ++ GC PN +T NTL+N L++
Sbjct: 390 VSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWK---- 445
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
EG +A+E+ +M +++ D VT V+ G C + +
Sbjct: 446 -------------------EGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEK 486
Query: 199 AKCLLIEMMDQGVQ----------------------PNVVTFNVIMDELCKNGKMDEASR 236
A ++ EM G P+V+T+ +++ LCK GK++EA +
Sbjct: 487 ASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKK 546
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
M+ + P++ Y+T + FC G+++ A + ME GC+ T+ +Y+ LI G
Sbjct: 547 KFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLG 606
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG-VAADT 355
+I L EM +GI PD+ YN + L E + + A L EM G V+ +
Sbjct: 607 SKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNV 666
Query: 356 WTYRTFIDGLCKNSYIVEAVELF 378
+++ I CK+ A ELF
Sbjct: 667 SSFKILIKAFCKSGDFKVACELF 689
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 180/439 (41%), Gaps = 71/439 (16%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S+NI+ L +N L + S G++PD TY L++ +C G+V +
Sbjct: 361 PNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAI 420
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++R PN T +L+ L E R EA + K+ + + T N ++NGL R
Sbjct: 421 LNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCR 480
Query: 135 TGHTIVALNLFEEM-ASGNGEFGVE---------------------------------GF 160
G A + EM G G E G
Sbjct: 481 NGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGK 540
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYA----------NDWNEAKC--------- 201
+++AK+ F++M +N++PD VTY + + FC D C
Sbjct: 541 LEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNS 600
Query: 202 ----------------LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
L+ EM ++G+ P++ T+N +++ LC+ GK +A+ LL M+ G
Sbjct: 601 LILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKG 660
Query: 246 V-RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
V PN + L+ FC +G A ELF S+ C H YS++ N ++ A
Sbjct: 661 VVSPNVSSFKILIKAFCKSGDFKVACELFDVALSV-CGHKEALYSLMFNELLAGGKLSDA 719
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L+ L + + +Y L L + +++ A L ++ G D ++ IDG
Sbjct: 720 KELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDG 779
Query: 365 LCKNSYIVEAVELFRTLRI 383
L K +A EL R + +
Sbjct: 780 LSKRGNKQQADELGRIMEL 798
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 144/329 (43%), Gaps = 25/329 (7%)
Query: 9 NMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV 68
N+ + P V ++ L L K + F + + L PD TY+ + FCK G++
Sbjct: 517 NVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKI 576
Query: 69 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTL 128
S VL + R+ + T+ SLI GL ++ +I E L ++R G P++ TYN +
Sbjct: 577 SSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNM 636
Query: 129 INGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
IN L G T A +L EM +DK ++P+V ++ +I+
Sbjct: 637 INCLCEGGKTKDATSLLHEM------------LDKGV----------VSPNVSSFKILIK 674
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
FC + D+ A C L ++ ++++ +EL GK+ +A L + ++ +
Sbjct: 675 AFCKSGDFKVA-CELFDVALSVCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLS 733
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK--NKEIEGALS 306
F+Y L+D C GR++ A L + G S+ +I+G K NK+ L
Sbjct: 734 KNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADELG 793
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
E+ + D N + ++H+
Sbjct: 794 RIMELALEDKTSDRTYRNGNSIFRRKLHK 822
>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
Length = 719
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 188/409 (45%), Gaps = 47/409 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L + K+Y ++ + + + P +YTY +IN CK + V
Sbjct: 261 PGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRV 320
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + P+ V +T++I GLC EA L+ ++ G +PN +TYNT+++G +
Sbjct: 321 FNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLK 380
Query: 135 TGHTIVALNLFEEMAS-GNG-----------EFGVEGFVDKAKELFLQMKDENINPDVVT 182
+G A L+ EM + G G E G D+A E+F +M + I D +T
Sbjct: 381 SGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAIT 440
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S+IRGFC +E LL E++ Q QP+V + +++ + CK+G + A RLL M
Sbjct: 441 YNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMS 500
Query: 243 QIGVRPNAFVYNTLMDG-----------------------------------FCLTGRVN 267
G+ PNA+ Y+T++ G C G+ +
Sbjct: 501 SKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSD 560
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A E+F M G +Y+ LI G+CK ++ +++L E++++G++P Y +L
Sbjct: 561 EASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLI 620
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+ L + E A +L+ +M G+ I GLCK E ++
Sbjct: 621 IQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMD 669
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 181/396 (45%), Gaps = 21/396 (5%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI--LINCFCKMGRVSHGFVVLGRI 78
+IL GCL K + + ++ + G D T + LI FC G+V+ G+ +L +
Sbjct: 196 SILSGCLKAGK-TELLFEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQF 254
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
L++ P T+ LI G C + + + P ++TY +INGL +
Sbjct: 255 LKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEEC 314
Query: 139 IVALNLFEE---------------MASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
+ A +F + M G E G G +A++L+ +M D+ + P+ TY
Sbjct: 315 LEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFG---EARKLWFEMMDKGMQPNAYTY 371
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
+++ G + D+ A L EM ++G VT N I+ ELC GK DEA + M +
Sbjct: 372 NTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSE 431
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G++ +A YN+L+ GFC G+V+ L + + +V Y +LI CK+ + E
Sbjct: 432 TGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEA 491
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A L G+M SKG+ P+ Y+T+ + E +L++E G T T I
Sbjct: 492 AKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIIS 551
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
LC EA E+F+ + + D YN LI G
Sbjct: 552 ELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRG 587
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 165/364 (45%), Gaps = 21/364 (5%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILR--SCFTPNAVTFTSLIKGLCAESRIMEAA 107
PD + N+L + V +++R + F P++ + +K LC I EA
Sbjct: 122 PDPISSNMLFEAL-----LDAKAVRAAKMVRDIAGFIPDSASLEQYVKCLCGVGFIEEAI 176
Query: 108 ALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM------ASGNGE------- 154
++ +L+ G ++ N++++G + G T + ++EM + N E
Sbjct: 177 EVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQ 236
Query: 155 -FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
F G V + EL Q ++P TY +I GFC A ++ +L M+ + P
Sbjct: 237 AFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLP 296
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
+ T+ I++ LCKN + EA R+ + + G P+ +Y T++ G C G A++L+
Sbjct: 297 TIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLW 356
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
M G ++Y+ +++G K+ + E A LY EM +KG V N + L
Sbjct: 357 FEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSR 416
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
+ + AF++F +M G+ AD TY + I G CK + E + L L + + Y
Sbjct: 417 GKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLY 476
Query: 394 NCLI 397
LI
Sbjct: 477 ELLI 480
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 127/268 (47%), Gaps = 12/268 (4%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
N + L D +FK+++ TG+ D TYN LI FCK G+V +L ++
Sbjct: 407 NKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVA 466
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
P+ + LI C + A L + G PN +TY+T+++G ++G
Sbjct: 467 QDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEH 526
Query: 141 ALNLFEEMAS-GNG-----------EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
L+ E + G G E G D+A E+F +M + I D +TY S+IR
Sbjct: 527 VRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIR 586
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
GFC ++ LL E++ QG+QP+ ++ ++ +LC+NG + A RL M+ G+ P
Sbjct: 587 GFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEP 646
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSM 276
+A + L+ G C GR + + M
Sbjct: 647 HANLREHLISGLCKQGRATEGMDRLMGM 674
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 77/193 (39%), Gaps = 2/193 (1%)
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
G P+ + + LC G ++EA + + + G+R + N+++ G G+
Sbjct: 151 GFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELL 210
Query: 270 KELFVSMESMGCTHTVFSYSI--LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
E + M G + ++ LI +C + ++ L + L G+ P YN L
Sbjct: 211 FEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLI 270
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
+ ++ M +TY+ I+GLCKN +EA +F L+
Sbjct: 271 AGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYA 330
Query: 388 LDIRAYNCLIDGL 400
D Y +I GL
Sbjct: 331 PDRVMYTTMIHGL 343
>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1245
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 196/399 (49%), Gaps = 14/399 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N + K + + L +N G+ D+ TYN+LI+ C+ R + G+++
Sbjct: 226 PTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLL 285
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + PN VT+ +L+ G E +++ A L ++ FG PN T+N LI+G
Sbjct: 286 LRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHIS 345
Query: 135 TGHTIVALNLFEEMASGNGEFGVE-------------GFVDKAKELFLQMKDENINPDVV 181
G+ AL +F M G G E D A+ +++MK + +
Sbjct: 346 EGNFKEALKMF-HMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 404
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT +I G C +EA +L EM G+ P++VT++ +++ C+ G++ A ++ +
Sbjct: 405 TYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRI 464
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++G+ PN +Y+TL+ C G + ++ +M G T F++++L+ CK ++
Sbjct: 465 YRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKV 524
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A M S GI P+ V ++ L + +AF +FDEM + G +TY +
Sbjct: 525 AEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 584
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ GLCK +++ A + ++L+ + +D N LI +
Sbjct: 585 LKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAM 623
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 186/398 (46%), Gaps = 14/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + N + G + K+ +V S K + + PD+ T+NILIN C G +
Sbjct: 156 PSVYTCNAILGSIVKSCEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYL 215
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ ++ +S + P VT+ +++ C + R A L + + G +V TYN LI+ L R
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCR 275
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
+ + L +M NG F EG V A++L +M ++P+ V
Sbjct: 276 SNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNG-FSNEGKVLIARQLLNEMLTFGLSPNHV 334
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
T+ ++I G ++ EA + M +G+ V++ V++D LCKN + D A M
Sbjct: 335 TFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRM 394
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ GV Y ++DG C G ++ A + M G + +YS LING+C+ +
Sbjct: 395 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRL 454
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A + + G+ P+ +IY+TL + ++ ++++ M +G D +T+
Sbjct: 455 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVL 514
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ LCK + EA E R + + +++CLI+G
Sbjct: 515 VTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLING 552
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 163/365 (44%), Gaps = 25/365 (6%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
S P V F+IL + L +F+ + G P +YT N ++ K +
Sbjct: 121 SNPSV--FDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVW 178
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
L +L+ P+ TF LI LCAE +++ L K+ G P + TYNT+++
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ G A+ EL M + +N DV TY +I C
Sbjct: 239 CKKGRFKAAI-----------------------ELLDHMNLKGVNADVCTYNMLIHDLCR 275
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
+N + LL +M + + PN VT+N +++ GK+ A +LL+ M+ G+ PN
Sbjct: 276 SNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVT 335
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
+N L+DG G A ++F ME+ G T SY +L++G CKN E + A Y M
Sbjct: 336 FNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMK 395
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
G+ + Y + L + ++ A + +EM +DG+ D TY I+G C+ +
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLK 455
Query: 373 EAVEL 377
A E+
Sbjct: 456 TAKEI 460
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 168/378 (44%), Gaps = 19/378 (5%)
Query: 25 GCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFT 84
GCL + + +++ + G PD +T+N+L+ CK G+V+ + +
Sbjct: 487 GCLKE------TIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540
Query: 85 PNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNL 144
PNAV+F LI G + ++A ++F ++ G P FTY +L+ GL + GH I A
Sbjct: 541 PNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKF 600
Query: 145 FEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ + + G +DKA LF +M +I PD TYTS+I G C
Sbjct: 601 LKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCR 660
Query: 193 ANDWNEAKCLLIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
A E +G + PN V + +D + K G+ M ++G+ +
Sbjct: 661 KGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVV 720
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
N ++DG+ G++ + +L M + + +Y+IL++GY K K + + LY M
Sbjct: 721 TTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSM 780
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
+ GI PD + ++ + + E + +E K+ GV D T+ I C N I
Sbjct: 781 ILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEI 840
Query: 372 VEAVELFRTLRILKCELD 389
A ++ + L LD
Sbjct: 841 NWAFDMVNVMTSLGISLD 858
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 159/367 (43%), Gaps = 15/367 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P SF+ L + S+F + G P +TY L+ CK G +
Sbjct: 541 PNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKF 600
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + V +LI +C + +A +LF ++ P+ FTY +LI+GL R
Sbjct: 601 LKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCR 660
Query: 135 TGHTIVALNLFEEMASGNGEFGVEG-----FVD--------KAKELFLQMKDE-NINPDV 180
G T++A+ LF + A G FVD KA F Q D+ + DV
Sbjct: 661 KGKTVIAI-LFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDV 719
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VT ++I G+ + LL EM +Q PN+ T+N+++ K + + L
Sbjct: 720 VTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRS 779
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
MI G+ P+ +++ G C + + ++ + G ++++LI+ C N E
Sbjct: 780 MILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGE 839
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
I A + M S GI D + + VL H+ + + + EM + G++ ++ Y
Sbjct: 840 INWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIG 899
Query: 361 FIDGLCK 367
++GLC+
Sbjct: 900 LLNGLCR 906
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/448 (21%), Positives = 184/448 (41%), Gaps = 49/448 (10%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +FD M + P ++ L L K H K L + D N LI
Sbjct: 563 FSVFDEMTKV-GHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLIT 621
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CE 119
CK G + + G +++ P++ T+TSLI GLC + + + A + G
Sbjct: 622 AMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLV 681
Query: 120 PNVFTYNTLINGLYRTGH---------TIVALNLFEEMASGNG---EFGVEGFVDKAKEL 167
PN Y ++G+++ G + L L ++ + N + G ++K +L
Sbjct: 682 PNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDL 741
Query: 168 FLQMKDENINPDVVTYT-----------------------------------SVIRGFCY 192
+M ++N P++ TY S+I G C
Sbjct: 742 LFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICE 801
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
+N +L + +GV+ + TFN+++ + C NG+++ A ++++M +G+ +
Sbjct: 802 SNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNT 861
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
+ ++ R ++ + M G + Y L+NG C+ +I+ A + EM+
Sbjct: 862 CDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMI 921
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
+ I P V + + L + + + A L M + + ++ T + CKN +
Sbjct: 922 AHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVT 981
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
EA+EL + +LD+ +YN LI GL
Sbjct: 982 EALELRVVMSNCGLKLDLVSYNVLITGL 1009
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 151/317 (47%), Gaps = 25/317 (7%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
P+L TYNIL++ + K VS F++ ++ S P+ +T S+I G+C ES ++E
Sbjct: 752 PNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGIC-ESNMLEIGLK 810
Query: 110 FTKLRV-FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELF 168
K + G E + T+N LI+ NGE ++ A ++
Sbjct: 811 ILKAFICRGVEVDRHTFNMLISK-----------------CCANGE------INWAFDMV 847
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
M I+ D T +++ + + E++ +L EM QG+ P + +++ LC+
Sbjct: 848 NVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRV 907
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G + A + + MI + P + ++ G+ + A L SM M T+ S+
Sbjct: 908 GDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASF 967
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ L++ +CKN + AL L M + G+K D+V YN L L + AF+LF+EM+R
Sbjct: 968 TTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKR 1027
Query: 349 DGVAADTWTYRTFIDGL 365
DG A+ TY+ + G+
Sbjct: 1028 DGFLANVTTYKALVGGI 1044
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 133/339 (39%), Gaps = 55/339 (16%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPD----------------------- 51
P + ++NIL +K KH T L++ + +G+ PD
Sbjct: 752 PNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKI 811
Query: 52 ------------LYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
+T+N+LI+ C G ++ F ++ + + + T +++ L
Sbjct: 812 LKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNR 871
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------- 152
R E+ + ++ G P Y L+NGL R G A + EEM +
Sbjct: 872 NHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVA 931
Query: 153 -----GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
G D+A L M + P + ++T+++ FC + EA L + M
Sbjct: 932 ESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMS 991
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+ G++ ++V++NV++ LC G M A L + M + G N Y L+ G G
Sbjct: 992 NCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGTEF 1051
Query: 268 RAKELFVS-------MESMGCTHTV-FSYSILINGYCKN 298
++ + + +M H + F I +N Y K+
Sbjct: 1052 SGTDIILKDLLARGFITAMSFNHMINFPQQISVNAYLKH 1090
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%)
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
N V++ L+ + G + + E+F M G +V++ + ++ K+ E S
Sbjct: 122 NPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFL 181
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
EML + I PDV +N L VL +++ L +M++ G A TY T + CK
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
A+EL + + D+ YN LI L
Sbjct: 242 GRFKAAIELLDHMNLKGVNADVCTYNMLIHDL 273
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 195/399 (48%), Gaps = 15/399 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++++L KN + + + + + G+ +Y+ N ++ + K + F +
Sbjct: 296 PNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTM 355
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L S N TF +L+ LC E ++ EA L+ ++ G PNV +YN +I G R
Sbjct: 356 FNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCR 414
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
+ A +++EM +G F +G ++ A +F +MKD NI P
Sbjct: 415 KDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFK-KGDIENAFSIFHRMKDANILPTDT 473
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
T +I+G C A E + L + + QG P + +N I+D K G ++ AS + M
Sbjct: 474 TLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREM 533
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++G+ P+ Y +L+DGFC ++ A +L M+ G + +Y LI+G+CK +++
Sbjct: 534 CEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDM 593
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A L E+ G+ P+ IYN++ ++ VE A L+ +M +G+ D TY +
Sbjct: 594 KSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSL 653
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
IDGL K+ ++ A ++ + D RA+ LI+GL
Sbjct: 654 IDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGL 692
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 198/432 (45%), Gaps = 46/432 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
PP +F + K + L L + + G +L L+ +C G + V+
Sbjct: 226 PPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVL 285
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ I S PN VT++ LI G C I +A +++++ G +V++ N+++ G +
Sbjct: 286 VNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLK 345
Query: 135 TGHTIVALNLFEE-MASGNGEFGV----------EGFVDKAKELFLQMKDENINPDVVTY 183
A +F + + SG EG +++A L+ ++ + I+P+VV+Y
Sbjct: 346 CQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSY 405
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD-------------------- 223
++I G C ++ N A + EM+D G PN VTF ++MD
Sbjct: 406 NNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKD 465
Query: 224 ---------------ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
LCK G+ E L + + G P YNT++DGF G +N
Sbjct: 466 ANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINL 525
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
A ++ M +G T + +Y+ LI+G+CK I+ AL L +M KG+K D+ Y TL
Sbjct: 526 ASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLID 585
Query: 329 VLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
+ ++ A +L +E++ G++ + + Y + I G + + EA++L++ +
Sbjct: 586 GFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPC 645
Query: 389 DIRAYNCLIDGL 400
D++ Y LIDGL
Sbjct: 646 DLKTYTSLIDGL 657
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 179/378 (47%), Gaps = 21/378 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
++D ++ SP V NI+ G K+ + + ++K + G P+ T+ IL++ +
Sbjct: 389 LWDEVIAKGISPNVVSYNNIILGHCRKD-NINAACKVYKEMLDNGFTPNAVTFTILMDGY 447
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K G + + F + R+ + P T +IKGLC R E LF K G P
Sbjct: 448 FKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTC 507
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV-----------EGF-----VDKAKE 166
YNT+I+G + G+ +A N++ EM E G+ +GF +D A +
Sbjct: 508 MPYNTIIDGFIKEGNINLASNVYREMC----EVGITPSTVTYTSLIDGFCKGNNIDLALK 563
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
L MK + + D+ Y ++I GFC D A LL E+ G+ PN +N ++
Sbjct: 564 LLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFK 623
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
++EA L M+ G+ + Y +L+DG +GR+ A ++ M S G
Sbjct: 624 NMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDR 683
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
++++LING C + E A + +M K + P V+IYNTL F+ ++ AF+L DEM
Sbjct: 684 AHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEM 743
Query: 347 QRDGVAADTWTYRTFIDG 364
G+ D TY ++G
Sbjct: 744 LDRGLVPDNITYDILVNG 761
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 181/409 (44%), Gaps = 61/409 (14%)
Query: 26 CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTP 85
CL N Y LSL + + + G P T+ +I K G V+ + ++ +
Sbjct: 204 CLKPNSGY--ALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSM 261
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
N TSL+KG C + + A L ++ G PN TY+ LI+G + G+
Sbjct: 262 NLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGN-------- 313
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
++KA E + +MK + I V + S++ G+ W A + +
Sbjct: 314 ---------------IEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 358
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
++ G+ NV TFN ++ LCK GKM+EA L D +I G+ PN YN ++ G C
Sbjct: 359 ALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDN 417
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM-------------- 311
+N A +++ M G T +++IL++GY K +IE A S++ M
Sbjct: 418 INAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGI 477
Query: 312 ---------------------LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+S+G P + YNT+ + + A ++ EM G
Sbjct: 478 IIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVG 537
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ T TY + IDG CK + I A++L ++ ++DI+AY LIDG
Sbjct: 538 ITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDG 586
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 115/242 (47%), Gaps = 1/242 (0%)
Query: 158 EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
EG + +A++ FLQ K + D Y+ + C + A LL EM G P T
Sbjct: 171 EGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGT 230
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
F ++ K G + EA RL D M+ G N V +LM G+C+ G + A L +
Sbjct: 231 FTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEIS 290
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
G +YS+LI+G CKN IE A Y EM +KGI+ V N++ + +
Sbjct: 291 ESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQ 350
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
AF +F++ G+ A+ +T+ T + LCK + EA L+ + ++ +YN +I
Sbjct: 351 NAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNII 409
Query: 398 DG 399
G
Sbjct: 410 LG 411
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 183/397 (46%), Gaps = 17/397 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++NIL L KN D L ++S G PD +Y LI+ CK+G+V
Sbjct: 179 PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA--- 235
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R L FTP+ + +LI G+C E EA L ++ G +PNV +Y T+IN L
Sbjct: 236 --RELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSD 293
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQ------------MKDENINPDVVT 182
G+ ++L + +M + + F K FL+ M E + P+VV
Sbjct: 294 AGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVA 353
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++ G C +A + +M G PNV T++ ++D K G +D AS + + MI
Sbjct: 354 YNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMI 413
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G PN Y ++D C N+A L +M+ C +++ I G C + ++
Sbjct: 414 THGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVD 473
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ ++ +M + G P+ YN L L + + AF L +M+ G+ + TY T I
Sbjct: 474 WAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTII 533
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G C + EA+EL + + + D N +ID
Sbjct: 534 YGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDA 570
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 183/386 (47%), Gaps = 28/386 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N + L + + ++ + G+ P+++TYNIL+ CK RV +
Sbjct: 144 PTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKL 203
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P+ V++T+LI LC ++ EA L P+V YN LING+ +
Sbjct: 204 LVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSF-----TPSVPVYNALINGVCK 258
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
E ++A +L +M ++ I+P+V++YT++I A
Sbjct: 259 -----------------------EYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAG 295
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ + +L +M +G PN+ TF ++ G EA D MI+ GV PN YN
Sbjct: 296 NVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYN 355
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
LM G C + A +F ME GC V +YS LI+GY K +++GA ++ M++
Sbjct: 356 ALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITH 415
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G P+VV Y + VL +A+ L + MQ + +T T+ TFI GLC + + A
Sbjct: 416 GCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWA 475
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+++F + C + YN L+D L
Sbjct: 476 IKVFDQMGNSGCFPNTTTYNELLDSL 501
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 186/400 (46%), Gaps = 24/400 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F + D M+N + P V S+ + L+ + + L++ ++ + G P+L+T+ LI
Sbjct: 266 FQLLDEMMN-KGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIK 324
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
F G R++R PN V + +L+ GLC++ + +A ++F ++ + GC P
Sbjct: 325 GFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCP 384
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
NV TY+ LI+G + G +D A E++ M +P+V
Sbjct: 385 NVRTYSALIDGYAKAGD-----------------------LDGASEVWNWMITHGCHPNV 421
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
V YT ++ C + +N+A CL+ M + PN VTFN + LC +G++D A ++ D
Sbjct: 422 VAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQ 481
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M G PN YN L+D R A L ME G + +Y+ +I GYC
Sbjct: 482 MGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGM 541
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ AL L G+M+ +G KPD + N + + +V A +L D + D Y +
Sbjct: 542 LGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTS 601
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I G+C + + EA+ R + ++ +N L+ L
Sbjct: 602 LISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHL 641
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 127/282 (45%), Gaps = 40/282 (14%)
Query: 153 GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
G + G ++A + F +M+D + P V Y ++ N + + M G++
Sbjct: 119 GSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGME 178
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
PNV T+N+++ LCKN ++D A +LL M G P+ Y TL+ C G+V A+EL
Sbjct: 179 PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL 238
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
+M T +V Y+ LING CK E A L EM++KGI P+V+ Y T+ L +
Sbjct: 239 -----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSD 293
Query: 333 IHQVE-----------------------------------RAFKLFDEMQRDGVAADTWT 357
VE A +D M R+GV +
Sbjct: 294 AGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVA 353
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
Y + GLC + +AV +F + I C ++R Y+ LIDG
Sbjct: 354 YNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDG 395
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 103/249 (41%), Gaps = 30/249 (12%)
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+TY +I + + + LL +M +G+ + F ++ + G ++A +
Sbjct: 77 LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYR 136
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M V+P +YN ++D R ++ +M+ G VF+Y+IL+ CKN
Sbjct: 137 MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNR 196
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV------------------------ 336
++GA L EM SKG PD V Y TL L ++ +V
Sbjct: 197 VDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGV 256
Query: 337 ------ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
E AF+L DEM G+ + +Y T I+ L + ++ + + C ++
Sbjct: 257 CKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNL 316
Query: 391 RAYNCLIDG 399
+ LI G
Sbjct: 317 HTFTSLIKG 325
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 187/385 (48%), Gaps = 23/385 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++NIL L + + L+L++++N TG+ P + TY+ L+ C+C G + +
Sbjct: 384 PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKL 443
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ FTPN VT+T+L+KG ++ +A AL +++ G N +TYNTLINGL
Sbjct: 444 YTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCV 503
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G E+ F EGFV P +TY S+I GF A
Sbjct: 504 VGRVC-------EVGEMLKRFETEGFV----------------PTAMTYNSIINGFIKAG 540
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
A + +M +G+ PN+VT+ +D CK D A ++L+ + G+RP+ YN
Sbjct: 541 MMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYN 600
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L+ GFC G ++ A ++ V M G + Y+ I GY K +E AL LY +M+ +
Sbjct: 601 SLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKE 660
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
GI D Y TL + V A KL+ EM G D T+ GLC+N I +A
Sbjct: 661 GIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDA 720
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+L + L ++ YN LI+G
Sbjct: 721 RKLLDEMNRLDIRPNVLMYNMLING 745
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 182/376 (48%), Gaps = 13/376 (3%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 95
L +F+ GL P TY +LI + G + + ++ P+ F +IK
Sbjct: 301 ALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIK 360
Query: 96 GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE- 154
GL + +A +LF ++ G P+ FTYN LI+ L + ALNL+E+M +
Sbjct: 361 GLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKP 419
Query: 155 -----------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
+ V G +D+A +L+ +M + P+VVTYT++++G +++A LL
Sbjct: 420 YIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALL 479
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
EM GV N T+N +++ LC G++ E +L G P A YN++++GF
Sbjct: 480 AEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKA 539
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
G + A ++ M + G + +Y+ I+GYCK + AL + ++ KG++PD+ Y
Sbjct: 540 GMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAY 599
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
N+L + + A ++ M +DG+ + Y +FI G + EA+ L+ +
Sbjct: 600 NSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIK 659
Query: 384 LKCELDIRAYNCLIDG 399
+LD Y LIDG
Sbjct: 660 EGIDLDTATYTTLIDG 675
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 189/427 (44%), Gaps = 48/427 (11%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F+++ K YD + LF + ++ + PD ++ I CK+ + +VL ++
Sbjct: 180 FDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQ 239
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+ F P TF S++ L R+ EA + +L G + +V TL++G
Sbjct: 240 DAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVR 299
Query: 140 VALNLFEE-----MASGNGEFGV-------EGFVDKAKELFLQMKDENINPDVVTYTSVI 187
AL++FEE + + + V EG +KA EL QM+D + P + VI
Sbjct: 300 KALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVI 359
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
+G W +A L EM D G+ P+ T+N+++ LC+ K+ EA L + M + GV+
Sbjct: 360 KGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVK 418
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P Y++L+ +C+ G ++ A +L+ M G T V +Y+ L+ G+ + A +L
Sbjct: 419 PYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYAL 478
Query: 308 YGEMLSKGIK-----------------------------------PDVVIYNTLFVVLFE 332
EM G+ P + YN++ +
Sbjct: 479 LAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIK 538
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
+ AF ++ +M G+ + TY +FIDG CK S A+++ +R DI A
Sbjct: 539 AGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAA 598
Query: 393 YNCLIDG 399
YN LI G
Sbjct: 599 YNSLIFG 605
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 186/398 (46%), Gaps = 23/398 (5%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+FN + L K + L + L +TG + L++ +C V +
Sbjct: 249 TFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEET 308
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
LR P VT+T LI+G E +A L ++R G P+ +N +I GL
Sbjct: 309 LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLW 368
Query: 139 IVALNLFEEMASGNGEFGV-EGF--------------VDKAKELFLQMKDENINPDVVTY 183
A++LF+EMA + G+ + F + +A L+ +M + + P +VTY
Sbjct: 369 KDAVSLFKEMA----DSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTY 424
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
S++ +C +EA L EM +G PNVVT+ +M D+A LL M Q
Sbjct: 425 HSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQ 484
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
GV N + YNTL++G C+ GRV E+ E+ G T +Y+ +ING+ K +
Sbjct: 485 NGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGS 544
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A ++Y +M +KGI P++V Y + + + A K+ ++++ G+ D Y + I
Sbjct: 545 AFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIF 604
Query: 364 GLCKNSYIVEAVELFRTLRILKCEL--DIRAYNCLIDG 399
G C+ + A+++ + +LK L +I YN I G
Sbjct: 605 GFCQEGNMSHALQVL--VLMLKDGLLPNISVYNSFITG 640
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 164/361 (45%), Gaps = 13/361 (3%)
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 110
D + +++++ K G + + S P+ + I LC A +
Sbjct: 176 DAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVL 235
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV-------EGF--- 160
K++ G P FT+N++++ L + G AL++ +E+ + + V G+
Sbjct: 236 RKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQ 295
Query: 161 --VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
V KA ++F + + + P VTYT +IRG +A L +M D G+ P+ F
Sbjct: 296 REVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEF 355
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
N+++ L + +A L M G+ P+AF YN L+ C ++ A L+ M
Sbjct: 356 NMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNE 414
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
G + +Y L+ YC N ++ A+ LY EM KG P+VV Y TL ++
Sbjct: 415 TGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDK 474
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A+ L EM+++GV+ + +TY T I+GLC + E E+ + YN +I+
Sbjct: 475 AYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIIN 534
Query: 399 G 399
G
Sbjct: 535 G 535
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 117/245 (47%), Gaps = 25/245 (10%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + ++ K D L + + GL PD+ YN LI FC+ G +SH
Sbjct: 558 PPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQ 617
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
VL +L+ PN + S I G + EA L+ K+ G + + TY TLI+G
Sbjct: 618 VLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFS 677
Query: 134 RTGHTIVALNLFEEM-ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ G+ AL L+ EM A GN PD +T+T++ G C
Sbjct: 678 KDGNVTFALKLYSEMVAKGN------------------------IPDHITFTALTHGLCR 713
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
D ++A+ LL EM ++PNV+ +N++++ +NGK+ EA RL D M++ + P+
Sbjct: 714 NGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTT 773
Query: 253 YNTLM 257
Y+ L+
Sbjct: 774 YDILV 778
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 183/397 (46%), Gaps = 17/397 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++NIL L KN D L ++S G PD +Y LI+ CK+G+V
Sbjct: 179 PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA--- 235
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R L FTP+ + +LI G+C E EA L ++ G +PNV +Y T+IN L
Sbjct: 236 --RELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSD 293
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQ------------MKDENINPDVVT 182
G+ ++L + +M + + F K FL+ M E + P+VV
Sbjct: 294 AGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVA 353
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++ G C +A + +M G PNV T++ ++D K G +D AS + + MI
Sbjct: 354 YNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMI 413
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G PN Y ++D C N+A L +M+ C +++ I G C + ++
Sbjct: 414 THGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVD 473
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ ++ +M + G P+ YN L L + + AF L +M+ G+ + TY T I
Sbjct: 474 WAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTII 533
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G C + EA+EL + + + D N +ID
Sbjct: 534 YGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDA 570
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 183/386 (47%), Gaps = 28/386 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N + L + + ++ + G+ P+++TYNIL+ CK RV +
Sbjct: 144 PTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKL 203
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P+ V++T+LI LC ++ EA L P+V YN LING+ +
Sbjct: 204 LVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNALINGVCK 258
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
E ++A +L +M ++ I+P+V++YT++I A
Sbjct: 259 -----------------------EYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAG 295
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ + +L +M +G PN+ TF ++ G EA D MI+ GV PN YN
Sbjct: 296 NVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYN 355
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
LM G C + A +F ME GC V +YS LI+GY K +++GA ++ M++
Sbjct: 356 ALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITH 415
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G P+VV Y + VL +A+ L + MQ + +T T+ TFI GLC + + A
Sbjct: 416 GCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWA 475
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+++F + C + YN L+D L
Sbjct: 476 IKVFDQMGNSGCFPNTTTYNELLDSL 501
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 186/400 (46%), Gaps = 24/400 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F + D M+N + P V S+ + L+ + + L++ ++ + G P+L+T+ LI
Sbjct: 266 FQLLDEMMN-KGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIK 324
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
F G R++R PN V + +L+ GLC++ + +A ++F ++ + GC P
Sbjct: 325 GFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCP 384
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
NV TY+ LI+G + G +D A E++ M +P+V
Sbjct: 385 NVRTYSALIDGYAKAGD-----------------------LDGASEVWNWMITHGCHPNV 421
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
V YT ++ C + +N+A CL+ M + PN VTFN + LC +G++D A ++ D
Sbjct: 422 VAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQ 481
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M G PN YN L+D R A L ME G + +Y+ +I GYC
Sbjct: 482 MGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGM 541
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ AL L G+M+ +G KPD + N + + +V A +L D + D Y +
Sbjct: 542 LGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTS 601
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I G+C + + EA+ R + ++ +N L+ L
Sbjct: 602 LISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHL 641
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 127/282 (45%), Gaps = 40/282 (14%)
Query: 153 GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
G + G ++A + F +M+D + P V Y ++ N + + M G++
Sbjct: 119 GSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGME 178
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
PNV T+N+++ LCKN ++D A +LL M G P+ Y TL+ C G+V A+EL
Sbjct: 179 PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL 238
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
+M T +V Y+ LING CK E A L EM++KGI P+V+ Y T+ L +
Sbjct: 239 -----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSD 293
Query: 333 IHQVE-----------------------------------RAFKLFDEMQRDGVAADTWT 357
VE A +D M R+GV +
Sbjct: 294 AGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVA 353
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
Y + GLC + +AV +F + I C ++R Y+ LIDG
Sbjct: 354 YNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDG 395
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 103/249 (41%), Gaps = 30/249 (12%)
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+TY +I + + + LL +M +G+ + F ++ + G ++A +
Sbjct: 77 LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYR 136
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M V+P +YN ++D R ++ +M+ G VF+Y+IL+ CKN
Sbjct: 137 MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNR 196
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV------------------------ 336
++GA L EM SKG PD V Y TL L ++ +V
Sbjct: 197 VDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGV 256
Query: 337 ------ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
E AF+L DEM G+ + +Y T I+ L + ++ + + C ++
Sbjct: 257 CKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNL 316
Query: 391 RAYNCLIDG 399
+ LI G
Sbjct: 317 HTFTSLIKG 325
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 191/394 (48%), Gaps = 12/394 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V + NI+ L K+ D V + G++ DL TYN L+N +C+ G VS F ++
Sbjct: 224 VYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVD 283
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ P T+ +LI GLC E A + ++ G PN T+N ++ R
Sbjct: 284 CMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKE 343
Query: 137 HTIVALNLFEEM------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
A +F EM +S G F G + +A F +MK + PD V YT
Sbjct: 344 DVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYT 403
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+I G+C +D + A + EM+++G +VVT+N +++ LC+ +D+A L M++
Sbjct: 404 ILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVER 463
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
GV P+ + TL+ G+C G + +A LF +M V +Y+ L++G+CK E+E A
Sbjct: 464 GVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKA 523
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L+ +M+S+ I P + ++ L + V AF+L+DEM+ G+ T T I G
Sbjct: 524 KELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKG 583
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
+ + +A + T+ D YN LI+
Sbjct: 584 YLRAGNLSKANDFLNTMISEGVPPDCITYNTLIN 617
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 180/383 (46%), Gaps = 23/383 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V F++L + + F+ L G + N L+ K+G V + V
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++S N T ++ LC + ++ +++ G ++ TYNTL+N R G
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
A L + MA G G + P + TY ++I G C +
Sbjct: 274 LVSEAFGLVDCMA-GKG----------------------LKPGLFTYNALINGLCKEGSY 310
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
AK +L EM+ G+ PN TFN ++ E C+ + EA R+ + M+Q GV P+ ++++
Sbjct: 311 ERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSI 370
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ F G + RA F M+ +G Y+ILINGYC+N ++ GAL + EM+ +G
Sbjct: 371 VGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGC 430
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
DVV YNTL L ++ A +LF EM GV D +T T I G CK+ + +A+
Sbjct: 431 VMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALS 490
Query: 377 LFRTLRILKCELDIRAYNCLIDG 399
LF T+ + + D+ YN L+DG
Sbjct: 491 LFETMTLRSLKPDVVTYNTLMDG 513
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 186/364 (51%), Gaps = 13/364 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ ML R P + SF+ + G ++N L+ F+++ GL PD Y ILIN +
Sbjct: 351 VFNEMLQ-RGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGY 409
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ VS + ++ + VT+ +L+ GLC + +A LF ++ G P+
Sbjct: 410 CRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDF 469
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV-------EGF-----VDKAKELFLQ 170
+T TLI+G + G+ AL+LFE M + + V +GF ++KAKEL+
Sbjct: 470 YTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYD 529
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M I P ++++ +I GFC +EA L EM ++G++P +VT N I+ + G
Sbjct: 530 MISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGN 589
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ +A+ L+ MI GV P+ YNTL++ F +RA L +ME G + +Y+
Sbjct: 590 LSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNA 649
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
++ G+ ++ ++ A + +M+ KGI PD Y +L ++ AF++ DEM + G
Sbjct: 650 ILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRG 709
Query: 351 VAAD 354
D
Sbjct: 710 FVPD 713
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 182/397 (45%), Gaps = 12/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N L L K Y+ + + GL P+ T+N ++ C+ V V
Sbjct: 292 PGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERV 351
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+L+ P+ ++F+S++ + A A F K++ G P+ Y LING R
Sbjct: 352 FNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCR 411
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
AL + EM V + +D A ELF +M + + PD T
Sbjct: 412 NDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYT 471
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
T++I G+C + +A L M + ++P+VVT+N +MD CK G+M++A L MI
Sbjct: 472 LTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMI 531
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ P+ ++ L++GFC G V+ A L+ M+ G T+ + + +I GY + +
Sbjct: 532 SREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLS 591
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A M+S+G+ PD + YNTL + +RAF L + M+ G+ + TY +
Sbjct: 592 KANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAIL 651
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G ++ + EA + + D Y LI+G
Sbjct: 652 GGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLING 688
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 149/313 (47%), Gaps = 23/313 (7%)
Query: 88 VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
V F LI+ ++ E + F LR G ++ N L+ + + G +A ++E+
Sbjct: 155 VVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYED 214
Query: 148 MASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
+K NI +V T ++ C + L EM
Sbjct: 215 F----------------------VKSGNI-VNVYTLNIMVNALCKDGKLDNVGVYLSEME 251
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
++GV ++VT+N +++ C+ G + EA L+D M G++P F YN L++G C G
Sbjct: 252 EKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYE 311
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
RAK + M +G +++ ++ C+ +++ A ++ EML +G+ PD++ ++++
Sbjct: 312 RAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIV 371
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
V ++ RA F++M+ G+ DT Y I+G C+N + A+++ + C
Sbjct: 372 GVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCV 431
Query: 388 LDIRAYNCLIDGL 400
+D+ YN L++GL
Sbjct: 432 MDVVTYNTLLNGL 444
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 201/400 (50%), Gaps = 18/400 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++++ L K + D + K ++ G P+ YN LI+ +CKMG +S +
Sbjct: 324 PSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKI 383
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+L +PN+VT SLI+G C +I +A + ++ G N +++ +IN L
Sbjct: 384 RDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCL 443
Query: 135 TGHTIVALNLFEEM---------------ASGNGEFGVEGFVDKAKELFLQMKDENINPD 179
+ AL+ EM SG + G +G +A EL+ ++ + P+
Sbjct: 444 KFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQG---EAVELWCRLLGKGFVPN 500
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
+VT ++I G C A + E LL +M+++G+ + +T+N ++ CK GK+ E L +
Sbjct: 501 IVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKE 560
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M++ G++P+ + +N L+ G C +++ A L+ + G V++Y ++I+GYCK
Sbjct: 561 EMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKAN 620
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++E +L E++SK ++ + V+YN+L + AF+L D+M+ GV TY
Sbjct: 621 KVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYS 680
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + GLC + +A L +R ++ Y +I G
Sbjct: 681 SLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGG 720
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/350 (32%), Positives = 168/350 (48%), Gaps = 23/350 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + N L L K + L L + + GL D TYN LI+ CK G+V GF +
Sbjct: 499 PNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFEL 558
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ P+ TF L+ GLC +I EA+ L+ + + G PNV+TY +I+G +
Sbjct: 559 KEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCK 618
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
NL E+ S E + V Y S+IR +C
Sbjct: 619 ANKVEEGENLLNELVSKKLEL-----------------------NSVVYNSLIRAYCING 655
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ N A L +M +GV + T++ +M LC G +D+A LLD M + G+ PN Y
Sbjct: 656 NMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYT 715
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
T++ G+ G++N+ + M S F+Y+I+I+G+CK + + A L EM K
Sbjct: 716 TIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEK 775
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
GI PD V YN L + +VE AFK+ DEM V D TY T IDG
Sbjct: 776 GILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDG 825
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 190/418 (45%), Gaps = 58/418 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V F+ + K D + LF ++ G+ P++ TYN +I+ CK GR+ +
Sbjct: 254 PDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRF 313
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++++ +P+ +T++ I GL +I EA + ++ G PN YNTLI+G +
Sbjct: 314 KEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCK 373
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G+ AL + ++M S + I+P+ VT S+I+GFC ++
Sbjct: 374 MGNISEALKIRDDMLS-----------------------KGISPNSVTLNSLIQGFCKSD 410
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMD------------------------------- 223
+A+ +L EM+ +G+ N +F+++++
Sbjct: 411 QIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLT 470
Query: 224 ----ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
LCK GK EA L ++ G PN N L+ G C G + +L M
Sbjct: 471 TLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLER 530
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G +Y+ LI+G CK +++ L EM+ KGI+PD+ +N L L +++ A
Sbjct: 531 GLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEA 590
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+L+ E +++G + +TY IDG CK + + E L L K EL+ YN LI
Sbjct: 591 SRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLI 648
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 178/401 (44%), Gaps = 12/401 (2%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P SF+++ L + T L + + L P+ L++ CK G+
Sbjct: 425 RGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGE 484
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ R+L F PN VT +LI GLC + E L + G + TYNTLI+
Sbjct: 485 AVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLIS 544
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINP 178
G + G L EEM + + F +D+A L+ + K P
Sbjct: 545 GCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVP 604
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
+V TY +I G+C AN E + LL E++ + ++ N V +N ++ C NG M+ A RL
Sbjct: 605 NVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLR 664
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
D M GV + Y++LM G C G V+ AK L M G V Y+ +I GY K
Sbjct: 665 DDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKL 724
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
++ + EM S I P+ Y + ++ + + A KL +EM G+ D TY
Sbjct: 725 GQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTY 784
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
F +GLCK + EA ++ + LD Y LIDG
Sbjct: 785 NAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDG 825
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 189/410 (46%), Gaps = 13/410 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
I D ML+ SP V + N L K+ ++ + + GL + +++++IN
Sbjct: 383 IRDDMLSKGISPNSV-TLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWL 441
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C R + +L PN T+L+ GLC + EA L+ +L G PN+
Sbjct: 442 CLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNI 501
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG------------VEGFVDKAKELFLQ 170
T N LI+GL + G+ L L +M F EG V + EL +
Sbjct: 502 VTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEE 561
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + I PD+ T+ ++ G C A+ +EA L E G PNV T+ V++D CK K
Sbjct: 562 MVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANK 621
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
++E LL+ ++ + N+ VYN+L+ +C+ G +N A L M+S G + +YS
Sbjct: 622 VEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSS 681
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L++G C ++ A L EM +G+ P+VV Y T+ ++ Q+ + + EM
Sbjct: 682 LMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHN 741
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + +TY IDG CK EA +L + D YN +GL
Sbjct: 742 IHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGL 791
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 172/397 (43%), Gaps = 58/397 (14%)
Query: 39 LFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 98
+F L GLFP L T L++ K + + V I P+ F+++I C
Sbjct: 208 VFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFC 267
Query: 99 AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE 158
R +A LF+K+ G PNV TYN +I+GL ++G
Sbjct: 268 KGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGR--------------------- 306
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
+D+A +M E ++P ++TY+ I G +EA C+L EM + G PN V +
Sbjct: 307 --LDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVY 364
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
N ++D CK G + EA ++ D M+ G+ PN+ N+L+ GFC + ++ +A+ + M
Sbjct: 365 NTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIG 424
Query: 279 MGCTHTVFSYSILIN-----------------------------------GYCKNKEIEG 303
G S+S++IN G CK +
Sbjct: 425 RGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGE 484
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A+ L+ +L KG P++V N L L + ++ KL +M G+ D TY T I
Sbjct: 485 AVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLIS 544
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G CK + E EL + + DI +N L+ GL
Sbjct: 545 GCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGL 581
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 66/132 (50%)
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
A ++F + G ++ + + L++ K E++ + +Y + GI PDV +++T+
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264
Query: 329 VLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
+ H+ + A LF +M++ GVA + TY I GLCK+ + EA + K
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP 324
Query: 389 DIRAYNCLIDGL 400
+ Y+ I+GL
Sbjct: 325 SLITYSVFINGL 336
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 172/349 (49%), Gaps = 23/349 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++ +L + + LF+ + G+ D+Y Y +I+C C+ G V V+
Sbjct: 299 VVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFD 358
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ P+A T+ +LI G+C ++ A L +++ G + N +NTLI+G +G
Sbjct: 359 EMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESG 418
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
VD+A L + M+ + + DV Y S+ G C N
Sbjct: 419 -----------------------MVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRK 455
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+EAK LL M+++GV PN ++F ++D CK G EA R+ M + G PN YN L
Sbjct: 456 DEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVL 515
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG+ G + A +L +E+ G V++ + LI+G C + +++ AL L+ EM +G+
Sbjct: 516 IDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGL 575
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
P+VV Y + L + + E AFKL+DEM+ G+ D Y + + L
Sbjct: 576 VPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 182/387 (47%), Gaps = 12/387 (3%)
Query: 26 CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTP 85
L + D+ L F+R+ + + +Y+ I+++ CK G V G ++ +
Sbjct: 203 ALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKA 262
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
N VT+ + I+G + A + T + G NV TY LI+G G A LF
Sbjct: 263 NVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLF 322
Query: 146 EEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
EEM E V G V +A LF +M D+ + P TY ++I G C A
Sbjct: 323 EEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKA 382
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
A+ L+ EM +G+ N V FN ++D C++G +DEA RL +M + G+ + F Y
Sbjct: 383 GQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAY 442
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N++ G C R + AK L SM G + S++ LI+ YCK A ++ EM
Sbjct: 443 NSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEE 502
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG P+++ YN L + ++ A KL DE++ G+ D +T + I G C + +
Sbjct: 503 KGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDM 562
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A++LF + ++ Y +I GL
Sbjct: 563 ALKLFDEMPQRGLVPNVVTYTAMISGL 589
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 128/261 (49%), Gaps = 30/261 (11%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FN L ++ D L L + GL D++ YN + + CK+ R +L ++
Sbjct: 407 FNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMV 466
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+PN ++FT+LI C E +EA +F ++ G PN+ TYN LI+G + G+
Sbjct: 467 ERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGN-- 524
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
+ +A +L ++++ + PDV T TS+I G C + A
Sbjct: 525 ---------------------MKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMA 563
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
L EM +G+ PNVVT+ ++ L K+G+ +EA +L D M + G+ P+ VY++L+
Sbjct: 564 LKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV-- 621
Query: 260 FCLTGRVNRAKELFVSMESMG 280
G ++ A E +SM+ G
Sbjct: 622 ----GSLHSADE-SISMQIQG 637
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 84/202 (41%), Gaps = 30/202 (14%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P SF L K ++ +F+ + G P++ TYN+LI+ + K G +
Sbjct: 468 RGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKE 527
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ + P+ T TSLI G C + ++ A LF ++ G PNV TY +I+
Sbjct: 528 AHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMIS 587
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
GL + G + A L++E MK+ + PD Y+S++
Sbjct: 588 GLSKDGRSEEAFKLYDE-----------------------MKETGLTPDDTVYSSLVGSL 624
Query: 191 CYANDWNEAKCLLIEMMDQGVQ 212
A++ I M QG Q
Sbjct: 625 HSADES-------ISMQIQGSQ 639
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 88/234 (37%), Gaps = 59/234 (25%)
Query: 223 DELCKNGKMDEASRLLD-LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK----------- 270
D+L K+ K E L + + G+R V +L+D C + NRAK
Sbjct: 108 DKLHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASLVDDACNESKCNRAKFKEKFFDLLFR 167
Query: 271 ------------ELFVSMESMG-----------------------CTH------------ 283
E F ME G C
Sbjct: 168 VYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEV 227
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
TV+S +I+++G CK ++E L E+ +KG+K +VV YN F+ + ++
Sbjct: 228 TVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEIL 287
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
M+++GVA + TY I G I EA LF +R E D+ Y +I
Sbjct: 288 TLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSII 341
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 194/414 (46%), Gaps = 29/414 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M + PP + I+ L + K D V L + +G PD T N L++ F
Sbjct: 223 MFDEM-TQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGF 281
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK+G++ F +L + + ++SLI GL R E K+ G EP+V
Sbjct: 282 CKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDV 341
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
Y LI G G ALN+ +M F G +DKA+ L L+
Sbjct: 342 VLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLE 401
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ + P TYT +I G C +EA+ + +M + G P+++TFN ++D LCK G+
Sbjct: 402 ISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGE 461
Query: 231 MDEASRLLDLMIQIGVRPNAFV--------------YNTLMDGFCLTGRVNRAKELFVSM 276
++EA L M +IG P+ F+ T+++ C +G + +A +L + +
Sbjct: 462 LEEARHLFYKM-EIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQL 520
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
G + +Y++LING+CK K I GA L+ E+ KG PD V Y TL + +
Sbjct: 521 ADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDRE 580
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF-RTLRILKCELD 389
E AF++ D+M ++G + Y+ + C+ + A L+ + LR L + D
Sbjct: 581 EDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQED 634
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 197/446 (44%), Gaps = 62/446 (13%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYN----------------- 56
PPP +F++L AK+ + + F ++ G PD++TYN
Sbjct: 130 PPP--TFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALA 187
Query: 57 ------------------ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 98
IL+N CK G+ + + + PN + +T ++ GLC
Sbjct: 188 VYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLC 247
Query: 99 AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE 158
R + L ++V GC P+ T N L++G + G A L + G++
Sbjct: 248 QAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIK 307
Query: 159 GFV------------DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
G+ D+ +E +M I PDVV YT +IRGFC + A +L +M
Sbjct: 308 GYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDM 367
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+G+ P+ +N ++ C G +D+A L + + P + Y L+ G C G +
Sbjct: 368 TQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLL 427
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM-----------LSKG 315
+ A+++F ME++GC+ ++ +++ LI+G CK E+E A L+ +M LS+G
Sbjct: 428 DEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQG 487
Query: 316 IKP--DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
D T+ L E + +A+KL ++ GV D TY I+G CK I
Sbjct: 488 ADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNING 547
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
A +LFR L++ D Y LIDG
Sbjct: 548 AFKLFRELQLKGHSPDSVTYGTLIDG 573
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 179/382 (46%), Gaps = 23/382 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+ N++ LAK+ +DT + + L ++ + T+++LI + K G G++
Sbjct: 98 THNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKM 157
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
P+ T+ S++ + + + A A++ ++ PN T+ L+NGL + G T
Sbjct: 158 KDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKT 217
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
AL +F+EM + I P+ + YT ++ G C A ++
Sbjct: 218 DDALKMFDEMTQ-----------------------KGIPPNTMIYTIILSGLCQAKRTDD 254
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
LL M G P+ +T N ++D CK G++DEA LL L + G Y++L+D
Sbjct: 255 VHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLID 314
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G R + +E M G V Y+ILI G+C+ ++ AL++ +M +G+ P
Sbjct: 315 GLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSP 374
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
D YN L ++ +++A L E+ ++ + TY I G+C+N + EA ++F
Sbjct: 375 DTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIF 434
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
+ L C I +N LIDGL
Sbjct: 435 NQMENLGCSPSIMTFNALIDGL 456
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 194/393 (49%), Gaps = 25/393 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + IL + D L++ + GL PD Y YN LI FC +G + +
Sbjct: 339 PDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSL 398
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
I ++ P + T+T LI G+C + EA +F ++ GC P++ T+N LI+GL +
Sbjct: 399 QLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCK 458
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQM-KDENINPDVVTYTSVIRGFCYA 193
G A +LF +M G K LFL++ + + D + +++ C +
Sbjct: 459 AGELEEARHLFYKMEIG-----------KNPSLFLRLSQGADRVMDTASLQTMVERLCES 507
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+A LL+++ D GV P+++T+NV+++ CK ++ A +L + G P++ Y
Sbjct: 508 GLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTY 567
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESM---GCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
TL+DGF RV+R ++ F ++ M GCT + Y L+ C+ ++ A SL+ +
Sbjct: 568 GTLIDGF---HRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLK 624
Query: 311 ML-SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
L S + D + L FE ++E+A + EM + Y ++ GLC+
Sbjct: 625 YLRSLPSQEDETL--KLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQAR 682
Query: 370 YIVEAVELFRTLRILKCELDIRAYNC--LIDGL 400
EA+++F L+ +C++D+ +C LI+GL
Sbjct: 683 RSEEALKIFLVLK--ECQMDVNPPSCVMLINGL 713
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 11/254 (4%)
Query: 38 SLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 97
L +L +G+ PD+ TYN+LIN FCK ++ F + + +P++VT+ +LI G
Sbjct: 515 KLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGF 574
Query: 98 CAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF-----------E 146
R +A + ++ GC P+ Y L+ R G VA +L+ +
Sbjct: 575 HRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQED 634
Query: 147 EMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
E E +G ++KA L+M + N ++ YT + G C A EA + + +
Sbjct: 635 ETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVL 694
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+ + N + ++++ LCK+G ++ A + ++ G + N L+ L ++
Sbjct: 695 KECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKM 754
Query: 267 NRAKELFVSMESMG 280
A +L M S G
Sbjct: 755 KHALDLLNRMNSAG 768
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 188/390 (48%), Gaps = 31/390 (7%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FN L + + +FK + G+ P + T+N L++ K GR S + +L
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227
Query: 80 RS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ TP+ TF LI+G C S + E F ++ F C+P+V TYNTL++GL R G
Sbjct: 228 DTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKV 287
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+A N+ V+G V K+ N++P+VVTYT++IRG+C D E
Sbjct: 288 KIAHNV------------VKGMVKKS---------PNLSPNVVTYTTLIRGYCMKQDMAE 326
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI-QIGVRPNAFVYNTLM 257
A LL EM+ +G++PN +T+N ++ LC+ K+D+ +L+ M+ G P+ NTL+
Sbjct: 327 ALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLI 386
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK--- 314
C G++ A +F M + +YS+L+ C+ + A + E+ K
Sbjct: 387 KAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEIL 446
Query: 315 ----GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
G KP V YN +F L + ++A ++F ++ + G D +Y+T I G C+
Sbjct: 447 LHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGT-QDPPSYKTLILGHCREGT 505
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+L + D Y +IDGL
Sbjct: 506 PEAGFDLLVLMLRRDFVPDAETYGLMIDGL 535
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 173/404 (42%), Gaps = 36/404 (8%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD ML+ P +FNIL N D FK ++ PD+ TYN L++
Sbjct: 222 LFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGL 281
Query: 63 CKMGRVSHGF-VVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C+ G+V VV G + +S +PN VT+T+LI+G C + + EA +L ++ G +P
Sbjct: 282 CRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKP 341
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQM-KDENINPD 179
N TYNTLI GL +DK KE+ M D PD
Sbjct: 342 NKITYNTLIQGLCEAQK-----------------------LDKIKEILEGMVGDGGFIPD 378
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
T ++I+ C EA + +M + VQP+ T++V++ LC+ G A D
Sbjct: 379 TCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFD 438
Query: 240 -------LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
L+ +G +P YN + + C G+ +A+ +F + G T SY LI
Sbjct: 439 ELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRG-TQDPPSYKTLI 497
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
G+C+ E L ML + PD Y + L + A K ++M +
Sbjct: 498 LGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHL 557
Query: 353 ADTWTYRTFIDGLCKNSYIVEAVELFRTL--RILKCELDIRAYN 394
T + + + L + E+ L + + R ++ +D+ +
Sbjct: 558 PTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHT 601
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 149/356 (41%), Gaps = 22/356 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLF-PDLYTYNILINCFCKMGRVSHGFV 73
P ++N L L + + D + + + + G F PD T N LI C MG++ F
Sbjct: 341 PNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFS 400
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-------RVFGCEPNVFTYN 126
V ++ P++ T++ L++ LC A F +L GC+P V YN
Sbjct: 401 VFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYN 460
Query: 127 TLINGLYRTGHTIVALNLFEE-MASGNGEFGV----------EGFVDKAKELFLQMKDEN 175
+ L G T A +F + M G + EG + +L + M +
Sbjct: 461 PMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRD 520
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
PD TY +I G D A L +M+ P F+ I+ L + G E++
Sbjct: 521 FVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESA 580
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
L+ LM++ +R N + + +G ++A F+++ + + L++
Sbjct: 581 SLVKLMLERRIRQNIDLSTHTVRLLYKSGLQDKA---FMTIGLLYENGYLVKMEELVSFL 637
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
C+++++ A + L K D+ + +T+ L + H+V AF L+ E+ G+
Sbjct: 638 CQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGM 693
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 102/264 (38%), Gaps = 45/264 (17%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N +F L N +F++L G D +Y LI C+ G GF +
Sbjct: 454 PLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGT-QDPPSYKTLILGHCREGTPEAGFDL 512
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +LR F P+A T+ +I GL + + A K+ P +++++ L
Sbjct: 513 LVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVE 572
Query: 135 TG--HTIVALN--LFEEMASGNGEFGVE--------GFVDKA------------------ 164
G H +L + E N + G DKA
Sbjct: 573 KGCAHESASLVKLMLERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYENGYLVKMEE 632
Query: 165 --------------KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG 210
+++ L ++ + D+ ++VI G C A+ +EA L E++++G
Sbjct: 633 LVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKG 692
Query: 211 VQPNVVTFNVIMDELCKNGKMDEA 234
+Q + + L G+++EA
Sbjct: 693 MQHRLTCQEDLRISLEAEGRLNEA 716
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 166/353 (47%), Gaps = 23/353 (6%)
Query: 29 KNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 88
K Y + L + G PD+ TYN+++N C+ GRV L + PN V
Sbjct: 4 KRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTV 63
Query: 89 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM 148
++ ++KGLC R +A L ++ GC PNV T+N LI+ L R
Sbjct: 64 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCR-------------- 109
Query: 149 ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD 208
+G V+ A E+ Q+ P+ ++Y ++ FC ++A L M+
Sbjct: 110 ---------KGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 160
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
+G P++V++N ++ LC++G++D A LL + G P YNT++DG G+
Sbjct: 161 RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKE 220
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
A EL M S G + +YS + G C+ IE A+ +G++ GI+P+ V+YN + +
Sbjct: 221 ALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIIL 280
Query: 329 VLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
L + + A LF M +G + TY I+GL I EA +L L
Sbjct: 281 GLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 333
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 158/338 (46%), Gaps = 58/338 (17%)
Query: 98 CAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV 157
C S +A L ++R GC P++ TYN ++NG+ +
Sbjct: 3 CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ----------------------- 39
Query: 158 EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
EG VD A E + P+ V+Y V++G C A W +A+ L+ EM +G PNVVT
Sbjct: 40 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 99
Query: 218 FNVIMDELCKNG-----------------------------------KMDEASRLLDLMI 242
FN+++ LC+ G KMD+A LDLM+
Sbjct: 100 FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 159
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G P+ YNTL+ C +G V+ A EL ++ GC + SY+ +I+G K + +
Sbjct: 160 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTK 219
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL L EM+SKG++PD++ Y+T+ L ++E A + F ++Q G+ +T Y I
Sbjct: 220 EALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAII 279
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GLCK A++LF + C + Y LI+GL
Sbjct: 280 LGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 317
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 151/302 (50%), Gaps = 23/302 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S+NI+ L + ++ L + G P++ T+N+LI+ C+ G V V
Sbjct: 60 PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEV 119
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +I + TPN++++ L+ C + ++ +A A + GC P++ +YNTL+ L R
Sbjct: 120 LEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCR 179
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+G VD A EL Q+KD+ P +++Y +VI G A
Sbjct: 180 SGE-----------------------VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAG 216
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EA LL EM+ +G+QP+++T++ I LC+ ++++A R + +G+RPN +YN
Sbjct: 217 KTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYN 276
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
++ G C + A +LF M GC +Y+ILI G I+ A L E+ S+
Sbjct: 277 AIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSR 336
Query: 315 GI 316
G+
Sbjct: 337 GV 338
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 135/288 (46%), Gaps = 29/288 (10%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ + PP V +FN+L L + + L + +++ G P+ +YN L++ FCK +
Sbjct: 88 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKK 147
Query: 68 VSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ L ++ R C+ P+ V++ +L+ LC + A L +L+ GC P + +YN
Sbjct: 148 MDKAMAFLDLMVSRGCY-PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYN 206
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
T+I+GL + G T AL L EM S + + PD++TY+++
Sbjct: 207 TVIDGLTKAGKTKEALELLNEMVS-----------------------KGLQPDIITYSTI 243
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
G C + +A ++ D G++PN V +N I+ LCK + A L MI G
Sbjct: 244 AAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGC 303
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
PN Y L++G G + A++L + C+ V S++ G
Sbjct: 304 MPNESTYTILIEGLAYEGLIKEARDLLDEL----CSRGVVRKSLINKG 347
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 63/145 (43%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
+ L + P + S+N + L K L L + S GL PD+ TY+ + C+
Sbjct: 191 HQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCRE 250
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
R+ G++ PN V + ++I GLC A LF + GC PN TY
Sbjct: 251 DRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTY 310
Query: 126 NTLINGLYRTGHTIVALNLFEEMAS 150
LI GL G A +L +E+ S
Sbjct: 311 TILIEGLAYEGLIKEARDLLDELCS 335
>gi|26449752|dbj|BAC41999.1| unknown protein [Arabidopsis thaliana]
Length = 593
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 193/385 (50%), Gaps = 20/385 (5%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
D L L K++ +G+ P L T+N L+N CK G + ++ + +PN V++ +L
Sbjct: 138 DAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTL 197
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALN---LFEEM-- 148
IKGLC+ + + +A LF + +G PN T N +++ L + G ++ N L EE+
Sbjct: 198 IKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKG--VIGNNNKKLLEEILD 255
Query: 149 -ASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
+ N + G V +A E++ +M +N+ D V Y +IRG C + +
Sbjct: 256 SSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGN 315
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
A + +M+ +GV P+V T+N ++ LCK GK DEA L M GV P+ Y
Sbjct: 316 MVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKV 375
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
++ G C+ G VNRA E +SM V ++++I+GY + + ALS+ MLS G
Sbjct: 376 IIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYG 435
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+KP+V N L + ++ A+ + +EM+ + DT TY + C ++ A
Sbjct: 436 VKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAF 495
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
+L+ + C+ DI Y L+ GL
Sbjct: 496 QLYDEMLRRGCQPDIITYTELVRGL 520
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 169/397 (42%), Gaps = 65/397 (16%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M M PSP V S+N L L + D L LF +N G+ P+ T NI+++ C+ G
Sbjct: 182 MREMGPSPNCV-SYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKG 240
Query: 67 RVSHG-------------------FVVLGRILRSCFT--------------------PNA 87
+ + V+ ++ SCF ++
Sbjct: 241 VIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADS 300
Query: 88 VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
V + +I+GLC+ ++ A + G P+VFTYNTLI+ L + G A +L
Sbjct: 301 VVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGT 360
Query: 148 MASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M +G + G V++A E L M ++ P+V+ + VI G+ D
Sbjct: 361 MQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGD 420
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
+ A +L M+ GV+PNV T N ++ K G++ +A + + M + P+ YN
Sbjct: 421 TSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNL 480
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L+ C G + A +L+ M GC + +Y+ L+ G C ++ A SL + + G
Sbjct: 481 LLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATG 540
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
I D V F++L K + +QR G A
Sbjct: 541 ITIDHVP----FLIL---------AKKYTRLQRPGEA 564
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 120/267 (44%), Gaps = 23/267 (8%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G+ PD++TYN LI+ CK G+ + G + P+ +++ +I+GLC + A
Sbjct: 330 GVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRA 389
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKE 166
+ P V +N +I+G R G T AL++ M S +GV+
Sbjct: 390 NEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLS----YGVK-------- 437
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
P+V T ++I G+ +A + EM + P+ T+N+++ C
Sbjct: 438 -----------PNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAAC 486
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
G + A +L D M++ G +P+ Y L+ G C GR+ +A+ L +++ G T
Sbjct: 487 TLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHV 546
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLS 313
+ IL Y + + A +Y + L+
Sbjct: 547 PFLILAKKYTRLQRPGEAYLVYKKWLA 573
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 117/248 (47%), Gaps = 4/248 (1%)
Query: 157 VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
++G +D A L +M + P ++T+ ++ G C A +A L+ EM + G PN V
Sbjct: 133 LQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCV 192
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV-NRAKELF-- 273
++N ++ LC +D+A L + M + G+RPN N ++ C G + N K+L
Sbjct: 193 SYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEE 252
Query: 274 -VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
+ + +IL++ KN + AL ++ EM K + D V+YN + L
Sbjct: 253 ILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCS 312
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
+ A+ +M + GV D +TY T I LCK EA +L T++ D +
Sbjct: 313 SGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQIS 372
Query: 393 YNCLIDGL 400
Y +I GL
Sbjct: 373 YKVIIQGL 380
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 87/219 (39%), Gaps = 39/219 (17%)
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
IM +LC GK+D A L MI GV P +N L++G C G + +A L M MG
Sbjct: 127 IMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMG 186
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP---------------------- 318
+ SY+ LI G C ++ AL L+ M GI+P
Sbjct: 187 PSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNN 246
Query: 319 -----------------DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
D+VI L F+ V +A +++ EM + V AD+ Y
Sbjct: 247 KKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVI 306
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I GLC + +V A + D+ YN LI L
Sbjct: 307 IRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISAL 345
>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 178/398 (44%), Gaps = 23/398 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FDYM P L +A+ +D V L + + + + YN L++
Sbjct: 95 VFDYM-GSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEVQGKEVRINSFVYNNLLSVL 153
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K +V + L P+ TF LI+GLC + A +F + FGC P+V
Sbjct: 154 VKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDV 213
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TYNTLINGL + LF+E+ S + +PD+VT
Sbjct: 214 VTYNTLINGLCKANEVQRGCELFKEIQS----------------------RSDCSPDIVT 251
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YTS+I GFC + EA L EMM G+QPNV+TFNV++D K G + EA + M
Sbjct: 252 YTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMA 311
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ + +L+DG+C G+VN + + M++ + TV++Y++LIN CK +
Sbjct: 312 YFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLN 371
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A G++ + I P +YN + + V+ + EM+ D T+ I
Sbjct: 372 EARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILI 431
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G C + EA+ +F + +C D N LI L
Sbjct: 432 IGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCL 469
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 164/331 (49%), Gaps = 24/331 (7%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
SPP +FNIL L + D +FK + S G PD+ TYN LIN CK V G
Sbjct: 174 SPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGC 233
Query: 73 VVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
+ I RS +P+ VT+TS+I G C ++ EA+ LF ++ G +PNV T+N LI+G
Sbjct: 234 ELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDG 293
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
FG G + +A+ ++ +M + + DVVT+TS+I G+C
Sbjct: 294 -----------------------FGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYC 330
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
A N M + V P V T+ V+++ LCK +++EA L + + P F
Sbjct: 331 RAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPF 390
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
+YN ++DGFC G V+ + ME C +++ILI G+C + A++++ M
Sbjct: 391 MYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRM 450
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
L+ PD + N+L L + A+++
Sbjct: 451 LATRCAPDNITVNSLISCLLKAGMPNEAYRI 481
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 136/277 (49%), Gaps = 24/277 (8%)
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
TYN L+ L + GH + +F+ M S +G + +K L +VT+
Sbjct: 75 TYNLLMRSLCQMGHHDLVNIVFDYMGS-------DGHLPDSKLLGF----------LVTW 117
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
+ A+D++ K LL E+ + V+ N +N ++ L K ++ EA L +
Sbjct: 118 MA------QASDFDMVKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLV 171
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
+ P+ + +N L+ G C G V+RA E+F MES GC V +Y+ LING CK E++
Sbjct: 172 MQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQR 231
Query: 304 ALSLYGEMLSKG-IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
L+ E+ S+ PD+V Y ++ + +++ A LF+EM R G+ + T+ I
Sbjct: 232 GCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLI 291
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
DG K I EA ++R + C D+ + LIDG
Sbjct: 292 DGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDG 328
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 107/227 (47%), Gaps = 1/227 (0%)
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
N+N TY ++R C + + M G P+ ++ + + D
Sbjct: 68 NVNHCYSTYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMV 127
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+LL + VR N+FVYN L+ +V+ A LF M ++++ILI G
Sbjct: 128 KKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRG 187
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ-RDGVAA 353
C+ ++ A ++ +M S G PDVV YNTL L + ++V+R +LF E+Q R +
Sbjct: 188 LCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSP 247
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D TY + I G CK+ + EA LF + + ++ +N LIDG
Sbjct: 248 DIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGF 294
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 116/277 (41%), Gaps = 48/277 (17%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNS-TGLFPDLYTYNILINCFCKMGRVSHGFV 73
P V ++N L L K LFK + S + PD+ TY +I+ FCK G++
Sbjct: 211 PDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASN 270
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ ++RS PN +TF LI G I EA A++ K+ F C +V T+ +LI+G
Sbjct: 271 LFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYC 330
Query: 134 RTGHTIVALNLFEEMASGN----------------------------GEFG--------- 156
R G L + M + N G+
Sbjct: 331 RAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPF 390
Query: 157 -----VEGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
++GF VD+ + +M+++ +PD VT+T +I G C EA + M
Sbjct: 391 MYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRM 450
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
+ P+ +T N ++ L K G +EA R+ + ++
Sbjct: 451 LATRCAPDNITVNSLISCLLKAGMPNEAYRIRKMALE 487
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 1/157 (0%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F ++ R P V ++ +L L K + ++ ++ + P + YN +I+ FC
Sbjct: 341 FWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFC 400
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K G V G V+L + P+ VTFT LI G C + R+ EA +F ++ C P+
Sbjct: 401 KAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRMLATRCAPDNI 460
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF 160
T N+LI+ L + G A + +MA + G+ F
Sbjct: 461 TVNSLISCLLKAGMPNEAYRI-RKMALEDRNLGLSSF 496
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 74/185 (40%), Gaps = 39/185 (21%)
Query: 255 TLMDGFCLTGRVNRAKELFVSME----SMGCTHTVFSYSILINGYCK------------- 297
T + F + R N K F +E ++ H +Y++L+ C+
Sbjct: 39 TPLIAFEVIKRFNNPKVGFKFLEFSRLNLNVNHCYSTYNLLMRSLCQMGHHDLVNIVFDY 98
Query: 298 --------NKEIEGAL--------------SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
+ ++ G L L E+ K ++ + +YN L VL + +Q
Sbjct: 99 MGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQ 158
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
V A LF E DTWT+ I GLC+ + A E+F+ + C D+ YN
Sbjct: 159 VHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNT 218
Query: 396 LIDGL 400
LI+GL
Sbjct: 219 LINGL 223
>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
Length = 1302
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 194/393 (49%), Gaps = 16/393 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNIL-FGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
+FD M ++R P S+ ++ GC K + L + G PD T +++
Sbjct: 805 VFDEM-SVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQR-GFIPDNATCTLILTA 862
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
C+ G V+ +++ F PN + FTSLI GLC + I +A + ++ G +PN
Sbjct: 863 LCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPN 922
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGN-------------GEFGVEGFVDKAKELF 168
V+T+ LI+GL + G T A LF ++ + G + E +++A+ LF
Sbjct: 923 VYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLF 982
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+MK++ + P+V TYT++I G C A + A L+ M D+G PN+ T+N +D LCK
Sbjct: 983 SRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKK 1042
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
+ EA LL+ G+ + Y L+ C +N+A F M G +
Sbjct: 1043 SRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLN 1102
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ILI +C+ K+++ + L+ ++S G+ P Y ++ + ++ A K F M+R
Sbjct: 1103 NILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKR 1162
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
G D++TY + I GLCK S + EA +L+ +
Sbjct: 1163 HGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 1195
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 175/389 (44%), Gaps = 34/389 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +F L L K + + + G P++YT+ LI+ CK G F +
Sbjct: 886 PNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRL 945
Query: 75 LGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+++RS + PN T+TS+I G C E ++ A LF++++ G PNV TY TLING
Sbjct: 946 FLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC 1005
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVD-------------------KAKELFLQMKDE 174
+ G A L M G EGF+ +A EL +
Sbjct: 1006 KAGSFGRAYELMNLM-------GDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSC 1058
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
+ D VTYT +I+ C ND N+A M G + ++ N+++ C+ KM E+
Sbjct: 1059 GLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 1118
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
RL L++ +G+ P Y +++ +C G ++ A + F +M+ GC F+Y LI+G
Sbjct: 1119 ERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISG 1178
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
CK ++ A LY M+ +G+ P V TL + + A L + + +
Sbjct: 1179 LCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDK-----K 1233
Query: 355 TW--TYRTFIDGLCKNSYIVEAVELFRTL 381
W T RT + LC + A F+ L
Sbjct: 1234 LWIRTVRTLVRKLCSEKKVGVAALFFQKL 1262
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 163/353 (46%), Gaps = 13/353 (3%)
Query: 58 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 117
++ F ++GR++ ++ + TP+++T +++ I A +F ++ V G
Sbjct: 754 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 813
Query: 118 CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAK 165
P+ +Y ++ G +R G A M G V++A
Sbjct: 814 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 873
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
F +M D P+++ +TS+I G C +A +L EM+ G +PNV T ++D L
Sbjct: 874 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 933
Query: 226 CKNGKMDEASRL-LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
CK G ++A RL L L+ +PN Y +++ G+C ++NRA+ LF M+ G
Sbjct: 934 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 993
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
V +Y+ LING+CK A L M +G P++ YN L + + A++L +
Sbjct: 994 VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 1053
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ G+ AD TY I CK + I +A+ F + E D+R N LI
Sbjct: 1054 KAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILI 1106
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 120/249 (48%), Gaps = 2/249 (0%)
Query: 154 EFGVE-GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
E VE G ++ A+ +F +M + PD +Y ++ G EA L M+ +G
Sbjct: 791 EIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFI 850
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
P+ T +I+ LC+NG ++ A MI +G +PN + +L+DG C G + +A E+
Sbjct: 851 PDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEM 910
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML-SKGIKPDVVIYNTLFVVLF 331
M G V++++ LI+G CK E A L+ +++ S KP+V Y ++
Sbjct: 911 LEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYC 970
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIR 391
+ ++ RA LF M+ G+ + TY T I+G CK A EL + +I
Sbjct: 971 KEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIY 1030
Query: 392 AYNCLIDGL 400
YN ID L
Sbjct: 1031 TYNAAIDSL 1039
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 131/319 (41%), Gaps = 15/319 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + G K + LF R+ GLFP++ TY LIN CK G + +
Sbjct: 957 PNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYEL 1016
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + F PN T+ + I LC +SR EA L K G E + TY LI +
Sbjct: 1017 MNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCK 1076
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
AL F M E F + + +++ LF + + P T
Sbjct: 1077 QNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKET 1136
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YTS+I +C D + A M G P+ T+ ++ LCK +DEA +L + MI
Sbjct: 1137 YTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMI 1196
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ P TL +C + N + + +E + + + L+ C K++
Sbjct: 1197 DRGLSPPEVTRVTLAYEYC---KRNDSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVG 1253
Query: 303 GALSLYGEMLSKGIKPDVV 321
A + ++L K D V
Sbjct: 1254 VAALFFQKLLEKDSSADRV 1272
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 111/215 (51%), Gaps = 1/215 (0%)
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
++R F NEA ++++M +QG+ P+ +T N +++ + G ++ A + D M G
Sbjct: 754 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 813
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
V P++ Y ++ G G++ A M G + ++++ C+N + A+
Sbjct: 814 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 873
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
+ +M+ G KP+++ + +L L + +++AF++ +EM R+G + +T+ IDGL
Sbjct: 874 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 933
Query: 366 CKNSYIVEAVELF-RTLRILKCELDIRAYNCLIDG 399
CK + +A LF + +R + ++ Y +I G
Sbjct: 934 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGG 968
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 15/181 (8%)
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
V D L NG + +A ++ M++ F GR+N A + + M++
Sbjct: 733 VTADSLLANGNLQKAHEVMRCMLR---------------NFSEIGRLNEAVGMVMDMQNQ 777
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G T + + + ++ + IE A +++ EM +G+ PD Y + + F +++ A
Sbjct: 778 GLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEA 837
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ M + G D T + LC+N + A+ FR + L + ++ + LIDG
Sbjct: 838 DRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDG 897
Query: 400 L 400
L
Sbjct: 898 L 898
>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 811
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 130/473 (27%), Positives = 211/473 (44%), Gaps = 88/473 (18%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF-- 72
P V +F L K D LFK + G+ PDL Y+ LI+ + K G + G
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 73 ---------------------------------VVLGRILRSCFTPNAVTFTSLIKGLCA 99
VV R+L +PN VT+T LIKGLC
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE----- 154
+ RI EA ++ ++ G EP++ TY++LI+G + G+ L+E+M
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 155 FGV-------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
+GV +G + A ++M ++I +VV + S+I G+C N ++EA + M
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG 523
Query: 208 DQGVQPNVVTFNVIM------DELCKNGK------------------------------- 230
G++P+V TF +M D CK+ K
Sbjct: 524 IYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLF 583
Query: 231 ----MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
+++AS+ + +I+ + P+ YNT++ G+C R++ A+ +F ++
Sbjct: 584 KCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTV 643
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+ +ILI+ CKN +++GA+ ++ M KG KP+ V Y L + +E +FKLF+EM
Sbjct: 644 TLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 703
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
Q G++ +Y IDGLCK + EA +F K D+ AY LI G
Sbjct: 704 QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRG 756
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 176/369 (47%), Gaps = 18/369 (4%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P + +++ L K + + +L++ + G PD+ Y +L++ K G + H
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI- 129
++L N V F SLI G C +R EA +F + ++G +P+V T+ T++
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 130 -----NGLYRTGHTIVALNLFEEMASG--NGEFGVEGFV----------DKAKELFLQMK 172
+ + + L LF+ M + + V V + A + F +
Sbjct: 540 VSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 599
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 232
+ + PD+VTY ++I G+C +EA+ + + PN VT +++ LCKN MD
Sbjct: 600 EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD 659
Query: 233 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
A R+ +M + G +PNA Y LMD F + + + +LF M+ G + ++ SYSI+I
Sbjct: 660 GAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIII 719
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
+G CK ++ A +++ + + + PDVV Y L ++ ++ A L++ M R+GV
Sbjct: 720 DGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 779
Query: 353 ADTWTYRTF 361
D R
Sbjct: 780 PDDLLQRAL 788
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 179/418 (42%), Gaps = 53/418 (12%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V F+ K+ T ++KR+ G+ P++ TY ILI C+ GR+ F + G
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+IL+ P+ VT++SLI G C + AL+ + G P+V Y L++GL + G
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 137 HTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYT 184
+ A+ +M + V F D+A ++F M I PDV T+T
Sbjct: 476 LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT 535
Query: 185 SVIR------GFCYANDWNEA---------------------------KCLLIE------ 205
+V+R FC KC IE
Sbjct: 536 TVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFF 595
Query: 206 --MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
+++ ++P++VT+N ++ C ++DEA R+ +L+ PN L+ C
Sbjct: 596 NNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKN 655
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
++ A +F M G +Y L++ + K+ +IEG+ L+ EM KGI P +V Y
Sbjct: 656 NDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSY 715
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+ + L + +V+ A +F + + D Y I G CK +VEA L+ +
Sbjct: 716 SIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 773
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 175/384 (45%), Gaps = 27/384 (7%)
Query: 16 PVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYN--ILINCFCKMGRVSHGFV 73
P S + L + D + F +L G+ P + + +L FCK G V+
Sbjct: 180 PQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCK-GEVTKALD 238
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
++ F V+ ++KGL + +I A+ L + + G PNV T+ TLING
Sbjct: 239 FHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFC 297
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ G +D+A +LF M+ I PD++ Y+++I G+ A
Sbjct: 298 KRGE-----------------------MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKA 334
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
L + + +GV+ +VV F+ +D K+G + AS + M+ G+ PN Y
Sbjct: 335 GMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTY 394
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
L+ G C GR+ A ++ + G ++ +YS LI+G+CK + +LY +M+
Sbjct: 395 TILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK 454
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
G PDVVIY L L + + A + +M + + + + IDG C+ + E
Sbjct: 455 MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDE 514
Query: 374 AVELFRTLRILKCELDIRAYNCLI 397
A+++FR + I + D+ + ++
Sbjct: 515 ALKVFRLMGIYGIKPDVATFTTVM 538
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 162/354 (45%), Gaps = 12/354 (3%)
Query: 58 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 117
L+ C C+ G V + + + ++ L R+ A F KL G
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGG 211
Query: 118 CEPN-VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV-------EGF----VDKAK 165
EP+ V + +++ L+ G AL+ + G+ +G ++ A
Sbjct: 212 IEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVAS 271
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
L + D P+VVT+ ++I GFC + + A L M +G++P+++ ++ ++D
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGY 331
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
K G + +L + GV+ + V+++ +D + +G + A ++ M G + V
Sbjct: 332 FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNV 391
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
+Y+ILI G C++ I A +YG++L +G++P +V Y++L + + F L+++
Sbjct: 392 VTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYED 451
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
M + G D Y +DGL K ++ A+ + L++ +N LIDG
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 160/364 (43%), Gaps = 66/364 (18%)
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG--- 153
L ES A F + G +P+ +T + + L R G VA +F+EM + G
Sbjct: 77 LSLESEPNSALKYFRWAEISGKDPSFYT---IAHVLIRNGMFDVADKVFDEMITNRGKDF 133
Query: 154 ----------------EFGVE-----GFVDKAKELFL---------------QMKDENIN 177
+F +E G VDKA E+F+ +M + I
Sbjct: 134 NVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIG 193
Query: 178 PDVVT-----YTSVIRG-----------------FCYANDWNEAKCLLIEMMDQGVQPNV 215
D V + + RG FC + +A +M++G + +
Sbjct: 194 SDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFC-KGEVTKALDFHRLVMERGFRVGI 252
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
V+ N ++ L + +++ ASRLL L++ G PN + TL++GFC G ++RA +LF
Sbjct: 253 VSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
ME G + +YS LI+GY K + L+ + L KG+K DVV++++ V +
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
+ A ++ M G++ + TY I GLC++ I EA ++ + E I Y+
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431
Query: 396 LIDG 399
LIDG
Sbjct: 432 LIDG 435
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 119/255 (46%), Gaps = 26/255 (10%)
Query: 3 IFDYMLNMRPSPP-PVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
+FD M + S VC N++ L K + F L + PD+ TYN +I
Sbjct: 559 LFDLMQRNKISADIAVC--NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 616
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
+C + R+ + + + F PN VT T LI LC + + A +F+ + G +PN
Sbjct: 617 YCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPN 676
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
TY L ++ F + G F +LF +M+++ I+P +V
Sbjct: 677 AVTYGCL-------------MDWFSKSVDIEGSF----------KLFEEMQEKGISPSIV 713
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+Y+ +I G C +EA + + +D + P+VV + +++ CK G++ EA+ L + M
Sbjct: 714 SYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 773
Query: 242 IQIGVRPNAFVYNTL 256
++ GV+P+ + L
Sbjct: 774 LRNGVKPDDLLQRAL 788
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 188/390 (48%), Gaps = 31/390 (7%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FN L + + +FK + G+ P + T+N L++ K GR S + +L
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227
Query: 80 RS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ TP+ TF LI+G C S + E F ++ F C+P+V TYNTL++GL R G
Sbjct: 228 DTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKV 287
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+A N+ V+G V K+ N++P+VVTYT++IRG+C D E
Sbjct: 288 KIAHNV------------VKGMVKKS---------PNLSPNVVTYTTLIRGYCMKQDMAE 326
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI-QIGVRPNAFVYNTLM 257
A LL EM+ +G++PN +T+N ++ LC+ K+D+ +L+ M+ G P+ NTL+
Sbjct: 327 ALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLI 386
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK--- 314
C G++ A +F M + +YS+L+ C+ + A + E+ K
Sbjct: 387 KAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEIL 446
Query: 315 ----GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
G KP V YN +F L + ++A ++F ++ + G D +Y+T I G C+
Sbjct: 447 LHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGT-QDPPSYKTLILGHCREGT 505
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+L + D Y +IDGL
Sbjct: 506 PEAGFDLLVLMLRRDFVPDAETYGLMIDGL 535
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 191/425 (44%), Gaps = 29/425 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD ML+ P +FNIL N D FK ++ PD+ TYN L++
Sbjct: 222 LFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGL 281
Query: 63 CKMGRVSHGF-VVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C+ G+V VV G + +S +PN VT+T+LI+G C + + EA +L ++ G +P
Sbjct: 282 CRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKP 341
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE--------------GFVDKAKE 166
N TYNTLI GL + E M G+G F + G +++A
Sbjct: 342 NKITYNTLIQGLCEAQKLDKIKEILEGMV-GDGGFIPDTCTLNTLIKAHCTMGKLEEAFS 400
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM-------DQGVQPNVVTFN 219
+F +M + + PD TY+ ++R C D+ A+ E+ D G +P V +N
Sbjct: 401 VFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYN 460
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
+ + LC NGK +A R+ +++ G + + Y TL+ G C G +L V M
Sbjct: 461 PMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHCREGTPEAGFDLLVLMLRR 519
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE---IHQV 336
+Y ++I+G K + A +ML P I++++ L E H+
Sbjct: 520 DFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHES 579
Query: 337 ERAFKLFDEMQ-RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
KL E + R + T T + LC++ ++EA ++ + +DI +
Sbjct: 580 ASLVKLMLERRIRQNIDLSTHTMEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCST 639
Query: 396 LIDGL 400
+I GL
Sbjct: 640 VISGL 644
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 143/340 (42%), Gaps = 25/340 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLF-PDLYTYNILINCFCKMGRVSHGFV 73
P ++N L L + + D + + + + G F PD T N LI C MG++ F
Sbjct: 341 PNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFS 400
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-------RVFGCEPNVFTYN 126
V ++ P++ T++ L++ LC A F +L GC+P V YN
Sbjct: 401 VFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYN 460
Query: 127 TLINGLYRTGHTIVALNLFEE-MASGNGEFGV----------EGFVDKAKELFLQMKDEN 175
+ L G T A +F + M G + EG + +L + M +
Sbjct: 461 PMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRD 520
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
PD TY +I G D A L +M+ P F+ I+ L + G E++
Sbjct: 521 FVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESA 580
Query: 236 RLLDLMIQIGVRPN----AFVYNTLMDGFCLTGRVNRAKELFV-SMESMGCTHTVFSYSI 290
L+ LM++ +R N L+ C + ++ A+++ + S+E + S
Sbjct: 581 SLVKLMLERRIRQNIDLSTHTMEELVSFLCQSRKLLEAQKMLLFSLEKRQSVD-IDMCST 639
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
+I+G CK ++ A +LY E++ KG++ + L + L
Sbjct: 640 VISGLCKAHKVSEAFALYYELVEKGMQHRLTCQEDLRISL 679
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 101/236 (42%), Gaps = 17/236 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N +F L N +F++L G D +Y LI C+ G GF +
Sbjct: 454 PLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGT-QDPPSYKTLILGHCREGTPEAGFDL 512
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +LR F P+A T+ +I GL + + A K+ P +++++ L
Sbjct: 513 LVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVE 572
Query: 135 TG--HTIVALN--LFEEMASGNGEFGVEGFVD------------KAKELFLQMKDENINP 178
G H +L + E N + + +A+++ L ++ +
Sbjct: 573 KGCAHESASLVKLMLERRIRQNIDLSTHTMEELVSFLCQSRKLLEAQKMLLFSLEKRQSV 632
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
D+ ++VI G C A+ +EA L E++++G+Q + + L G+++EA
Sbjct: 633 DIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQHRLTCQEDLRISLEAEGRLNEA 688
>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Brachypodium distachyon]
Length = 673
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 196/422 (46%), Gaps = 63/422 (14%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P S+N + A+ + VLSL++R+ + + P +T++I C++GR
Sbjct: 134 PSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADEALT 193
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L + R P+ V + ++I LCA+ + EAA L ++ + GC +V T+N +++GL
Sbjct: 194 MLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLC 253
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
G A L + M + G V P+ +TY +++G C A
Sbjct: 254 TLGRLREAARLVDRMM-------IRGCV----------------PNAITYGFLLKGLCLA 290
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+ EA+ M+ + + NVV FN ++ +GK+ EA+ L + M G P+A Y
Sbjct: 291 SQVEEAR----TMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTY 346
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN--------------- 298
+ L+ G C GR+ A +L ME G ++ +Y+IL++ +C+N
Sbjct: 347 SILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSD 406
Query: 299 --------------------KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
+ ++ A+ EM S+G KPD+ YNT+ L +Q+E
Sbjct: 407 KGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEE 466
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A LF+ + +GV A+ TY T I L +N +A+ L + + C LDI +YN LI
Sbjct: 467 AEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIK 526
Query: 399 GL 400
L
Sbjct: 527 AL 528
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 128/475 (26%), Positives = 194/475 (40%), Gaps = 78/475 (16%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
++ M++ PP +F+I L + D L++ + + G PD Y +I+
Sbjct: 156 LSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIH 215
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C G V+ +L + + + TF ++ GLC R+ EAA L ++ + GC P
Sbjct: 216 ALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVP 275
Query: 121 NVFTYNTLINGL--------YRT-----------------------GHTIVALNLFEEMA 149
N TY L+ GL RT G A L+E M
Sbjct: 276 NAITYGFLLKGLCLASQVEEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMG 335
Query: 150 SGNGEFGVE------------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
S G + A +L +M+D+ P +VTYT ++ FC W+
Sbjct: 336 SKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWD 395
Query: 198 EAKCLL-----------------------------------IEMMDQGVQPNVVTFNVIM 222
+ +L EM QG +P++ T+N I+
Sbjct: 396 NIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTII 455
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
LC N +M+EA L + ++ GV NA YNTL+ G A L M GC+
Sbjct: 456 YHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCS 515
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
+ SY+ LI C++ ++ ++ L EM KGIKP+ V YN L L + +V A +L
Sbjct: 516 LDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALEL 575
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
EM + D TY T I+GLCK ++ A+ L L DI YN LI
Sbjct: 576 SKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILI 630
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 168/366 (45%), Gaps = 14/366 (3%)
Query: 17 VCSFNILFG-CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVL 75
V FN + G CL K + L++ + S G PD +TY+ILI+ CK+GR+ +L
Sbjct: 308 VVLFNTVIGRCLLDGKLKEAA-ELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLL 366
Query: 76 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRT 135
+ F P+ VT+T L+ C A+ + G N+ YN +I + +
Sbjct: 367 REMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKD 426
Query: 136 GHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTY 183
A+ +EM S + + + +++A+ LF + E + + +TY
Sbjct: 427 RRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITY 486
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
++I W +A L +M+ G ++V++N ++ LC++G +D + LL M +
Sbjct: 487 NTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAE 546
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G++PN YN L+ C T RV A EL M + T + +Y+ LING CK +
Sbjct: 547 KGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHA 606
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
AL+L ++ ++ + D++ YN L + + A L + G+ + T+ +
Sbjct: 607 ALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQ 666
Query: 364 GLCKNS 369
+ S
Sbjct: 667 NFVRKS 672
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S+N+L L K + L L K + + L PD+ TYN LIN CKMG + +
Sbjct: 551 PNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNL 610
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ + +T+ LI C + +A+ L + G PN T+ ++ R
Sbjct: 611 LEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFVR 670
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N L L K L+L ++L++ + D+ TYNILI+ CK + ++
Sbjct: 586 PDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASML 645
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAES 101
L R + S TPN T+ +++ +S
Sbjct: 646 LNRAVTSGITPNERTWGIMVQNFVRKS 672
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 172/349 (49%), Gaps = 23/349 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++ +L + + LF+ + G+ D+Y Y +I+C C+ G V V+
Sbjct: 295 VVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFD 354
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ P+A T+ +LI G+C ++ A L +++ G + N +NTLI+G
Sbjct: 355 EMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDG----- 409
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+ G VD+A L + M+ + + DV Y S+ G C N
Sbjct: 410 ------------------YCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRK 451
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+EAK LL M+++GV PN ++F ++D CK G EA R+ M + G PN YN L
Sbjct: 452 DEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVL 511
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG+ G + A +L +E+ G V++ + LI+G C + +++ AL L+ EM +G+
Sbjct: 512 IDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGL 571
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
P+VV Y + L + + E AFKL+DEM+ G+ D Y + + L
Sbjct: 572 VPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 182/387 (47%), Gaps = 12/387 (3%)
Query: 26 CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTP 85
L + D+ L F+R+ + + +Y+ I+++ CK G V G ++ +
Sbjct: 199 ALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKA 258
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
N VT+ + I+G + A + T + G NV TY LI+G G A LF
Sbjct: 259 NVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLF 318
Query: 146 EEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
EEM E V G V +A LF +M D+ + P TY ++I G C A
Sbjct: 319 EEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKA 378
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
A+ L+ EM +G+ N V FN ++D C++G +DEA RL +M + G+ + F Y
Sbjct: 379 GQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAY 438
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N++ G C R + AK L SM G + S++ LI+ YCK A ++ EM
Sbjct: 439 NSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEE 498
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG P+++ YN L + ++ A KL DE++ G+ D +T + I G C + +
Sbjct: 499 KGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDM 558
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A++LF + ++ Y +I GL
Sbjct: 559 ALKLFDEMPQRGLVPNVVTYTAMISGL 585
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 180/393 (45%), Gaps = 14/393 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F++LF A NK + L F+ + G D + + + + G+V R++
Sbjct: 158 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 217
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRT---G 136
+ T ++ GLC + L ++ G + NV TYN I G ++ G
Sbjct: 218 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 277
Query: 137 HTIVALNLFEEMASG----------NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
L L E+ +G F G +++A+ LF +M+++ I DV YTS+
Sbjct: 278 GVAEILTLMEKEGVACNVVTYTLLIHG-FSNIGKIEEAQRLFEEMREKGIEADVYVYTSI 336
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I C + + A L EM D+G+ P+ T+ ++ +CK G+M+ A L++ M G+
Sbjct: 337 ISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGI 396
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
N ++NTL+DG+C +G V+ A L V ME G VF+Y+ + +G CK + A
Sbjct: 397 DLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKG 456
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L M+ +G+ P+ + + TL + + A ++F EM+ G + TY IDG
Sbjct: 457 LLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYS 516
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
K + EA +L L D+ LI G
Sbjct: 517 KRGNMKEAHKLKDELENRGLIPDVYTCTSLIHG 549
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P SF L K ++ +F+ + G P++ TYN+LI+ + K G +
Sbjct: 464 RGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKE 523
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ + P+ T TSLI G C + ++ A LF ++ G PNV TY +I+
Sbjct: 524 AHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMIS 583
Query: 131 GLYRTGHTIVALNLFEEM 148
GL + G + A L++EM
Sbjct: 584 GLSKDGRSEEAFKLYDEM 601
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 60/119 (50%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N+L +K + L L + GL PD+YT LI+ C G+V +
Sbjct: 503 PNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKL 562
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ + PN VT+T++I GL + R EA L+ +++ G P+ Y++L+ L+
Sbjct: 563 FDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLH 621
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 88/234 (37%), Gaps = 59/234 (25%)
Query: 223 DELCKNGKMDEASRLLD-LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK----------- 270
D+L K+ K E L + + G+R V +L+D C + NRAK
Sbjct: 104 DKLHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASLVDDACNESKCNRAKFKEKFFDLLFR 163
Query: 271 ------------ELFVSMESMG-----------------------CTH------------ 283
E F ME G C
Sbjct: 164 VYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEV 223
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
TV+S +I+++G CK ++E L E+ +KG+K +VV YN F+ + ++
Sbjct: 224 TVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEIL 283
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
M+++GVA + TY I G I EA LF +R E D+ Y +I
Sbjct: 284 TLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSII 337
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 174/365 (47%), Gaps = 12/365 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
C +N L + ++ D V L K + + G+ P + TY IL++ + G +S V
Sbjct: 183 ACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYD 242
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ R + ++++I C + A+ +F + G EPN TY LING + G
Sbjct: 243 EMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIG 302
Query: 137 HTIVALNLFEEMA-SGNGEFGV-----------EGFVDKAKELFLQMKDENINPDVVTYT 184
A L +M G G + G V+KA E+ M+ I D+ TY
Sbjct: 303 QIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYN 362
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
++ G C N +AK LL M ++GV PN V++ ++ K G M EA RL M
Sbjct: 363 TLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGK 422
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G RP+ YN ++DG+ G + A+ ME G +++Y+ L++G+C N +++ A
Sbjct: 423 GSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVA 482
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L L+ EM +G KP+VV Y L L + + E AF+L+D+M G+ D Y +
Sbjct: 483 LRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGS 542
Query: 365 LCKNS 369
L +S
Sbjct: 543 LHTDS 547
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 170/359 (47%), Gaps = 12/359 (3%)
Query: 54 TYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL 113
+ +++++ FCK G V +L + R NA + SL+ + A L ++
Sbjct: 150 SASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEM 209
Query: 114 RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFV 161
G EP V TY L++GL R G +++EM N V G V
Sbjct: 210 ENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNV 269
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
+A E+F + + P+ TY ++I GFC A+ LL +M +GV N + FN +
Sbjct: 270 RRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTM 329
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
+D C++G +++A + +M ++G+ + + YNTL G C R+ AK+L M G
Sbjct: 330 IDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGV 389
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
SY+ LI+ + K ++ A L+ +M KG +P VV YN + + + A +
Sbjct: 390 APNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAER 449
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
EM++ G+ D +TY + G C N + A+ LF ++ + ++ AY L+ GL
Sbjct: 450 FKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGL 508
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 156/337 (46%), Gaps = 28/337 (8%)
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTS---LIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
G++ +LG+ + SC P +VT S ++ G C + +A L +L G N
Sbjct: 126 GQLPAAADLLGKAIASC--PASVTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNA 183
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
YN+L++ R + D L +M++ + P V T
Sbjct: 184 CCYNSLLDSYTRQRND-----------------------DAVAGLLKEMENRGVEPTVGT 220
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT ++ G A D ++ + + EM + V +V ++ +++ C+ G + AS + D +
Sbjct: 221 YTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECV 280
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
GV PN Y L++GFC G++ A+ L M+ G H ++ +I+GYC++ +E
Sbjct: 281 GHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVE 340
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL + M GI+ D+ YNTL L ++++E A KL M GVA + +Y T I
Sbjct: 341 KALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLI 400
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
K +VEA LFR + + YN +IDG
Sbjct: 401 SIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDG 437
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 102/230 (44%), Gaps = 14/230 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FN + ++ + L + + G+ D+YTYN L C++ R+ +L +
Sbjct: 326 FNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMA 385
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
PN V++T+LI E ++EA LF + G P+V TYN +I+G + G
Sbjct: 386 EKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIR 445
Query: 140 VALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
A +EM +G V G VD A LF +MK P+VV YT++
Sbjct: 446 EAERFKKEMEKKGLVPDIYTYAGLVHGHC-VNGKVDVALRLFEEMKHRGTKPNVVAYTAL 504
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
+ G EA L +M+ G+ P+ ++V++ L + + D R
Sbjct: 505 VSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSLHTDSRKDPLPR 554
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 55/121 (45%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
S P V ++N++ KN K + GL PD+YTY L++ C G+V
Sbjct: 424 SRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVAL 483
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+ + PN V +T+L+ GL E R EA L+ + G P+ Y+ L+ L
Sbjct: 484 RLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSL 543
Query: 133 Y 133
+
Sbjct: 544 H 544
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 192/402 (47%), Gaps = 23/402 (5%)
Query: 15 PPVCSFNILFGCLAKNKHY--DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
P + + N + L+++ L +F+ L L P+ YT+N+L++ C G ++
Sbjct: 169 PSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADAL 228
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
L + +P+AVT+ +L+ C + + EA AL +++ G P TYNTL++
Sbjct: 229 ATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAF 288
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGF---------VDKAKELFLQMKDE-----NINP 178
R G A + E M + E + + K E F ++KDE P
Sbjct: 289 ARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAF-RLKDEMERLSTALP 347
Query: 179 DVVTYTSVIRGFCYANDW---NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
DVVTY +++ C+ W ++A LL EM D+GV+P +VT N+++ LCK GK++EA
Sbjct: 348 DVVTYNTLVDA-CF--KWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEAL 404
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
L+ + + G+ P+ YNTL+D +C G V +A L M G F+ + ++
Sbjct: 405 GKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNL 464
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
CK K E A L +G PD V Y T+ F+ + E A +L+D+M +
Sbjct: 465 CKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSI 524
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
TY T I GLC+ + EA++ L D YN +I
Sbjct: 525 STYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIII 566
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 175/395 (44%), Gaps = 13/395 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+FN+L L+ + GL PD TYN L+N C+ G + +L R+
Sbjct: 210 TFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARM 269
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
R P T+ +L+ I +A + + +G EP++ TYN L GL + G
Sbjct: 270 KRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKV 329
Query: 139 IVALNLFEEMASGNGEFG----VEGFVDK---------AKELFLQMKDENINPDVVTYTS 185
A L +EM + VD A L +M+D+ + P +VT+
Sbjct: 330 DEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNI 389
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
V++ C EA L ++ ++G+ P+V+T+N ++D CK G + +A L+D M+ G
Sbjct: 390 VVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKG 449
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
++ + F NT++ C R A+EL S G SY ++ Y K E AL
Sbjct: 450 LKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPAL 509
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
L+ +M+ + + P + YNTL L + +++ A +E+ G+ D TY I
Sbjct: 510 RLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAY 569
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
CK + A + + D+ N L++GL
Sbjct: 570 CKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGL 604
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 193/434 (44%), Gaps = 48/434 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L + +L R+ G+ P TYN L++ F ++G + V
Sbjct: 241 PDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKV 300
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPNVFTYNTLINGLY 133
+ + F P+ T+ L GLC ++ EA L ++ R+ P+V TYNTL++ +
Sbjct: 301 VESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACF 360
Query: 134 RTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVV 181
+ + AL L EEM + + EG +++A ++ +E + PDV+
Sbjct: 361 KWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVI 420
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS------ 235
TY ++I +C A + +A L+ EM+ +G++ + T N ++ LCK + ++A
Sbjct: 421 TYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSP 480
Query: 236 -----------------------------RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
RL D MI+ + P+ YNTL+ G C R+
Sbjct: 481 PQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERL 540
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
A + + G +Y+I+I+ YCK ++E A + +M+ KPDVV NTL
Sbjct: 541 KEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTL 600
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
L ++++A KLF+ G D TY T I +CK + A+ F + +
Sbjct: 601 MNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGL 660
Query: 387 ELDIRAYNCLIDGL 400
+ D YN ++ L
Sbjct: 661 QPDAFTYNVVLSAL 674
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 174/362 (48%), Gaps = 12/362 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F + D M + + P V ++N L K + L L + + G+ P L T+NI++
Sbjct: 333 FRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVK 392
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK G++ L +I P+ +T+ +LI C + +A L ++ G +
Sbjct: 393 SLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKM 452
Query: 121 NVFTYNTLINGLYRTGHTIVALNLF----------EEMASGN--GEFGVEGFVDKAKELF 168
+ FT NT++ L + A L +E++ G + E + A L+
Sbjct: 453 DTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLW 512
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
QM + + P + TY ++I+G C EA L E++++G+ P+ T+N+I+ CK
Sbjct: 513 DQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKE 572
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G ++ A R + M++ +P+ NTLM+G CL G++++A +LF S G V +Y
Sbjct: 573 GDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITY 632
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ LI CK +++ AL + +M KG++PD YN + L E + E A + ++
Sbjct: 633 NTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLAD 692
Query: 349 DG 350
G
Sbjct: 693 SG 694
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 167/403 (41%), Gaps = 52/403 (12%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + NI+ L K + L +++ GL PD+ TYN LI+ +CK G V+ F +
Sbjct: 382 PTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTL 441
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEA-----------------------AALFT 111
+ ++ + T +++ LC R +A AA F
Sbjct: 442 MDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFK 501
Query: 112 K------LRVFGCE------PNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------- 152
+ LR++ P++ TYNTLI GL R A++ E+
Sbjct: 502 EYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETT 561
Query: 153 -----GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
+ EG ++ A +M + + PDVVT +++ G C ++A L +
Sbjct: 562 YNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWV 621
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
++G + +V+T+N ++ +CK G +D A D M G++P+AF YN ++ GR
Sbjct: 622 EKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSE 681
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKN---KEIEGALSLYGEMLSKGIKPDVVIYN 324
A + + G F+ +L KE EG E K + Y
Sbjct: 682 EAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPE--AESSEKAQDNALETYM 739
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
L Q++ A + DEM + G+ D+ TY T ++GL K
Sbjct: 740 ERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIK 782
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 113/279 (40%), Gaps = 55/279 (19%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
++D M+ R P + ++N L L + + + L GL PD TYNI+I+ +
Sbjct: 511 LWDQMIE-RKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAY 569
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK---------- 112
CK G + + F +++ + F P+ VT +L+ GLC ++ +A LF
Sbjct: 570 CKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDV 629
Query: 113 -------------------------LRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
+ V G +P+ FTYN +++ L G + A N+ +
Sbjct: 630 ITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHK 689
Query: 148 MA----------------SGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
+A S E V+ K + + +N + TY + G C
Sbjct: 690 LADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNA---LETYMERLNGLC 746
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
EAK +L EMM +G+ + T+ +M+ L K K
Sbjct: 747 TGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQK 785
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 2/169 (1%)
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV--NRAKELFVSMESMGCTHTVFSYSIL 291
A L L + GVRP+ N ++ + + ++F S+ + +++++L
Sbjct: 155 AQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLL 214
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
++ +C + AL+ M G+ PD V YNTL + A L M+RDG+
Sbjct: 215 VHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGI 274
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
A TY T + + +I +A ++ ++ E D+R YN L GL
Sbjct: 275 APTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGL 323
>gi|147801213|emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
Length = 1024
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 191/389 (49%), Gaps = 32/389 (8%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
N +F K+ +++ +FK + G+ P + T+N L++ K GR S + +L
Sbjct: 241 NFVFSIEKKSGGAESI-KVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLD 299
Query: 81 S-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+ TP+ TF LI+G C S + E F ++ F C+P+V TYNTL++GL R G
Sbjct: 300 TYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVK 359
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
+A N+ V+G V K+ N++P+VVTYT++IRG+C D EA
Sbjct: 360 IAHNV------------VKGMVKKS---------PNLSPNVVTYTTLIRGYCMKQDMAEA 398
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI-QIGVRPNAFVYNTLMD 258
LL EM+ +G++PN +T+N ++ LC+ K+D+ +L+ M+ G P+ NTL+
Sbjct: 399 LSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIK 458
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK---- 314
C G++ A +F M + +YS+L+ C+ + A + E+ K
Sbjct: 459 AHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILL 518
Query: 315 ---GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
G KP V YN +F L + ++A ++F ++ + G D +Y+T I G C+
Sbjct: 519 HDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGT-QDPPSYKTLILGHCREGTP 577
Query: 372 VEAVELFRTLRILKCELDIRAYNCLIDGL 400
+L + D Y +IDGL
Sbjct: 578 EAGFDLLVLMLRRDFVPDAETYGLMIDGL 606
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 176/404 (43%), Gaps = 37/404 (9%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD ML+ P +FNIL N D FK ++ PD+ TYN L++
Sbjct: 293 LFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGL 352
Query: 63 CKMGRVSHGF-VVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C+ G+V VV G + +S +PN VT+T+LI+G C + + EA +L ++ G +P
Sbjct: 353 CRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKP 412
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQM-KDENINPD 179
N TYNTLI GL +DK KE+ M D PD
Sbjct: 413 NKITYNTLIQGLCEAQK-----------------------LDKIKEILEGMVGDGGFIPD 449
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
T ++I+ C EA + +M + VQP+ T++V++ LC+ G A D
Sbjct: 450 TCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFD 509
Query: 240 -------LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
L+ +G +P YN + + C G+ +A+ +F + G T SY LI
Sbjct: 510 ELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRG-TQDPPSYKTLI 568
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
G+C+ E L ML + PD Y + L + A K ++M +
Sbjct: 569 LGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHL 628
Query: 353 ADTWTYRTFIDGLC-KNSYIVEAVEL-FRTLRIL-KCELDIRAY 393
T + + + L K I + ++L T+R+L K L +A+
Sbjct: 629 PTTAIFHSILAALVEKERRIRQNIDLSTHTVRLLYKSGLQDKAF 672
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 145/354 (40%), Gaps = 39/354 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLF-PDLYTYNILINCFCKMGRVSHGFV 73
P ++N L L + + D + + + + G F PD T N LI C MG++ F
Sbjct: 412 PNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFS 471
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-------RVFGCEPNVFTYN 126
V ++ P++ T++ L++ LC A F +L GC+P V YN
Sbjct: 472 VFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYN 531
Query: 127 TLINGLYRTGHTIVALNLFEE-MASGNGEFGV----------EGFVDKAKELFLQMKDEN 175
+ L G T A +F + M G + EG + +L + M +
Sbjct: 532 PMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRD 591
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK----- 230
PD TY +I G D A L +M+ P F+ I+ L + +
Sbjct: 592 FVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKERRIRQN 651
Query: 231 MDEASRLLDLMIQIGVRPNAFV-------------YNTLMDGFCLTGRVNRAKELFV-SM 276
+D ++ + L+ + G++ AF+ L+ C + ++ A+++ + S+
Sbjct: 652 IDLSTHTVRLLYKSGLQDKAFMTIGLLYENGYLVKMEELVSFLCQSRKLLEAQKMLLFSL 711
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
E + S +I+G CK ++ A +LY E++ KG++ + L + L
Sbjct: 712 EKRQSV-DIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQHRLTCQEDLRISL 764
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 123/302 (40%), Gaps = 48/302 (15%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N +F L N +F++L G D +Y LI C+ G GF +
Sbjct: 525 PLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGT-QDPPSYKTLILGHCREGTPEAGFDL 583
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +LR F P+A T+ +I GL + + A K+ P +++++ L
Sbjct: 584 LVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVE 643
Query: 135 -----------TGHTIVAL---NLFEEMASGNGEFGVEGFVDKAKEL------------- 167
+ HT+ L L ++ G G++ K +EL
Sbjct: 644 KERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYENGYLVKMEELVSFLCQSRKLLEA 703
Query: 168 -----FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
F K ++++ D+ + +VI G C A+ +EA L E++++G+Q + +
Sbjct: 704 QKMLLFSLEKRQSVDIDMCS--TVISGLCKAHKVSEAFALYYELVEKGMQHRLTCQEDLR 761
Query: 223 DELCKNGKMDEASRLLDLMIQI-------------GVRPNAFVYNTLMDGFCLTGRVNRA 269
L G+++EA + M ++ VR F++++ M F R+ +
Sbjct: 762 ISLEAEGRLNEAKFVSKKMPEVPKQWQSDRTGPKLSVRRKEFLWSSKMKSFNPFHRIEAS 821
Query: 270 KE 271
++
Sbjct: 822 RD 823
>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 738
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 176/345 (51%), Gaps = 18/345 (5%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F+ + CL + V+ +F+ +GLF D YNIL + CK+G+V +L +
Sbjct: 368 FSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELK 427
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+ +T+LI G + + +EA +LF ++ G +P+V YN L G +R
Sbjct: 428 SMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDF 487
Query: 140 VALNLFEEMASGNGEFG-------VEGF-----VDKAKELFLQMKDENINPDVVTYTSVI 187
A++L M S E +EG V++A+E F +K E++ V YT+++
Sbjct: 488 EAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALV 547
Query: 188 RGFCYA------NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
G+C A ++ EA LL M++ ++P+ V ++ I LC NG M+ A L +L
Sbjct: 548 NGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLF 607
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
I G P+A Y +++G+C T + A ELF M+ G T +Y+I+INGYCK +
Sbjct: 608 IHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCL 667
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
A L+ +M +GIKPDV+ Y + L E AF+L++EM
Sbjct: 668 REAHELFKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEM 712
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 188/399 (47%), Gaps = 28/399 (7%)
Query: 5 DYMLNMRPSP---PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
D++L R + P + SFN L L K+ D L LF R S GL + YTY I+I
Sbjct: 175 DFLLQTRKNVVILPNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKA 234
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK G + V + + ++ + + I+GLC +R A+ R +
Sbjct: 235 LCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVH 294
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
+ Y +I G F E +D+A+ +FL+M+ + + PDV
Sbjct: 295 KYAYTAVIRG-----------------------FCNETKLDEAESVFLEMEKQGLVPDVY 331
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y +++ G+C + ++++A + M+ +G++ N V F+ I+ L + G+ E + +
Sbjct: 332 VYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEF 391
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY-CKNKE 300
+ G+ + YN L D C G+V+ A + ++SM + Y+ LINGY + K
Sbjct: 392 KESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKP 451
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
IE A SL+ EM +G KPDVV YN L F A L + M+ GV ++ T++
Sbjct: 452 IE-AQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKI 510
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I+GLC + EA E F L+ E+ + Y L++G
Sbjct: 511 IIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNG 549
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 176/386 (45%), Gaps = 20/386 (5%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
D S+F + GL PD+Y Y L++ +C V ++ N V F+ +
Sbjct: 312 DEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCI 371
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG-- 151
+ L R +E +F + + G + YN L + L + G A+ + +E+ S
Sbjct: 372 LHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQL 431
Query: 152 -----------NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
NG F ++G +A+ LF +M++ PDVV Y + GF EA
Sbjct: 432 DVDMKHYTTLINGYF-LQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAM 490
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
LL M QGV+PN T +I++ LC GK++EA + + V + +Y L++G+
Sbjct: 491 DLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGY 550
Query: 261 CLTGRVNRAKEL------FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
C + ++ EL +M M + YS + C N +EGA +L+ +
Sbjct: 551 CEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHT 610
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G PD V Y + + + + A +LF +M+ G+ D TY I+G CK + + EA
Sbjct: 611 GFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREA 670
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
ELF+ ++ + D+ AY +I GL
Sbjct: 671 HELFKDMKERGIKPDVIAYTVIIKGL 696
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 158/354 (44%), Gaps = 37/354 (10%)
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI--- 139
F+ N T+TS+I+ LC + + +LF + + F N L + L+ + +
Sbjct: 91 FSHNIQTYTSIIRILCYYNLDRKLDSLFLDIIDHSKQDPCFEINVLFDSLFEGVNDVNED 150
Query: 140 --------------VALNLFEE-----------------MASGN---GEFGVEGFVDKAK 165
V+ N+F E + S N VD A
Sbjct: 151 HYLFNAFNGFVKACVSQNMFVEAIDFLLQTRKNVVILPNILSFNFLINRLVKHDEVDMAL 210
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
LF++ K + + TYT VI+ C DW + EM + GV + + ++ L
Sbjct: 211 CLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGL 270
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
CKN + D +L + + Y ++ GFC +++ A+ +F+ ME G V
Sbjct: 271 CKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDV 330
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
+ Y L++GYC ++ + AL++Y M+S+GIK + VI++ + L E+ + +F+E
Sbjct: 331 YVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEE 390
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ G+ D Y D LCK + +AV + L+ ++ ++D++ Y LI+G
Sbjct: 391 FKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLING 444
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 106/262 (40%), Gaps = 26/262 (9%)
Query: 164 AKELFLQMKDEN-INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
A F Q+K+++ + ++ TYTS+IR CY N + L ++++D Q NV+
Sbjct: 78 AYSYFTQLKNQHGFSHNIQTYTSIIRILCYYNLDRKLDSLFLDIIDHSKQDPCFEINVLF 137
Query: 223 DEL-------------------------CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
D L +N ++ LL + + PN +N L+
Sbjct: 138 DSLFEGVNDVNEDHYLFNAFNGFVKACVSQNMFVEAIDFLLQTRKNVVILPNILSFNFLI 197
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
+ V+ A LFV +S G ++Y+I+I CK + E + ++ EM G+
Sbjct: 198 NRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRVFDEMKEAGVD 257
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
D Y T L + ++ + + + + + + Y I G C + + EA +
Sbjct: 258 DDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNETKLDEAESV 317
Query: 378 FRTLRILKCELDIRAYNCLIDG 399
F + D+ Y L+ G
Sbjct: 318 FLEMEKQGLVPDVYVYCALVHG 339
>gi|18420848|ref|NP_568460.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154065|sp|Q8L6Y3.1|PP396_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g24830
gi|22655280|gb|AAM98230.1| putative protein [Arabidopsis thaliana]
gi|30725398|gb|AAP37721.1| At5g24830 [Arabidopsis thaliana]
gi|332005984|gb|AED93367.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 593
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 193/385 (50%), Gaps = 20/385 (5%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
D L L K++ +G+ P L T+N L+N CK G + ++ + +PN V++ +L
Sbjct: 138 DAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTL 197
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALN---LFEEM-- 148
IKGLC+ + + +A LF + +G PN T N +++ L + G ++ N L EE+
Sbjct: 198 IKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKG--VIGNNNKKLLEEILD 255
Query: 149 -ASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
+ N + G V +A E++ +M +N+ D V Y +IRG C + +
Sbjct: 256 SSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGN 315
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
A + +M+ +GV P+V T+N ++ LCK GK DEA L M GV P+ Y
Sbjct: 316 MVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKV 375
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
++ G C+ G VNRA E +SM V ++++I+GY + + ALS+ MLS G
Sbjct: 376 IIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYG 435
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+KP+V N L + ++ A+ + +EM+ + DT TY + C ++ A
Sbjct: 436 VKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAF 495
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
+L+ + C+ DI Y L+ GL
Sbjct: 496 QLYDEMLRRGCQPDIITYTELVRGL 520
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 169/397 (42%), Gaps = 65/397 (16%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M M PSP V S+N L L + D L LF +N G+ P+ T NI+++ C+ G
Sbjct: 182 MREMGPSPNCV-SYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKG 240
Query: 67 RVSHG-------------------FVVLGRILRSCFT--------------------PNA 87
+ + V+ ++ SCF ++
Sbjct: 241 VIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADS 300
Query: 88 VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
V + +I+GLC+ ++ A + G P+VFTYNTLI+ L + G A +L
Sbjct: 301 VVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGT 360
Query: 148 MASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M +G + G V++A E L M ++ P+V+ + VI G+ D
Sbjct: 361 MQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGD 420
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
+ A +L M+ GV+PNV T N ++ K G++ +A + + M + P+ YN
Sbjct: 421 TSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNL 480
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L+ C G + A +L+ M GC + +Y+ L+ G C ++ A SL + + G
Sbjct: 481 LLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATG 540
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
I D V F++L K + +QR G A
Sbjct: 541 ITIDHVP----FLIL---------AKKYTRLQRPGEA 564
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 120/267 (44%), Gaps = 23/267 (8%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G+ PD++TYN LI+ CK G+ + G + P+ +++ +I+GLC + A
Sbjct: 330 GVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRA 389
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKE 166
+ P V +N +I+G R G T AL++ M S +GV+
Sbjct: 390 NEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLS----YGVK-------- 437
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
P+V T ++I G+ +A + EM + P+ T+N+++ C
Sbjct: 438 -----------PNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAAC 486
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
G + A +L D M++ G +P+ Y L+ G C GR+ +A+ L +++ G T
Sbjct: 487 TLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHV 546
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLS 313
+ IL Y + + A +Y + L+
Sbjct: 547 PFLILAKKYTRLQRPGEAYLVYKKWLA 573
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 117/248 (47%), Gaps = 4/248 (1%)
Query: 157 VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
++G +D A L +M + P ++T+ ++ G C A +A L+ EM + G PN V
Sbjct: 133 LQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCV 192
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV-NRAKELF-- 273
++N ++ LC +D+A L + M + G+RPN N ++ C G + N K+L
Sbjct: 193 SYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEE 252
Query: 274 -VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
+ + +IL++ KN + AL ++ EM K + D V+YN + L
Sbjct: 253 ILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCS 312
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
+ A+ +M + GV D +TY T I LCK EA +L T++ D +
Sbjct: 313 SGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQIS 372
Query: 393 YNCLIDGL 400
Y +I GL
Sbjct: 373 YKVIIQGL 380
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 87/219 (39%), Gaps = 39/219 (17%)
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
IM +LC GK+D A L MI GV P +N L++G C G + +A L M MG
Sbjct: 127 IMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMG 186
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP---------------------- 318
+ SY+ LI G C ++ AL L+ M GI+P
Sbjct: 187 PSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNN 246
Query: 319 -----------------DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
D+VI L F+ V +A +++ EM + V AD+ Y
Sbjct: 247 KKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVI 306
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I GLC + +V A + D+ YN LI L
Sbjct: 307 IRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISAL 345
>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 180/366 (49%), Gaps = 18/366 (4%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
P+ + YNI+IN C GR S ++ P VTF ++I C E ++EA L
Sbjct: 89 PNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKL 148
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM---------------ASGNGE 154
F L+ G PN YNTL+NG + A L+EEM SG+ +
Sbjct: 149 FDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYK 208
Query: 155 FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
+G E + L + + PD + + G C+A +EA L++M+++G+ P+
Sbjct: 209 YGRE---EDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPS 265
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
++ FN ++ + G D+A LM+ G+ P+ ++L+ G + GR+ A EL
Sbjct: 266 IIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIG 325
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
M G + ++++L++ + K ++ GA SL+GEM +GI PDVV ++ L +
Sbjct: 326 QMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQG 385
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
VE A+ +F EM R G+ + + Y + I G CK + EA++L + +R DI N
Sbjct: 386 LVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTN 445
Query: 395 CLIDGL 400
+I GL
Sbjct: 446 MIIGGL 451
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 182/395 (46%), Gaps = 21/395 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD + M SP + +N L K + D L++ + G+ PD T+NIL++
Sbjct: 148 LFDGLKEMGFSPNAIM-YNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGH 206
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K GR G +L I P+ F + GLC R+ EA + G P++
Sbjct: 207 YKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSI 266
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG----------------VEGFVDKAKE 166
+N++I + G A ++ M FG + G + +A E
Sbjct: 267 IAFNSVIAAYSQAGLEDKAFEAYKLMV----HFGLTPSPSTCSSLLMGLSINGRLQEATE 322
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
L QM ++ ++ + + +T ++ F D A+ L EM +G+ P+VV F+ +D L
Sbjct: 323 LIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLS 382
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
K G ++EA + M++ G+ PN F YN+L+ GFC G++N A +L M G +F
Sbjct: 383 KQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIF 442
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+ +++I G CK + A++++ +M G+ PD++ YNTL + + A L + M
Sbjct: 443 TTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRM 502
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
G D TY I G C + + AV + L
Sbjct: 503 YASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDEL 537
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 189/435 (43%), Gaps = 53/435 (12%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++NI+ L+ F + G P + T+N +IN FCK G V +
Sbjct: 89 PNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKL 148
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ F+PNA+ + +L+ G I +A L+ ++R G P+ T+N L++G Y+
Sbjct: 149 FDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYK 208
Query: 135 TGH-----------TIVAL----NLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPD 179
G +++ L +LF+ SG G +D+A E + M ++ ++P
Sbjct: 209 YGREEDGDRLLKDISVLGLLPDRSLFDISVSG---LCWAGRLDEAMEFLMDMLEKGLSPS 265
Query: 180 VVTYTSVIRGFCYAN-----------------------------------DWNEAKCLLI 204
++ + SVI + A EA L+
Sbjct: 266 IIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIG 325
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
+M+++G+ N + F V++D+ K G + A L M + G+ P+ ++ +DG G
Sbjct: 326 QMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQG 385
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
V A +F+ M G F+Y+ LI G+CK ++ AL L M +G+ PD+ N
Sbjct: 386 LVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTN 445
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
+ L + ++ A +F +M + G++ D TY T I+G CK +V A L +
Sbjct: 446 MIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYAS 505
Query: 385 KCELDIRAYNCLIDG 399
D+ YN I G
Sbjct: 506 GSNPDLTTYNIRIHG 520
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 182/413 (44%), Gaps = 51/413 (12%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 95
L + R+ G+ P IL ++G + + + ++R P TF+ +I
Sbjct: 5 ALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIIL 64
Query: 96 GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN--- 152
G C + I +L + F CEPN F YN +IN G T AL F M
Sbjct: 65 GFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNP 124
Query: 153 ---------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
F EG V +A++LF +K+ +P+ + Y +++ G+ + ++A L
Sbjct: 125 TVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLY 184
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
EM +G+ P+ +TFN+++ K G+ ++ RLL + +G+ P+ +++ + G C
Sbjct: 185 EEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWA 244
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCK-------------------------- 297
GR++ A E + M G + ++ +++ +I Y +
Sbjct: 245 GRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTC 304
Query: 298 ---------NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
N ++ A L G+M+ KG+ + + + L F+ V A L+ EM+R
Sbjct: 305 SSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMER 364
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL--DIRAYNCLIDG 399
G+ D + FIDGL K + EA +F L +L+ L + AYN LI G
Sbjct: 365 RGIFPDVVAFSAFIDGLSKQGLVEEAYNVF--LEMLRKGLIPNNFAYNSLICG 415
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 170/371 (45%), Gaps = 18/371 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FNIL K + L K ++ GL PD ++I ++ C GR+
Sbjct: 194 PDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEF 253
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCA---ESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
L +L +P+ + F S+I E + EA L FG P+ T ++L+ G
Sbjct: 254 LMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVH---FGLTPSPSTCSSLLMG 310
Query: 132 LYRTGHTIVALNLFEEM-----ASGNGEFGV-------EGFVDKAKELFLQMKDENINPD 179
L G A L +M + N F V G V A+ L+ +M+ I PD
Sbjct: 311 LSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPD 370
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
VV +++ I G EA + +EM+ +G+ PN +N ++ CK GK++EA +L
Sbjct: 371 VVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEK 430
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
+M G+ P+ F N ++ G C GR+ A +F+ M G + + +Y+ LINGYCK
Sbjct: 431 VMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAF 490
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++ A +L M + G PD+ YN ++ RA + DE+ G+ + ++
Sbjct: 491 DMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGILSFSFACP 550
Query: 360 TFIDGLCKNSY 370
++ K+ Y
Sbjct: 551 PTLNAHTKHFY 561
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 115/238 (48%)
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
+A E+ +M++ + P + + D+ L +++ +G QP TF+ I+
Sbjct: 4 QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
C+ G + LL LM + PNAF YN +++ C+ GR + A F M GC
Sbjct: 64 LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 123
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
TV +++ +IN +CK + A L+ + G P+ ++YNTL ++ ++++A L
Sbjct: 124 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 183
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++EM++ G+A D T+ + G K + L + + +L D ++ + GL
Sbjct: 184 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGL 241
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 192/386 (49%), Gaps = 25/386 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FNIL + + + L L ++ G PD TYN ++ CK +++ +
Sbjct: 209 PNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDL 268
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ S PN T+ L+ G C + EAA + + G P+V+TYNT++ GL
Sbjct: 269 LLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCD 328
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
EG +D+A L +M+ + PDVVTY ++I G C+ +
Sbjct: 329 -----------------------EGKIDEAVRLRDKMESFKLVPDVVTYNTLIDG-CFEH 364
Query: 195 DWNEAKCLLIEMMD-QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
++A L+E M +GV+ N VT N+++ C GK+DEAS ++ M++ G P+ F Y
Sbjct: 365 RGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTY 424
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
NT+++G+C G++ A ++ M G F+ + L++ C K+++ A +L +
Sbjct: 425 NTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARK 484
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+G D V Y TL + F+ Q +RA KL++EM+ G+ A TY T I GLC + +
Sbjct: 485 RGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQ 544
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
AV+ L D N +I G
Sbjct: 545 AVDKLNELLEKGLVPDESTSNIIIHG 570
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 185/386 (47%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N + L K V L ++ ++GLFP+ TYNIL++ +CK+ + V
Sbjct: 244 PDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEV 303
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + P+ T+ ++++GLC E +I EA L K+ F P+V TYNTLI+G +
Sbjct: 304 IELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFE 363
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ A L EEM K + + VT+ +I+ FC
Sbjct: 364 HRGSDAAFKLVEEM-----------------------KARGVKENGVTHNIMIKWFCTEG 400
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+EA ++++M++ G P+ T+N +++ CK GKM EA +++D M + G++ + F N
Sbjct: 401 KIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLN 460
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+ CL +++ A L + G +Y LI GY K+++ + AL L+ EM
Sbjct: 461 TLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKET 520
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
GI ++ YNT+ L + ++A +E+ G+ D T I G C + +A
Sbjct: 521 GIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKA 580
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ + + DI N L+ GL
Sbjct: 581 FQFHNKMVEHSLKPDIFTCNILLRGL 606
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 177/376 (47%), Gaps = 14/376 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN-CFCKMGRVSHGFV 73
P V ++N + L D + L ++ S L PD+ TYN LI+ CF G + F
Sbjct: 314 PDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDA-AFK 372
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
++ + N VT +IK C E +I EA+ + K+ G P+ FTYNT+ING
Sbjct: 373 LVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYC 432
Query: 134 RTGHTIVALNLFEEMASGNGEFG------------VEGFVDKAKELFLQMKDENINPDVV 181
+ G A + +EM + +E +D A L ++ + D V
Sbjct: 433 KAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEV 492
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY ++I G+ + A L EM + G+ ++T+N I+ LC +GK D+A L+ +
Sbjct: 493 TYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNEL 552
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++ G+ P+ N ++ G+C G V +A + M +F+ +IL+ G C+ +
Sbjct: 553 LEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGML 612
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E L+L+ +SKG D V YN + + ++E AF L EM+ + D +TY
Sbjct: 613 EKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAI 672
Query: 362 IDGLCKNSYIVEAVEL 377
+ GL K EA +L
Sbjct: 673 VTGLTKAGRTEEAEKL 688
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 197/410 (48%), Gaps = 25/410 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L +++ D L + + + G+ + T+NI+I FC G++ V
Sbjct: 349 PDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNV 408
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ +++ S F+P+ T+ ++I G C ++ EA + ++ G + + FT NTL++ +
Sbjct: 409 MVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCL 468
Query: 135 TGHTIVALNL----------FEEMASGN---GEFGVEGFVDKAKELFLQMKDENINPDVV 181
A L +E+ G G F E D+A +L+ +MK+ I ++
Sbjct: 469 EKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQ-ADRALKLWEEMKETGIVATII 527
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY ++IRG C + ++A L E++++G+ P+ T N+I+ C G +++A + + M
Sbjct: 528 TYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKM 587
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++ ++P+ F N L+ G C G + + LF + S G +Y+I+I+ +CK + +
Sbjct: 588 VEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRL 647
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL---FDEMQRDGVAADT--- 355
E A L EM K ++PD YN + L + + E A KL F E + DT
Sbjct: 648 EDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPE 707
Query: 356 -----WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Y I LC +A++LF+ L+ Y L+DGL
Sbjct: 708 LGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGL 757
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 190/404 (47%), Gaps = 21/404 (5%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P P+ ++ ++K H +F ++ P+L T N L+N + SH V
Sbjct: 137 PKPLLDTSLAAYVISKQPHLGH--QIFNKMKRLRFRPNLLTCNTLLNALVR-SNSSHSLV 193
Query: 74 VLGRILRSCF----TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
+ + PN TF LI G C+++ EA L ++ +GC P+ TYNT++
Sbjct: 194 FSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVL 253
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFG--------VEGF-----VDKAKELFLQMKDENI 176
L + +L +M + +G F V G+ + +A E+ M + +
Sbjct: 254 TALCKRSQLTQVRDLLLQMKN-SGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGM 312
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
PDV TY +++RG C +EA L +M + P+VVT+N ++D ++ D A +
Sbjct: 313 LPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFK 372
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
L++ M GV+ N +N ++ FC G+++ A + V M G + F+Y+ +INGYC
Sbjct: 373 LVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYC 432
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K ++ A + EM KG+K D NTL + Q++ A+ L + ++ G D
Sbjct: 433 KAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEV 492
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY T I G K+ A++L+ ++ I YN +I GL
Sbjct: 493 TYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGL 536
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 171/376 (45%), Gaps = 31/376 (8%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+ NI+ D ++ ++ +G PD +TYN +IN +CK G+++ + ++ +
Sbjct: 388 THNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEM 447
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
R + T +L+ +C E ++ +A L K R G + TY TLI G ++
Sbjct: 448 GRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQA 507
Query: 139 IVALNLFEEMASGNGEFGV----------------EGFVDKAKELFLQMKDENINPDVVT 182
AL L+EEM E G+ G D+A + ++ ++ + PD T
Sbjct: 508 DRALKLWEEMK----ETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDEST 563
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+I G+C+ +A +M++ ++P++ T N+++ LC+ G +++ L + I
Sbjct: 564 SNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWI 623
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G + YN ++ FC R+ A +L ME ++Y+ ++ G K E
Sbjct: 624 SKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTE 683
Query: 303 GALSLYGEMLSKGIK-------PDV----VIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
A L + KG + P++ ++Y+ L + + A KLF + ++ GV
Sbjct: 684 EAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGV 743
Query: 352 AADTWTYRTFIDGLCK 367
+ + +TY +DGL K
Sbjct: 744 SLNKYTYIKLMDGLLK 759
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 134/327 (40%), Gaps = 38/327 (11%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLA----KNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
Y L M+ + +G L K++ D L L++ + TG+ + TYN +I
Sbjct: 476 YTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRG 535
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
C G+ L +L P+ T +I G C E + +A K+ +P+
Sbjct: 536 LCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPD 595
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
+FT N L+ GL R G L LF ++ K K + D V
Sbjct: 596 IFTCNILLRGLCREGMLEKGLTLFNT------------WISKGKPM-----------DTV 632
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY +I FC +A L+ EM + ++P+ T+N I+ L K G+ +EA +L
Sbjct: 633 TYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKF 692
Query: 242 IQIGVR-----------PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ G + + +Y+ + C G+ A +LF E G + ++Y
Sbjct: 693 AEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIK 752
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIK 317
L++G K ++ SL M+S I+
Sbjct: 753 LMDGLLKRRKSFTTTSLLPFMVSATIQ 779
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 63/156 (40%), Gaps = 11/156 (7%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
+ P ++NI+ K + + L + L PD YTYN ++ K GR
Sbjct: 625 KGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEE 684
Query: 71 G------FVVLGRILRSCFTP-----NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 119
F G+ +++ T + + ++ I LC + + +A LF + G
Sbjct: 685 AEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVS 744
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEF 155
N +TY L++GL + + +L M S +F
Sbjct: 745 LNKYTYIKLMDGLLKRRKSFTTTSLLPFMVSATIQF 780
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 206/465 (44%), Gaps = 83/465 (17%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N++ G L K K LF + + P+ TYN LI+ +CK+G++ F +
Sbjct: 215 PGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNI 274
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R+ P +TF SL+ GLC + EA + ++ V+G P+ FTY TL +G +
Sbjct: 275 RERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLK 334
Query: 135 TGHTIVALNLFEEMA--------------------SGNGEFGVE---------------- 158
G+ ++ L EE GN E E
Sbjct: 335 CGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVF 394
Query: 159 -----------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
G ++KA +M+ + P+ VTY S+++ FC + EA+ + +M+
Sbjct: 395 FNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMV 454
Query: 208 DQGVQPNVVTFNVIMDE-----------------------------------LCKNGKMD 232
++GV PNV T+N ++D LCK+ +
Sbjct: 455 EKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANIL 514
Query: 233 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
EA +L M+ GV PNA +YN L+DG C+ G++ A F M + T+ +Y+ILI
Sbjct: 515 EAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILI 574
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
NG CK ++ A +L E+ KG+ DV+ YN+L V++A +L++ M++ G+
Sbjct: 575 NGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIK 634
Query: 353 ADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
TY I G C +V ++++ + + D YN LI
Sbjct: 635 PTLNTYHRLIAG-CGKEGLVLVEKIYQEMLQMNLVPDRVIYNALI 678
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 177/386 (45%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S N+ L K Y+ L LF + +GL PD + Y I K+G + +
Sbjct: 145 PSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIEL 204
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + R +P + +I GLC E R+ +A LF ++ PN TYNTLI+G +
Sbjct: 205 MTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCK 264
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G A N+ E +MK EN+ P ++T+ S++ G C A
Sbjct: 265 VGQLEEAFNIRE-----------------------RMKVENVEPTIITFNSLLNGLCRAQ 301
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EA+ +L EM G P+ T+ + D K G +D + L + ++ GV+ + +
Sbjct: 302 MMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCS 361
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L++ C G + +A+E+ G ++ ++NGYC+ +I A + +M +
Sbjct: 362 ILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAV 421
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G++P+ V YN+L E+ +E A K +M GV + TY T IDG ++
Sbjct: 422 GLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRC 481
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
++ + + ++ +Y CLI+ L
Sbjct: 482 FQILEEMEKKGLKPNVISYGCLINCL 507
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 177/413 (42%), Gaps = 57/413 (13%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
+IL L K + + + K+ GL P +N ++N +C++G ++ + + ++
Sbjct: 361 SILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEA 420
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
PN VT+ SL+K C + EA K+ G PNV TYNTLI+G
Sbjct: 421 VGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDG--------- 471
Query: 141 ALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
+G D+ ++ +M+ + + P+V++Y +I C + EA+
Sbjct: 472 --------------YGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAE 517
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
+L +M+ +GV PN +N+++D C GK+ +A R D M+ + P YN L++G
Sbjct: 518 VILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGL 577
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP-- 318
C G+V A+ L + G + V +Y+ LI+GY ++ AL LY M GIKP
Sbjct: 578 CKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTL 637
Query: 319 --------------------------------DVVIYNTLFVVLFEIHQVERAFKLFDEM 346
D VIYN L E V++A L M
Sbjct: 638 NTYHRLIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAM 697
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ G+ D TY I G K + + L ++I Y+ LI G
Sbjct: 698 EAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVG 750
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 158/348 (45%), Gaps = 13/348 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L ++ +D + + + GL P++ +Y LINC CK + V+
Sbjct: 460 PNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVI 519
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
LG ++ PNA + LI G C ++ +A F ++ P + TYN LINGL +
Sbjct: 520 LGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCK 579
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G + A NL E+ F V G V KA EL+ MK I P + T
Sbjct: 580 KGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNT 639
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I G C + + EM+ + P+ V +N ++ ++G + +A L M
Sbjct: 640 YHRLIAG-CGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAME 698
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G++P+ YN L+ G GR+++ K L M+ G +Y ILI G+CK K+ +
Sbjct: 699 AQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFD 758
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
GA Y EM G P V I + L L E + A + EM G
Sbjct: 759 GAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEMNMKG 806
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 135/297 (45%), Gaps = 24/297 (8%)
Query: 84 TPNAVTFTSLIKGLCAESRIM-EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
TP F+ ++ +C+ES+++ E+A L+ ++ G P+V + N + L T L
Sbjct: 108 TPMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTL 167
Query: 143 NLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
LF E+ + + PD Y I+ D A L
Sbjct: 168 QLFSEIV-----------------------ESGLRPDQFMYGKAIQAAVKLGDLKRAIEL 204
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
+ M GV P V +NV++ LCK +M +A +L D M+ V PN YNTL+DG+C
Sbjct: 205 MTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCK 264
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G++ A + M+ T+ +++ L+NG C+ + +E A + EM G PD
Sbjct: 265 VGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFT 324
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
Y TLF + V+ + L +E R GV +T ++ LCK + +A E+ +
Sbjct: 325 YTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLK 381
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 1/189 (0%)
Query: 213 PNVVTFNVIMDELCKNGKM-DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
P F+ ++ +C KM E++ L LM + GV P+ N ++ T R +
Sbjct: 109 PMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQ 168
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
LF + G F Y I K +++ A+ L M G+ P V +YN + L
Sbjct: 169 LFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLC 228
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIR 391
+ +++ A KLFDEM VA + TY T IDG CK + EA + +++ E I
Sbjct: 229 KEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTII 288
Query: 392 AYNCLIDGL 400
+N L++GL
Sbjct: 289 TFNSLLNGL 297
>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 613
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 182/377 (48%), Gaps = 14/377 (3%)
Query: 5 DYMLNM--RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
D ML M + P V ++N L K ++ V + + + + + TY +LI +
Sbjct: 236 DLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWY 295
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
G+++ V ++L + FTS+I C + A ALF +L G N
Sbjct: 296 GSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANA 355
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
TY LI+G +G A L EM S + + +G +D+A +
Sbjct: 356 HTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDV 415
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M+ + D+ TY ++ G C N EAK L M+++GV PN V+F +++D CK G
Sbjct: 416 MEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGN 475
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ EA R+ M + G +PN YNTL+DG+ G++ A L MES+G T +++Y+
Sbjct: 476 LVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTT 535
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L++G C ++E AL+L E+ KG+ +V Y + L + + E AF+L+DEM G
Sbjct: 536 LVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAG 595
Query: 351 VAADTWTYRTFIDGLCK 367
+ D Y + + L K
Sbjct: 596 LTPDDRVYTSLVANLHK 612
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 200/417 (47%), Gaps = 23/417 (5%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSL--FKRLNSTGLFPDLYTYNIL 58
F +FDYM++ + + + + LA + V+SL FK++ + +Y+ I+
Sbjct: 165 FKVFDYMVH---NGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVEFKVDVTVYSMTIV 221
Query: 59 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC 118
I+ CK GRV ++ + PN VT+ +L+ A +IM+ + LR+
Sbjct: 222 IDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVN---AYIKIMDFEGVNEMLRLMEM 278
Query: 119 EP---NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE------------GFVDK 163
+ N TY LI +G A +FE+M E + G + +
Sbjct: 279 DKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKR 338
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
A LF ++ + + + TY ++I G C + + A+ L+ EM QG+ N+V FN +++
Sbjct: 339 AFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLIN 398
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
CK G +DEA R+ D+M + G + F YNT+ G C R AK +M G
Sbjct: 399 GYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDP 458
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
S++I+I+ +CK + A ++ +M KG KP+VV YNTL + +++ A++L
Sbjct: 459 NAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLK 518
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
DEM+ G+ +D +TY T + G C + EA+ L + + I Y +I GL
Sbjct: 519 DEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGL 575
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 185/396 (46%), Gaps = 12/396 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V S I+ L K + L + G+ P++ TYN L+N + K+ +L
Sbjct: 215 VYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLR 274
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ NA T+T LI+ + +I EA +F K+ G E ++ + ++I+ + G
Sbjct: 275 LMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLG 334
Query: 137 HTIVALNLFEEM-----ASGNGEFGV-------EGFVDKAKELFLQMKDENINPDVVTYT 184
+ A LF+E+ + +G G +D A+ L +M+ + ++ ++V +
Sbjct: 335 NMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFN 394
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
++I G+C +EA + M +G + ++ T+N I LCK + +EA R L M++
Sbjct: 395 TLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEK 454
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
GV PNA + ++D C G + A+ +F M+ G V +Y+ LI+GY K +++ A
Sbjct: 455 GVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEA 514
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L EM S G+ D+ Y TL +VE A L +E+ R G+A TY I G
Sbjct: 515 YRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISG 574
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
L K EA L+ + D R Y L+ L
Sbjct: 575 LSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVANL 610
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ + P V ++N L +K L + S G+ D+YTY L++ C G+
Sbjct: 486 MKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGK 545
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V +L + R + VT+T++I GL E R EA L+ ++ G P+ Y +
Sbjct: 546 VEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTS 605
Query: 128 LINGLYRT 135
L+ L++T
Sbjct: 606 LVANLHKT 613
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 175/385 (45%), Gaps = 23/385 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + L L + + L + +R+ G P Y +++ C+ + +
Sbjct: 74 PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEM 133
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P VT T++I C E R+ +A + +++ GC+PNV+TYN L+ G
Sbjct: 134 LQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQG--- 190
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
F EG V KA L +M+ +NPD VTY +IRG C
Sbjct: 191 --------------------FCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDG 230
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
A LL M G+ + T+N +++ LCK+G+ D+A L D + G++PNA +N
Sbjct: 231 HIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFN 290
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L++G C +G+ + A + M S GCT ++YS I CK K + LS GEML K
Sbjct: 291 SLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQK 350
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
+KP V Y + L + + + EM G D TY T + C + EA
Sbjct: 351 DVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEA 410
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+ + +D AYN L+DG
Sbjct: 411 ENVLMEMSKNGVTVDTMAYNTLMDG 435
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 173/334 (51%), Gaps = 16/334 (4%)
Query: 46 TGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME 105
+G PD YT+N LI +C+ +V + ++ F + V++ +LI+GLC RI E
Sbjct: 4 SGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDE 63
Query: 106 AAALFTKLRVFGCEPNVFTYNTLINGL---YRTGHTIVALNLFEEMASGNGEFGVEGFVD 162
A LF ++ +P++ Y L+ GL R ++ L +E+ VD
Sbjct: 64 AVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVD 119
Query: 163 ---------KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
+A+E+ +M ++ + P VVT T+VI +C ++A +L M +G +P
Sbjct: 120 FRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKP 179
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
NV T+N ++ C GK+ +A LL+ M GV P+A YN L+ G C+ G + A L
Sbjct: 180 NVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLL 239
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
ME G ++Y+ LIN CK+ + A SL+ + ++GIKP+ V +N+L L +
Sbjct: 240 RLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKS 299
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
+ + A+K ++M G DT+TY +FI+ LCK
Sbjct: 300 GKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCK 333
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 174/408 (42%), Gaps = 40/408 (9%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++ +R P V ++N L ++L ++ + G+ PD TYN+LI C G
Sbjct: 171 LMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDG 230
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ F +L + + T+ +LI LC + R +A +LF L G +PN T+N
Sbjct: 231 HIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFN 290
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
+LINGL ++G +A E+M S PD TY+S
Sbjct: 291 SLINGLCKSGKADIAWKFLEKMVSAG-----------------------CTPDTYTYSSF 327
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I C E + EM+ + V+P+ V + +++ +L K +R M+ G
Sbjct: 328 IEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGC 387
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+ Y T M +C+ GR+N A+ + + M G T +Y+ L++G+ + + A+S
Sbjct: 388 NPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVS 447
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE-----------------RAFKLFDEMQRD 349
+ +M S P+ Y L L + VE F LFD M+++
Sbjct: 448 ILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKN 507
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
++ TY + ++G ++ EA L ++ L+ Y L+
Sbjct: 508 EFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALV 555
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 176/450 (39%), Gaps = 64/450 (14%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N+L + H ++ L + + GL D YTYN LIN CK GR +
Sbjct: 214 PDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSL 273
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ PNAVTF SLI GLC + A K+ GC P+ +TY++ I L +
Sbjct: 274 FDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCK 333
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKEL------------FLQMKDENINPDVVT 182
+ L+ EM + + + +L + +M NPDVVT
Sbjct: 334 MKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVT 393
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+ +R +C NEA+ +L+EM GV + + +N +MD G+ D A +L M
Sbjct: 394 YTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMT 453
Query: 243 QIGVRPNAFVY------------------------------------------------- 253
+ PN F Y
Sbjct: 454 SVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNS 513
Query: 254 ---NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
+++++GF GR A L M+ + Y+ L+ +CK+K A L
Sbjct: 514 GTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCS 573
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M+ G P ++ Y L L Q ++A ++F + + D ++ IDGL K +
Sbjct: 574 MIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGH 633
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ E+ L + C + Y L + L
Sbjct: 634 SDISREMIIMLERMNCRPSHQTYAMLTEEL 663
>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
Length = 619
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 127/420 (30%), Positives = 196/420 (46%), Gaps = 38/420 (9%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + N + LA+++ V LF++L + P+++T+NI+I+ CK G ++
Sbjct: 154 PPNTRTCNHILLRLARDRSGRLVRRLFEQLPA----PNVFTFNIVIDFLCKEGELAEARS 209
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ R+ P+ VTF SLI G + E L ++R GC+ +V TYN LIN
Sbjct: 210 LFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFC 269
Query: 134 RTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
+ G A F M F EG V +A +LF QM+ + +
Sbjct: 270 KFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEF 329
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT +I G C A ++A LL EM+ QGV NVVT+ V++D LCK K+ EA +L +M
Sbjct: 330 TYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMM 389
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ GVR N +Y TL+ G + +A L M++ G + Y LI G C ++
Sbjct: 390 EKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKL 449
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF--------------------- 340
+ A SL +M G++P+ +IY T+ F+ +V A
Sbjct: 450 DEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEA 509
Query: 341 -KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+LF+EM G++ D Y +DG K + +A L + +LD+ Y C I G
Sbjct: 510 VQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISG 569
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 166/391 (42%), Gaps = 69/391 (17%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FN L K D V L + + +G D+ TYN LINCFCK GR+ +
Sbjct: 221 PDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGY 280
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R N VTF++ + C E + EA LF ++RV G N FTY LI+G +
Sbjct: 281 FAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCK 340
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFV--------------------------------- 161
G A+ L +EM V +
Sbjct: 341 AGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELL 400
Query: 162 --------------DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
+KA L +MK++ + D+ Y ++I+G C + +EAK LL +M
Sbjct: 401 YTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMD 460
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN------------------ 249
+ G++PN + + +MD K+GK+ EA +L ++ G +PN
Sbjct: 461 ESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKG 520
Query: 250 ----AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
VY L+DG+ G ++ A L M G +F Y+ I+G+C + A
Sbjct: 521 MSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAR 580
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
++ EM+ GI PD +YN L + EI ++
Sbjct: 581 EVFSEMIGHGIAPDRAVYNCLITQIPEIREL 611
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 157/322 (48%), Gaps = 8/322 (2%)
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
A +L+ L + +A ++R PN T N ++ L R + LFE
Sbjct: 122 ASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFE 181
Query: 147 EMASGNG-EFGV-------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
++ + N F + EG + +A+ LF +MK+ PDVVT+ S+I G+ + +E
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
+ L+ EM G + +VVT+N +++ CK G+M+ A M + GV N ++T +D
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
FC G V A +LF M G F+Y+ LI+G CK ++ A+ L EM+ +G+
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
+VV Y L L + +V A + M++ GV A+ Y T I G N +A+ L
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
++ ELDI Y LI GL
Sbjct: 422 SEMKNKGLELDISLYGALIQGL 443
>gi|326514834|dbj|BAJ99778.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 609
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 178/362 (49%), Gaps = 12/362 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +N L L + D + + + G+ P++ TY I C+ V F +
Sbjct: 236 VVGYNTLVAGLCRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYE 295
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++R P+ VT ++L+ GLC R EA ALF ++ G PN TY TLI+ L++
Sbjct: 296 EMVRMGVLPDVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKAR 355
Query: 137 HTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
+ L E+ S G +G +D+ K++F +N P+ VTYT
Sbjct: 356 RGSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYT 415
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+I C A + + A+ +L+EM D+ V PNVVTF+ I++ L K G + +A+ + M +
Sbjct: 416 VLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKER 475
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G+ PN Y T+MDGF A +L+ M G F +L+NG KN ++E A
Sbjct: 476 GIDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEA 535
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
+L+ +M +G+ D V Y TL LF++ + AFK+ E+ ++ D Y F++
Sbjct: 536 EALFRDMNKRGMLLDHVNYTTLIDGLFKMGNMPAAFKVGQELTERNLSPDAVVYNVFVNC 595
Query: 365 LC 366
LC
Sbjct: 596 LC 597
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 177/384 (46%), Gaps = 23/384 (5%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +N L K+ + L+ +R+ + G+ D+ YN L+ C+ G +L
Sbjct: 201 VVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARGMLE 260
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ PN VT+T+ I C + + +A +L+ ++ G P+V T + L++GL R G
Sbjct: 261 TMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVVTLSALVDGLCRAG 320
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
F E A LF +M+ P+ VTY ++I A
Sbjct: 321 R-------FSE----------------AYALFREMEKIGAAPNHVTYCTLIDSLWKARRG 357
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+E+ LL E++ +GV ++V + +MD L K GK+DE + + PN Y L
Sbjct: 358 SESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVL 417
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+D C G V+ A+++ + ME V ++S +ING K + A +M +GI
Sbjct: 418 IDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGI 477
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
P+VV Y T+ F+ + E A L+ EM +GV + + ++GL KN + EA
Sbjct: 478 DPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEA 537
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
LFR + LD Y LIDGL
Sbjct: 538 LFRDMNKRGMLLDHVNYTTLIDGL 561
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 137/324 (42%), Gaps = 22/324 (6%)
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIME-AAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+LR+ + + V++ +I GL + R A AL ++ G + T NT + L R G
Sbjct: 119 LLRASESADTVSYNVVISGLTEQGRHGGLAPALLAEMCKRGVPFDAVTVNTALVALCRDG 178
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
A L E M G E DVV + +++ G+C + D
Sbjct: 179 QVEGAAALAEMMVRGR---------------------EIHRLDVVGWNALLDGYCKSGDM 217
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
A M QGV +VV +N ++ LC+ G+ D A +L+ M GV PN Y T
Sbjct: 218 EAALTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARGMLETMKGDGVEPNVVTYTTF 277
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ C T V+ A L+ M MG V + S L++G C+ A +L+ EM G
Sbjct: 278 IAECCRTNAVDDAFSLYEEMVRMGVLPDVVTLSALVDGLCRAGRFSEAYALFREMEKIGA 337
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
P+ V Y TL L++ + + L E+ GV D Y + +D L K I E +
Sbjct: 338 APNHVTYCTLIDSLWKARRGSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKD 397
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
+F + Y LID L
Sbjct: 398 MFHCALSDNHTPNGVTYTVLIDAL 421
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 110/231 (47%), Gaps = 12/231 (5%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+ L L K D V +F S P+ TY +LI+ C+ G V +L +
Sbjct: 379 YTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEME 438
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
PN VTF+S+I GL + + +AA K++ G +PNV TY T+++G ++
Sbjct: 439 DKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQE 498
Query: 140 VALNLFEEMASGNGE---FGVE---------GFVDKAKELFLQMKDENINPDVVTYTSVI 187
AL+L+ EM E F V+ G +++A+ LF M + D V YT++I
Sbjct: 499 SALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHVNYTTLI 558
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
G + A + E+ ++ + P+ V +NV ++ LC GK EA +L
Sbjct: 559 DGLFKMGNMPAAFKVGQELTERNLSPDAVVYNVFVNCLCMLGKSKEAESIL 609
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 114/385 (29%), Positives = 175/385 (45%), Gaps = 23/385 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + L L K + L + +R+ G P Y +++ C + +
Sbjct: 110 PDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEM 169
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P VT T++I C E R+ +A + +++ GC+PNV+TYN L+ G
Sbjct: 170 LQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQG--- 226
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
F EG V KA L +M+ +NPD VTY +IRG C
Sbjct: 227 --------------------FCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDG 266
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
A LL M G+ + T+N +++ LCK+G+ D+A L D + G++PNA +N
Sbjct: 267 HIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFN 326
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L++G C +G+V+ A + M S GCT ++YS I CK K + LS GEML K
Sbjct: 327 SLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQK 386
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
+KP V Y + L + + + EM G D TY T + C + EA
Sbjct: 387 DVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEA 446
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+ + +D AYN L+DG
Sbjct: 447 ENVLMEMSKNGVTVDTMAYNTLMDG 471
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 176/363 (48%), Gaps = 24/363 (6%)
Query: 54 TYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL 113
TYN +I C+ ++ L ++RS + P+A TF SLI G C +++ A LF K+
Sbjct: 13 TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72
Query: 114 RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM----------------ASGNGEFGV 157
+ G +V +Y LI G TG A+ LF EM +G GE
Sbjct: 73 PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQPDMHMYAALVKGLCKAGRGE--- 129
Query: 158 EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
EG + + +MK+ P Y +V+ C+ EA+ +L EM ++G+ P VVT
Sbjct: 130 EGLL-----MLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVT 184
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
+++ CK G+M +A R+L+LM G +PN + YN L+ GFC G+V++A L M
Sbjct: 185 CTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMR 244
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
G +Y++LI G C + IE A L M G+ D YN L L + + +
Sbjct: 245 VCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTD 304
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+A LFD ++ G+ + T+ + I+GLCK+ + A + + C D Y+ I
Sbjct: 305 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFI 364
Query: 398 DGL 400
+ L
Sbjct: 365 EHL 367
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 183/361 (50%), Gaps = 16/361 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N + L + + L + +G PD YT+N LI +C+ +V + ++
Sbjct: 13 TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG-- 136
F + V++ +LI+G C RI EA LF ++ +P++ Y L+ GL + G
Sbjct: 73 PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRG 128
Query: 137 -HTIVALNLFEEMASGNGEFGVEGFVD---------KAKELFLQMKDENINPDVVTYTSV 186
++ L +E+ VD +A+E+ +M ++ + P VVT T+V
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I +C ++A +L M +G +PNV T+N ++ C GK+ +A LL+ M GV
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+A YN L+ G C+ G + A L ME G ++Y+ LIN CK+ + A S
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 308
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L+ + ++GIKP+ V +N+L L + +V+ A+K ++M G DT+TY +FI+ LC
Sbjct: 309 LFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 368
Query: 367 K 367
K
Sbjct: 369 K 369
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 173/408 (42%), Gaps = 40/408 (9%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++ +R P V ++N L ++L ++ G+ PD TYN+LI C G
Sbjct: 207 LMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDG 266
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ F +L + + T+ +LI LC + R +A +LF L G +PN T+N
Sbjct: 267 HIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFN 326
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
+LINGL ++G +A E+M S PD TY+S
Sbjct: 327 SLINGLCKSGKVDIAWKFLEKMVSA-----------------------GCTPDTYTYSSF 363
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I C E + EM+ + V+P+ V + +++ +L K +R M+ G
Sbjct: 364 IEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGC 423
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+ Y T M +C+ GR+N A+ + + M G T +Y+ L++G+ + + A+S
Sbjct: 424 NPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVS 483
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE-----------------RAFKLFDEMQRD 349
+ +M S P+ Y L L + VE F LFD M+++
Sbjct: 484 ILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKN 543
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
++ TY + ++G ++ EA L ++ L+ Y L+
Sbjct: 544 EFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALV 591
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 177/450 (39%), Gaps = 64/450 (14%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N+L + H ++ L + + GL D YTYN LIN CK GR +
Sbjct: 250 PDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSL 309
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ PNAVTF SLI GLC ++ A K+ GC P+ +TY++ I L +
Sbjct: 310 FDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCK 369
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKEL------------FLQMKDENINPDVVT 182
+ L+ EM + + + +L + +M NPDVVT
Sbjct: 370 MKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVT 429
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+ +R +C NEA+ +L+EM GV + + +N +MD G+ D A +L M
Sbjct: 430 YTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMT 489
Query: 243 QIGVRPNAFVY------------------------------------------------- 253
+ PN F Y
Sbjct: 490 SVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNS 549
Query: 254 ---NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
+++++GF GR A L M+ + Y+ L+ +CK+K A L
Sbjct: 550 GTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCS 609
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M+ G P ++ Y L L Q ++A ++F + + D ++ IDGL K +
Sbjct: 610 MIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGH 669
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ E+ L + C + Y L + L
Sbjct: 670 SDISREMIIMLERMNCRPSHQTYAMLTEEL 699
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 181/392 (46%), Gaps = 23/392 (5%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+N R V +N + K+ H + + + G PD+ TYN LI+ C+ G+
Sbjct: 300 MNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGK 359
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
VS +L + L PN ++T LI C + A+ ++ G +P++ TY
Sbjct: 360 VSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGA 419
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
L++GL G VAL + E+M + + PD Y ++
Sbjct: 420 LVHGLVVAGEVDVALTIREKML-----------------------ERGVFPDAGIYNILM 456
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
G C AK LL EM+DQ V P+ + ++D +NG +DEA +L +L I+ G+
Sbjct: 457 SGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMN 516
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P YN ++ G+C G + A M+ F+YS +I+GY K +++GA +
Sbjct: 517 PGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKM 576
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
+ EM+ KP+VV Y +L + R+ K+F EMQ G+ + TY I CK
Sbjct: 577 FREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCK 636
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ +++A F + + KC + +N L++G
Sbjct: 637 EAKLIDAASFFEEMLMNKCVPNDVTFNYLVNG 668
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 178/365 (48%), Gaps = 12/365 (3%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G P++ YN LI+ +CK G + + + F P T+ ++I G C +
Sbjct: 234 GCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAI 293
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV--------- 157
L ++ G NV YNT+I+ Y+ GH + A+ E M + +
Sbjct: 294 DRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISG 353
Query: 158 ---EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
+G V +A +L Q + + P+ +YT +I +C ++ A LIEM ++G +P+
Sbjct: 354 SCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPD 413
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
+VT+ ++ L G++D A + + M++ GV P+A +YN LM G C ++ AK L
Sbjct: 414 LVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLA 473
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
M F Y+ L++G+ +N ++ A L+ + KG+ P +V YN + +
Sbjct: 474 EMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFG 533
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
++ A + M++ +A D +TY T IDG K + A ++FR + +KC+ ++ Y
Sbjct: 534 MMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYT 593
Query: 395 CLIDG 399
LI+G
Sbjct: 594 SLING 598
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 164/357 (45%), Gaps = 31/357 (8%)
Query: 49 FPDLYTYNILINCFCKMGRVSHGFVVLGRILR------SCFTPNAVTFTSLIKGLCAESR 102
FPD+ N L+N K+GR+ + +L C + ++KGLC E +
Sbjct: 162 FPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCI--MVKGLCKEGK 219
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVD 162
+ E L GC PN+ YNTLI+G + G EMA+G
Sbjct: 220 LEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDM--------EMANG----------- 260
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
LF+++K + P V TY ++I GFC D+ LL+EM +G+ NV +N I+
Sbjct: 261 ----LFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTII 316
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
D K+G + +A ++ MI+ G +P+ YNTL+ G C G+V+ A +L G
Sbjct: 317 DARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLM 376
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
FSY+ LI+ YCK + A + EM +G KPD+V Y L L +V+ A +
Sbjct: 377 PNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTI 436
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
++M GV D Y + GLCK + A L + D Y L+DG
Sbjct: 437 REKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDG 493
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 170/368 (46%), Gaps = 33/368 (8%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P + ++ L L D L++ +++ G+FPD YNIL++ CK ++
Sbjct: 408 RGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPA 467
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
++L +L P+A + +L+ G + EA LF G P + YN +I
Sbjct: 468 AKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIK 527
Query: 131 GLYRTG---HTIVALNLFEEMASGNGEFG----VEGFV-----DKAKELFLQMKDENINP 178
G + G + +N ++ EF ++G+V D A+++F +M P
Sbjct: 528 GYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKP 587
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
+VVTYTS+I GFC D + + + EM G+ PNVVT+++++ CK K+ +A+
Sbjct: 588 NVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFF 647
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
+ M+ PN +N L++GF G RA +S + N + +N
Sbjct: 648 EEMLMNKCVPNDVTFNYLVNGFSKNG--TRA----ISEKG--------------NEFQEN 687
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
K+ L+ +G M+S G P YN++ + L + A +L ++M G D+ ++
Sbjct: 688 KQ-SMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSF 746
Query: 359 RTFIDGLC 366
+ G+C
Sbjct: 747 VALLHGVC 754
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 130/319 (40%), Gaps = 26/319 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + L +N + D LF+ G+ P + YN +I +CK G +
Sbjct: 482 PDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMAC 541
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R+ + P+ T++++I G + + A +F ++ C+PNV TY +LING R
Sbjct: 542 INRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCR 601
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G +L +F EM + G F E + A F +M P+ VT
Sbjct: 602 KGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVT 661
Query: 183 YTSVIRGFCY---------ANDWNEAKCLLI-----EMMDQGVQPNVVTFNVIMDELCKN 228
+ ++ GF N++ E K + M+ G P +N I+ LC+
Sbjct: 662 FNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQY 721
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G A +L + M G P++ + L+ G CL GR K + + +Y
Sbjct: 722 GMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVSCNLNERELQIAVNY 781
Query: 289 SILINGYCKNKEIEGALSL 307
S +++ Y E ++ L
Sbjct: 782 SSILDQYLPQGTSEASVIL 800
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 119/262 (45%), Gaps = 19/262 (7%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P +++ + K D +F+ + P++ TY LIN FC+ G
Sbjct: 545 MKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGD 604
Query: 68 VSHGFVVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ H + + R +++C PN VT++ LI C E+++++AA+ F ++ + C PN T+N
Sbjct: 605 L-HRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFN 663
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL----QMKDENINPDVVT 182
L+NG + G ++ E G E F + + +FL +M + P
Sbjct: 664 YLVNGFSKNGTRAIS------------EKGNE-FQENKQSMFLNFFGRMISDGWAPRSAA 710
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S++ C + A L +M +G P+ V+F ++ +C G+ E ++ +
Sbjct: 711 YNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVSCNL 770
Query: 243 QIGVRPNAFVYNTLMDGFCLTG 264
A Y++++D + G
Sbjct: 771 NERELQIAVNYSSILDQYLPQG 792
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 187/397 (47%), Gaps = 12/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N+L L K K + LF + + L P L TYN LI+ +CK G F V
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV 271
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R+ P+ +TF +L+KGL + +A + +++ G P+ FT++ L +G
Sbjct: 272 RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS 331
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
AL ++E + EG ++KA+E+ + + + P+ V
Sbjct: 332 NEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVI 391
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G+C D A+ + M QG++P+ + +N ++ C+ G+M+ A + ++ M
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
GV P+ YN L+ G+ ++ ++ ME G V SY LIN CK ++
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLL 511
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A + +M +G+ P V IYN L ++E AF+ EM + G+ + TY T I
Sbjct: 512 EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLI 571
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
DGL + EA +L + + D+ YN LI G
Sbjct: 572 DGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISG 608
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 192/398 (48%), Gaps = 14/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S +L L K K + +++F + + P + Y I K+ V G +
Sbjct: 142 PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLEL 201
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R+ P+ + LI GLC R+ +A LF ++ P++ TYNTLI+G +
Sbjct: 202 FNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCK 261
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G+ + + E M + + E + G V+ A+ + +MKD PD T
Sbjct: 262 AGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFT 321
Query: 183 YTSVIRGFCYANDWNEAKCLLIE-MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
++ + G+ +N+ EA + E +D GV+ N T +++++ LCK GK+++A +L
Sbjct: 322 FSILFDGYS-SNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGRE 380
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G+ PN +YNT++DG+C G + A+ +ME G +Y+ LI +C+ E+
Sbjct: 381 MAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEM 440
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A +M KG+ P V YN L ++ ++ F + EM+ +G + +Y T
Sbjct: 441 ENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTL 500
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I+ LCK S ++EA + R + +R YN LIDG
Sbjct: 501 INCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG 538
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 197/429 (45%), Gaps = 45/429 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F+ILF + N+ + L +++ +G+ + YT +IL+N CK G++ +
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
LGR + PN V + ++I G C + ++ A + G +P+ YN LI
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCE 436
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G A +M G +G + DK ++ +M+D P+VV+
Sbjct: 437 LGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVS 496
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I C + EA+ + +M D+GV P V +N+++D C GK+++A R M+
Sbjct: 497 YGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEML 556
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ N YNTL+DG +TG+++ A++L + + G VF+Y+ LI+GY ++
Sbjct: 557 KKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQ 616
Query: 303 GALSLYGEMLSKGI-------------------------------KPDVVIYNTLFVVLF 331
++LY EM GI KPD+++YN + +
Sbjct: 617 RCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHC-Y 675
Query: 332 EIH-QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
+H +E+AF L +M + D TY + I G K + E L + + E +
Sbjct: 676 AVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEA 735
Query: 391 RAYNCLIDG 399
YN ++ G
Sbjct: 736 DTYNIIVKG 744
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 170/372 (45%), Gaps = 35/372 (9%)
Query: 59 INCFCKMGRVSHGFVVLGRILRSCFTP--------NAVTFTS----------LIKGLCAE 100
+ + R+ VL +LRS TP +A + +S L+ L E
Sbjct: 62 LRVLLQQNRIETARGVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLNE 121
Query: 101 SR-IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEG 159
S+ I EAA LF LR G P+ + L++ L +T V +N+F + + F
Sbjct: 122 SKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESD--FRPSK 179
Query: 160 F--------------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
F V K ELF +MK + I P V Y +I G C N+A+ L E
Sbjct: 180 FMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDE 239
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M+ + + P+++T+N ++D CK G +++ ++ + M + P+ +NTL+ G G
Sbjct: 240 MLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGM 299
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
V A+ + M+ +G F++SIL +GY N++ E AL +Y + G+K + +
Sbjct: 300 VEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSI 359
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L L + ++E+A ++ G+ + Y T IDG C+ +V A +
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 386 CELDIRAYNCLI 397
+ D AYNCLI
Sbjct: 420 MKPDHLAYNCLI 431
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 160/371 (43%), Gaps = 56/371 (15%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ ++ P V ++NIL G + +D + K + G P++ +Y LINC CK +
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ +V + +P + LI G C++ +I +A ++ G E N+ TYNT
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
LI+GL TG + +A++L L++ + + PDV TY S+I
Sbjct: 570 LIDGLSMTGK-----------------------LSEAEDLLLEISRKGLKPDVFTYNSLI 606
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK-------------------- 227
G+ +A + L EM G++P + T+++++ LC
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFGEMSLKPDL 665
Query: 228 ------------NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
+G M++A L MI+ + + YN+L+ G G++ + L
Sbjct: 666 LVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDE 725
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
M + +Y+I++ G+C+ K+ A Y EM KG DV I N L L E +
Sbjct: 726 MNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWR 785
Query: 336 VERAFKLFDEM 346
+ A + EM
Sbjct: 786 SKEAEIVISEM 796
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 100/203 (49%)
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+EA L + ++G+ P+ + +++D L K + + +++ RP+ F+Y
Sbjct: 126 SEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKA 185
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ V + ELF M+ +VF Y++LI+G CK K + A L+ EML++ +
Sbjct: 186 IQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRL 245
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
P ++ YNTL + E++FK+ + M+ D + T+ T + GL K + +A
Sbjct: 246 LPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAEN 305
Query: 377 LFRTLRILKCELDIRAYNCLIDG 399
+ + ++ L D ++ L DG
Sbjct: 306 VLKEMKDLGFVPDAFTFSILFDG 328
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 65/134 (48%)
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
++ A +LF ++ + G + S ++L++ K K+ ++++ +L +P +Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
++ V + +LF+ M+ D + + Y IDGLCK + +A +LF + +
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 386 CELDIRAYNCLIDG 399
+ YN LIDG
Sbjct: 245 LLPSLITYNTLIDG 258
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (42%)
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ EA+ L + G+ P++ L+D T + +F+++ + F Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
I K ++ L L+ M I P V IYN L L + ++ A +LFDEM
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ TY T IDG CK ++ ++ ++ E + +N L+ GL
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGL 294
>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 605
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 195/399 (48%), Gaps = 18/399 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S+N + L K + L + + GLFP+ T+NIL++ +CK+G + V
Sbjct: 81 PDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEV 140
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + R+ P+ T+T+LI GLC + +I EA L ++ P+V TYN LING +
Sbjct: 141 IDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFE 200
Query: 135 TGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDVV 181
++ L +EM G G + EG +D A +M++ +PD V
Sbjct: 201 CSSSLKGFELIDEM-EGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCV 259
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
T+ ++ G+C A +EA ++ EM +G++ N VT N I+ LC K+D+A +LL
Sbjct: 260 TFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSA 319
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G + Y TL+ G+ G+ E M+ ++ +Y +I G C++ +
Sbjct: 320 SKRGYFVDEVSYGTLIMGYFKVGKSXXWDE----MKEKEIIPSIITYGTMIGGLCRSGKT 375
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ ++ E+L G+ PD YNT+ + QV++AF ++M + D +T
Sbjct: 376 DQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNIL 435
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ GLC + +A++LF+T +D +N +I GL
Sbjct: 436 VRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGL 474
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 172/377 (45%), Gaps = 22/377 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L G L K+ D L + + L P + TYN+LIN + GF +
Sbjct: 151 PDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFEL 210
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + PNAVT+ ++K E ++ A K+ G P+ T+NTL NG +
Sbjct: 211 IDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCK 270
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G A + +EM+ + E +D A +L D V+
Sbjct: 271 AGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVS 330
Query: 183 YTSVIRGF---CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
Y ++I G+ + W+E M ++ + P+++T+ ++ LC++GK D++ +
Sbjct: 331 YGTLIMGYFKVGKSXXWDE-------MKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCN 383
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
+++ G+ P+ YNT++ G+C G+V++A M +F+ +IL+ G C
Sbjct: 384 ELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEG 443
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++ AL L+ +SKG D V +NT+ L E + E AF L EM+ + D +T+
Sbjct: 444 MLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHN 503
Query: 360 TFIDGLCKNSYIVEAVE 376
+ L + EA E
Sbjct: 504 AILSALADAGRMKEAEE 520
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 158/340 (46%), Gaps = 27/340 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N++ K D + +++ +G PD T+N L N +CK GR+S F +
Sbjct: 221 PNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRM 280
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + R N+VT +++ LC E ++ +A L + G + +Y TLI G ++
Sbjct: 281 MDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFK 340
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G + + +MK++ I P ++TY ++I G C +
Sbjct: 341 VGKSXX---------------------------WDEMKEKEIIPSIITYGTMIGGLCRSG 373
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+++ E+++ G+ P+ T+N I+ C+ G++D+A + M++ +P+ F N
Sbjct: 374 KTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCN 433
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ G C G +++A +LF + S G +++ +I+G C+ E A L EM K
Sbjct: 434 ILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEK 493
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
+ PD +N + L + +++ A + + G D
Sbjct: 494 KLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQD 533
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 188/401 (46%), Gaps = 21/401 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVL---SLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P + + N L L + +V ++F + G+ + T+NILI C ++S
Sbjct: 8 PNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSEA 67
Query: 72 FVVLGRILR-SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
++G++ SCF P+ V++ +++ LC + ++ EA L ++ G PN T+N L++
Sbjct: 68 IGLIGKMKHFSCF-PDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVS 126
Query: 131 GLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINP 178
G + G A + + MA N G +G +D+A L +M++ + P
Sbjct: 127 GYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLP 186
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
VVTY +I G + + L+ EM +GV+PN VT+NV++ K GKMD A L
Sbjct: 187 HVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNEL 246
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
M + G P+ +NTL +G+C GR++ A + M G + + +++ C
Sbjct: 247 RKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGE 306
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
++++ A L +G D V Y TL + F++ + +DEM+ + TY
Sbjct: 307 RKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKS----XXWDEMKEKEIIPSIITY 362
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
T I GLC++ ++++ L D YN +I G
Sbjct: 363 GTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILG 403
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 164/341 (48%), Gaps = 20/341 (5%)
Query: 40 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV---VLGRILRSCFTPNAVTFTSLIKG 96
KRL+ L P+L T N LI + ++ + +++ N TF LI G
Sbjct: 1 MKRLH---LKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICG 57
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG 156
C E+++ EA L K++ F C P+ +YNT+++ L + G A +L +M + NG F
Sbjct: 58 CCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKN-NGLFP 116
Query: 157 VE-------------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
G++ +A E+ M N+ PDV TYT++I G C +EA L
Sbjct: 117 NRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLR 176
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
EM + + P+VVT+N++++ + + L+D M GV+PNA YN ++ +
Sbjct: 177 DEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKE 236
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
G+++ A ME G + +++ L NGYCK + A + EM KG+K + V
Sbjct: 237 GKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTL 296
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
NT+ L +++ A+KL + G D +Y T I G
Sbjct: 297 NTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMG 337
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 125/281 (44%), Gaps = 20/281 (7%)
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINP 178
+PN+ T NTLI L R + + V +K +F + +
Sbjct: 7 KPNLLTLNTLIKALVR--------------------YPSKPSVYLSKAIFSDVIKLGVEV 46
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
+ T+ +I G C N +EA L+ +M P+ V++N I+D LCK GK++EA LL
Sbjct: 47 NTNTFNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLL 106
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
M G+ PN +N L+ G+C G + A E+ M V +Y+ LI G CK+
Sbjct: 107 LDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKD 166
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+I+ A L EM + + P VV YN L FE + F+L DEM+ GV + TY
Sbjct: 167 GKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTY 226
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ K + A R + D +N L +G
Sbjct: 227 NVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNG 267
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 116/269 (43%), Gaps = 46/269 (17%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++ + G L ++ D + L +GL PD TYN +I +C+ G+V F
Sbjct: 357 PSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHF 416
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++++ F P+ T L++GLC E + +A LF G + T+NT+I+GL
Sbjct: 417 RNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCE 476
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G FEE A +L +M+++ + PD T+ +++ A
Sbjct: 477 EGR-------FEE----------------AFDLLAEMEEKKLGPDCYTHNAILSALADAG 513
Query: 195 DWNEAKCLLIEMMDQG-----------------------VQPNVVTFNVIMDELCKNGKM 231
EA+ + +++QG PN V F+ ++ELC GK
Sbjct: 514 RMKEAEEFMSGIVEQGKLQDQTISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKY 573
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
+A ++ Q G+ + Y +LM+G
Sbjct: 574 KDAMHMIQESTQKGIILHKSTYISLMEGL 602
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 54/139 (38%), Gaps = 23/139 (16%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH------GF 72
+FN + L + ++ L + L PD YT+N +++ GR+ G
Sbjct: 466 TFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGI 525
Query: 73 VVLGRILRSCFT-----------------PNAVTFTSLIKGLCAESRIMEAAALFTKLRV 115
V G++ + PN+V F+ I LC + + +A + +
Sbjct: 526 VEQGKLQDQTISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQ 585
Query: 116 FGCEPNVFTYNTLINGLYR 134
G + TY +L+ GL +
Sbjct: 586 KGIILHKSTYISLMEGLIK 604
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 186/385 (48%), Gaps = 23/385 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++NIL L + + L+L++++N TG+ P + TY+ L+ C+C G + +
Sbjct: 384 PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKL 443
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ FTPN VT+T+L+KG ++ +A AL +++ G N +TYNTLINGL
Sbjct: 444 YTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCV 503
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G E+ F EGFV P +TY S+I GF A
Sbjct: 504 VGRVC-------EVGEMLKRFETEGFV----------------PTAMTYNSIINGFIKAG 540
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
A + +M +G+ PN+VT+ +D CK D A ++L+ + G+RP+ YN
Sbjct: 541 MMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYN 600
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L+ GFC G ++ A ++ V M G + Y+ I GY K +E AL Y +M+ +
Sbjct: 601 SLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKE 660
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
GI D Y TL + V A KL+ EM G D T+ GLC+N I +A
Sbjct: 661 GIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDA 720
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+L + L ++ YN LI+G
Sbjct: 721 RKLLDEMNRLDIRPNVLMYNMLING 745
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 181/376 (48%), Gaps = 13/376 (3%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 95
L +F+ GL P TY +LI + G + + ++ P+ F +IK
Sbjct: 301 ALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIK 360
Query: 96 GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE- 154
GL + +A +LF ++ G P+ FTYN LI+ L + ALNL+E+M +
Sbjct: 361 GLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKP 419
Query: 155 -----------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
+ V G +D+A +L+ +M + P+VVTYT++++G +++A LL
Sbjct: 420 YIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALL 479
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
EM GV N T+N +++ LC G++ E +L G P A YN++++GF
Sbjct: 480 AEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKA 539
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
G + A ++ M + G + +Y+ I+GYCK + AL + ++ KG++PD+ Y
Sbjct: 540 GMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAY 599
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
N+L + + A ++ M +DG+ + Y +FI G + EA+ + +
Sbjct: 600 NSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIK 659
Query: 384 LKCELDIRAYNCLIDG 399
+LD Y LIDG
Sbjct: 660 EGIDLDTATYTTLIDG 675
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 189/427 (44%), Gaps = 48/427 (11%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F+++ K YD + LF + ++ + PD ++ I CK+ + +VL ++
Sbjct: 180 FDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQ 239
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+ F P TF S++ L R+ EA + +L G + +V TL++G
Sbjct: 240 DAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVR 299
Query: 140 VALNLFEE-----MASGNGEFGV-------EGFVDKAKELFLQMKDENINPDVVTYTSVI 187
AL++FEE + + + V EG +KA EL QM+D + P + VI
Sbjct: 300 KALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVI 359
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
+G W +A L EM D G+ P+ T+N+++ LC+ K+ EA L + M + GV+
Sbjct: 360 KGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVK 418
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P Y++L+ +C+ G ++ A +L+ M G T V +Y+ L+ G+ + A +L
Sbjct: 419 PYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYAL 478
Query: 308 YGEMLSKGIK-----------------------------------PDVVIYNTLFVVLFE 332
EM G+ P + YN++ +
Sbjct: 479 LAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIK 538
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
+ AF ++ +M G+ + TY +FIDG CK S A+++ +R DI A
Sbjct: 539 AGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAA 598
Query: 393 YNCLIDG 399
YN LI G
Sbjct: 599 YNSLIYG 605
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 186/398 (46%), Gaps = 23/398 (5%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+FN + L K + L + L +TG + L++ +C V +
Sbjct: 249 TFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEET 308
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
LR P VT+T LI+G E +A L ++R G P+ +N +I GL
Sbjct: 309 LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLW 368
Query: 139 IVALNLFEEMASGNGEFGV-EGF--------------VDKAKELFLQMKDENINPDVVTY 183
A++LF+EMA + G+ + F + +A L+ +M + + P +VTY
Sbjct: 369 KDAVSLFKEMA----DSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTY 424
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
S++ +C +EA L EM +G PNVVT+ +M D+A LL M Q
Sbjct: 425 HSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQ 484
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
GV N + YNTL++G C+ GRV E+ E+ G T +Y+ +ING+ K +
Sbjct: 485 NGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGS 544
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A ++Y +M +KGI P++V Y + + + A K+ ++++ G+ D Y + I
Sbjct: 545 AFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIY 604
Query: 364 GLCKNSYIVEAVELFRTLRILKCEL--DIRAYNCLIDG 399
G C+ + A+++ + +LK L +I YN I G
Sbjct: 605 GFCQEGNMSHALQVL--VLMLKDGLLPNISVYNSFITG 640
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 164/361 (45%), Gaps = 13/361 (3%)
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 110
D + +++++ K G + + S P+ + I LC A +
Sbjct: 176 DAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVL 235
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV-------EGF--- 160
K++ G P FT+N++++ L + G AL++ +E+ + + V G+
Sbjct: 236 RKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQ 295
Query: 161 --VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
V KA ++F + + + P VTYT +IRG +A L +M D G+ P+ F
Sbjct: 296 REVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEF 355
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
N+++ L + +A L M G+ P+AF YN L+ C ++ A L+ M
Sbjct: 356 NMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNE 414
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
G + +Y L+ YC N ++ A+ LY EM KG P+VV Y TL ++
Sbjct: 415 TGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDK 474
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A+ L EM+++GV+ + +TY T I+GLC + E E+ + YN +I+
Sbjct: 475 AYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIIN 534
Query: 399 G 399
G
Sbjct: 535 G 535
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 116/245 (47%), Gaps = 25/245 (10%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + ++ K D L + + GL PD+ YN LI FC+ G +SH
Sbjct: 558 PPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQ 617
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
VL +L+ PN + S I G + EA + K+ G + + TY TLI+G
Sbjct: 618 VLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFS 677
Query: 134 RTGHTIVALNLFEEM-ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ G+ AL L+ EM A GN PD +T+T++ G C
Sbjct: 678 KDGNVTFALKLYSEMVAKGN------------------------IPDHITFTALTHGLCR 713
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
D ++A+ LL EM ++PNV+ +N++++ +NGK+ EA RL D M++ + P+
Sbjct: 714 NGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTT 773
Query: 253 YNTLM 257
Y+ L+
Sbjct: 774 YDILV 778
>gi|414591629|tpg|DAA42200.1| TPA: hypothetical protein ZEAMMB73_531547 [Zea mays]
Length = 462
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 117/376 (31%), Positives = 180/376 (47%), Gaps = 45/376 (11%)
Query: 25 GCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFT 84
G L K +F + G PD+++Y I++N + G + + +L
Sbjct: 2 GSLCKYGKIKEDRDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIA 61
Query: 85 PNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNL 144
P+ TF LIK + +A +F ++R G +P+V TY T+I L R G
Sbjct: 62 PDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGK------- 114
Query: 145 FEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
+D A E F QM D+ + PD Y +I+GFC +AK L+
Sbjct: 115 ----------------MDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELIS 158
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
E+M+ G++ ++V F I++ LCK G++ +A + DL + +G+ P+A VYN LMDG+CL G
Sbjct: 159 EIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVG 218
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
++ +A +F +M S G V GEML KGIKP ++YN
Sbjct: 219 KMEKALRVFDAMVSAGIEPNVV----------------------GEMLQKGIKPSTILYN 256
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
+ LFE + A F EM G+A + TY + GL KN EA+ LF+ LR +
Sbjct: 257 IIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAM 316
Query: 385 KCELDIRAYNCLIDGL 400
++DI N +I G+
Sbjct: 317 NVKIDIITLNTMIAGM 332
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 191/411 (46%), Gaps = 37/411 (9%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M M+ P V S+ I+ A + LF + G+ PD+YT+N+LI +
Sbjct: 16 VFDTMA-MKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAY 74
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
G + ++ + P+ VT+ ++I LC ++ +A F ++ G P+
Sbjct: 75 ANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDK 134
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+ Y+ LI G F G + KAKEL ++ + + D+V
Sbjct: 135 YAYHCLIQG-----------------------FCTHGSLLKAKELISEIMNNGMRLDIVF 171
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ S+I C +A+ + ++ G+ P+ V +N++MD C GKM++A R+ D M+
Sbjct: 172 FGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMV 231
Query: 243 -------------QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
Q G++P+ +YN ++DG GR AK F M G +YS
Sbjct: 232 SAGIEPNVVGEMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYS 291
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
I++ G KN+ + A+ L+ E+ + +K D++ NT+ +F+ +VE A LF + R
Sbjct: 292 IVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 351
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G+ TY I L K + EA ++F +++ CE D R N ++ L
Sbjct: 352 GLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVREL 402
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 153/349 (43%), Gaps = 10/349 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L + D + F ++ G+ PD Y Y+ LI FC G + +
Sbjct: 97 PHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKEL 156
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ I+ + + V F S+I LC R+M+A +F G P+ YN L++G
Sbjct: 157 ISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCL 216
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G AL +F+ M S E V G +M + I P + Y +I G A
Sbjct: 217 VGKMEKALRVFDAMVSAGIEPNVVG----------EMLQKGIKPSTILYNIIIDGLFEAG 266
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
AK EM + G+ N T+++++ L KN DEA L + + V+ + N
Sbjct: 267 RTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLN 326
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
T++ G T RV AK+LF S+ G +YSI+I K +E A ++ M +
Sbjct: 327 TMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNA 386
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
G +PD + N + L + +++ RA ++ + + T +D
Sbjct: 387 GCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVD 435
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 89/179 (49%)
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
M LCK GK+ E + D M G P+ F Y +++G+ G + +LF M G
Sbjct: 1 MGSLCKYGKIKEDRDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGI 60
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
++++++LI Y ++ A+ ++ EM G+KP VV Y T+ L I +++ A +
Sbjct: 61 APDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAME 120
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
F++M GV D + Y I G C + +++A EL + LDI + +I+ L
Sbjct: 121 KFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNL 179
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 109/261 (41%), Gaps = 26/261 (9%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLY--------- 53
IFD +N+ P V +N+L + L +F + S G+ P++
Sbjct: 191 IFDLTVNVGLHPDAVV-YNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGEMLQKGIK 249
Query: 54 ----TYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
YNI+I+ + GR V + S N T++ +++GL EA L
Sbjct: 250 PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFL 309
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA-SGNGEFGV----------- 157
F +LR + ++ T NT+I G+++T A +LF ++ SG V
Sbjct: 310 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIK 369
Query: 158 EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
EG V++A+++F M++ PD V+R N+ A L ++ ++ +T
Sbjct: 370 EGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLT 429
Query: 218 FNVIMDELCKNGKMDEASRLL 238
+++D G E R L
Sbjct: 430 AMLLVDLFSSKGTCREQIRFL 450
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 203/459 (44%), Gaps = 95/459 (20%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +FN++ L + + + L+++ ++ L PD+ TY ILI+ CK + V+
Sbjct: 161 PDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVL 220
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ PN + ++ ++ GLC +I +A LF+K+R GC ++ TYN L+NG +
Sbjct: 221 FDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCK 280
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
+G+ A L + + GV G+ ++A + +M ENI PDV+
Sbjct: 281 SGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVML 340
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI---------MDE--------- 224
YT +IRG EA LL EM ++G++P+ + +N + +DE
Sbjct: 341 YTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEIS 400
Query: 225 -----------------LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+CKNG +++A + M ++G P+ +N+L++G C R+
Sbjct: 401 KHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLE 460
Query: 268 RAKELFVSME------------------------------------------------SM 279
A+ LF ME
Sbjct: 461 EARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDS 520
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G + +Y+ILING+CK I GA L+ EM KG PD V Y TL L+ + E A
Sbjct: 521 GVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDA 580
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
++F++M + G ++ TY+T + C+ + I A+ ++
Sbjct: 581 LEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVW 619
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 187/411 (45%), Gaps = 60/411 (14%)
Query: 50 PDLYTYN-----------------------------------ILINCFCKMGRVSHGFVV 74
PDL+ +N ILI+ CK + V+
Sbjct: 161 PDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVL 220
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ PN + ++ ++ GLC +I +A LF+K+R GC ++ TYN L+NG +
Sbjct: 221 FDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCK 280
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
+G+ A L + + GV G+ ++A + +M ENI PDV+
Sbjct: 281 SGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVML 340
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT +IRG EA LL EM ++G++P+ + +N ++ C G +DEA L +
Sbjct: 341 YTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEIS 400
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ PN Y+ L+ G C G +N+A+ +F ME +GC +V +++ LING CK +E
Sbjct: 401 KHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLE 460
Query: 303 GALSLYGEM-----------LSKGIKP--DVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
A L+ +M LS+G D+ + L E + +A+KL ++
Sbjct: 461 EARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDS 520
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GV D TY I+G CK I A +LF+ +++ D Y LIDGL
Sbjct: 521 GVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGL 571
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 150/327 (45%), Gaps = 23/327 (7%)
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
VL + S ++ F+ LI+ +A F +R F C+P++F +N +++ L
Sbjct: 115 VLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLV 174
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
R ++AL ++ +M N +NPDVVTY +I G C
Sbjct: 175 RKEAFLLALAVYNQMLKCN-----------------------LNPDVVTYGILIHGLCKT 211
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+A L EM D+G+ PN + +++++ LC+ K+ +A RL M G + Y
Sbjct: 212 CKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITY 271
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N L++GFC +G ++ A L + G V Y LING + + E A Y +ML
Sbjct: 272 NVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLR 331
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+ IKPDV++Y + L + +V A L EM G+ DT Y I G C Y+ E
Sbjct: 332 ENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDE 391
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A L + C + Y+ LI G+
Sbjct: 392 AESLRLEISKHDCFPNNHTYSILICGM 418
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 171/380 (45%), Gaps = 23/380 (6%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
+++ G L K ++ + + L ++ + +++LI + + G G +
Sbjct: 97 DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRD 156
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
P+ F ++ L + + A A++ ++ P+V TY LI+GL +T T
Sbjct: 157 FDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQD 216
Query: 141 ALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
AL LF+EM D I P+ + Y+ V+ G C A +A+
Sbjct: 217 ALVLFDEMT-----------------------DRGILPNQIIYSIVLSGLCQAKKIFDAQ 253
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
L +M G +++T+NV+++ CK+G +D+A LL L+ + G Y L++G
Sbjct: 254 RLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGL 313
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
R A + M V Y+I+I G + + AL+L GEM +G++PD
Sbjct: 314 FRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDT 373
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
+ YN L ++ ++ A L E+ + + TY I G+CKN I +A +F+
Sbjct: 374 ICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKE 433
Query: 381 LRILKCELDIRAYNCLIDGL 400
+ L C + +N LI+GL
Sbjct: 434 MEKLGCLPSVVTFNSLINGL 453
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 11/275 (4%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ S ++ L ++ L +L +G+ PD+ TYNILIN FCK G ++ F +
Sbjct: 491 IASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFK 550
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ P++VT+ +LI GL R +A +F ++ GC P TY T++ R
Sbjct: 551 EMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCREN 610
Query: 137 HTIVALNL-------FEEMASGNGEFGVEGF----VDKAKELFLQMKDENINPDVVTYTS 185
+ +AL++ F E F + A L+M ++ N D+ YT
Sbjct: 611 NISLALSVWMKYLRDFRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTI 670
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+ G A EA + + D + + + +++ LC +D A + ++ G
Sbjct: 671 FLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMDVFLFTLERG 730
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
R + N L+ R + A L ME+ G
Sbjct: 731 FRLMPPICNQLLCNLLHLDRKDDALFLANRMEASG 765
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 178/356 (50%), Gaps = 30/356 (8%)
Query: 51 DLYTYNILINCFCKMG----RVSHGFVV-LGRILRSCFTPNAVTFTSLIKGLCAESRIME 105
D +YN ++ C+ G R + +V + R PNAV++T++++GLCA R E
Sbjct: 82 DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141
Query: 106 AAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAK 165
A AL ++ G +V TY TLI GL AL L +EM G+G
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMC-GSG------------ 188
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
+ P+VV Y+ ++RG+C + W + + +M +G++P+V+ F ++D+L
Sbjct: 189 ----------VQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDL 238
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
CK GK +A+++ D+M+Q G+ PN YN L++ C G V A L M+ G V
Sbjct: 239 CKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDV 298
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKG--IKPDVVIYNTLFVVLFEIHQVERAFKLF 343
+Y+ LI G E++ A+S EM+ ++PDVV +N++ L +I ++ +A K+
Sbjct: 299 VTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVR 358
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ M G + TY I G + + A+ L L I E D Y+ LI+G
Sbjct: 359 EMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILING 414
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 180/384 (46%), Gaps = 26/384 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++ L L D L L + +G+ P++ Y+ L+ +C+ GR V
Sbjct: 158 VVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFE 217
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ R P+ + FT LI LC E + +AA + + G EPNV TYN LIN L + G
Sbjct: 218 DMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEG 277
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
AL L +EM D+ + PDVVTY ++I G +
Sbjct: 278 SVREALTLRKEM-----------------------DDKGVAPDVVTYNTLIAGLSGVLEM 314
Query: 197 NEAKCLLIEMM--DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+EA L EM+ D V+P+VVTFN ++ LCK G+M +A ++ ++M + G N YN
Sbjct: 315 DEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYN 374
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ GF +V A L + G F+YSILING+ K E++ A M +
Sbjct: 375 YLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQR 434
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
GIK ++ Y L + + +ERA LF+EM ++ D Y T I G CK+ +
Sbjct: 435 GIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKN-CGLDAIAYSTMIHGACKSGDMKTV 493
Query: 375 VELFRTLRILKCELDIRAYNCLID 398
+L + + D Y+ LI+
Sbjct: 494 KQLIQDMLDEGLAPDAVTYSMLIN 517
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 176/385 (45%), Gaps = 22/385 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L ++ + V +F+ ++ G+ PD+ + LI+ CK G+ V
Sbjct: 191 PNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKV 250
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ PN VT+ LI LC E + EA L ++ G P+V TYNTLI GL
Sbjct: 251 KDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSG 310
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
A++ EEM G D + PDVVT+ SVI G C
Sbjct: 311 VLEMDEAMSFLEEMIQG---------------------DTVVEPDVVTFNSVIHGLCKIG 349
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+A + M ++G N+VT+N ++ + K+ A L+D + G+ P++F Y+
Sbjct: 350 RMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYS 409
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L++GF V+RA++ +M G +F Y L+ C+ +E A+ L+ EM K
Sbjct: 410 ILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEM-DK 468
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
D + Y+T+ + ++ +L +M +G+A D TY I+ K + EA
Sbjct: 469 NCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEA 528
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+ + + D+ ++ LI G
Sbjct: 529 ERVLKQMTASGFVPDVAVFDSLIKG 553
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 167/359 (46%), Gaps = 28/359 (7%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ R P V ++N+L L K L+L K ++ G+ PD+ TYN LI +
Sbjct: 253 MMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVL 312
Query: 67 RVSHGFVVLGRILR--SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFT 124
+ L +++ + P+ VTF S+I GLC R+ +A + + GC N+ T
Sbjct: 313 EMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVT 372
Query: 125 YNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
YN LI G R +A+NL +E+A + G + PD TY+
Sbjct: 373 YNYLIGGFLRVHKVKMAMNLMDELA-------ISG----------------LEPDSFTYS 409
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ- 243
+I GF + + A+ L M +G++ + + ++ +C+ G M+ A L + M +
Sbjct: 410 ILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKN 469
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G+ +A Y+T++ G C +G + K+L M G +YS+LIN Y K ++E
Sbjct: 470 CGL--DAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEE 527
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A + +M + G PDV ++++L Q ++ KL EM+ VA D T I
Sbjct: 528 AERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTII 586
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 178/394 (45%), Gaps = 37/394 (9%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
++ R P V F L L K + + GL P++ TYN+LIN CK G
Sbjct: 219 MSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGS 278
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG---CEPNVFT 124
V + + P+ VT+ +LI GL + EA + ++ + G EP+V T
Sbjct: 279 VREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEM-IQGDTVVEPDVVT 337
Query: 125 YNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
+N++I+GL + G A+ + E MA + ++VTY
Sbjct: 338 FNSVIHGLCKIGRMTQAVKVREMMA-----------------------ERGCMCNLVTYN 374
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+I GF + A L+ E+ G++P+ T++++++ K ++D A + L M Q
Sbjct: 375 YLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQR 434
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G++ F Y L+ C G + RA LF M+ C +YS +I+G CK+ +++
Sbjct: 435 GIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDK-NCGLDAIAYSTMIHGACKSGDMKTV 493
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L +ML +G+ PD V Y+ L + ++ +E A ++ +M G D + + I G
Sbjct: 494 KQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKG 553
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
Y E +T ++LK ++RA N D
Sbjct: 554 -----YSAEG----QTDKVLKLIHEMRAKNVAFD 578
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 113/227 (49%), Gaps = 5/227 (2%)
Query: 179 DVVTYTSVIRGFCY--ANDWNEAKCLLIEMMDQG---VQPNVVTFNVIMDELCKNGKMDE 233
D V+Y +V+ C + +A+ LL++M + +PN V++ +M LC + + E
Sbjct: 82 DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A LL M GVR + Y TL+ G C ++ A EL M G V YS L+
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLR 201
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
GYC++ + ++ +M +GIKPDV+++ L L + + +A K+ D M + G+
Sbjct: 202 GYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEP 261
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ TY I+ LCK + EA+ L + + D+ YN LI GL
Sbjct: 262 NVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGL 308
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 85/218 (38%), Gaps = 50/218 (22%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF---------------- 62
++N L G + ++L L +GL PD +TY+ILIN F
Sbjct: 372 TYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTM 431
Query: 63 -------------------CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRI 103
C+ G + + + ++C +A+ ++++I G C +
Sbjct: 432 RQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGL-DAIAYSTMIHGACKSGDM 490
Query: 104 MEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM-ASG----------- 151
L + G P+ TY+ LIN + G A + ++M ASG
Sbjct: 491 KTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSL 550
Query: 152 -NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
G + EG DK +L +M+ +N+ D +++IR
Sbjct: 551 IKG-YSAEGQTDKVLKLIHEMRAKNVAFDPKIISTIIR 587
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 184/381 (48%), Gaps = 27/381 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S+ IL L + + L L + G P+L+TY +LI CK GR+ V+L +
Sbjct: 255 SYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEM 314
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
R P+ T+ ++I G C R+ +A + T + GC P+ +TYN+LI+GL
Sbjct: 315 PRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGL------ 368
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
G D+A+EL +P V+T+T++I G+C A ++
Sbjct: 369 ------------------CGGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDD 410
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A + M+ + ++ + V++ L K ++ EA L+ + G+ PN +Y +++D
Sbjct: 411 ALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIID 470
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
+C G+V A E+F E GC ++YS LI G +++++ A++L +M GI P
Sbjct: 471 AYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITP 530
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
V+ Y TL + H+ + AF+LF+ M+++G+ D Y D LCK+ EA
Sbjct: 531 GVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL 590
Query: 379 RTLRILKCELDIRAYNCLIDG 399
++ L Y L+DG
Sbjct: 591 VKKGVV---LTKVTYTSLVDG 608
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 118/393 (30%), Positives = 196/393 (49%), Gaps = 31/393 (7%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR--V 68
R + P C +N+ L + + + L+ +L GL PD TYN +I +CK G +
Sbjct: 143 RLALSPKC-YNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAI 201
Query: 69 SHGFVVLGRILR-SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+H + R+LR S + T +L+ G C + +A L + + GC N ++Y
Sbjct: 202 AHRYF---RLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTI 258
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
LI GL T V +A L L M + +P++ TYT +I
Sbjct: 259 LIQGLCET-----------------------RCVREALVLLLMMLQDGCSPNLHTYTLLI 295
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
RG C ++A+ LL EM +GV P+V T+N ++D CK+G++ +A + LM G
Sbjct: 296 RGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCN 355
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P+ + YN+L+ G C G+ + A+EL + G + TV +++ +INGYCK ++I+ AL +
Sbjct: 356 PDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRV 414
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
M+S K D+ Y L VL + H+++ A +E+ +G++ + Y + ID CK
Sbjct: 415 KSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCK 474
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ A+E+F+ C + Y+ LI GL
Sbjct: 475 VGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGL 507
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 182/390 (46%), Gaps = 28/390 (7%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V +F + K + D L + + S+ DL Y +LI+ K R+
Sbjct: 386 RGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKE 445
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
L I + +PN V +TS+I C ++ A +F GC PN +TY++LI
Sbjct: 446 AKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIY 505
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
GL + + + KA L +M+++ I P V+TYT++I+G
Sbjct: 506 GLIQ-----------------------DQKLHKAMALITKMQEDGITPGVITYTTLIQGQ 542
Query: 191 CYANDWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
C ++++ A L EMM+Q G+ P+ +NV+ D LCK+G+ +EA L ++ GV
Sbjct: 543 CKKHEFDNA-FRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VKKGVVLT 598
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
Y +L+DGF G A L M + GC +YS+L+ CK K++ ALS+
Sbjct: 599 KVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILD 658
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
+M +G+K ++V Y + + + + + A +F+EM G TY FI CK
Sbjct: 659 QMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIG 718
Query: 370 YIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I EA L + D+ YN I+G
Sbjct: 719 RIEEAGHLIGEMERNGVAPDVVTYNVFING 748
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 167/348 (47%), Gaps = 24/348 (6%)
Query: 53 YTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 112
Y+Y ILI C+ V V+L +L+ +PN T+T LI+GLC E RI +A L +
Sbjct: 254 YSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDE 313
Query: 113 LRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMK 172
+ G P+V+TYN +I+G ++G AL + + + GNG
Sbjct: 314 MPRRGVVPSVWTYNAMIDGYCKSGRLKDALGI-KTLMEGNG------------------- 353
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 232
NPD TY S+I G C +EA+ LL + +G P V+TF I++ CK K+D
Sbjct: 354 ---CNPDDWTYNSLIHGLCGGKP-DEAEELLNGAIARGFSPTVITFTNIINGYCKAEKID 409
Query: 233 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
+A R+ +MI + + Y L+ R+ AK+ + + G + V Y+ +I
Sbjct: 410 DALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSII 469
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
+ YCK ++ AL ++ +G +P+ Y++L L + ++ +A L +MQ DG+
Sbjct: 470 DAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGIT 529
Query: 353 ADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY T I G CK A LF + D +AYN L D L
Sbjct: 530 PGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDAL 577
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 179/379 (47%), Gaps = 15/379 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ +L L K + + GL P++ Y +I+ +CK+G+V V
Sbjct: 429 AYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLT 488
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PNA T++SLI GL + ++ +A AL TK++ G P V TY TLI G +
Sbjct: 489 EHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEF 548
Query: 139 IVALNLFEEMASGNG----EFGVEGFVD------KAKELFLQMKDENINPDVVTYTSVIR 188
A LFE M NG E D +A+E + + + + VTYTS++
Sbjct: 549 DNAFRLFE-MMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTKVTYTSLVD 607
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
GF A + A L+ +M+++G + + T++V++ LCK K++EA +LD M GV+
Sbjct: 608 GFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKG 667
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
N Y ++ G+ + AK +F M S G + +Y++ I+ YCK IE A L
Sbjct: 668 NIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLI 727
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY----RTFIDG 364
GEM G+ PDVV YN + ++ AF M + WTY + F+
Sbjct: 728 GEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKM 787
Query: 365 LCKNSYIVEAVELFRTLRI 383
N++ V+ ++ +++
Sbjct: 788 SLANAHYVDTSGMWNWIKL 806
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 175/443 (39%), Gaps = 66/443 (14%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L K +D LF+ + GL PD YN+L + CK GR +
Sbjct: 530 PGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF 589
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ VT+TSL+ G AAAL K+ GC+ + TY+ L+ L +
Sbjct: 590 L---VKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCK 646
Query: 135 TGHTIVALNLFEEMA----SGN--------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
AL++ ++M GN E EG D AK +F +M P +T
Sbjct: 647 QKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAIT 706
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV--------------------IM 222
YT I +C EA L+ EM GV P+VVT+NV ++
Sbjct: 707 YTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMI 766
Query: 223 DELCKNG-------------------------------KMDEASRLLDLMIQIGVRPNAF 251
D C+ K+D +LL+ M++ G+ P A
Sbjct: 767 DASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAV 826
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
Y++++ GFC R+ A L M + Y++LI C K E A S M
Sbjct: 827 TYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNM 886
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
+ G +P + Y+ L L + ++A LF ++ + ++ DGL K ++
Sbjct: 887 IECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHV 946
Query: 372 VEAVELFRTLRILKCELDIRAYN 394
+L + C +D Y+
Sbjct: 947 DICSQLLSAMENRHCRIDSETYS 969
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 158/353 (44%), Gaps = 31/353 (8%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++++L L K K + LS+ ++ G+ ++ Y I+I+ K G+ H + +
Sbjct: 636 TYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEM 695
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ S P+A+T+T I C RI EA L ++ G P+V TYN ING G+
Sbjct: 696 ISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYM 755
Query: 139 IVA----------------------LNLFEEMASGNGEF----GVEGFV--DKAKELFLQ 170
A L F +M+ N + G+ ++ D +L +
Sbjct: 756 DCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLER 815
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M +NP VTY+S+I GFC A EA LL M+ + + PN + +++ C
Sbjct: 816 MVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKL 875
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
++A+ + MI+ G +P+ Y+ L+ G C G ++AK LF + M H ++ I
Sbjct: 876 FEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKI 935
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
L +G K ++ L M ++ + D Y+ +V IH+ ++ +
Sbjct: 936 LNDGLLKAGHVDICSQLLSAMENRHCRIDSETYS---MVTNNIHEASGMYESY 985
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 186/381 (48%), Gaps = 23/381 (6%)
Query: 15 PPVCSFNILFGCLAKNKHY--DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
P + + N + L+++ L +F+ L L P+ YT+N+L++ C G ++
Sbjct: 169 PSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADAL 228
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
L + +P+AVT+ +L+ C + + EA AL +++ G P TYNTL++
Sbjct: 229 ATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAF 288
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGF---------VDKAKELFLQMKDE-----NINP 178
R G A + E M + E + + K E F ++KDE P
Sbjct: 289 ARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAF-RLKDEMERLGTALP 347
Query: 179 DVVTYTSVIRGFCYANDW---NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
DVVTY +++ C+ W ++A LL EM D+GV+P +VT N+++ LCK GK++EA
Sbjct: 348 DVVTYNTLVDA-CF--KWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEAL 404
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
L+ + + G+ P+ YNTL+D +C G V +A L M G F+ + ++
Sbjct: 405 GKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNL 464
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
CK K E A L +G PD V Y T+ F+ + E A +L+D+M +
Sbjct: 465 CKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSI 524
Query: 356 WTYRTFIDGLCKNSYIVEAVE 376
TY T I GLC+ + EA++
Sbjct: 525 STYNTLIKGLCRMERLKEAID 545
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 176/395 (44%), Gaps = 13/395 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+FN+L L+ + GL PD TYN L+N C+ G + +L R+
Sbjct: 210 TFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARM 269
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
R P T+ +L+ I +A + + +G EP++ TYN L GL + G
Sbjct: 270 KRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKV 329
Query: 139 IVALNLFEEMAS-GNGEFGVEGF---VDK---------AKELFLQMKDENINPDVVTYTS 185
A L +EM G V + VD A L +M+D+ + P +VT+
Sbjct: 330 DEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNI 389
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
V++ C EA L ++ ++G+ P+V+T+N ++D CK G + +A L+D M+ G
Sbjct: 390 VVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKG 449
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
++ + F NT++ C R A+EL S G SY ++ Y K E AL
Sbjct: 450 LKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPAL 509
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
L+ +M+ + + P + YNTL L + +++ A +E G+ D TY I
Sbjct: 510 RLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAY 569
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
CK + A + + D+ N L++GL
Sbjct: 570 CKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGL 604
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 191/434 (44%), Gaps = 48/434 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L + +L R+ G+ P TYN L++ F ++G + V
Sbjct: 241 PDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKV 300
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE-PNVFTYNTLINGLY 133
+ + F P+ T+ L GLC ++ EA L ++ G P+V TYNTL++ +
Sbjct: 301 VESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACF 360
Query: 134 RTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVV 181
+ + AL L EEM + + EG +++A ++ +E + PDV+
Sbjct: 361 KWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVI 420
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS------ 235
TY ++I +C A + +A L+ EM+ +G++ + T N ++ LCK + ++A
Sbjct: 421 TYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSP 480
Query: 236 -----------------------------RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
RL D MI+ + P+ YNTL+ G C R+
Sbjct: 481 PQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERL 540
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
A + G +Y+I+I+ YCK ++E A + +M+ KPDVV NTL
Sbjct: 541 KEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTL 600
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
L ++++A KLF+ G D TY T I +CK + A+ F + +
Sbjct: 601 MNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGL 660
Query: 387 ELDIRAYNCLIDGL 400
+ D YN ++ L
Sbjct: 661 QPDAFTYNVVLSAL 674
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 173/362 (47%), Gaps = 12/362 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F + D M + + P V ++N L K + L L + + G+ P L T+NI++
Sbjct: 333 FRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVK 392
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK G++ L +I P+ +T+ +LI C + +A L ++ G +
Sbjct: 393 SLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKM 452
Query: 121 NVFTYNTLINGLYRTGHTIVALNLF----------EEMASGN--GEFGVEGFVDKAKELF 168
+ FT NT++ L + A L +E++ G + E + A L+
Sbjct: 453 DTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLW 512
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
QM + + P + TY ++I+G C EA L E +++G+ P+ T+N+I+ CK
Sbjct: 513 DQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKE 572
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G ++ A R + M++ +P+ NTLM+G CL G++++A +LF S G V +Y
Sbjct: 573 GDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITY 632
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ LI CK +++ AL + +M KG++PD YN + L E + E A + ++
Sbjct: 633 NTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLAD 692
Query: 349 DG 350
G
Sbjct: 693 SG 694
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 167/403 (41%), Gaps = 52/403 (12%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + NI+ L K + L +++ GL PD+ TYN LI+ +CK G V+ F +
Sbjct: 382 PTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTL 441
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEA-----------------------AALFT 111
+ ++ + T +++ LC R +A AA F
Sbjct: 442 MDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFK 501
Query: 112 K------LRVFGCE------PNVFTYNTLINGL---YRTGHTIVALNLFEEMASGNGE-- 154
+ LR++ P++ TYNTLI GL R I LN F E E
Sbjct: 502 EYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETT 561
Query: 155 -------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
+ EG ++ A +M + + PDVVT +++ G C ++A L +
Sbjct: 562 YNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWV 621
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
++G + +V+T+N ++ +CK G +D A D M G++P+AF YN ++ GR
Sbjct: 622 EKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSE 681
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKN---KEIEGALSLYGEMLSKGIKPDVVIYN 324
A + + G F+ +L KE EG E K + Y
Sbjct: 682 EAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPE--AESSEKAQDNALETYM 739
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
L Q++ A + DEM + G+ D TY T ++GL K
Sbjct: 740 ERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIK 782
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 112/279 (40%), Gaps = 55/279 (19%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
++D M+ R P + ++N L L + + + GL PD TYNI+I+ +
Sbjct: 511 LWDQMIE-RKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAY 569
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK---------- 112
CK G + + F +++ + F P+ VT +L+ GLC ++ +A LF
Sbjct: 570 CKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDV 629
Query: 113 -------------------------LRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
+ V G +P+ FTYN +++ L G + A N+ +
Sbjct: 630 ITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHK 689
Query: 148 MA----------------SGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
+A S E V+ K + + +N + TY + G C
Sbjct: 690 LADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNA---LETYMERLNGLC 746
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
EAK +L EMM +G+ + T+ +M+ L K K
Sbjct: 747 TGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQK 785
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 2/169 (1%)
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV--NRAKELFVSMESMGCTHTVFSYSIL 291
A L L + GVRP+ N ++ + + ++F S+ + +++++L
Sbjct: 155 AQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLL 214
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
++ +C + AL+ M G+ PD V YNTL + A L M+RDG+
Sbjct: 215 VHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGI 274
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
A TY T + + +I +A ++ ++ E D+R YN L GL
Sbjct: 275 APTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGL 323
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 203/459 (44%), Gaps = 95/459 (20%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +FN++ L + + + L+++ ++ L PD+ TY ILI+ CK + V+
Sbjct: 161 PDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVL 220
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ PN + ++ ++ GLC +I +A LF+K+R GC ++ TYN L+NG +
Sbjct: 221 FDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCK 280
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
+G+ A L + + GV G+ ++A + +M ENI PDV+
Sbjct: 281 SGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVML 340
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI---------MDE--------- 224
YT +IRG EA LL EM ++G++P+ + +N + +DE
Sbjct: 341 YTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEIS 400
Query: 225 -----------------LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+CKNG +++A + M ++G P+ +N+L++G C R+
Sbjct: 401 KHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLE 460
Query: 268 RAKELFVSME------------------------------------------------SM 279
A+ LF ME
Sbjct: 461 EARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDS 520
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G + +Y+ILING+CK I GA L+ EM KG PD V Y TL L+ + E A
Sbjct: 521 GVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDA 580
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
++F++M + G ++ TY+T + C+ + I A+ ++
Sbjct: 581 LEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVW 619
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 198/442 (44%), Gaps = 60/442 (13%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYN---------------------- 56
+F++L ++ + + F + PDL+ +N
Sbjct: 130 AFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQM 189
Query: 57 -------------ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRI 103
ILI+ CK + V+ + PN + ++ ++ GLC +I
Sbjct: 190 LKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKI 249
Query: 104 MEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF--- 160
+A LF+K+R GC ++ TYN L+NG ++G+ A L + + GV G+
Sbjct: 250 FDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCL 309
Query: 161 ---------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
++A + +M ENI PDV+ YT +IRG EA LL EM ++G+
Sbjct: 310 INGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGL 369
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
+P+ + +N ++ C G +DEA L + + PN Y+ L+ G C G +N+A+
Sbjct: 370 RPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQH 429
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM-----------LSKGIKP-- 318
+F ME +GC +V +++ LING CK +E A L+ +M LS+G
Sbjct: 430 IFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVF 489
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
D+ + L E + +A+KL ++ GV D TY I+G CK I A +LF
Sbjct: 490 DIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLF 549
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
+ +++ D Y LIDGL
Sbjct: 550 KEMQLKGHMPDSVTYGTLIDGL 571
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 152/329 (46%), Gaps = 23/329 (6%)
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
+ VL + S ++ F+ LI+ +A F+ +R F C+P++F +N +++
Sbjct: 113 WKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHF 172
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
L R ++AL ++ QM N+NPDVVTY +I G C
Sbjct: 173 LVRKEAFLLALAVYN-----------------------QMLKCNLNPDVVTYGILIHGLC 209
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
+A L EM D+G+ PN + +++++ LC+ K+ +A RL M G +
Sbjct: 210 KTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLI 269
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
YN L++GFC +G ++ A L + G V Y LING + + E A Y +M
Sbjct: 270 TYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKM 329
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
L + IKPDV++Y + L + +V A L EM G+ DT Y I G C Y+
Sbjct: 330 LRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYL 389
Query: 372 VEAVELFRTLRILKCELDIRAYNCLIDGL 400
EA L + C + Y+ LI G+
Sbjct: 390 DEAESLRLEISKHDCFPNNHTYSILICGM 418
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 90/181 (49%)
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
++I+ +L K + ++L + ++ ++ ++ L++ + G +A E F M
Sbjct: 97 DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRD 156
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
C +F+++++++ + + AL++Y +ML + PDVV Y L L + + +
Sbjct: 157 FDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQD 216
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A LFDEM G+ + Y + GLC+ I +A LF +R C D+ YN L++
Sbjct: 217 ALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLN 276
Query: 399 G 399
G
Sbjct: 277 G 277
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 122/293 (41%), Gaps = 16/293 (5%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ S ++ L ++ L +L +G+ PD+ TYNILIN FCK G ++ F +
Sbjct: 491 IASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFK 550
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ P++VT+ +LI GL R +A +F ++ GC P TY T++ R
Sbjct: 551 EMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCREN 610
Query: 137 HTIVALNL-------FEEMASGNGEFGVEGF----VDKAKELFLQMKDENINPDVVTYTS 185
+ +AL++ F E F + A L+M ++ N D+ YT
Sbjct: 611 NISLALSVWMKYLRDFRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTI 670
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+ G A EA + + D + + + +++ LC +D A + ++ G
Sbjct: 671 FLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMDVFLFTLERG 730
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
R + N L+ R + A L ME+ G +F I CK+
Sbjct: 731 FRLMPPICNQLLCNLLHLDRKDDALFLANRMEASGTELCIF-----IGANCKD 778
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 194/411 (47%), Gaps = 13/411 (3%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
C+ + M+ + P ++ G L K + D+ L +L G P+L+ YN LIN
Sbjct: 309 CLMNEMVELGFVPTEAAVSGLVDG-LRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINA 367
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK + ++ + N VT++ LI C + A + F ++ G
Sbjct: 368 LCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRET 427
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFL 169
++ YN+LING + G A L+ +M + E F V+KA +L+
Sbjct: 428 IYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYR 487
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M ++ I P V T+T++I G C N+ EA L EM+++ ++P VT+NV+++ CK
Sbjct: 488 EMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAH 547
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
MD+A LL+ M+ G+ P+ + Y L+ G C TGRV+ AK+ + YS
Sbjct: 548 NMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYS 607
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
L++GYC + ALS EM+ +GI D+V + L + ++R F L +M
Sbjct: 608 ALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQ 667
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G+ D+ Y + ID K ++ E + KC ++ Y ++GL
Sbjct: 668 GLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGL 718
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 182/383 (47%), Gaps = 23/383 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ ++N+L L K L + K L GL D+ TY L+ FC++ + G ++
Sbjct: 253 IVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMN 312
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ F P + L+ GL + I A L KL FG PN+F YN LIN L +
Sbjct: 313 EMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCK-- 370
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
GE +DKA+ L+ M N+ + VTY+ +I FC
Sbjct: 371 ----------------GE-----DLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGML 409
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+ A+ M++ G++ + +N +++ CK G + A L MI G+ P A + TL
Sbjct: 410 DVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTL 469
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ G+C +V +A +L+ M +V++++ LI G C E+ A L+ EM+ + I
Sbjct: 470 ISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKI 529
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
KP V YN + + H +++AF+L ++M +G+ DT+TYR I GLC + A +
Sbjct: 530 KPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKD 589
Query: 377 LFRTLRILKCELDIRAYNCLIDG 399
L +L+ Y+ L+ G
Sbjct: 590 FIDDLHKKNLKLNEMCYSALLHG 612
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 175/397 (44%), Gaps = 13/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F L K+ + L++ +N + P +YT+ LI C ++ +
Sbjct: 461 PTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKL 520
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ P VT+ +I+G C + +A L + G P+ +TY LI+GL
Sbjct: 521 FDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCS 580
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
TG A + +++ N + +G + +A +M IN D+V
Sbjct: 581 TGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVC 640
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ +I G D LL +M DQG++P+ V + ++D K G ++ LDLM+
Sbjct: 641 HAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMV 700
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
PN Y M+G C G ++RA LF M + + +Y ++ K ++
Sbjct: 701 TEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMK 760
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ EML KG+ + YN L ++ ++ A K+ EM +G+ D TY T I
Sbjct: 761 EATDLHHEML-KGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTII 819
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
C++ + AVEL+ T+ E D A+N LI G
Sbjct: 820 YEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYG 856
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 169/375 (45%), Gaps = 25/375 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+ + P V ++N++ K + D L + + GL PD YTY LI+
Sbjct: 520 LFDEMVERKIKPTEV-TYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGL 578
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C GRVS + + + N + +++L+ G C + R+ EA + ++ G ++
Sbjct: 579 CSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDL 638
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+ LI+G + ++M G L +M D+ + PD V
Sbjct: 639 VCHAVLIDGAMKQ----------QDMKRLFG-------------LLKKMYDQGLRPDSVI 675
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YTS+I + + ++ L M+ + PNVVT+ M+ LCK G++D A L + M+
Sbjct: 676 YTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKML 735
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ PN+ Y +D G + A +L M G +Y+ILI G+CK +
Sbjct: 736 TANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLANTATYNILIRGFCKLGRLI 794
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A + EM GI PD + Y+T+ V A +L+D M R GV D+ + I
Sbjct: 795 EATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLI 854
Query: 363 DGLCKNSYIVEAVEL 377
G C N + +A EL
Sbjct: 855 YGCCVNGALDKAFEL 869
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 187/413 (45%), Gaps = 69/413 (16%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
L + +D V+ L L +T L P++ T + ++N ++ + + V + + P+
Sbjct: 159 LQNTRVFDAVVVLRLMLGNT-LLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPD 217
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF-----TYNTLINGLYRTGHTIVA 141
T +++I+ LC A K ++ E N F TYN LI+GL + G + A
Sbjct: 218 PYTCSAVIRSLCELKDFCRA-----KEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEA 272
Query: 142 LNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
L E+ ++++ + DVVTY +++ GFC +++ C
Sbjct: 273 L-----------------------EVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGIC 309
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
L+ EM++ G P + ++D L K G +D A L+ + + G PN FVYN L++ C
Sbjct: 310 LMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALC 369
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
+++A+ L+ +M SM +YSILI+ +CK ++ A S +G M+ GI+ +
Sbjct: 370 KGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIY 429
Query: 322 IYNTL-------------------------------FVVLFEIH----QVERAFKLFDEM 346
YN+L F L + QVE+AFKL+ EM
Sbjct: 430 PYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREM 489
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+A +T+ I GLC + + EA +LF + K + YN +I+G
Sbjct: 490 NEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEG 542
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 19/170 (11%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
++NIL K + + G+FPD TY+ +I C+ G V +
Sbjct: 777 TATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWD 836
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP---------NVFTYNT 127
+LR P++V F LI G C + +A L + G +P ++ N
Sbjct: 837 TMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNF 896
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVE----------GFVDKAKEL 167
L++G TG AL L+ M + + +E G + K++EL
Sbjct: 897 LMHGGCVTGEVDTALRLYHSMLTRAVKLSLEMWKCLYLLSYGVISKSEEL 946
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 76/194 (39%), Gaps = 18/194 (9%)
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+ + + +F +++ L +N A+ LL ++ G P FV+
Sbjct: 88 LHKNMNHTTTSFAILVHALVQNKLFWPANSLLHTLLLRGSDPK-FVF------------- 133
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
E F+ + + L++ Y +N + A+ + ML + P+V + +
Sbjct: 134 ----EKFLESHKQCKFSSTLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAI 189
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
L I + +++FDE GV D +T I LC+ A E + +
Sbjct: 190 LNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRF 249
Query: 387 ELDIRAYNCLIDGL 400
+L I YN LI GL
Sbjct: 250 DLSIVTYNVLIHGL 263
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 78/203 (38%), Gaps = 35/203 (17%)
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
+A +L M+ + P V T + I++ L + K + D + GV+P+ + + ++
Sbjct: 166 DAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVI 225
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
C RAKE + MES ++ +Y++LI+G CK + AL + + K
Sbjct: 226 RSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREK--- 282
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
G+ D TY T + G C+ + + L
Sbjct: 283 --------------------------------GLKEDVVTYCTLVLGFCRVQQFDDGICL 310
Query: 378 FRTLRILKCELDIRAYNCLIDGL 400
+ L A + L+DGL
Sbjct: 311 MNEMVELGFVPTEAAVSGLVDGL 333
>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 889
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 180/366 (49%), Gaps = 18/366 (4%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
P+ + YNI+IN C GR S ++ P VTF ++I C E ++EA L
Sbjct: 299 PNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKL 358
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM---------------ASGNGE 154
F L+ G PN YNTL+NG + A L+EEM SG+ +
Sbjct: 359 FDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYK 418
Query: 155 FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
+G E + L + + PD + + G C+A +EA L++M+++G+ P+
Sbjct: 419 YGRE---EDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPS 475
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
++ FN ++ + G D+A LM+ G+ P+ ++L+ G + GR+ A EL
Sbjct: 476 IIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIG 535
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
M G + ++++L++ + K ++ GA SL+GEM +GI PDVV ++ L +
Sbjct: 536 QMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQG 595
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
VE A+ +F EM R G+ + + Y + I G CK + EA++L + +R DI N
Sbjct: 596 LVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTN 655
Query: 395 CLIDGL 400
+I GL
Sbjct: 656 MIIGGL 661
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 173/369 (46%), Gaps = 18/369 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FNIL K + L K ++ GL PD ++I ++ C GR+
Sbjct: 404 PDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEF 463
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCA---ESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
L +L +P+ + F S+I E + EA L FG P+ T ++L+ G
Sbjct: 464 LMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVH---FGLTPSPSTCSSLLMG 520
Query: 132 LYRTGHTIVALNLFEEM-----ASGNGEFGV-------EGFVDKAKELFLQMKDENINPD 179
L G A L +M + N F V G V A+ L+ +M+ I PD
Sbjct: 521 LSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPD 580
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
VV +++ I G EA + +EM+ +G+ PN +N ++ CK GK++EA +L
Sbjct: 581 VVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEK 640
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
+M G+ P+ F N ++ G C GR+ A +F+ M G + + +Y+ LINGYCK
Sbjct: 641 VMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAF 700
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++ A +L M + G PD+ YN ++ RA + DE+ G+ +T TY
Sbjct: 701 DMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYN 760
Query: 360 TFIDGLCKN 368
+ ++G+C +
Sbjct: 761 SMLNGVCSD 769
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 199/449 (44%), Gaps = 58/449 (12%)
Query: 5 DYMLNMRPS---PPPVCSFNILF-GCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ +L++ P P ++NI+ C + + D L+ F + G P + T+N +IN
Sbjct: 286 ESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDA-LAWFNLMIERGCNPTVVTFNTVIN 344
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
FCK G V + + F+PNA+ + +L+ G I +A L+ ++R G P
Sbjct: 345 AFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAP 404
Query: 121 NVFTYNTLINGLYRTGH-----------TIVAL----NLFEEMASGNGEFGVEGFVDKAK 165
+ T+N L++G Y+ G +++ L +LF+ SG G +D+A
Sbjct: 405 DGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSG---LCWAGRLDEAM 461
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYAN------------------------------- 194
E + M ++ ++P ++ + SVI + A
Sbjct: 462 EFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGL 521
Query: 195 ----DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
EA L+ +M+++G+ N + F V++D+ K G + A L M + G+ P+
Sbjct: 522 SINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDV 581
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
++ +DG G V A +F+ M G F+Y+ LI G+CK ++ AL L
Sbjct: 582 VAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKV 641
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M +G+ PD+ N + L + ++ A +F +M + G++ D TY T I+G CK
Sbjct: 642 MRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFD 701
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDG 399
+V A L + D+ YN I G
Sbjct: 702 MVNADNLVNRMYASGSNPDLTTYNIRIHG 730
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 182/413 (44%), Gaps = 51/413 (12%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 95
L + R+ G+ P IL ++G + + + ++R P TF+ +I
Sbjct: 215 ALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIIL 274
Query: 96 GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN--- 152
G C + I +L + F CEPN F YN +IN G T AL F M
Sbjct: 275 GFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNP 334
Query: 153 ---------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
F EG V +A++LF +K+ +P+ + Y +++ G+ + ++A L
Sbjct: 335 TVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLY 394
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
EM +G+ P+ +TFN+++ K G+ ++ RLL + +G+ P+ +++ + G C
Sbjct: 395 EEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWA 454
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCK-------------------------- 297
GR++ A E + M G + ++ +++ +I Y +
Sbjct: 455 GRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTC 514
Query: 298 ---------NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
N ++ A L G+M+ KG+ + + + L F+ V A L+ EM+R
Sbjct: 515 SSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMER 574
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL--DIRAYNCLIDG 399
G+ D + FIDGL K + EA +F L +L+ L + AYN LI G
Sbjct: 575 RGIFPDVVAFSAFIDGLSKQGLVEEAYNVF--LEMLRKGLIPNNFAYNSLICG 625
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 174/426 (40%), Gaps = 52/426 (12%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P F+I L D + + GL P + +N +I + + G F
Sbjct: 439 PDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEA 498
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ TP+ T +SL+ GL R+ EA L ++ G N + L++ ++
Sbjct: 499 YKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFK 558
Query: 135 TGHTIVALNLFEEMASGNGEF-------------GVEGFVDKAKELFLQMKDENINPDVV 181
G + A +L+ EM G F +G V++A +FL+M + + P+
Sbjct: 559 RGDVVGAQSLWGEMER-RGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNF 617
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y S+I GFC NEA L M +G+ P++ T N+I+ LCK G+M A + M
Sbjct: 618 AYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDM 677
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
Q G+ P+ YNTL++G+C + A L M + G + +Y+I I+G+C ++ +
Sbjct: 678 HQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRM 737
Query: 302 EGALSLYGEMLSKGIKPD----------------------------------VVIYNTLF 327
A+ + E++S GI P+ VV N L
Sbjct: 738 NRAVLMLDELVSAGIVPNTVTYNSMLNGVCSDILDRAMILTARLLKMAFVPNVVTANLLL 797
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
++ ER ++ A D TY+ + K +I+E + R
Sbjct: 798 SQFYKQGMPERTLMWGHKLSEIPYAFDEITYKI----MDKAHHILEDADFSRVTSAKSLF 853
Query: 388 LDIRAY 393
LD Y
Sbjct: 854 LDFLMY 859
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 118/249 (47%), Gaps = 5/249 (2%)
Query: 152 NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
N E G + A E+ +M++ + P + + D+ L +++ +G
Sbjct: 208 NAEMGFQ-----ALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGP 262
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
QP TF+ I+ C+ G + LL LM + PNAF YN +++ C+ GR + A
Sbjct: 263 QPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALA 322
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
F M GC TV +++ +IN +CK + A L+ + G P+ ++YNTL
Sbjct: 323 WFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYV 382
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIR 391
++ ++++A L++EM++ G+A D T+ + G K + L + + +L D
Sbjct: 383 KMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRS 442
Query: 392 AYNCLIDGL 400
++ + GL
Sbjct: 443 LFDISVSGL 451
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 148/360 (41%), Gaps = 12/360 (3%)
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 110
D + L+ F +LGR+ P+A L K L LF
Sbjct: 195 DFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLF 254
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG------------VE 158
+ G +P +T++ +I G R G + +L M + E +
Sbjct: 255 KDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIR 314
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
G A F M + NP VVT+ +VI FC + EA+ L + + G PN + +
Sbjct: 315 GRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMY 374
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
N +M+ K ++D+A+ L + M + G+ P+ +N L+ G GR L +
Sbjct: 375 NTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISV 434
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
+G + I ++G C ++ A+ +ML KG+ P ++ +N++ + ++
Sbjct: 435 LGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDK 494
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
AF+ + M G+ T + + GL N + EA EL + ++ A+ L+D
Sbjct: 495 AFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLD 554
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 101/221 (45%)
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D S++R F A +A +L M + GV+P+ ++ L + G +L
Sbjct: 195 DFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLF 254
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
+I+ G +P + ++ ++ GFC G ++ + L M C F+Y+I+IN C
Sbjct: 255 KDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIR 314
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
AL+ + M+ +G P VV +NT+ + V A KLFD ++ G + + Y
Sbjct: 315 GRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMY 374
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
T ++G K I +A L+ +R D +N L+ G
Sbjct: 375 NTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSG 415
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
S P + ++NI ++ + + + L S G+ P+ TYN ++N C +
Sbjct: 717 SNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCS-DILDRAM 775
Query: 73 VVLGRILRSCFTPNAVTFTSLI 94
++ R+L+ F PN VT L+
Sbjct: 776 ILTARLLKMAFVPNVVTANLLL 797
>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
Length = 482
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 187/391 (47%), Gaps = 13/391 (3%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
NI L K+ D S F+ L + +YNILIN FCK R+ + G +
Sbjct: 70 NITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGEMKA 129
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
P+ T+ +LI GLC R+ EA + +L G + TYN L++G +
Sbjct: 130 PGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRVPE 189
Query: 141 ALNLFEEMASGNG------------EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
A+ L E+ + G +G + +A+ F +M+ + + P VT+T +I
Sbjct: 190 AVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLID 249
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
G C AN AK + ++ G P+VV + +MD CK G +DEA R+ +LM G P
Sbjct: 250 GLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTP 309
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
N N L++G C R+++A+E+F + V +YS ++G C+ ++ A +
Sbjct: 310 NDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVL 369
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD-EMQRDGVAADTWTYRTFIDGLCK 367
++ KG PDVV+Y L L + +++ A K+F+ +M+ G A + +T ++G
Sbjct: 370 CMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGL 429
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLID 398
+ EA ELF+ + D R ++ + +
Sbjct: 430 AGRLDEARELFQRFVERGVQPDCRTFSAMAN 460
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 160/325 (49%), Gaps = 13/325 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L G L + + ++RL S+G TYNIL++ FCK RV +
Sbjct: 134 PSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRVPEAVEL 193
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ + + +I L + +I EA F ++ G P T+ LI+GL +
Sbjct: 194 LNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCK 253
Query: 135 TGHTIVALNLFEEMASGNGEFGV-------EGF-----VDKAKELFLQMKDENINPDVVT 182
A +F G V +GF VD+A +F M + P+ V+
Sbjct: 254 ANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVS 313
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+I G C A ++A+ + E++ + +P+VVT++ MD LC+ ++D+A ++L +++
Sbjct: 314 CNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLV 373
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELF-VSMESMGCTHTVFSYSILINGYCKNKEI 301
G P+ +Y L+ G C GR++ A+++F V M + GC F+ ++L+NG+ +
Sbjct: 374 DKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRL 433
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTL 326
+ A L+ + +G++PD ++ +
Sbjct: 434 DEARELFQRFVERGVQPDCRTFSAM 458
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 3/211 (1%)
Query: 190 FCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
C+ +EA L ++ G + ++++ EL K G+ +E +++ LM+
Sbjct: 9 LCHVGKLDEALELFHSLVSDGCG---LPADLLVRELSKAGRAEECLKVVKLMLDRQQLRE 65
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
+ N +D C + +++A+ F ++ SY+ILIN +CK K I+ A+ L+G
Sbjct: 66 RHLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFG 125
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
EM + G P YNTL L + ++ A + ++ + G A TY +DG CK
Sbjct: 126 EMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKAD 185
Query: 370 YIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ EAVEL L + YNC+ID L
Sbjct: 186 RVPEAVELLNELVARGGVVTSAPYNCIIDTL 216
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 91/196 (46%), Gaps = 25/196 (12%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF+ M N +P V S NIL L K K +F+ + PD+ TY+ ++
Sbjct: 298 IFELMTNRGCTPNDV-SCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGL 356
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF-TKLRVFGCEPN 121
C+ RV VL ++ TP+ V +T+LI GLC+ R+ EA +F +R GC PN
Sbjct: 357 CRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPN 416
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
FT N L+NG FG+ G +D+A+ELF + + + PD
Sbjct: 417 NFTCNVLVNG-----------------------FGLAGRLDEARELFQRFVERGVQPDCR 453
Query: 182 TYTSVIRGFCYANDWN 197
T++++ W+
Sbjct: 454 TFSAMANNTAKTEGWD 469
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 109/268 (40%), Gaps = 52/268 (19%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
S P C + LF K K ++ L F R+ G+ P T+ +LI+ CK RV+
Sbjct: 206 SAPYNCIIDTLF---KKGKIHEAEL-FFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAK 261
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+ L S +P+ V + L+ G C + EA +F + GC PN + N LINGL
Sbjct: 262 EIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGL 321
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDV 180
+ A +FEE+ + V + VD+A+++ + D+ PDV
Sbjct: 322 CKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDV 381
Query: 181 VTYTSVIRGFC------------------------------------YANDWNEAKCLLI 204
V YT++I G C A +EA+ L
Sbjct: 382 VMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQ 441
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMD 232
+++GVQP+ TF+ + + K D
Sbjct: 442 RFVERGVQPDCRTFSAMANNTAKTEGWD 469
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 186/386 (48%), Gaps = 29/386 (7%)
Query: 16 PVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVL 75
P S LF L K + ++ + G PD+ +N+L++ CK +++ ++
Sbjct: 189 PFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLF 248
Query: 76 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL---FTKLRVFGCEPNVFTYNTLINGL 132
G I + P V+F +LI G C + + L + RVF P+VFTY+ LINGL
Sbjct: 249 GEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVF---PDVFTYSVLINGL 305
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ EG +D A +LFL+M D + P+ VT+T++I G C
Sbjct: 306 CK-----------------------EGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCV 342
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
+ + +M+ +GV+P+V+T+N +++ LCK G + EA +L+ M Q G++P+ F
Sbjct: 343 TGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFT 402
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
Y L+DG C G + A E+ M G +++ LI+G+C+ ++ A EML
Sbjct: 403 YTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREML 462
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
GIKPD Y + + V+ FKL EMQ DG TY ++GLCK +
Sbjct: 463 EAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMK 522
Query: 373 EAVELFRTLRILKCELDIRAYNCLID 398
A L + L D YN L++
Sbjct: 523 NANMLLDAMLNLGVVPDDITYNILLE 548
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 183/398 (45%), Gaps = 23/398 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F +L R + F++L + ++ + F+ + L ++ L +
Sbjct: 141 VFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRL 200
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K+ S + IL + P+ F L+ LC E +I EA LF ++ G P V
Sbjct: 201 MKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTV 260
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
++NTLING ++G+ +D+ L M + + PDV T
Sbjct: 261 VSFNTLINGYCKSGN-----------------------LDQGFRLKRFMMENRVFPDVFT 297
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+ +I G C ++A L +EM D+G+ PN VTF +++ C G+ D + M+
Sbjct: 298 YSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQML 357
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ GV+P+ YNTL++G C G + AK+L + M G F+Y++LI+G CK ++E
Sbjct: 358 RKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLE 417
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL + EM+ +GI+ D V + L QV A + EM G+ D TY I
Sbjct: 418 SALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVI 477
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G CK + +L + ++ + YN L++GL
Sbjct: 478 HGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGL 515
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 189/400 (47%), Gaps = 34/400 (8%)
Query: 16 PVCSFNILFGCLAKNKHY---DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
P + N L + N H ++LS FK L++ + + + I+ +C M F
Sbjct: 63 PSLTPNHLIDLINLNPHSLSPPSLLSFFKWLSTQ------HHFRLSIHSYCTMTH----F 112
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK-LRVFGCEPNVFTYNTLING 131
+ ++L SL++ + + A+++FT L G + ++ L+N
Sbjct: 113 LCTHKMLSEA--------QSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNA 164
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEG------------FVDKAKELFLQMKDENINPD 179
+G+ A+ F + N + A + ++ D PD
Sbjct: 165 YTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPD 224
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
V + ++ C + NEA+ L E+ +G++P VV+FN +++ CK+G +D+ RL
Sbjct: 225 VCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKR 284
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M++ V P+ F Y+ L++G C G+++ A +LF+ M G +++ LING+C
Sbjct: 285 FMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTG 344
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
+ + +Y +ML KG+KPDV+ YNTL L ++ + A KL EM + G+ D +TY
Sbjct: 345 RADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYT 404
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
IDG CK + A+E+ + + ELD A+ LI G
Sbjct: 405 MLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISG 444
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P ++ +L K ++ L + K + G+ D + LI+ FC+ G+
Sbjct: 391 MTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQ 450
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V L +L + P+ T+T +I G C + + L +++ G P V TYN
Sbjct: 451 VIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNV 510
Query: 128 LINGLYRTGHTIVALNLFEEM 148
L+NGL + G A L + M
Sbjct: 511 LLNGLCKQGQMKNANMLLDAM 531
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 39/81 (48%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ ++ K T L K + G P + TYN+L+N CK G++ + ++
Sbjct: 468 PDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANML 527
Query: 75 LGRILRSCFTPNAVTFTSLIK 95
L +L P+ +T+ L++
Sbjct: 528 LDAMLNLGVVPDDITYNILLE 548
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 165/356 (46%), Gaps = 39/356 (10%)
Query: 26 CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTP 85
CL +D L K + G PD TY+ +I C +V F++ + TP
Sbjct: 431 CLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTP 490
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
+ T+T LI C I +A LF ++R GC P V TY LI+ +
Sbjct: 491 DVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ-------- 542
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA---KCL 202
V +A ++F +M D P+ VTY +++ G C A + ++A
Sbjct: 543 ---------------VPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK 587
Query: 203 LIEMMDQG-------------VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
LI D + PNVVT+ ++D LCK K+D A LLD M+ G PN
Sbjct: 588 LIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPN 647
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
VY+ L+DGFC G+++ A+E+F+ M G +V +Y+ LI+ K+ ++ A+ +
Sbjct: 648 HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 707
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
+ML P+VV Y + L I + E+A KL M+ G + + TY IDGL
Sbjct: 708 QMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 763
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 175/389 (44%), Gaps = 33/389 (8%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
L + ++D +S R+ P++ TY L++ F K ++ ++ ++ PN
Sbjct: 286 LMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPN 345
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
F SL+ C E A L ++ GC P YN I +
Sbjct: 346 PSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSI-------------- 391
Query: 147 EMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
G + +D A++++ +M N + V + R C +++A L+ EM
Sbjct: 392 ---CGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEM 448
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
M +G P+ T++ ++ LC K+++A L M +GV P+ + Y L+D FC G +
Sbjct: 449 MRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLI 508
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+A+ LF M S+GC+ TV +Y+ LI+ Y K K++ A ++ M+ G +P+ V Y L
Sbjct: 509 EQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGAL 568
Query: 327 FVVLFEIHQVERAFKLFDEM----------------QRDGVAADTWTYRTFIDGLCKNSY 370
L + + +AF+++ ++ R +A + TY +DGLCK
Sbjct: 569 VDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHK 628
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ A EL + CE + Y+ LIDG
Sbjct: 629 VDHAHELLDAMLSSGCEPNHIVYDALIDG 657
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 162/435 (37%), Gaps = 96/435 (22%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV----- 74
N+L + ++ L RL G P TYN L+ G+V GF V
Sbjct: 177 LNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMS 236
Query: 75 ---------------------------LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA 107
L I R F + V T +I GL S EA
Sbjct: 237 ESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAM 296
Query: 108 ALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKEL 167
+ ++R C PNV TY TL++G + + K +
Sbjct: 297 SFLHRMRCNSCIPNVVTYRTLLSGFLKKKQ-----------------------LGWCKRI 333
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
M E NP+ + S++ +C D+ A LL M G P V +N+ + +C
Sbjct: 334 INMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICG 393
Query: 228 N-----------------------------------------GKMDEASRLLDLMIQIGV 246
GK D+A +L+ M++ G
Sbjct: 394 QEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGF 453
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+ Y+ ++ C +V +A LF M+ +G T V++Y+ILI+ +CK IE A
Sbjct: 454 VPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQW 513
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L+ EM S G P VV Y L + QV +A +F M G + TY +DGLC
Sbjct: 514 LFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLC 573
Query: 367 KNSYIVEAVELFRTL 381
K I +A E++ L
Sbjct: 574 KAGNISKAFEVYAKL 588
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 149/374 (39%), Gaps = 61/374 (16%)
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
VLGR+L L++ C EA +L+ FG P+ TYN L+ L
Sbjct: 172 VLGRLL-----------NVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLS 220
Query: 134 RTGHTIVALNLFEEMASGN---GEFGVEGFVD------KAKELFLQMKDENINPDVVTYT 184
G + + +EM+ F V F + + ++ E+ D V T
Sbjct: 221 SAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCT 280
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+I G A+ ++EA L M PNVVT+ ++ K ++ R++++M+
Sbjct: 281 HMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTE 340
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG- 303
G PN ++N+L+ +C A +L M + GC Y+I I C +++
Sbjct: 341 GCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSP 400
Query: 304 -----ALSLYGEMLS-----------------------------------KGIKPDVVIY 323
A +YGEML+ KG PD Y
Sbjct: 401 DLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTY 460
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
+ + L +VE+AF LF EM+ GV D +TY ID CK I +A LF +R
Sbjct: 461 SKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRS 520
Query: 384 LKCELDIRAYNCLI 397
+ C + Y LI
Sbjct: 521 VGCSPTVVTYTALI 534
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 96/247 (38%), Gaps = 11/247 (4%)
Query: 155 FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
G +G A+ L ++ +E+ ++R C WNEA L + D G +P+
Sbjct: 149 LGFDGRARDAERLLREIGEEDREVLGRLLNVLVRRCCRGGMWNEALEELGRLKDFGYRPS 208
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF- 273
VT+N ++ L G++D R+ M + G + F C GR A ++
Sbjct: 209 KVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIE 268
Query: 274 ---VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
++++ CTH +I+G + + A+S M P+VV Y TL
Sbjct: 269 REDFKLDTVLCTH-------MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGF 321
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
+ Q+ ++ + M +G + + + + C A +L + C
Sbjct: 322 LKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGY 381
Query: 391 RAYNCLI 397
YN I
Sbjct: 382 VVYNIFI 388
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 182/379 (48%), Gaps = 17/379 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + N L K + L +R+ TG+ PD+ TYN LI +C + R+ +
Sbjct: 268 PSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALEL 327
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE--PNVFTYNTLINGL 132
+ + P+ V++ +++ LC E +I E L K+ V+ P+ TYNTLI+ L
Sbjct: 328 IAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKM-VWNSNLIPDQVTYNTLIHML 386
Query: 133 YRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPD 179
+ GH AL +E A G F +G +D+AK L + M NPD
Sbjct: 387 SKHGHADDALAFLKE-AQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPD 445
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
VVTYT+++ GFC +EAK +L +M G +PN V++ +++ LC +GK EA +++
Sbjct: 446 VVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMIN 505
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
+ + PNA Y +M G G+++ A +L M G T ++LI C+N+
Sbjct: 506 VSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQ 565
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++ A E L+KG +VV + T+ +I +E A + D+M G D TY
Sbjct: 566 KVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYT 625
Query: 360 TFIDGLCKNSYIVEAVELF 378
D L K + EA EL
Sbjct: 626 ALFDALGKKGRLDEAAELI 644
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 179/388 (46%), Gaps = 26/388 (6%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINCFCKMGRVSHGF 72
PP S+ + G L K K + V L +++ ++ L PD TYN LI+ K G
Sbjct: 337 PPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDAL 396
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
L F + V +++++ C + R+ EA +L + GC P+V TY +++G
Sbjct: 397 AFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGF 456
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
R G +D+AK++ QM P+ V+YT+++ G C+
Sbjct: 457 CRLGR-----------------------IDEAKKILQQMYKHGCKPNTVSYTALLNGLCH 493
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
+ EA+ ++ + PN +T+ +M L + GK+ EA L M++ G P
Sbjct: 494 SGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVE 553
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
N L+ C +V AK+ + GC V +++ +I+G+C+ ++E ALS+ +M
Sbjct: 554 INLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMY 613
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
G PD V Y LF L + +++ A +L +M G+ TYR+ I + +
Sbjct: 614 LSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVD 673
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + L ++LK + YN +I+ L
Sbjct: 674 DMLNLLE--KMLKRQPFRTVYNQVIEKL 699
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 183/389 (47%), Gaps = 16/389 (4%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
C+ + M+ P ++N L L+K+ H D L+ K G D Y+ +++
Sbjct: 361 CLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHS 420
Query: 62 FCKMGRVSHG-FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
FC+ GR+ +V+ R C P+ VT+T+++ G C RI EA + ++ GC+P
Sbjct: 421 FCQKGRMDEAKSLVIDMYSRGC-NPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKP 479
Query: 121 NVFTYNTLINGLYRTGHTIVA---LNLFEE-------MASGNGEFGV--EGFVDKAKELF 168
N +Y L+NGL +G ++ A +N+ EE + G G+ EG + +A +L
Sbjct: 480 NTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLT 539
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+M ++ P V +I+ C EAK L E +++G NVV F ++ C+
Sbjct: 540 REMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQI 599
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G M+ A +LD M G P+A Y L D GR++ A EL V M S G T +Y
Sbjct: 600 GDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTY 659
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+I+ Y + ++ L+L +ML + +P +YN + L + +E A KL ++ R
Sbjct: 660 RSVIHRYSQWGRVDDMLNLLEKMLKR--QPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLR 717
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
D T ++ K + A ++
Sbjct: 718 TASKVDANTCHVLMESYLKKGVAISAYKV 746
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 185/438 (42%), Gaps = 49/438 (11%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R S PV + +L L+K K + + + G+ + ++ + + G++ +
Sbjct: 195 RYSHHPVVYYTML-DVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRN 253
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
VL + ++ P+ + I L ++ +A +++V G +P++ TYN+LI
Sbjct: 254 ALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIK 313
Query: 131 GLYRTGHTIVALNLFEEMASGN------GEFGVEGFVDKAKEL----------------- 167
G AL L + S + V GF+ K K++
Sbjct: 314 GYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLI 373
Query: 168 ------------------------FL-QMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
FL + +D+ + D V Y++++ FC +EAK L
Sbjct: 374 PDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSL 433
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
+I+M +G P+VVT+ I+D C+ G++DEA ++L M + G +PN Y L++G C
Sbjct: 434 VIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCH 493
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
+G+ A+E+ E T +Y +++G + ++ A L EM+ KG P V
Sbjct: 494 SGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVE 553
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
N L L + +V A K +E G A + + T I G C+ + A+ + +
Sbjct: 554 INLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMY 613
Query: 383 ILKCELDIRAYNCLIDGL 400
+ D Y L D L
Sbjct: 614 LSGKHPDAVTYTALFDAL 631
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 107/267 (40%), Gaps = 26/267 (9%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P PV N+L L +N+ + + G ++ + +I+ FC++G +
Sbjct: 549 PTPV-EINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALS 607
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
VL + S P+AVT+T+L L + R+ EAA L K+ G +P TY ++I+
Sbjct: 608 VLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYS 667
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ G LNL E+M P Y VI C
Sbjct: 668 QWGRVDDMLNLLEKMLKRQ-------------------------PFRTVYNQVIEKLCDF 702
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+ EA+ LL +++ + + T +V+M+ K G A ++ M + + P+ +
Sbjct: 703 GNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRMFRRNLTPDLKLC 762
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMG 280
+ L G++ A L + G
Sbjct: 763 EKVSKKLVLDGKLVEADNLMLRFVERG 789
>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g31840
gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 840
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 197/430 (45%), Gaps = 47/430 (10%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V F+ K+ T ++KR+ G+ P++ TY ILI C+ GR+ F + G
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+IL+ P+ VT++SLI G C + AL+ + G P+V Y L++GL + G
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 137 HTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYT 184
+ A+ +M + V F D+A ++F M I PDV T+T
Sbjct: 476 LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT 535
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK-------------- 230
+V+R EA L M G++P+ + + ++D CK+ K
Sbjct: 536 TVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN 595
Query: 231 ---------------------MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
+++AS+ + +I+ + P+ YNT++ G+C R++ A
Sbjct: 596 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 655
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
+ +F ++ + +ILI+ CKN +++GA+ ++ M KG KP+ V Y L
Sbjct: 656 ERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDW 715
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
+ +E +FKLF+EMQ G++ +Y IDGLCK + EA +F K D
Sbjct: 716 FSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPD 775
Query: 390 IRAYNCLIDG 399
+ AY LI G
Sbjct: 776 VVAYAILIRG 785
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 172/385 (44%), Gaps = 23/385 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +F L K D LFK + G+ PDL Y+ LI+ + K G + G +
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ L + V F+S I + A+ ++ ++ G PNV TY LI GL +
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G A FG+ G Q+ + P +VTY+S+I GFC
Sbjct: 404 DGRIYEA-------------FGMYG----------QILKRGMEPSIVTYSSLIDGFCKCG 440
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ L +M+ G P+VV + V++D L K G M A R M+ +R N V+N
Sbjct: 441 NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFN 500
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L+DG+C R + A ++F M G V +++ ++ +E AL L+ M
Sbjct: 501 SLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKM 560
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G++PD + Y TL + + +LFD MQR+ ++AD I L K I +A
Sbjct: 561 GLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDA 620
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+ F L K E DI YN +I G
Sbjct: 621 SKFFNNLIEGKMEPDIVTYNTMICG 645
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 178/373 (47%), Gaps = 13/373 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +++ M+ M PP V + +L L+K + ++ + ++ +N LI+
Sbjct: 446 FALYEDMIKM-GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+C++ R V + P+ TFT++++ E R+ EA LF ++ G EP
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEP 564
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASG--NGEFGVEGFV----------DKAKELF 168
+ Y TLI+ + + L LF+ M + + V V + A + F
Sbjct: 565 DALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFF 624
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+ + + PD+VTY ++I G+C +EA+ + + PN VT +++ LCKN
Sbjct: 625 NNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKN 684
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
MD A R+ +M + G +PNA Y LMD F + + + +LF M+ G + ++ SY
Sbjct: 685 NDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSY 744
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
SI+I+G CK ++ A +++ + + + PDVV Y L ++ ++ A L++ M R
Sbjct: 745 SIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLR 804
Query: 349 DGVAADTWTYRTF 361
+GV D R
Sbjct: 805 NGVKPDDLLQRAL 817
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 178/418 (42%), Gaps = 55/418 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ IL L ++ ++ ++ G+ P + TY+ LI+ FCK G + GF +
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ + P+ V + L+ GL + ++ A K+ NV +N+LI+G R
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 135 TGHTIVALNLFEEMASGNGEFGV----------------EGFVDKAKELFLQMKDENINP 178
AL +F M G +G+ EG +++A LF +M + P
Sbjct: 509 LNRFDEALKVFRLM----GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEP 564
Query: 179 DVVTYTSVIRGFCYANDWNEA---------------------------KCLLIE------ 205
D + Y ++I FC KC IE
Sbjct: 565 DALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFF 624
Query: 206 --MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
+++ ++P++VT+N ++ C ++DEA R+ +L+ PN L+ C
Sbjct: 625 NNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKN 684
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
++ A +F M G +Y L++ + K+ +IEG+ L+ EM KGI P +V Y
Sbjct: 685 NDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSY 744
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+ + L + +V+ A +F + + D Y I G CK +VEA L+ +
Sbjct: 745 SIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 802
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 162/354 (45%), Gaps = 12/354 (3%)
Query: 58 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 117
L+ C C+ G V + + + ++ L R+ A F KL G
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGG 211
Query: 118 CEPN-VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV-------EGF----VDKAK 165
EP+ V + +++ L+ G AL+ + G+ +G ++ A
Sbjct: 212 IEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVAS 271
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
L + D P+VVT+ ++I GFC + + A L M +G++P+++ ++ ++D
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGY 331
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
K G + +L + GV+ + V+++ +D + +G + A ++ M G + V
Sbjct: 332 FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNV 391
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
+Y+ILI G C++ I A +YG++L +G++P +V Y++L + + F L+++
Sbjct: 392 VTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYED 451
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
M + G D Y +DGL K ++ A+ + L++ +N LIDG
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 160/364 (43%), Gaps = 66/364 (18%)
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG--- 153
L ES A F + G +P ++ T+ + L R G VA +F+EM + G
Sbjct: 77 LSLESEPNSALKYFRWAEISGKDP---SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDF 133
Query: 154 ----------------EFGVE-----GFVDKAKELFL---------------QMKDENIN 177
+F +E G VDKA E+F+ +M + I
Sbjct: 134 NVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIG 193
Query: 178 PDVVT-----YTSVIRG-----------------FCYANDWNEAKCLLIEMMDQGVQPNV 215
D V + + RG FC + +A +M++G + +
Sbjct: 194 SDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFC-KGEVTKALDFHRLVMERGFRVGI 252
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
V+ N ++ L + +++ ASRLL L++ G PN + TL++GFC G ++RA +LF
Sbjct: 253 VSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
ME G + +YS LI+GY K + L+ + L KG+K DVV++++ V +
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
+ A ++ M G++ + TY I GLC++ I EA ++ + E I Y+
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431
Query: 396 LIDG 399
LIDG
Sbjct: 432 LIDG 435
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 181/381 (47%), Gaps = 7/381 (1%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+N L L V ++ + S G+ PD+ T+NILI CK ++ +V+ +
Sbjct: 161 YNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMS 220
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
P+ TFT+L++G E + A + ++ GC T N L++G + G
Sbjct: 221 SYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIE 280
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
AL+ +EM++ EG A EL+ +MK++ PD TY +I CY EA
Sbjct: 281 EALSFIDEMSN-------EGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEA 333
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
LL EM G NV+T+N ++D CKN K++EA + D M G+ N+ YNTL+DG
Sbjct: 334 LGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDG 393
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
C + RV A +L M G F+Y+ ++ +C+ +I+ A + M S G +PD
Sbjct: 394 LCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPD 453
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
+V Y TL L + +VE A +L +Q G+ Y I L K EA+ LFR
Sbjct: 454 IVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFR 513
Query: 380 TLRILKCELDIRAYNCLIDGL 400
+ D Y + GL
Sbjct: 514 EMEEKGNTPDAFTYKIVFRGL 534
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 183/380 (48%), Gaps = 42/380 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FNIL L K + + + ++S GL PD T+ L+ F + G + F V
Sbjct: 191 PDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRV 250
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA----------------LFTKLRVFGC 118
++L + VT L+ G C E RI EA + L+ +++ GC
Sbjct: 251 KEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGC 310
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMA-SGNGEFGVEGFVDKAKELFLQMKDENIN 177
+P+ FTYN LI+ L G AL L EM SG
Sbjct: 311 QPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCAR----------------------- 347
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
+V+TY ++I GFC EA+ + +M QG+ N VT+N ++D LCK+ ++ EA++L
Sbjct: 348 -NVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQL 406
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
+D MI G++P+ F YN+++ FC G + +A ++ +M S GC + +Y LI G CK
Sbjct: 407 MDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCK 466
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+E A L + KG+ YN + LF+ + + A +LF EM+ G D +T
Sbjct: 467 AGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFT 526
Query: 358 YRTFIDGLCKN-SYIVEAVE 376
Y+ GL + I EAV+
Sbjct: 527 YKIVFRGLSNSGGPIGEAVD 546
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 124/283 (43%), Gaps = 24/283 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N+L L L L + + +G ++ TYN LI+ FCK ++ +
Sbjct: 312 PDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEI 371
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ + N+VT+ +LI GLC R+ EAA L ++ + G +P+ FTYN+++ R
Sbjct: 372 FDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCR 431
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
EG + KA ++ M PD+VTY ++I G C A
Sbjct: 432 -----------------------EGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAG 468
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
A LL + +G+ +N ++ L K + EA RL M + G P+AF Y
Sbjct: 469 RVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYK 528
Query: 255 TLMDGFCLT-GRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+ G + G + A + + M G S+ +L G C
Sbjct: 529 IVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLC 571
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 13/240 (5%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++N L KNK + +F ++ GL + TYN LI+ CK RV ++
Sbjct: 349 VITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMD 408
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+++ P+ T+ S++ C E I +AA + + GCEP++ TY TLI GL + G
Sbjct: 409 QMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAG 468
Query: 137 HTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYT 184
VA L + + +A LF +M+++ PD TY
Sbjct: 469 RVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYK 528
Query: 185 SVIRGFCYA-NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
V RG + EA +IEM+++G P +F ++ + LC D +L+DL+++
Sbjct: 529 IVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCSLSMEDTLIKLVDLVME 588
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 109/280 (38%), Gaps = 52/280 (18%)
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
K N P+ Y ++R +N K +L EM Q + + +D K
Sbjct: 79 KQPNFRPNSSIYEEILRKLGKVGSFNSMKDILQEMKGLDCQIDRGVLLIFIDSYAKFELY 138
Query: 232 DEASRLLDLM-IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+E ++++M ++ G+ + +YN L++ ++ + + +M S G V +++I
Sbjct: 139 EEILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNI 198
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK--------- 341
LI CK +I A+ + EM S G+ PD + TL E ++ AF+
Sbjct: 199 LIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAG 258
Query: 342 ------------------------------------------LFDEMQRDGVAADTWTYR 359
L++EM+ G D +TY
Sbjct: 259 CPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYN 318
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
ID LC + EA+ L R + I C ++ YN LIDG
Sbjct: 319 MLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDG 358
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 202/409 (49%), Gaps = 13/409 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINC 61
+FD M R P V +NIL K +++RL ++P++ +YN++IN
Sbjct: 206 LFDEMPE-RGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMING 264
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK G+ F + R+ ++ + T+++LI GLC + A ++ ++ G P+
Sbjct: 265 LCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPD 324
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE-----------GFVDKAKELFLQ 170
V YNT++NG R G L L++ M V VD+A ++
Sbjct: 325 VVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWEL 384
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ +++ D +TY ++ G C N+A +L E + + ++ +++ LC+ G+
Sbjct: 385 LPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGR 444
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+DE + +LD M + G +PN V N +++GF ++ A F +M S GC TV +Y+
Sbjct: 445 LDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNT 504
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LING K + A +L EML KG KP+++ Y+ L L + +++ A L+ + G
Sbjct: 505 LINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG 564
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
D + I GLC + + +A++L+ ++ KC ++ +N L++G
Sbjct: 565 FKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEG 613
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 182/377 (48%), Gaps = 13/377 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
I++ +L P + S+N++ L K +D ++ R+ DLYTY+ LI+
Sbjct: 241 IWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGL 300
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C G + V + + +P+ V + +++ G RI E L+ + GC V
Sbjct: 301 CGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TV 359
Query: 123 FTYNTLINGLYRTGHTIVALNLFE-----EMASGNGEFGV-------EGFVDKAKELFLQ 170
+YN LI GL+ A++++E + + + +GV G+++KA + +
Sbjct: 360 VSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEE 419
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
++ + D Y+S+I G C +E +L +M G +PN N +++ + K
Sbjct: 420 AENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASK 479
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+++A R M+ G P YNTL++G R + A L M G + +YS+
Sbjct: 480 LEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSL 539
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L+NG C+ K+++ AL+L+ + L KG KPDV ++N + L +VE A +L+ EM++
Sbjct: 540 LMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRK 599
Query: 351 VAADTWTYRTFIDGLCK 367
+ T+ T ++G K
Sbjct: 600 CVPNLVTHNTLMEGFYK 616
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/480 (25%), Positives = 204/480 (42%), Gaps = 82/480 (17%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF M + P + S+N L L ++ +D S F + GL P+L TYNILI
Sbjct: 100 IFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKIS 159
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ + +L + F+P+ ++ +LI L + +A LF ++ G P+V
Sbjct: 160 CRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDV 219
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNG------EFGVE-------GFVDKAKELFL 169
YN LI+G ++ G + A ++E + G + V G D++ E++
Sbjct: 220 ACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWH 279
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD------ 223
+MK D+ TY+++I G C + + + A + EM + GV P+VV +N +++
Sbjct: 280 RMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAG 339
Query: 224 ------ELCK----------------------NGKMDEASRLLDLMIQIGVRPNAFVYNT 255
EL K N K+DEA + +L+ + ++ Y
Sbjct: 340 RIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGV 399
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN----------------- 298
L+ G C G +N+A + E+ F+YS +ING C+
Sbjct: 400 LVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHG 459
Query: 299 ------------------KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
++E AL +G M+SKG P VV YNTL L + + A+
Sbjct: 460 CKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAY 519
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
L EM G + TY ++GLC+ + A+ L+ + D++ +N +I GL
Sbjct: 520 ALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGL 579
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 173/348 (49%), Gaps = 13/348 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+++ L L + + D ++K + G+ PD+ YN ++N + + GR+ + L ++
Sbjct: 292 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEE-CLELWKV 350
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ V++ LI+GL +++ EA +++ L C + TY L++GL + G+
Sbjct: 351 MEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYL 410
Query: 139 IVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSV 186
AL++ EE +G G+ EG +D+ + QM P+ +V
Sbjct: 411 NKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAV 470
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I GF A+ +A M+ +G P VVT+N +++ L K + EA L+ M+ G
Sbjct: 471 INGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGW 530
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+PN Y+ LM+G C +++ A L+ G V ++I+I+G C + ++E AL
Sbjct: 531 KPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQ 590
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
LY EM + P++V +NTL +++ ERA K++D + + +++
Sbjct: 591 LYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQSWSSSN 638
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 147/297 (49%), Gaps = 23/297 (7%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V S+NIL L +N D +S+++ L D TY +L++ CK G ++ +L
Sbjct: 359 VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILE 418
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ ++S+I GLC E R+ E A + ++ GC+PN N +ING R
Sbjct: 419 EAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRAS 478
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
AL F M S G F P VVTY ++I G A +
Sbjct: 479 KLEDALRFFGNMVS-KGCF----------------------PTVVTYNTLINGLSKAERF 515
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+EA L+ EM+ +G +PN++T++++M+ LC+ K+D A L ++ G +P+ ++N +
Sbjct: 516 SEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNII 575
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
+ G C +G+V A +L+ M+ C + +++ L+ G+ K ++ E A ++ +L
Sbjct: 576 IHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQ 632
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 126/240 (52%), Gaps = 2/240 (0%)
Query: 162 DKAKELFLQMKDE-NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
D+A ++F +M + P + +Y S++ +N W+EA+ + G+ PN+ T+N+
Sbjct: 95 DQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNI 154
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
++ C+ + D+A LL+ M + G P+ F Y TL++ G ++ A +LF M G
Sbjct: 155 LIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERG 214
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLS-KGIKPDVVIYNTLFVVLFEIHQVERA 339
T V Y+ILI+G+ K +I A ++ +L + P++ YN + L + + + +
Sbjct: 215 VTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDES 274
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
F+++ M+++ D +TY T I GLC + + A +++ + D+ YN +++G
Sbjct: 275 FEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNG 334
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 12/245 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ +L L KN + + LS+ + + D + Y+ +IN C+ GR+ VL ++
Sbjct: 396 TYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQM 455
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ PN ++I G S++ +A F + GC P V TYNTLINGL +
Sbjct: 456 TKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERF 515
Query: 139 IVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSV 186
A L +EM + + + +D A L+ Q ++ PDV + +
Sbjct: 516 SEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNII 575
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G C + +A L EM + PN+VT N +M+ K + AS++ D ++Q
Sbjct: 576 IHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQSWS 635
Query: 247 RPNAF 251
N +
Sbjct: 636 SSNCY 640
>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
Length = 770
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 113/394 (28%), Positives = 184/394 (46%), Gaps = 20/394 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M + P V ++ ++ L + D + L +G+ P + TYN+L++
Sbjct: 202 VFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDAL 261
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ GRV F + GR++ P+ VTF LI GL R E A+ ++ FG PN
Sbjct: 262 CRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNE 321
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
YN LI R GH AL LF+EM S + V EG ++ A+++ +
Sbjct: 322 VIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDE 381
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI-EMMDQGVQPNVVTFNVIMDELCKNG 229
M + + SV+ + LI EM+ + ++PN + ELCK G
Sbjct: 382 MLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRG 441
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K +EA+ + L++ G+ N N L+ G C + A ++ +M G +Y+
Sbjct: 442 KHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYN 501
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
I+I CK ++E A+ L +M+ +G KPD+ +NT + +VE L D+M+ +
Sbjct: 502 IMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSE 561
Query: 350 GVAADTWTYRTFIDGLCK-------NSYIVEAVE 376
G+ D TY T IDG CK N Y++E ++
Sbjct: 562 GLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIK 595
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 185/440 (42%), Gaps = 83/440 (18%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+N L G + H L LF + S G+ + TYN++ CK G + H +L +L
Sbjct: 324 YNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEML 383
Query: 80 RSCFT------------------------------------PNAVTFTSLIKGLCAESRI 103
+ T PN T+ I+ LC +
Sbjct: 384 LAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKH 443
Query: 104 MEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEF-------- 155
EAA ++ + G N+ T N LI+GL + + A + + M EF
Sbjct: 444 EEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIM 503
Query: 156 -----------------------GVE----------------GFVDKAKELFLQMKDENI 176
G + G V+ L QMK E +
Sbjct: 504 IQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGL 563
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
PD+VTY ++I G+C A D ++A LIE++ G++PN V +N ++ +NG + +A
Sbjct: 564 KPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIG 623
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+LD M G++P YN+LM C G V AKE+F V Y+I+I G+C
Sbjct: 624 VLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFC 683
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K +I+ A+ + EM + I+P+ + Y TL + E AFKLFDEM G+ DT
Sbjct: 684 KIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTV 743
Query: 357 TYRTFIDGLCKNSYIVEAVE 376
+Y T I G C+ + + VE
Sbjct: 744 SYNTLISGCCEVDSLDKIVE 763
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 125/242 (51%), Gaps = 24/242 (9%)
Query: 106 AAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAK 165
AA F +L G P++ T N L+ L G G +D A+
Sbjct: 164 AADAFLELSTRGASPSIKTCNILVEAL-----------------------GCGGQLDLAR 200
Query: 166 ELFLQMKDEN-INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
++F +M+D N + PDV TYT +I+ C A + + A +L E+ G+QP VVT+NV+MD
Sbjct: 201 KVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDA 260
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
LC++G+++EA +L M++ +RP+ + L++G R + ME G T
Sbjct: 261 LCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPN 320
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
Y+ LI +C+ AL L+ EM+SKGIK VV YN + L + ++E A ++ D
Sbjct: 321 EVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILD 380
Query: 345 EM 346
EM
Sbjct: 381 EM 382
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 128/295 (43%), Gaps = 23/295 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++NI+ K + + L + G PDL+T+N + +C +G+V +L ++
Sbjct: 499 TYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQM 558
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
P+ VT+ ++I G C + +A +L G PN YN LI G R G
Sbjct: 559 KSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSI 618
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
A+ + + MK I P +TY S++ C+A E
Sbjct: 619 SDAIGVLD-----------------------TMKHNGIQPTPITYNSLMYWMCHAGLVEE 655
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
AK + + + + ++ V+ + +I+ CK GK+DEA M +RPN Y TLM
Sbjct: 656 AKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMY 715
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
+C G A +LF M S G SY+ LI+G C+ ++ + EM S
Sbjct: 716 AYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEMSS 770
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML-SKGIKPDVVI 322
G ++ A + F+ + + G + ++ + +IL+ +++ A ++GEM + PDV
Sbjct: 159 GSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYT 218
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
Y + L +++ AF + E++R G+ TY +D LC++ + EA +L +
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMV 278
Query: 383 ILKCELDIRAYNCLIDGL 400
+ I + LI+GL
Sbjct: 279 EGRLRPSIVTFGILINGL 296
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 192/436 (44%), Gaps = 44/436 (10%)
Query: 9 NMRPS--PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
NMR + P V ++N+L L +N D + ++ G PD ++ +++ CK+G
Sbjct: 94 NMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLG 153
Query: 67 RVSHG------------------------------FVVLGRILRSCFTPNAVTFTSLIKG 96
RV F V+ +++ PN VT+T+++
Sbjct: 154 RVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDA 213
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM-----ASG 151
C + A A+ ++ GC PNV T+ L+ G + G AL+++ M A
Sbjct: 214 FCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPS 273
Query: 152 NGEFGVE-------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
+ V G + A + F MK + P+ TY++++ GF A D + A +
Sbjct: 274 TISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWN 333
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
EM G +PNVV + ++D LCK D+A L+D M+ PN +NTL+ C G
Sbjct: 334 EMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCG 393
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
RV RA +F M GC +Y+ L++G + + A ++ EML+ G + +V YN
Sbjct: 394 RVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYN 453
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
T+ L ++ + A L M G+ D +T+ I CK + A L + +
Sbjct: 454 TVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAV 513
Query: 385 KCELDIRAYNCLIDGL 400
C ++ AY LI L
Sbjct: 514 NCPRNVVAYTILISEL 529
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 183/389 (47%), Gaps = 34/389 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N L L + V+ ++ + G+ P++YTYN+LI C+ RV +
Sbjct: 67 PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 126
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + R P+ V+ +++ G+C R+ EA + P +YN +++ L
Sbjct: 127 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAET-----VPVQASYNAVVHALC- 180
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL---QMKDENINPDVVTYTSVIRGFC 191
GEF + E+F +M + P+VVTYT+++ FC
Sbjct: 181 ------------------GEF-------RMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFC 215
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
A + A +L M+ G PNV+TF ++ ++GK+ +A + M+ G P+
Sbjct: 216 KARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTI 275
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
YN L+ G C G + A + F SM+ +YS L++G+ +++GA+ ++ EM
Sbjct: 276 SYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEM 335
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
S G KP+VV+Y + VL + ++A L D+M D +T T+ T I LC +
Sbjct: 336 KSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRV 395
Query: 372 VEAVELFRTLRILKCELDIRAYNCLIDGL 400
A+ +F +R C + R YN L+ GL
Sbjct: 396 GRALNVFHGMRRNGCHPNDRTYNELLHGL 424
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 169/373 (45%), Gaps = 12/373 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S+N + L V S+ + GL P++ TY +++ FCK + +
Sbjct: 167 PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAI 226
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R++ TPN +TFT+L+KG + ++ +A +++ + G P+ +YN LI GL
Sbjct: 227 LARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCC 286
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G AL+ F M F G +D A ++ +MK P+VV
Sbjct: 287 IGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVV 346
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT++I C +++A+ L+ +M+ PN VTFN ++ LC G++ A + M
Sbjct: 347 YTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMR 406
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G PN YN L+ G G A + + M + G ++ +Y+ +IN C+ +
Sbjct: 407 RNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRK 466
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ L G M+ +GI+PD +N + + +V A L +M + Y I
Sbjct: 467 HAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILI 526
Query: 363 DGLCKNSYIVEAV 375
LC + A+
Sbjct: 527 SELCNQGKLSNAM 539
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 158/329 (48%), Gaps = 12/329 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +F L ++ LS++ + G P +YN+LI C +G +
Sbjct: 237 PNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDF 296
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R+ PNA T+++L+ G + A ++ +++ GC+PNV Y +I+ L +
Sbjct: 297 FNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCK 356
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
A +L ++M N G G V +A +F M+ +P+ T
Sbjct: 357 KMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRT 416
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++ G + +A ++IEM++ G + ++VT+N +++ LC+ A LL M+
Sbjct: 417 YNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMM 476
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G++P+AF +N ++ +C G+V+ A L M ++ C V +Y+ILI+ C ++
Sbjct: 477 VQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLS 536
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
A+ +ML +GI P+ +N L +F
Sbjct: 537 NAMVYLLKMLYEGICPNEATWNVLVRAIF 565
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 98/226 (43%), Gaps = 24/226 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D ML M PP +FN L G L L++F + G P+ TYN L++
Sbjct: 366 LIDKML-MDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGL 424
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
+ G F ++ +L + F + VT+ ++I LC A L ++ V G +P+
Sbjct: 425 FREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDA 484
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
FT+N +I+ + EG V A L QM N +VV
Sbjct: 485 FTFNAIIHAYCK-----------------------EGKVSIAACLLGQMNAVNCPRNVVA 521
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
YT +I C + A L++M+ +G+ PN T+NV++ + N
Sbjct: 522 YTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTN 567
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 202/409 (49%), Gaps = 16/409 (3%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
C+F+ M + P V ++N L + L+LF R+ G+ P + TYN L+
Sbjct: 388 CLFEEMAD--SGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMG 445
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
+CK G + + + F PN VT+ +L++G A+ A AL +++ G N
Sbjct: 446 YCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCN 505
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEE-MASG------------NGEFGVEGFVDKAKELF 168
+TYN LING+ + + M+ G NG F G + A ++
Sbjct: 506 DYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIING-FVKAGMMGSAFTVY 564
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
QM+++ + P+++TYTS I G+C + A +L ++ +G+QP++V +N +++ C+
Sbjct: 565 QQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQE 624
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G M A +LL ++++ G+ PN VYN+L+ G+ + + + SM G +Y
Sbjct: 625 GNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTY 684
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ LI+G+ K+ + AL LY EM++KG PD + L L ++ A KL +EM+R
Sbjct: 685 TTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRR 744
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
V + + Y I+G ++ + EA L + + + D Y+ L+
Sbjct: 745 LDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILV 793
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 186/386 (48%), Gaps = 24/386 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ L ++ + + LF+ + +GL PD++TYN LI+ C+ ++ +
Sbjct: 365 PSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNL 423
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R+ ++ P+ T+ SL+ G C + + EA L++++ + G +PNV TY TL+ G
Sbjct: 424 FDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGY-- 481
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+A F D A L +MK ++ + TY +I G C +
Sbjct: 482 -----IAKKDF----------------DNAYALLDEMKQNGVSCNDYTYNVLINGICMVD 520
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
E +L M +G P ++T+N I++ K G M A + M + G+ PN Y
Sbjct: 521 RVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYT 580
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+ +DG+C TG + A ++ + G + +Y+ LING+C+ + AL L +L
Sbjct: 581 SFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKD 640
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+ P+ V+YN+L ++ ++ K ++ M + G+ ADT TY T IDG K+ + A
Sbjct: 641 GLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFA 700
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+EL+ + D + L GL
Sbjct: 701 LELYSEMMAKGYIPDAFTFTALTHGL 726
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 186/425 (43%), Gaps = 49/425 (11%)
Query: 22 ILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRS 81
++ CL + H D V LF + + PD Y + I CK+G +L +
Sbjct: 198 LMSACLKEGMHEDAV-RLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEV 256
Query: 82 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVA 141
F T+ +++ L R+ EA + ++R G + +V TL+ G A
Sbjct: 257 GFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNA 316
Query: 142 LNLFEE-----MASGNGEFGV-------EGFVDKAKELFLQMKDENINPDVVTYTSVIRG 189
LNLF+E + +GV G KA EL QM + + P + V++G
Sbjct: 317 LNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKG 376
Query: 190 FCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
W +A CL EM D G+ P+V T+N ++ C+ K+ EA L D M + GV+P+
Sbjct: 377 LLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPS 435
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
YN+L+ G+C G ++ A +L+ M G V +Y L+ GY K+ + A +L
Sbjct: 436 INTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLD 495
Query: 310 EM-----------------------------------LSKGIKPDVVIYNTLFVVLFEIH 334
EM +S+G P ++ YN++ +
Sbjct: 496 EMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAG 555
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
+ AF ++ +M+ G+ + TY +FIDG C+ A+++ +R + DI AYN
Sbjct: 556 MMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYN 615
Query: 395 CLIDG 399
LI+G
Sbjct: 616 ALING 620
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 169/392 (43%), Gaps = 11/392 (2%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ + L K + L + + G D+ L+ +C V + +
Sbjct: 264 TYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKET 323
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
L+ P V + LI+G +A L ++ G P+ F + ++ GL
Sbjct: 324 LKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRW 383
Query: 139 IVALNLFEEMASG--------NGEFGVEGFVDKAKE---LFLQMKDENINPDVVTYTSVI 187
A+ LFEEMA N K +E LF +MK + P + TY S++
Sbjct: 384 KDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLL 443
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
G+C +EA L EM +G +PNVVT+ +M D A LLD M Q GV
Sbjct: 444 MGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVS 503
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
N + YN L++G C+ RV + S S G T+ +Y+ +ING+ K + A ++
Sbjct: 504 CNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTV 563
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
Y +M KG+ P+++ Y + + A K+ ++++R G+ D Y I+G C+
Sbjct: 564 YQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQ 623
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ A++L L + YN LI G
Sbjct: 624 EGNMSHALQLLVILLKDGLAPNTVVYNSLITG 655
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 135/287 (47%), Gaps = 12/287 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N+L + V + K S G P + TYN +IN F K G + F V ++
Sbjct: 508 TYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQM 567
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PN +T+TS I G C A + +R G +P++ YN LING + G+
Sbjct: 568 REKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNM 627
Query: 139 IVALNLF-----EEMASGNGEFG--VEGF-----VDKAKELFLQMKDENINPDVVTYTSV 186
AL L + +A + + G+ + + + + M I D TYT++
Sbjct: 628 SHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTL 687
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I GF + A L EMM +G P+ TF + LC++G +D A +LL+ M ++ V
Sbjct: 688 IDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDV 747
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
RPN F+YN L++G+ ++ A L M +MG +Y IL++
Sbjct: 748 RPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVS 794
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 144/350 (41%), Gaps = 59/350 (16%)
Query: 85 PNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNL 144
P+ + T L+ S +A ALF ++R G + + ++ L++ + G A+ L
Sbjct: 155 PDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRL 214
Query: 145 FEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
F+EM G E I+PD Y I C D A +L
Sbjct: 215 FDEMP------GAE-----------------IDPDQRVYALAITALCKLGDGGRALRMLR 251
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL-- 262
EM + G T+ ++D L K G+M+EA R+ D M G + + V TLM G+CL
Sbjct: 252 EMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQ 311
Query: 263 ---------------------------------TGRVNRAKELFVSMESMGCTHTVFSYS 289
G +A EL M G + F S
Sbjct: 312 EVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELS 371
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
+++ G ++ + A+ L+ EM G+ PDV YN L + H++ A LFD M++
Sbjct: 372 LVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKA 430
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
GV TY + + G CK + EAV+L+ + + + ++ Y L+ G
Sbjct: 431 GVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRG 480
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 105/223 (47%), Gaps = 12/223 (5%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + ++ + D L + + GL PD+ YN LIN FC+ G +SH
Sbjct: 573 PPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQ 632
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L +L+ PN V + SLI G + + E + + + G + TY TLI+G
Sbjct: 633 LLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFS 692
Query: 134 RTGHTIVALNLFEEM-ASG-----------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
+ G+ AL L+ EM A G G +D AK+L +M+ ++ P+V
Sbjct: 693 KDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVF 752
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
Y +I G+ EA L EM++ G+QP+ T+++++ +
Sbjct: 753 IYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSK 795
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 93/218 (42%)
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
A + + M + PD+ + T ++ + +A L +EM +G + + F+ +M
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMS 200
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
K G ++A RL D M + P+ VY + C G RA + M+ +G
Sbjct: 201 ACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDT 260
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
F+Y +++ K +E AL + EM G K DV++ TL +V A LF
Sbjct: 261 CDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLF 320
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
E +DG+ Y I G + +A EL R +
Sbjct: 321 KETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQM 358
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%)
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
A + + M + G + S + L+ + + AL+L+ EM +G + D +++ L
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMS 200
Query: 329 VLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
+ E A +LFDEM + D Y I LCK A+ + R ++
Sbjct: 201 ACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMK 254
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 123/467 (26%), Positives = 202/467 (43%), Gaps = 84/467 (17%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V + NI+ L K+ + V + + G++PD+ TYN LI+ + G + F ++
Sbjct: 225 VYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMH 284
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ F+P T+ ++I GLC + A +F ++ G P+ TY +L+ + G
Sbjct: 285 AMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 344
Query: 137 HTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
+ N+F +M S + F G +DKA F +K+ + PD V YT
Sbjct: 345 DAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 404
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+I+G+C +EA L EM+ QG +VVT+N I+ LCK + EA +L + M +
Sbjct: 405 ILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 464
Query: 245 GVRPNAF-----------------------------------VYNTLMDGFCLTGRVNRA 269
G+ P+++ YNTL+DGF G ++ A
Sbjct: 465 GLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTA 524
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI------- 322
KE++ M S T S+SIL+N C + A ++ EM+SK IKP V+I
Sbjct: 525 KEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKG 584
Query: 323 ----------------------------YNTLFVVLFEIHQVERAFKLFDEMQ--RDGVA 352
YNTL + + +AF L +M+ + G+
Sbjct: 585 YCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLV 644
Query: 353 ADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
D +TY + + G C+ + + EA + R + D Y LI+G
Sbjct: 645 PDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLING 691
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 178/380 (46%), Gaps = 23/380 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F++L + + F L S G + N LI ++G V + + I
Sbjct: 158 FDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEIS 217
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
RS N T ++ LC + ++ + ++++ G P++ TYNTLI+
Sbjct: 218 RSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISA-------- 269
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
+ +G +++A EL M + +P V TY +VI G C + A
Sbjct: 270 ---------------YSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERA 314
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
K + EM+ G+ P+ T+ ++ E CK G E + M V P+ ++++M
Sbjct: 315 KEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSL 374
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
F +G +++A F S++ G Y+ILI GYC+ I A++L EML +G D
Sbjct: 375 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMD 434
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
VV YNT+ L + + A KLF+EM G+ D++T IDG CK + A+ELF+
Sbjct: 435 VVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFK 494
Query: 380 TLRILKCELDIRAYNCLIDG 399
++ + +LD+ YN L+DG
Sbjct: 495 KMKEKRIKLDVVTYNTLLDG 514
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 177/374 (47%), Gaps = 26/374 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF M + P VC F+ + ++ + D L F + GL PD Y ILI +
Sbjct: 352 IFSDMRSRDVVPDLVC-FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 410
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ G +S + +L+ + VT+ +++ GLC + EA LF ++ G P+
Sbjct: 411 CRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDS 470
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+T LI+G + G+ + A ELF +MK++ I DVVT
Sbjct: 471 YTLTILIDGHCKLGN-----------------------LQNAMELFKKMKEKRIKLDVVT 507
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++ GF D + AK + +M+ + + P ++F+++++ LC G + EA R+ D MI
Sbjct: 508 YNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMI 567
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
++P + N+++ G+C +G + + M S G SY+ LI G+ K + +
Sbjct: 568 SKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMS 627
Query: 303 GALSLYGEMLSK--GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
A L +M K G+ PDV YN++ +Q++ A + +M GV D TY +
Sbjct: 628 KAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTS 687
Query: 361 FIDGLCKNSYIVEA 374
I+G + EA
Sbjct: 688 LINGFVSQDNLTEA 701
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 140/315 (44%), Gaps = 23/315 (7%)
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
N F LI+ ++ EA FT LR G ++ N LI L R G +A ++
Sbjct: 154 NDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIY 213
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
+E++ + +V T ++ C + L E
Sbjct: 214 QEISRSG-----------------------VGVNVYTLNIMVNALCKDGKMEKVGTFLSE 250
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
+ ++GV P++VT+N ++ G M+EA L+ M G P + YNT+++G C G+
Sbjct: 251 VQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGK 310
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
RAKE+F M G + +Y L+ CK + +++ +M S+ + PD+V +++
Sbjct: 311 YERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSS 370
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
+ + +++A F+ ++ G+ D Y I G C+ I EA+ L +
Sbjct: 371 MMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQG 430
Query: 386 CELDIRAYNCLIDGL 400
C +D+ YN ++ GL
Sbjct: 431 CAMDVVTYNTILHGL 445
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 21/233 (9%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++N L K DT ++ + S + P +++IL+N C G +S F V
Sbjct: 505 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWD 564
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ P + S+IKG C + K+ G P+ +YNTLI G +
Sbjct: 565 EMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEE 624
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+ A L ++M G G V PDV TY S++ GFC N
Sbjct: 625 NMSKAFGLVKKMEEKQG-----GLV----------------PDVFTYNSILHGFCRENQM 663
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
EA+ +L +M+++GV P+ T+ +++ + EA R D M+Q G P+
Sbjct: 664 KEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 192/436 (44%), Gaps = 44/436 (10%)
Query: 9 NMRPS--PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
NMR + P V ++N+L L +N D + ++ G PD ++ +++ CK+G
Sbjct: 147 NMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLG 206
Query: 67 RVSHG------------------------------FVVLGRILRSCFTPNAVTFTSLIKG 96
RV F V+ +++ PN VT+T+++
Sbjct: 207 RVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDA 266
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM-----ASG 151
C + A A+ ++ GC PNV T+ L+ G + G AL+++ M A
Sbjct: 267 FCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPS 326
Query: 152 NGEFGVE-------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
+ V G + A + F MK + P+ TY++++ GF A D + A +
Sbjct: 327 TISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWN 386
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
EM G +PNVV + ++D LCK D+A L+D M+ PN +NTL+ C G
Sbjct: 387 EMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCG 446
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
RV RA +F M GC +Y+ L++G + + A ++ EML+ G + +V YN
Sbjct: 447 RVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYN 506
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
T+ L ++ + A L M G+ D +T+ I CK + A L + +
Sbjct: 507 TVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAV 566
Query: 385 KCELDIRAYNCLIDGL 400
C ++ AY LI L
Sbjct: 567 NCPRNVVAYTILISEL 582
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 183/389 (47%), Gaps = 34/389 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N L L + V+ ++ + G+ P++YTYN+LI C+ RV +
Sbjct: 120 PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 179
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + R P+ V+ +++ G+C R+ EA + P +YN +++ L
Sbjct: 180 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAET-----VPVQASYNAVVHALC- 233
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL---QMKDENINPDVVTYTSVIRGFC 191
GEF + E+F +M + P+VVTYT+++ FC
Sbjct: 234 ------------------GEF-------RMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFC 268
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
A + A +L M+ G PNV+TF ++ ++GK+ +A + M+ G P+
Sbjct: 269 KARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTI 328
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
YN L+ G C G + A + F SM+ +YS L++G+ +++GA+ ++ EM
Sbjct: 329 SYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEM 388
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
S G KP+VV+Y + VL + ++A L D+M D +T T+ T I LC +
Sbjct: 389 KSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRV 448
Query: 372 VEAVELFRTLRILKCELDIRAYNCLIDGL 400
A+ +F +R C + R YN L+ GL
Sbjct: 449 GRALNVFHGMRRNGCHPNDRTYNELLHGL 477
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 169/373 (45%), Gaps = 12/373 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S+N + L V S+ + GL P++ TY +++ FCK + +
Sbjct: 220 PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAI 279
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R++ TPN +TFT+L+KG + ++ +A +++ + G P+ +YN LI GL
Sbjct: 280 LARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCC 339
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G AL+ F M F G +D A ++ +MK P+VV
Sbjct: 340 IGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVV 399
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT++I C +++A+ L+ +M+ PN VTFN ++ LC G++ A + M
Sbjct: 400 YTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMR 459
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G PN YN L+ G G A + + M + G ++ +Y+ +IN C+ +
Sbjct: 460 RNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRK 519
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ L G M+ +GI+PD +N + + +V A L +M + Y I
Sbjct: 520 HAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILI 579
Query: 363 DGLCKNSYIVEAV 375
LC + A+
Sbjct: 580 SELCNQGKLSNAM 592
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 158/329 (48%), Gaps = 12/329 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +F L ++ LS++ + G P +YN+LI C +G +
Sbjct: 290 PNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDF 349
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R+ PNA T+++L+ G + A ++ +++ GC+PNV Y +I+ L +
Sbjct: 350 FNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCK 409
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
A +L ++M N G G V +A +F M+ +P+ T
Sbjct: 410 KMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRT 469
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++ G + +A ++IEM++ G + ++VT+N +++ LC+ A LL M+
Sbjct: 470 YNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMM 529
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G++P+AF +N ++ +C G+V+ A L M ++ C V +Y+ILI+ C ++
Sbjct: 530 VQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLS 589
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
A+ +ML +GI P+ +N L +F
Sbjct: 590 NAMVYLLKMLYEGICPNEATWNVLVRAIF 618
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 98/226 (43%), Gaps = 24/226 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D ML M PP +FN L G L L++F + G P+ TYN L++
Sbjct: 419 LIDKML-MDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGL 477
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
+ G F ++ +L + F + VT+ ++I LC A L ++ V G +P+
Sbjct: 478 FREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDA 537
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
FT+N +I+ + EG V A L QM N +VV
Sbjct: 538 FTFNAIIHAYCK-----------------------EGKVSIAACLLGQMNAVNCPRNVVA 574
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
YT +I C + A L++M+ +G+ PN T+NV++ + N
Sbjct: 575 YTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTN 620
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 186/382 (48%), Gaps = 24/382 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ M R P V ++ L + N+ D+V + + G PD+ T+ IL++
Sbjct: 315 VFEKMKTGRHKPDRV-TYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDAL 373
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G F L + PN T+ +LI GL R+ +A LF + G +P
Sbjct: 374 CKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTA 433
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+TY I+ ++G ++ AL FE +MK + I P++V
Sbjct: 434 YTYIVFIDYYGKSGDSVSALETFE-----------------------KMKTKGIAPNIVA 470
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ + A EAK + + D G+ P+ VT+N++M K G++DEA +LL M+
Sbjct: 471 CNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMM 530
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G P+ V N+L++ RV+ A ++F+ M+ M TV +Y+ L+ G KN +I+
Sbjct: 531 ENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQ 590
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ L+ M+ KG P+ + +NTLF L + +V A K+ +M G D +TY T I
Sbjct: 591 EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 650
Query: 363 DGLCKNSYIVEAVELFRTLRIL 384
GL KN + EA+ F ++ L
Sbjct: 651 FGLVKNGQVKEAMCFFHQMKKL 672
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 197/421 (46%), Gaps = 58/421 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +++ L L K + D+V+ L K + + GL P++YT+ I I + G+++ + +
Sbjct: 221 PSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEI 280
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R+ P+ VT+T LI LC ++ A +F K++ +P+ TY TL++
Sbjct: 281 LKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLD---- 336
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
F +D K+ + +M+ + PDVVT+T ++ C A
Sbjct: 337 -------------------RFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAG 377
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
++ EA L M DQG+ PN+ T+N ++ L + ++D+A L M +GV+P A+ Y
Sbjct: 378 NFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYI 437
Query: 255 TLMD-----------------------------------GFCLTGRVNRAKELFVSMESM 279
+D GR AK++F ++ +
Sbjct: 438 VFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDI 497
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G +Y++++ Y K EI+ A+ L EM+ G +PDV++ N+L L++ +V+ A
Sbjct: 498 GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+K+F M+ + TY T + GL KN I EA+ELF + C + +N L D
Sbjct: 558 WKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDC 617
Query: 400 L 400
L
Sbjct: 618 L 618
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 178/373 (47%), Gaps = 12/373 (3%)
Query: 40 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
+++ G + Y+YN LI+ K + V R++ F P+ T++SL+ GL
Sbjct: 176 LRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGK 235
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS-GNGEFGVE 158
I L ++ G +PNV+T+ I L R G A + + M G G V
Sbjct: 236 RRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVT 295
Query: 159 GFV-----------DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
V D AKE+F +MK PD VTY +++ F D + K EM
Sbjct: 296 YTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEME 355
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
G P+VVTF +++D LCK G EA LD+M G+ PN YNTL+ G R++
Sbjct: 356 KDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLD 415
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A ELF +MES+G T ++Y + I+ Y K+ + AL + +M +KGI P++V N
Sbjct: 416 DALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASL 475
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
L + + A ++F ++ G+ D+ TY + K I EA++L + CE
Sbjct: 476 YSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCE 535
Query: 388 LDIRAYNCLIDGL 400
D+ N LI+ L
Sbjct: 536 PDVIVVNSLINTL 548
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 181/375 (48%), Gaps = 16/375 (4%)
Query: 23 LFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI-LINCFCKMGRVSHGFVVLGRILRS 81
L G + D +S +RL + G+ D + + +I CK VS + + +
Sbjct: 719 LIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKD 778
Query: 82 C-FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
P T+ LI GL I A +F +++ GC P+V TYN L++ ++G
Sbjct: 779 LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDE 838
Query: 141 ALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ-MKDENINPDVVTYTSVI 187
L++EM++ E G VD A +L+ M D + +P TY +I
Sbjct: 839 LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 898
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
G + EAK L M+D G +PN +N++++ K G+ D A L M++ GVR
Sbjct: 899 DGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVR 958
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P+ Y+ L+D C+ GRV+ F ++ G V Y+++ING K+ +E AL L
Sbjct: 959 PDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVL 1018
Query: 308 YGEM-LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
+ EM S+GI PD+ YN+L + L VE A K+++E+QR G+ + +T+ I G
Sbjct: 1019 FNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYS 1078
Query: 367 KNSYIVEAVELFRTL 381
+ A +++T+
Sbjct: 1079 LSGKPEHAYAVYQTM 1093
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 200/472 (42%), Gaps = 86/472 (18%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG-- 71
PP +FN LF CL KN L + ++ G PD++TYN +I K G+V
Sbjct: 605 PPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMC 664
Query: 72 ------------FVVL----------------------------------------GRIL 79
FV L G IL
Sbjct: 665 FFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSIL 724
Query: 80 RSCFTPNAVTFTS-----------------LIKGLCAESRIMEAAALFTKL-RVFGCEPN 121
NAV+F+ +I+ C + + A LF K + G +P
Sbjct: 725 AEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPK 784
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFL 169
+ TYN LI GL +A ++F ++ S +G G +D+ EL+
Sbjct: 785 LPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYK 844
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM-DQGVQPNVVTFNVIMDELCKN 228
+M + +T+ VI G A + ++A L ++M D+ P T+ ++D L K+
Sbjct: 845 EMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKS 904
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G++ EA +L + M+ G RPN +YN L++GF G + A LF M G + +Y
Sbjct: 905 GRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTY 964
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
S+L++ C ++ L + E+ G+ PDVV YN + L + H++E A LF+EM+
Sbjct: 965 SVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKT 1024
Query: 349 D-GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G+ D +TY + I L + EA +++ ++ E ++ +N LI G
Sbjct: 1025 SRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1076
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 158/349 (45%), Gaps = 60/349 (17%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV------ 68
P + ++N+L G L + + +F ++ STG PD+ TYN L++ + K G++
Sbjct: 783 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842
Query: 69 --------------SHGFVVLGRILRSC----------------FTPNAVTFTSLIKGLC 98
+H V+ G + F+P A T+ LI GL
Sbjct: 843 YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902
Query: 99 AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE 158
R+ EA LF + +GC PN YN LING FG
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILING-----------------------FGKA 939
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
G D A LF +M E + PD+ TY+ ++ C +E E+ + G+ P+VV +
Sbjct: 940 GEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCY 999
Query: 219 NVIMDELCKNGKMDEASRLLDLM-IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
N+I++ L K+ +++EA L + M G+ P+ + YN+L+ + G V A +++ ++
Sbjct: 1000 NLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQ 1059
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
G VF+++ LI GY + + E A ++Y M++ G P+ Y L
Sbjct: 1060 RAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 176/398 (44%), Gaps = 13/398 (3%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINCFCKMGRVS 69
+ S P + S + L D+ S FK + + L T N ++ G++
Sbjct: 76 KSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLE 135
Query: 70 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
V + + + T+ ++ K L + + +A K+R FG N ++YN LI
Sbjct: 136 EMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLI 195
Query: 130 NGLYRTGHTIVALNLFEEM------------ASGNGEFGVEGFVDKAKELFLQMKDENIN 177
+ L ++ A+ ++ M +S G +D L +M+ +
Sbjct: 196 HLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLK 255
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P+V T+T IR A NEA +L M D+G P+VVT+ V++D LC K+D A +
Sbjct: 256 PNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEV 315
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
+ M +P+ Y TL+D F ++ K+ + ME G V +++IL++ CK
Sbjct: 316 FEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCK 375
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
A M +GI P++ YNTL L +H+++ A +LF M+ GV +T
Sbjct: 376 AGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYT 435
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
Y FID K+ V A+E F ++ +I A N
Sbjct: 436 YIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNA 473
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 110/250 (44%), Gaps = 22/250 (8%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
+++ R P C++ L L+K+ LF+ + G P+ YNILIN F K G
Sbjct: 881 LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAG 940
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ R+++ P+ T++ L+ LC R+ E F +L+ G P+V YN
Sbjct: 941 EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1000
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
+INGL ++ AL LF EM + G I PD+ TY S+
Sbjct: 1001 LIINGLGKSHRLEEALVLFNEMKTSRG----------------------ITPDLYTYNSL 1038
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I A EA + E+ G++PNV TFN ++ +GK + A + M+ G
Sbjct: 1039 ILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGF 1098
Query: 247 RPNAFVYNTL 256
PN Y L
Sbjct: 1099 SPNTGTYEQL 1108
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 117/246 (47%)
Query: 155 FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
V+G + +A +M++ + +Y +I + EA + M+ +G +P+
Sbjct: 163 LSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPS 222
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
+ T++ +M L K +D LL M +G++PN + + + G++N A E+
Sbjct: 223 LQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILK 282
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
M+ GC V +Y++LI+ C ++++ A ++ +M + KPD V Y TL +
Sbjct: 283 RMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNR 342
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
++ + + EM++DG D T+ +D LCK EA + +R ++ YN
Sbjct: 343 DLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYN 402
Query: 395 CLIDGL 400
LI GL
Sbjct: 403 TLICGL 408
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLN-STGLFPDLYTYNILINCFCKMGRVSHGFV 73
P V +N++ L K+ + L LF + S G+ PDLYTYN LI G V
Sbjct: 994 PDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGK 1053
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ I R+ PN TF +LI+G + A A++ + G PN TY L N
Sbjct: 1054 IYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
Length = 532
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 182/373 (48%), Gaps = 15/373 (4%)
Query: 42 RLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAES 101
R S + P TY ILI+C C +G ++ F LG+I+++ NA++FT +++ LCAE
Sbjct: 3 RAGSKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEK 62
Query: 102 RIMEAAALFTKLRV-FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE------ 154
R +A + + GC P+VF+Y L+ GL A++L MA
Sbjct: 63 RTSDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVV 122
Query: 155 --------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
F E V KA LF +M D I PDVVT S+I G C ++A+ +L +M
Sbjct: 123 SYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQM 182
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
D+ + P+ T+N ++ +G++ EA R+L M + G PN Y+ L+D C G
Sbjct: 183 FDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGH 242
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
A+E+ SM V +Y L++GY ++ +L M+ G++PD I+N
Sbjct: 243 TEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQ 302
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
+ +++ A F++M++ G+ D +Y T IDGLCK + A+ F +
Sbjct: 303 IYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGL 362
Query: 387 ELDIRAYNCLIDG 399
DI + LI G
Sbjct: 363 SPDIVVFTNLIHG 375
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 186/394 (47%), Gaps = 31/394 (7%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ +F ML+ R PP V + N + L K + D + +++ + PD TYN L++
Sbjct: 141 YTLFCEMLD-RGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVH 199
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+ G++ +L ++ R PN VT++ LI LC EA + + P
Sbjct: 200 GYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNP 259
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE------FGVE-------GFVDKAKEL 167
NV TY L++G Y T +V +N ++ NG F ++ G +D+A
Sbjct: 260 NVATYGGLLHG-YATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLT 318
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
F +M+ + + PD+++Y ++I G C + A +M+D G+ P++V F ++
Sbjct: 319 FNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSM 378
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
GK ++A L M+ G+RP V+ T++D G+V AK LF M V S
Sbjct: 379 YGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVS 438
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y+ +I+GY +++ L L +MLS G+KP+ V +NT L D+M
Sbjct: 439 YNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNT----------------LLDDML 482
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
G+ D T T ID C++ I + + LFR +
Sbjct: 483 SMGLKPDVATCNTLIDSCCEDGRIEDVLTLFREM 516
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 166/355 (46%), Gaps = 28/355 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L + + + K+++ G P+ TY++LI+C CK G + +
Sbjct: 189 PDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREI 248
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++S PN T+ L+ G + ++E L + G P+ +N I +
Sbjct: 249 LNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVK 308
Query: 135 TGHTIVALNLFEEMASGNG-----EFGVE-------GFVDKAKELFLQMKDENINPDVVT 182
G A+ F +M +G G +D A F QM D+ ++PD+V
Sbjct: 309 CGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVV 368
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+T++I GF W +A+ L EMMD+G++P VV F ++D+L K GK+ EA L DLM
Sbjct: 369 FTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMP 428
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
V+PN YN ++ G+ L G+++ +L M S+G +++ L++
Sbjct: 429 IASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLD--------- 479
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+MLS G+KPDV NTL E ++E LF EM DT T
Sbjct: 480 -------DMLSMGLKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKTDTVT 527
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 178/388 (45%), Gaps = 25/388 (6%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP V S+ + K +LF + G+ PD+ T N +I+ CK+ +
Sbjct: 118 PPNVVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEE 177
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
VL ++ P+ T+ SL+ G + ++ EA + ++ G PN TY+ LI+ L
Sbjct: 178 VLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLC 237
Query: 134 R-TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ GHT +A+E+ M NP+V TY ++ G+
Sbjct: 238 KFGGHT------------------------EAREILNSMIQSRGNPNVATYGGLLHGYAT 273
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
D E L+ M+ GV+P+ FN+ + K G++DEA + M Q G+ P+
Sbjct: 274 KGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIIS 333
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
Y T++DG C GR++ A F M G + + ++ LI+G+ + E A L+ EM+
Sbjct: 334 YGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMM 393
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
+GI+P VV++ T+ LF+ +V A LFD M V + +Y I G +
Sbjct: 394 DRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLD 453
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
E ++L + + + + +N L+D +
Sbjct: 454 EVLKLLDDMLSVGLKPNAVTFNTLLDDM 481
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 196/410 (47%), Gaps = 15/410 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ +FD M + +P V F+ + D + LF+++ G+ P++ TYN +I+
Sbjct: 182 YQVFDIMCHCGVTPD-VYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIH 240
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK GR+ F ++ + P+ VT+ LI GL R EA + ++ G P
Sbjct: 241 GLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAP 300
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNG--------EFGVEGF-----VDKAKEL 167
N YNTLI+G R G+ AL + ++M S NG ++G+ ++ A+ L
Sbjct: 301 NNVVYNTLIDGYCRIGNISTALQIRDDMIS-NGISPNSVTCNSLIQGYCKSNQMEHAEHL 359
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
+M + T+TSVI C ++ A ++EM+ + +PN +++ LC+
Sbjct: 360 LEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQ 419
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
NGK EA L +++ G N N L+ G C G A +L M G S
Sbjct: 420 NGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSIS 479
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y+ LI CK ++E L EM+ +GI+PD+ YN L L + ++E A L+ E +
Sbjct: 480 YNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECK 539
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
++G D +TY IDG CK + + E +LF+ + +K E + Y LI
Sbjct: 540 KNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLI 589
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 197/397 (49%), Gaps = 12/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++ +L L K + +D + K ++ G P+ YN LI+ +C++G +S +
Sbjct: 265 PSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQI 324
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL-- 132
++ + +PN+VT SLI+G C +++ A L ++ G N T+ ++I+ L
Sbjct: 325 RDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCL 384
Query: 133 ---YRTGHTIVALNLFEEMASGNGEFGV-------EGFVDKAKELFLQMKDENINPDVVT 182
+ + + L +G + G +A EL+ ++ ++ + VT
Sbjct: 385 KCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVT 444
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
++I G C A EA LL EM+++G+ + +++N ++ CK GK++E +L + M+
Sbjct: 445 SNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMV 504
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G++P+ + YN L+ G C G++ A L+ + G ++Y I+I+GYCK +E
Sbjct: 505 RRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVE 564
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
L+ EM++ I+ + V+Y TL E + AF+L D+M+ G+ + TY + I
Sbjct: 565 EGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLI 624
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
GL + A +L +R ++ Y LI G
Sbjct: 625 HGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGG 661
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 179/407 (43%), Gaps = 58/407 (14%)
Query: 29 KNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 88
K+ + V LF L + GLFP L T N L++ K V + V + TP+
Sbjct: 139 KHLGFGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVY 198
Query: 89 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM 148
F++++ C R+ +A LF K+ G PNV TYN +I+GL + G
Sbjct: 199 LFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGR----------- 247
Query: 149 ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD 208
+D+A + +M+ E + P +VTY +I G ++EA C+L EM D
Sbjct: 248 ------------LDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSD 295
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
+G PN V +N ++D C+ G + A ++ D MI G+ PN+ N+L+ G+C + ++
Sbjct: 296 RGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEH 355
Query: 269 AKELFVSMESMG---------------CTHTVFS--------------------YSILIN 293
A+ L M + G C F ++L++
Sbjct: 356 AEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVS 415
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
G C+N + A+ L+ +L KG + V N L L E E A KL EM G+
Sbjct: 416 GLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVL 475
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D+ +Y T I CK + E +L + + D+ YN L+ GL
Sbjct: 476 DSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGL 522
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 173/390 (44%), Gaps = 23/390 (5%)
Query: 10 MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS 69
+R P +L L +N + L+ RL G + T N LI+ C+ G
Sbjct: 400 LRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKE 459
Query: 70 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
+L +L +++++ +LI C E ++ E L ++ G +P+++TYN L+
Sbjct: 460 EAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLL 519
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRG 189
+GL G A L+ E NG F PD TY +I G
Sbjct: 520 HGLCNMGKIEEAGGLWHE-CKKNGNF----------------------PDAYTYGIMIDG 556
Query: 190 FCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
+C AN E + L EM+ ++ N V + ++ C+NG M EA RL D M G+
Sbjct: 557 YCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQT 616
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
+ Y++L+ G G V+ A +L M G + V Y+ LI GYCK ++ S+
Sbjct: 617 SATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQ 676
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
EM + P+ + Y + ++ ++ A KL +EM + G+ D TY +G CK
Sbjct: 677 EMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEG 736
Query: 370 YIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ EA+++ + LD Y LIDG
Sbjct: 737 KMEEALKVCDLMSTGGISLDDITYTTLIDG 766
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 175/398 (43%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + L KN D +++ + P L TY +LIN K+ R +
Sbjct: 230 PNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCI 289
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + PN V + +LI G C I A + + G PN T N+LI G +
Sbjct: 290 LKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCK 349
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFV------------DKAKELFLQMKDENINPDVVT 182
+ A +L EEM +G G F D A ++M N P+
Sbjct: 350 SNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGL 409
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
T ++ G C +EA L ++++G N VT N ++ LC+ G +EA++LL M+
Sbjct: 410 LTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEML 469
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ ++ YNTL+ C G+V +L M G +++Y++L++G C +IE
Sbjct: 470 ERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIE 529
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ E G PD Y + + ++VE KLF EM + + Y T I
Sbjct: 530 EAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLI 589
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
C+N + EA L +R Y+ LI GL
Sbjct: 590 RAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGL 627
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 146/291 (50%), Gaps = 12/291 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S+N L K + L + + G+ PD+YTYN+L++ C MG++ +
Sbjct: 479 SYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHEC 538
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
++ P+A T+ +I G C +R+ E LF ++ E N Y TLI G+
Sbjct: 539 KKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNM 598
Query: 139 IVALNLFEEMAS-GNGEFGVE-----------GFVDKAKELFLQMKDENINPDVVTYTSV 186
A L ++M S G + G VD A +L +M+ E ++P+VV YT++
Sbjct: 599 REAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTAL 658
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G+C ++ +L EM V PN +T+ ++++ CK G M A++LL+ M Q G+
Sbjct: 659 IGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGI 718
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
P+A YN L +GFC G++ A ++ M + G + +Y+ LI+G+ K
Sbjct: 719 VPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHK 769
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 23/180 (12%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P +++ L L+ D+ L + GL P++ Y LI +CK+G++
Sbjct: 611 RGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHK 670
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+L + + PN +T+T +I G C + AA L ++ G P+ TYN L N
Sbjct: 671 VDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTN 730
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
G + G AL + + M++G I+ D +TYT++I G+
Sbjct: 731 GFCKEGKMEEALKVCDLMSTG-----------------------GISLDDITYTTLIDGW 767
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M SP VC + L G K V S+ + ++ + P+ TY I+IN
Sbjct: 639 LLDEMRKEGLSPNVVC-YTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGH 697
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK+G + +L + + P+AVT+ +L G C E ++ EA + + G +
Sbjct: 698 CKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDD 757
Query: 123 FTYNTLINGLYR 134
TY TLI+G ++
Sbjct: 758 ITYTTLIDGWHK 769
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 188/389 (48%), Gaps = 31/389 (7%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FN L A+ + + LF+ + S + P + T+N L++ K GR + V +L
Sbjct: 151 FNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEML 210
Query: 80 RS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ +P+ T+ LI+G C S + E F ++ F C+ +V TYNTL++GL R G
Sbjct: 211 GTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKV 270
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+A NL M K E +NP+VVTYT++IRG+C + E
Sbjct: 271 RIARNLVNGMGK---------------------KCEGLNPNVVTYTTLIRGYCMKQEVEE 309
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI-GVRPNAFVYNTLM 257
A +L EM +G++PN++T+N ++ LC+ K+D+ +L+ M G P+ F +NT++
Sbjct: 310 ALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTII 369
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK--- 314
C G ++ A ++F SM+ SYS LI C+ + + A L+ E+ K
Sbjct: 370 HLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEIL 429
Query: 315 ----GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
G KP YN +F L E + ++A ++ ++ + G D +Y T I G CK
Sbjct: 430 LSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGT-QDPQSYTTVIMGHCKEGA 488
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDG 399
EL + DI Y+ LIDG
Sbjct: 489 YESGYELLMWMLRRDFLPDIEIYDYLIDG 517
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 168/373 (45%), Gaps = 34/373 (9%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
++D ML P C++N+L KN D F+ + S D+ TYN L++
Sbjct: 205 VYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGL 264
Query: 63 CKMGRVSHGFVVLGRILRSC--FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C+ G+V ++ + + C PN VT+T+LI+G C + + EA + ++ G +P
Sbjct: 265 CRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKP 324
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMK-DENINPD 179
N+ TYNTL+ GL H + DK K++ +MK D +PD
Sbjct: 325 NMITYNTLVKGLCE-AHKL----------------------DKMKDVLERMKSDGGFSPD 361
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
T+ ++I C A + +EA + M + + +++ ++ LC+ G D A +L D
Sbjct: 362 TFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFD 421
Query: 240 -------LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
L+ + G +P A YN + + C G+ +A+ + + G T SY+ +I
Sbjct: 422 ELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRG-TQDPQSYTTVI 480
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
G+CK E L ML + PD+ IY+ L + + A + ++M +
Sbjct: 481 MGHCKEGAYESGYELLMWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQ 540
Query: 353 ADTWTYRTFIDGL 365
T T+ + + L
Sbjct: 541 PKTSTWHSVLAKL 553
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 89/186 (47%), Gaps = 3/186 (1%)
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM- 276
FN ++ + G E+ +L M I V P+ +N+LM GR N AKE++ M
Sbjct: 151 FNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEML 210
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
+ G + +Y++LI G+CKN ++ + EM S DVV YNTL L +V
Sbjct: 211 GTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKV 270
Query: 337 ERAFKLFDEMQR--DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
A L + M + +G+ + TY T I G C + EA+ + + + ++ YN
Sbjct: 271 RIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYN 330
Query: 395 CLIDGL 400
L+ GL
Sbjct: 331 TLVKGL 336
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 19/254 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLF-PDLYTYNILINCFCKMGRVSHGFV 73
P + ++N L L + D + + +R+ S G F PD +T+N +I+ C G +
Sbjct: 324 PNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALK 383
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-------RVFGCEPNVFTYN 126
V + + ++ ++++LI+ LC + A LF +L FG +P +YN
Sbjct: 384 VFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYN 443
Query: 127 TLINGLYRTGHTIVALNLFEE-MASGNGEFGV----------EGFVDKAKELFLQMKDEN 175
+ L G T A + + M G + EG + EL + M +
Sbjct: 444 PIFESLCEHGKTKKAERVIRQLMKRGTQDPQSYTTVIMGHCKEGAYESGYELLMWMLRRD 503
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
PD+ Y +I GF + AK L +M+ QP T++ ++ +L + G E+S
Sbjct: 504 FLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKLLEKGCAHESS 563
Query: 236 RLLDLMIQIGVRPN 249
++ +M++ VR N
Sbjct: 564 CVIVMMLEKNVRQN 577
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 52/267 (19%), Positives = 99/267 (37%), Gaps = 45/267 (16%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
S P S+N +F L ++ + ++L G D +Y +I CK G G+
Sbjct: 435 SKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGT-QDPQSYTTVIMGHCKEGAYESGY 493
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+L +LR F P+ + LI G + + + A K+ +P T+++++ L
Sbjct: 494 ELLMWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKL 553
Query: 133 YRTG----HTIVALNLFEEMASGNGEFGVE------------------------------ 158
G + V + + E+ N E
Sbjct: 554 LEKGCAHESSCVIVMMLEKNVRQNINLSTESLQLLFGREQHERAFEIINLLYKNGYYVKI 613
Query: 159 ----------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD 208
G + +A +L L + + N D+ + I C N +EA L E+++
Sbjct: 614 EEVAQFLLKRGKLSEACKLLLFSLENHQNVDIDLCNATILNLCKINKVSEAFSLCYELVE 673
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEAS 235
G+ + + ++ L + GK +EA+
Sbjct: 674 NGLHQELTCLDDLIAALEEGGKREEAA 700
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 188/391 (48%), Gaps = 34/391 (8%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
+ P V +N L L + V+ ++ + G+ P++YTYN+LI C+ RV
Sbjct: 123 AAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAAR 182
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+L + R P+ V+ T++I LC R+ EA + ++ G +YN +++ L
Sbjct: 183 RMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGA-----SYNAVVHAL 237
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL---QMKDENINPDVVTYTSVIRG 189
G+F + +E+FL +M + PD V YTS++
Sbjct: 238 C-------------------GQF-------RMREVFLVVDEMVHRGLRPDTVAYTSIVGA 271
Query: 190 FCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
FC A + A +L M+ +G PNV TF V++ +GK+ +A + + M+ G P+
Sbjct: 272 FCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPS 331
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
YN L+ G C G + RA +F M C V +YS LI+G+ K +++ A+S++
Sbjct: 332 TISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWN 391
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
+M + G KP+VV+Y + VL + ++A L D+M + +T T+ T I LC
Sbjct: 392 DMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLG 451
Query: 370 YIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
A+ +F +R C + R YN L+ GL
Sbjct: 452 RAGRALNVFHGMRRYGCPPNDRTYNELLHGL 482
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 188/436 (43%), Gaps = 44/436 (10%)
Query: 9 NMRPS--PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
NMR + P V ++N+L L +N + + G PD ++ +I+ CK+
Sbjct: 152 NMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLD 211
Query: 67 RVSHG------------------------------FVVLGRILRSCFTPNAVTFTSLIKG 96
R+ F+V+ ++ P+ V +TS++
Sbjct: 212 RLDEARGILAEMTPVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGA 271
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM-ASGNGEF 155
C + A A+ ++ GC PNV T+ L+ G + G AL ++ M A G
Sbjct: 272 FCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPS 331
Query: 156 GVE-----------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
+ G + +A +F M + PDV TY+++I GF A D + A +
Sbjct: 332 TISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWN 391
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
+M + G +PNVV + ++D LCK D+A L+D M PN +NTL+ C G
Sbjct: 392 DMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLG 451
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
R RA +F M GC +Y+ L++G + E AL + EML+ G + +V YN
Sbjct: 452 RAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYN 511
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
T L ++ ++ A L M G+ D +T+ I CK + A + + +
Sbjct: 512 TTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAV 571
Query: 385 KCELDIRAYNCLIDGL 400
C +I AY L+ GL
Sbjct: 572 NCPRNIVAYTSLMSGL 587
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 181/396 (45%), Gaps = 48/396 (12%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F + D M++ R P ++ + G K + ++ R+ + G P++ T+ +L+
Sbjct: 247 FLVVDEMVH-RGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVK 305
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
F G+V + ++ + P+ +++ LI+GLC + A +F+ + C P
Sbjct: 306 GFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLP 365
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFV------------DKAKELF 168
+V TY+TLI+G + G VA++++ +M + + V + D+A+ L
Sbjct: 366 DVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLI 425
Query: 169 LQMKDENINPDVVTYTSVIRGFC--------------------YAND----------WNE 198
+M EN P+ +T+ ++IR C ND + E
Sbjct: 426 DKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFRE 485
Query: 199 AKC-----LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
C +L EM++ G + ++V++N + LC+ + EA LL MI G++P+AF +
Sbjct: 486 GNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTF 545
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N ++ +C G V A + M+++ C + +Y+ L++G C +++ A+ +ML
Sbjct: 546 NAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLY 605
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
+GI P+ +N L +F L D + D
Sbjct: 606 EGICPNEATWNVLVRGIFTHLGTIGPMHLIDHIIED 641
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 202/409 (49%), Gaps = 13/409 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINC 61
+FD M R P V +NIL K +++RL ++P++ +YN++IN
Sbjct: 206 LFDEMPE-RGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMING 264
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK G+ F + R+ ++ + T+++LI GLC + A ++ ++ G P+
Sbjct: 265 LCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPD 324
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE-----------GFVDKAKELFLQ 170
V YNT++NG R G L L++ M V VD+A ++
Sbjct: 325 VVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWEL 384
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ +++ D +TY ++ G C N+A +L E + + ++ +++ LC+ G+
Sbjct: 385 LPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGR 444
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+DE + +LD M + G +PN V N +++GF ++ A F +M S GC TV +Y+
Sbjct: 445 LDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNT 504
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LING K + A +L EML KG KP+++ Y+ L L + +++ A L+ + G
Sbjct: 505 LINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG 564
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
D + I GLC + + +A++L+ ++ KC ++ +N L++G
Sbjct: 565 FKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEG 613
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 182/369 (49%), Gaps = 13/369 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+++ L L + + D ++K + G+ PD+ YN ++N + + GR+ + L ++
Sbjct: 292 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEE-CLELWKV 350
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ V++ LI+GL +++ EA +++ L C + TY L++GL + G+
Sbjct: 351 MEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYL 410
Query: 139 IVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSV 186
AL++ EE +G G+ EG +D+ + QM P+ +V
Sbjct: 411 NKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAV 470
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I GF A+ +A M+ +G P VVT+N +++ L K + EA L+ M+ G
Sbjct: 471 INGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGW 530
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+PN Y+ LM+G C +++ A L+ G V ++I+I+G C + ++E AL
Sbjct: 531 KPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQ 590
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
LY EM + P++V +NTL +++ ERA K++D + + G D +Y + GLC
Sbjct: 591 LYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLC 650
Query: 367 KNSYIVEAV 375
I +AV
Sbjct: 651 SCHRISDAV 659
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 169/352 (48%), Gaps = 23/352 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V S+NIL L +N D +S+++ L D TY +L++ CK G ++ +L
Sbjct: 359 VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILE 418
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ ++S+I GLC E R+ E A + ++ GC+PN N +ING R
Sbjct: 419 EAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRAS 478
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
AL F M S G F P VVTY ++I G A +
Sbjct: 479 KLEDALRFFGNMVS-KGCF----------------------PTVVTYNTLINGLSKAERF 515
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+EA L+ EM+ +G +PN++T++++M+ LC+ K+D A L ++ G +P+ ++N +
Sbjct: 516 SEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNII 575
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ G C +G+V A +L+ M+ C + +++ L+ G+ K ++ E A ++ +L G
Sbjct: 576 IHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGP 635
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
+PD++ YN L H++ A ++ GV T+ + + N
Sbjct: 636 QPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDN 687
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 121/480 (25%), Positives = 204/480 (42%), Gaps = 82/480 (17%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF M + P + S+N L L ++ +D S F + GL P+L TYNILI
Sbjct: 100 IFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKIS 159
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ + +L + F+P+ ++ +LI L + +A LF ++ G P+V
Sbjct: 160 CRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDV 219
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNG------EFGVE-------GFVDKAKELFL 169
YN LI+G ++ G + A ++E + G + V G D++ E++
Sbjct: 220 ACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWH 279
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD------ 223
+MK D+ TY+++I G C + + + A + EM + GV P+VV +N +++
Sbjct: 280 RMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAG 339
Query: 224 ------ELCK----------------------NGKMDEASRLLDLMIQIGVRPNAFVYNT 255
EL K N K+DEA + +L+ + ++ Y
Sbjct: 340 RIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGV 399
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN----------------- 298
L+ G C G +N+A + E+ F+YS +ING C+
Sbjct: 400 LVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHG 459
Query: 299 ------------------KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
++E AL +G M+SKG P VV YNTL L + + A+
Sbjct: 460 CKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAY 519
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
L EM G + TY ++GLC+ + A+ L+ + D++ +N +I GL
Sbjct: 520 ALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGL 579
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 126/240 (52%), Gaps = 2/240 (0%)
Query: 162 DKAKELFLQMKDE-NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
D+A ++F +M + P + +Y S++ +N W+EA+ + G+ PN+ T+N+
Sbjct: 95 DQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNI 154
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
++ C+ + D+A LL+ M + G P+ F Y TL++ G ++ A +LF M G
Sbjct: 155 LIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERG 214
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLS-KGIKPDVVIYNTLFVVLFEIHQVERA 339
T V Y+ILI+G+ K +I A ++ +L + P++ YN + L + + + +
Sbjct: 215 VTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDES 274
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
F+++ M+++ D +TY T I GLC + + A +++ + D+ YN +++G
Sbjct: 275 FEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNG 334
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 107/217 (49%), Gaps = 23/217 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L+K + + +L K + G P++ TY++L+N C+ ++ +
Sbjct: 497 PTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNL 556
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ L F P+ +I GLC+ ++ +A L+++++ C PN+ T+NTL+ G Y+
Sbjct: 557 WCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYK 616
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
V F ++A +++ + PD+++Y ++G C +
Sbjct: 617 ----------------------VRDF-ERASKIWDHILQYGPQPDIISYNITLKGLCSCH 653
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
++A L + +D+GV P +T+N+++ + NG +
Sbjct: 654 RISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGAL 690
>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
Length = 847
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 179/379 (47%), Gaps = 24/379 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+FD M+ R SP V + N + L + +++ + G+ P + TYN L++
Sbjct: 490 LSVFDKMIKSRLSPD-VKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLD 548
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+CK G+V G +L + R PN VT+ LI GL + +A L ++ G +
Sbjct: 549 SYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKV 608
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
+ +TYN LI G + G AL+L EEM + +P V
Sbjct: 609 SAYTYNPLIYGYFNKGLLAEALSLQEEMVL-----------------------KGASPTV 645
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
TY S I G C ++A L +M+ + P+VV++N ++ C+ G + +A L D
Sbjct: 646 ATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDE 705
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+ I + P YNTL+DG C G + A++L V M + G + +Y+IL+NG CK
Sbjct: 706 LRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGS 765
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ A + EML +G++ D Y T V ++ RAF L +EM G D Y
Sbjct: 766 LSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNV 825
Query: 361 FIDGLCKNSYIVEAVELFR 379
+DGLCK + EA EL +
Sbjct: 826 VVDGLCKLGNLEEASELLQ 844
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 156/344 (45%), Gaps = 23/344 (6%)
Query: 56 NILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV 115
++LI + K V V ++++S +P+ +++ L + + +A ++ +
Sbjct: 474 DLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGE 533
Query: 116 FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDEN 175
FG +P + TYNTL++ + G L+L EM +
Sbjct: 534 FGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEM-----------------------QRRG 570
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
P+ VTY +I G ++ +AK L+ EM+ G++ + T+N ++ G + EA
Sbjct: 571 CAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEAL 630
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
L + M+ G P YN+ + G C GR++ A + M + V SY+ LI GY
Sbjct: 631 SLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGY 690
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
C+ + A L+ E+ S + P +V YNTL L ++E A +L EM +G+A D
Sbjct: 691 CRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDI 750
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
TY ++G CK + A E F + ELD AY I G
Sbjct: 751 VTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVG 794
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 122/246 (49%)
Query: 155 FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
+ + V++ +F +M ++PDV ++R + ++A + M + G++P
Sbjct: 480 YSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPT 539
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
+VT+N ++D CK GK+ + LL M + G PN YN L++G G +AK L
Sbjct: 540 IVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIG 599
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
M G + ++Y+ LI GY + ALSL EM+ KG P V YN+ L ++
Sbjct: 600 EMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLG 659
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
++ A + +M + + D +Y T I G C+ +++A LF LR + I YN
Sbjct: 660 RMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYN 719
Query: 395 CLIDGL 400
L+DGL
Sbjct: 720 TLLDGL 725
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 14/172 (8%)
Query: 243 QIGVRPNAFVY----------NTLMDGFCLTGRV-NRAKELFVSMESMGCTHTVFSYSIL 291
Q G R + FV+ N + + + RV N V + GC + S IL
Sbjct: 414 QPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKIL 473
Query: 292 ---INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
I Y K +E LS++ +M+ + PDV N + +L + + +A +++ M
Sbjct: 474 DLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGE 533
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G+ TY T +D CK + + ++L ++ C + YN LI+GL
Sbjct: 534 FGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGL 585
>gi|42567170|ref|NP_194410.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659854|gb|AEE85254.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 369
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 174/354 (49%), Gaps = 23/354 (6%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G+ PD+ T + L+N FC + V G++ + + V T LI LC ++ A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKE 166
+ +++ G PNV TY++LI GL ++G A EM S
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDS---------------- 111
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
+ INP+V+T++++I + ++ + M+ + PNV T++ ++ LC
Sbjct: 112 -------KKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLC 164
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
+ ++DEA ++LDLMI G PN Y+TL +GF + RV+ +L M G
Sbjct: 165 MHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTV 224
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
S + LI GY + +I+ AL ++G M S G+ P++ YN + LF +VE+A F+ M
Sbjct: 225 SCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHM 284
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Q+ D TY I G+CK + EA +LF L+ + E D +AY +I L
Sbjct: 285 QKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAEL 338
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 134/268 (50%), Gaps = 35/268 (13%)
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEA------------------KCLLIE---- 205
L+M I PD+VT +S++ GFC +N +A +LI+
Sbjct: 1 MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60
Query: 206 -------------MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
M D+G+ PNVVT++ ++ LCK+G++ +A R L M + PN
Sbjct: 61 NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 120
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
++ L+D + G++++ ++ M M VF+YS LI G C + ++ A+ + M+
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
SKG P+VV Y+TL F+ +V+ KL D+M + GVAA+T + T I G + I
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKID 240
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
A+ +F + +IR+YN ++ GL
Sbjct: 241 LALGVFGYMTSNGLIPNIRSYNIVLAGL 268
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 145/309 (46%), Gaps = 23/309 (7%)
Query: 22 ILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRS 81
IL L KN+ L + KR+ G+ P++ TY+ LI CK GR++ L +
Sbjct: 53 ILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSK 112
Query: 82 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVA 141
PN +TF++LI ++ + +++ + +PNVFTY++LI GL
Sbjct: 113 KINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLC-------- 164
Query: 142 LNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
+ VD+A ++ M + P+VVTY+++ GF ++ ++
Sbjct: 165 ---------------MHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIK 209
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
LL +M +GV N V+ N ++ + GK+D A + M G+ PN YN ++ G
Sbjct: 210 LLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLF 269
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
G V +A F M+ + +Y+I+I+G CK ++ A L+ ++ K ++PD
Sbjct: 270 ANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFK 329
Query: 322 IYNTLFVVL 330
Y + L
Sbjct: 330 AYTIMIAEL 338
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 127/282 (45%), Gaps = 23/282 (8%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V +++ L L K+ ++S + P++ T++ LI+ + K G++S
Sbjct: 77 RGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSK 136
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
V +++ PN T++SLI GLC +R+ EA + + GC PNV TY+TL N
Sbjct: 137 VDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLAN 196
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
G +++ VD +L M + + V+ ++I+G+
Sbjct: 197 GFFKSSR-----------------------VDDGIKLLDDMPQRGVAANTVSCNTLIKGY 233
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
A + A + M G+ PN+ ++N+++ L NG++++A + M + +
Sbjct: 234 FQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDI 293
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
Y ++ G C V A +LF ++ +Y+I+I
Sbjct: 294 ITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 335
Score = 38.1 bits (87), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 42/95 (44%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S+NI+ L N + LS F+ + T D+ TY I+I+ CK V + +
Sbjct: 256 PNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDL 315
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
++ P+ +T +I L EA AL
Sbjct: 316 FYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 350
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 193/419 (46%), Gaps = 58/419 (13%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V S+N LF L++ D + LFK + + G+ P+L ++N ++N CK+G V
Sbjct: 155 VTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFC 214
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+++ F ++ T+TSLI G C + +A +F + GC N +Y LI+G G
Sbjct: 215 GLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVG 274
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+D+A ELF QMK++ PDV TYT ++ FC
Sbjct: 275 K-----------------------IDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKE 311
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG----------- 245
EA EM++ G++PNV T+ V++D CK GKMDE +L M++ G
Sbjct: 312 TEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNAL 371
Query: 246 ------------------------VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
V PN+ YN L+ GFC ++RA L M
Sbjct: 372 IDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKL 431
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
+ + +Y+ LI+G CK + ++ A L+ M+ G PD + L ++ +VE+A +
Sbjct: 432 SPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQ 491
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+F+ ++ A+ + Y IDG CK +A LF+ + C + +N L+DGL
Sbjct: 492 VFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGL 550
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 131/472 (27%), Positives = 208/472 (44%), Gaps = 77/472 (16%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAK----------NKHYDTVLSLFKRLN-STGLFPD 51
IF +L + P SFN L L N H T L+ FK ++ G
Sbjct: 45 IFTILLQPQWRKNP--SFNTLIPSLTPTHLSSLFNNPNLHPLTALNFFKWIHYQHGFIHT 102
Query: 52 LYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTF--------------TSLIKGL 97
+++Y L+ + G + V +++SC + + F TS +
Sbjct: 103 VHSYQPLLFILVRNGFLRAAENVRNSMIKSCVSSHEARFVLNLLTHHEFSLSVTSYNRLF 162
Query: 98 CAESR---IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF--------- 145
SR I E LF + G EPN+ ++NT++N + G+ +VA F
Sbjct: 163 MVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFC 222
Query: 146 ----------------EEMASGNGEFG-----------------VEGF-----VDKAKEL 167
E+ F + GF +D+A EL
Sbjct: 223 CDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALEL 282
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
F QMK++ PDV TYT ++ FC EA EM++ G++PNV T+ V++D CK
Sbjct: 283 FFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCK 342
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
GKMDE +L M++ G+ + +N L+DG+C G + A + SM+ +
Sbjct: 343 VGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRT 402
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y+ LI G+C+ K ++ A++L +M + P++V YNTL L + V+ A++L M
Sbjct: 403 YNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMI 462
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+DG D T+ FID LCK + +A ++F +L+ E + Y LIDG
Sbjct: 463 KDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDG 514
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 178/385 (46%), Gaps = 23/385 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ +L + L F+ + G+ P++YTY +LI+ FCK+G++ G +
Sbjct: 293 PDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEM 352
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L + V F +LI G C + +A + +++ PN TYN LI G R
Sbjct: 353 LSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCR 412
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ +D+A L +M + ++P++VTY ++I G C A
Sbjct: 413 -----------------------KKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKAR 449
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ A L M+ G P+ TF +D LCK GK+++A ++ + + + N F+Y
Sbjct: 450 VVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYT 509
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DG+C + + A LF M GC ++++L++G K ++E A+SL M
Sbjct: 510 ALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKF 569
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
KP V Y L + +RA D+M G + TY FI C+ ++EA
Sbjct: 570 DAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEA 629
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
E+ ++ LD Y+ L++
Sbjct: 630 EEMVVKIKEEGILLDSFIYDVLVNA 654
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 181/424 (42%), Gaps = 38/424 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N L L K + D+ L + G PD T+ I+C CKMG+V V
Sbjct: 433 PNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQV 492
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ N +T+LI G C + +A LF ++ GC PN T+N L++GL +
Sbjct: 493 FESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRK 552
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFV------------DKAKELFLQMKDENINPDVVT 182
G A++L + M + + V + D+A QM P+VVT
Sbjct: 553 EGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVT 612
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+ I+ +C EA+ +++++ ++G+ + ++V+++ G++D A +L M
Sbjct: 613 YTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMF 672
Query: 243 QIGVRPNAFVYNTLMDGFCLTG---------------RVNRAK-----------ELFVSM 276
G P+ Y+ L+ V+ A LF M
Sbjct: 673 DTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKM 732
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
GC V +YS LI G CK + + A L+ M GI P I+N+L ++
Sbjct: 733 VEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMH 792
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
E A +L D M A +Y+ + GL + +A E+FR+L D + L
Sbjct: 793 EEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVL 852
Query: 397 IDGL 400
+DGL
Sbjct: 853 LDGL 856
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 157/371 (42%), Gaps = 51/371 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FN+L L K + +SL + P ++TY ILI + +
Sbjct: 538 PNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMF 597
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ S PN VT+T+ IK C + R++EA + K++ G + F Y+ L+N
Sbjct: 598 LDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNA--- 654
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY-- 192
+G G +D A + ++M D P TY+ +++ +
Sbjct: 655 --------------------YGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEK 694
Query: 193 -------------------ANDWNEAKCLLI-----EMMDQGVQPNVVTFNVIMDELCKN 228
AN W A +I +M++QG PNV T++ ++ LCK
Sbjct: 695 YNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKV 754
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
+ A RL + M + G+ P+ ++N+L+ C G A L SM + SY
Sbjct: 755 EHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESY 814
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+L+ G + E A ++ +LS G D V++ L L V+ +L D M++
Sbjct: 815 KLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEK 874
Query: 349 DG--VAADTWT 357
G + +DT T
Sbjct: 875 TGCRLHSDTHT 885
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 108/257 (42%), Gaps = 46/257 (17%)
Query: 42 RLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAES 101
++ G+ D + Y++L+N + +G++ F VL R+ + P+ T++ L+K L E
Sbjct: 635 KIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEK 694
Query: 102 RIMEAAAL--------------------------FTKLRVFGCEPNVFTYNTLINGLYRT 135
E L F K+ GC PNV TY+ LI GL +
Sbjct: 695 YNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKV 754
Query: 136 GHTIVALNLFEEMASGNGEFGVE----------------GFVDKAKELFLQMKDENINPD 179
H +A LF M E G+ G ++A L M + N
Sbjct: 755 EHLSLAFRLFNHMK----ESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAH 810
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
+ +Y ++ G + +A+ + ++ G + V + V++D L + G +DE S+L D
Sbjct: 811 LESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRD 870
Query: 240 LMIQIGVRPNAFVYNTL 256
+M + G R ++ + L
Sbjct: 871 IMEKTGCRLHSDTHTML 887
>gi|356507504|ref|XP_003522504.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Glycine max]
Length = 555
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 184/396 (46%), Gaps = 35/396 (8%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
S P V SF+ +F L K D LF + G PDL Y++LIN +CK+GR+
Sbjct: 9 SVPSVISFSAIFSGLCHVKRADEAHRLFNVMKERGFQPDLICYSVLINGYCKLGRLEEAI 68
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
L + R ++SLI G + R EA A + ++ G P+V Y LI GL
Sbjct: 69 SFLRLLERDGLALGIKGYSSLIAGFFSARRYNEAHAWYGRMFKKGIVPDVVLYTILIRGL 128
Query: 133 YRTGHTIVALNLFEEMASGNGEFGV----------------EGFVDKAKELFLQMKDENI 176
G A + EM + G+ G +D+A+ L L++ +
Sbjct: 129 SSEGRVGEAAKMLGEMI----QIGLVPDAVCYNEIIKGLCDVGLLDRARSLQLEISEHQG 184
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
+V T+T +I C +A+ + +M G P++VTFN +MD LCK GK++EA
Sbjct: 185 FHNVCTHTIIICDLCKRGMAEKAQEIFNKMEKLGCFPSIVTFNALMDGLCKAGKLEEAHL 244
Query: 237 LLDLMIQIGVRPNAF--------------VYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
LL M +IG P+ F ++ C G++ A +L + + G
Sbjct: 245 LLYKM-EIGRSPSLFFRLSQGSDQVLDSVALQKKVEQMCEAGQLLDAYKLLIQLAGSGVM 303
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
+ +Y++LING+CK I GAL L+ +M +KG+ P+ V Y TL LF + + E AFK+
Sbjct: 304 PDIVTYNVLINGFCKASNINGALKLFKDMQNKGLSPNPVTYGTLIDGLFRVGREEDAFKI 363
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
M + G YR + LC+ + +A L+
Sbjct: 364 HKHMLKHGCEPSFEVYRALMTWLCRKKRVSQAFSLY 399
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 164/368 (44%), Gaps = 71/368 (19%)
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
S P+ ++F+++ GLC R EA LF ++ G +P++ Y+ LING + G
Sbjct: 7 SLSVPSVISFSAIFSGLCHVKRADEAHRLFNVMKERGFQPDLICYSVLINGYCKLGRLEE 66
Query: 141 ALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
A++ + G++G Y+S+I GF A +NEA
Sbjct: 67 AISFLRLLERDGLALGIKG-----------------------YSSLIAGFFSARRYNEAH 103
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
M +G+ P+VV + +++ L G++ EA+++L MIQIG+ P+A YN ++ G
Sbjct: 104 AWYGRMFKKGIVPDVVLYTILIRGLSSEGRVGEAAKMLGEMIQIGLVPDAVCYNEIIKGL 163
Query: 261 CLTGRVNRAK-----------------------------------ELFVSMESMGCTHTV 285
C G ++RA+ E+F ME +GC ++
Sbjct: 164 CDVGLLDRARSLQLEISEHQGFHNVCTHTIIICDLCKRGMAEKAQEIFNKMEKLGCFPSI 223
Query: 286 FSYSILINGYCKNKEIEGALSLYGEM-----------LSKGIKP--DVVIYNTLFVVLFE 332
+++ L++G CK ++E A L +M LS+G D V + E
Sbjct: 224 VTFNALMDGLCKAGKLEEAHLLLYKMEIGRSPSLFFRLSQGSDQVLDSVALQKKVEQMCE 283
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
Q+ A+KL ++ GV D TY I+G CK S I A++LF+ ++ +
Sbjct: 284 AGQLLDAYKLLIQLAGSGVMPDIVTYNVLINGFCKASNINGALKLFKDMQNKGLSPNPVT 343
Query: 393 YNCLIDGL 400
Y LIDGL
Sbjct: 344 YGTLIDGL 351
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 151/381 (39%), Gaps = 71/381 (18%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVL- 75
VC+ I+ L K + +F ++ G FP + T+N L++ CK G++ ++L
Sbjct: 188 VCTHTIIICDLCKRGMAEKAQEIFNKMEKLGCFPSIVTFNALMDGLCKAGKLEEAHLLLY 247
Query: 76 ----GRILRSCF--------TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
GR F ++V ++ +C ++++A L +L G P++
Sbjct: 248 KMEIGRSPSLFFRLSQGSDQVLDSVALQKKVEQMCEAGQLLDAYKLLIQLAGSGVMPDIV 307
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
TYN LING + + AL LF++M +++ ++P+ VTY
Sbjct: 308 TYNVLINGFCKASNINGALKLFKDM-----------------------QNKGLSPNPVTY 344
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA--------- 234
++I G +A + M+ G +P+ + +M LC+ ++ +A
Sbjct: 345 GTLIDGLFRVGREEDAFKIHKHMLKHGCEPSFEVYRALMTWLCRKKRVSQAFSLYLEYLK 404
Query: 235 ----------------------SRLLDLMIQIGVRPNAFV---YNTLMDGFCLTGRVNRA 269
+ ++++ R F Y L+ GFC +VN A
Sbjct: 405 NLRGREDNSINALEECFVRGEVEQAFRGLLELDFRFRDFALAPYTILLIGFCQAEKVNEA 464
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
+F ++ S LI G +N ++ A++++ L KG K + L +
Sbjct: 465 LLIFTVLDKFNININPASCVYLIRGLSENGRLDDAVNIFVYTLDKGFKLKSSVCEQLLKI 524
Query: 330 LFEIHQVERAFKLFDEMQRDG 350
L + + E A L M+ G
Sbjct: 525 LSQ-DKKECAIDLVPRMKSAG 544
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 186/414 (44%), Gaps = 48/414 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L + D L + ++G+ P++Y+Y I+IN C+ G +
Sbjct: 416 PDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNL 475
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ PNA + LI G E I A K+ P++F YN+LI GL
Sbjct: 476 LEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLST 535
Query: 135 TGHTIVALNLFEEMASGN---GEFGVEGFV---------DKAKELFLQMKDENINPDVVT 182
G A + ++ EF G + +KA +L QM + + P+ T
Sbjct: 536 VGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADT 595
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN----------------------VVT--- 217
YT ++ G+ +ND+ + +L M+ G +P+ V+T
Sbjct: 596 YTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVE 655
Query: 218 ----------FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
++ ++ LCK M++A LLD M + G+ P YN L+DGFC +G ++
Sbjct: 656 KNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDIS 715
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
RA+ +F S+ + G +Y+ LI+G CKN +I A LY EML +GI PD +YN L
Sbjct: 716 RARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLA 775
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+ +E+A L +EM G A+ + T + G CK + E +L +
Sbjct: 776 TGCSDAADLEQALFLTEEMFNRGY-ANVSLFNTLVHGFCKRGKLQETEKLLHVM 828
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 177/385 (45%), Gaps = 23/385 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ K + +D +F+ + + TYN++I+ C+ G V F
Sbjct: 241 PDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGF 300
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ +P+A T+ +L+ GLC SR+ EA AL ++ G +PN+ Y TL++G +
Sbjct: 301 KEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMK 360
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G T A ++ +EM S + P+ + Y ++IRG C
Sbjct: 361 EGKTAEAFDILKEMISAG-----------------------VQPNKIMYDNLIRGLCKIG 397
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
A LL EM+ G++P+ T+N +M + D A LL+ M G+ PN + Y
Sbjct: 398 QLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYG 457
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+++G C G A L M S G F Y+ LI G+ K I A +M
Sbjct: 458 IMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKA 517
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
+ PD+ YN+L L + ++E A + + ++Q+ G+ D +TY I G CK + +A
Sbjct: 518 NVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKA 577
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+L R + + + Y L++G
Sbjct: 578 DQLLRQMLNSGLKPNADTYTDLLEG 602
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 187/411 (45%), Gaps = 13/411 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F I M++ P + N++ G L K L K + GL PD +TYN L+
Sbjct: 368 FDILKEMISAGVQPNKIMYDNLIRG-LCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQ 426
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+ F +L + S PN ++ +I GLC EA L ++ G +P
Sbjct: 427 GHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKP 486
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELF 168
N F Y LI G + G+ +A E+M N G +++A+E +
Sbjct: 487 NAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYY 546
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
Q++ + PD TY+ +I G+C + +A LL +M++ G++PN T+ +++ K+
Sbjct: 547 AQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKS 606
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
++ S +L M+ G +P+ +Y ++ + + A + +E G + Y
Sbjct: 607 NDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIY 666
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
S LI+G CK ++E A+ L EM +G++P +V YN L + RA +FD +
Sbjct: 667 SSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILA 726
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G+ + TY IDG CKN I +A +L++ + D YN L G
Sbjct: 727 KGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATG 777
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 171/399 (42%), Gaps = 23/399 (5%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
I D R P ++L K + + GL P N L+
Sbjct: 158 AIQDTDHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKD 217
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
+ + + + G + + P+ T+++ I+ C A +F ++R C N
Sbjct: 218 LLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMN 277
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
TYN +I+GL R+G A EEM D ++PD
Sbjct: 278 EVTYNVMISGLCRSGAVEEAFGFKEEMV-----------------------DYGLSPDAF 314
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY +++ G C + EAK LL EM G++PN+V + ++D K GK EA +L M
Sbjct: 315 TYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEM 374
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
I GV+PN +Y+ L+ G C G++ RA +L M +G F+Y+ L+ G+ + +
Sbjct: 375 ISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDK 434
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+GA L EM + GI P+V Y + L + + + A L +EM +G+ + + Y
Sbjct: 435 DGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPL 494
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I G K I A E + D+ YN LI GL
Sbjct: 495 IIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGL 533
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 159/355 (44%), Gaps = 43/355 (12%)
Query: 85 PNAVTFTSLIKGLCAESRIMEAAALFTKL-----------------------RVFGCEPN 121
P+A F L LCA S +A L ++ R P+
Sbjct: 113 PSADAFARLAASLCAASLFPQANGLLHQMILAHPHPPLVLASIQRAIQDTDHRSRSPSPS 172
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV-------EGFVD-----KAKELFL 169
+ L++ +TG A + MA + G+ G + A EL
Sbjct: 173 TAVLDVLVDTYKKTGSVRNAAQVVLMMA----DLGLAPTRRCCNGLLKDLLRADAMELLW 228
Query: 170 QMK----DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
++K I PDV TY++ I C A D++ AK + EM + N VT+NV++ L
Sbjct: 229 KLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGL 288
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
C++G ++EA + M+ G+ P+AF Y LM+G C R+ AK L M G +
Sbjct: 289 CRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNI 348
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
Y L++G+ K + A + EM+S G++P+ ++Y+ L L +I Q+ RA KL E
Sbjct: 349 VVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKE 408
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
M + G+ DT+TY + G + A EL +R ++ +Y +I+GL
Sbjct: 409 MIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGL 463
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 127/272 (46%), Gaps = 19/272 (6%)
Query: 29 KNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 88
K+ Y+ V S+ + + +G PD + Y I+I + + F+VL + ++ P+
Sbjct: 605 KSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLH 664
Query: 89 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM 148
++SLI GLC + + +A L ++ G EP + YN LI+G R+G A N+F+ +
Sbjct: 665 IYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSI 724
Query: 149 AS---------------GNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ GN + G + A +L+ +M D I PD Y + G A
Sbjct: 725 LAKGLVPNCVTYTALIDGNCK---NGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDA 781
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
D +A L EM ++G NV FN ++ CK GK+ E +LL +M+ + PNA
Sbjct: 782 ADLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTV 840
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
++ F G++ A +F ++ + +
Sbjct: 841 EKVVSEFGKAGKLGEAHRVFAELQQKKASQSA 872
>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
Length = 637
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 174/392 (44%), Gaps = 75/392 (19%)
Query: 39 LFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 98
LF + G+ P+ YTYN+L++ C+ V+ FV+ +L S PNAV FT+LI G C
Sbjct: 235 LFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFC 294
Query: 99 AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE 158
R EA +F + FG P V YN+L++G +R+G AL+L++EM
Sbjct: 295 KAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTR-------- 346
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
+ PD T + V+RG C A L + + GV N +
Sbjct: 347 ---------------LGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAY 391
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
N ++DE C+NG ++EA M ++GV PN Y++L+DG G++ A ++ M +
Sbjct: 392 NALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVA 451
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV----------------- 321
G V +Y+ LI+G+ KN I+ A + EM+ GI P+ +
Sbjct: 452 KGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQD 511
Query: 322 -----------------------------------IYNTLFVVLFEIHQVERAFKLFDEM 346
IY TL L+ Q A KLF M
Sbjct: 512 AVRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYM 571
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
++ G+ +D++TY I G C Y++ A+ L+
Sbjct: 572 RKSGMISDSFTYTLLIRGQCMLGYVLNAMMLY 603
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 114/374 (30%), Positives = 188/374 (50%), Gaps = 12/374 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + N + L K + LF + G+ P + TYN LIN G V+ +
Sbjct: 141 PALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEM 200
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ PN +T+TS+I LC E I +A LF ++ G PN +TYN L++G +
Sbjct: 201 WDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQ 260
Query: 135 TGHTIVALNLFEEMA-SGNGEFGV------EGF-----VDKAKELFLQMKDENINPDVVT 182
A L++E+ SG V +GF +AK++F M + P V
Sbjct: 261 GDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPV 320
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S++ G + D EA L EM G+ P+ T ++++ LC G++ A+R L+ +
Sbjct: 321 YNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVR 380
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ GV NA YN L+D +C G + A M +G V SYS LI+G+ K +++
Sbjct: 381 EDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQ 440
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+++Y EM++KGI+P+VV Y L + ++ AF+ EM +G++ + T +
Sbjct: 441 IAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLV 500
Query: 363 DGLCKNSYIVEAVE 376
DGLC+ + + +AV
Sbjct: 501 DGLCRENRVQDAVR 514
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 166/343 (48%), Gaps = 26/343 (7%)
Query: 57 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF 116
+L+ +MG + V R+ P +++ GL R A LF ++
Sbjct: 116 VLVIALSQMGLLDEALYVFRRLWT---LPALPACNAVLDGLVKARRSRCAWELFDEMLRR 172
Query: 117 GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI 176
G P+V TYNTLIN +G V KA+E++ QM I
Sbjct: 173 GMVPSVVTYNTLINACR-----------------------YQGAVAKAQEMWDQMVARQI 209
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
+P+V+TYTS+I C +A+ L M + G++PN T+NV+M C+ ++ A
Sbjct: 210 DPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFV 269
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
L ++ G+ PNA V+ TL+DGFC R + AK++F M G TV Y+ L++G
Sbjct: 270 LYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAF 329
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
++ + + ALSLY EM G+ PD + + L + Q++ A + + ++ DGV +
Sbjct: 330 RSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAA 389
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
Y ID C+N + EA+ + + E ++ +Y+ LIDG
Sbjct: 390 AYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDG 432
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 148/323 (45%), Gaps = 44/323 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N L ++ LSL++ + GL PD +T +I++ C G++
Sbjct: 316 PTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARF 375
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + NA + +LI C + EA A T++ G EPNV +Y++LI+G +
Sbjct: 376 LEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSK 435
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G +A+ ++ EM + + I P+VVTYT++I G
Sbjct: 436 LGKMQIAMAIYTEMVA-----------------------KGIEPNVVTYTALIHGHAKNG 472
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR------- 247
+ A EM++ G+ PN +T +V++D LC+ ++ +A R + M G++
Sbjct: 473 GIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFV--MEHSGIKYSDIHSF 530
Query: 248 ------------PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
PN+ +Y TL+ G L G+ A +LF M G F+Y++LI G
Sbjct: 531 FSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLLIRGQ 590
Query: 296 CKNKEIEGALSLYGEMLSKGIKP 318
C + A+ LY +M+ G+KP
Sbjct: 591 CMLGYVLNAMMLYADMMKIGVKP 613
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/382 (30%), Positives = 184/382 (48%), Gaps = 23/382 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S+N L L + L ++KR+ S GL P + TY+ L+ + +L +
Sbjct: 194 SYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEM 253
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PN T+T I+ L RI +A + + GC P+V TY LI+ L G
Sbjct: 254 ETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGK- 312
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+DKAKEL+ +M+ + PD+VTY +++ F D
Sbjct: 313 ----------------------LDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLET 350
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
K EM G P+VVT+ ++++ LCK+GK+D+A +LD+M G+ PN YNTL+
Sbjct: 351 VKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLIS 410
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G R++ A ELF +MES+G T +SY + I+ Y K + E AL + +M +GI P
Sbjct: 411 GLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMP 470
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
+ N L E+ ++ A +F+++ G++ D+ TY + K I +A +L
Sbjct: 471 SIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLL 530
Query: 379 RTLRILKCELDIRAYNCLIDGL 400
+ CE DI N LID L
Sbjct: 531 TEMLSEGCEPDIIVVNSLIDTL 552
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 203/421 (48%), Gaps = 58/421 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +++ L L + + T++ L + + + GL P++YTY I I + GR+ + +
Sbjct: 225 PSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGI 284
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P+ VT+T LI LCA ++ +A L+TK+R +P++ TY TL++
Sbjct: 285 LKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMS---- 340
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+FG G ++ K + +M+ + PDVVTYT ++ C +
Sbjct: 341 -------------------KFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSG 381
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
++A +L M +G+ PN+ T+N ++ L ++DEA L + M +GV P A+ Y
Sbjct: 382 KVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYV 441
Query: 255 TLMD-----------------------------------GFCLTGRVNRAKELFVSMESM 279
+D GR+ AK++F + +
Sbjct: 442 LFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNC 501
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G + +Y++++ Y K +I+ A L EMLS+G +PD+++ N+L L++ +V+ A
Sbjct: 502 GLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEA 561
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+++F ++ +A TY I GL K +++A++LF +++ C + +N L+D
Sbjct: 562 WQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDC 621
Query: 400 L 400
L
Sbjct: 622 L 622
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 190/382 (49%), Gaps = 15/382 (3%)
Query: 10 MRPSP--PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
MR S P + ++ L +TV + + + G PD+ TY IL+ CK G+
Sbjct: 323 MRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGK 382
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V F +L + PN T+ +LI GL R+ EA LF + G P ++Y
Sbjct: 383 VDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVL 442
Query: 128 LINGLYRTGHTIVALNLFEEM---------ASGNGEF---GVEGFVDKAKELFLQMKDEN 175
I+ + G AL+ FE+M A+ N G + +AK++F + +
Sbjct: 443 FIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCG 502
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
++PD VTY +++ + A ++A LL EM+ +G +P+++ N ++D L K G++DEA
Sbjct: 503 LSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAW 562
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
++ + + + P YN L+ G G++ +A +LF SM+ GC +++ L++
Sbjct: 563 QMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCL 622
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
CKN ++ AL ++ M PDV+ YNT+ L + + AF + +M++ ++ D
Sbjct: 623 CKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKK-FLSPDH 681
Query: 356 WTYRTFIDGLCKNSYIVEAVEL 377
T T + G+ K+ + +A+++
Sbjct: 682 VTLYTLLPGVVKDGRVEDAIKI 703
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 179/380 (47%), Gaps = 12/380 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ +L L D L+ ++ ++ PDL TY L++ F G +
Sbjct: 295 PDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRF 354
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + P+ VT+T L++ LC ++ +A + +RV G PN+ TYNTLI+GL
Sbjct: 355 WSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLN 414
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
AL LF M S +G G +KA + F +MK I P +
Sbjct: 415 LRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAA 474
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ + EAK + ++ + G+ P+ VT+N++M K G++D+A++LL M+
Sbjct: 475 CNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEML 534
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G P+ V N+L+D GRV+ A ++F ++ + TV +Y+ILI G K ++
Sbjct: 535 SEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLL 594
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL L+G M G P+ V +N L L + V+ A K+F M + D TY T I
Sbjct: 595 KALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTII 654
Query: 363 DGLCKNSYIVEAVELFRTLR 382
GL K A + ++
Sbjct: 655 YGLIKEGRAGYAFWFYHQMK 674
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 169/365 (46%), Gaps = 24/365 (6%)
Query: 23 LFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRS 81
L L K K LF + S G P +YN L++ + + +
Sbjct: 758 LIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNA 817
Query: 82 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVA 141
PN T+ L+ RI E L+ ++ GC+PN+ T+N +I+ L ++ A
Sbjct: 818 GCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKA 877
Query: 142 LNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
L+L+ E+ SG+ +P TY +I G A EA
Sbjct: 878 LDLYYEIISGD-----------------------FSPTPCTYGPLIGGLLKAGRSEEAMK 914
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
+ EM D +PN +N++++ K G ++ A L MI+ G+RP+ Y L++
Sbjct: 915 IFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLF 974
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
+TGRV+ A F ++ G SY+++ING K++ +E ALSL+ EM ++GI P++
Sbjct: 975 MTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELY 1034
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
YN L + V++A K+F+E+Q G+ + +TY I G K+ A +F+ +
Sbjct: 1035 TYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKM 1094
Query: 382 RILKC 386
I+ C
Sbjct: 1095 MIVGC 1099
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 179/400 (44%), Gaps = 13/400 (3%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
SP V + +L G + + D + + + ++ +GL + L+ C +
Sbjct: 678 SPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAI 737
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPNVFTYNTLING 131
++ + + LI+ LC + + ++A LF K + G P +YN L++G
Sbjct: 738 SFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDG 797
Query: 132 LYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPD 179
L T AL LF EM + G +D+ EL+ +M P+
Sbjct: 798 LLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPN 857
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
++T+ +I +N N+A L E++ P T+ ++ L K G+ +EA ++ +
Sbjct: 858 IITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFE 917
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M +PN +YN L++GF G VN A +LF M G + SY+IL+
Sbjct: 918 EMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTG 977
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++ A+ + E+ G+ PD V YN + L + ++E A LF EM+ G++ + +TY
Sbjct: 978 RVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYN 1037
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I + +A ++F L+ + E ++ YN LI G
Sbjct: 1038 ALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRG 1077
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 143/291 (49%), Gaps = 12/291 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N+L K+K D + L+ + G P++ T+NI+I+ K ++ +
Sbjct: 821 PNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDL 880
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
I+ F+P T+ LI GL R EA +F ++ + C+PN YN LING +
Sbjct: 881 YYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGK 940
Query: 135 TGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKDENINPDVVT 182
G+ +A +LF+ M ++ G VD A F ++K ++PD V+
Sbjct: 941 AGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVS 1000
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I G + EA L EM ++G+ P + T+N ++ G +D+A ++ + +
Sbjct: 1001 YNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQ 1060
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
+G+ PN F YN L+ G +G +RA +F M +GC+ +++ L N
Sbjct: 1061 FMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPN 1111
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 180/414 (43%), Gaps = 16/414 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F + D M +R P + ++N L L + D L LF + S G+ P Y+Y + I+
Sbjct: 387 FDMLDVM-RVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFID 445
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+ K+G ++ + P+ + + L RI EA +F + G P
Sbjct: 446 YYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSP 505
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELF 168
+ TYN ++ + G A L EM S E + G VD+A ++F
Sbjct: 506 DSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMF 565
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
++KD + P VVTY +I G +A L M + G PN VTFN ++D LCKN
Sbjct: 566 GRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKN 625
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
+D A ++ M + P+ YNT++ G GR A + M+ V Y
Sbjct: 626 DAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPDHVTLY 685
Query: 289 SILINGYCKNKEIEGALSLYGEMLSK-GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
+ L+ G K+ +E A+ + E + + G++ ++ L + ++E A + +
Sbjct: 686 T-LLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLV 744
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELF-RTLRILKCELDIRAYNCLIDGL 400
+ + D I LCK ++A +LF + + L +YNCL+DGL
Sbjct: 745 CNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGL 798
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 165/340 (48%), Gaps = 19/340 (5%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F F L P+P S+N L L + L LF + + G P+++TYN+L++
Sbjct: 775 FDKFTKSLGTHPTPE---SYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLD 831
Query: 61 CFCKMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 119
K R+ F + +L R C PN +T +I L + I +A L+ ++
Sbjct: 832 AHGKSKRIDELFELYNEMLCRGC-KPNIITHNIIISALVKSNSINKALDLYYEIISGDFS 890
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKE 166
P TY LI GL + G + A+ +FEEM NG FG G V+ A +
Sbjct: 891 PTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILING-FGKAGNVNIACD 949
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
LF +M E I PD+ +YT ++ ++A E+ G+ P+ V++N++++ L
Sbjct: 950 LFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLG 1009
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
K+ +++EA L M G+ P + YN L+ F G V++A ++F ++ MG VF
Sbjct: 1010 KSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVF 1069
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+Y+ LI G+ K+ + A S++ +M+ G P+ + L
Sbjct: 1070 TYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 183/441 (41%), Gaps = 66/441 (14%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP +FN L CL KN D L +F R+ PD+ TYN +I K GR + F
Sbjct: 609 PPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFW 668
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA----------AALFTKLRVFG----C- 118
+ ++ +P+ VT +L+ G+ + R+ +A + L T +V+G C
Sbjct: 669 FYHQ-MKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECI 727
Query: 119 -------EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQM 171
E F + N + + + I L L + + DK
Sbjct: 728 LIEAEIEEAISFAEGLVCNSICQDDNLI--LPLIRVLCKQKKALDAKKLFDKFT------ 779
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
K +P +Y ++ G N A L +EM + G PN+ T+N+++D K+ ++
Sbjct: 780 KSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRI 839
Query: 232 DEASRLLDLMIQIGVRPNAFVYN-----------------------------------TL 256
DE L + M+ G +PN +N L
Sbjct: 840 DELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPL 899
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ G GR A ++F M C Y+ILING+ K + A L+ M+ +GI
Sbjct: 900 IGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGI 959
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+PD+ Y L LF +V+ A F+E++ G+ DT +Y I+GL K+ + EA+
Sbjct: 960 RPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALS 1019
Query: 377 LFRTLRILKCELDIRAYNCLI 397
LF ++ ++ YN LI
Sbjct: 1020 LFSEMKNRGISPELYTYNALI 1040
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%)
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M Q + N T+ I L G + +A L M Q G NA+ YN L+ G
Sbjct: 148 MQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGF 207
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
A +++ M S G ++ +YS L+ + ++ + L EM + G++P++ Y
Sbjct: 208 CKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTI 267
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
VL +++ A+ + M+ +G D TY ID LC + +A EL+ +R
Sbjct: 268 CIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASS 327
Query: 386 CELDIRAYNCLI 397
+ D+ Y L+
Sbjct: 328 HKPDLVTYITLM 339
>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Vitis vinifera]
Length = 641
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 166/349 (47%), Gaps = 25/349 (7%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
C F + + P CSFNIL L + D LF + G PD+ TYN LIN
Sbjct: 223 CFFREQMGLH-GPFDSCSFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLING 281
Query: 62 FCKMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
FC++ V G +L +L ++ +P+ VT+TS+I G C ++ +A+ LF + G +P
Sbjct: 282 FCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKP 341
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
N FT+N LING + G + A N++EEM L L PD+
Sbjct: 342 NAFTFNILINGFGKVGDMVSAENMYEEM------------------LLLGCP-----PDI 378
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+T+TS+I G C + L E+ + + PN TF ++ + LCK ++ EA L
Sbjct: 379 ITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRD 438
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+ + F+YN ++DGFC G V+ A + ME C +Y+ILI G+C
Sbjct: 439 LKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCMKGR 498
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
+ A+S++ ML G PD + +L L + A+++ D
Sbjct: 499 LSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQIASED 547
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 162/350 (46%), Gaps = 24/350 (6%)
Query: 52 LYTYNILINCFCKMGRVSHGFVVLGRILRSCFTP-NAVTFTSLIKGLCAESRIMEAAALF 110
L YN L+N + +V V R P ++ +F LI+GLC ++ +A LF
Sbjct: 202 LVVYNKLLNQLVRGNQVDEA-VCFFREQMGLHGPFDSCSFNILIRGLCRIGKVDKAFELF 260
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQ 170
++R FGC P+V TYNTLING R +L +E+ S N
Sbjct: 261 NEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKN------------------ 302
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+++PDVVTYTS+I G+C +A L M+ G++PN TFN++++ K G
Sbjct: 303 ----DLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGD 358
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
M A + + M+ +G P+ + +L+DG C TG+V R+ +L+ + + + ++++I
Sbjct: 359 MVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAI 418
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L N CK + A ++ + I +YN + + V+ A + EM+
Sbjct: 419 LTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKR 478
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D TY I G C + EA+ +F + C D LI L
Sbjct: 479 CKPDKITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCL 528
>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
Length = 822
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 191/399 (47%), Gaps = 14/399 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++ L CL K + + SLF + GL P++ YN +I+ CK + V+
Sbjct: 272 PTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVI 331
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ S P+ +TF +LI GLC E + +A + PN +Y LI+G
Sbjct: 332 LKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCM 391
Query: 135 TGHTIVALNLFEEMASGNGE------FG-------VEGFVDKAKELFLQMKDENINPDVV 181
G + A +L EM G G FG V G V +A + +M + + PDV
Sbjct: 392 RGELMAASDLLMEMM-GRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVN 450
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y +I G C + AK +L EM+++ VQP+ + ++D ++ + +A ++ + M
Sbjct: 451 IYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFM 510
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
GVRP+ N ++ G+C G ++ A +M +GC F+Y+ +I+GY K +
Sbjct: 511 EHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNL 570
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
GAL +M+ + KP+VV Y++L + + A LF MQ + ++ + TY
Sbjct: 571 NGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTIL 630
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I L K ++ A F T+ + C + + L++GL
Sbjct: 631 IGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGL 669
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 181/375 (48%), Gaps = 12/375 (3%)
Query: 37 LSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 96
L L + G P + YN+LI+ +C+ G + G ++LG + F P VT+ SLI
Sbjct: 224 LKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINC 283
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG 156
L + + + +LF ++R G PNV YN++I+ L + A+ + ++M + +
Sbjct: 284 LGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPD 343
Query: 157 V------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
+ EG V KA+ + +NP+ ++YT +I GFC + A LL+
Sbjct: 344 IITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLM 403
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
EMM +G P+VVTF ++ L GK+ EA + + M + V P+ +YN L+ G C
Sbjct: 404 EMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKH 463
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
+ AK + M F Y+ LI+G+ +++ + A ++ M KG++PD+V N
Sbjct: 464 MLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCN 523
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
+ + + A M++ G D +TY T I G K + A+ +
Sbjct: 524 AMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKR 583
Query: 385 KCELDIRAYNCLIDG 399
KC+ ++ Y+ LI+G
Sbjct: 584 KCKPNVVTYSSLING 598
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 171/387 (44%), Gaps = 23/387 (5%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
S P V N L L + + +D L+ + D Y+ +L+ C GRV G
Sbjct: 165 SLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGL 224
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
++ + P+ V + LI G C + L ++ G P + TY +LIN L
Sbjct: 225 KLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCL 284
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
G +G ++K LFL+M+ ++P+V Y SVI C
Sbjct: 285 -----------------------GKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCK 321
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
+A +L +M G P+++TFN ++ LC G + +A L I+ + PN
Sbjct: 322 CWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLS 381
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
Y L+ GFC+ G + A +L + M G T V ++ LI+G ++ AL + +M
Sbjct: 382 YTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMT 441
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
+ + PDV IYN L L + H + A + +EM V D + Y T IDG ++ +
Sbjct: 442 ERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLG 501
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDG 399
+A ++F + DI + N +I G
Sbjct: 502 DARKIFEFMEHKGVRPDIVSCNAMIKG 528
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 112/240 (46%), Gaps = 1/240 (0%)
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ-GVQPNVVTFNV 220
D + M P +++ + A +A + + +Q G P V N
Sbjct: 115 DAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNR 174
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
++ L + + D+A +L D M+ + + L+ G CL GRV +L + G
Sbjct: 175 LLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAG 234
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
C V Y++LI+GYC+ ++ L L GEM +KG P +V Y +L L + +E+
Sbjct: 235 CIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIG 294
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LF EM++ G++ + Y + ID LCK +A+ + + + C+ DI +N LI GL
Sbjct: 295 SLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGL 354
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 119/246 (48%), Gaps = 1/246 (0%)
Query: 155 FGVEGFVDKAKELFLQMKDENIN-PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
+ G + KA ++ +++++ + P+V +++ W++A+ L EM+ +
Sbjct: 143 YADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGA 202
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
+ + V++ LC G+++E +L++ G P+ YN L+DG+C G + R L
Sbjct: 203 DNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLL 262
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
ME+ G T+ +Y LIN K ++E SL+ EM +G+ P+V IYN++ L +
Sbjct: 263 GEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKC 322
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
+A + +M G D T+ T I GLC ++ +A R + + +Y
Sbjct: 323 WSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSY 382
Query: 394 NCLIDG 399
LI G
Sbjct: 383 TPLIHG 388
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 147/357 (41%), Gaps = 39/357 (10%)
Query: 5 DYMLNM--RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
D ++ M R P V +F L L L + +++ +FPD+ YN+LI+
Sbjct: 400 DLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGL 459
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK + +L +L P+ + +LI G + +A +F + G P++
Sbjct: 460 CKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDI 519
Query: 123 FTYNTLINGLYRTG---HTIVALNLFEEMASGNGEF---------GVEGFVDKAKELFLQ 170
+ N +I G + G I+ ++ ++ EF +G ++ A
Sbjct: 520 VSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCD 579
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M P+VVTY+S+I G+C D + A+ L M + + PNVVT+ +++ L K K
Sbjct: 580 MIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDK 639
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGF------------CLTGRVNRAKELFVSMES 278
+ A + M+ PN + L++G C T V+ L V +
Sbjct: 640 VLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKK 699
Query: 279 MGCTHTVF--------SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
+ VF +Y+ +I C++ + AL M KG P+ + + +L
Sbjct: 700 L-----VFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLL 751
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 103/239 (43%)
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
D A++L+ +M E+ D + ++RG C E L+ G P+VV +NV+
Sbjct: 186 DDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVL 245
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
+D C+ G M LL M G P Y +L++ G + + LF+ M G
Sbjct: 246 IDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGL 305
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
+ V Y+ +I+ CK A+ + +M + G PD++ +NTL L V +A
Sbjct: 306 SPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEH 365
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
E R + + +Y I G C ++ A +L + D+ + LI GL
Sbjct: 366 FLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGL 424
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 120/285 (42%), Gaps = 29/285 (10%)
Query: 39 LFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 98
+F+ + G+ PD+ + N +I +C+ G +S + + + + P+ T+T++I G
Sbjct: 506 IFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYA 565
Query: 99 AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------ 152
+ + A + C+PNV TY++LING +TG T A LF M +
Sbjct: 566 KQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVV 625
Query: 153 ------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF------------CYAN 194
G + V +A F M + +P+ VT ++ G C +
Sbjct: 626 TYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTS 685
Query: 195 DWNEAKCLLIE----MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
+ + LL+ + D G P +N I+ LC++ + EA + M + G PN
Sbjct: 686 EVHGKDALLVVFKKLVFDIG-DPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNP 744
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+ +L+ GFC G+ + + + +F Y L + Y
Sbjct: 745 ITFLSLLYGFCSVGKSMNWRTILPNEFQQEEFEIIFRYKFLFDQY 789
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/401 (29%), Positives = 180/401 (44%), Gaps = 29/401 (7%)
Query: 22 ILFGCLAK-NKHYDTVLSL------------FKRLNSTGLFPDLYTYNILINCFCKMGRV 68
+L GC A N D VL L R+ + G P + TY L+ C+ +
Sbjct: 239 LLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQA 298
Query: 69 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTL 128
+LGR+ N V ++I+G E ++ A L+ + GC P+V TY+ L
Sbjct: 299 DEACAMLGRLPEV----NVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSIL 354
Query: 129 INGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENI 176
++GL + G A+ + +EM F G D A+ + QM +
Sbjct: 355 MHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGF 414
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
+ + Y +I C ++A L+ EM QG +P++ T+N ++ LC N M+EA
Sbjct: 415 SMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEH 474
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+ +I+ GV N YNTL+ GR L M GC V SY+ LI C
Sbjct: 475 IFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALC 534
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K ++ +++L EM++KGIKP+ YN L L + +V A +L EM G+ D
Sbjct: 535 KEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIV 594
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
TY T I+GLCK + A+ L L DI YN LI
Sbjct: 595 TYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILI 635
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 194/410 (47%), Gaps = 16/410 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M P S+N++ LA+ + L L++R+ + P +T+ +
Sbjct: 128 LLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARAL 187
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C++GR +L + R P+AV + ++I L A+ + EAA L ++ + GC +V
Sbjct: 188 CRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADV 247
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNG-------EFGVEGF-----VDKAKELFLQ 170
T+N L+ GL G A L + M + F ++G D+A + +
Sbjct: 248 NTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGR 307
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ + N VV +VIRG A L M +G P+V T++++M LCK G+
Sbjct: 308 LPEVN----VVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGR 363
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
A R+LD M + G PN Y+TL+ FC G + A+ + M + G + Y+
Sbjct: 364 FGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNG 423
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+I CK+ +++ A L EM S+G KPD+ YNT+ L +E A +F + +G
Sbjct: 424 IIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEG 483
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
V A+ TY T I L +N E + L + + C+LD+ +YN LI L
Sbjct: 484 VVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKAL 533
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 181/368 (49%), Gaps = 23/368 (6%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ + PP V +++IL L K + + + + + G P++ TY+ L++ FC+ G
Sbjct: 338 MMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNG 397
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+L ++L F+ N+ + +I LC + ++ +A L +++ GC+P++ TYN
Sbjct: 398 MWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYN 457
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
T+I L +L EE A+ +F + +E + + +TY ++
Sbjct: 458 TMIYHLCNN-------DLMEE----------------AEHIFRNLIEEGVVANGITYNTL 494
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I W E L EM+ G Q +V+++N ++ LCK G +D + LL+ M+ G+
Sbjct: 495 IHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGI 554
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+PN F YN L++ C G+V A EL M + G T + +Y+ LING CK AL+
Sbjct: 555 KPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALN 614
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L ++ ++ + PD+V YN L ++ ++ A L D+ G+ + T+ +
Sbjct: 615 LLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNFV 674
Query: 367 KNSYIVEA 374
+ + +E
Sbjct: 675 RQTVNLEG 682
>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
Length = 795
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 198/431 (45%), Gaps = 50/431 (11%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V FN+L +N + L + + + G PD+ TYN L+N FCK+G + ++G
Sbjct: 17 VEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMG 76
Query: 77 RILRSCFTPNAVTFTSLI-----------------------------------KGLCAES 101
I PN +T+T+LI GLC
Sbjct: 77 EISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSG 136
Query: 102 RIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV---- 157
++ EA ++F ++ G PN F+Y TLI+ L++ G+ A L M F V
Sbjct: 137 KVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYT 196
Query: 158 --------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
G + A+++F + +E++ P+ VTY+++I G C D N+ + LL EM ++
Sbjct: 197 ALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEK 256
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
+ PNV+ ++ I+D K G ++EA ++ M+Q + PN FVY TL+DG+ + A
Sbjct: 257 HIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIA 316
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
+LF M+S G F +N ++ +E A L+ +M+S+G+ PD V Y ++
Sbjct: 317 LDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDG 376
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK-NSYIVEAVELFRTLRILKCEL 388
F+ + AF + EM D Y I+GL K Y E+ +R L
Sbjct: 377 FFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY--ESESFHTGMRQLGLAP 434
Query: 389 DIRAYNCLIDG 399
D +N +I+
Sbjct: 435 DSATFNTMINA 445
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 197/430 (45%), Gaps = 46/430 (10%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V + L L K + +F+ L L P+ TY+ LI+ CK+G V+ G ++L
Sbjct: 192 VVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQ 251
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ PN + ++S++ G + + EA + K+ PNVF Y TLI+G ++
Sbjct: 252 EMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKAD 311
Query: 137 HTIVALNLFEEMASGNGE---FGVEGFV---------DKAKELFLQMKDENINPDVVTYT 184
+AL+LF+EM S E F ++ FV ++A ELF M + PD V YT
Sbjct: 312 QRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYT 371
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQ----------------------------------G 210
S++ GF A ++A + EM ++ G
Sbjct: 372 SMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLG 431
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
+ P+ TFN +++ CK G + A +LL+ M G++PN+ N L+ C G + +
Sbjct: 432 LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTM 491
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
+L M MG T ++ +++ K++ + L ++ +++ G+K D+ YNTL
Sbjct: 492 DLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTF 551
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
+ + RA +F +M G+ AD TY I G C +S++ +A + + ++
Sbjct: 552 CRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNV 611
Query: 391 RAYNCLIDGL 400
YN L+ GL
Sbjct: 612 ETYNILLGGL 621
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 171/371 (46%), Gaps = 24/371 (6%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
L ++ + LFK + S GL PD Y +++ F K G+ S F + + +
Sbjct: 342 LKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFD 401
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
V + LI GL + E+ + T +R G P+ T+NT+IN + G+ AL L
Sbjct: 402 VVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLN 460
Query: 147 EMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
EM S +G++ P+ +T +++ C A + + LL +M
Sbjct: 461 EMKS----YGLK-------------------PNSITCNILVQRLCAAGEIEKTMDLLNDM 497
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+ G P T ++D K+ + D + D ++ +GV+ + YNTL+ FC G +
Sbjct: 498 LVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMI 557
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
RA +F M G + +Y+ LI+GYC + ++ A +++ +ML++G+ P+V YN L
Sbjct: 558 RRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNIL 617
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
L ++ A L ++M+ G+ + TY + G K + E V+L+ +
Sbjct: 618 LGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGF 677
Query: 387 ELDIRAYNCLI 397
R YN LI
Sbjct: 678 VPKTRTYNVLI 688
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 174/358 (48%), Gaps = 25/358 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++N+L L K Y++ S + GL PD T+N +IN +CK G + + +L
Sbjct: 402 VVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLN 460
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ PN++T L++ LCA I + L + V G P T+ +++ ++
Sbjct: 461 EMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSR 520
Query: 137 HTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKDENINPDVVTYT 184
V L++ +++ + + G + +A +F M + I D++TY
Sbjct: 521 RADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYN 580
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
++I G+C ++ +A + +M+ +GV PNV T+N+++ L + EA+ L++ M +
Sbjct: 581 ALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKER 640
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G+ PNA Y+ L+ G G + +L+ M + G +Y++LI+ + K K++ A
Sbjct: 641 GLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQA 700
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ-------VERAF-----KLFDEMQRDG 350
L EM +GI P+ Y+ L +++ + ++R++ +LF+EM G
Sbjct: 701 KELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKG 758
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 105/190 (55%)
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
++ +V FNV++D C+NG++ A LL+ M G P+ YNTLM+GFC G + AK
Sbjct: 13 IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
+L + + V +Y+ LI+ YCK++ +E AL +Y EM K + PDVV Y + L
Sbjct: 73 KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
+ +VE A +F EM+ GV + ++Y T ID L K + EA L + + D+
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192
Query: 391 RAYNCLIDGL 400
Y L+DGL
Sbjct: 193 VVYTALMDGL 202
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 109/224 (48%)
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
I V + +I G+C + + A LL M +G P++VT+N +M+ CK G + A
Sbjct: 13 IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+L+ + + + PN Y TL+D +C + + A ++ M V +Y+ ++NG
Sbjct: 73 KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
CK+ ++E A S++ EM G+ P+ Y TL LF+ V AF L M G+ D
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
Y +DGL K A ++F+ L + Y+ LIDG
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDG 236
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 126/304 (41%), Gaps = 60/304 (19%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ + ML M P P +L +K++ D +L + +L G+ DL TYN LI+ F
Sbjct: 493 LLNDMLVMGFHPTPTTHKAVLDAS-SKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTF 551
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C++G + +V ++ + +T+ +LI G C S + +A A+ +++ G PNV
Sbjct: 552 CRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNV 611
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEM---------------ASGNGEFG----------- 156
TYN L+ GL A L +M SG+G+ G
Sbjct: 612 ETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCE 671
Query: 157 --VEGFVDK-------------------AKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
+GFV K AKEL +M+ I P+ TY +I G+ +
Sbjct: 672 MITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSK 731
Query: 196 W------------NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
EAK L EM ++G P T I L K GK +A R+L+ + +
Sbjct: 732 QPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYK 791
Query: 244 IGVR 247
V+
Sbjct: 792 KKVK 795
>gi|115474407|ref|NP_001060800.1| Os08g0107700 [Oryza sativa Japonica Group]
gi|113622769|dbj|BAF22714.1| Os08g0107700, partial [Oryza sativa Japonica Group]
Length = 374
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/353 (31%), Positives = 179/353 (50%), Gaps = 25/353 (7%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRL---NSTGLFPDLYTYNILIN 60
FD +L+ RP+ + N A++ +SLF+R+ + P+L TY+++I+
Sbjct: 42 FDELLH-RPTTSSIVDLNRALSDAARHSPA-VAISLFRRMVMVARPKVPPNLITYSVVID 99
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCE 119
C ++G + F LGR++RS +T A+TF+ L+K LC + R EA + ++ V GC
Sbjct: 100 CCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCT 159
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPD 179
PNVF+Y L+ GL + AL+L M + G G+ PD
Sbjct: 160 PNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRG--GY----------------PPD 201
Query: 180 VVTYTSVIRGFCY-ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
VV+Y +VI G + A L +M+DQG+ P+VVT+N I+ L K MD+A+ +L
Sbjct: 202 VVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVL 261
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
M++ G PN +N+L+ G+C +G+ N A +F M G VF+Y+ L+ CKN
Sbjct: 262 VRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKN 321
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
A ++ M+ +G KP+ Y TL + + L D M R+G+
Sbjct: 322 GRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGI 374
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 144/318 (45%), Gaps = 24/318 (7%)
Query: 85 PNAVTFTSLIKGLCAESRIMEAAA--LFTKLRVFG---CEPNVFTYNTLINGLYRTGHTI 139
P + L + L +R A A LF ++ + PN+ TY+ +I+ R GH
Sbjct: 49 PTTSSIVDLNRALSDAARHSPAVAISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLD 108
Query: 140 VALN-LFEEMASGNGEFGV------EGFVDKAKE------LFLQMKDENINPDVVTYTSV 186
+A L + SG + + DK + +M P+V +YT +
Sbjct: 109 LAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTIL 168
Query: 187 IRGFCYANDWNEAKCLLIEMM-----DQGVQPNVVTFNVIMDELCKNGK-MDEASRLLDL 240
++G C N +A LL MM G P+VV++N +++ L + G+ +D A L D
Sbjct: 169 LKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQ 228
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M+ G+ P+ YN+++ +++A + V M G +++ L++GYC + +
Sbjct: 229 MLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGK 288
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
A+ ++ M G++PDV YNTL L + + A K+FD M + G ++ TY T
Sbjct: 289 PNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGT 348
Query: 361 FIDGLCKNSYIVEAVELF 378
+ G +V+ L
Sbjct: 349 LLHGYATEGSLVKMHHLL 366
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 115/244 (47%), Gaps = 10/244 (4%)
Query: 164 AKELFLQM---KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
A LF +M + P+++TY+ VI + A L ++ G +TF+
Sbjct: 72 AISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSP 131
Query: 221 IMDELCKNGKMDEASRL-LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM--- 276
++ LC + EA + L M +G PN F Y L+ G C R +A L +M
Sbjct: 132 LLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVA 191
Query: 277 --ESMGCTHTVFSYSILINGYCK-NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
G V SY+ +ING + ++++ A L+ +ML +G+ PDVV YN++ L +
Sbjct: 192 DDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKA 251
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
+++A + M ++G + T+ + + G C + +A+ +F+ + E D+ Y
Sbjct: 252 RAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTY 311
Query: 394 NCLI 397
N L+
Sbjct: 312 NTLM 315
>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Vitis vinifera]
Length = 835
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 198/431 (45%), Gaps = 50/431 (11%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V FN+L +N + L + + + G PD+ TYN L+N FCK+G + ++G
Sbjct: 17 VEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMG 76
Query: 77 RILRSCFTPNAVTFTSLI-----------------------------------KGLCAES 101
I PN +T+T+LI GLC
Sbjct: 77 EISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSG 136
Query: 102 RIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV---- 157
++ EA ++F ++ G PN F+Y TLI+ L++ G+ A L M F V
Sbjct: 137 KVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYT 196
Query: 158 --------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
G + A+++F + +E++ P+ VTY+++I G C D N+ + LL EM ++
Sbjct: 197 ALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEK 256
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
+ PNV+ ++ I+D K G ++EA ++ M+Q + PN FVY TL+DG+ + A
Sbjct: 257 HIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIA 316
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
+LF M+S G F +N ++ +E A L+ +M+S+G+ PD V Y ++
Sbjct: 317 LDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDG 376
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK-NSYIVEAVELFRTLRILKCEL 388
F+ + AF + EM D Y I+GL K Y E+ +R L
Sbjct: 377 FFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY--ESESFHTGMRQLGLAP 434
Query: 389 DIRAYNCLIDG 399
D +N +I+
Sbjct: 435 DSATFNTMINA 445
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 197/430 (45%), Gaps = 46/430 (10%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V + L L K + +F+ L L P+ TY+ LI+ CK+G V+ G ++L
Sbjct: 192 VVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQ 251
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ PN + ++S++ G + + EA + K+ PNVF Y TLI+G ++
Sbjct: 252 EMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKAD 311
Query: 137 HTIVALNLFEEMASGNGE---FGVEGFV---------DKAKELFLQMKDENINPDVVTYT 184
+AL+LF+EM S E F ++ FV ++A ELF M + PD V YT
Sbjct: 312 QRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYT 371
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQ----------------------------------G 210
S++ GF A ++A + EM ++ G
Sbjct: 372 SMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLG 431
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
+ P+ TFN +++ CK G + A +LL+ M G++PN+ N L+ C G + +
Sbjct: 432 LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTM 491
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
+L M MG T ++ +++ K++ + L ++ +++ G+K D+ YNTL
Sbjct: 492 DLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTF 551
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
+ + RA +F +M G+ AD TY I G C +S++ +A + + ++
Sbjct: 552 CRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNV 611
Query: 391 RAYNCLIDGL 400
YN L+ GL
Sbjct: 612 ETYNILLGGL 621
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 171/371 (46%), Gaps = 24/371 (6%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
L ++ + LFK + S GL PD Y +++ F K G+ S F + + +
Sbjct: 342 LKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFD 401
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
V + LI GL + E+ + T +R G P+ T+NT+IN + G+ AL L
Sbjct: 402 VVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLN 460
Query: 147 EMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
EM S +G++ P+ +T +++ C A + + LL +M
Sbjct: 461 EMKS----YGLK-------------------PNSITCNILVQRLCAAGEIEKTMDLLNDM 497
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+ G P T ++D K+ + D + D ++ +GV+ + YNTL+ FC G +
Sbjct: 498 LVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMI 557
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
RA +F M G + +Y+ LI+GYC + ++ A +++ +ML++G+ P+V YN L
Sbjct: 558 RRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNIL 617
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
L ++ A L ++M+ G+ + TY + G K + E V+L+ +
Sbjct: 618 LGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGF 677
Query: 387 ELDIRAYNCLI 397
R YN LI
Sbjct: 678 VPKTRTYNVLI 688
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 174/358 (48%), Gaps = 25/358 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++N+L L K Y++ S + GL PD T+N +IN +CK G + + +L
Sbjct: 402 VVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLN 460
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ PN++T L++ LCA I + L + V G P T+ +++ ++
Sbjct: 461 EMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSR 520
Query: 137 HTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKDENINPDVVTYT 184
V L++ +++ + + G + +A +F M + I D++TY
Sbjct: 521 RADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYN 580
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
++I G+C ++ +A + +M+ +GV PNV T+N+++ L + EA+ L++ M +
Sbjct: 581 ALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKER 640
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G+ PNA Y+ L+ G G + +L+ M + G +Y++LI+ + K K++ A
Sbjct: 641 GLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQA 700
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ-------VERAF-----KLFDEMQRDG 350
L EM +GI P+ Y+ L +++ + ++R++ +LF+EM G
Sbjct: 701 KELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKG 758
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 105/190 (55%)
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
++ +V FNV++D C+NG++ A LL+ M G P+ YNTLM+GFC G + AK
Sbjct: 13 IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
+L + + V +Y+ LI+ YCK++ +E AL +Y EM K + PDVV Y + L
Sbjct: 73 KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
+ +VE A +F EM+ GV + ++Y T ID L K + EA L + + D+
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192
Query: 391 RAYNCLIDGL 400
Y L+DGL
Sbjct: 193 VVYTALMDGL 202
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 109/224 (48%)
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
I V + +I G+C + + A LL M +G P++VT+N +M+ CK G + A
Sbjct: 13 IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+L+ + + + PN Y TL+D +C + + A ++ M V +Y+ ++NG
Sbjct: 73 KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
CK+ ++E A S++ EM G+ P+ Y TL LF+ V AF L M G+ D
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
Y +DGL K A ++F+ L + Y+ LIDG
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDG 236
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 122/296 (41%), Gaps = 60/296 (20%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ + ML M P P +L +K++ D +L + +L G+ DL TYN LI+ F
Sbjct: 493 LLNDMLVMGFHPTPTTHKAVLDAS-SKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTF 551
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C++G + +V ++ + +T+ +LI G C S + +A A+ +++ G PNV
Sbjct: 552 CRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNV 611
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEM---------------ASGNGEFG----------- 156
TYN L+ GL A L +M SG+G+ G
Sbjct: 612 ETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCE 671
Query: 157 --VEGFVDK-------------------AKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
+GFV K AKEL +M+ I P+ TY +I G+ +
Sbjct: 672 MITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSK 731
Query: 196 W------------NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
EAK L EM ++G P T I L K GK +A R+L+
Sbjct: 732 QPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILN 787
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 13/160 (8%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F + ML SP V ++NIL G L+ + L ++ GL P+ TY+IL++
Sbjct: 596 FAVHSQMLTEGVSPN-VETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVS 654
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
K+G + + ++ F P T+ LI ++ +A L +++V G P
Sbjct: 655 GHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPP 714
Query: 121 NVFTYNTLINGLY------------RTGHTIVALNLFEEM 148
N TY+ LI G Y + + A LFEEM
Sbjct: 715 NSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEM 754
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 183/388 (47%), Gaps = 25/388 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+N + + K + L L + +G L T+ ILI+ FCK G++
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + V +TSLI+G C + ALF ++ G P TYNTLI G +
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G + +A E+F M + + P+V TYT +I G C
Sbjct: 295 LGQ-----------------------LKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVG 331
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EA LL M+++ +PN VT+N+I+++LCK+G + +A +++LM + RP+ YN
Sbjct: 332 KTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYN 391
Query: 255 TLMDGFCLTGRVNRAKELFVSM--ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
L+ G C G ++ A +L M +S V SY+ LI+G CK + AL +Y ++
Sbjct: 392 ILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLV 451
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
K D V N L + V +A +L+ ++ + ++ TY IDG CK +
Sbjct: 452 EKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLN 511
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
A L +R+ + + + YNCL+ L
Sbjct: 512 VAKGLLCKMRVSELQPSVFDYNCLLSSL 539
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 185/376 (49%), Gaps = 16/376 (4%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
N L L ++++++ S ++++ T F + + + L+ C+ +M + F VL +L+
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
F N L+KGLC +A +L ++R P+VF+YNT+I G
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 141 ALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
AL L EM G+G F G +D+A +MK + D+V YTS+I
Sbjct: 196 ALELANEM-KGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLI 254
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
RGFC + + K L E++++G P +T+N ++ CK G++ EAS + + MI+ GVR
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
PN + Y L+DG C G+ A +L M +Y+I+IN CK+ + A+ +
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG--VAADTWTYRTFIDGL 365
M + +PD + YN L L ++ A KL M +D D +Y I GL
Sbjct: 375 VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGL 434
Query: 366 CKNSYIVEAVELFRTL 381
CK + + +A++++ L
Sbjct: 435 CKENRLHQALDIYDLL 450
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 182/397 (45%), Gaps = 14/397 (3%)
Query: 16 PVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVL 75
+ ++ IL K D + K + GL DL Y LI FC G + G +
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 76 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRT 135
+L +P A+T+ +LI+G C ++ EA+ +F + G PNV+TY LI+GL
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330
Query: 136 GHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTY 183
G T AL L M + E +G V A E+ MK PD +TY
Sbjct: 331 GKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITY 390
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQG--VQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
++ G C D +EA LL M+ P+V+++N ++ LCK ++ +A + DL+
Sbjct: 391 NILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLL 450
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++ + N L++ G VN+A EL+ + +Y+ +I+G+CK +
Sbjct: 451 VEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGML 510
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A L +M ++P V YN L L + +++A++LF+EMQRD D ++
Sbjct: 511 NVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIM 570
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
IDG K I A L + D+ Y+ LI+
Sbjct: 571 IDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 196/395 (49%), Gaps = 17/395 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF++M+ R P V ++ L L L L + P+ TYNI+IN
Sbjct: 304 IFEFMIE-RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKL 362
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFG-CEP 120
CK G V+ ++ + + P+ +T+ L+ GLCA+ + EA+ L + L+ +P
Sbjct: 363 CKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDP 422
Query: 121 NVFTYNTLINGLYRTGHTIVALNLF----EEMASGN--------GEFGVEGFVDKAKELF 168
+V +YN LI+GL + AL+++ E++ +G+ G V+KA EL+
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELW 482
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
Q+ D I + TYT++I GFC N AK LL +M +QP+V +N ++ LCK
Sbjct: 483 KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKE 542
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G +D+A RL + M + P+ +N ++DG G + A+ L V M G + +F+Y
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTY 602
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
S LIN + K ++ A+S + +M+ G +PD I +++ + ++ +L ++
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVD 662
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
+ D T +D +C +S ++ + R LR+
Sbjct: 663 KDIVLDKELTCTVMDYMCNSSANMDLAK--RLLRV 695
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 175/380 (46%), Gaps = 30/380 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD +L R P ++N L K +F+ + G+ P++YTY LI+
Sbjct: 269 LFDEVLE-RGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +G+ +L ++ PNAVT+ +I LC + + +A + ++ P+
Sbjct: 328 CGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDEN-INPDVV 181
TYN L+ GL G + +K L+L +KD + +PDV+
Sbjct: 388 ITYNILLGGLCAKGD----------------------LDEASKLLYLMLKDSSYTDPDVI 425
Query: 182 TYTSVIRGFCYANDWNEA---KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
+Y ++I G C N ++A LL+E + G + VT N++++ K G +++A L
Sbjct: 426 SYNALIHGLCKENRLHQALDIYDLLVEKLGAG---DRVTTNILLNSTLKAGDVNKAMELW 482
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
+ + N+ Y ++DGFC TG +N AK L M +VF Y+ L++ CK
Sbjct: 483 KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKE 542
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
++ A L+ EM PDVV +N + + ++ A L M R G++ D +TY
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTY 602
Query: 359 RTFIDGLCKNSYIVEAVELF 378
I+ K Y+ EA+ F
Sbjct: 603 SKLINRFLKLGYLDEAISFF 622
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 105/195 (53%)
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M+ +G NV N+++ LC+N + +A LL M + + P+ F YNT++ GFC
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
+ +A EL M+ GC+ ++ ++ ILI+ +CK +++ A+ EM G++ D+V+Y +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L + +++R LFDE+ G + TY T I G CK + EA E+F +
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 386 CELDIRAYNCLIDGL 400
++ Y LIDGL
Sbjct: 313 VRPNVYTYTGLIDGL 327
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%)
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
+ F+ + L+ +++ E A S Y +ML + V + L ++ + AF
Sbjct: 69 SSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFG 128
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ M + G A + + + + GLC+N +AV L R +R D+ +YN +I G
Sbjct: 129 VLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRG 186
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 194/388 (50%), Gaps = 30/388 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N + L + +++ + G P+++TYN+L+ CK +V +
Sbjct: 143 PSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKL 202
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + PNAV++T++I +C + E L + EP V YN LINGL +
Sbjct: 203 LVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERF-----EPVVSVYNALINGLCK 257
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
E +G V EL +M ++ I+P+V++Y+++I +
Sbjct: 258 -------------------ERDYKGGV----ELMSEMVEKGISPNVISYSTLINELSNSG 294
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ-IGVRPNAFVY 253
A LL +M+ +G PN+ T + ++ G +A + + MI+ G++PN Y
Sbjct: 295 QIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAY 354
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
NTL+ GFC G +++A +F+ ME +GC+ + +Y LING+ K +EGA+ ++ +ML+
Sbjct: 355 NTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLT 414
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
G P+VV+Y ++ L + + A L + M ++ A T+ FI GLC +
Sbjct: 415 SGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDW 474
Query: 374 AVELFRTL-RILKCELDIRAYNCLIDGL 400
A ++FR + + +C +I YN L+DGL
Sbjct: 475 AEKVFRQMEQQYRCPPNIVTYNELLDGL 502
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 174/367 (47%), Gaps = 21/367 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N+L L KN D L +++ G P+ +Y +I+ C++G V G
Sbjct: 178 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEG--- 234
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R L F P + +LI GLC E L +++ G PNV +Y+TLIN L
Sbjct: 235 --RQLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSN 292
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQM-KDENINPDV 180
+G +A +L +M G F V G A +++ QM + + P+V
Sbjct: 293 SGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCF-VRGTTFDALDMWNQMIRGFGLQPNV 351
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
V Y ++++GFC + ++A + + M + G PN+ T+ +++ K G ++ A + +
Sbjct: 352 VAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNK 411
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M+ G PN VY ++++ C + A+ L M C +V +++ I G C
Sbjct: 412 MLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGR 471
Query: 301 IEGALSLYGEMLSK-GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++ A ++ +M + P++V YN L L + +++E A+ L E+ GV T TY
Sbjct: 472 LDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYN 531
Query: 360 TFIDGLC 366
T + G C
Sbjct: 532 TLLHGSC 538
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N L L K + Y + L + G+ P++ +Y+ LIN G++ F +
Sbjct: 243 PVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSL 302
Query: 75 LGRILR---------------SCFT---------------------PNAVTFTSLIKGLC 98
L ++L+ CF PN V + +L++G C
Sbjct: 303 LAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFC 362
Query: 99 AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE 158
+ I +A ++F + GC PN+ TY +LING + G A+ ++ +M + V
Sbjct: 363 SHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVV 422
Query: 159 GFVD------------KAKELFLQMKDENINPDVVTYTSVIRGFCYAN--DWNEAKCLLI 204
+ +A+ L M EN P V T+ + I+G C A DW E +
Sbjct: 423 VYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEK---VF 479
Query: 205 EMMDQGVQ--PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
M+Q + PN+VT+N ++D L K +++EA L + GV + YNTL+ G C
Sbjct: 480 RQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCN 539
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG---IKPD 319
G A +L M G + + +++I YCK + E A+ + +++S G +PD
Sbjct: 540 AGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQML-DLVSCGRRKWRPD 598
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEM 346
V+ Y + L + E LF+ M
Sbjct: 599 VISYTNVIWGLCRSNCREDGVILFERM 625
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 142/307 (46%), Gaps = 26/307 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L + + D +S+F + G P++ TY LIN F K G + +
Sbjct: 349 PNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYI 408
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++L S PN V +TS+++ LC S+ EA +L + C P+V T+N I GL
Sbjct: 409 WNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCD 468
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDE-NINPDVVTYTSVIRGFCYA 193
G +D A+++F QM+ + P++VTY ++ G A
Sbjct: 469 AGR-----------------------LDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKA 505
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
N EA L E+ +GV+ + T+N ++ C G A +L+ M+ G P+
Sbjct: 506 NRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITM 565
Query: 254 NTLMDGFCLTGRVNRAKELF--VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
N ++ +C G+ RA ++ VS V SY+ +I G C++ E + L+ M
Sbjct: 566 NMIILAYCKQGKAERAVQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERM 625
Query: 312 LSKGIKP 318
+S+ I P
Sbjct: 626 ISERIIP 632
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 142/362 (39%), Gaps = 72/362 (19%)
Query: 104 MEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDK 163
++ +A+ +LR C P + I HT + FE M + ++G VD
Sbjct: 40 IKESAVLKRLRQESCVPLALHFFKSIANSNLFKHTPLT---FEVMIR---KLAMDGQVDS 93
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
+ L QMK + + + SVI + A + + + G P+V +N ++D
Sbjct: 94 VQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLD 153
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
L ++ + M + G PN F YN L+ C +V+ AK+L V M + GC
Sbjct: 154 TLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCP 213
Query: 284 TVFSYSI------------------------------LINGYCKNKEIEGALSLYGEMLS 313
SY+ LING CK ++ +G + L EM+
Sbjct: 214 NAVSYTTVISSMCEVGMVKEGRQLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVE 273
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV---------------------- 351
KGI P+V+ Y+TL L Q+E AF L +M + G
Sbjct: 274 KGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFD 333
Query: 352 AADTW--------------TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
A D W Y T + G C + I +AV +F + + C +IR Y LI
Sbjct: 334 ALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLI 393
Query: 398 DG 399
+G
Sbjct: 394 NG 395
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 5/185 (2%)
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
+TF V++ +L +G++D LL M G + ++ +++ + G RA E+F
Sbjct: 76 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 135
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
++ GC +V Y+ +++ I+ +Y +M G +P+V YN L L + ++
Sbjct: 136 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 195
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
V+ A KL EM G + +Y T I +C+ + E +L E + YN
Sbjct: 196 VDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERF-----EPVVSVYNA 250
Query: 396 LIDGL 400
LI+GL
Sbjct: 251 LINGL 255
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 8/153 (5%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M PP + ++N L LAK + L + + G+ TYN L++
Sbjct: 478 VFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGS 537
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC---- 118
C G ++G+++ + +P+ +T +I C + + A + L + C
Sbjct: 538 CNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQM---LDLVSCGRRK 594
Query: 119 -EPNVFTYNTLINGLYRTGHTIVALNLFEEMAS 150
P+V +Y +I GL R+ + LFE M S
Sbjct: 595 WRPDVISYTNVIWGLCRSNCREDGVILFERMIS 627
>gi|414882131|tpg|DAA59262.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1604
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/369 (31%), Positives = 178/369 (48%), Gaps = 17/369 (4%)
Query: 26 CLAKNKHYDTV----LSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRS 81
C A++ DT LS F+ + S G+ PD+ N ++ R V +L
Sbjct: 1054 CKARDATLDTCSTLCLSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLEL 1113
Query: 82 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGCEPNVFTYNTLINGLYRTGHTI 139
P+ VT+ +L+ E R + A L ++ R GC PN TYN +I GL R G
Sbjct: 1114 GIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLE 1173
Query: 140 VALNLFEEM--ASGNGEFG---------VEGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
A L E M + F G V K +L L+M++E I P VVTY ++I
Sbjct: 1174 EAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIH 1233
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
G + A+ EM G+ P+V+T+N +++ CK G + EA L + + G+ P
Sbjct: 1234 GLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAP 1293
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
YN L+DG+C G + A+ L M GC V +Y+IL+ G + + A +
Sbjct: 1294 TVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFF 1353
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
EMLSKG++PD YNT + + RAF+L + + +G+++DT TY I GLCK
Sbjct: 1354 DEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKT 1413
Query: 369 SYIVEAVEL 377
+ +A EL
Sbjct: 1414 GNLKDAKEL 1422
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 120/221 (54%), Gaps = 10/221 (4%)
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ--PNVVTFNVIMDELCK 227
+M + I P +VTY +++ F ++ LL EM +G PN VT+NV++ L +
Sbjct: 1109 EMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTR 1168
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
G ++EA+ L++ M ++ + ++F YN L+ G G V + +L + ME+ G TV +
Sbjct: 1169 KGDLEEAAELVEGM-RLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVT 1227
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y+ +I+G ++ +E A + EM + G+ PDV+ YN+L + ++ A LF +++
Sbjct: 1228 YNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLR 1287
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
R G+A TY IDG C+ + EA RILK E+
Sbjct: 1288 RAGLAPTVLTYNILIDGYCRLGDLEEA-------RILKEEM 1321
>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 176/376 (46%), Gaps = 12/376 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +FN L + +T L LF + S G PD+ +Y I+I+ C R V
Sbjct: 117 PDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKV 176
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R++ +P+ +L+ GLC+ R+ A L + G + N YN LI+G R
Sbjct: 177 WRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCR 236
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G A+ + M+ + EG VD+A L M+ + PD+ +
Sbjct: 237 MGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYS 296
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++GFC AN + A +++E M +VV++N ++ CK + + L + M
Sbjct: 297 YNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMC 356
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+RP+ +N L+D F G + K+L M M Y+ +++ CKN +++
Sbjct: 357 GKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVD 416
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A S++ +M+ G+ PDV+ YN L + +V A LFDEMQ G+ D TY+ +
Sbjct: 417 VAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIV 476
Query: 363 DGLCKNSYIVEAVELF 378
GL + I A ++
Sbjct: 477 GGLIRGKKISLACRVW 492
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 171/363 (47%), Gaps = 12/363 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+ I+ L K +D +++RL GL PD L+ C GRV + +
Sbjct: 152 PDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYEL 211
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ +++ N++ + +LI G C R+ +A + + GC P++ TYN L+N
Sbjct: 212 VVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCE 271
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
G A+ L E M E F VD+A + ++ DVV+
Sbjct: 272 EGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVS 331
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +VI FC A + L EM +G++P++VTFN+++D + G +LLD M
Sbjct: 332 YNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMT 391
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
++ V P+ Y ++D C G+V+ A +F M G V SY+ L+NG+CK +
Sbjct: 392 KMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVM 451
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ L+ EM SKG+ PD V Y + L ++ A +++D+M G + T +
Sbjct: 452 DAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLV 511
Query: 363 DGL 365
+ +
Sbjct: 512 NAI 514
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 169/364 (46%), Gaps = 23/364 (6%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 95
+ SL ++S G PD++ +N +N C+ R+ + + P+ V++T +I
Sbjct: 103 IHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIID 162
Query: 96 GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEF 155
LC R EAA ++ +L G P+ L+ GL SG
Sbjct: 163 ALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGL----------------CSG---- 202
Query: 156 GVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNV 215
G VD A EL + + + + + Y ++I GFC ++A + M G P++
Sbjct: 203 ---GRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDL 259
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
VT+N++++ C+ G +DEA RL++ M + GV P+ + YN L+ GFC V+RA + V
Sbjct: 260 VTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVE 319
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
V SY+ +I +CK + L+ EM KGI+PD+V +N L
Sbjct: 320 RMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGS 379
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
KL DEM + V D Y +D LCKN + A +FR + D+ +YN
Sbjct: 380 THVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNA 439
Query: 396 LIDG 399
L++G
Sbjct: 440 LLNG 443
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 163/351 (46%), Gaps = 31/351 (8%)
Query: 55 YNILINCFCKMGRV--SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA---AL 109
YN I + R+ +H + I R F+ T++ I LC+ + +L
Sbjct: 48 YNRFIGVLLRHSRLHLAHHYYRRHVIPRG-FSLLPFTYSRFISALCSAPNNINLPLIHSL 106
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL 169
+ G P+++ +NT +N L R AL LF M S
Sbjct: 107 LLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPS------------------- 147
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+ +PDVV+YT +I C A ++EA + ++D+G+ P+ ++ LC G
Sbjct: 148 ----KGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGG 203
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
++D A L+ +I+ GV+ N+ VYN L+DGFC GRV++A ++ M GC + +Y+
Sbjct: 204 RVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYN 263
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA-FKLFDEMQR 348
IL+N C+ ++ A+ L M G++PD+ YN L + + V+RA + + MQ
Sbjct: 264 ILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQT 323
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G+ D +Y T I CK + ELF + D+ +N LID
Sbjct: 324 KGM-CDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDA 373
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M MR P + + + L KN D S+F+ + G+ PD+ +YN L+N F
Sbjct: 386 LLDEMTKMRVLPDCIF-YTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGF 444
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK RV + + P+ VT+ ++ GL +I A ++ ++ G N
Sbjct: 445 CKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNR 504
Query: 123 FTYNTLINGLYRTGHT 138
TL+N + + T
Sbjct: 505 HLSETLVNAIQSSDGT 520
>gi|302143623|emb|CBI22376.3| unnamed protein product [Vitis vinifera]
Length = 554
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 173/372 (46%), Gaps = 25/372 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N+L G L K T + L ++ +G PD TYN ++ C G
Sbjct: 198 PDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQAIGF 257
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
LR +T+T LI+ +C ++A + + + GC P++ TYN+L+N +
Sbjct: 258 WKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCK 317
Query: 135 TG-HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
G + AL ++ ++ G G P+ VTY +++ C
Sbjct: 318 QGKYEDTALIIYNLLSHGMG------------------------PNTVTYNTLLHSLCTH 353
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
W+E +L+ M P VVT+N++++ LCK G +D A D M+ P+ Y
Sbjct: 354 GYWDEVDEILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITY 413
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
NTL+ C G V+ A L S+ C+ + +Y+I+I+G K +E A+ LYGEM+
Sbjct: 414 NTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIE 473
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+G PD + + TLF LF + VE A + EM + +R I GLC I E
Sbjct: 474 RGFAPDDITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCAAGMIEE 533
Query: 374 AVELFRTLRILK 385
A +L + L LK
Sbjct: 534 ANQLHQKLTELK 545
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 161/340 (47%), Gaps = 12/340 (3%)
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 110
D T N ++ C G++ + ++ + R P + +LI+GL A +
Sbjct: 129 DEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVL 188
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA-SGNGEFGV-----------E 158
+ + G P++ TYN L+ GL + G A+ L +EM+ SG +
Sbjct: 189 KIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDH 248
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
G D+A + + ++TYT +I C +A +L +M +G P++VT+
Sbjct: 249 GGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTY 308
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
N +++ CK GK ++ + ++ ++ G+ PN YNTL+ C G + E+ + M +
Sbjct: 309 NSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNT 368
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
TV +Y+ILING CK ++ A++ + +M+S PD++ YNTL L + V+
Sbjct: 369 TSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDE 428
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
A L + + TY IDGL K + +A+EL+
Sbjct: 429 ALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELY 468
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 129/298 (43%), Gaps = 23/298 (7%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P + ++ +L + K+ + + + + G +PD+ TYN L+N CK G+ +
Sbjct: 267 PAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDTAL 326
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
++ +L PN VT+ +L+ LC E + + P V TYN LINGL
Sbjct: 327 IIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILINGLC 386
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ G +D+A F QM N PD++TY +++ C
Sbjct: 387 KY-----------------------GLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKE 423
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+EA LL + D P ++T+N+++D L K G M++A L MI+ G P+ +
Sbjct: 424 GMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITH 483
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
TL G V A + M ++ +I+G C IE A L+ ++
Sbjct: 484 RTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCAAGMIEEANQLHQKL 541
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 110/243 (45%)
Query: 158 EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
+G + A L M N P + ++IRG A +L M+ G P+++T
Sbjct: 143 KGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIMVMSGGIPDIIT 202
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
+N+++ LCK G + A LLD M G P+A YNT++ G ++A +
Sbjct: 203 YNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQAIGFWKDQL 262
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
GC + +Y++LI CK+ A+ + +M +G PD+V YN+L + + E
Sbjct: 263 RKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYE 322
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ + G+ +T TY T + LC + Y E E+ + + YN LI
Sbjct: 323 DTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILI 382
Query: 398 DGL 400
+GL
Sbjct: 383 NGL 385
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 106/232 (45%), Gaps = 23/232 (9%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L L + ++D V + +N+T P + TYNILIN CK G +
Sbjct: 338 PNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAINF 397
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ P+ +T+ +L+ LC E + EA L L C P + TYN +I+GL +
Sbjct: 398 FDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAK 457
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+G ++KA EL+ +M + PD +T+ ++ G +
Sbjct: 458 -----------------------KGCMEKAMELYGEMIERGFAPDDITHRTLFWGLFRLD 494
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
+A +L EM + + F ++ LC G ++EA++L + ++ V
Sbjct: 495 LVEDALVILKEMNKRNQRIKNSAFRFVIHGLCAAGMIEEANQLHQKLTELKV 546
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++N PP V ++NIL L K D ++ F ++ S PD+ TYN L+ CK G
Sbjct: 365 IMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEG 424
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
V +L + + +P +T+ +I GL + + +A L+ ++ G P+ T+
Sbjct: 425 MVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHR 484
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF 160
TL GL+R AL + +EM N F
Sbjct: 485 TLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAF 518
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 188/398 (47%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S + + L K H D L L G+ P+L+ N LI+ CK R +
Sbjct: 298 PSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERL 357
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ PN VT+ LI LC + +A +F ++R G V+ YN+LING +
Sbjct: 358 FRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQ 417
Query: 135 TGHTIVALNLFEEM-----ASGNGEFGV-------EGFVDKAKELFLQMKDENINPDVVT 182
+ A L EM A + +G + A EL +M ++ +V T
Sbjct: 418 HDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYT 477
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+T++I GFC + +EA L +M+D V PN VTFNV+++ C+ G + +A +L D M+
Sbjct: 478 FTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMV 537
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ P+ + Y +L+ CLT +AKE +E+ FS + L+ G+CK +
Sbjct: 538 DRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLT 597
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
++ EM ++G+K D++ + + ++H E+ LF EM+ GV D + I
Sbjct: 598 ETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMI 657
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D K IV+A+ + + C ++ Y LI+ L
Sbjct: 658 DVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHL 695
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 187/396 (47%), Gaps = 12/396 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + N L L K++ + LF+ + + GL P+ TY ILI+ CK G + +
Sbjct: 333 PNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCM 392
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R+ + SLI G C +A L ++ G P+ +Y+ LI GL R
Sbjct: 393 FDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCR 452
Query: 135 TGHTIVALNLFEEMA----SGN--------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G A+ L EMA SGN F +G +D+A LF +M D ++ P+ VT
Sbjct: 453 KGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVT 512
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ +I G+C + +A L +M+D+G+ P+ T+ ++ LC +A +D +
Sbjct: 513 FNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLE 572
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
V N+F TLM GFC GR+ ++ M + G + S+++++ K + E
Sbjct: 573 NNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGE 632
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
L+ EM KG+KPD V + + V + + +A +D+M DG + + TY I
Sbjct: 633 KISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLI 692
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
+ LCK+ Y+ A L + + + + YNC +D
Sbjct: 693 NHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLD 728
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 185/390 (47%), Gaps = 12/390 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+N+L L +N + + + G+ D TY L+ FC+ + + +L
Sbjct: 233 YNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDML 292
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
F P+ + + ++ GL I +A L L G PN+F N LI+ L +
Sbjct: 293 SLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFR 352
Query: 140 VALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
A LF MA+ E G +D A +F +M+++ I V Y S+I
Sbjct: 353 EAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLI 412
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
G+C +++++A+ LL EM+++G+ P+ +++ ++ LC+ G + A L M + GV
Sbjct: 413 NGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVS 472
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
N + + TL+ GFC G ++ A LF M +++++I GYC+ + A L
Sbjct: 473 GNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQL 532
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
Y +M+ +G+ PD Y +L VL +A + D+++ + V ++++ T + G CK
Sbjct: 533 YDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCK 592
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ E ++ +R +LD+ ++ ++
Sbjct: 593 EGRLTETYHIWDEMRARGVKLDLISFTVIV 622
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 178/370 (48%), Gaps = 13/370 (3%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
ILF L K + + LF + D Y Y I +C++ + +L R+
Sbjct: 165 QILFA-LIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMES 223
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
+AV + L+ GLC +R++EA + + G + TY TL+ G RT +
Sbjct: 224 KGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEM 283
Query: 141 ALNLFEEMAS-------GNGEFGVEGF-----VDKAKELFLQMKDENINPDVVTYTSVIR 188
AL + ++M S + F V+G +DKA L + + + P++ ++I
Sbjct: 284 ALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALID 343
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
C + EA+ L M ++G++PN VT+ +++ LCK G MD+A + D M + G+R
Sbjct: 344 KLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRV 403
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
+ YN+L++G+C ++A+ L M G + SYS LI G C+ ++ A+ L+
Sbjct: 404 TVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELH 463
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
EM G+ +V + TL + ++ A +LFD+M V + T+ I+G C+
Sbjct: 464 REMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRV 523
Query: 369 SYIVEAVELF 378
+ +A +L+
Sbjct: 524 GNVRKAFQLY 533
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 171/358 (47%), Gaps = 13/358 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +F L K+ + D LF ++ + + P+ T+N++I +C++G V F +
Sbjct: 475 VYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYD 534
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+++ TP+ T+ SLI LC M+A L N F+ TL+ G + G
Sbjct: 535 QMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEG 594
Query: 137 HTIVALNLFEEMASGNGEFGVEGFV------------DKAKELFLQMKDENINPDVVTYT 184
++++EM + + + F +K LF +MK++ + PD V +T
Sbjct: 595 RLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHT 654
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+I + +A +M+ G PNVVT+ V+++ LCK+G + A L + M+
Sbjct: 655 CMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVG 714
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
PN+F YN +D G + +AK L ++ GC +++ LI G+CK +I+GA
Sbjct: 715 RFLPNSFTYNCFLDFLANEGELEKAKVLHATILE-GCLANTVTFNTLIKGFCKAGQIQGA 773
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
+ L G PD + Y+T+ L ++ + +AF+L++EM G+ D Y I
Sbjct: 774 IDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILI 831
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 120/476 (25%), Positives = 193/476 (40%), Gaps = 82/476 (17%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M N R P ++ IL L K D L +F R+ G+ +Y YN LIN +
Sbjct: 357 LFRGMAN-RGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGY 415
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ +L ++ P+A +++ LI GLC + + A L ++ G NV
Sbjct: 416 CQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNV 475
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNG-------EFGVEGF-----VDKAKELFLQ 170
+T+ TLI+G + G+ A LF++M + +EG+ V KA +L+ Q
Sbjct: 476 YTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQ 535
Query: 171 MKDENINPDVVTYTSVIR-----------------------------------GFCYAND 195
M D + PD TY S+I GFC
Sbjct: 536 MVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGR 595
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
E + EM +GV+ ++++F VI+ K ++ S L M + GV+P+ +
Sbjct: 596 LTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTC 655
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS-- 313
++D + +A + M + GC+ V +Y++LIN CK+ + A L EML
Sbjct: 656 MIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGR 715
Query: 314 --------------------------------KGIKPDVVIYNTLFVVLFEIHQVERAFK 341
+G + V +NTL + Q++ A
Sbjct: 716 FLPNSFTYNCFLDFLANEGELEKAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAID 775
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
L G D +Y T I+ LCK I +A +L+ + + DI AYN LI
Sbjct: 776 LMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILI 831
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 162/390 (41%), Gaps = 58/390 (14%)
Query: 45 STGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 104
S+G+ YT + ++ K+ + + + +++ F + +T+ I+ C +
Sbjct: 153 SSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLD 212
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKA 164
A L T++ G + + YN L+ GL R + A+
Sbjct: 213 GARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAV---------------------- 250
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM----------------- 207
E+ M + I D VTY +++ GFC + A + +M+
Sbjct: 251 -EVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDG 309
Query: 208 ------------------DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
+ G+ PN+ N ++D+LCK+ + EA RL M G+ PN
Sbjct: 310 LRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPN 369
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
Y L+ C G ++ A +F M G TV+ Y+ LINGYC++ A L
Sbjct: 370 EVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLN 429
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
EM+ KG+ P Y+ L L + A +L EM R+GV+ + +T+ T I G CK+
Sbjct: 430 EMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDG 489
Query: 370 YIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ EA LF + + +N +I+G
Sbjct: 490 NMDEAARLFDKMIDSSVVPNEVTFNVMIEG 519
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 94/214 (43%), Gaps = 6/214 (2%)
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
IR F A D L EM+ + + + C+ +D A LL M GV
Sbjct: 173 IRQFALARD------LFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGV 226
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+ +A YN LM G C RV A E+ SM G +Y L+ G+C+ +E+E AL
Sbjct: 227 KGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALE 286
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
+ +MLS P V + + L + +++AF+L + G+ + + ID LC
Sbjct: 287 MTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLC 346
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
K+ EA LFR + E + Y LI L
Sbjct: 347 KDRRFREAERLFRGMANRGLEPNEVTYAILIHSL 380
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 86/194 (44%)
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+ G+ T + I+ L K + A L D M+Q + +VY + +C +
Sbjct: 152 LSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNL 211
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ A+ L MES G + Y++L+ G C+N + A+ + M+ +GI D V Y TL
Sbjct: 212 DGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTL 271
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
++E A ++ D+M + +DGL K +I +A L L L
Sbjct: 272 VYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGM 331
Query: 387 ELDIRAYNCLIDGL 400
++ A N LID L
Sbjct: 332 VPNLFACNALIDKL 345
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 80/171 (46%)
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+ +A+ +L L + G+ + + ++ + A++LF M + Y+
Sbjct: 140 RARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYT 199
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
I YC+ + ++GA L M SKG+K V YN L L ++V A ++ + M
Sbjct: 200 AGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVER 259
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G+ AD TYRT + G C+ + A+E+ + L + + + ++DGL
Sbjct: 260 GIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGL 310
>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
Length = 882
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 198/431 (45%), Gaps = 50/431 (11%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V FN+L +N + L + + + G PD+ TYN L+N FCK+G + ++G
Sbjct: 17 VEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMG 76
Query: 77 RILRSCFTPNAVTFTSLI-----------------------------------KGLCAES 101
I PN +T+T+LI GLC
Sbjct: 77 EISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSG 136
Query: 102 RIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV---- 157
++ EA ++F ++ G PN F+Y TLI+ L++ G+ A L M F V
Sbjct: 137 KVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYT 196
Query: 158 --------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
G + A+++F + +E++ P+ VTY+++I G C D N+ + LL EM ++
Sbjct: 197 ALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEK 256
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
+ PNV+ ++ I+D K G ++EA ++ M+Q + PN FVY TL+DG+ + A
Sbjct: 257 HIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIA 316
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
+LF M+S G F +N ++ +E A L+ +M+S+G+ PD V Y ++
Sbjct: 317 LDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDG 376
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK-NSYIVEAVELFRTLRILKCEL 388
F+ + AF + EM D Y I+GL K Y E+ +R L
Sbjct: 377 FFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY--ESESFHTGMRQLGLAP 434
Query: 389 DIRAYNCLIDG 399
D +N +I+
Sbjct: 435 DSATFNTMINA 445
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 196/430 (45%), Gaps = 46/430 (10%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V + L L K + +F+ L L P+ TY+ LI+ CK+G V+ G ++L
Sbjct: 192 VVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQ 251
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ PN + ++S++ G + + EA + K+ PNVF Y TLI+G ++
Sbjct: 252 EMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKAD 311
Query: 137 HTIVALNLFEEMASGNGE---FGVEGFV---------DKAKELFLQMKDENINPDVVTYT 184
+AL+LF+EM S E F ++ FV ++A ELF M + PD V YT
Sbjct: 312 QRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYT 371
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQ----------------------------------G 210
S++ GF A ++A + EM ++ G
Sbjct: 372 SMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLG 431
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
+ P+ TFN +++ CK G + A +LL+ M G++PN+ N L+ C G + +
Sbjct: 432 LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTM 491
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
+L M MG T ++ +++ K++ + L + +++ G+K D+ YNTL
Sbjct: 492 DLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTF 551
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
+ + RA +F +M G+ AD TY I G C +S++ +A + + ++
Sbjct: 552 CRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNV 611
Query: 391 RAYNCLIDGL 400
YN L+ GL
Sbjct: 612 ETYNILLGGL 621
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 170/371 (45%), Gaps = 24/371 (6%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
L ++ + LFK + S GL PD Y +++ F K G+ S F + + +
Sbjct: 342 LKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFD 401
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
V + LI GL + E+ + T +R G P+ T+NT+IN + G+ AL L
Sbjct: 402 VVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLN 460
Query: 147 EMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
EM S +G++ P+ +T +++ C A + + LL +M
Sbjct: 461 EMKS----YGLK-------------------PNSITCNILVQRLCAAGEIEKTMDLLNDM 497
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+ G P T ++D K+ + D D ++ +GV+ + YNTL+ FC G +
Sbjct: 498 LVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMI 557
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
RA +F M G + +Y+ LI+GYC + ++ A +++ +ML++G+ P+V YN L
Sbjct: 558 RRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNIL 617
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
L ++ A L ++M+ G+ + TY + G K + E V+L+ +
Sbjct: 618 LGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGF 677
Query: 387 ELDIRAYNCLI 397
R YN LI
Sbjct: 678 VPKTRTYNVLI 688
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 173/358 (48%), Gaps = 25/358 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++N+L L K Y++ S + GL PD T+N +IN +CK G + + +L
Sbjct: 402 VVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLN 460
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ PN++T L++ LCA I + L + V G P T+ +++ ++
Sbjct: 461 EMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSR 520
Query: 137 HTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKDENINPDVVTYT 184
V L+ +++ + + G + +A +F M + I D++TY
Sbjct: 521 RADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYN 580
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
++I G+C ++ +A + +M+ +GV PNV T+N+++ L + EA+ L++ M +
Sbjct: 581 ALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKER 640
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G+ PNA Y+ L+ G G + +L+ M + G +Y++LI+ + K K++ A
Sbjct: 641 GLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQA 700
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ-------VERAF-----KLFDEMQRDG 350
L EM +GI P+ Y+ L +++ + ++R++ +LF+EM G
Sbjct: 701 KELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKG 758
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 105/190 (55%)
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
++ +V FNV++D C+NG++ A LL+ M G P+ YNTLM+GFC G + AK
Sbjct: 13 IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
+L + + V +Y+ LI+ YCK++ +E AL +Y EM K + PDVV Y + L
Sbjct: 73 KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
+ +VE A +F EM+ GV + ++Y T ID L K + EA L + + D+
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192
Query: 391 RAYNCLIDGL 400
Y L+DGL
Sbjct: 193 VVYTALMDGL 202
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 109/224 (48%)
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
I V + +I G+C + + A LL M +G P++VT+N +M+ CK G + A
Sbjct: 13 IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+L+ + + + PN Y TL+D +C + + A ++ M V +Y+ ++NG
Sbjct: 73 KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
CK+ ++E A S++ EM G+ P+ Y TL LF+ V AF L M G+ D
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
Y +DGL K A ++F+ L + Y+ LIDG
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDG 236
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 121/296 (40%), Gaps = 60/296 (20%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ + ML M P P +L +K++ D +L +L G+ DL TYN LI+ F
Sbjct: 493 LLNDMLVMGFHPTPTTHKAVLDAS-SKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTF 551
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C++G + +V ++ + +T+ +LI G C S + +A A+ +++ G PNV
Sbjct: 552 CRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNV 611
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEM---------------ASGNGEFG----------- 156
TYN L+ GL A L +M SG+G+ G
Sbjct: 612 ETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCE 671
Query: 157 --VEGFVDK-------------------AKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
+GFV K AKEL +M+ I P+ TY +I G+ +
Sbjct: 672 MITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSK 731
Query: 196 W------------NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
EAK L EM ++G P T I L K GK +A R+L+
Sbjct: 732 QPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILN 787
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 13/160 (8%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F + ML SP V ++NIL G L+ + L ++ GL P+ TY+IL++
Sbjct: 596 FAVHSQMLTEGVSPN-VETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVS 654
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
K+G + + ++ F P T+ LI ++ +A L +++V G P
Sbjct: 655 GHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPP 714
Query: 121 NVFTYNTLINGLY------------RTGHTIVALNLFEEM 148
N TY+ LI G Y + + A LFEEM
Sbjct: 715 NSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEM 754
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 161/330 (48%), Gaps = 25/330 (7%)
Query: 53 YTYNILINCFCKMGRVSHGFVVL-GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 111
Y +N LI+ C+ GRV+ VVL G + R C P+ VT+ L++ C +A L
Sbjct: 164 YAHNPLIHALCERGRVADALVVLDGMLCRGC-APDVVTYNILLQAACKGRGYRQALELID 222
Query: 112 KLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQM 171
+R GCEPN TYN +I+ + R EG VD+A+EL +
Sbjct: 223 FMRAEGCEPNNVTYNVIIDAMCR-----------------------EGDVDQARELLNSL 259
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
P+ V Y +V++GFC W +A +L EM+ + PN T NVI++ LC+ G +
Sbjct: 260 PSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLL 319
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
+ + L+ M + G N YN ++ G C G V+ A EL +M+S GC + +Y+ +
Sbjct: 320 QKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTV 379
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
+ G C E A L +M PD +NT+ + + +AF++F +M G
Sbjct: 380 LKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGC 439
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
++ TY T I GL K + +A+EL +
Sbjct: 440 NPNSTTYSTIIGGLTKAGKMEQALELLNEM 469
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 188/401 (46%), Gaps = 20/401 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D ML R P V ++NIL K + Y L L + + G P+ TYN++I+
Sbjct: 185 VLDGML-CRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAM 243
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ G V +L + PN V + +++KG C+ R ++A + ++ C PN
Sbjct: 244 CREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNE 303
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFL 169
T N +IN L R G + + L+ E S +G +G VD A EL
Sbjct: 304 ATLNVIINTLCRKG-LLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLS 362
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
M+ PD+VTY +V++G C A+ W +A+ L+I+M P+ TFN I+ C+ G
Sbjct: 363 NMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKG 422
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+ +A + M + G PN+ Y+T++ G G++ +A EL M + G +T Y
Sbjct: 423 LILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKG-FNTDKMYR 481
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
+L K +IE + + ++ GI P V+YNT+ + L + + A + +M
Sbjct: 482 VLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSC 541
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
G D TY I+GL Y EA EL L C D+
Sbjct: 542 GCMPDESTYIILIEGLFYEGYSKEARELLSRL----CSRDV 578
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 175/394 (44%), Gaps = 13/394 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+ N L L + L + + G PD+ TYNIL+ CK ++ +
Sbjct: 165 AHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFM 224
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PN VT+ +I +C E + +A L L GC+PN YNT++ G
Sbjct: 225 RAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERW 284
Query: 139 IVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
+ A + +EM N +G + K +M +VVTY +V
Sbjct: 285 VDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAV 344
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G C + + A LL M G +P++VT+N ++ LC + ++A L+ M Q
Sbjct: 345 ISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDR 404
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+ +NT++ +C G + +A E+F M GC +YS +I G K ++E AL
Sbjct: 405 LPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALE 464
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L EM +KG D +Y L L + ++E ++ ++Q G++ T Y T + GLC
Sbjct: 465 LLNEMANKGFNTD-KMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLC 523
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+N A+++ + C D Y LI+GL
Sbjct: 524 RNGKTDYAIDVLADMVSCGCMPDESTYIILIEGL 557
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 171/394 (43%), Gaps = 26/394 (6%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++ P PP V N L L + + + + G TY L++ +C+ G
Sbjct: 86 LVGSSPRPPDVPLANRLVRDLCRRGRPADAARVVE---ACGPEATAATYGALVDGYCRAG 142
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ V+G + +A LI LC R+ +A + + GC P+V TYN
Sbjct: 143 LLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYN 202
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
L+ + G G +A EL M+ E P+ VTY +
Sbjct: 203 ILL----------------QAACKGRG-------YRQALELIDFMRAEGCEPNNVTYNVI 239
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I C D ++A+ LL + +G +PN V +N ++ C + +A +LD M++
Sbjct: 240 IDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENC 299
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
PN N +++ C G + + M GCT V +Y+ +I+G C+ ++ AL
Sbjct: 300 PPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALE 359
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L M S G KPD+V YNT+ L + E A +L +M ++ D T+ T I C
Sbjct: 360 LLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWC 419
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ I++A E+F+ + C + Y+ +I GL
Sbjct: 420 QKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGL 453
>gi|302763351|ref|XP_002965097.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
gi|300167330|gb|EFJ33935.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
Length = 540
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 190/391 (48%), Gaps = 10/391 (2%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++ + L K D ++ F+R+ + PDL T+ ++I CK G+++ V
Sbjct: 107 VVAYTAIINALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQ 166
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ R + P+ + +TSL+ GL S + EA L ++ G +P TY + I+GL + G
Sbjct: 167 EMNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNG 226
Query: 137 HTIVALNLFEEMASGN---------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
A L EM G + +EG +++A L +M + + DV YT++I
Sbjct: 227 RVEEAGKLVREMGKMCAAEVLHCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLI 286
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
G Y +EA+ + M+ QG P+ T+ +I+ CK GKM A +++++M G+
Sbjct: 287 HGLFYVRRNDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLE 346
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
N VYN+LMDGF R A ++ +M ++ +Y+IL+ G CK + A +
Sbjct: 347 ANCHVYNSLMDGFLGVNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLV 406
Query: 308 YGEMLSK-GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
EM + GI P +V Y TL L + + + A +F EM +GV D + + I L
Sbjct: 407 LREMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALA 466
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ EA +L R + + D AYN L+
Sbjct: 467 MADRMDEATQLLRDMPRMGITPDALAYNALV 497
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/360 (30%), Positives = 170/360 (47%), Gaps = 15/360 (4%)
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 110
D+ +YNI+I C GR S + +L + + VT ++K LC + +A + F
Sbjct: 3 DVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYF 62
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFV--------- 161
+ + +V +Y TLI GL +G VA LFEEM+S + V
Sbjct: 63 HSVSPRS-DLDVVSYTTLIMGLADSGRIDVACELFEEMSSSGSQCVVAYTAIINALFKAH 121
Query: 162 --DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 219
D+A F +M +PD+ T+T VI G C A N A + EM +G +P+++ +
Sbjct: 122 RPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYT 181
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
++D L K MDEA +LL ++ G++P Y + + G C GRV A +L M M
Sbjct: 182 SLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREMGKM 241
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
C V + GY +IE AL+L EM+ KG+ DV Y L LF + + + A
Sbjct: 242 -CAAEVLH--CIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEA 298
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
++F+ M R G DT TY + CK + A ++ + E + YN L+DG
Sbjct: 299 QEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDG 358
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 193/446 (43%), Gaps = 90/446 (20%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V S+NI+ L + L K + + G+ T+ I++ C+ V
Sbjct: 4 VASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYFH 63
Query: 77 RIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRT 135
+ RS + V++T+LI GL RI A LF ++ G + V Y +IN L++
Sbjct: 64 SVSPRSDL--DVVSYTTLIMGLADSGRIDVACELFEEMSSSGSQ-CVVAYTAIINALFKA 120
Query: 136 GHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTY 183
A+ FE M + + + F +++A E+F +M + PD++ Y
Sbjct: 121 HRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVY 180
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
TS++ G A+ +EA+ LL E++ +G++P VT+ + LCKNG+++EA +L+ +
Sbjct: 181 TSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVR---E 237
Query: 244 IGVRPNAFVYNTLMDGFCLTGRV-----------------------------------NR 268
+G A V + + G+ L G++ +
Sbjct: 238 MGKMCAAEVLHCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDE 297
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG------------------------- 303
A+E+F +M GC +Y ++++ +CK +++
Sbjct: 298 AQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMD 357
Query: 304 ----------ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM-QRDGVA 352
A+++Y ML K +KP +V YN L + L ++ Q A + EM +RDG+
Sbjct: 358 GFLGVNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIV 417
Query: 353 ADTWTYRTFIDGLCKNSYIVEAVELF 378
+YRT I GL K EA+++F
Sbjct: 418 PTIVSYRTLIHGLGKAGRADEAIDVF 443
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 122/264 (46%), Gaps = 23/264 (8%)
Query: 18 CSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGR 77
C N++ G L + D +F+ + G PD TY ++++ FCK G++ V+
Sbjct: 281 CYTNLIHG-LFYVRRNDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEI 339
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
+ + N + SL+ G +R EA +++ + +P++ TYN L+ GL + G
Sbjct: 340 MDAAGLEANCHVYNSLMDGFLGVNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQ 399
Query: 138 TIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
T A + EM +G I P +V+Y ++I G A +
Sbjct: 400 TADARLVLREMRERDG----------------------IVPTIVSYRTLIHGLGKAGRAD 437
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
EA + EM+D GV P+ + ++ L +MDEA++LL M ++G+ P+A YN L+
Sbjct: 438 EAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNALV 497
Query: 258 DGFCLTGRVNRAKELFVSMESMGC 281
C +V A ++ V M C
Sbjct: 498 KVLCGGAKVGPAWDVLVEMMDNSC 521
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 131/315 (41%), Gaps = 28/315 (8%)
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
+ ++ +I+GLC R A L ++ G + + T+ ++ L AL+ F
Sbjct: 3 DVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYF 62
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
++ + + DVV+YT++I G + + A C L E
Sbjct: 63 HSVSPRS------------------------DLDVVSYTTLIMGLADSGRIDVA-CELFE 97
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M VV + I++ L K + D+A + M+ P+ + ++ G C G+
Sbjct: 98 EMSSSGSQCVVAYTAIINALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGK 157
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
+NRA E+F M G + Y+ L++G K ++ A L E++S+G+KP V Y +
Sbjct: 158 LNRACEVFQEMNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTS 217
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L + +VE A KL EM G G I EA+ L +
Sbjct: 218 FISGLCKNGRVEEAGKLVREM---GKMCAAEVLHCIFGGYVLEGKIEEALTLKDEMVKKG 274
Query: 386 CELDIRAYNCLIDGL 400
LD+R Y LI GL
Sbjct: 275 VTLDVRCYTNLIHGL 289
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 24/177 (13%)
Query: 15 PPVCSFNILFGCLAK-NKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P + ++NIL L K + D L L + G+ P + +Y LI+ K GR
Sbjct: 382 PSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRADEAID 441
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
V ++ + P+ + TSLI+ L R+ EA L + G P+ YN L+ L
Sbjct: 442 VFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNALVKVL- 500
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
G + G A ++ ++M D + PD T+ ++ GF
Sbjct: 501 ----------------CGGAKVG------PAWDVLVEMMDNSCVPDGSTFRAMKLGF 535
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 166/349 (47%), Gaps = 21/349 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V S++ L K + +F+ + G PD +TYNILIN CK ++ G ++
Sbjct: 91 VISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMD 150
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ F+P VT+T+LI G C R+ A + ++ G PN TY LI GL G
Sbjct: 151 EMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCG 210
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
A+ + +EM +++ P+VVTYT +I G C +
Sbjct: 211 EVERAILVLKEM---------------------KLRGNECCPNVVTYTQLIHGLCQKGLF 249
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
L EM+ G PN T+ ++ LC+ G EA+ LL+ M+ IG + +YN+L
Sbjct: 250 EMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSL 309
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG C G ++ A+E+ + M G VF+Y+ LI G C ++ AL L EM +KGI
Sbjct: 310 IDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGI 369
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
P+ V Y TL + + + A +L +EM+ +G+ Y+ L
Sbjct: 370 VPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/323 (34%), Positives = 164/323 (50%), Gaps = 25/323 (7%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
+ S P ++NIL L K+ + +SL + + G P + TY LI+ FC GRV
Sbjct: 120 KGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDA 179
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG--CEPNVFTYNTL 128
+L + TPN VT+T+LI+GLC + A + ++++ G C PNV TY L
Sbjct: 180 AMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQL 239
Query: 129 INGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
I+GL + G LFE G+E F+D +M P+ TYT++I
Sbjct: 240 IHGLCQKG-------LFE--------MGME-FLD-------EMIISGCFPNNATYTALIH 276
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
G C + EA LL EM+ G + +VV +N ++D LCK G++D A + LM++ GV P
Sbjct: 277 GLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAP 336
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
+ F Y +L+ G C G ++ A L M + G +Y+ LING+ + + AL L
Sbjct: 337 DVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLV 396
Query: 309 GEMLSKGIKPDVVIYNTLFVVLF 331
EM S G+ P IY LF L+
Sbjct: 397 NEMKSNGLMPAGDIYKILFKSLY 419
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 164/344 (47%), Gaps = 27/344 (7%)
Query: 41 KRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 100
K LNS D+ +Y+ IN CK G+++ + + P++ T+ LI GLC +
Sbjct: 82 KLLNSQDT--DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKD 139
Query: 101 SRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF 160
+++ +L +++ G P V TY TLI+G F G
Sbjct: 140 AQLEMGVSLMDEMQARGFSPTVVTYTTLIHG-----------------------FCTAGR 176
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ--PNVVTF 218
VD A ++ +M+ I P+ VTYT++I+G C + A +L EM +G + PNVVT+
Sbjct: 177 VDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTY 236
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
++ LC+ G + LD MI G PN Y L+ G C G A L M +
Sbjct: 237 TQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVA 296
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
+GC V Y+ LI+G CK E++ A + M+ KG+ PDV Y +L L + ++
Sbjct: 297 IGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDE 356
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
A L EM+ G+ ++ TY T I+G + A++L ++
Sbjct: 357 ALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMK 400
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 115/224 (51%), Gaps = 2/224 (0%)
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
DV++Y+ I G C EA + EM ++G P+ T+N++++ LCK+ +++ L+
Sbjct: 90 DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
D M G P Y TL+ GFC GRV+ A ++ ME G T +Y+ LI G C
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209
Query: 299 KEIEGALSLYGEMLSKGIK--PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
E+E A+ + EM +G + P+VV Y L L + E + DEM G +
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY I GLC+ +EA L + + CELD+ YN LIDGL
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGL 313
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%)
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
+ + I +L +Y L DV+ Y+ L + Q+ A ++F EM+ G A D++
Sbjct: 68 RRRGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSF 127
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
TY I+GLCK++ + V L ++ + Y LI G
Sbjct: 128 TYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHG 170
>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
Length = 466
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 189/399 (47%), Gaps = 24/399 (6%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP +F +N D + L ++ G PD+ Y+ LIN F + G V
Sbjct: 39 PPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALD 98
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L +L PN V + + +KGLC R + L ++ GC PN T++ LI+ L
Sbjct: 99 LLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLC 155
Query: 134 RTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVV 181
+ A+ + E+M E G VD A L M PD +
Sbjct: 156 QNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDAL 212
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+ +V++GFC A W++A L+ +M +TFN+++D LC+NG ++ A+++ + M
Sbjct: 213 GFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQM 272
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ P+ Y++L++GF G V A +LF SM C +FSY+ ++ G C+
Sbjct: 273 PRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLF---RSMPCKPDIFSYNAVLKGLCRAARW 329
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A L EM+ K P+ V +N L L + V+RA ++ ++M G D +TY
Sbjct: 330 EDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNAL 389
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I+G + + +A++L T + C+ D +YN + GL
Sbjct: 390 INGFSEQGRLDDALKLLST---MSCKPDAISYNSTLKGL 425
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 161/321 (50%), Gaps = 21/321 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F++L L +N D+ + + +++ G PD YNI+IN + GRV +
Sbjct: 142 PNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRL 201
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+A+ F +++KG C R +A+ L ++ C T+N LI+ L +
Sbjct: 202 LNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQ 258
Query: 135 TGHTIVALNLFEEM------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G A +FE+M +S F +G V+ A +LF M PD+ +
Sbjct: 259 NGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFS 315
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +V++G C A W +A L+ EM+ + PN VTFN++++ LC+ G +D A +L+ M
Sbjct: 316 YNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMP 375
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G P+ F YN L++GF GR++ A +L + +M C SY+ + G C+ + +
Sbjct: 376 NYGSTPDIFTYNALINGFSEQGRLDDALKL---LSTMSCKPDAISYNSTLKGLCRAERWQ 432
Query: 303 GALSLYGEMLSKGIKPDVVIY 323
A L EML P+ V +
Sbjct: 433 DAEELVAEMLRNKCTPNEVTF 453
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 116/224 (51%), Gaps = 6/224 (2%)
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+ PD TY +V++G C A W EA+ L+ EM+ PN VTF + C+NG +D A
Sbjct: 3 VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAV 62
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+LLD M + G P+ +Y+TL++GF G V++A +L + +M C Y+ + G
Sbjct: 63 QLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL---LNTMLCKPNTVCYNAALKGL 119
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
C + E L EM+ KG P+ ++ L L + + V+ A ++ ++M++ G DT
Sbjct: 120 CIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDT 179
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
Y I+ L + + +A R L + C+ D +N ++ G
Sbjct: 180 VNYNIIINSLSERGRVDDA---LRLLNSMVCKPDALGFNAVLKG 220
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 3/137 (2%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P P + S+N + L + ++ L + P+ T+NILIN C+ G V
Sbjct: 308 PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRA 367
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
VL ++ TP+ T+ +LI G + R+ +A L L C+P+ +YN+ + G
Sbjct: 368 IEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKL---LSTMSCKPDAISYNSTLKG 424
Query: 132 LYRTGHTIVALNLFEEM 148
L R A L EM
Sbjct: 425 LCRAERWQDAEELVAEM 441
>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 587
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 182/402 (45%), Gaps = 15/402 (3%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P P ++N L L L L + G PD+ TYNIL+ CK GR
Sbjct: 147 PVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACK-GRGYRQ 205
Query: 72 FVVLGRILR-SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ L ++R TP VT+ ++ G+C E + A L L +GC PN YNT++
Sbjct: 206 AMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLK 265
Query: 131 GLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINP 178
GL G L EM S N EG +A L +M +
Sbjct: 266 GLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTA 325
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
++VTY +V+ G C + A LL M G +PN+ T+N+++ LC + ++A L+
Sbjct: 326 NIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLM 385
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
M Q P+ +NT++ C G +A E+F M GC +YS +I G K
Sbjct: 386 AKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKT 445
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
++E +L L EM SKG P++ Y+ L L E ++ A ++ ++Q G++ Y
Sbjct: 446 GKMEQSLELLNEMGSKGFNPEIN-YHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLY 504
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
T + GLC+N +A+++ + C D Y+ LI GL
Sbjct: 505 NTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGL 546
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 162/367 (44%), Gaps = 31/367 (8%)
Query: 32 HYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTP-NAVTF 90
H + + + + S+ PD+ N L+ C+ GR + R++ +C + AVT+
Sbjct: 68 HRGELDAALRVVESSLCPPDVALANRLVRDLCRRGRPADA----ARVVEACGSAATAVTY 123
Query: 91 TSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS 150
++L G C R+ EA + + V P+ + YN L++ L G AL L + M
Sbjct: 124 SALADGYCRVGRLDEARRVVDGMPVL---PSAYAYNPLMHALCVRGQVRDALVLLDNM-- 178
Query: 151 GNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG 210
L+ PDVVTY ++ C + +A L+ M +G
Sbjct: 179 ----------------LY-----RGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEG 217
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
P VT+NVIMD +C+ G +D A LL+ + G PN YNT++ G GR +
Sbjct: 218 CTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVE 277
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
EL M S C + + S++I+ C+ + A+ L +M ++V YN + L
Sbjct: 278 ELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGL 337
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
E V+ A L MQ DG + +TY + GLC +A +L + C DI
Sbjct: 338 CEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDI 397
Query: 391 RAYNCLI 397
+N +I
Sbjct: 398 LTFNTII 404
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 153/347 (44%), Gaps = 26/347 (7%)
Query: 54 TYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL 113
TY+ L + +C++GR+ V+ + P+A + L+ LC ++ +A L +
Sbjct: 122 TYSALADGYCRVGRLDEARRVVDGMP---VLPSAYAYNPLMHALCVRGQVRDALVLLDNM 178
Query: 114 RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKD 173
GC P+V TYN L+ E G G +A EL M+
Sbjct: 179 LYRGCAPDVVTYNILL----------------EAACKGRG-------YRQAMELIDLMRV 215
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
E P VTY ++ G C D + A+ LL + G PN V +N ++ L G+ ++
Sbjct: 216 EGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWED 275
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
L+ M P+ + ++ C G RA L M CT + +Y+ +++
Sbjct: 276 VEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVS 335
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
G C+ ++GAL L M + G KP++ YN L L + E A L +M +
Sbjct: 336 GLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLP 395
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D T+ T I LC+ ++AVE+F+ + C + Y+ +I+GL
Sbjct: 396 DILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGL 442
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 165/343 (48%), Gaps = 16/343 (4%)
Query: 7 MLNMRPS---PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
+LN PS P ++N + L ++ V L + S P T +++I+ C
Sbjct: 244 LLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLC 303
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ G +L ++ + T N VT+ +++ GLC + + A L + ++ GC+PN+F
Sbjct: 304 QEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIF 363
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQM 171
TYN L+ GL A +L +M+ + G +G +A E+F QM
Sbjct: 364 TYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQM 423
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
++ P+ VTY+SVI G ++ LL EM +G P + ++++ + L + K+
Sbjct: 424 PEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEI-NYHLLAECLNEEDKL 482
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
EA +++ + G+ P A +YNT++ G C G+ ++A ++ +M S GC +YSIL
Sbjct: 483 VEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSIL 542
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
I G ++ A L + S+ + D +I N ++ IH
Sbjct: 543 IQGLAHEGYMKEARELLSTLSSRDVIVDNLIKNDASLLDQSIH 585
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 154/352 (43%), Gaps = 32/352 (9%)
Query: 75 LGRILRSCFTPNAVTFTSLI--------KGLCAESR----IMEAAALFTKLRVFG---CE 119
L +ILRS PNA +F + L E R ++ L LRV C
Sbjct: 27 LSQILRS-SNPNAPSFPKPNPDPPPPPPRRLHGEDRRLSSLVHRGELDAALRVVESSLCP 85
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE-----------GFVDKAKELF 168
P+V N L+ L R G A + E A G+ V G +D+A+ +
Sbjct: 86 PDVALANRLVRDLCRRGRPADAARVVE--ACGSAATAVTYSALADGYCRVGRLDEARRVV 143
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
M + P Y ++ C +A LL M+ +G P+VVT+N++++ CK
Sbjct: 144 DGMP---VLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKG 200
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
+A L+DLM G P YN +MDG C G V+ A+EL S+ S GCT +Y
Sbjct: 201 RGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNY 260
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ ++ G E L EM S+ P + + L + +RA +L ++M +
Sbjct: 261 NTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSK 320
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
A+ TY + GLC+ ++ A+ L ++ C+ +I YN L+ GL
Sbjct: 321 HDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGL 372
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 179/367 (48%), Gaps = 23/367 (6%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
+ L ++KR+ S G+ P + TY+ L+ + G +L + PN T+T
Sbjct: 217 NEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTIC 276
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG 153
I+ L RI +A +F ++ GC P+V TY LI+ L G
Sbjct: 277 IRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGK---------------- 320
Query: 154 EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
+DKAKEL+++M+ + +PD VTY +++ F D K EM G P
Sbjct: 321 -------LDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAP 373
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
+VVT+ ++++ LCK+G +D A +LD+M G+ PN YNT++ G R++ A EL
Sbjct: 374 DVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELL 433
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
+MES+G T FSY + I+ Y K+ + A+ + M +GI P + N L E
Sbjct: 434 ENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAET 493
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
++ A +F+++ + G++ D+ TY + K I +A +L + CE D+
Sbjct: 494 GRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMII 553
Query: 394 NCLIDGL 400
N LI+ L
Sbjct: 554 NSLINTL 560
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 201/421 (47%), Gaps = 58/421 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +++ L L + +++L + + S GL P++YTY I I + R+ + +
Sbjct: 233 PSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGI 292
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ P+ +T+T LI LCA ++ +A L+ K+R P+ TY TL++
Sbjct: 293 FKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMD---- 348
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+FG G ++ K + +M+ + PDVVTYT +I C +
Sbjct: 349 -------------------KFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSG 389
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
D + A +L M +G+ PN+ T+N ++ L K ++DEA LL+ M +GV+P AF Y
Sbjct: 390 DVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYV 449
Query: 255 TLMDGF-----------------------------------CLTGRVNRAKELFVSMESM 279
+D + TGR++ A+++F +
Sbjct: 450 LFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKC 509
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G + +Y++L+ Y K +I+ A L EM+SKG +PDV+I N+L L++ +V+ A
Sbjct: 510 GLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAA 569
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+K+F ++ +A TY + GL K I++A+ELF ++ C + +N L+D
Sbjct: 570 WKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDC 629
Query: 400 L 400
L
Sbjct: 630 L 630
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 124/469 (26%), Positives = 204/469 (43%), Gaps = 83/469 (17%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR------ 67
PP +FN L CL+KN D L +F R+ PD+ TYN +I + GR
Sbjct: 617 PPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFW 676
Query: 68 -----------------------VSHGFV------VLGRILRSCFTPN------------ 86
V HG V V+ + ++C N
Sbjct: 677 FFHQMKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECIL 736
Query: 87 -------AVTFTS----------------LIKGLCAESRIMEAAALFTKL-RVFGCEPNV 122
A++F LIK LC + ++A +F K + G P +
Sbjct: 737 TEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTL 796
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQ 170
+YN L++GL + T AL LFE+M S G ++K +L+ +
Sbjct: 797 ESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSE 856
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M+ P+ +T+ +I +N+ N+A L E+M P T+ ++D L K G+
Sbjct: 857 MRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGR 916
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
++A ++ + M+ G PN+ +YN L++GF +G ++ A ELF M G + SY+I
Sbjct: 917 SEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTI 976
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L+ C I+ A+ + E+ G+ PD V YN + L + +++ A LF EM+ G
Sbjct: 977 LVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRG 1036
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
++ D +TY I L + AV+++ L+++ E + YN LI G
Sbjct: 1037 ISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRG 1085
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 180/372 (48%), Gaps = 24/372 (6%)
Query: 23 LFGCLAKNKHYDTVLSLFKRLNST-GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRS 81
L L K K ++F + G+ P L +YN L++ + + +
Sbjct: 766 LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSA 825
Query: 82 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVA 141
PN T+ L+ RI + L++++R GCEPN T+N +I+ L ++ + A
Sbjct: 826 GTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKA 885
Query: 142 LNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
L+L+ E+ SG+ +P TY +I G A +A
Sbjct: 886 LDLYYELMSGD-----------------------FSPTPCTYGPLIDGLLKAGRSEQAMK 922
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
+ EM+D G PN V +N++++ K+G++D A L M++ G+RP+ Y L++ C
Sbjct: 923 IFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLC 982
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
+TGR++ A + F ++ G SY+ +ING K++ ++ ALSL+ EM ++GI PD+
Sbjct: 983 ITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLY 1042
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
YN L + L +V+ A K+++E+Q G+ +TY I G + +A +F+ +
Sbjct: 1043 TYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKM 1102
Query: 382 RILKCELDIRAY 393
++ C + +
Sbjct: 1103 MVVGCSPNTETF 1114
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 186/384 (48%), Gaps = 15/384 (3%)
Query: 8 LNMRPSP--PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
+ MR S P ++ L K +TV + + G PD+ TY ILI CK
Sbjct: 329 VKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKS 388
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
G V F +L + PN T+ ++I GL R+ EA L + G +P F+Y
Sbjct: 389 GDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSY 448
Query: 126 NTLINGLYRTGHTIVALNLFEEM---------ASGNGEF---GVEGFVDKAKELFLQMKD 173
I+ ++G A++ FE M A+ N G + +A+++F +
Sbjct: 449 VLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHK 508
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
++PD VTY +++ + A ++A LL EM+ +G +P+V+ N +++ L K G++D
Sbjct: 509 CGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDA 568
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A ++ + + + P YN L+ G G++ +A ELF SM GC +++ L++
Sbjct: 569 AWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLD 628
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
KN ++ AL ++ M PDV+ YNT+ L +++ AF F +M++ ++
Sbjct: 629 CLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKK-FLSP 687
Query: 354 DTWTYRTFIDGLCKNSYIVEAVEL 377
D T T I G+ ++ + +A+++
Sbjct: 688 DYVTLCTLIPGVVRHGRVEDAIKV 711
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 186/398 (46%), Gaps = 12/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++ I L + + D +FK ++ G PD+ TY +LI+ C G++ +
Sbjct: 268 PNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKEL 327
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ S +P+ VT+ +L+ + + ++ V G P+V TY LI L +
Sbjct: 328 YVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCK 387
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
+G A ++ + M + + + +D+A EL M+ + P +
Sbjct: 388 SGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFS 447
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y I + + D +A M +G+ P++ N + L + G++ EA + + +
Sbjct: 448 YVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLH 507
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ P++ YN LM + G++++A +L M S GC V + LIN K ++
Sbjct: 508 KCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVD 567
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A ++G + + + P VV YN L L + ++ +A +LF M G +T T+ + +
Sbjct: 568 AAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLL 627
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D L KN + A+++F + ++ C D+ YN +I GL
Sbjct: 628 DCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGL 665
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 177/380 (46%), Gaps = 12/380 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ +L L D L+ ++ ++ PD TY L++ F K+G +
Sbjct: 303 PDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRF 362
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + P+ VT+T LI+ LC + A + + G PN+ TYNT+I GL +
Sbjct: 363 WNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLK 422
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
AL L E M S + +G G KA + F MK I P +
Sbjct: 423 ARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAA 482
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ + +EA+ + ++ G+ P+ VT+N++M K G++D+A++LL MI
Sbjct: 483 CNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMI 542
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G P+ + N+L++ GRV+ A ++F ++++ TV +Y+IL+ G K +I
Sbjct: 543 SKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKIL 602
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL L+G M G P+ + +N+L L + V+ A K+F M D TY T I
Sbjct: 603 KALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTII 662
Query: 363 DGLCKNSYIVEAVELFRTLR 382
GL + I A F ++
Sbjct: 663 YGLIREGRIDYAFWFFHQMK 682
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 163/324 (50%), Gaps = 12/324 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S+N L L + + L LF+ + S G P+ +TYN+L++ K R++ + +
Sbjct: 794 PTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDL 853
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ PNA+T +I L + + +A L+ +L P TY LI+GL +
Sbjct: 854 YSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLK 913
Query: 135 TGHTIVALNLFEEMAS-GNGE-----------FGVEGFVDKAKELFLQMKDENINPDVVT 182
G + A+ +FEEM G G FG G +D A ELF +M E I PD+ +
Sbjct: 914 AGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKS 973
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT ++ C +EA E+ G+ P+ V++N I++ L K+ ++DEA L M
Sbjct: 974 YTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMK 1033
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ P+ + YN L+ + G+V+ A +++ ++ +G +VF+Y+ LI G+ + +
Sbjct: 1034 NRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKD 1093
Query: 303 GALSLYGEMLSKGIKPDVVIYNTL 326
A S++ +M+ G P+ + L
Sbjct: 1094 QAFSVFKKMMVVGCSPNTETFAQL 1117
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 148/295 (50%), Gaps = 12/295 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N+L K+K + + L+ + S G P+ T+NI+I+ K ++ +
Sbjct: 829 PNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDL 888
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ F+P T+ LI GL R +A +F ++ +GC PN YN LING +
Sbjct: 889 YYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGK 948
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
+G A LF++M + G +D+A + F ++K ++PD V+
Sbjct: 949 SGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVS 1008
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I G + +EA L EM ++G+ P++ T+N ++ L GK+D A ++ + +
Sbjct: 1009 YNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQ 1068
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
+G+ P+ F YN L+ G L+G ++A +F M +GC+ +++ L N Y +
Sbjct: 1069 LVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPR 1123
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 180/400 (45%), Gaps = 15/400 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++NIL L K L LF + +G P+ T+N L++C K V +
Sbjct: 583 PTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKM 642
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R+ P+ +T+ ++I GL E RI A F +++ F P+ T TLI G+ R
Sbjct: 643 FCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKF-LSPDYVTLCTLIPGVVR 701
Query: 135 TGHTIVALNLFEEMA-----SGNGEFG--------VEGFVDKAKELFLQMKDENINPDVV 181
G A+ + E N +F E +++A + ++ D
Sbjct: 702 HGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDH 761
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+I+ C +A+ + + G+ P + ++N +MD L + ++A L +
Sbjct: 762 VMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFED 821
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M G PN F YN L+D + R+N+ +L+ M S GC +++I+I+ K+
Sbjct: 822 MKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNN 881
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ AL LY E++S P Y L L + + E+A K+F+EM G ++ Y
Sbjct: 882 LNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNI 941
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I+G K+ I A ELF+ + D+++Y L++ L
Sbjct: 942 LINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECL 981
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 152/343 (44%), Gaps = 24/343 (6%)
Query: 56 NILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV 115
N ++ + R+ V + + N T+ ++ K L + I A K+
Sbjct: 135 NYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTE 194
Query: 116 FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDEN 175
G N ++YN LI+ L + GF ++A +++ +M E
Sbjct: 195 VGFILNAYSYNGLIHLL------------------------LPGFCNEALKVYKRMISEG 230
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+ P + TY++++ D + LL EM G++PN+ T+ + + L + ++D+A
Sbjct: 231 MKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAW 290
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+ M G P+ Y L+D C G++++AKEL+V M + + +Y L++ +
Sbjct: 291 GIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKF 350
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
K ++E + EM G PDVV Y L L + V+RAF + D M G+ +
Sbjct: 351 GKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNL 410
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
TY T I GL K + EA+EL + L + +Y ID
Sbjct: 411 HTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFID 453
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 121/250 (48%), Gaps = 9/250 (3%)
Query: 155 FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIR----GFCYANDWNEAKCLLIEMMDQG 210
++G + +A +M + + +Y +I GFC NEA + M+ +G
Sbjct: 176 LSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLLPGFC-----NEALKVYKRMISEG 230
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
++P++ T++ +M L + G + LL+ M IG+RPN + Y + R++ A
Sbjct: 231 MKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAW 290
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
+F M+ GC V +Y++LI+ C +++ A LY +M + PD V Y TL
Sbjct: 291 GIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKF 350
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
++ +E + ++EM+ DG A D TY I+ LCK+ + A ++ + ++
Sbjct: 351 GKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNL 410
Query: 391 RAYNCLIDGL 400
YN +I GL
Sbjct: 411 HTYNTMICGL 420
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 121/255 (47%), Gaps = 24/255 (9%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
SP P C++ L L K + + +F+ + G P+ YNILIN F K G +
Sbjct: 898 SPTP-CTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFAC 956
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+ ++++ P+ ++T L++ LC RI EA F +L++ G +P+ +YN +INGL
Sbjct: 957 ELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGL 1016
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
G +D+A LF +MK+ I+PD+ TY ++I
Sbjct: 1017 -----------------------GKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGI 1053
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
A + A + E+ G++P+V T+N ++ +G D+A + M+ +G PN
Sbjct: 1054 AGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTET 1113
Query: 253 YNTLMDGFCLTGRVN 267
+ L + + G V+
Sbjct: 1114 FAQLPNKYPRAGLVH 1128
>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
Length = 649
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 189/399 (47%), Gaps = 24/399 (6%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP +F +N D + L ++ G PD+ Y+ LIN F + G V
Sbjct: 222 PPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALD 281
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L +L PN V + + +KGLC R + L ++ GC PN T++ LI+ L
Sbjct: 282 LLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLC 338
Query: 134 RTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVV 181
+ A+ + E+M E G VD A L M PD +
Sbjct: 339 QNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDAL 395
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+ +V++GFC A W++A L+ +M +TFN+++D LC+NG ++ A+++ + M
Sbjct: 396 GFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQM 455
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ P+ Y++L++GF G V A +LF SM C +FSY+ ++ G C+
Sbjct: 456 PRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLF---RSMPCKPDIFSYNAVLKGLCRAARW 512
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A L EM+ K P+ V +N L L + V+RA ++ ++M G D +TY
Sbjct: 513 EDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNAL 572
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I+G + + +A++L T + C+ D +YN + GL
Sbjct: 573 INGFSEQGRLDDALKLLST---MSCKPDAISYNSTLKGL 608
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 161/321 (50%), Gaps = 21/321 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F++L L +N D+ + + +++ G PD YNI+IN + GRV +
Sbjct: 325 PNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRL 384
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+A+ F +++KG C R +A+ L ++ C T+N LI+ L +
Sbjct: 385 LNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQ 441
Query: 135 TGHTIVALNLFEEM------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G A +FE+M +S F +G V+ A +LF M PD+ +
Sbjct: 442 NGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFS 498
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +V++G C A W +A L+ EM+ + PN VTFN++++ LC+ G +D A +L+ M
Sbjct: 499 YNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMP 558
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G P+ F YN L++GF GR++ A +L + +M C SY+ + G C+ + +
Sbjct: 559 NYGSTPDIFTYNALINGFSEQGRLDDALKL---LSTMSCKPDAISYNSTLKGLCRAERWQ 615
Query: 303 GALSLYGEMLSKGIKPDVVIY 323
A L EML P+ V +
Sbjct: 616 DAEELVAEMLRNKCTPNEVTF 636
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 175/388 (45%), Gaps = 37/388 (9%)
Query: 39 LFKRLNSTGLFPD---------------LYTYNILINCFCKMGRVSHGFVVLGRILRSCF 83
L K+L +TG D ++N L+ +C+ GR++ VLG R+
Sbjct: 96 LIKKLCATGRLADAERVLDALKAAAAADAVSHNTLVAGYCRDGRLADAERVLG-AARATG 154
Query: 84 TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL-----YRTGHT 138
N VT+T+LI G C R+ +A L + V P+ +TYNT++ GL +
Sbjct: 155 AANVVTYTALIDGYCRSGRLDDALRLIASMPV---APDTYTYNTVLKGLCIAKKWEEAEE 211
Query: 139 IVALNLFEEMASGNGEFGVE-------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
++A + F + G +D+A +L QM PDVV Y+++I GF
Sbjct: 212 LMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFS 271
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
++A LL M+ +PN V +N + LC + ++ L+ M++ G PN
Sbjct: 272 EQGHVDQALDLLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEA 328
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
++ L+ C V+ A E+ ME GC +Y+I+IN + ++ AL L M
Sbjct: 329 TFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSM 388
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
+ KPD + +N + + A +L +M RD T+ ID LC+N +
Sbjct: 389 V---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLV 445
Query: 372 VEAVELFRTLRILKCELDIRAYNCLIDG 399
A ++F + +C DI Y+ L++G
Sbjct: 446 NYATQVFEQMPRYRCTPDIVTYSSLLNG 473
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 162/344 (47%), Gaps = 34/344 (9%)
Query: 56 NILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV 115
NILI C GR++ VL + + +AV+ +L+ G C + R+ +A + R
Sbjct: 94 NILIKKLCATGRLADAERVLDALKAAAAA-DAVSHNTLVAGYCRDGRLADAERVLGAARA 152
Query: 116 FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDEN 175
G NV TY LI+G R+G AL L M
Sbjct: 153 TGAA-NVVTYTALIDGYCRSGRLDDALRLIASMP-------------------------- 185
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+ PD TY +V++G C A W EA+ L+ EM+ PN VTF + C+NG +D A
Sbjct: 186 VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAV 245
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+LLD M + G P+ +Y+TL++GF G V++A +L + +M C Y+ + G
Sbjct: 246 QLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL---LNTMLCKPNTVCYNAALKGL 302
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
C + E L EM+ KG P+ ++ L L + + V+ A ++ ++M++ G DT
Sbjct: 303 CIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDT 362
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
Y I+ L + + +A+ L + + C+ D +N ++ G
Sbjct: 363 VNYNIIINSLSERGRVDDALRLLNS---MVCKPDALGFNAVLKG 403
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P P + S+N + L + ++ L + P+ T+NILIN C+ G V
Sbjct: 491 PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRA 550
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
VL ++ TP+ T+ +LI G + R+ +A L + + C+P+ +YN+ + G
Sbjct: 551 IEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKG 607
Query: 132 LYRTGHTIVALNLFEEM 148
L R A L EM
Sbjct: 608 LCRAERWQDAEELVAEM 624
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 195/409 (47%), Gaps = 13/409 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ M + R SP V +N+L L K + LF + + L P L TYN LI+ +
Sbjct: 574 LFNRMKHDRISPT-VFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGY 632
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G F V R+ P+ +TF +L+KGL + +A + T+++ G P+
Sbjct: 633 CKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDA 692
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
FT++ L +G AL ++E + EG ++KA+E+ +
Sbjct: 693 FTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGR 752
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ + P+ V Y ++I G+ D A+ + M QG++P+ + +N ++ C+ G
Sbjct: 753 EMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGD 812
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
M+ A + ++ M GV P+ YN L+ G+ ++ +L ME G V SY
Sbjct: 813 MENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGT 872
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LIN CK ++ A + +M +G+ P+V IYN L ++E AF+ +EM + G
Sbjct: 873 LINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKG 932
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + TY T IDGL N + EA ++ + + D+ YN LI G
Sbjct: 933 IELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISG 981
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 190/397 (47%), Gaps = 12/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S +L L K K + +++F + + P + Y I K+ V G +
Sbjct: 515 PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLEL 574
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R+ +P + LI GLC ++ +A LF ++ P++ TYNTLI+G +
Sbjct: 575 FNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCK 634
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G+ + + E M + N E + G V+ A+ + +MKD+ PD T
Sbjct: 635 DGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFT 694
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
++ + G+ + + A + +D G++ N T +++++ LCK G++++A +L +
Sbjct: 695 FSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREM 754
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ PN +YNT++DG+ G + A+ +ME G +Y+ LI +C+ ++E
Sbjct: 755 AKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDME 814
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A +M KG+ P V YN L ++ ++ F L EM+ +G + +Y T I
Sbjct: 815 NAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLI 874
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ LCK S ++EA + R + ++R YN LIDG
Sbjct: 875 NCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDG 911
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 196/429 (45%), Gaps = 45/429 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F+ILF + N D L +++ +GL + YT +IL+N CK G++ +
Sbjct: 690 PDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEI 749
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
LGR + PN V + ++I G + ++ A + G +P+ YN LI
Sbjct: 750 LGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCE 809
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G A +M G +G + DK +L +M+D P+VV+
Sbjct: 810 LGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVS 869
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I C + EA+ + +M D+GV PNV +N+++D C GK+++A R + M
Sbjct: 870 YGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMF 929
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ N YNTL+DG + G++ A+++ + + G VF+Y+ LI+GY ++
Sbjct: 930 KKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQ 989
Query: 303 GALSLYGEMLSKGIK-------------------------------PDVVIYNTLFVVLF 331
++LY EM + GIK PD+++YN + +
Sbjct: 990 RCIALYEEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIFGEMSLQPDLLVYNGVLHC-Y 1048
Query: 332 EIH-QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
+H +++AF L +M + D TY + I G K + E L ++ + E +
Sbjct: 1049 AVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEA 1108
Query: 391 RAYNCLIDG 399
Y+ ++ G
Sbjct: 1109 DTYDIIVKG 1117
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 165/370 (44%), Gaps = 54/370 (14%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ ++ P V ++NIL G + +D L K + G P++ +Y LINC CK +
Sbjct: 823 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSK 882
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ +V + +PN + LI G C++ +I +A ++ G E N+ TYNT
Sbjct: 883 LLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNT 942
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
LI+GL S NG+ +A+++ L++ + + PDV TY S+I
Sbjct: 943 LIDGL-----------------SMNGKLA------EAEDMLLEISRKGLKPDVFTYNSLI 979
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD-------ELCK------------- 227
G+ +A + L EM G++P + T+++++ EL K
Sbjct: 980 SGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIFGEMSLQPDLL 1039
Query: 228 -----------NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
+G MD+A L MI+ + + YN+L+ G G++ + L M
Sbjct: 1040 VYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEM 1099
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
++ +Y I++ G+C+ K+ GA Y EM KG+ DV I + L L E +
Sbjct: 1100 KAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRS 1159
Query: 337 ERAFKLFDEM 346
+ A + EM
Sbjct: 1160 KEAENVISEM 1169
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 110/237 (46%), Gaps = 2/237 (0%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+ +A +LF +++E I P + T ++ + + + +++ +P+ +
Sbjct: 498 ISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 557
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+ K + + L + M + P F+YN L+DG C ++ A++LF M +
Sbjct: 558 AIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARR 617
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
++ +Y+ LI+GYCK+ E + + M + I+P ++ +NTL LF+ VE A
Sbjct: 618 LLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAE 677
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ EM+ G D +T+ DG N A+ ++ T + L + AY C I
Sbjct: 678 NVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYET--AVDSGLKMNAYTCSI 732
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%)
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ EA+ L + G+ P++ L+D T + +F+++ + F Y
Sbjct: 498 ISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 557
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
I K ++ L L+ M I P V IYN L L ++ Q++ A +LFDEM
Sbjct: 558 AIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARR 617
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ TY T IDG CK+ ++ ++ ++ E + +N L+ GL
Sbjct: 618 LLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGL 667
>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 874
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 193/409 (47%), Gaps = 42/409 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FN+L G L + H + LF ++ + G P+ +T+ IL+ +C+ G S G +
Sbjct: 145 PEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLEL 204
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
LG++ PN V + +LI C E + +A L K+R G P+V T+N+ I+ L
Sbjct: 205 LGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCG 264
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+G + A +F +M +D+ EL L +P+V+TY ++ GFC
Sbjct: 265 SGKILEASRIFRDMQ-----------IDE--ELGLP------HPNVITYKLMLMGFCKEG 305
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EAK L+ M N+ ++N+ + L +NGK+ EA +L M+ IG+ P+ + YN
Sbjct: 306 MLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYN 365
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+MDG C G ++ A+ L M G +YS L++GYC ++ A +L EM+S
Sbjct: 366 IVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISN 425
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
P+ N L L++ ++ A L +M G DT T I+ LC N + +A
Sbjct: 426 NCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKA 485
Query: 375 VELFR-----------------------TLRILKCELDIRAYNCLIDGL 400
+E+ T+ KC D+ Y+ +I GL
Sbjct: 486 IEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGL 534
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 183/384 (47%), Gaps = 46/384 (11%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
S+NI L +N + K + G+ PD+Y+YNI+++ CK G +S +++G +
Sbjct: 328 SYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLM 387
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+R+ P+ VT+++L+ G C++ ++ EA L ++ C PN +T N L++ L++
Sbjct: 388 IRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWK---- 443
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND--- 195
EG + +A+ L +M ++ D VT +I C
Sbjct: 444 -------------------EGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDK 484
Query: 196 --------WNEAKCLL-------IEMMDQGVQ-----PNVVTFNVIMDELCKNGKMDEAS 235
W L I ++D + P++VT++ I+ LCK G++D+A
Sbjct: 485 AIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAK 544
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+ M+ G++P++ +Y+T + FC G+++ A ++ ME GC T+ +Y+ LI G
Sbjct: 545 KKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGL 604
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
+I L EM KG+ PDV YN + L E ++ A + DEM + G++ +
Sbjct: 605 GSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNI 664
Query: 356 WTYRTFIDGLCKNSYIVEAVELFR 379
++R I CK + E+F
Sbjct: 665 SSFRILIKAFCKACDFKASHEVFE 688
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%)
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
QP++ +NV++ + +++ S L M+ V P A+ +N L+ C +G + A+E
Sbjct: 109 QPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARE 168
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
LF M + GC F++ IL+ GYC+ L L G+M + GI P+ V+YNTL
Sbjct: 169 LFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFC 228
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
+ + A KL D+M+ DG+ T+ + I LC + I+EA +FR ++I
Sbjct: 229 KEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQI 280
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 114/248 (45%), Gaps = 6/248 (2%)
Query: 159 GFVDKAKELFLQMKDE--NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
GF +KA F ++ P + Y +++ N L +M+ V P
Sbjct: 89 GFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAY 148
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
TFN+++ LC +G +++A L D M G PN F + L+ G+C G ++ EL M
Sbjct: 149 TFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQM 208
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
+MG Y+ LI+ +CK + A L +M G+ P V +N+ L ++
Sbjct: 209 RTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKI 268
Query: 337 ERAFKLFDEMQRD---GVA-ADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
A ++F +MQ D G+ + TY+ + G CK + EA L T++ +++ +
Sbjct: 269 LEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLES 328
Query: 393 YNCLIDGL 400
YN + GL
Sbjct: 329 YNIWLLGL 336
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 133/286 (46%), Gaps = 27/286 (9%)
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINP 178
+P+++ YN L+ R E V+ L+ M ++P
Sbjct: 109 QPSIYLYNVLLKSCIR-----------------------ENRVELVSWLYKDMVLARVSP 145
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
+ T+ +I C + +A+ L +M +G +PN TF +++ C+ G + LL
Sbjct: 146 EAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELL 205
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
M +G+ PN +YNTL+ FC G+ + A++L M G V +++ I+ C +
Sbjct: 206 GQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGS 265
Query: 299 KEIEGALSLYGEML---SKGI-KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
+I A ++ +M G+ P+V+ Y + + + +E A L D M+R+ +
Sbjct: 266 GKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFIN 325
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+Y ++ GL +N ++EA + + + + E DI +YN ++DGL
Sbjct: 326 LESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGL 371
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 134/306 (43%), Gaps = 26/306 (8%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D ++ + P + +++ + L K D F + S GL PD Y+ I+ F
Sbjct: 510 LVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSF 569
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ G++S F VL + + T+ SLI GL ++++I E L ++R G P+V
Sbjct: 570 CREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDV 629
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TYN ++N L G ++ A + +M + I+P++ +
Sbjct: 630 CTYNHMLNCLCEGGR-----------------------INDAPSVLDEMLQKGISPNISS 666
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ +I+ FC A D+ +A + E+ + ++ +EL GK+ EA L + +
Sbjct: 667 FRILIKAFCKACDF-KASHEVFEIALNVCGHKEALYTLMFNELLVGGKVAEAKELFETAL 725
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK--NKE 300
F+Y L+D C ++ A ++ + G S+ +I+G+ K NK
Sbjct: 726 DRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKH 785
Query: 301 IEGALS 306
+ L+
Sbjct: 786 VADELA 791
>gi|302757523|ref|XP_002962185.1| hypothetical protein SELMODRAFT_77345 [Selaginella moellendorffii]
gi|300170844|gb|EFJ37445.1| hypothetical protein SELMODRAFT_77345 [Selaginella moellendorffii]
Length = 442
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 190/391 (48%), Gaps = 10/391 (2%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++ + L K D ++ F+R+ + PDL T+ ++I CK G+++ V
Sbjct: 9 VVAYTAIINALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQ 68
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ R + P+ + +TSL+ GL S + EA L ++ G +P TY + I+GL + G
Sbjct: 69 EMNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNG 128
Query: 137 HTIVALNLFEEMASGN---------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
A L EM G + +EG +++A L +M + + DV YT++I
Sbjct: 129 RVEEAGKLVREMGKMCAAEVLHCIFGGYVLEGKIEEALALKDEMVKKGVTLDVRCYTNLI 188
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
G Y +EA+ + M+ QG P+ T+ +I+ CK GKM A +++++M G+
Sbjct: 189 HGLFYVRRNDEAQEMFEAMVQQGYVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLE 248
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
N +YN+LMDGF R A ++ +M ++ +Y+IL+ G CK + A +
Sbjct: 249 ANCHIYNSLMDGFLGVNRAREAINVYDTMLRKMVMPSIVTYNILMLGLCKLGQTADARLV 308
Query: 308 YGEMLSK-GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
EM + GI P +V Y TL L + + + A +F EM +GV D + + I L
Sbjct: 309 LREMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALA 368
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ EA +L R + + D AYN L+
Sbjct: 369 MADRMDEATQLLRDMPRMGITPDALAYNALV 399
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 125/278 (44%), Gaps = 26/278 (9%)
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
V Y +IN L++ A+ FE M + +PD+
Sbjct: 9 VVAYTAIINALFKAHRPDQAIACFERMVA-----------------------RKCDPDLR 45
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
T+T VI G C A N A + EM +G +P+++ + ++D L K MDEA +LL +
Sbjct: 46 TFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEI 105
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G++P Y + + G C GRV A +L M M C V + GY +I
Sbjct: 106 VSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREMGKM-CAAEVLH--CIFGGYVLEGKI 162
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E AL+L EM+ KG+ DV Y L LF + + + A ++F+ M + G DT TY
Sbjct: 163 EEALALKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVQQGYVPDTRTYGMI 222
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ CK + A ++ + E + YN L+DG
Sbjct: 223 VSHFCKQGKMQAACKVVEIMDAAGLEANCHIYNSLMDG 260
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 151/313 (48%), Gaps = 26/313 (8%)
Query: 88 VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
V +T++I L R +A A F ++ C+P++ T+ +I GL + G
Sbjct: 10 VAYTAIINALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGK---------- 59
Query: 148 MASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
+++A E+F +M + PD++ YTS++ G A+ +EA+ LL E++
Sbjct: 60 -------------LNRACEVFQEMNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIV 106
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+G++P VT+ + LCKNG+++EA +L+ ++G A V + + G+ L G++
Sbjct: 107 SRGMKPTEVTYTSFISGLCKNGRVEEAGKLVR---EMGKMCAAEVLHCIFGGYVLEGKIE 163
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A L M G T V Y+ LI+G + + A ++ M+ +G PD Y +
Sbjct: 164 EALALKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVQQGYVPDTRTYGMIV 223
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
+ +++ A K+ + M G+ A+ Y + +DG + EA+ ++ T+
Sbjct: 224 SHFCKQGKMQAACKVVEIMDAAGLEANCHIYNSLMDGFLGVNRAREAINVYDTMLRKMVM 283
Query: 388 LDIRAYNCLIDGL 400
I YN L+ GL
Sbjct: 284 PSIVTYNILMLGL 296
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 125/278 (44%), Gaps = 23/278 (8%)
Query: 18 CSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGR 77
C N++ G L + D +F+ + G PD TY ++++ FCK G++ V+
Sbjct: 183 CYTNLIHG-LFYVRRNDEAQEMFEAMVQQGYVPDTRTYGMIVSHFCKQGKMQAACKVVEI 241
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
+ + N + SL+ G +R EA ++ + P++ TYN L+ GL + G
Sbjct: 242 MDAAGLEANCHIYNSLMDGFLGVNRAREAINVYDTMLRKMVMPSIVTYNILMLGLCKLGQ 301
Query: 138 TIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
T A + EM +G I P +V+Y ++I G A +
Sbjct: 302 TADARLVLREMRERDG----------------------IVPTIVSYRTLIHGLGKAGRAD 339
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
EA + EM+D GV P+ + ++ L +MDEA++LL M ++G+ P+A YN L+
Sbjct: 340 EAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNALV 399
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
C +V A ++ V M C ++ + G+
Sbjct: 400 KVLCGGAKVGPAWDVLVEMMDNSCVPDGSTFRAMKLGF 437
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 78/189 (41%), Gaps = 25/189 (13%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAK-NKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
++D ML + P + ++NIL L K + D L L + G+ P + +Y LI+
Sbjct: 273 VYDTMLR-KMVMPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHG 331
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
K GR V ++ + P+ + TSLI+ L R+ EA L + G P+
Sbjct: 332 LGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPD 391
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
YN L+ L G + G A ++ ++M D + PD
Sbjct: 392 ALAYNALVKVL-----------------CGGAKVG------PAWDVLVEMMDNSCVPDGS 428
Query: 182 TYTSVIRGF 190
T+ ++ GF
Sbjct: 429 TFRAMKLGF 437
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%)
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
VV Y + LF+ H+ ++A F+ M D T+ I GLCK + A E+F+
Sbjct: 9 VVAYTAIINALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQ 68
Query: 380 TLRILKCELDIRAYNCLIDGL 400
+ + DI Y L+DGL
Sbjct: 69 EMNRKGWKPDIIVYTSLVDGL 89
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 192/412 (46%), Gaps = 27/412 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +N +F L L+L+ R+ S+G P+ TY +L++ CK G +
Sbjct: 177 PTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKM 236
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+L P+ +T L+ LC E RI +A L ++ GC P+ TY ++GL +
Sbjct: 237 FDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCK 296
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
G A + FE + G G+ G+ D+ + +M ++I+PD+
Sbjct: 297 AGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITL 356
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT +IR F A +A LL EM D+G P+ +N ++ L G +D A L+ M+
Sbjct: 357 YTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEML 416
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q V ++ +N ++ G C G +++A ++F M GC TV +Y+ LI+G + +E
Sbjct: 417 QNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLE 476
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFV--------------VLFEIHQVERAFKLFDEMQR 348
A L+ +M G P + + TL + + QV +A+KL +
Sbjct: 477 EARMLFHKM-EMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIE 535
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GV D TY T I+GLCK + A+ LF+ L++ D Y LIDGL
Sbjct: 536 SGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGL 587
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 149/329 (45%), Gaps = 13/329 (3%)
Query: 84 TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALN 143
P+A F +L+ + R EA F+++ F C P F YN + L G ++AL
Sbjct: 142 APSA-AFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALA 200
Query: 144 LFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
L+ M S G A ++F +M + I PDV YT ++ C
Sbjct: 201 LYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLC 260
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
+A LL M + G P+ VT+ V + LCK G++DEA +L+ G
Sbjct: 261 NEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLI 320
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
Y+ L+DG GR + + M + + Y+ILI + + + A L EM
Sbjct: 321 GYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEM 380
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
KG PD YNTL LF++ ++RA L EM ++ V D+ T+ I GLCK I
Sbjct: 381 KDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLI 440
Query: 372 VEAVELFRTLRILKCELDIRAYNCLIDGL 400
+A+++F + C + YN LIDGL
Sbjct: 441 DKAMQVFDEMGEHGCHPTVMTYNALIDGL 469
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 172/371 (46%), Gaps = 17/371 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + IL A+ L + G PD + YN L+ +G + +
Sbjct: 352 PDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSL 411
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ +L++ ++ T +I GLC + I +A +F ++ GC P V TYN LI+GLYR
Sbjct: 412 MSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYR 471
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMK-DENINPDVVTYTSVIRGFCYA 193
G A LF +M GN LFL++ N D + ++ G C +
Sbjct: 472 AGMLEEARMLFHKMEMGNN-----------PSLFLRLTLGANQVRDTESLRKLVDGMCQS 520
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+A LL +++ GV P+VVT+N +++ LCK +D A RL + G+ P+ Y
Sbjct: 521 GQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITY 580
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
TL+DG R N A LF ++ G ++ Y+ ++ C+ K++ A++L+ + L
Sbjct: 581 GTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLP 640
Query: 314 K--GIKP-DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
K + P D VI N FE ++ K ++ + + + Y ++ GLC+
Sbjct: 641 KKYNLSPEDEVIANARKC--FEDGFLDETVKELIKIDQVYGSLNPNPYTIWVIGLCQVRK 698
Query: 371 IVEAVELFRTL 381
I +A+ +F L
Sbjct: 699 IDDALRIFHIL 709
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 139/345 (40%), Gaps = 72/345 (20%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+ NI+ L K D + +F + G P + TYN LI+ + G + ++ ++
Sbjct: 426 THNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKM 485
Query: 79 ---------LRSCFTPNAV----TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
LR N V + L+ G+C ++++A L + G P+V TY
Sbjct: 486 EMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTY 545
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
NTLINGL + + AL LF+E LQ+K I+PD +TY +
Sbjct: 546 NTLINGLCKAKNLDGALRLFKE---------------------LQLK--GISPDEITYGT 582
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK------------------ 227
+I G A+ N+A L ++ G P++ +N +M LC+
Sbjct: 583 LIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKK 642
Query: 228 ------------------NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
+G +DE + L + Q+ N Y + G C +++ A
Sbjct: 643 YNLSPEDEVIANARKCFEDGFLDETVKELIKIDQVYGSLNPNPYTIWVIGLCQVRKIDDA 702
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+F +E G T ++LIN C ++ + A+ + LSK
Sbjct: 703 LRIFHILEEFGIVVTPACCALLINYLCWDRNLNAAVDIMMYTLSK 747
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 61/156 (39%)
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G+ + + L+ GR A E F M C T F Y+ + I A
Sbjct: 139 GLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLA 198
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L+LY M+S G P+ Y L L + A K+FDEM G+ D Y +
Sbjct: 199 LALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSS 258
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LC I +A L +++ C D Y + GL
Sbjct: 259 LCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGL 294
>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 660
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 182/376 (48%), Gaps = 12/376 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + NI CL K L + +++ G PD+ TY ++ C C R S +
Sbjct: 258 PDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGL 317
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ P+ V +LI GLC S++ EA L +++ E +V YN LI+G +R
Sbjct: 318 WEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWR 377
Query: 135 TGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKDENINPDVVT 182
G A + M + E GV G ++KA+ L +M+ +NPD +
Sbjct: 378 AGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYS 437
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++G C + ++A + + M+ G ++V+ N+++D CK K+ A L M
Sbjct: 438 YNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMD 497
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G++ +A Y TL++G G N A+ELF M V Y+I+++ CK +++
Sbjct: 498 YKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLK 557
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A ++ M+ K I PD+V YNTL L + + A LF +M+ GV D+ T++ I
Sbjct: 558 RAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFKYLI 617
Query: 363 DGLCKNSYIVEAVELF 378
+GL A E++
Sbjct: 618 NGLLDEGRSTLAYEVW 633
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 191/417 (45%), Gaps = 58/417 (13%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+++ L ++ + V L ++ G PD++ NI I+C CK R+ ++ ++
Sbjct: 227 TYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKM 286
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
P+ VT+T+++ LC R EA L+ ++ G +P+V LI GL +
Sbjct: 287 RGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSK- 345
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
V++A EL +M NI V Y ++I GF A ++
Sbjct: 346 ----------------------VEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDK 383
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A ++ M G +P VVT+N++++ C G M++A L+ M GV P+ + YN L+
Sbjct: 384 AYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLK 443
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G C T ++++A +G + S +ILI+ +CK K+++ AL L+ EM KG++
Sbjct: 444 GLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQA 503
Query: 319 DVVIYNTLFVVLF-----------------------------------EIHQVERAFKLF 343
D V Y TL LF ++ ++RA K+F
Sbjct: 504 DAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIF 563
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
M + + D TY T I L KNS +EA++LF+ +R E D + LI+GL
Sbjct: 564 LHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFKYLINGL 620
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 175/386 (45%), Gaps = 33/386 (8%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYN-----ILINCFCKMGRVSHGFVV 74
+ IL + +D+V+ F + +G YN ++ NC + +G +
Sbjct: 158 YRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIGVLIKNCCFDLVEKYYGMAL 217
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ C TP T++ I LC +RI L + FG P+++ N I+ L +
Sbjct: 218 SKGL---CLTP--FTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCK 272
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
AL + E+M G G PDVVTYT+V+ C
Sbjct: 273 QNRLHDALQMVEKM-RGKGTI----------------------PDVVTYTTVVGCLCNNK 309
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
++EA L EM+ G++P+VV ++ LCKN K++EA L M+ + + + +YN
Sbjct: 310 RFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYN 369
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ GF G +++A + M + GC V +Y+IL+N YC +E A +L +M +
Sbjct: 370 ALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETS 429
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+ PD YN L L + HQ+++AF + G D + ID CK + A
Sbjct: 430 GVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSA 489
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ELF+ + + D Y LI+GL
Sbjct: 490 LELFKEMDYKGMQADAVTYGTLINGL 515
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 146/363 (40%), Gaps = 47/363 (12%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + GCL NK + + L++ + GL PD+ LI CK +V F +
Sbjct: 293 PDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFEL 352
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R+L + + +LI G I +A + + +R GCEP V TYN L+N
Sbjct: 353 ASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCT 412
Query: 135 TGHTIVALNLFEEMASG-----------------------------NGEFGVEGFVD--- 162
G A NL +M + + V GF D
Sbjct: 413 IGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVS 472
Query: 163 ---------------KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
A ELF +M + + D VTY ++I G +N A+ L +M+
Sbjct: 473 CNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQML 532
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+ PNV +N+++ LCK G + A ++ MIQ + P+ YNTL+ R
Sbjct: 533 KAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAM 592
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A +LF M + G ++ LING A ++ M+ GI D + L
Sbjct: 593 EALDLFKDMRTKGVEPDSLTFKYLINGLLDEGRSTLAYEVWEYMMENGIILDREVSERLI 652
Query: 328 VVL 330
VL
Sbjct: 653 SVL 655
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 90/226 (39%), Gaps = 35/226 (15%)
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP-------------------- 248
QGV + + +++ + GK D D M+ G R
Sbjct: 149 QGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIGVLIKNCCFDL 208
Query: 249 ---------------NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
F Y+ + C + R+ +EL M+ G + +++ +I I+
Sbjct: 209 VEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYID 268
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
CK + AL + +M KG PDVV Y T+ L + A L++EM + G+
Sbjct: 269 CLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKP 328
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
D I GLCKNS + EA EL + L EL + YN LI G
Sbjct: 329 DVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISG 374
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 93/235 (39%), Gaps = 16/235 (6%)
Query: 169 LQMKDENINPDVVTYTSVIRGFCYAND------WNEAKCLLIEMMDQGVQPNVVTFNVIM 222
L+ D ++P VV V+RG + W E++ G + I+
Sbjct: 78 LERLDIELDPFVVNL--VVRGLSDSETAVRFYWWAESR--------PGFDHSQFAIAYIV 127
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
L +G S L + GV + +Y L+ G+ G+ + F M GC
Sbjct: 128 SLLFVDGNFALLSEFLGTVRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGCR 187
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
Y+ I KN + YG LSKG+ Y+ L + +++E +L
Sbjct: 188 EFGIDYNRYIGVLIKNCCFDLVEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEEL 247
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+M R G + D W +ID LCK + + +A+++ +R D+ Y ++
Sbjct: 248 LADMDRFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVV 302
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 194/405 (47%), Gaps = 30/405 (7%)
Query: 1 FCI--FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLF-PDLYTYNI 57
FC+ F M+ V S ++ L + + L + G+ P+++TYN
Sbjct: 198 FCVRFFHRMVESNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNT 257
Query: 58 LINCFCKMGRVSHGFV--VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV 115
L+N + +GR V +L + + + T++ LI+ + I EA +F ++R
Sbjct: 258 LLNAY--VGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMRE 315
Query: 116 FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDEN 175
E +V+ Y+++I+ R G+ A LF+EM+ +
Sbjct: 316 KNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQ-----------------------RD 352
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
I P+ TY ++I G C A A+ LL+EM +GV N+V FN MD C+ GKMDEA
Sbjct: 353 IVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEAL 412
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
RL +M + G+ + F YN L +G C R + AK + SM G V ++++ I Y
Sbjct: 413 RLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIY 472
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
CK + A L+ +M KG P+++ YNTL + +V++A K+ EM G+ D
Sbjct: 473 CKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDL 532
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+TY + I G C + EA++LF +R+ ++ Y +I GL
Sbjct: 533 YTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGL 577
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 178/351 (50%), Gaps = 23/351 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +++IL + + + +F+ + + D+Y Y+ +I+ ++G + F +
Sbjct: 287 VATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFD 346
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ + PNA T+ +LI G+C ++ A L +++ G + N+ +NT ++G R G
Sbjct: 347 EMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRG 406
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+D+A L M+ + IN DV TY + G C + +
Sbjct: 407 K-----------------------MDEALRLQAIMEKKGINADVFTYNILANGLCKLHRY 443
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+EAKC+L M+++GV+PNVVTF + ++ CK G + EA RL M + G PN YNTL
Sbjct: 444 DEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTL 503
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+D +C +V +A ++ M + G +++YS LI+G C ++ AL L+ EM KGI
Sbjct: 504 IDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGI 563
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
+V Y ++ L + + + AFKL+DEM + G+ D + + + K
Sbjct: 564 TRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHK 614
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N L K + + + + GL PDLYTY+ LI+ C +GRV +
Sbjct: 495 PNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKL 554
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ T N T+TS+I GL E R EA L+ ++ G P+ + +L+ ++
Sbjct: 555 FNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHK 614
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 202/409 (49%), Gaps = 13/409 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINC 61
+FD M R P V +NIL K +++RL ++P++ +YN++IN
Sbjct: 181 LFDEMPE-RGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMING 239
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK G+ F + R+ ++ + T+++LI GLC + A ++ ++ G P+
Sbjct: 240 LCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPD 299
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE-----------GFVDKAKELFLQ 170
V YNT++NG R G L L++ M V VD+A ++
Sbjct: 300 VVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWEL 359
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ +++ D +TY ++ G C N+A +L E + + ++ +++ LC+ G+
Sbjct: 360 LPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGR 419
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+DE + +LD M + G +PN +V N +++GF ++ A F +M S GC TV +Y+
Sbjct: 420 LDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNT 479
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LING K + A +L EML KG KP+++ Y+ L L + +++ A L+ + G
Sbjct: 480 LINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG 539
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
D + I GLC + + +A++L+ ++ C ++ +N L++G
Sbjct: 540 FKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEG 588
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 184/369 (49%), Gaps = 13/369 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+++ L L + + D ++K + G+ PD+ YN ++N + + GR+ + L ++
Sbjct: 267 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEE-CLELWKV 325
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ V++ LI+GL +++ EA +++ L C + TY L++GL + G+
Sbjct: 326 MEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYL 385
Query: 139 IVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSV 186
AL++ EE +G G+ EG +D+ + QM P+ +V
Sbjct: 386 NKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAV 445
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I GF A+ +A M+ +G P VVT+N +++ L K + EA L+ M+Q G
Sbjct: 446 INGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGW 505
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+PN Y+ LM+G C +++ A L+ G V ++I+I+G C + ++E AL
Sbjct: 506 KPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQ 565
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
LY EM + P++V +NTL +++ ERA K++D + + G+ D +Y + GLC
Sbjct: 566 LYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLC 625
Query: 367 KNSYIVEAV 375
I +AV
Sbjct: 626 SCHRISDAV 634
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 170/348 (48%), Gaps = 23/348 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V S+NIL L +N D +S+++ L D TY +L++ CK G ++ +L
Sbjct: 334 VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILE 393
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ ++S+I GLC E R+ E A + ++ GC+PN + N +ING R
Sbjct: 394 EAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRAS 453
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
AL F M S G F P VVTY ++I G A +
Sbjct: 454 KLEDALRFFGNMVS-KGCF----------------------PTVVTYNTLINGLSKAERF 490
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+EA L+ EM+ +G +PN++T++++M+ LC+ K+D A L ++ G +P+ ++N +
Sbjct: 491 SEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNII 550
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ G C +G+V A +L+ M+ C + +++ L+ G+ K ++ E A ++ +L G+
Sbjct: 551 IHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGL 610
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
+PD++ YN L H++ A ++ GV T+ + G
Sbjct: 611 QPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQG 658
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 120/480 (25%), Positives = 205/480 (42%), Gaps = 82/480 (17%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF M + P + S+N L L ++ +D S F + GL P+L TYNILI
Sbjct: 75 IFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKIS 134
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ + +L + F+P+ ++ +LI L + +A LF ++ G P+V
Sbjct: 135 CRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDV 194
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG--------VEGF-----VDKAKELFL 169
YN LI+G ++ G + A ++E + G + + G D++ E++
Sbjct: 195 ACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWH 254
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD------ 223
+MK D+ TY+++I G C + + + A + EM + GV P+VV +N +++
Sbjct: 255 RMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAG 314
Query: 224 ------ELCK----------------------NGKMDEASRLLDLMIQIGVRPNAFVYNT 255
EL K N K+DEA + +L+ + ++ Y
Sbjct: 315 RIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGV 374
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN----------------- 298
L+ G C G +N+A + E+ F+YS +ING C+
Sbjct: 375 LVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHG 434
Query: 299 ------------------KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
++E AL +G M+SKG P VV YNTL L + + A+
Sbjct: 435 CKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAY 494
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
L EM + G + TY ++GLC+ + A+ L+ + D++ +N +I GL
Sbjct: 495 ALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGL 554
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 12/289 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ +L L KN + + LS+ + + D + Y+ +IN C+ GR+ VL ++
Sbjct: 371 TYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQM 430
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ PN ++I G S++ +A F + GC P V TYNTLINGL +
Sbjct: 431 TKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERF 490
Query: 139 IVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSV 186
A L +EM + + + +D A L+ Q ++ PDV + +
Sbjct: 491 SEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNII 550
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G C + +A L EM + PN+VT N +M+ K + AS++ D ++Q G+
Sbjct: 551 IHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGL 610
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+P+ YN + G C R++ A G T +++IL+ GY
Sbjct: 611 QPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGY 659
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 153/321 (47%), Gaps = 20/321 (6%)
Query: 84 TPNAVTFTSLIKGLCAESRIMEAAALF---TKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
P +++ +IK L +E A ++F T+ + P VF H I+
Sbjct: 4 APKSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVF-------------HHIL 50
Query: 141 ALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDE-NINPDVVTYTSVIRGFCYANDWNEA 199
LF+ + + D+A ++F +M + P + +Y S++ +N W+EA
Sbjct: 51 K-RLFDPKLVAHA-YAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEA 108
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
+ + G+ PN+ T+N+++ C+ + D+A LL+ M G P+ F Y TL++
Sbjct: 109 ESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINS 168
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS-KGIKP 318
G ++ A +LF M G T V Y+ILI+G+ K +I A ++ +L + P
Sbjct: 169 LAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYP 228
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
++ YN + L + + + +F+++ M+++ D +TY T I GLC + + A ++
Sbjct: 229 NIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVY 288
Query: 379 RTLRILKCELDIRAYNCLIDG 399
+ + D+ YN +++G
Sbjct: 289 KEMAENGVSPDVVVYNTMLNG 309
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 104/209 (49%), Gaps = 23/209 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L+K + + +L K + G P++ TY++L+N C+ ++ +
Sbjct: 472 PTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNL 531
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ L F P+ +I GLC+ ++ +A L+++++ C PN+ T+NTL+ G Y+
Sbjct: 532 WCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYK 591
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
V F ++A +++ + + PD+++Y ++G C +
Sbjct: 592 ----------------------VRDF-ERASKIWDHILQYGLQPDIISYNITLKGLCSCH 628
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
++A L + +D+GV P +T+N+++
Sbjct: 629 RISDAVGFLNDAVDRGVLPTAITWNILVQ 657
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 50/117 (42%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V NI+ L + + L L+ + P+L T+N L+ F K+ +
Sbjct: 542 PDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKI 601
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
IL+ P+ +++ +KGLC+ RI +A G P T+N L+ G
Sbjct: 602 WDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQG 658
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + N L K + ++ ++ + GL PD+ +YNI + C R+S
Sbjct: 577 PNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGF 636
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIME 105
L + P A+T+ L++G A ME
Sbjct: 637 LNDAVDRGVLPTAITWNILVQGYLALKGYME 667
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 170/358 (47%), Gaps = 12/358 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+N L C + K V L + + + G+ + TY IL++ G +S V+ +
Sbjct: 170 YNSLLDCYVRRKDDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMK 229
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+ +T++I C + A+ +F + G EPN TY LING + G
Sbjct: 230 AKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQME 289
Query: 140 VALNLFEEM-ASGNGEFGV-----------EGFVDKAKELFLQMKDENINPDVVTYTSVI 187
A L +M G G + +G VD A ++ M+ I DV TY ++
Sbjct: 290 AAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLA 349
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
G C N EAK LL M+++GV PN VT+ ++ CK G M EA RL M G
Sbjct: 350 CGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAM 409
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P+ YN +MDG+ G + A+ ME G V++Y+ L++G+C N +++ AL L
Sbjct: 410 PSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKL 469
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
+ EM +G +P+VV Y L L + + E AF+L+D+M + G+ D Y + L
Sbjct: 470 FEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSL 527
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 163/357 (45%), Gaps = 12/357 (3%)
Query: 56 NILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV 115
+++++ FCK GRV +L + R NA+ + SL+ L +
Sbjct: 136 SVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMEN 195
Query: 116 FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDK 163
G E V TY L++ L G + +EM + N V G V +
Sbjct: 196 GGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRR 255
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
A E+F + I P+ TY +I GFC A+ LL +M +GV N + FN ++D
Sbjct: 256 ASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMID 315
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
C+ G +D A ++ M ++G+ + + YNTL G C R+ AK L M G
Sbjct: 316 GYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPP 375
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
+Y+ LI+ +CK ++ A L+ EM KG P VV YN + + + A +
Sbjct: 376 NYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFR 435
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
EM++ G+ D +TY + + G C N + A++LF ++ E ++ AY LI GL
Sbjct: 436 KEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGL 492
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 128/275 (46%), Gaps = 15/275 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ +L K + L + G+ + +N +I+ +C+ G V + V
Sbjct: 270 PNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKV 329
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + + T+ +L GLC +R+ EA L + G PN TY TLI+ +
Sbjct: 330 KAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCK 389
Query: 135 TGHTIVALNLFEEMASGNGEFG--------VEGFVDK-----AKELFLQMKDENINPDVV 181
G + A LF EMA G G ++G++ K A+ +M+ + + PDV
Sbjct: 390 EGDMVEARRLFREMA-GKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVY 448
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TY S++ G C + A L EM +G +PNVV + ++ L K G+ +EA +L D M
Sbjct: 449 TYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDM 508
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVN-RAKELFVS 275
++ G+ P+ +Y+ L+ R + K++ VS
Sbjct: 509 LKAGLTPDDSLYSALVGSLHTDNRKDIHHKQIKVS 543
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP ++ L K LF+ + G P + TYN++++ + K G +
Sbjct: 374 PPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAER 433
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ + P+ T+ SL+ G C ++ A LF +++ G EPNV Y LI+GL
Sbjct: 434 FRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLA 493
Query: 134 RTGHTIVALNLFEEM 148
+ G + A L+++M
Sbjct: 494 KEGRSEEAFQLYDDM 508
>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
Length = 688
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/389 (31%), Positives = 183/389 (47%), Gaps = 17/389 (4%)
Query: 26 CLAKNKHYDTV----LSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRS 81
C A++ DT LS F+ + S G+ PD+ N ++ R V +L+
Sbjct: 139 CKARDATLDTCSTLCLSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQL 198
Query: 82 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGCEPNVFTYNTLINGLYRTGHTI 139
P+ VT+ +L+ E R + A L ++ R GC PN TYN +I GL R G
Sbjct: 199 GIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLE 258
Query: 140 VALNLFEEM--ASGNGEFG---------VEGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
A L E M + F G V K +L L+M++E I P VVTY ++I
Sbjct: 259 EAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIH 318
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
G + A+ EM G+ P+V+T+N +++ CK G + EA L + + G+ P
Sbjct: 319 GLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAP 378
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
YN +DG+C G + A+ L M GC V +Y+IL+ G + A +
Sbjct: 379 TVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFF 438
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
EMLSKG++PD YNT + + RA +L + + +G+++DT TY I GLCK
Sbjct: 439 DEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKT 498
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ +A EL + + D Y CLI
Sbjct: 499 GNLKDAKELQMKMVSNGLQPDCITYTCLI 527
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 184/399 (46%), Gaps = 25/399 (6%)
Query: 3 IFDYMLNMRPSP--PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
++D L M P V ++N + L ++ + F + + GL PD+ TYN L+N
Sbjct: 294 VYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLN 353
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+CK G + ++ G + R+ P +T+ I G C + EA L ++ GC P
Sbjct: 354 GYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLP 413
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
NV TY L+ G +LN+ + A+E F +M + + PD
Sbjct: 414 NVCTYTILMKG---------SLNVCS--------------LAMAREFFDEMLSKGLQPDC 450
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
Y + I D A L +M +G+ + VT+N+++ LCK G + +A L
Sbjct: 451 FAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMK 510
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M+ G++P+ Y L+ C G + A+++F +M S G + +++++I+ YC+
Sbjct: 511 MVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGN 570
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ A + +ML +G++P+ + YN L L + + + A F EM G+ A+ +TY
Sbjct: 571 LYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTL 630
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
IDG CK +A+ + + D + L+ G
Sbjct: 631 LIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKG 669
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 181/401 (45%), Gaps = 17/401 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNS--TGLFPDLYTYNILINCFCKMGRVSHGF 72
P + ++N L K D V L K + + +G P+ TYN++I + G +
Sbjct: 202 PSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEA- 260
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
L +R ++ T+ LI GL A + + L ++ G P V TYN +I+GL
Sbjct: 261 AELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGL 320
Query: 133 YRTGHTIVALNLFEEM-ASG------------NGEFGVEGFVDKAKELFLQMKDENINPD 179
++G A F EM A G NG + G + +A LF ++ + P
Sbjct: 321 LQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNG-YCKAGNLKEALLLFGDLRRAGLAPT 379
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
V+TY I G+C D EA+ L EM +QG PNV T+ ++M + A D
Sbjct: 380 VLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFD 439
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M+ G++P+ F YNT + + G + RA EL + G + +Y+ILI+G CK
Sbjct: 440 EMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTG 499
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++ A L +M+S G++PD + Y L E + A K+F+ M DG+ T+
Sbjct: 500 NLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFT 559
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I C+ + A FR + E + YN LI L
Sbjct: 560 VIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHAL 600
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 140/329 (42%), Gaps = 49/329 (14%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L K + L LF L GL P + TYNI I+ +C++G + ++
Sbjct: 343 PDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARIL 402
Query: 75 LGRILRSCFTPNAVTFTSLIKG--------------------------------LCAE-- 100
+ PN T+T L+KG +CAE
Sbjct: 403 KEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELI 462
Query: 101 -SRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG------ 153
I A L L + G + TYN LI+GL +TG+ A L +M S NG
Sbjct: 463 LGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVS-NGLQPDCI 521
Query: 154 -------EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
G + +A+++F M + + P VT+T +I +C + A +M
Sbjct: 522 TYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKM 581
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+++GV+PN +T+NV++ LC+ G+ AS M++ G+ N + Y L+DG C G
Sbjct: 582 LEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNW 641
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGY 295
A + M G ++ L+ G+
Sbjct: 642 EDAMRFYFEMHQNGIHPDYLTHKALVKGF 670
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 188/390 (48%), Gaps = 31/390 (7%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FN L K + + +F + S G+ P + T+N L+ K GR + V +L
Sbjct: 159 FNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEML 218
Query: 80 RS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ TP+ TF LI+G C S + E F ++ F C+P++ TYNTL++GL R G
Sbjct: 219 STYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKV 278
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+A N+ V G V K+ N+NPDVVTYT+++RG+C ++ +E
Sbjct: 279 NIAHNV------------VNGMVKKST---------NLNPDVVTYTTLVRGYCMKHEIDE 317
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI-QIGVRPNAFVYNTLM 257
A + EM+ +G++PN +T+N ++ LC+ K+D+ ++ + + G P+ NTLM
Sbjct: 318 ALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLM 377
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK--- 314
+ C G +N A E+F M + +YS+LI C+ E A L+ E+ K
Sbjct: 378 NAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEIL 437
Query: 315 ----GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
G P V Y ++F L + +A ++F ++ + G D +++ I G C+
Sbjct: 438 LRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGT-QDPLSFKILIKGHCREGT 496
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
EL + D+ Y LIDGL
Sbjct: 497 FEAGYELLVLMLRRDFVPDLETYQSLIDGL 526
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 171/373 (45%), Gaps = 32/373 (8%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
+FD ML+ P +FNIL KN D FK ++ PDL TYN L++
Sbjct: 212 SVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDG 271
Query: 62 FCKMGRVSHGF-VVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 119
C+ G+V+ VV G + +S P+ VT+T+L++G C + I EA +F ++ G +
Sbjct: 272 LCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLK 331
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPD 179
PN TYNTLI GL +FE G G GF+ PD
Sbjct: 332 PNEITYNTLIKGLCEVQKIDKIKQIFE------GALGGGGFI----------------PD 369
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
T +++ C A + N+A + +MM V+P+ T++V++ LC+ G + A +L D
Sbjct: 370 TCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFD 429
Query: 240 -------LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
L+ G P Y ++ + C G+ +A+ +F + G T S+ ILI
Sbjct: 430 ELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRG-TQDPLSFKILI 488
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
G+C+ E L ML + PD+ Y +L L + + A++ ++M +
Sbjct: 489 KGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHV 548
Query: 353 ADTWTYRTFIDGL 365
+T T+ + + L
Sbjct: 549 PETSTFHSILARL 561
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 174/444 (39%), Gaps = 63/444 (14%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFK-RLNSTGLFPDLYTYNILI 59
+F+ M++ P + ++N L L + + D + +F+ L G PD T N L+
Sbjct: 319 LVVFEEMVSKGLKPNEI-TYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLM 377
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL------ 113
N C G ++ V +++ P++ T++ LI+ LC A LF +L
Sbjct: 378 NAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEIL 437
Query: 114 -RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE-MASGNGE---FGV-------EGFV 161
R GC P V Y ++ L R G T A +F + M G + F + EG
Sbjct: 438 LRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQDPLSFKILIKGHCREGTF 497
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
+ EL + M + PD+ TY S+I G + A L +M+ P TF+ I
Sbjct: 498 EAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSI 557
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL--------- 272
+ L G E++R + LM++ +R N + + +G ++A ++
Sbjct: 558 LARLLAKGCAHESARFIMLMLEGKIRQNINLSTHTVRLLFGSGLRDKAFKIVGLLYANGY 617
Query: 273 FVSMESM--GCTHT---VFSYSIL------------------INGYCKNKEIEGALSLYG 309
V ME + +H + ++ +L I G CK K A LY
Sbjct: 618 VVDMEELIGFLSHNRKFLLAHKLLLFCLEKHQNVDIDMCDTVIEGLCKMKRHSEAFGLYY 677
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD----------TWTYR 359
E++ KG + L V L ++E K + + D W R
Sbjct: 678 ELVEKGNNQPLRCLENLRVALEARGRLEEV-KFLSKRMPNKRQPDKYLELPHWNWKWAIR 736
Query: 360 TFIDGLCKNSYIVEAVELFRTLRI 383
F NS ++E+ +F L +
Sbjct: 737 YFRMQTATNSRMIESFTIFNGLPV 760
>gi|357499665|ref|XP_003620121.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495136|gb|AES76339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 408
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 172/356 (48%), Gaps = 51/356 (14%)
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN---------- 126
R+ TP F ++ L +R A + KL G +P++FTYN
Sbjct: 53 RLTNQIPTPPISQFGRILASLALSNRYSIALSFHQKLHFKGIKPDLFTYNVLINCFSQLG 112
Query: 127 -----------TLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDK 163
TLINGL + G T AL L +E+ ++ V + VD
Sbjct: 113 HTHFLDRVSYETLINGLCKVGETRAALRLLKEVNEKIVQYDVVMYTAIINGLCKDKLVDD 172
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
A +L+ +M + ++PDV TY ++I GFC +A L +M + V+ + TFN ++
Sbjct: 173 AFDLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFNDMKLENVEADEYTFNTLVS 232
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
CK G + E ++ +M++ GV+P+ YN+LMDG+CL V++AK +F +M G T
Sbjct: 233 AFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYCLVKEVDKAKNIFNTMVQRGVTA 292
Query: 284 TV------------------FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
V +YS LI+G+CK+ I AL L EM +G P+++ YN+
Sbjct: 293 NVRTMNLFQEMHCKEIIPDTIAYSSLIDGFCKSGRIPQALELVDEMHDRGQPPNIITYNS 352
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+ L +IH VE+ L +++ G+ D +TY +GL K+ + EA E+F L
Sbjct: 353 ILYALCKIHHVEKTIALLRKIKVKGIQPDAYTYTILTNGLFKDGRLEEAREIFPDL 408
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 182/382 (47%), Gaps = 63/382 (16%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF- 62
F+ + N P+PP + F + LA + Y LS ++L+ G+ PDL+TYN+LINCF
Sbjct: 51 FNRLTNQIPTPP-ISQFGRILASLALSNRYSIALSFHQKLHFKGIKPDLFTYNVLINCFS 109
Query: 63 --------------------CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 102
CK+G +L + + V +T++I GLC +
Sbjct: 110 QLGHTHFLDRVSYETLINGLCKVGETRAALRLLKEVNEKIVQYDVVMYTAIINGLCKDKL 169
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVD 162
+ +A L+T++ P+VFTYN +I G F V G +
Sbjct: 170 VDDAFDLYTEMVAKRVSPDVFTYNAMIYG-----------------------FCVVGRLK 206
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
A LF MK EN+ D T+ +++ FC + E K ++ MM +GV+P+++T+N +M
Sbjct: 207 DAIGLFNDMKLENVEADEYTFNTLVSAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLM 266
Query: 223 DELCKNGKMDEASRLLDLMIQIGVR------------------PNAFVYNTLMDGFCLTG 264
D C ++D+A + + M+Q GV P+ Y++L+DGFC +G
Sbjct: 267 DGYCLVKEVDKAKNIFNTMVQRGVTANVRTMNLFQEMHCKEIIPDTIAYSSLIDGFCKSG 326
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
R+ +A EL M G + +Y+ ++ CK +E ++L ++ KGI+PD Y
Sbjct: 327 RIPQALELVDEMHDRGQPPNIITYNSILYALCKIHHVEKTIALLRKIKVKGIQPDAYTYT 386
Query: 325 TLFVVLFEIHQVERAFKLFDEM 346
L LF+ ++E A ++F ++
Sbjct: 387 ILTNGLFKDGRLEEAREIFPDL 408
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 185/385 (48%), Gaps = 26/385 (6%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP FN+L K + +F + GL P + ++N LI+ CK G V GF
Sbjct: 139 PPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFR 198
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ G + P+ TF++LI GLC E R+ E + LF ++ G PN T+ LI+G
Sbjct: 199 LKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQC 258
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ G +AL F+ M + + + PD+VTY ++I G C
Sbjct: 259 KGGKVDLALKNFQMMLA-----------------------QGVRPDLVTYNALINGLCKV 295
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
D EA+ L+ EM G++P+ +TF ++D CK G M+ A + M++ G+ + +
Sbjct: 296 GDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAF 355
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
L+ G C GRV+ A+ + M S G +Y+++++ +CK + L EM S
Sbjct: 356 TVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQS 415
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
G P VV YN L L + QV+ A L D M GVA + TY ++G K+ V+
Sbjct: 416 DGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVD 475
Query: 374 AVELFRTLRILKCELDIRAYNCLID 398
V++F + + L D +Y L++
Sbjct: 476 -VDIFNSEKGLV--KDYASYTALVN 497
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 152/323 (47%), Gaps = 23/323 (7%)
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
+L S + PN F L+ G C + A +F ++ G P V ++NTLI+G + G
Sbjct: 133 VLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGA 192
Query: 138 TIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
EGF K M+ E + PDV T++++I G C +
Sbjct: 193 V------------------EEGFRLKG-----VMESERVCPDVFTFSALINGLCKEGRLD 229
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
E L EM +G+ PN VTF V++D CK GK+D A + +M+ GVRP+ YN L+
Sbjct: 230 EGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALI 289
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
+G C G + A+ L M + G +++ LI+G CK ++E AL + M+ +GI+
Sbjct: 290 NGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIE 349
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
D V + L L +V A ++ +M G D TY +D CK + +L
Sbjct: 350 LDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKL 409
Query: 378 FRTLRILKCELDIRAYNCLIDGL 400
+ ++ + YN L++GL
Sbjct: 410 LKEMQSDGHVPGVVTYNALMNGL 432
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 131/240 (54%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
++++ +L++ D P+ + ++ GFC A+ + E+ +G++P VV+FN
Sbjct: 123 LERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNT 182
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
++ CK G ++E RL +M V P+ F ++ L++G C GR++ LF M G
Sbjct: 183 LISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKG 242
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
++++LI+G CK +++ AL + ML++G++PD+V YN L L ++ ++ A
Sbjct: 243 LVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 302
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+L +EM G+ D T+ T IDG CK + A+E+ R + ELD A+ LI GL
Sbjct: 303 RLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGL 362
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%)
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
E+E + + Y E+L G P+ +N L ++ V A +FDE+ + G+ ++
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
T I G CK + E L + + D+ ++ LI+GL
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGL 222
>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 190/395 (48%), Gaps = 12/395 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++NIL L + + +L++++ S G+ P L +YN LI CK G + + +L
Sbjct: 429 VVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLK 488
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
IL PNAVT+T LI G + A +F ++ P T+NT+INGL +TG
Sbjct: 489 SILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTG 548
Query: 137 ---HTIVALNLFEEMA---------SGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
T LN F + S F EG VD A + +M + I+PDV+TYT
Sbjct: 549 RVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYT 608
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
S+I G C +N A + +M +G++ +VV ++ ++D CK M+ AS+ ++ I
Sbjct: 609 SLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDI 668
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G+ PN VYN+++ GF + A L M + Y+ +I G K ++ A
Sbjct: 669 GLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLA 728
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L LY EMLSK I PD+V+Y L L Q+E A K+ EM + + Y I G
Sbjct: 729 LDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAG 788
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + EA L + D Y+ L++G
Sbjct: 789 NFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 823
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 188/396 (47%), Gaps = 11/396 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ + K ++ L L + S GL ++ L+ +C +G V+ +
Sbjct: 288 PSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQL 347
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ P+ V F+ LI G + +A L+T++++ G +PNVF N+L+ G +
Sbjct: 348 FDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHE 407
Query: 135 TGHTIVALNLFEEMASGN-----------GEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
A LF+E G G V++A L+ +M + I P +V+Y
Sbjct: 408 QNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSY 467
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
++I G C ++A +L ++++G++PN VT+ +++D K G + A + + M+
Sbjct: 468 NNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMA 527
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
+ P +NT+++G TGRV+ ++ + G T +Y+ +I+G+ K ++
Sbjct: 528 ANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDS 587
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
AL Y EM GI PDV+ Y +L L + +++ A ++ +M+ G+ D Y ID
Sbjct: 588 ALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALID 647
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G CK + A + F L + + YN +I G
Sbjct: 648 GFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISG 683
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 169/350 (48%), Gaps = 23/350 (6%)
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 110
++ TYNIL+ ++G+V+ + +++ TP+ V++ +LI G C + + +A ++
Sbjct: 428 NVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSML 487
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQ 170
+ G +PN TY LI+G ++ G + A +FE+M + N
Sbjct: 488 KSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAAN------------------ 529
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
I P T+ +VI G +E + L + QG +T+N I+D K G
Sbjct: 530 -----IAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGA 584
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+D A M + G+ P+ Y +L+DG C + ++ A E+ M+ G V +YS
Sbjct: 585 VDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSA 644
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI+G+CK ++E A + E+L G+ P+ V+YN++ ++ +E A L EM ++
Sbjct: 645 LIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNK 704
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
V D Y + I GL K + A++L+ + DI Y LI+GL
Sbjct: 705 VPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGL 754
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 182/376 (48%), Gaps = 13/376 (3%)
Query: 37 LSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 96
L LF + G+ PD+ +++LIN K+G + + + R+ PN SL++G
Sbjct: 345 LQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEG 404
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS------ 150
++ + A LF + G NV TYN L+ L G A NL+E+M S
Sbjct: 405 FHEQNLLEHAYGLFDEAVEHGI-TNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPS 463
Query: 151 ----GNGEFG--VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
N G +G +DKA + + + + P+ VTYT +I GF D A +
Sbjct: 464 LVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFE 523
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
+MM + P TFN +++ L K G++ E L+ I+ G + YN+++DGF G
Sbjct: 524 QMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEG 583
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
V+ A + M G + V +Y+ LI+G CK+ +I AL ++ +M KG+K DVV Y+
Sbjct: 584 AVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYS 643
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
L ++H +E A K F E+ G+ +T Y + I G + + A+ L + +
Sbjct: 644 ALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKN 703
Query: 385 KCELDIRAYNCLIDGL 400
K D++ Y +I GL
Sbjct: 704 KVPCDLQVYTSIIGGL 719
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 197/426 (46%), Gaps = 51/426 (11%)
Query: 22 ILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRS 81
++ C+ + K ++ V FK GL D Y+IL+ C+ ++ +L +
Sbjct: 226 VMRACMKEGK-FEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREF 284
Query: 82 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVA 141
+ P+ T+T++I + +EA L ++ G NV +L+ G G +A
Sbjct: 285 GWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLA 344
Query: 142 LNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
L LF+E+ G NG V G ++KA EL+ +MK I P+V S++
Sbjct: 345 LQLFDEVVEGGVVPDVVIFSVLINGCSKV-GDMEKAYELYTRMKLMGIQPNVFIVNSLLE 403
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
GF N A L E ++ G+ NVVT+N+++ L + GK++EA L + M+ G+ P
Sbjct: 404 GFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMVSKGITP 462
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
+ YN L+ G C G +++A + S+ G +Y++LI+G+ K + E A ++
Sbjct: 463 SLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVF 522
Query: 309 GEMLSKGIKP-----------------------------------DVVIYNTLFVVLFEI 333
+M++ I P + YN++ F+
Sbjct: 523 EQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKE 582
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
V+ A + EM G++ D TY + IDGLCK++ I A+E+ ++ +LD+ AY
Sbjct: 583 GAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAY 642
Query: 394 NCLIDG 399
+ LIDG
Sbjct: 643 SALIDG 648
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 176/397 (44%), Gaps = 13/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V N L + + L+ + G++ D YT ++++ K G+
Sbjct: 183 PWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKF 242
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+A ++ L++ +C + A L ++R FG P+ TY +I +
Sbjct: 243 FKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVK 302
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G+ + AL L +EM S + V G V+ A +LF ++ + + PDVV
Sbjct: 303 QGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVI 362
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
++ +I G D +A L M G+QPNV N +++ + ++ A L D +
Sbjct: 363 FSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAV 422
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ N YN L+ G+VN A L+ M S G T ++ SY+ LI G+CK ++
Sbjct: 423 EHGI-TNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMD 481
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A S+ +L +G+KP+ V Y L F+ ERAF +F++M +A T+ T I
Sbjct: 482 KAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVI 541
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+GL K + E + YN +IDG
Sbjct: 542 NGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDG 578
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 150/333 (45%), Gaps = 15/333 (4%)
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
R F ++ F L+K ++I +A F + P V N L+ + R
Sbjct: 143 RYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVC 202
Query: 140 VALNLFEEMASGNGEFG-------------VEGFVDKAKELFLQMKDENINPDVVTYTSV 186
A L++EM G +G EG ++ ++ F + K + D Y+ +
Sbjct: 203 DARQLYDEMVE-RGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSIL 261
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
++ C D N A LL EM + G P+ T+ ++ K G EA RL D M+ +G+
Sbjct: 262 VQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGL 321
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
N V +LM G+C+ G VN A +LF + G V +S+LING K ++E A
Sbjct: 322 PMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYE 381
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
LY M GI+P+V I N+L E + +E A+ LFDE G+ + TY + L
Sbjct: 382 LYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGI-TNVVTYNILLKWLG 440
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + EA L+ + + +YN LI G
Sbjct: 441 ELGKVNEACNLWEKMVSKGITPSLVSYNNLILG 473
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+ + G L K L L+ + S + PD+ Y +LIN G++ + +L +
Sbjct: 712 YTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMD 771
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+ TP+ + + LI G E + EA L ++ G P+ TY+ L+NG + HT+
Sbjct: 772 GNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLKVSHTL 831
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
VF+Y L+ + + +I A+ + ML + P V I N L + + V A +L+D
Sbjct: 152 VFNY--LLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYD 209
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
EM G+ D +T + K E + F+ + E+D AY+ L+ +
Sbjct: 210 EMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAV 265
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 77/200 (38%)
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
+CLL G + + FN ++ + K+ +A M++ + P + N L+
Sbjct: 135 ECLLECSGRYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTA 194
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
V A++L+ M G ++ +++ K + E + E +G++ D
Sbjct: 195 MVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVD 254
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
Y+ L + + A +L EM+ G TY I K VEA+ L
Sbjct: 255 AAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKD 314
Query: 380 TLRILKCELDIRAYNCLIDG 399
+ + +++ L+ G
Sbjct: 315 EMVSVGLPMNVIVTRSLMKG 334
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 169/349 (48%), Gaps = 23/349 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++ IL L+ + V +LF + + + D+Y Y +IN +C+ G + VL
Sbjct: 247 VGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLD 306
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ + PN T+ LI G C ++ A L ++ G N +NT+I+G R
Sbjct: 307 ECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCR-- 364
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+G VD A ++ M+ + D+ TY ++ G C N
Sbjct: 365 ---------------------KGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRL 403
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+EAK LL M++ GV PN VT+ ++ CK+G M EA RL M + G P+ YN +
Sbjct: 404 DEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVM 463
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG+ G + A+ ME G V++Y+ L++G+C N +++ AL L+ EM +G
Sbjct: 464 IDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGT 523
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
+P+VV Y L L + + E AF+L+D+M + G+ D Y + L
Sbjct: 524 EPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSL 572
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 175/385 (45%), Gaps = 29/385 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM---GRVSHGFVVL 75
+ +++ L K+ D L + G+ + YN L++C+ + GRV +L
Sbjct: 179 AASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQE---IL 235
Query: 76 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRT 135
+ T+T L+ L I + ALF +++ +V+ Y +IN R
Sbjct: 236 EIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRA 295
Query: 136 GHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
G+ A + +E GNG + P+ TY +I GFC
Sbjct: 296 GNMRRAAKVLDECV-GNG----------------------VEPNERTYGVLINGFCKIGQ 332
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
A+ LL +M QGV N + FN ++D C+ G +D+A ++ M ++GV + + YNT
Sbjct: 333 MEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNT 392
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L G C R++ AK L M MG +Y+ LI+ +CK+ ++ A L+ EM KG
Sbjct: 393 LACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKG 452
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
P VV YN + + + A + EM++ G D +TY + + G C N + A+
Sbjct: 453 ATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVAL 512
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
+LF ++ E ++ AY LI GL
Sbjct: 513 KLFEEMKQRGTEPNVVAYTALISGL 537
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 12/225 (5%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FN + + D L + + G+ D+YTYN L C++ R+ +L ++
Sbjct: 355 FNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMI 414
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
PN VT+T+LI C + ++EA LF ++ G P+V TYN +I+G + G
Sbjct: 415 EMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIR 474
Query: 140 VALNLFEEM------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
A +EM AS V G VD A +LF +MK P+VV YT++I
Sbjct: 475 EAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALI 534
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 232
G A L +M+ G+ P+ ++ ++ L + + D
Sbjct: 535 SGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNRKD 579
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ L K+ LF+ + G P + TYN++I+ + K G +
Sbjct: 420 PNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERF 479
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + F P+ T+ SL+ G C ++ A LF +++ G EPNV Y LI+GL +
Sbjct: 480 RKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAK 539
Query: 135 TGHTIVALNLFEEM 148
G + A L+++M
Sbjct: 540 EGRSEAAFQLYDDM 553
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N++ K K + G PD+YTY L++ C G+V +
Sbjct: 455 PSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKL 514
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ + PN V +T+LI GL E R A L+ + G P+ Y+ L+ L+
Sbjct: 515 FEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLH 573
>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
Length = 536
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 163/335 (48%), Gaps = 24/335 (7%)
Query: 56 NILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV 115
N L+N K+ RV + LR + TF LI+GLC + +A L +
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 116 FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDEN 175
FGCEP++ TYNTLI G ++ ++KA E+F +K +
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNE-----------------------LNKASEMFKDVKSGS 271
Query: 176 I-NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
+ +PDVVTYTS+I G+C A EA LL +M+ G+ P VTFNV++D K G+M A
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA 331
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+ MI G P+ + +L+DG+C G+V++ L+ M + G F+YSILIN
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA 391
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
C + A L G++ SK I P +YN + + +V A + +EM++ D
Sbjct: 392 LCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD 451
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
T+ I G C + EAV +F + + C D
Sbjct: 452 KITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 486
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 189/398 (47%), Gaps = 35/398 (8%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
+ LN+R S ++N+L L K +D +F+ + S G+ P+ L++ F +
Sbjct: 95 FKLNIRHS---FWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEK 151
Query: 66 GRVSHGFVVLGRILR---SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
G++ +L + C N SL+ L R+ +A LF + F +
Sbjct: 152 GKLHFATALLLQSFEVEGCCMVVN-----SLLNTLVKLDRVEDAMKLFDEHLRFQSCNDT 206
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
T+N LI GL G AL L M+ FG E PD+VT
Sbjct: 207 KTFNILIRGLCGVGKAEKALELLGVMSG----FGCE-------------------PDIVT 243
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y ++I+GFC +N+ N+A + ++ V P+VVT+ ++ CK GKM EAS LLD M
Sbjct: 244 YNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDM 303
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+++G+ P +N L+DG+ G + A+E+ M S GC V +++ LI+GYC+ ++
Sbjct: 304 LRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQV 363
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
L+ EM ++G+ P+ Y+ L L +++ +A +L ++ + + Y
Sbjct: 364 SQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPV 423
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
IDG CK + EA + + KC+ D + LI G
Sbjct: 424 IDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIG 461
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 164/333 (49%), Gaps = 25/333 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+FNIL L + L L ++ G PD+ TYN LI FCK ++ + +
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 79 LR-SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
S +P+ VT+TS+I G C ++ EA++L + G P T+N L++G + G
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 138 TIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
+ A + +M S FG PDVVT+TS+I G+C +
Sbjct: 328 MLTAEEIRGKMIS----FGC-------------------FPDVVTFTSLIDGYCRVGQVS 364
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
+ L EM +G+ PN T++++++ LC ++ +A LL + + P F+YN ++
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVI 424
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
DGFC G+VN A + ME C +++ILI G+C + A+S++ +M++ G
Sbjct: 425 DGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCS 484
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
PD + ++L L + + A+ L +++ R G
Sbjct: 485 PDKITVSSLLSCLLKAGMAKEAYHL-NQIARKG 516
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+N R P +++IL L L +L S + P + YN +I+ FCK G+
Sbjct: 373 MNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGK 432
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V+ V++ + + P+ +TFT LI G C + R+ EA ++F K+ GC P+ T ++
Sbjct: 433 VNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSS 492
Query: 128 LINGLYRTGHTIVALNL 144
L++ L + G A +L
Sbjct: 493 LLSCLLKAGMAKEAYHL 509
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 185/386 (47%), Gaps = 28/386 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +F L + +D L + ++ S+ DL + LIN K R+ +
Sbjct: 390 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 449
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L I + PN +T+TS+I G C ++ A + + GC+PN +TYN+L+ GL +
Sbjct: 450 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 509
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ + KA L +M+ + I P+V+TYT++++G C +
Sbjct: 510 -----------------------DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEH 546
Query: 195 DWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
D++ A L EMM+Q G++P+ + V+ D LCK G+ +EA +++ GV Y
Sbjct: 547 DFDNA-FRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYY 602
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
TL+DGF G + A L M GCT ++YS+L++ CK K + AL + +M
Sbjct: 603 TTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSL 662
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+GIK + Y L + + + A ++++EM G TY FI+ CK + +
Sbjct: 663 RGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLED 722
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
A +L + D+ YN LIDG
Sbjct: 723 AEDLILKMEREGVAPDVVTYNILIDG 748
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 170/334 (50%), Gaps = 13/334 (3%)
Query: 53 YTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 112
Y+Y ILI C V V+ + R +PN FT LI GLC R+ +A LF
Sbjct: 254 YSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDA 313
Query: 113 LRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG--------EFGVEGFVDK- 163
+ G P+V TYN +I G + G AL + +E+ NG + G D+
Sbjct: 314 MPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI-KELMEKNGCHPDDWTYNTLIYGLCDQK 372
Query: 164 ---AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
A+EL E P VVT+T++I G+C A +++A + +MM + ++ F
Sbjct: 373 TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGK 432
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ L K ++ EA LL+ + G+ PN Y +++DG+C +G+V+ A E+ ME G
Sbjct: 433 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 492
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
C ++Y+ L+ G K+K++ A++L +M GI P+V+ Y TL + H + AF
Sbjct: 493 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 552
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
+LF+ M+++G+ D Y D LCK EA
Sbjct: 553 RLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA 586
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 193/392 (49%), Gaps = 25/392 (6%)
Query: 9 NMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV 68
+ R + P C +N LA+ + + ++ +L GL PD TYN +I +CK G +
Sbjct: 141 SARLALSPKC-YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDL 199
Query: 69 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTL 128
+ +L P T +L+ G C + +A LF + + GC+ N ++Y L
Sbjct: 200 TTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTIL 259
Query: 129 INGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
I GL V KA LFL MK + +P+V +T +I
Sbjct: 260 IQGLCDA-----------------------KCVRKALVLFLMMKRDGCSPNVRAFTFLIS 296
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
G C + +A+ L M GV P+V+T+N ++ K G+M++A ++ +LM + G P
Sbjct: 297 GLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHP 356
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
+ + YNTL+ G C + A+EL + G T TV +++ LINGYC ++ + AL +
Sbjct: 357 DDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMK 415
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
+M+S K D+ ++ L L + +++ A +L +E+ +G+ + TY + IDG CK+
Sbjct: 416 NKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKS 475
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ A+E+ + + C+ + YN L+ GL
Sbjct: 476 GKVDIALEVLKMMERDGCQPNAWTYNSLMYGL 507
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 174/360 (48%), Gaps = 11/360 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F L L K L +++ GL P++ TY +I+ +CK G+V VL +
Sbjct: 430 FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMME 489
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
R PNA T+ SL+ GL + ++ +A AL TK++ G PNV TY TL+ G
Sbjct: 490 RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFD 549
Query: 140 VALNLFEEMASGNG----EFGVEGFVD------KAKELFLQMKDENINPDVVTYTSVIRG 189
A LFE M NG E D +A+E + + + + V YT++I G
Sbjct: 550 NAFRLFE-MMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDG 608
Query: 190 FCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
F A + + A L+ M+D+G P+ T++V++ LCK +++EA +LD M G++
Sbjct: 609 FSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 668
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
F Y L+D G+ + AK ++ M S G + +Y++ IN YCK +E A L
Sbjct: 669 IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLIL 728
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
+M +G+ PDVV YN L + ++RAF M + WTY + L K +
Sbjct: 729 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGN 788
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 185/402 (46%), Gaps = 21/402 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG-FV 73
P ++N + K T F+ L GL P+ +T N L+ +C+ G + ++
Sbjct: 181 PDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWL 240
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
L L C N ++T LI+GLC + +A LF ++ GC PNV + LI+GL
Sbjct: 241 FLMMPLMGC-QRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLC 299
Query: 134 RTGHTIVALNLFEEMAS---------------GNGEFGVEGFVDKAKELFLQMKDENINP 178
++G A LF+ M G + G K KEL M+ +P
Sbjct: 300 KSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKEL---MEKNGCHP 356
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D TY ++I G C EA+ LL + +G P VVTF +++ C K D+A R+
Sbjct: 357 DDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMK 415
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
+ M+ + + V+ L++ R+ AKEL + + G V +Y+ +I+GYCK+
Sbjct: 416 NKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKS 475
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+++ AL + M G +P+ YN+L L + ++ +A L +MQ+DG+ + TY
Sbjct: 476 GKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITY 535
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
T + G C A LF + + D AY L D L
Sbjct: 536 TTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDAL 577
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 169/415 (40%), Gaps = 33/415 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L +D LF+ + GL PD + Y +L + CK GR +
Sbjct: 530 PNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF 589
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
I+R V +T+LI G AA L ++ GC P+ +TY+ L++ L +
Sbjct: 590 ---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCK 646
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
AL + ++M+ E EG D AK ++ +M P T
Sbjct: 647 QKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATT 706
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT I +C +A+ L+++M +GV P+VVT+N+++D G +D A L M+
Sbjct: 707 YTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV 766
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAK-----------------ELFVSMESMGCTHTV 285
PN + Y L+ L G + + +L M G TV
Sbjct: 767 GASCEPNYWTYCLLLKHL-LKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTV 825
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
+YS LI G+CK +E A L M KG+ P+ IY L + E+A
Sbjct: 826 TTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSI 885
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
M G +YR + GLC + LF L L D A+ L DGL
Sbjct: 886 MSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGL 940
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 133/311 (42%), Gaps = 28/311 (9%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++++L L K K + L + +++ G+ ++ Y ILI+ + G+ H +
Sbjct: 632 PDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRM 691
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ S P+A T+T I C E R+ +A L K+ G P+V TYN LI+G
Sbjct: 692 YNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGH 751
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF----------------------------VDKAKE 166
G+ A + + M + E + +D +
Sbjct: 752 MGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQ 811
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
L +M +NP V TY+S+I GFC A EA LL M +G+ PN + +++ C
Sbjct: 812 LLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCC 871
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
++A + +M + G +P Y L+ G C G + K LF + +G H
Sbjct: 872 DTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEV 931
Query: 287 SYSILINGYCK 297
++ IL +G K
Sbjct: 932 AWKILNDGLLK 942
>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 712
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 191/392 (48%), Gaps = 35/392 (8%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FN L + ++LF+ + G+ P + T+N L++ K GR + +
Sbjct: 144 FNSLIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMR 203
Query: 80 RS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
R+ TP++ TF +LI G C S + +A +F ++ ++ C P+V TYNT+I+GL R G
Sbjct: 204 RTYGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKV 263
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+A NL + G + KA ++P++V+YT+++RG+C + +E
Sbjct: 264 KIAHNL------------LNGMLKKATA---------VHPNIVSYTTLLRGYCMKQEIDE 302
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL---DLMIQIGVRPNAFVYNT 255
A + EM+ +G++PN VT+N ++ L + + DE L D P+A +N
Sbjct: 303 ALLVFHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTTFS--PDACTFNI 360
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L+ C G ++ A ++F M +M SYS+LI C E + A +L+ E+ K
Sbjct: 361 LIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKE 420
Query: 316 I-------KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
+ KP YN +F L + ++A K+F ++ + G A D +YRT I GLC+
Sbjct: 421 VLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRG-AQDPSSYRTLITGLCRE 479
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
A EL + + D Y LIDGL
Sbjct: 480 GKFKAAYELLVLMLRREFVPDPETYEVLIDGL 511
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 170/361 (47%), Gaps = 30/361 (8%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M P +FN L KN D ++FK + PD+ TYN +I+
Sbjct: 198 MFDEMRRTYGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGL 257
Query: 63 CKMGRVSHGFVVLGRILR--SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C+ G+V +L +L+ + PN V++T+L++G C + I EA +F ++ G +P
Sbjct: 258 CRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKP 317
Query: 121 NVFTYNTLINGLYRTGHT------IVALNLFEEMASGNGEFGV-------EGFVDKAKEL 167
N TYNTLI GL ++ + F + F + G +D A ++
Sbjct: 318 NAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTTFSPDACTFNILIKAHCDAGHLDAAMKV 377
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV-------QPNVVTFNV 220
F +M + ++PD +Y+ +IR C N++++A+ L E+ ++ V +P +N+
Sbjct: 378 FQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLGKNECKPLAAAYNL 437
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVR-PNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
+ + LC NGK +A ++ +++ G + P++ Y TL+ G C G+ A EL V M
Sbjct: 438 MFEYLCANGKAKQAEKVFRQLMKRGAQDPSS--YRTLITGLCREGKFKAAYELLVLMLRR 495
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
+Y +LI+G K E A ML P + T VL E+ V+R
Sbjct: 496 EFVPDPETYEVLIDGLLKIGEALLAHDTLQRMLRSSYLP---VATTFHSVLAEL--VKRK 550
Query: 340 F 340
F
Sbjct: 551 F 551
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 147/363 (40%), Gaps = 23/363 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNS-TGLFPDLYTYNILINC 61
+F ML R P ++N L L++ YD + ++ T PD T+NILI
Sbjct: 306 VFHEMLT-RGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTTFSPDACTFNILIKA 364
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL----RVFG 117
C G + V +L P++ +++ LI+ LC + +A LF +L + G
Sbjct: 365 HCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLG 424
Query: 118 ---CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE-----------FGVEGFVDK 163
C+P YN + L G A +F ++ + EG
Sbjct: 425 KNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRGAQDPSSYRTLITGLCREGKFKA 484
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
A EL + M PD TY +I G + A L M+ P TF+ ++
Sbjct: 485 AYELLVLMLRREFVPDPETYEVLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLA 544
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
EL K +++ LL +M++ +R N + + + + +A F+ + +
Sbjct: 545 ELVKRKFANDSFGLLTVMLEKRIRQNIDLSTQAVRLVFSSAQKEKA---FLIVRLLYDNG 601
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
+ L++ C+N+++ A +L L K D+ NT+ L + + AF L+
Sbjct: 602 YLIKMEELLDFLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTIIEGLCKHKRHSEAFSLY 661
Query: 344 DEM 346
+E+
Sbjct: 662 NEL 664
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 129/312 (41%), Gaps = 26/312 (8%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLF-------PDLYTY 55
+F MLNM+ P S+++L L +D +LF L + P Y
Sbjct: 377 VFQEMLNMKLHPDS-ASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLGKNECKPLAAAY 435
Query: 56 NILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV 115
N++ C G+ V ++++ + ++ +LI GLC E + A L +
Sbjct: 436 NLMFEYLCANGKAKQAEKVFRQLMKRG-AQDPSSYRTLITGLCREGKFKAAYELLVLMLR 494
Query: 116 FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDK 163
P+ TY LI+GL + G ++A + + M + E F +
Sbjct: 495 REFVPDPETYEVLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELVKRKFAND 554
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM-DQGVQPNVVTFNVIM 222
+ L M ++ I ++ T +R +++ E L++ ++ D G ++ ++
Sbjct: 555 SFGLLTVMLEKRIRQNIDLSTQAVR-LVFSSAQKEKAFLIVRLLYDNGY---LIKMEELL 610
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
D LC+N K+ +A L+ ++ + NT+++G C R + A L+ + +G
Sbjct: 611 DFLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTIIEGLCKHKRHSEAFSLYNELVELGNH 670
Query: 283 HTVFSYSILING 294
+ + +L N
Sbjct: 671 QQLSCHVVLTNA 682
>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
Length = 649
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 189/399 (47%), Gaps = 24/399 (6%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP +F +N D + L ++ G PD+ Y+ LIN F + G V
Sbjct: 222 PPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALD 281
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L +L PN V + + +KGLC R + L ++ GC PN T++ LI+ L
Sbjct: 282 LLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLC 338
Query: 134 RTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVV 181
+ A+ + E+M E G VD A L M PD +
Sbjct: 339 QNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDAL 395
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+ +V++GFC A W++A L+ +M +TFN+++D LC+NG ++ A+++ + M
Sbjct: 396 GFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQM 455
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ P+ Y++L++GF G V A +LF SM C +FSY+ ++ G C+
Sbjct: 456 PRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLF---RSMPCKPDIFSYNAVLKGLCRAARW 512
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A L EM+ K P+ V +N L L + V+RA ++ ++M G D +TY
Sbjct: 513 EDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNAL 572
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I+G + + +A++L T + C+ D +YN + GL
Sbjct: 573 INGFSEQGRLDDALKLLST---MSCKPDAISYNSTLKGL 608
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 161/321 (50%), Gaps = 21/321 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F++L L +N D+ + + +++ G PD YNI+IN + GRV +
Sbjct: 325 PNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRL 384
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+A+ F +++KG C R +A+ L ++ C T+N LI+ L +
Sbjct: 385 LNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQ 441
Query: 135 TGHTIVALNLFEEM------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G A +FE+M +S F +G V+ A +LF M PD+ +
Sbjct: 442 NGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFS 498
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +V++G C A W +A L+ EM+ + PN VTFN++++ LC+ G +D A +L+ M
Sbjct: 499 YNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMP 558
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G P+ F YN L++GF GR++ A +L + +M C SY+ + G C+ + +
Sbjct: 559 NYGSTPDIFTYNALINGFSEQGRLDDALKL---LSTMSCKPDAISYNSTLKGLCRAERWQ 615
Query: 303 GALSLYGEMLSKGIKPDVVIY 323
A L EML P+ V +
Sbjct: 616 DAEELVAEMLRNKCTPNEVTF 636
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 167/358 (46%), Gaps = 22/358 (6%)
Query: 54 TYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL 113
++N L+ +C+ GR++ VLG R+ N VT+T+LI G C R+ +A L +
Sbjct: 126 SHNTLVAGYCRDGRLADAERVLG-AARATGAANVVTYTALIDGYCRSGRLDDALRLIASM 184
Query: 114 RVFGCEPNVFTYNTLINGL-----YRTGHTIVALNLFEEMASGNGEFGVE-------GFV 161
V P+ +TYNT++ GL + ++A + F + G +
Sbjct: 185 PV---APDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLL 241
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
D+A +L QM PDVV Y+++I GF ++A LL M+ +PN V +N
Sbjct: 242 DRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAA 298
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
+ LC + ++ L+ M++ G PN ++ L+ C V+ A E+ ME GC
Sbjct: 299 LKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGC 358
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
+Y+I+IN + ++ AL L M+ KPD + +N + + A +
Sbjct: 359 EPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASE 415
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
L +M RD T+ ID LC+N + A ++F + +C DI Y+ L++G
Sbjct: 416 LIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNG 473
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 161/344 (46%), Gaps = 34/344 (9%)
Query: 56 NILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV 115
NILI C R++ VL + + +AV+ +L+ G C + R+ +A + R
Sbjct: 94 NILIKKLCATRRLADAERVLDALKAAAAA-DAVSHNTLVAGYCRDGRLADAERVLGAARA 152
Query: 116 FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDEN 175
G NV TY LI+G R+G AL L M
Sbjct: 153 TGAA-NVVTYTALIDGYCRSGRLDDALRLIASMP-------------------------- 185
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+ PD TY +V++G C A W EA+ L+ EM+ PN VTF + C+NG +D A
Sbjct: 186 VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAV 245
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+LLD M + G P+ +Y+TL++GF G V++A +L + +M C Y+ + G
Sbjct: 246 QLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL---LNTMLCKPNTVCYNAALKGL 302
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
C + E L EM+ KG P+ ++ L L + + V+ A ++ ++M++ G DT
Sbjct: 303 CIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDT 362
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
Y I+ L + + +A+ L + + C+ D +N ++ G
Sbjct: 363 VNYNIIINSLSERGRVDDALRLLNS---MVCKPDALGFNAVLKG 403
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P P + S+N + L + ++ L + P+ T+NILIN C+ G V
Sbjct: 491 PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRA 550
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
VL ++ TP+ T+ +LI G + R+ +A L + + C+P+ +YN+ + G
Sbjct: 551 IEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKG 607
Query: 132 LYRTGHTIVALNLFEEM 148
L R A L EM
Sbjct: 608 LCRAERWQDAEELVAEM 624
>gi|15225031|ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42570711|ref|NP_973429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g06000
gi|4006835|gb|AAC95177.1| hypothetical protein [Arabidopsis thaliana]
gi|110736272|dbj|BAF00106.1| hypothetical protein [Arabidopsis thaliana]
gi|330250896|gb|AEC05990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330250897|gb|AEC05991.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 536
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 163/335 (48%), Gaps = 24/335 (7%)
Query: 56 NILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV 115
N L+N K+ RV + LR + TF LI+GLC + +A L +
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 116 FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDEN 175
FGCEP++ TYNTLI G ++ ++KA E+F +K +
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNE-----------------------LNKASEMFKDVKSGS 271
Query: 176 I-NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
+ +PDVVTYTS+I G+C A EA LL +M+ G+ P VTFNV++D K G+M A
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA 331
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+ MI G P+ + +L+DG+C G+V++ L+ M + G F+YSILIN
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA 391
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
C + A L G++ SK I P +YN + + +V A + +EM++ D
Sbjct: 392 LCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD 451
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
T+ I G C + EAV +F + + C D
Sbjct: 452 KITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 486
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 189/398 (47%), Gaps = 35/398 (8%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
+ LN+R S ++N+L L K +D +F+ + S G+ P+ L++ F +
Sbjct: 95 FKLNIRHS---FWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEK 151
Query: 66 GRVSHGFVVLGRILR---SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
G++ +L + C N SL+ L R+ +A LF + F +
Sbjct: 152 GKLHFATALLLQSFEVEGCCMVVN-----SLLNTLVKLDRVEDAMKLFDEHLRFQSCNDT 206
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
T+N LI GL G AL L M+ FG E PD+VT
Sbjct: 207 KTFNILIRGLCGVGKAEKALELLGVMSG----FGCE-------------------PDIVT 243
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGV-QPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y ++I+GFC +N+ N+A + ++ V P+VVT+ ++ CK GKM EAS LLD M
Sbjct: 244 YNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDM 303
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+++G+ P +N L+DG+ G + A+E+ M S GC V +++ LI+GYC+ ++
Sbjct: 304 LRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQV 363
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
L+ EM ++G+ P+ Y+ L L +++ +A +L ++ + + Y
Sbjct: 364 SQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPV 423
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
IDG CK + EA + + KC+ D + LI G
Sbjct: 424 IDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIG 461
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 164/333 (49%), Gaps = 25/333 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+FNIL L + L L ++ G PD+ TYN LI FCK ++ + +
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 79 LR-SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
S +P+ VT+TS+I G C ++ EA++L + G P T+N L++G + G
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 138 TIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
+ A + +M S FG PDVVT+TS+I G+C +
Sbjct: 328 MLTAEEIRGKMIS----FGC-------------------FPDVVTFTSLIDGYCRVGQVS 364
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
+ L EM +G+ PN T++++++ LC ++ +A LL + + P F+YN ++
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVI 424
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
DGFC G+VN A + ME C +++ILI G+C + A+S++ +M++ G
Sbjct: 425 DGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCS 484
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
PD + ++L L + + A+ L +++ R G
Sbjct: 485 PDKITVSSLLSCLLKAGMAKEAYHL-NQIARKG 516
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+N R P +++IL L L +L S + P + YN +I+ FCK G+
Sbjct: 373 MNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGK 432
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V+ V++ + + P+ +TFT LI G C + R+ EA ++F K+ GC P+ T ++
Sbjct: 433 VNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSS 492
Query: 128 LINGLYRTGHTIVALNL 144
L++ L + G A +L
Sbjct: 493 LLSCLLKAGMAKEAYHL 509
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 135/469 (28%), Positives = 202/469 (43%), Gaps = 85/469 (18%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNS-------------------------- 45
P PP C N L LA+++ + + SL R+ +
Sbjct: 37 PLPPLRC-LNTLLMALARHRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHL 95
Query: 46 -----TGLFPDLYTYNILINCFCKMGRVSHG---FVVLGRILRSCFTPNAVTFTSLIKGL 97
GL PD Y Y + +C+ G ++H FV++ LR C A T+T+L+ GL
Sbjct: 96 TSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMP--LRGCLR-TAFTYTALLHGL 152
Query: 98 CAESRIMEAAALFTKLRVFGC-----------------------------------EPNV 122
+ EA A+F +R C EPN+
Sbjct: 153 LGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNI 212
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQ 170
YN LI+G G AL +FE M V G V++A LF +
Sbjct: 213 VVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSR 272
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + + P+VVTYT++I+G C A LL M G+ PN TF+V++D LCK K
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREK 332
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
++EA L +++ GV+ N VY +L+DG C TG+++ A EL M S G SYS
Sbjct: 333 VEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSS 392
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI+G C+ K++ A + +M+ KGI+ V Y + L E K+FD+M G
Sbjct: 393 LIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATG 452
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ D TY F+ C+ + +A + + ++ YN LI G
Sbjct: 453 INPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRG 501
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 180/409 (44%), Gaps = 26/409 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +N L + L +F+ ++ P++ TY LI+ CK G+V V+
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R++ + PN VT+T+LI+G C E + A L + G PN +T++ LI+ L +
Sbjct: 270 FSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329
Query: 135 TGHTIVALNLFEEMASGNGEFGVE-------------GFVDKAKELFLQMKDENINPDVV 181
+ LF G E G +D A EL +M E PD
Sbjct: 330 R-EKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAH 388
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+Y+S+I G C ++A +L +MM++G+Q + VT+ +I+DEL + + ++ D M
Sbjct: 389 SYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM 448
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
I G+ P+ Y + +C GR+ A+ + V M G + +Y+ LI GY +
Sbjct: 449 IATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLV 508
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLF------------VVLFEIHQVERAFKLFDEMQRD 349
A S + M+ KG KP+ Y L V +++I ++ L +++
Sbjct: 509 SQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITER 568
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
+ Y FI LC+ + EA F ++ Y +ID
Sbjct: 569 QLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIID 617
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 181/414 (43%), Gaps = 32/414 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L H L + + GL P+ +T+++LI+ CK +V +
Sbjct: 280 PNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLF 339
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
LG +++ N V +TSLI GLC +I A L K+ G P+ +Y++LI+GL R
Sbjct: 340 LGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCR 399
Query: 135 TGHTIVALNLFEEMASGN----------------GEFGVEGFVDKAKELFLQMKDENINP 178
A + E+M E G EG K++F +M INP
Sbjct: 400 QKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEG----PKKIFDKMIATGINP 455
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D+VTYT +R +C +A+ ++++M+D+GV PN+VT+N ++ G + +A
Sbjct: 456 DIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTF 515
Query: 239 DLMIQIGVRPNAFVYNTLM---------DGFCLTGRVNRAKELFVSMESMGCTHTVFS-- 287
++M+ G +PN Y L+ D ++ K+L V +E + +
Sbjct: 516 EVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAAD 575
Query: 288 -YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
YS I C+ +E A + M + + P +Y ++ + + A L D M
Sbjct: 576 IYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSM 635
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ G +YR I LC+ A E+F L + + D + LI GL
Sbjct: 636 TKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGL 689
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 147/381 (38%), Gaps = 62/381 (16%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVL---- 75
+ L L K D L +++ S G PD ++Y+ LI+ C+ ++S ++L
Sbjct: 355 YTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMM 414
Query: 76 -------------------------------GRILRSCFTPNAVTFTSLIKGLCAESRIM 104
+++ + P+ VT+T ++ C E R+
Sbjct: 415 EKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRME 474
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFV--- 161
+A ++ ++ G PN+ TYNTLI G G A + FE M + + +
Sbjct: 475 DAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLL 534
Query: 162 ---------DKAKELF--LQMKDENINPDVVT----------YTSVIRGFCYANDWNEAK 200
D + +++ MKD + + +T Y+ IR C + EAK
Sbjct: 535 RLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAK 594
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
+ M + + P+ + I+D C+ + +A LLD M + G P+ Y ++
Sbjct: 595 HFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSL 654
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
C G AKE+F + + + ILI G + + SL M G +P
Sbjct: 655 CEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSN 714
Query: 321 VIYNTL---FVVLFEIHQVER 338
I + V E+ ++ R
Sbjct: 715 TINAMITGEITVTNEVQEIAR 735
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 199/397 (50%), Gaps = 12/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++NIL + ++ +++ G P+L TY +LI C++G V +
Sbjct: 349 PDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKL 408
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ F + ++ T L+ LC ++ A LF ++ G P++ TY+TLI+GL +
Sbjct: 409 YKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCK 468
Query: 135 TGHTIVALNLFEEMAS----------GNGEFGV--EGFVDKAKELFLQMKDENINPDVVT 182
G A+ L+E+M S G G+ +G + +A+ F + N++ D++
Sbjct: 469 QGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIIL 528
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I G+ + EA L ++ ++G+ P +VTFN +M C N K+ +A RLLD +
Sbjct: 529 YNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIK 588
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ PNA Y TLM+ +C G + EL M++ T +Y+++I G CK +++
Sbjct: 589 LHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQ 648
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
+ L +M + G+ PD V YNT+ + + +AF+L+D+M + + TY I
Sbjct: 649 ESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILI 708
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+G C + +A L +L+ K L+ AY +I
Sbjct: 709 NGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKA 745
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 181/384 (47%), Gaps = 23/384 (5%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ S +L G L K++ D LF + + GL PDL TY+ LI+ CK G V ++
Sbjct: 421 IISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYE 480
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ + PN++ +++ GLC + +I +A F L ++ YN +I+G + G
Sbjct: 481 KMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRG 540
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+T A+ L++ Q+ ++ I+P +VT+ S++ GFC
Sbjct: 541 NTREAVKLYK-----------------------QLGEKGISPTIVTFNSLMYGFCINRKL 577
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
++A+ LL + G++PN VT+ +M+ C+ G M LL M + P Y +
Sbjct: 578 SQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVV 637
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ G C ++ + +L M+++G T SY+ +I +CK +++ A LY +ML +
Sbjct: 638 IKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNL 697
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+P V YN L ++ A L +Q V + + Y T I C + +AV
Sbjct: 698 EPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVV 757
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
FR + E+ IR Y+ +I L
Sbjct: 758 YFRQMVEKGFEVSIRDYSAVIGRL 781
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 156/317 (49%), Gaps = 24/317 (7%)
Query: 84 TPNAVTFTSLI-KGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
TP + +S++ GLC +SR +A F +P+V ++NT+++
Sbjct: 242 TPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMS------------ 289
Query: 143 NLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
+ GFVD AK F M + PD +Y +I G C A EA L
Sbjct: 290 -----------RYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDL 338
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
+M + G++P++VT+N++ G ++ A ++ M+ G PN Y L+ G C
Sbjct: 339 KNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQ 398
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G V A +L+ M S G ++ S ++L+ CK+++++ A L+ EM + G++PD++
Sbjct: 399 IGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLIT 458
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
Y+TL L + +V++A L+++M + + ++ + + GLC+ I +A F L
Sbjct: 459 YSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLI 518
Query: 383 ILKCELDIRAYNCLIDG 399
LDI YN +IDG
Sbjct: 519 TSNLSLDIILYNIMIDG 535
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 177/380 (46%), Gaps = 12/380 (3%)
Query: 31 KHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTF 90
+H + + ++ + +G YT +I+++ C+ R + F P+ V+F
Sbjct: 225 RHSNIMWDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSF 284
Query: 91 TSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMAS 150
+++ C + A + F + G P+ ++YN LI+GL G AL+L +M +
Sbjct: 285 NTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMEN 344
Query: 151 GNGE------------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
E F + G ++ A + +M + NP++VTYT +I G C + E
Sbjct: 345 HGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEE 404
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A L EM+ G Q ++++ V++ LCK+ ++D A +L M G+RP+ Y+TL+
Sbjct: 405 ALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIH 464
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G C G V +A L+ M S + ++ G C+ +I A + +++ +
Sbjct: 465 GLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSL 524
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
D+++YN + + A KL+ ++ G++ T+ + + G C N + +A L
Sbjct: 525 DIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLL 584
Query: 379 RTLRILKCELDIRAYNCLID 398
T+++ E + Y L++
Sbjct: 585 DTIKLHGLEPNAVTYTTLMN 604
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 146/325 (44%), Gaps = 70/325 (21%)
Query: 98 CAESR---IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM-ASGNG 153
CA SR + +A + K++ ++ TYN+L LY H+ + +++ E+ SG
Sbjct: 187 CAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSL---LYNLRHSNIMWDVYNEIKVSGTP 243
Query: 154 EFGVEGFVDKAKELFLQMKDENINPDVVTYTS--VIRGFCYANDWNEAKCLLIEMMDQGV 211
+ YTS V+ G C + + +A + +
Sbjct: 244 Q--------------------------SEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEF 277
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
QP+VV+FN IM CK G +D A +M++ G+ P+A+ YN L+ G C+ G + A +
Sbjct: 278 QPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALD 337
Query: 272 LFVSMESMG-----CTHTVF------------------------------SYSILINGYC 296
L ME+ G T+ + +Y++LI G+C
Sbjct: 338 LKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHC 397
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
+ +E AL LY EM+S G + ++ L L + QV+ AFKLF EM+ +G+ D
Sbjct: 398 QIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLI 457
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTL 381
TY T I GLCK + +A+ L+ +
Sbjct: 458 TYSTLIHGLCKQGEVQQAILLYEKM 482
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 185/386 (47%), Gaps = 28/386 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +F L + +D L + ++ S+ DL + LIN K R+ +
Sbjct: 390 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 449
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L I + PN +T+TS+I G C ++ A + + GC+PN +TYN+L+ GL +
Sbjct: 450 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 509
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ + KA L +M+ + I P+V+TYT++++G C +
Sbjct: 510 -----------------------DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEH 546
Query: 195 DWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
D++ A L EMM+Q G++P+ + V+ D LCK G+ +EA +++ GV Y
Sbjct: 547 DFDNA-FRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYY 602
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
TL+DGF G + A L M GCT ++YS+L++ CK K + AL + +M
Sbjct: 603 TTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSL 662
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+GIK + Y L + + + A ++++EM G TY FI+ CK + +
Sbjct: 663 RGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLED 722
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
A +L + D+ YN LIDG
Sbjct: 723 AEDLILKMEREGVAPDVVTYNILIDG 748
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 171/334 (51%), Gaps = 13/334 (3%)
Query: 53 YTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 112
Y+Y ILI C+ V V+ + R +PN FT LI GLC R+ +A LF
Sbjct: 254 YSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDA 313
Query: 113 LRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG--------EFGVEGFVDK- 163
+ G P+V TYN +I G + G AL + +E+ NG + G D+
Sbjct: 314 MPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI-KELMEKNGCHPDDWTYNTLIYGLCDQK 372
Query: 164 ---AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
A+EL E P VVT+T++I G+C A +++A + +MM + ++ F
Sbjct: 373 TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGK 432
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ L K ++ EA LL+ + G+ PN Y +++DG+C +G+V+ A E+ ME G
Sbjct: 433 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 492
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
C ++Y+ L+ G K+K++ A++L +M GI P+V+ Y TL + H + AF
Sbjct: 493 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 552
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
+LF+ M+++G+ D Y D LCK EA
Sbjct: 553 RLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA 586
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 193/392 (49%), Gaps = 25/392 (6%)
Query: 9 NMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV 68
+ R + P C +N LA+ + + ++ +L GL PD TYN +I +CK G +
Sbjct: 141 SARLALSPKC-YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDL 199
Query: 69 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTL 128
+ +L P T +L+ G C + +A LF + + GC+ N ++Y L
Sbjct: 200 TTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTIL 259
Query: 129 INGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
I GL V +A LFL MK + +P+V +T +I
Sbjct: 260 IQGLCEA-----------------------KCVREALVLFLMMKRDGCSPNVRAFTFLIS 296
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
G C + +A+ L M GV P+V+T+N ++ K G+M++A ++ +LM + G P
Sbjct: 297 GLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHP 356
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
+ + YNTL+ G C + A+EL + G T TV +++ LINGYC ++ + AL +
Sbjct: 357 DDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMK 415
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
+M+S K D+ ++ L L + +++ A +L +E+ +G+ + TY + IDG CK+
Sbjct: 416 NKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKS 475
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ A+E+ + + C+ + YN L+ GL
Sbjct: 476 GKVDIALEVLKMMERDGCQPNAWTYNSLMYGL 507
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 174/360 (48%), Gaps = 11/360 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F L L K L +++ GL P++ TY +I+ +CK G+V VL +
Sbjct: 430 FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMME 489
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
R PNA T+ SL+ GL + ++ +A AL TK++ G PNV TY TL+ G
Sbjct: 490 RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFD 549
Query: 140 VALNLFEEMASGNG----EFGVEGFVD------KAKELFLQMKDENINPDVVTYTSVIRG 189
A LFE M NG E D +A+E + + + + V YT++I G
Sbjct: 550 NAFRLFE-MMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDG 608
Query: 190 FCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
F A + + A L+ M+D+G P+ T++V++ LCK +++EA +LD M G++
Sbjct: 609 FSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 668
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
F Y L+D G+ + AK ++ M S G + +Y++ IN YCK +E A L
Sbjct: 669 IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLIL 728
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
+M +G+ PDVV YN L + ++RAF M + WTY + L K +
Sbjct: 729 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGN 788
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 185/402 (46%), Gaps = 21/402 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG-FV 73
P ++N + K T F+ L GL P+ +T N L+ +C+ G + ++
Sbjct: 181 PDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWL 240
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
L L C N ++T LI+GLC + EA LF ++ GC PNV + LI+GL
Sbjct: 241 FLMMPLMGC-QRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLC 299
Query: 134 RTGHTIVALNLFEEMAS---------------GNGEFGVEGFVDKAKELFLQMKDENINP 178
++G A LF+ M G + G K KEL M+ +P
Sbjct: 300 KSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKEL---MEKNGCHP 356
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D TY ++I G C EA+ LL + +G P VVTF +++ C K D+A R+
Sbjct: 357 DDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMK 415
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
+ M+ + + V+ L++ R+ AKEL + + G V +Y+ +I+GYCK+
Sbjct: 416 NKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKS 475
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+++ AL + M G +P+ YN+L L + ++ +A L +MQ+DG+ + TY
Sbjct: 476 GKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITY 535
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
T + G C A LF + + D AY L D L
Sbjct: 536 TTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDAL 577
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 169/415 (40%), Gaps = 33/415 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L +D LF+ + GL PD + Y +L + CK GR +
Sbjct: 530 PNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF 589
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
I+R V +T+LI G AA L ++ GC P+ +TY+ L++ L +
Sbjct: 590 ---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCK 646
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
AL + ++M+ E EG D AK ++ +M P T
Sbjct: 647 QKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATT 706
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT I +C +A+ L+++M +GV P+VVT+N+++D G +D A L M+
Sbjct: 707 YTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV 766
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAK-----------------ELFVSMESMGCTHTV 285
PN + Y L+ L G + + +L M G TV
Sbjct: 767 GASCEPNYWTYCLLLKHL-LKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTV 825
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
+YS LI G+CK +E A L M KG+ P+ IY L + E+A
Sbjct: 826 TTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSI 885
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
M G +YR + GLC + LF L L D A+ L DGL
Sbjct: 886 MSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGL 940
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 133/311 (42%), Gaps = 28/311 (9%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++++L L K K + L + +++ G+ ++ Y ILI+ + G+ H +
Sbjct: 632 PDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRM 691
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ S P+A T+T I C E R+ +A L K+ G P+V TYN LI+G
Sbjct: 692 YNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGH 751
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF----------------------------VDKAKE 166
G+ A + + M + E + +D +
Sbjct: 752 MGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQ 811
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
L +M +NP V TY+S+I GFC A EA LL M +G+ PN + +++ C
Sbjct: 812 LLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCC 871
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
++A + +M + G +P Y L+ G C G + K LF + +G H
Sbjct: 872 DTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEV 931
Query: 287 SYSILINGYCK 297
++ IL +G K
Sbjct: 932 AWKILNDGLLK 942
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 169/365 (46%), Gaps = 23/365 (6%)
Query: 35 TVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 94
T+ + + G ++Y +NIL+N FCK G +S V I + P V+F +LI
Sbjct: 223 TIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLI 282
Query: 95 KGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE 154
G C + E L ++ P+VFTY+ LIN L +
Sbjct: 283 NGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCK-------------------- 322
Query: 155 FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
E +D A LF +M + P+ V +T++I G + + K +M+ +G+QP+
Sbjct: 323 ---ENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPD 379
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
+V +N +++ CKNG + A ++D MI+ G+RP+ Y TL+DGFC G V A E+
Sbjct: 380 IVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRK 439
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
M+ G +S L+ G CK + A EML GIKPD V Y + +
Sbjct: 440 EMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKG 499
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
+ FKL EMQ DG TY ++GLCK + A L + + D YN
Sbjct: 500 DAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYN 559
Query: 395 CLIDG 399
L++G
Sbjct: 560 TLLEG 564
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 185/369 (50%), Gaps = 17/369 (4%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P V FNIL K + +F + L P + ++N LIN +CK+G + GF
Sbjct: 237 PLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFR 296
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ ++ +S P+ T+++LI LC E+++ A LF ++ G PN + TLI+G
Sbjct: 297 LKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHS 356
Query: 134 RTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDV 180
R G + +++M S NG F G + A+ + M + PD
Sbjct: 357 RNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNG-FCKNGDLVAARNIVDGMIRRGLRPDK 415
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+TYT++I GFC D A + EM G++ + V F+ ++ +CK G++ +A R L
Sbjct: 416 ITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALRE 475
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M++ G++P+ Y +MD FC G +L M+S G +V +Y++L+NG CK +
Sbjct: 476 MLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQ 535
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
++ A L ML+ G+ PD + YNTL L H+ + K + + G+ AD +Y++
Sbjct: 536 MKNADMLLDAMLNIGVVPDDITYNTL---LEGHHRHANSSKRYIQKPEIGIVADLASYKS 592
Query: 361 FIDGLCKNS 369
++ L + S
Sbjct: 593 IVNELDRAS 601
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 160/351 (45%), Gaps = 22/351 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD + R P V SFN L K + D L ++ + PD++TY+ LIN
Sbjct: 262 VFDE-ITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINAL 320
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK ++ + + + PN V FT+LI G I + K+ G +P++
Sbjct: 321 CKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDI 380
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
YNTL+NG + G + A N+ + M F G V+ A E+ +
Sbjct: 381 VLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKE 440
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M I D V +++++ G C +A+ L EM+ G++P+ VT+ ++MD CK G
Sbjct: 441 MDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGD 500
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+LL M G P+ YN L++G C G++ A L +M ++G +Y+
Sbjct: 501 AQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNT 560
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
L+ G+ ++ + Y + GI D+ Y ++ +++++RA K
Sbjct: 561 LLEGHHRH---ANSSKRYIQKPEIGIVADLASYKSI------VNELDRASK 602
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 132/258 (51%), Gaps = 7/258 (2%)
Query: 143 NLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
NL + M N + GF ++++ D +V + ++ FC + ++A+ +
Sbjct: 210 NLLDRMMKLNPTGTIWGF-------YMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKV 262
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
E+ + +QP VV+FN +++ CK G +DE RL M + RP+ F Y+ L++ C
Sbjct: 263 FDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCK 322
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
+++ A LF M G ++ LI+G+ +N EI+ Y +MLSKG++PD+V+
Sbjct: 323 ENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVL 382
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
YNTL + + A + D M R G+ D TY T IDG C+ + A+E+ + +
Sbjct: 383 YNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMD 442
Query: 383 ILKCELDIRAYNCLIDGL 400
ELD ++ L+ G+
Sbjct: 443 QNGIELDRVGFSALVCGM 460
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 133/466 (28%), Positives = 201/466 (43%), Gaps = 84/466 (18%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNS----------------------------- 45
PP+ N L LA+++ + + SL R+ +
Sbjct: 39 PPLRCLNTLLMALARHRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSL 98
Query: 46 --TGLFPDLYTYNILINCFCKMGRVSHG---FVVLGRILRSCFTPNAVTFTSLIKGLCAE 100
GL PD Y Y + +C+ G ++H FV++ LR C A T+T+L+ GL
Sbjct: 99 LHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMP--LRGCLR-TAFTYTALLHGLLGA 155
Query: 101 SRIMEAAALFTKLRVFGC-----------------------------------EPNVFTY 125
+ EA A+F +R C EPN+ Y
Sbjct: 156 GMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVY 215
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKD 173
N LI+G G AL +FE M V G V++A LF +M +
Sbjct: 216 NALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVE 275
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
+ P+VVTYT++I+G C A LL M G+ PN TF+V++D LCK K++E
Sbjct: 276 AGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEE 335
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A L +++ GV+ N VY +L+DG C TG+++ A EL M S G SYS LI+
Sbjct: 336 AQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLID 395
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
G C+ K++ A + +M+ KGI+ V Y + L E K+FD+M G+
Sbjct: 396 GLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINP 455
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
D TY F+ C+ + +A + + ++ YN LI G
Sbjct: 456 DIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRG 501
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 173/384 (45%), Gaps = 17/384 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +N L + L +F+ ++ P++ TY LI+ CK G+V V+
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R++ + PN VT+T+LI+G C E + A L + G PN +T++ LI+ L +
Sbjct: 270 FSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329
Query: 135 TGHTIVALNLFEEMASGNGEFGVE-------------GFVDKAKELFLQMKDENINPDVV 181
+ LF G E G +D A EL +M E PD
Sbjct: 330 R-EKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAH 388
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+Y+S+I G C ++A +L +MM++G+Q + VT+ +I+DEL + + ++ D M
Sbjct: 389 SYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM 448
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
I G+ P+ Y + +C GR+ A+ + V M G + +Y+ LI GY +
Sbjct: 449 IATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLV 508
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA---FKLFDEMQRDGVAADTWTY 358
A S + M+ KG KP+ Y L ++ + + + +K+ D D +
Sbjct: 509 SQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYDEIVW 568
Query: 359 RTFIDGLCKNSYIVEAVELFRTLR 382
+ I GL + + E L ++
Sbjct: 569 KILIYGLLQKGSVAEFSSLLSVMK 592
>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
Length = 933
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 188/396 (47%), Gaps = 12/396 (3%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P V +N L + D + + G+ P++ TY I +C+ V F
Sbjct: 201 PMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFD 260
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ ++R+ + VT ++L+ GLC + R EA ALF ++ G PN TY TLI+ L
Sbjct: 261 LYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLA 320
Query: 134 RTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
+ G L+L EM S G +G D+ K+ +N++ + V
Sbjct: 321 KAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGV 380
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT +I C A++ +EA+ +L+EM ++ + PNVVTF+ +++ K G +D+A+ +M
Sbjct: 381 TYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMM 440
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G+ PN Y TL+DGF + A E++ M G F L+NG +N +I
Sbjct: 441 KERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKI 500
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A++L+ + G+ D V Y TL LF+ + AFK E+ + D Y F
Sbjct: 501 EEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVF 560
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
I+ LC EA + +R + + D YN +I
Sbjct: 561 INCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMI 596
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 170/381 (44%), Gaps = 19/381 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ L L K T + L + PD YN+ INC C +G+ +L +
Sbjct: 521 NYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEM 580
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
P+ T+ ++I C + +A L ++++ +PN+ TYNTL+ GL+ TG
Sbjct: 581 RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAV 640
Query: 139 IVALNLFEEMASGNGEFGVEGF--------------VDKAKELFLQMKDENINPDVVTYT 184
A L EM S F +D ++ M + ++ D+ Y
Sbjct: 641 EKAKYLLNEMVSAG--FSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYN 698
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
++++ CY +A +L EM+ G+ P+ +TFN ++ CK+ +D A M+
Sbjct: 699 TLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQ 758
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
+ PN +NTL+ G GR+ A + + ME G +Y IL+ G+ K A
Sbjct: 759 NISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEA 818
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
+ LY EM+ KG P V YN L + + +A +LF +MQ+ GV + TY + G
Sbjct: 819 MRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878
Query: 365 LCKNSYIVEAVELFRTLRILK 385
S I E+ + L+ +K
Sbjct: 879 W---SRIRNGTEVKKCLKDMK 896
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 189/431 (43%), Gaps = 47/431 (10%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ ++ L L K D V + S L + TY +LI+ CK V VL
Sbjct: 344 LVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLL 403
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ +PN VTF+S+I G + +A ++ G PNV TY TLI+G ++
Sbjct: 404 EMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQ 463
Query: 137 HTIVALNLFEEM----------------------------------ASGNG----EFGVE 158
AL ++ +M ASG+G
Sbjct: 464 GQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYT 523
Query: 159 GFVD---KAKELFLQMK------DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
+D KA ++ K D N+ PD V Y I C + EAK +L EM +
Sbjct: 524 TLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNM 583
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
G++P+ T+N ++ C+ G+ +A +LL M ++PN YNTL+ G TG V +A
Sbjct: 584 GLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKA 643
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
K L M S G + + ++ ++ +++ ++ L ++ M++ G+ D+ +YNTL V
Sbjct: 644 KYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQV 703
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
L +A + +EM G+A DT T+ I G CK+S++ A + + +
Sbjct: 704 LCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPN 763
Query: 390 IRAYNCLIDGL 400
I +N L+ GL
Sbjct: 764 IATFNTLLGGL 774
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 173/382 (45%), Gaps = 37/382 (9%)
Query: 23 LFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSC 82
L L +N + ++LFK + +GL D Y LI+ K G + F ++
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
P+AV + I LC + EA ++ T++R G +P+ TYNT+I R G T AL
Sbjct: 550 MLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609
Query: 143 NLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
L EM K +I P+++TY +++ G +AK L
Sbjct: 610 KLLHEM-----------------------KMSSIKPNLITYNTLVAGLFGTGAVEKAKYL 646
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
L EM+ G P+ +T ++ ++ ++D + + M+ G+ + VYNTL+ C
Sbjct: 647 LNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCY 706
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G +A + M G +++ LI G+CK+ ++ A + Y +ML + I P++
Sbjct: 707 HGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIAT 766
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
+NTL L + ++ A + EM++ G+ + TY + G K S VEA+ L+
Sbjct: 767 FNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLY---- 822
Query: 383 ILKCEL-------DIRAYNCLI 397
CE+ + YN LI
Sbjct: 823 ---CEMVGKGFVPKVSTYNALI 841
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 175/405 (43%), Gaps = 25/405 (6%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ RP+ P S N L + + ++L + P YNIL+
Sbjct: 66 IRFRPADP--ASLNALLYSHCRLRLLRPAIALLRSSR-----PTTVAYNILLAALSDH-- 116
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP-NVFTYN 126
+H VL + + + VT +L+ GLC ++ AAAL R G +V +N
Sbjct: 117 -AHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALAD--RGGGIHALDVIGWN 173
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDE 174
TLI G R G T AL++ + M + V G+ VD A+ + MK+
Sbjct: 174 TLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEA 233
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
++P+V TYT I +C EA L M+ GV +VVT + ++ LC++G+ EA
Sbjct: 234 GVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEA 293
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
L M ++G PN Y TL+D GR L M S G + +Y+ L++
Sbjct: 294 YALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDW 353
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
K + + LS + + V Y L L + H V+ A ++ EM+ ++ +
Sbjct: 354 LGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPN 413
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
T+ + I+G K + +A E R ++ ++ Y LIDG
Sbjct: 414 VVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDG 458
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 155/379 (40%), Gaps = 12/379 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +N+ CL + S+ + + GL PD TYN +I C+ G + +
Sbjct: 552 PDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKL 611
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + S PN +T+ +L+ GL + +A L ++ G P+ T+ ++ +
Sbjct: 612 LHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQ 671
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
+ V L++ E M + + G KA + +M I PD +T
Sbjct: 672 SRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTIT 731
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ ++I G C ++ + A +M+ Q + PN+ TFN ++ L G++ EA +L M
Sbjct: 732 FNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEME 791
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ PN Y+ L+ G A L+ M G V +Y+ LI+ + K +
Sbjct: 792 KSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMT 851
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ +M +G+ P Y+ L I K +M+ G + T
Sbjct: 852 QAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFIC 911
Query: 363 DGLCKNSYIVEAVELFRTL 381
K +A L + L
Sbjct: 912 RAFSKPGMTWQAQRLLKNL 930
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 104/223 (46%), Gaps = 4/223 (1%)
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P V Y ++ +D A +L EM +GV + VT N ++ LC+NG++D A+ L
Sbjct: 101 PTTVAYNILLAAL---SDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL 157
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
D I + +NTL+ G+C G A + M + G V Y+ L+ G+C+
Sbjct: 158 ADRGGGIHAL-DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCR 216
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
+++ A + M G+ P+V Y V VE AF L++ M R+GV D T
Sbjct: 217 AGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVT 276
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ GLC++ EA LFR + + + Y LID L
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSL 319
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 114/249 (45%), Gaps = 15/249 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
I ++M+N + +N L L + + + + +G+ PD T+N LI
Sbjct: 681 IHEWMMNAGLHAD-ITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGH 739
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK + + F ++L +PN TF +L+ GL + RI EA + ++ G EPN
Sbjct: 740 CKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNN 799
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFL 169
TY+ L+ G + + + A+ L+ EM G G +F G + +AKELF
Sbjct: 800 LTYDILVTGHGKQSNKVEAMRLYCEMV-GKGFVPKVSTYNALISDFTKAGMMTQAKELFK 858
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
M+ ++P TY ++ G+ + E K L +M ++G P+ T + I K G
Sbjct: 859 DMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPG 918
Query: 230 KMDEASRLL 238
+A RLL
Sbjct: 919 MTWQAQRLL 927
>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
Length = 601
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 193/398 (48%), Gaps = 15/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S+ ++ L ++ D ++L + + ++G+ D+ TY LI C + +
Sbjct: 113 PNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALEL 172
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
LG + S PN + ++ L++G C R + + +F ++ G EP+V + I+ L +
Sbjct: 173 LGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCK 232
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G A+ + + M E V EG V +A L +M D+ + PDVVT
Sbjct: 233 KGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVT 292
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMM--DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
Y ++I G + + A LL EM+ D V+P+VVTFN ++ LCK G+M +A + ++
Sbjct: 293 YNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREM 352
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M + G N YN L+ GF +VN A L + S G F+YSILING+ K E
Sbjct: 353 MAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWE 412
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
++ A M +GI+ ++ Y L L ++ +E+A LF+EM + D Y T
Sbjct: 413 VDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMN-CGLDAVAYST 471
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
+ G CK+ I A +L + + D Y+ LI+
Sbjct: 472 MMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILIN 509
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 189/408 (46%), Gaps = 48/408 (11%)
Query: 10 MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGL---------FPDL---YTYNI 57
+RP+ P L + D L +RL + + PD+ +YNI
Sbjct: 29 VRPAAP-------FLAVLLRRGRADAAALLNRRLRAAPVTEACSLLSALPDVRDAVSYNI 81
Query: 58 LINCFCKMG-RVSHGFVVLGRILRSCFT---PNAVTFTSLIKGLCAESRIMEAAALFTKL 113
++ C+ G + +L + R PNAV++T +++GLCA R EA AL +
Sbjct: 82 VLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSM 141
Query: 114 RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKD 173
+ G +V TY TLI GL +D A EL +M
Sbjct: 142 QASGVRADVVTYGTLIRGLCDAAE-----------------------LDGALELLGEMCG 178
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
++P+V+ Y+ ++RG+C + W + + EM GV+P+V+ F +D+LCK G++ +
Sbjct: 179 SGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGK 238
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A ++ D+M+Q G+ PN YN L++ C G V A L M+ G V +Y+ LI
Sbjct: 239 AVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIA 298
Query: 294 GYCKNKEIEGALSLYGEMLSKG--IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
G E++GA+ L EM+ ++PDVV +N++ L +I ++ +A + + M G
Sbjct: 299 GLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGC 358
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ TY I G + + A+ L L E D Y+ LI+G
Sbjct: 359 MCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILING 406
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 182/389 (46%), Gaps = 15/389 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L ++ + V +F+ ++ G+ PD+ + I+ CK GR+ V
Sbjct: 183 PNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKV 242
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ PN VT+ LI LC E + EA AL ++ G P+V TYNTLI GL
Sbjct: 243 KDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSG 302
Query: 135 TGHTIVALNLFEEMASGNGEFGVE--------------GFVDKAKELFLQMKDENINPDV 180
A+ L EEM G+ + G + +A + M + ++
Sbjct: 303 VLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNL 362
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY +I GF + N A L+ E++ G++P+ T++++++ K ++D A L
Sbjct: 363 VTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRT 422
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M Q G+R F Y L+ C G + +A LF M+ M C +YS ++ G CK+ +
Sbjct: 423 MTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMD-MNCGLDAVAYSTMMYGACKSGD 481
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
I+ A L +ML +G+ PD V Y+ L + ++ +E A ++ +M G D + +
Sbjct: 482 IKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDS 541
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELD 389
I G I + ++L +R +D
Sbjct: 542 LIKGYSAEGQINKILDLIHEMRAKNVAID 570
>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
Length = 600
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 171/365 (46%), Gaps = 46/365 (12%)
Query: 38 SLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 97
+L R+++ G+ D ++YN +I +CK G V R+ + + VT+ SLI GL
Sbjct: 205 ALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMCVRDRMDKEGIRADTVTWNSLIHGL 264
Query: 98 CAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV 157
C R+ EAA LFT++ P+ TY TLI+G R G+ EE GE
Sbjct: 265 CKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGN-------IEEAVKLRGEMEA 317
Query: 158 EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
G + P V TY +++R C E LL EM ++ VQ + VT
Sbjct: 318 TGML----------------PGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVT 361
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
N +++ CK G M A ++ M++ G++ N F Y L+ GFC ++ AKE F M
Sbjct: 362 CNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMV 421
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
G + +S L++G+CK + L + E++ +G+ PD +Y +L L V+
Sbjct: 422 DAGFSPNYSVFSWLVDGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLIRRLCRKGLVD 481
Query: 338 RAFKLFDEMQRDGVAADTWTYRTF----------------IDGLCKNSYIVEAVELFRTL 381
+A K+FD+MQ G+ D+ Y T +DG+ KN +L+ T
Sbjct: 482 QAQKVFDQMQSKGLVGDSLVYATLAYTYLTEGKPVAASNTLDGMAKN-------QLYITP 534
Query: 382 RILKC 386
+I C
Sbjct: 535 QIYNC 539
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 178/380 (46%), Gaps = 24/380 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M R P + L LA+ + T +F + GL + YN +++
Sbjct: 136 VFDQM-RARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAVSTHVYNAMLHVC 194
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K G + ++ R+ + + ++ ++I C + EA + ++ G +
Sbjct: 195 LKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMCVRDRMDKEGIRADT 254
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
T+N+LI+GL + G A LF EMA+ PD VT
Sbjct: 255 VTWNSLIHGLCKYGRVKEAAQLFTEMAAAQA-----------------------TPDNVT 291
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT++I G+C A + EA L EM G+ P V T+N I+ +LC++GKM E ++LL+ M
Sbjct: 292 YTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMD 351
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ V+ + NTL++ +C G + A ++ M G F+Y LI+G+CK KE++
Sbjct: 352 ERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELD 411
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A + +M+ G P+ +++ L + + + + DE+ + G+ D YR+ I
Sbjct: 412 EAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLI 471
Query: 363 DGLCKNSYIVEAVELFRTLR 382
LC+ + +A ++F ++
Sbjct: 472 RRLCRKGLVDQAQKVFDQMQ 491
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 137/307 (44%), Gaps = 23/307 (7%)
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN 152
L+ L +R +A +F ++R G P+ L+ L R T A +F+EMA
Sbjct: 120 LVLVLAQSARPHDALRVFDQMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAG 179
Query: 153 GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
V V Y +++ A D A+ L+ M GV
Sbjct: 180 --LAVSTHV---------------------YNAMLHVCLKAGDAARAEALVTRMDAAGVP 216
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
+ ++N ++ CK G EA + D M + G+R + +N+L+ G C GRV A +L
Sbjct: 217 LDRFSYNTVIALYCKKGMRYEAMCVRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQL 276
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
F M + T +Y+ LI+GYC+ IE A+ L GEM + G+ P V YN + L E
Sbjct: 277 FTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCE 336
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
+++ +L +EM V AD T T I+ CK ++ A ++ + + +L+
Sbjct: 337 DGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFT 396
Query: 393 YNCLIDG 399
Y LI G
Sbjct: 397 YKALIHG 403
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 129/294 (43%), Gaps = 12/294 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N L L K LF + + PD TY LI+ +C+ G + + G +
Sbjct: 256 TWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEM 315
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ P T+ ++++ LC + ++ E L ++ + + T NTLIN + GH
Sbjct: 316 EATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHM 375
Query: 139 IVALNLFEEMASGNGEFG-------VEGF-----VDKAKELFLQMKDENINPDVVTYTSV 186
A + ++M + + GF +D+AKE F QM D +P+ ++ +
Sbjct: 376 TSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPNYSVFSWL 435
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
+ GFC N+ + + E+M +G+ P+ + ++ LC+ G +D+A ++ D M G+
Sbjct: 436 VDGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQKVFDQMQSKGL 495
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
++ VY TL + G+ A M T Y+ L Y KE
Sbjct: 496 VGDSLVYATLAYTYLTEGKPVAASNTLDGMAKNQLYITPQIYNCLCTSYADEKE 549
>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
Length = 381
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 173/357 (48%), Gaps = 13/357 (3%)
Query: 37 LSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 96
+ L + + G P++ TYN++I+ C+ G V +L + PN V + +++KG
Sbjct: 1 MELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKG 60
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG 156
LC+ R ++A L ++ C PN T N ++N L R G E+M+
Sbjct: 61 LCSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTAN 120
Query: 157 V------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
V +G VD A EL M+ PD+VTY ++++G C A+ W +A+ L+I
Sbjct: 121 VVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMI 180
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
+M P+ VTFN I+ LC+ G + +A + M + G PN+ Y+T++ G G
Sbjct: 181 KMSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAG 240
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
++ +A EL M S G +T Y +L K +IE + + ++ GI P V++N
Sbjct: 241 KMEQALELLNEMASKG-YNTDKMYQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFN 299
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
T+ +VL + + A + +M G D TY I+GL Y+ EA EL L
Sbjct: 300 TVLLVLCRNGKTDYAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEARELVSRL 356
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 118/235 (50%)
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
EL M+ E P+VVTY +I C D ++A+ LL + +G +PN V +N ++ L
Sbjct: 2 ELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGL 61
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
C + +A LLD M++ PN N +++ G + + M GCT V
Sbjct: 62 CSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANV 121
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
+Y+ +I+G C+ ++ AL L M S G KPD+V YNTL L Q E A +L +
Sbjct: 122 VTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIK 181
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
M ++ D T+ T I LC+ I++A E+F+ + C + Y+ +I GL
Sbjct: 182 MSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGL 236
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 159/343 (46%), Gaps = 16/343 (4%)
Query: 7 MLNMRPS---PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
+LN PS P ++N + L + + L + P+ T N+++N
Sbjct: 38 LLNSLPSRGCKPNTVNYNTVLKGLCSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLS 97
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ G + L ++ + T N VT+ ++I G+C + + A L + ++ FGC+P++
Sbjct: 98 RKGLLQKVTRYLEKMSKHGCTANVVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIV 157
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASG-----NGEFGV-------EGFVDKAKELFLQM 171
TYNTL+ GL A L +M+ N F +G + +A E+F QM
Sbjct: 158 TYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQM 217
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
++ NP+ TY+++I G A +A LL EM +G + + + ++ + L K K+
Sbjct: 218 PEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMASKGYNTDKM-YQLLTESLNKEDKI 276
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
+E +++ + G+ P ++NT++ C G+ + A ++ M S GC +Y IL
Sbjct: 277 EEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDYAIDVLADMVSYGCMPDELTYIIL 336
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
I G ++ A L + S+ + + +I N ++ IH
Sbjct: 337 IEGLSYEGYLQEARELVSRLCSRDVLSNSLIKNEALLLDQNIH 379
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 191/430 (44%), Gaps = 47/430 (10%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++N L G L + + K + GL PD +TY +IN CK GR +L
Sbjct: 278 VVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLD 337
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ + PN V +++LI G + EA + ++ G +PN TY+ LI GL + G
Sbjct: 338 EMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLG 397
Query: 137 HTIVALNLFEEMA-------SGNGEFGVEGFVDK--AKELFL---QMKDENINPDVVTYT 184
A + ++M + +EG + + +E FL +M+ I+P+V TY+
Sbjct: 398 RMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYS 457
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG--------------- 229
+I G C + A LL +M+ G++PN + ++ C+ G
Sbjct: 458 IIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRE 517
Query: 230 --------------------KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
KMDEA D M++ G +PN F Y L+ G+ + G + +A
Sbjct: 518 NLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKA 577
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
++L M + G F Y+ ++ GY K+ +E S ML KG+ PD +Y +
Sbjct: 578 EQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHN 637
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
L ++ A + ++++G+ D+ Y + I G CK + + +AV L + E
Sbjct: 638 LSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPG 697
Query: 390 IRAYNCLIDG 399
I YN LIDG
Sbjct: 698 ISCYNALIDG 707
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 188/415 (45%), Gaps = 40/415 (9%)
Query: 3 IFDYMLNMRPSPPPVCS--FNILFGCLAKNKH--YDTVLSLFKR-------------LNS 45
+ D M+ P+PP V S L G + D ++ +K+ +
Sbjct: 142 LLDQMIRAYPTPPLVLSSVHRALSGSDQGRRPVVLDVLVDTYKKTGRVRDGAEVVLLMKD 201
Query: 46 TGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME 105
GL P L N L+ + + + V G + + +P+ T+++LI+ C +
Sbjct: 202 LGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLES 261
Query: 106 AAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAK 165
A + ++R GC NV TYNTLI GL R G EE FG +
Sbjct: 262 AKKVVEEMRETGCSLNVVTYNTLIGGLCRAG-------AIEE------AFGYKK------ 302
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
+M+D + PD TY ++I G C ++AKCLL EM G+ PNVV ++ ++D
Sbjct: 303 ----EMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGF 358
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
+ G DEA +++ M GV+PN Y+ L+ G C GR+ RA + M +G
Sbjct: 359 MRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADT 418
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
+Y+++I G+ + E A L EM GI P+V Y+ + L +I + ERA L ++
Sbjct: 419 MTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQ 478
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
M DG+ + + Y I G C+ A E + + D+ YN LI GL
Sbjct: 479 MIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGL 533
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 189/393 (48%), Gaps = 13/393 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N++ + + + L + G+ P++YTY+I+IN C++G +L ++
Sbjct: 420 TYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQM 479
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ PNA + LI G C E A K+ P+++ YN+LI GL G
Sbjct: 480 IADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKM 539
Query: 139 IVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
A+ ++EM + + + G ++KA++L QM + +NP+ Y +
Sbjct: 540 DEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQI 599
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
+ G+ +++ + L M+++G+ P+ + +++ L +G M A +L ++ + G+
Sbjct: 600 LEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGL 659
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P++ +Y +L+ GFC + +A L M G + Y+ LI+G+CK+ +I A +
Sbjct: 660 VPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARN 719
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
++ ++ KG+ P+ V Y TL + + A L++EM +GVA D + Y G C
Sbjct: 720 IFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAG-C 778
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
NS ++ I + I ++N L+ G
Sbjct: 779 SNSGDLQQALFITEEMIARGYAIISSFNTLVHG 811
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 142/333 (42%), Gaps = 40/333 (12%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+ I+ L+ + H +S+ + GL PD Y LI+ FCK + +L +
Sbjct: 631 YGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMA 690
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+ P + +LI G C I A +F + G PN TY TLI+G + G
Sbjct: 691 KKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIR 750
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
A++L+ EM + E + PD Y+ + G + D +A
Sbjct: 751 DAIDLYNEMLT-----------------------EGVAPDAFVYSVLAAGCSNSGDLQQA 787
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
+ EM+ +G + +FN ++ CK GK+ E + L +M+ + P+ ++ G
Sbjct: 788 LFITEEMIARGYA-IISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIG 846
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
G+++ A +FV ++ +H ++ + SL+ +M+++G+ P
Sbjct: 847 LGEAGKLSEAHTIFVELQQKNASH---------------RDTDHLSSLFTDMINQGLVPL 891
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
VI+N + + + +++A L D + G A
Sbjct: 892 DVIHNMIQSHCKQGY-LDKALMLHDALVAKGRA 923
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 111/262 (42%), Gaps = 32/262 (12%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + L K + + L + G+ P + YN LI+ FCK +SH +
Sbjct: 661 PDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNI 720
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
I+ PN VT+T+LI G C I +A L+ ++ G P+ F Y+ L G
Sbjct: 721 FNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSN 780
Query: 135 TGHTIVALNLFEEM-ASGNGEFG-----VEGFVDKAK-----ELFLQMKDENINPDVVTY 183
+G AL + EEM A G V GF + K + M D++I P ++T
Sbjct: 781 SGDLQQALFITEEMIARGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTV 840
Query: 184 TSVIRGFCYANDWNEAKCLLIE--------------------MMDQGVQPNVVTFNVIMD 223
+++ G A +EA + +E M++QG+ P V N+I
Sbjct: 841 ENIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLDVIHNMIQS 900
Query: 224 ELCKNGKMDEASRLLDLMIQIG 245
CK G +D+A L D ++ G
Sbjct: 901 H-CKQGYLDKALMLHDALVAKG 921
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 198/409 (48%), Gaps = 13/409 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLF-KRLNSTGLFPDLYTYNILINC 61
+FD M R +P C +NIL K K + + L+ K L + ++P++ T+NI+I+
Sbjct: 206 LFDEMSERRVAPDVTC-YNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISG 264
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
K GRV + R+ ++ + T++SLI GLC E + +A ++F +L +
Sbjct: 265 LSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFID 324
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE-----------GFVDKAKELFLQ 170
V TYNT++ G R G +L L+ M N V G +D+A ++
Sbjct: 325 VVTYNTMLGGFCRCGKIKESLELWRIMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRL 384
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + D TY I G C N+A ++ E+ +G +V + I+D LCK +
Sbjct: 385 MPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRR 444
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
++EAS L+ M + GV N+ V N L+ G R++ A L M GC TV SY+I
Sbjct: 445 LEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNI 504
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI G C+ + A + EML G+KPD+ Y+ L L ++E A +L+ + + G
Sbjct: 505 LICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSG 564
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ D + I GLC + +A+ + + C ++ YN L++G
Sbjct: 565 LEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEG 613
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/481 (25%), Positives = 203/481 (42%), Gaps = 84/481 (17%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M + P + S+N L + K + V SLF + G+ P+L TYN+LI
Sbjct: 100 VFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMS 159
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK L + + F P+ +++++I L ++ +A LF ++ P+V
Sbjct: 160 CKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDV 219
Query: 123 FTYNTLINGLYRTGHTIVALNLFEE----------------MASGNGEFGV--------- 157
YN LI+G + +A+ L+++ M SG + G
Sbjct: 220 TCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWD 279
Query: 158 -----------------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
EG VDKA+ +F ++ + DVVTY +++ GFC
Sbjct: 280 RMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCG 339
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
E+ L +M+Q N+V++N+++ L +NGK+DEA+ + LM G + Y
Sbjct: 340 KIKES-LELWRIMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYG 398
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+ G C+ G VN+A + +ES G V++Y+ +I+ CK + +E A +L EM
Sbjct: 399 IFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKH 458
Query: 315 GIK-----------------------------------PDVVIYNTLFVVLFEIHQVERA 339
G++ P VV YN L L E + A
Sbjct: 459 GVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEA 518
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
EM +G+ D TY + GLC++ I A+EL+ E D+ +N LI G
Sbjct: 519 SAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHG 578
Query: 400 L 400
L
Sbjct: 579 L 579
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 181/391 (46%), Gaps = 48/391 (12%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+++ L L + D S+F L F D+ TYN ++ FC+ G++ + L RI
Sbjct: 292 TYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKES-LELWRI 350
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ + N V++ LIKGL +I EA ++ + G + TY I+GL G+
Sbjct: 351 MEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYV 410
Query: 139 IVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENIN--------- 177
AL + +E+ S G V + +++A L +M +
Sbjct: 411 NKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNAL 470
Query: 178 --------------------------PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
P VV+Y +I G C A + EA + EM++ G+
Sbjct: 471 IGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGL 530
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
+P++ T+++++ LC++ K++ A L +Q G+ P+ ++N L+ G C G+++ A
Sbjct: 531 KPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMT 590
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
+ +ME CT + +Y+ L+ GY K ++ A ++G M G++PD++ YNT+ L
Sbjct: 591 VMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLC 650
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
H+V A + FD+ + G+ +T+ +
Sbjct: 651 LCHRVSYAIEFFDDARNHGIFPTVYTWNILV 681
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 131/247 (53%), Gaps = 2/247 (0%)
Query: 155 FGVEGFVDKAKELFLQMKDE-NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
+G D+A ++F +M++ P + +Y +++ F A W + + L GV P
Sbjct: 88 YGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAP 147
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
N+ T+NV++ CK + ++A L+ M + G +P+ F Y+T+++ TG+++ A ELF
Sbjct: 148 NLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELF 207
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS-KGIKPDVVIYNTLFVVLFE 332
M V Y+ILI+G+ K K+ + A+ L+ ++L + P+V +N + L +
Sbjct: 208 DEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSK 267
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
+V+ K++D M+++ D +TY + I GLC + +A +F L K +D+
Sbjct: 268 CGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVT 327
Query: 393 YNCLIDG 399
YN ++ G
Sbjct: 328 YNTMLGG 334
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 137/293 (46%), Gaps = 12/293 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ I L N + + L + + + S G D+Y Y +I+C CK R+ ++ +
Sbjct: 396 TYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEM 455
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ N+ +LI GL +SR+ +A+ L + GC P V +YN LI GL G
Sbjct: 456 SKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKF 515
Query: 139 IVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSV 186
A +EM + ++ + ++ A EL+ Q + PDV+ + +
Sbjct: 516 GEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNIL 575
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G C ++A ++ M + N+VT+N +M+ K + A+ + M ++G+
Sbjct: 576 IHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGL 635
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
+P+ YNT++ G CL RV+ A E F + G TV++++IL+ K
Sbjct: 636 QPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAVVNRK 688
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +++IL G L +++ + L L+ + +GL PD+ +NILI+ C +G++ V
Sbjct: 532 PDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTV 591
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + T N VT+ +L++G A ++ + G +P++ +YNT++ GL
Sbjct: 592 MANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCL 651
Query: 135 TGHTIVALNLFEEMASGNGEF 155
A+ F++ A +G F
Sbjct: 652 CHRVSYAIEFFDD-ARNHGIF 671
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 185/386 (47%), Gaps = 28/386 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +F L + +D L + ++ S+ DL + LIN K R+ +
Sbjct: 275 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 334
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L I + PN +T+TS+I G C ++ A + + GC+PN +TYN+L+ GL +
Sbjct: 335 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 394
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ + KA L +M+ + I P+V+TYT++++G C +
Sbjct: 395 -----------------------DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEH 431
Query: 195 DWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
D++ A L EMM+Q G++P+ + V+ D LCK G+ +EA +++ GV Y
Sbjct: 432 DFDNA-FRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYY 487
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
TL+DGF G + A L M GCT ++YS+L++ CK K + AL + +M
Sbjct: 488 TTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSL 547
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+GIK + Y L + + + A ++++EM G TY FI+ CK + +
Sbjct: 548 RGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLED 607
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
A +L + D+ YN LIDG
Sbjct: 608 AEDLILKMEREGVAPDVVTYNILIDG 633
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 192/390 (49%), Gaps = 25/390 (6%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R + P C +N LA+ + + ++ +L GL PD TYN +I +CK G ++
Sbjct: 28 RLALSPKC-YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTT 86
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+L P T +L+ G C + +A LF + + GC+ N ++Y LI
Sbjct: 87 AHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQ 146
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
GL V KA LFL MK + +P+V +T +I G
Sbjct: 147 GLCDA-----------------------KCVRKALVLFLMMKRDGCSPNVRAFTFLISGL 183
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C + +A+ L M GV P+V+T+N ++ K G+M++A ++ +LM + G P+
Sbjct: 184 CKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDD 243
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
+ YNTL+ G C + A+EL + G T TV +++ LINGYC ++ + AL + +
Sbjct: 244 WTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNK 302
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M+S K D+ ++ L L + +++ A +L +E+ +G+ + TY + IDG CK+
Sbjct: 303 MMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGK 362
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ A+E+ + + C+ + YN L+ GL
Sbjct: 363 VDIALEVLKMMERDGCQPNAWTYNSLMYGL 392
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 170/334 (50%), Gaps = 13/334 (3%)
Query: 53 YTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 112
Y+Y ILI C V V+ + R +PN FT LI GLC R+ +A LF
Sbjct: 139 YSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDA 198
Query: 113 LRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG--------EFGVEGFVDK- 163
+ G P+V TYN +I G + G AL + +E+ NG + G D+
Sbjct: 199 MPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI-KELMEKNGCHPDDWTYNTLIYGLCDQK 257
Query: 164 ---AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
A+EL E P VVT+T++I G+C A +++A + +MM + ++ F
Sbjct: 258 TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGK 317
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ L K ++ EA LL+ + G+ PN Y +++DG+C +G+V+ A E+ ME G
Sbjct: 318 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 377
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
C ++Y+ L+ G K+K++ A++L +M GI P+V+ Y TL + H + AF
Sbjct: 378 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 437
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
+LF+ M+++G+ D Y D LCK EA
Sbjct: 438 RLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA 471
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 184/382 (48%), Gaps = 14/382 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F L L K L +++ GL P++ TY +I+ +CK G+V VL +
Sbjct: 315 FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMME 374
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
R PNA T+ SL+ GL + ++ +A AL TK++ G PNV TY TL+ G
Sbjct: 375 RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFD 434
Query: 140 VALNLFEEMASGNG----EFGVEGFVD------KAKELFLQMKDENINPDVVTYTSVIRG 189
A LFE M NG E D +A+E + + + + V YT++I G
Sbjct: 435 NAFRLFE-MMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDG 493
Query: 190 FCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
F A + + A L+ M+D+G P+ T++V++ LCK +++EA +LD M G++
Sbjct: 494 FSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 553
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
F Y L+D G+ + AK ++ M S G + +Y++ IN YCK +E A L
Sbjct: 554 IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLIL 613
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK-N 368
+M +G+ PDVV YN L + ++RAF M + WTY + L K N
Sbjct: 614 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGN 673
Query: 369 SYIVEAVELFRTLRILKCELDI 390
V +V+ ++ ELDI
Sbjct: 674 LAYVRSVDTSGMWNLI--ELDI 693
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 169/415 (40%), Gaps = 33/415 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L +D LF+ + GL PD + Y +L + CK GR +
Sbjct: 415 PNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF 474
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
I+R V +T+LI G AA L ++ GC P+ +TY+ L++ L +
Sbjct: 475 ---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCK 531
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
AL + ++M+ E EG D AK ++ +M P T
Sbjct: 532 QKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATT 591
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT I +C +A+ L+++M +GV P+VVT+N+++D G +D A L M+
Sbjct: 592 YTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV 651
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAK-----------------ELFVSMESMGCTHTV 285
PN + Y L+ L G + + +L M G TV
Sbjct: 652 GASCEPNYWTYCLLLKHL-LKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTV 710
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
+YS LI G+CK +E A L M KG+ P+ IY L + E+A
Sbjct: 711 TTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSI 770
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
M G +YR + GLC + LF L L D A+ L DGL
Sbjct: 771 MSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGL 825
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 133/311 (42%), Gaps = 28/311 (9%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++++L L K K + L + +++ G+ ++ Y ILI+ + G+ H +
Sbjct: 517 PDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRM 576
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ S P+A T+T I C E R+ +A L K+ G P+V TYN LI+G
Sbjct: 577 YNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGH 636
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF----------------------------VDKAKE 166
G+ A + + M + E + +D +
Sbjct: 637 MGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQ 696
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
L +M +NP V TY+S+I GFC A EA LL M +G+ PN + +++ C
Sbjct: 697 LLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCC 756
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
++A + +M + G +P Y L+ G C G + K LF + +G H
Sbjct: 757 DTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEV 816
Query: 287 SYSILINGYCK 297
++ IL +G K
Sbjct: 817 AWKILNDGLLK 827
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 189/385 (49%), Gaps = 24/385 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FN L L ++ ++D +F L S + + Y++ I+I C+ G F +
Sbjct: 122 PLSNTFNNLLCLLIRSNYFDKAWWIFNVLKSKVVL-NAYSFGIMITGCCEAGYFVRVFRL 180
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + +PN V +T+LI G C +M A LF K+ G PN TY+ L+NG ++
Sbjct: 181 LAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFK 240
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G EGF +++ M I P+ Y +I +C
Sbjct: 241 QG------------------LQREGF-----QMYENMNRSGIVPNAYAYNCLISEYCNDG 277
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
++A + EM ++G+ V+T+N+++ LC+ K EA +L+ + ++G+ PN YN
Sbjct: 278 MVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYN 337
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L++GFC G+++ A LF ++S G + T+ +Y+ LI GY K + + GAL L EM +
Sbjct: 338 ILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEER 397
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
I V Y L ++ ++A ++ M++ G+ D +TY I G C N + EA
Sbjct: 398 CIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEA 457
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+ F++L + + + YN +I G
Sbjct: 458 SKPFKSLGEMHLQPNSVIYNTMIHG 482
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 158/329 (48%), Gaps = 16/329 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++++L K +++ +N +G+ P+ Y YN LI+ +C G V F V
Sbjct: 226 PNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKV 285
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ +T+ LI GLC + EA L K+ G PN+ TYN LING
Sbjct: 286 FAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCD 345
Query: 135 TGHTIVALNLFEEMASGN-------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
G A+ LF ++ S G VE A +L +M++ I V
Sbjct: 346 VGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAG-ALDLVKEMEERCIARSKV 404
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
TYT +I F N + + C + +M++ G+ P+V T++V++ C NG M EAS+
Sbjct: 405 TYTILIDAFARLN-YTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKS 463
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+ ++ ++PN+ +YNT++ G+C G RA L M G V S+ + C++++
Sbjct: 464 LGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEK 523
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
+ A L G+M++ G+KP V +Y + V
Sbjct: 524 WKEAELLLGQMINSGLKPSVSLYKMVHKV 552
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 170/359 (47%), Gaps = 13/359 (3%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
SP V ++ GC KN +LF +++ GL P+ +TY++L+N F K G GF
Sbjct: 190 SPNVVIYTTLIDGC-CKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGF 248
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+ + RS PNA + LI C + + +A +F ++R G V TYN LI GL
Sbjct: 249 QMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGL 308
Query: 133 YRTG---------HTIVALNLFEEMASGN---GEFGVEGFVDKAKELFLQMKDENINPDV 180
R H + + L + + N F G +D A LF Q+K ++P +
Sbjct: 309 CRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTL 368
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY ++I G+ + A L+ EM ++ + + VT+ +++D + D+A + L
Sbjct: 369 VTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSL 428
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M + G+ P+ + Y+ L+ G C+ G + A + F S+ M Y+ +I+GYCK
Sbjct: 429 MEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGS 488
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
AL L EM+ G+ P+V + + +L + + A L +M G+ Y+
Sbjct: 489 SYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVSLYK 547
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 132/287 (45%), Gaps = 26/287 (9%)
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV-------- 181
GL+ T H+I + L ++SG + +A+ L L++ I ++
Sbjct: 32 QGLHHTSHSI-SFILNHLLSSG--------MLPQAQSLILRLISGRIPSSLMLQLTQAHF 82
Query: 182 ----TYT----SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
TYT +++ + +++ ++A L M+ +G P TFN ++ L ++ D+
Sbjct: 83 TSCSTYTPLYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDK 142
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A + +++ + V NA+ + ++ G C G R L +E G + V Y+ LI+
Sbjct: 143 AWWIFNVL-KSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLID 201
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
G CKN ++ A +L+ +M G+ P+ Y+ L F+ F++++ M R G+
Sbjct: 202 GCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVP 261
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + Y I C + + +A ++F +R + YN LI GL
Sbjct: 262 NAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGL 308
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 190/414 (45%), Gaps = 19/414 (4%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F + +R P +FNI+ L L L +++ S P+ TYN +I
Sbjct: 101 FVLFADIFRLR-LPLSTTTFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIA 155
Query: 61 CFCKMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-C 118
FC GRV G ++ + R P+ T+ ++I G C ++ +A +F ++ G
Sbjct: 156 GFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKV 215
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKE 166
EPN YN LI G G+ VAL EM V EG +A
Sbjct: 216 EPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHA 275
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
L +M ++ + PD TY +I G+C +A + M+ +G++ VVT+ ++ L
Sbjct: 276 LVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALS 335
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
G + E RL + ++ G+RP+ F+YN L++ C G ++RA E+ ME T
Sbjct: 336 MKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDV 395
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+Y+ L+ G C ++ A L EM +GI+PD+V YNTL ++ A K+ DEM
Sbjct: 396 TYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEM 455
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G TY I GLC N +A +L + + D Y LI+GL
Sbjct: 456 MGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGL 509
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 138/288 (47%), Gaps = 31/288 (10%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF---- 72
V ++N+ L +L + + GL PD +TYNILIN +CK G+
Sbjct: 254 VATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFE 313
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
V++G+ +R+ VT+TSLI L + + E LF G P++F YN LIN
Sbjct: 314 VMVGKGIRATV----VTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINS- 368
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ TG G +D+A E+ +M+ + I PD VTY +++RG C
Sbjct: 369 HCTG----------------------GDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCL 406
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
+EA+ L+ EM +G+QP++V++N ++ G + +A ++ D M+ G P
Sbjct: 407 LGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLT 466
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
YN ++ G CL G+ A++L M G T +Y LI G E
Sbjct: 467 YNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTEDE 514
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 40/93 (43%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S+N L + + + + G P L TYN +I C G+ +
Sbjct: 427 PDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDL 486
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA 107
+ ++ + TP+ T+ SLI+GL E + A
Sbjct: 487 VKEMVGNGITPDDSTYISLIEGLTTEDERLAAG 519
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 199/397 (50%), Gaps = 12/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + N++ + K+K + V SLF+ ++ G+ P++ T+NILIN C G + +
Sbjct: 947 PSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNL 1006
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL-- 132
L ++ + F P VT+ +L+ C + R A L + G E +V TYN I+ L
Sbjct: 1007 LKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCT 1066
Query: 133 -YRTGHTIVAL-NLFEEMASGN--------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+R+ + L + +EM S N F EG + A ++F +M +++P+ VT
Sbjct: 1067 NHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVT 1126
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G C+ D+ EA LL M G++ N VT+ +++ LCK+ K + A RLL+ M
Sbjct: 1127 YNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMR 1186
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ Y L+DG C G ++ A +L +M G V +YS LING+C+ I+
Sbjct: 1187 VNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIK 1246
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A + M G+ + +IY+TL + V A K++ M +G AD +T +
Sbjct: 1247 SAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLV 1306
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
LC++ + EA + + + + Y+C+I+G
Sbjct: 1307 SSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIING 1343
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 126/446 (28%), Positives = 195/446 (43%), Gaps = 49/446 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ DYM+ + VC++N+ L N L K++ + P+ TYN LIN F
Sbjct: 1041 LIDYMI-CKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGF 1099
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K G++ V + + +PN VT+ +LI G C EA L + G N
Sbjct: 1100 VKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNE 1159
Query: 123 FTYNTLINGLYRTGHTIVALNLFE-----EMASGNGEFGV-------EGFVDKAKELFLQ 170
TY TL+NGL + +A L E +M G+ + V G +D+A +L
Sbjct: 1160 VTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGN 1219
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF------------ 218
M + +NPDV+TY+S+I GFC + AK ++ M G+ N + +
Sbjct: 1220 MYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGN 1279
Query: 219 -----------------------NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
NV++ LC++GK+ EA + L M +IG+ PN+ Y+
Sbjct: 1280 VTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDC 1339
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
+++G+ G A F M G + F+Y L+ G CK + A +
Sbjct: 1340 IINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIP 1399
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
D V+YNTL + + A LFD+M ++ V D++TY + + GLC+ V AV
Sbjct: 1400 GAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAV 1459
Query: 376 ELFRTLRILKCELDIRA-YNCLIDGL 400
LF T Y CL+DGL
Sbjct: 1460 CLFGTAMGRGTLFPNHVMYTCLVDGL 1485
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 178/389 (45%), Gaps = 39/389 (10%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGL--------FPDLY--------TYNILINCFCKMGRVSH 70
L K + YD+ S+ + L G+ D Y +++LI + K G + +
Sbjct: 873 LVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDY 932
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ F P+ T ++ + + R +LF ++ G PNV T+N LIN
Sbjct: 933 AVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILIN 992
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
GL VEG + KA L QM++ P +VTY +++ +
Sbjct: 993 GLC-----------------------VEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWY 1029
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C + A L+ M+ +G++ +V T+NV +D LC N + +A LL M + + PN
Sbjct: 1030 CKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNE 1089
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
YNTL++GF G++ A ++F M + +Y+ LI G+C + E AL L
Sbjct: 1090 VTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDH 1149
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M + G++ + V Y TL L + + E A +L + M+ + + Y IDGLCKN
Sbjct: 1150 MEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGM 1209
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ EAV+L + D+ Y+ LI+G
Sbjct: 1210 LDEAVQLVGNMYKDGVNPDVITYSSLING 1238
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 177/378 (46%), Gaps = 13/378 (3%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 95
+ ++ +N G D +T N+L++ C+ G++ L + R PN++T+ +I
Sbjct: 1283 AMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIIN 1342
Query: 96 GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG-- 153
G + + A + F + G P+ FTY +L+ GL + G+ + A + G
Sbjct: 1343 GYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAV 1402
Query: 154 ----------EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
E G + +A LF +M N+ PD TY+S++ G C A CL
Sbjct: 1403 DSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLF 1462
Query: 204 IEMMDQGVQ-PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
M +G PN V + ++D L K G A + M++ G P+ +N ++D
Sbjct: 1463 GTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSR 1522
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G++ +A + F +M G + +Y+IL++G+ K + + LSLY M+ +GI PD +
Sbjct: 1523 RGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLT 1582
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
+++L + L + + KL +M +G AD +T+ I+ ++ + +A +L +
Sbjct: 1583 FHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMN 1642
Query: 383 ILKCELDIRAYNCLIDGL 400
L D YN + +GL
Sbjct: 1643 TLGVFPDRDTYNHIFNGL 1660
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 189/448 (42%), Gaps = 49/448 (10%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F FD M+ P ++L G L K + RL+ D YN L+
Sbjct: 1354 FSFFDDMIKCGQHPSFFTYGSLLKG-LCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLA 1412
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF-TKLRVFGCE 119
CK G + + +++++ P++ T++SL+ GLC + + + A LF T +
Sbjct: 1413 ETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLF 1472
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKEL 167
PN Y L++GL + GH A FEEM G + KA +
Sbjct: 1473 PNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDF 1532
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
F M+ + P++ TY ++ GF L MM +G+ P+ +TF+ ++ L K
Sbjct: 1533 FSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSK 1592
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
+G D +LL MI G + F +N L++ + +G++ +A +L M ++G +
Sbjct: 1593 SGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDT 1652
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y+ + NG K + + EML G+ P Y TL + + ++ AFKL DEM+
Sbjct: 1653 YNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEME 1712
Query: 348 RDGVAADT-----------------------------------WTYRTFIDGLCKNSYIV 372
G + T+ T + C+++ I
Sbjct: 1713 ALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIA 1772
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
EA++L + + +LD+ AYN LI G+
Sbjct: 1773 EALKLKGVMELCGLKLDVVAYNVLIMGM 1800
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 180/443 (40%), Gaps = 52/443 (11%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
L+ P +N L K+ + ++LF ++ + PD YTY+ L+ C+ G+
Sbjct: 1395 LHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGK 1454
Query: 68 VSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ G + R PN V +T L+ GL A F ++ G P+ +N
Sbjct: 1455 AVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFN 1514
Query: 127 TLINGLYRTGHTIVALNLFEEM---------ASGNGEFGVEGFVDKAK-----ELFLQMK 172
+I+ R G + A + F M A+ N + GF K L+ M
Sbjct: 1515 AIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYN--ILLHGFSKKQALLRYLSLYSTMM 1572
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 232
E I PD +T+ S+I G + + LL +M+ +G + TFN+++++ ++GKM
Sbjct: 1573 REGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMR 1632
Query: 233 EASRLLDLMIQIGVRPNAFVYN-----------------------------------TLM 257
+A L++ M +GV P+ YN TL+
Sbjct: 1633 KAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLI 1692
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
+G C G + A +L ME++G + S ++ G + E A+ + ML +
Sbjct: 1693 NGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLL 1752
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
P + + TL ++ A KL M+ G+ D Y I G+C N A EL
Sbjct: 1753 PTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFEL 1812
Query: 378 FRTLRILKCELDIRAYNCLIDGL 400
+ +R +I Y L+D +
Sbjct: 1813 YEEMRHRDLCPNITTYAVLVDAI 1835
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 177/427 (41%), Gaps = 47/427 (11%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+ P ++L G K K V + LFP+ Y L++
Sbjct: 1426 LFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGL 1485
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K G F +++ P+ V F ++I ++M+A F+ +R +G PN+
Sbjct: 1486 SKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNL 1545
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEM--------------------ASGNGEFGVE---- 158
TYN L++G + + L+L+ M SG + GV+
Sbjct: 1546 ATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGK 1605
Query: 159 -----------------------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
G + KA +L M + PD TY + G +
Sbjct: 1606 MIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSA 1665
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
+ E+ +L EM++ GV P + +++ +C+ G + A +L D M +G + +
Sbjct: 1666 FRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESA 1725
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
++ G G+ A + M M T+ +++ L++ +C++ +I AL L G M G
Sbjct: 1726 MVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCG 1785
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+K DVV YN L + + AF+L++EM+ + + TY +D + + +++
Sbjct: 1786 LKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGE 1845
Query: 376 ELFRTLR 382
+L L+
Sbjct: 1846 KLLTDLQ 1852
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 178/379 (46%), Gaps = 15/379 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S N L L + D FK + PDL+T+NI+I+ CK G++ V
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDV 207
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESR---IMEAAALFTKLRVFGCEPNVFTYNTLING 131
I P+ VT+ ++I G C R + AL ++ G PN T+N L+NG
Sbjct: 208 AKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNG 267
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPD 179
+ +T A+ +FEEM V EG V++ +L +MKD + P+
Sbjct: 268 YCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPN 327
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
+ T SV+ GFC +A+ + M + V+PNVVT+ +++D + KM +A + +
Sbjct: 328 LATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKE 387
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M GVRPNA +YN L+ GF G L M G + +Y++LI C
Sbjct: 388 AMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKG 447
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
E+ A+ L EML G++P + YNT+ E ++ A+++ M++ A+ TY
Sbjct: 448 EVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYN 507
Query: 360 TFIDGLCKNSYIVEAVELF 378
FI LC+ + E EL
Sbjct: 508 VFIKCLCRMGKMEETNELL 526
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 181/382 (47%), Gaps = 16/382 (4%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F L R SP + +FNI+ L K + K + + GL P + TYN +I+ +C
Sbjct: 173 FKAALRRRVSPD-LFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYC 231
Query: 64 KMGRVS---HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
K GR H +L ++ + +PN VTF L+ G C +S A +F +++ G
Sbjct: 232 KRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAA 291
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEM---------ASGNG---EFGVEGFVDKAKELF 168
+V TY+ L+ GL G + L +EM A+ N F +G + A+
Sbjct: 292 SVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWI 351
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
M+ +N+ P+VVTYT ++ G+ + +A + M +GV+PN +N ++ +N
Sbjct: 352 DSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRN 411
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G S LLD M GVR + YN L+ C+ G V +A +L M +G +Y
Sbjct: 412 GDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTY 471
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ +INGYC+ I+ A + M + +VV YN L + ++E +L +EM
Sbjct: 472 NTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLE 531
Query: 349 DGVAADTWTYRTFIDGLCKNSY 370
G+ + TY T +G+ + Y
Sbjct: 532 KGLVPNGVTYDTIKEGMMEKGY 553
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 169/350 (48%), Gaps = 20/350 (5%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
P ++ N L++ RV LR +P+ TF +I GLC ++ +A +
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDV 207
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL 169
+R +G P+V TYNT+I+G + G G + L
Sbjct: 208 AKDIRAWGLAPSVVTYNTIIDGYCKRGRA--------------------GRMYHVDALLK 247
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M + I+P+ VT+ ++ G+C ++ A + EM QG+ +VVT++ ++ LC G
Sbjct: 248 EMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEG 307
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K++E +L+D M +G+ PN N++++GFC G + A+ SME V +Y+
Sbjct: 308 KVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYT 367
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
IL++GY + +++ AL++ M KG++P+ IYN L L DEM+
Sbjct: 368 ILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMK 427
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
GV AD TY I LC + +AV+L + ++ E YN +I+G
Sbjct: 428 GVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIING 477
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 98/192 (51%), Gaps = 5/192 (2%)
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
+P+ + N ++ L ++D A R ++ V P+ F +N ++ G C TG++ +A +
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGD 206
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL----SLYGEMLSKGIKPDVVIYNTLF 327
+ + + G +V +Y+ +I+GYCK G + +L EM+ GI P+ V +N L
Sbjct: 207 VAKDIRAWGLAPSVVTYNTIIDGYCKRGR-AGRMYHVDALLKEMVEAGISPNEVTFNVLV 265
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
+ A ++F+EM++ G+AA TY + GLC + E V+L ++ L
Sbjct: 266 NGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLV 325
Query: 388 LDIRAYNCLIDG 399
++ N +++G
Sbjct: 326 PNLATLNSVLNG 337
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ ++N+L G L + L + GL P TYN +IN +C+ G + + +
Sbjct: 433 IVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRT 492
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
R+ + N VT+ IK LC ++ E L ++ G PN TY+T+ G+ G
Sbjct: 493 RMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKG 552
Query: 137 HT 138
+T
Sbjct: 553 YT 554
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 199/397 (50%), Gaps = 12/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + N++ + K+K + V SLF+ ++ G+ P++ T+NILIN C G + +
Sbjct: 196 PSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNL 255
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL-- 132
L ++ + F P VT+ +L+ C + R A L + G E +V TYN I+ L
Sbjct: 256 LKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCT 315
Query: 133 -YRTGHTIVAL-NLFEEMASGN--------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+R+ + L + +EM S N F EG + A ++F +M +++P+ VT
Sbjct: 316 NHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVT 375
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G C+ D+ EA LL M G++ N VT+ +++ LCK+ K + A RLL+ M
Sbjct: 376 YNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMR 435
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ Y L+DG C G ++ A +L +M G V +YS LING+C+ I+
Sbjct: 436 VNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIK 495
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A + M G+ + +IY+TL + V A K++ M +G AD +T +
Sbjct: 496 SAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLV 555
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
LC++ + EA + + + + Y+C+I+G
Sbjct: 556 SSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIING 592
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 126/446 (28%), Positives = 195/446 (43%), Gaps = 49/446 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ DYM+ + VC++N+ L N L K++ + P+ TYN LIN F
Sbjct: 290 LIDYMI-CKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGF 348
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K G++ V + + +PN VT+ +LI G C EA L + G N
Sbjct: 349 VKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNE 408
Query: 123 FTYNTLINGLYRTGHTIVALNLFE-----EMASGNGEFGV-------EGFVDKAKELFLQ 170
TY TL+NGL + +A L E +M G+ + V G +D+A +L
Sbjct: 409 VTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGN 468
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF------------ 218
M + +NPDV+TY+S+I GFC + AK ++ M G+ N + +
Sbjct: 469 MYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGN 528
Query: 219 -----------------------NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
NV++ LC++GK+ EA + L M +IG+ PN+ Y+
Sbjct: 529 VTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDC 588
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
+++G+ G A F M G + F+Y L+ G CK + A +
Sbjct: 589 IINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIP 648
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
D V+YNTL + + A LFD+M ++ V D++TY + + GLC+ V AV
Sbjct: 649 GAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAV 708
Query: 376 ELFRTLRILKCELDIRA-YNCLIDGL 400
LF T Y CL+DGL
Sbjct: 709 CLFGTAMGRGTLFPNHVMYTCLVDGL 734
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 178/389 (45%), Gaps = 39/389 (10%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGL--------FPDLY--------TYNILINCFCKMGRVSH 70
L K + YD+ S+ + L G+ D Y +++LI + K G + +
Sbjct: 122 LVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDY 181
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ F P+ T ++ + + R +LF ++ G PNV T+N LIN
Sbjct: 182 AVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILIN 241
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
GL VEG + KA L QM++ P +VTY +++ +
Sbjct: 242 GLC-----------------------VEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWY 278
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C + A L+ M+ +G++ +V T+NV +D LC N + +A LL M + + PN
Sbjct: 279 CKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNE 338
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
YNTL++GF G++ A ++F M + +Y+ LI G+C + E AL L
Sbjct: 339 VTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDH 398
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M + G++ + V Y TL L + + E A +L + M+ + + Y IDGLCKN
Sbjct: 399 MEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGM 458
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ EAV+L + D+ Y+ LI+G
Sbjct: 459 LDEAVQLVGNMYKDGVNPDVITYSSLING 487
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 177/378 (46%), Gaps = 13/378 (3%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 95
+ ++ +N G D +T N+L++ C+ G++ L + R PN++T+ +I
Sbjct: 532 AMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIIN 591
Query: 96 GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG-- 153
G + + A + F + G P+ FTY +L+ GL + G+ + A + G
Sbjct: 592 GYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAV 651
Query: 154 ----------EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
E G + +A LF +M N+ PD TY+S++ G C A CL
Sbjct: 652 DSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLF 711
Query: 204 IEMMDQGVQ-PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
M +G PN V + ++D L K G A + M++ G P+ +N ++D
Sbjct: 712 GTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSR 771
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G++ +A + F +M G + +Y+IL++G+ K + + LSLY M+ +GI PD +
Sbjct: 772 RGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLT 831
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
+++L + L + + KL +M +G AD +T+ I+ ++ + +A +L +
Sbjct: 832 FHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMN 891
Query: 383 ILKCELDIRAYNCLIDGL 400
L D YN + +GL
Sbjct: 892 TLGVFPDRDTYNHIFNGL 909
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/448 (24%), Positives = 188/448 (41%), Gaps = 49/448 (10%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F FD M+ P ++ L L K + RL+ D YN L+
Sbjct: 603 FSFFDDMIKC-GQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLA 661
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF-TKLRVFGCE 119
CK G + + +++++ P++ T++SL+ GLC + + + A LF T +
Sbjct: 662 ETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLF 721
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKEL 167
PN Y L++GL + GH A FEEM G + KA +
Sbjct: 722 PNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDF 781
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
F M+ + P++ TY ++ GF L MM +G+ P+ +TF+ ++ L K
Sbjct: 782 FSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSK 841
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
+G D +LL MI G + F +N L++ + +G++ +A +L M ++G +
Sbjct: 842 SGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDT 901
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y+ + NG K + + EML G+ P Y TL + + ++ AFKL DEM+
Sbjct: 902 YNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEME 961
Query: 348 RDGVAADT-----------------------------------WTYRTFIDGLCKNSYIV 372
G + T+ T + C+++ I
Sbjct: 962 ALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIA 1021
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
EA++L + + +LD+ AYN LI G+
Sbjct: 1022 EALKLKGVMELCGLKLDVVAYNVLIMGM 1049
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 179/445 (40%), Gaps = 56/445 (12%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
L+ P +N L K+ + ++LF ++ + PD YTY+ L+ C+ G+
Sbjct: 644 LHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGK 703
Query: 68 VSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ G + R PN V +T L+ GL A F ++ G P+ +N
Sbjct: 704 AVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFN 763
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGV-----------EGFVDKAK-----ELFLQ 170
+I+ R G + A + F M +GV GF K L+
Sbjct: 764 AIIDSCSRRGQMMKANDFFSTMR----WWGVCPNLATYNILLHGFSKKQALLRYLSLYST 819
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M E I PD +T+ S+I G + + LL +M+ +G + TFN+++++ ++GK
Sbjct: 820 MMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGK 879
Query: 231 MDEASRLLDLMIQIGVRPNAFVYN-----------------------------------T 255
M +A L++ M +GV P+ YN T
Sbjct: 880 MRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYIT 939
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L++G C G + A +L ME++G + S ++ G + E A+ + ML
Sbjct: 940 LINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMR 999
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ P + + TL ++ A KL M+ G+ D Y I G+C N A
Sbjct: 1000 LLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAF 1059
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
EL+ +R +I Y L+D +
Sbjct: 1060 ELYEEMRHRDLCPNITTYAVLVDAI 1084
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 177/427 (41%), Gaps = 47/427 (11%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+ P ++L G K K V + LFP+ Y L++
Sbjct: 675 LFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGL 734
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K G F +++ P+ V F ++I ++M+A F+ +R +G PN+
Sbjct: 735 SKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNL 794
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEM--------------------ASGNGEFGVE---- 158
TYN L++G + + L+L+ M SG + GV+
Sbjct: 795 ATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGK 854
Query: 159 -----------------------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
G + KA +L M + PD TY + G +
Sbjct: 855 MIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSA 914
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
+ E+ +L EM++ GV P + +++ +C+ G + A +L D M +G + +
Sbjct: 915 FRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESA 974
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
++ G G+ A + M M T+ +++ L++ +C++ +I AL L G M G
Sbjct: 975 MVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCG 1034
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+K DVV YN L + + AF+L++EM+ + + TY +D + + +++
Sbjct: 1035 LKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGE 1094
Query: 376 ELFRTLR 382
+L L+
Sbjct: 1095 KLLTDLQ 1101
>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 576
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 182/395 (46%), Gaps = 9/395 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N + ++ +D + R+ G PD+ TYNILI C G++ V
Sbjct: 144 PDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKV 203
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ ++L P +T+T LI+ I +A L ++ G +P+++TYN ++ G+ +
Sbjct: 204 MDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCK 263
Query: 135 TGHTIVALNLFEEMASGNGEFGV---------EGFVDKAKELFLQMKDENINPDVVTYTS 185
G A + + EG + + L M + P++VTY+
Sbjct: 264 RGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSV 323
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I C EA +L M ++G+ P+ ++ ++ CK GK+D A +D MI G
Sbjct: 324 LISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAG 383
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
P+ YNT+M C GR + A +F +E +GC SY+ + + + AL
Sbjct: 384 WLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRAL 443
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
++ EMLS G+ PD + YN+L L V+ A L +M+R +Y + GL
Sbjct: 444 TMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGL 503
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
CK IV+A+E+ + C+ + Y L++G+
Sbjct: 504 CKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGV 538
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 183/418 (43%), Gaps = 45/418 (10%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
L K Y L +++ G PD+ LI R V+ IL P+
Sbjct: 87 LCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVM-EILEQYGDPD 145
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
+ + ++I G C R A + +++ G P+V TYN LI L G +AL + +
Sbjct: 146 SFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMD 205
Query: 147 EMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC--- 191
++ N V G +D A L +M + PD+ TY ++RG C
Sbjct: 206 QLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRG 265
Query: 192 -----------------------------YANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
W + L+ +M+ +G +PN+VT++V++
Sbjct: 266 LVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLI 325
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
LC++GK EA +L +M + G+ P+A+ Y+ L+ FC G+V+ A M S G
Sbjct: 326 SSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWL 385
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
+ +Y+ ++ CK + AL+++ ++ G P+ YNT+F L+ RA +
Sbjct: 386 PDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRALTM 445
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
EM +GV D TY + I LC++ + EA+ L + + + + +YN ++ GL
Sbjct: 446 ILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGL 503
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 173/367 (47%), Gaps = 26/367 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ IL + D + L + S GL PD+YTYN+++ CK G V F
Sbjct: 214 PTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAFEF 273
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + TP+ + L+KGL E R L + + V GCEPN+ TY+ LI+ L R
Sbjct: 274 VSNL---NTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCR 330
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G GE A ++ MK++ +NPD Y +I FC
Sbjct: 331 DGKA--------------GE---------AVDVLRVMKEKGLNPDAYCYDPLISAFCKEG 367
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ A + +M+ G P++V +N IM LCK G+ DEA + + ++G PNA YN
Sbjct: 368 KVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYN 427
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
T+ +G RA + + M S G +Y+ LI+ C++ ++ A+ L +M
Sbjct: 428 TMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERT 487
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
+P V+ YN + + L + H++ A ++ M +G + TY ++G+ + A
Sbjct: 488 EWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRSYA 547
Query: 375 VELFRTL 381
VEL ++L
Sbjct: 548 VELAKSL 554
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 133/265 (50%), Gaps = 23/265 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++++L L ++ + + + + GL PD Y Y+ LI+ FCK G+V
Sbjct: 316 PNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGF 375
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ ++ + + P+ V + +++ LC + R EA +F KL GC PN +YNT+ L+
Sbjct: 376 VDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWS 435
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+G I AL + EM S NG ++PD +TY S+I C
Sbjct: 436 SGDKIRALTMILEMLS-NG----------------------VDPDRITYNSLISSLCRDG 472
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+EA LL++M QP V+++N+++ LCK ++ +A +L +M+ G +PN Y
Sbjct: 473 MVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYT 532
Query: 255 TLMDGFCLTGRVNRAKELFVSMESM 279
L++G G + A EL S+ SM
Sbjct: 533 LLVEGVGYAGWRSYAVELAKSLVSM 557
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 34/194 (17%)
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVR---------------------------------- 247
++ LCK GK EA L+ M++ G +
Sbjct: 84 LNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYGD 143
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P++F YN ++ GFC + R + A + + M+ G + V +Y+ILI C +++ AL +
Sbjct: 144 PDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKV 203
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
++L P V+ Y L ++ A +L DEM G+ D +TY + G+CK
Sbjct: 204 MDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCK 263
Query: 368 NSYIVEAVELFRTL 381
+ A E L
Sbjct: 264 RGLVDRAFEFVSNL 277
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP S+N +FG L + L++ + S G+ PD TYN LI+ C+ G V
Sbjct: 420 PPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIG 479
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L + R+ + P +++ ++ GLC RI++A + + GC+PN TY L+ G+
Sbjct: 480 LLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVG 539
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDEN 175
G A+ L + + S N +++LF +++ +N
Sbjct: 540 YAGWRSYAVELAKSLVSMNA---------ISQDLFRRLQKQN 572
>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
Length = 394
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 182/361 (50%), Gaps = 14/361 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF M++M+ P + ++ G L K D S F+++ +G PD TY +L++
Sbjct: 36 IFHQMIDMKVKPDAFL-YTVVIGHLCKINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSL 94
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K + G + +L +P VT+ +++ G C RI +A +L +L+ G P+
Sbjct: 95 FKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSG 154
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV-----------EGFVDKAKELFLQM 171
Y+TLI+GL + A LF EMA+G+ + + G +D+AK + ++M
Sbjct: 155 SLYSTLIDGLCKHDRHEEARELF-EMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKM 213
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ PD V+Y +I C N +EAK L+ + M++ P V V++D LCK+ ++
Sbjct: 214 IEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRV 273
Query: 232 DEASRLLDLMIQIGVR-PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+EA +L+ M++ G R P+ Y+ ++DG C R++ A + M GC V +Y+
Sbjct: 274 EEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTA 333
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+I+ +CK ++ A L+ M +G DVV YN L +V+ A + +EM G
Sbjct: 334 IIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRG 393
Query: 351 V 351
+
Sbjct: 394 I 394
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 181/375 (48%), Gaps = 17/375 (4%)
Query: 39 LFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 98
L + + G+ P + T+ LI C++ + + +++ P+A +T +I LC
Sbjct: 1 LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60
Query: 99 AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG------- 151
+++ AA+ F ++ GC P+ TY L++ L++ +FEEM S
Sbjct: 61 KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120
Query: 152 ------NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
NG + G +D+A L ++K +P Y+++I G C + EA+ L E
Sbjct: 121 TYATVVNG-YCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEAR-ELFE 178
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M VQ +V+ + + LCK GK+DEA + MI+ G P+ YN ++ C R
Sbjct: 179 MAAGDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNR 237
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK-PDVVIYN 324
V+ AKEL C V ++L++G CK++ +E A + ML G + P VV Y+
Sbjct: 238 VSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYS 297
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
+ L + +++ A+ + +M+R G D TY ID CK + EA ELF+ +
Sbjct: 298 AVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHER 357
Query: 385 KCELDIRAYNCLIDG 399
C D+ AYN LI G
Sbjct: 358 GCASDVVAYNILIRG 372
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 137/292 (46%), Gaps = 25/292 (8%)
Query: 109 LFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELF 168
L +++ G P + T+ +LI L LN F +KA ++F
Sbjct: 1 LLGEMKAAGITPTIVTFGSLIRKL-------CELN----------------FTNKALQIF 37
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
QM D + PD YT VI C N + A +M+ G P+ VT+ V++ L K
Sbjct: 38 HQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKA 97
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
K ++ ++ + M+ G P Y T+++G+C GR+++A L ++ G + + Y
Sbjct: 98 CKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLY 157
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
S LI+G CK+ E A L+ EM + ++ DV++Y + L + +++ A + +M
Sbjct: 158 STLIDGLCKHDRHEEARELF-EMAAGDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMIE 215
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G A D +Y I LCK++ + EA EL KC + L+DGL
Sbjct: 216 AGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGL 267
>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
Length = 822
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 196/400 (49%), Gaps = 18/400 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++IL L +N +F ++ GL P + TY+ LI+ FCK + GF +
Sbjct: 378 PNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGL 437
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
G +LR P+ V + LI GL + + EA F + G N + +N LI+G +R
Sbjct: 438 YGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFR 497
Query: 135 TGHTIVALNLFEEMA---------------SGNGEFGVEGFVDKAKELFLQMKDENINPD 179
T L ++ M G E +G +D+A LF Q+ + +PD
Sbjct: 498 LKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAE---QGRLDEALALFFQLLKKGFSPD 554
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
+ Y ++I GFC D + M G+ P++ +NV+++ + G ++ LL
Sbjct: 555 HIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLR 614
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
+I+ G+ P+ YNT++ G+C ++A +LF ++ +++ILI+ YCK+
Sbjct: 615 EIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDG 674
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++ A+ ++ ML +G +P+++ Y+ L F+ E AF+L+++M D V+ + +Y
Sbjct: 675 RMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYS 734
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
IDGLCK + EA F+ D+ AY LI G
Sbjct: 735 ILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRG 774
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 207/453 (45%), Gaps = 68/453 (15%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
FD M+ PSP V +F+ L K D SL+ + G+ PDL Y+ILIN
Sbjct: 263 FDMMVRSGPSPNLV-TFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLF 321
Query: 64 KMGRVSHG-------------------------FVVLG----------RILRSCFTPNAV 88
+ G++ G +V +G R+L+ +PN V
Sbjct: 322 RAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVV 381
Query: 89 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM 148
T++ LI GLC R++EA +F ++ G EP+V TY++LI+G ++ E +
Sbjct: 382 TYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKS----------ENL 431
Query: 149 ASGNGEFGV----------------------EGFVDKAKELFLQMKDENINPDVVTYTSV 186
G G +G+ +G +D+A F Q + + + ++
Sbjct: 432 RDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNAL 491
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G + + I M V P+VVT+ V++ L + G++DEA L +++ G
Sbjct: 492 IDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGF 551
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+ +Y TL+DGFC ++F M+S G + Y++LIN + + +E L
Sbjct: 552 SPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLE 611
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L E++ G++PD+V YNT+ + +A KLF+ ++ + T+ ID C
Sbjct: 612 LLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYC 671
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
K+ + +A+ +F ++ E +I Y+CLIDG
Sbjct: 672 KDGRMDDAMLIFSSMLERGPEPNILTYSCLIDG 704
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 188/392 (47%), Gaps = 14/392 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+ +F K + L+ + L GL P + N ++ C ++ ++
Sbjct: 208 YEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMV 267
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
RS +PN VTF++LI C E R+ EA +L+ + G P++ Y+ LINGL+R G
Sbjct: 268 RSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLE 327
Query: 140 VALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
+LF MA G + G + KA E++ +M E I+P+VVTY+ +
Sbjct: 328 EGNSLFS-MALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSIL 386
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G C EA + +++ QG++P+V+T++ ++D CK+ + + L +M++ G
Sbjct: 387 INGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGH 446
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+ V + L++G G ++ A F G T + ++ LI+G + K L
Sbjct: 447 VPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLK 506
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
+Y M + PDVV Y L L E +++ A LF ++ + G + D Y T IDG C
Sbjct: 507 MYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFC 566
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
K +++F+ ++ DI YN LI+
Sbjct: 567 KKRDPATGLQIFKLMQSNGIFPDICIYNVLIN 598
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 179/373 (47%), Gaps = 21/373 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++L L++ D L F + GL + Y +N LI+ ++ R G +
Sbjct: 448 PDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKM 507
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ P+ VT+T L+KGL + R+ EA ALF +L G P+ Y TLI+G +
Sbjct: 508 YILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCK 567
Query: 135 TGHTIVALNLFEEMASGNGEFG-------------VEGFVDKAKELFLQMKDENINPDVV 181
L +F+ M S NG F EG V+ EL ++ + PD+V
Sbjct: 568 KRDPATGLQIFKLMQS-NGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIV 626
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
TY ++I G+C +++A L E++ G QPN +TF +++D CK+G+MD+A +
Sbjct: 627 TYNTMICGYCSLKIFSKA-IKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSS 685
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M++ G PN Y+ L+DG+ T A EL+ M + + SYSILI+G CK
Sbjct: 686 MLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGL 745
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+E A + + + + PDV+ Y L ++ ++ A L+D M +G+ D +
Sbjct: 746 MEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKA 805
Query: 361 -----FIDGLCKN 368
F D KN
Sbjct: 806 LAEYGFQDSQAKN 818
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 23/349 (6%)
Query: 52 LYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 111
L Y + N F K G V G ++ P V ++KGLC ++I A+ F
Sbjct: 205 LGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFD 264
Query: 112 KLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQM 171
+ G PN+ T++TLIN + E +D+A L+ M
Sbjct: 265 MMVRSGPSPNLVTFSTLIN-----------------------VYCKELRLDEAFSLYNLM 301
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
++ I PD+V Y+ +I G A E L + +GV+ +VV F+ IMD + G +
Sbjct: 302 IEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDL 361
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
+A + M++ G+ PN Y+ L++G C GRV A +F + G +V +YS L
Sbjct: 362 GKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSL 421
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I+G+CK++ + LYG ML KG PDVV+ + L L ++ A + F + + G+
Sbjct: 422 IDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGL 481
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + + IDG + + ++++ + + K D+ Y L+ GL
Sbjct: 482 TLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGL 530
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 105/264 (39%), Gaps = 60/264 (22%)
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI- 242
TS +R F +A ++ G+ V +F I L ++ D A+R+ D M+
Sbjct: 70 TSALRFFEWAENF------------LGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMVG 117
Query: 243 ----------------QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
G P+ VY+ L+ +C G V+RA + F M MG + + +
Sbjct: 118 QFGNLEVLGEFHGSFRNYGSNPST-VYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHY 176
Query: 287 S------------------------------YSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ Y + N + K E+E L+ + ++ +G+
Sbjct: 177 AASEMLDLLIDSDRIDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGL 236
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
P +V N + L +Q+ A FD M R G + + T+ T I+ CK + EA
Sbjct: 237 VPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFS 296
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
L+ + D+ Y+ LI+GL
Sbjct: 297 LYNLMIEKGIVPDLVIYSILINGL 320
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF ML P P + +++ L K ++ ++ L++++ + P++ +Y+ILI+
Sbjct: 682 IFSSMLERGPEPN-ILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGL 740
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK G + + + P+ + + LI+G C R+ EA L+ + V G P+
Sbjct: 741 CKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 185/395 (46%), Gaps = 14/395 (3%)
Query: 18 CSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGR 77
CSF + L K + + SL +L G+ P+++ YN LI+ CK R +
Sbjct: 306 CSF--MIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKE 363
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
+ PN VT+ LI LC I +A LF K+R G + V+ YN+LING + G
Sbjct: 364 MAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGS 423
Query: 138 TIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
A L M G + A EL +M + I + T+T+
Sbjct: 424 LDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTA 483
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I GFC +EA L +M+D V PN VTFNV+++ C G + +A +L D M+++G
Sbjct: 484 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG 543
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
++P+ + Y +L+ G CLT V++A E +E+ FS + L+ G +
Sbjct: 544 LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETY 603
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
L+ EM +G+K D+V + + + H E++ LF EM+ GV D Y ID L
Sbjct: 604 HLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDAL 663
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
K +++A+ + + I + + LI+ L
Sbjct: 664 SKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNL 698
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 175/362 (48%), Gaps = 23/362 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+N+L L KN + + + + G+ D TY L+ FC+M + + ++
Sbjct: 236 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI 295
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
R F P+ + +I L + + EA +L KL G PNVF YN LI+ L +
Sbjct: 296 RLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCK----- 350
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
N F D A LF +M + P+ VTY +I C +A
Sbjct: 351 ------------NERF------DDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDA 392
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
CL +M D+G++ V +N +++ CK G +D A LL M++ G+ P A Y+ L+ G
Sbjct: 393 LCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAG 452
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
C G ++ A EL M G ++++ LING+CK+K+++ A L+ +M+ + P+
Sbjct: 453 LCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN 512
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
V +N + + + +AF+L+D+M G+ D +TYR+ I GLC S + +A E
Sbjct: 513 EVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA 572
Query: 380 TL 381
L
Sbjct: 573 DL 574
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 174/356 (48%), Gaps = 13/356 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+F L K+K D LF ++ + + P+ T+N++I +C +G + F + ++
Sbjct: 480 TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQM 539
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ P+ T+ SLI GLC S + +A L N F+ L+ GL+R G
Sbjct: 540 VEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRF 599
Query: 139 IVALNLFEEMASGNGEFGVEGFV----------DKAKE--LFLQMKDENINPDVVTYTSV 186
+L++EMA + + F DK K LF +MK++ + PD + YT +
Sbjct: 600 TETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCM 659
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I + +A +M+ G PN VT V+++ LCK+G + A L M+ V
Sbjct: 660 IDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNV 719
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
PN F YN +D F G + +AK+L +M G ++ S++ILI G CK +I+ A+
Sbjct: 720 LPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAID 778
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
L ++ G PD + Y+T+ L ++ + +AF+L++EM G+ D Y FI
Sbjct: 779 LMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 834
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 189/392 (48%), Gaps = 13/392 (3%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
ILF L K + + LF ++ +G+ D Y Y I +C+ + ++ R+
Sbjct: 168 QILFS-LVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMES 226
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
+AV + L+ GLC R+ EA + + G + TY TL+ G R +
Sbjct: 227 EGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEM 286
Query: 141 ALNLFEEM-------ASGNGEFGVE-----GFVDKAKELFLQMKDENINPDVVTYTSVIR 188
AL + +M + N F ++ V++A L ++ D + P+V Y ++I
Sbjct: 287 ALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALID 346
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
C +++A L EM +G++PN VT+ +++ LCK G +++A L D M G++
Sbjct: 347 KLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKV 406
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
+ YN+L++G+C G ++RA+ L M G T T SYS LI G C+N ++ A+ L+
Sbjct: 407 TVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELH 466
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
EM +GI + + L + +++ A +LFD+M V + T+ I+G C
Sbjct: 467 REMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLV 526
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I +A +L+ + + + D Y LI GL
Sbjct: 527 GNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 185/396 (46%), Gaps = 15/396 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S++ L L +N + + L + + G+ + YT+ LIN FCK ++ +
Sbjct: 441 PTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 500
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ S PN VTF +I+G C I +A L+ ++ G +P+ +TY +LI+GL
Sbjct: 501 FDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCL 560
Query: 135 TG-------------HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
T ++ LN F A G F EG + L+ +M + D+V
Sbjct: 561 TSGVSKANEFVADLENSYAVLNNFSLTALLYGLFR-EGRFTETYHLWDEMAVRGVKLDLV 619
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
++T ++ +D ++ L EM +QGV+P+ + + ++D L K M +A D M
Sbjct: 620 SFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQM 679
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G PN + L++ C +G + A+ L M + F+Y+ ++ + ++
Sbjct: 680 VIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDM 739
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A L+ ML +G +V +N L L + +++ A L ++ G + D +Y T
Sbjct: 740 EKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTI 798
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
I LCK I +A EL+ + + D+ AYN I
Sbjct: 799 IHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 834
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 161/374 (43%), Gaps = 53/374 (14%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFG--CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+FD M++ P V +FN++ CL N L+ ++ GL PD YTY LI+
Sbjct: 500 LFDKMIDSNVIPNEV-TFNVMIEGYCLVGNIR--KAFQLYDQMVEMGLKPDNYTYRSLIS 556
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME--------------- 105
C VS + + S N + T+L+ GL E R E
Sbjct: 557 GLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKL 616
Query: 106 --------------------AAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
+ LF +++ G +P+ Y +I+ L + + I ALN +
Sbjct: 617 DLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCW 676
Query: 146 EEMA----SGN--------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
++M S N G++ A+ L +M N+ P+ TY + F
Sbjct: 677 DQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATE 736
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
D +AK L M+ QG ++V+FN+++ LCK GK+ EA L+ + + G P+ Y
Sbjct: 737 GDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISY 795
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
+T++ C G +N+A EL+ M G V +Y+I I + E + AL +Y M+
Sbjct: 796 STIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIR 855
Query: 314 KGIKPDVVIYNTLF 327
G++P+ Y L
Sbjct: 856 SGVQPNWDTYRALL 869
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 137/315 (43%), Gaps = 22/315 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ SF I+ K + LF+ + G+ PD Y +I+ K +
Sbjct: 618 LVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWD 677
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+++ ++PN VT T LI LC + A L ++ PN FTYN ++ G
Sbjct: 678 QMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEG 737
Query: 137 HTIVALNLFEEMASGNGEFGVE-----------GFVDKAKELFLQMKDENINPDVVTYTS 185
A +L M G+ V G + +A +L ++ + +PD ++Y++
Sbjct: 738 DMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYST 797
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I C D N+A L EM+ +G++P+VV +N+ + +G+ D+A + MI+ G
Sbjct: 798 IIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSG 857
Query: 246 VRPNAFVYNTLMDGFCLTGRVN----RAKELFVSM---ESMGCTHTVFSYSILINGYCKN 298
V+PN Y L+ G L + R + ++ + E M TH I K+
Sbjct: 858 VQPNWDTYRALLSGISLMLHYDFSCFRGTKQYIQISVYELMDSTHNKSHRRIWFVDDHKS 917
Query: 299 KEI----EGALSLYG 309
EI +G L+ +G
Sbjct: 918 GEIILEFDGRLNKWG 932
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 194/409 (47%), Gaps = 13/409 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINC 61
+FD M + R P V +NIL K K + T + L+ RL + ++P++ T+NI+I+
Sbjct: 206 LFDEM-SERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISG 264
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
K GRV + R+ ++ + T++SLI GLC + +A ++F +L +
Sbjct: 265 LSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASID 324
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE-----------GFVDKAKELFLQ 170
V TYNT++ G R G +L L+ M N V G +D+A ++
Sbjct: 325 VVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRL 384
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M + D TY I G C N+A ++ E+ G +V + I+D LCK +
Sbjct: 385 MPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKR 444
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
++EAS L+ M + GV N+ V N L+ G R+ A M GC TV SY+I
Sbjct: 445 LEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNI 504
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI G CK + A + EML G KPD+ Y+ L L +++ A +L+ + + G
Sbjct: 505 LICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSG 564
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ D + I GLC + +A+ + + C ++ YN L++G
Sbjct: 565 LETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEG 613
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 192/411 (46%), Gaps = 14/411 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M + P + S+N L + K + V SLF + G+ P+L TYN+LI
Sbjct: 100 VFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMS 159
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK L + + F P+ +++++I L ++ +A LF ++ G P+V
Sbjct: 160 CKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDV 219
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEF-----------GVE--GFVDKAKELFL 169
YN LI+G + A+ L++ + + + G+ G VD +++
Sbjct: 220 TCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWE 279
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+MK D+ TY+S+I G C A + ++A+ + E+ ++ +VVT+N ++ C+ G
Sbjct: 280 RMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCG 339
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+ E+ L +M N YN L+ G G+++ A ++ M + G +Y
Sbjct: 340 KIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYG 398
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
I I+G C N + AL + E+ S G DV Y ++ L + ++E A L EM +
Sbjct: 399 IFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKH 458
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GV ++ I GL ++S + EA R + C + +YN LI GL
Sbjct: 459 GVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGL 509
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 161/346 (46%), Gaps = 23/346 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ S+NIL L +N D +++ + + G D TY I I+ C G V+ V+
Sbjct: 359 IVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQ 418
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ S + + S+I LC + R+ EA+ L ++ G E N N LI GL R
Sbjct: 419 EVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIR-- 476
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+ G F +M P VV+Y +I G C A +
Sbjct: 477 ---------------DSRLGEASF------FLREMGKNGCRPTVVSYNILICGLCKAGKF 515
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
EA + EM++ G +P++ T+++++ LC++ K+D A L +Q G+ + ++N L
Sbjct: 516 GEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNIL 575
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ G C G+++ A + +ME CT + +Y+ L+ G+ K + A ++G M G+
Sbjct: 576 IHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGL 635
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
+PD++ YNT+ L V A + FD+ + G+ +T+ +
Sbjct: 636 QPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 158/330 (47%), Gaps = 15/330 (4%)
Query: 85 PNAVTFTSLIKGLCAESRIMEAAALF-TKLRVFGCEPNVFTYNTLINGLYRT---GHTIV 140
P +++ ++K L +E A ALF + R G + Y+ ++ L T H
Sbjct: 5 PKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSR 64
Query: 141 ALNLFEEMASGNGE---------FGVEGFVDKAKELFLQMKDE-NINPDVVTYTSVIRGF 190
+ L E +G D+A ++F +M++ P + +Y +++ F
Sbjct: 65 IVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAF 124
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
A W + + L GV PN+ T+NV++ CK + ++A LD M + G +P+
Sbjct: 125 VEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDV 184
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
F Y+T+++ G+++ A ELF M G V Y+ILI+G+ K K+ + A+ L+
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDR 244
Query: 311 MLS-KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
+L + P+V +N + L + +V+ K+++ M+++ D +TY + I GLC
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAG 304
Query: 370 YIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ +A +F L K +D+ YN ++ G
Sbjct: 305 NVDKAESVFNELDERKASIDVVTYNTMLGG 334
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 71/141 (50%), Gaps = 1/141 (0%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +++IL L +++ D L L+ + +GL D+ +NILI+ C +G++ V
Sbjct: 532 PDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTV 591
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + T N VT+ +L++G A ++ + G +P++ +YNT++ GL
Sbjct: 592 MANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCM 651
Query: 135 TGHTIVALNLFEEMASGNGEF 155
A+ F++ A +G F
Sbjct: 652 CRGVSYAMEFFDD-ARNHGIF 671
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
NIL L D +++ + +L TYN L+ F K+G + V+ G + +
Sbjct: 573 NILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYK 632
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
P+ +++ +++KGLC + A F R G P V+T+N L+ +
Sbjct: 633 MGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 182/374 (48%), Gaps = 23/374 (6%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
L K+ ++ ++ ++ GL ++ T N LI+ C+ + VL ++ S +
Sbjct: 432 LCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELD 491
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
+T+ +I+G C S++ EA L + G +P++FT+N + HT L E
Sbjct: 492 RITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFL-------HTYCNLGKVE 544
Query: 147 EMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
E+ L QMK E + PD+VTY ++I G+C A D ++A L E+
Sbjct: 545 EIL----------------HLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTEL 588
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
M G++PN V +N ++ +NG + +A +LD M G++P YN+LM C G V
Sbjct: 589 MKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLV 648
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
K +F V Y+I+I G+CK +I+ A+ + EM S+GI P+ + Y TL
Sbjct: 649 EEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTL 708
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
+ E A KLFDEM G+ D+ +Y T I G C+ + + VE +
Sbjct: 709 MFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVL 768
Query: 387 ELDIRAYNCLIDGL 400
+ D +YN +DG+
Sbjct: 769 KQDGCSYNAFVDGI 782
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 198/480 (41%), Gaps = 83/480 (17%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M + + P V ++ + L + D ++ L +G+ P + TYN+L++
Sbjct: 197 VFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDAL 256
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL------------------------- 97
CK GRV F + GR++ P+ VTF LI GL
Sbjct: 257 CKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNE 316
Query: 98 ----------CAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
C + EA LF ++ G + V TYN + L + G A + +E
Sbjct: 317 VIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDE 376
Query: 148 MA-------------------SGNG-----------------------------EFGVEG 159
M G G E G
Sbjct: 377 MLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSG 436
Query: 160 FVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 219
++A E++ Q+ + + +V T ++I G C N+ EA +L M++ GV+ + +T+N
Sbjct: 437 KHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYN 496
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
+++ CK KMDEA +L D MI+ G +P+ F +N + +C G+V L M+S
Sbjct: 497 IMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSE 556
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G + +Y +I+GYCK K++ A E++ G++P+ VIYN L + A
Sbjct: 557 GLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDA 616
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ D M+ +G+ TY + + +C + E +F + EL + Y +I G
Sbjct: 617 IGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQG 676
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 176/416 (42%), Gaps = 48/416 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +F IL LA+ + + V ++ + + G+ P+ YN +I C+ G S +
Sbjct: 279 PSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKL 338
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ VT+ + K LC E + A + ++ + G + +N+++ R
Sbjct: 339 FDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLR 398
Query: 135 -TGHTIVALNLFEEM------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
TG + L L EM + E G ++A E++ Q+ + + +V
Sbjct: 399 GTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVA 458
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
T ++I G C N+ EA +L M++ GV+ + +T+N+++ CK KMDEA +L D M
Sbjct: 459 TSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDM 518
Query: 242 IQIGVRPNAFVYN-----------------------------------TLMDGFCLTGRV 266
I+ G +P+ F +N T++DG+C +
Sbjct: 519 IKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDM 578
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
++A E + G Y+ LI GY +N I A+ + M GI+P V YN+L
Sbjct: 579 HKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSL 638
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
+ VE +F + + Y I G CK I EAV F+ +
Sbjct: 639 MYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMH 694
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 160/355 (45%), Gaps = 47/355 (13%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
L+ P+P P S L + + H R L P + T +L +
Sbjct: 54 LSSLPAPLPASSAQRLLQHILSDAHASA-----SRHAEDLLSPRVSTL-LLQSLVADRAS 107
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLC---------------AESRIMEAAALFTK 112
+ ++ R+LR F P +V ++ C A + AA F +
Sbjct: 108 LPSARRLVSRLLR--FNPLSVAAAAIADSHCTATADLLVRACLNSPAPGSLSRAADAFLE 165
Query: 113 LRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMK 172
L G P++ T + L+ L G G +D A+++F +M+
Sbjct: 166 LSARGASPSIKTCSILVEAL-----------------------GCGGQLDVARKVFGEMR 202
Query: 173 D-ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
D + + PDV TYT++I+ C A + + A +L E+ G+QP VVT+NV+MD LCK+G++
Sbjct: 203 DGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRV 262
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
+EA RL M++ VRP+ + L+ G + + M+ G T Y+ +
Sbjct: 263 EEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEM 322
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
I +C+ AL L+ EM+SKGIK VV YN + L + ++E A K+ DEM
Sbjct: 323 IGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEM 377
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 191/389 (49%), Gaps = 33/389 (8%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCK-------MGRVS 69
+ S N L CL ++ D V LF+ L G P+++TY I++N FC+ + R S
Sbjct: 171 IMSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRAS 230
Query: 70 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
+LG+I S TPN VT+ + IKGLC A L L N +N +I
Sbjct: 231 E---ILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVI 287
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRG 189
GL + G +D+A E+F +MK+ I PDV +Y+ +I G
Sbjct: 288 YGLCQGG-----------------------ILDEASEVFKEMKNSGILPDVYSYSILIDG 324
Query: 190 FCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
FC ++A + EM + G+ PN+ ++++++D CK G++D+A + + M G+ P+
Sbjct: 325 FCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPD 384
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
+ Y+ L+DGFC G ++ A + + M S + + F+Y LI GY K+K+ AL +
Sbjct: 385 VYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFR 444
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
M G+ PD + N + + +A L ++ Q +GV + ++Y FI +C+ S
Sbjct: 445 IMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGS 504
Query: 370 YIVEAVELFRTLRILKCELDIRAYNCLID 398
+A++L + D+ Y+ LI
Sbjct: 505 VPEKALQLLPVMLKRNVLPDVVNYSTLIS 533
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 183/383 (47%), Gaps = 17/383 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S++IL K D L +F+ + ++G+ PD+Y+Y+ILI+ FC+ G +
Sbjct: 348 PNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKF 407
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + F+P+A + SLIKG + A F ++ G P+ N +++ R
Sbjct: 408 WEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCR 467
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
AL L E+ F + +KA +L M N+ PDVV
Sbjct: 468 KPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVN 527
Query: 183 YTSVIRGFCYANDWNEAKC--LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
Y+++I C+A N K L I+M G+ NV T+ ++++ + KMD A RL
Sbjct: 528 YSTLIS--CFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKG 585
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M + V P+ Y +L+ GFC TG + RA+ LF M GC+ V +Y+ IN Y K +
Sbjct: 586 MKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNK 645
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG-VAADTWTYR 359
A LY +M +G+ PD ++Y L ++ RA LFDEM+++G + Y
Sbjct: 646 NNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYT 705
Query: 360 TFIDGLCKNSYIVEAVELFRTLR 382
I+ K + +A +L+ +R
Sbjct: 706 CLINSYIKLNKRDQAEKLYEEMR 728
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 185/400 (46%), Gaps = 62/400 (15%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FN + L + D +FK + ++G+ PD+Y+Y+ILI+ FC+ GRV V +
Sbjct: 283 FNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMR 342
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
S PN +++ LI G C E R+ +A +F +++ G P+V++Y+ LI+G R G
Sbjct: 343 NSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMD 402
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRG---------- 189
A+ +EEM S N +P Y S+I+G
Sbjct: 403 SAIKFWEEMTSNN-----------------------FSPSAFNYCSLIKGYYKSKQFANA 439
Query: 190 -------------------------FCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
+C D+N+A L + + GV N ++N +
Sbjct: 440 LKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHR 499
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE--LFVSMESMGCT 282
+C+ ++A +LL +M++ V P+ Y+TL+ C R+N K LF+ M +G T
Sbjct: 500 ICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLIS--CFAKRLNSEKAVMLFIKMTKVGIT 557
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
V +Y+ILIN + + +++ A L+ M + PD + Y +L ++ RA L
Sbjct: 558 FNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARAL 617
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
FDEM R+G + + TY FI+ K + +A +L+ ++
Sbjct: 618 FDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMK 657
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 153/321 (47%), Gaps = 16/321 (4%)
Query: 9 NMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV 68
N PS CS L K+K + L F+ + G++PD N +++ +C+
Sbjct: 415 NFSPSAFNYCS---LIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDF 471
Query: 69 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTL 128
+ + + + N ++ I +C S +A L + P+V Y+TL
Sbjct: 472 NKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTL 531
Query: 129 INGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENI 176
I+ + ++ A+ LF +M F V+ + +D A LF MK+ +
Sbjct: 532 ISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRV 591
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
PD + YTS++ GFC + A+ L EM +G PNVVT+ ++E K K ++A +
Sbjct: 592 YPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHK 651
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG-CTHTVFSYSILINGY 295
L + M + GV P+ +Y L+ FC TG +NRA+ LF M+ G CT V Y+ LIN Y
Sbjct: 652 LYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSY 711
Query: 296 CKNKEIEGALSLYGEMLSKGI 316
K + + A LY EM +KG+
Sbjct: 712 IKLNKRDQAEKLYEEMRAKGL 732
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 118/259 (45%), Gaps = 24/259 (9%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++ L C AK + + + LF ++ G+ ++ TY ILIN F ++ + +
Sbjct: 523 PDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRL 582
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ S P+ + +TSL+ G C + A ALF ++ GC PNV TY IN +
Sbjct: 583 FKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLK 642
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
++A +L+ +MK+ + PD + YT +I FC
Sbjct: 643 LNKN-----------------------NQAHKLYEKMKERGVYPDQILYTMLIAAFCNTG 679
Query: 195 DWNEAKCLLIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+ N A+ L EM +G PNVV + +++ K K D+A +L + M G+
Sbjct: 680 EMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLSRLCSSE 739
Query: 254 NTLMDGFCLTGRVNRAKEL 272
++ + +C +V + +L
Sbjct: 740 GSVSESWCCRHQVLKTGKL 758
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 118/265 (44%), Gaps = 39/265 (14%)
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
++ V + +I+ F + A + + D G++ N+++ N ++ L ++ ++D
Sbjct: 131 DVEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGV 190
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCL----TGRVNRAKELFVSMESMGCTHTVFSYSI 290
L +++I+ G RPN Y +M+ FC + + RA E+ + G T V +Y
Sbjct: 191 RLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGT 250
Query: 291 LINGYCK--------------------------NKEIEG---------ALSLYGEMLSKG 315
I G CK N I G A ++ EM + G
Sbjct: 251 YIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSG 310
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
I PDV Y+ L +V++A ++F EM+ G+ + ++Y IDG CK + +A+
Sbjct: 311 ILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKAL 370
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
E+F ++ D+ +Y+ LIDG
Sbjct: 371 EVFEEMKNSGILPDVYSYSILIDGF 395
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 73/172 (42%), Gaps = 6/172 (3%)
Query: 233 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
+A L+ L++ V + V++ L+ F + A +FV + G + S + L+
Sbjct: 121 DAGELVSLLLD--VEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLL 178
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE----IHQVERAFKLFDEMQR 348
++ ++G L+ ++ G +P++ Y + + RA ++ ++
Sbjct: 179 KCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYM 238
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G + TY T+I GLCK A L + L L+ +N +I GL
Sbjct: 239 SGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGL 290
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 190/434 (43%), Gaps = 49/434 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N L + + L + G P +YTYN +IN CK G+ V
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+LRS +P++ T+ SL+ C + ++E +F+ +R P++ ++++++ R
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+G+ AL F + + +G + A L +M + DVVT
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT 447
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++ G C EA L EM ++ + P+ T +++D CK G + A L M
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK 507
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ +R + YNTL+DGF G ++ AKE++ M S T SYSIL+N C +
Sbjct: 508 EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLA 567
Query: 303 GALSLYGEMLSKGIKPDVVI-----------------------------------YNTLF 327
A ++ EM+SK IKP V+I YNTL
Sbjct: 568 EAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI 627
Query: 328 VVLFEIHQVERAFKLFDEMQRD--GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
+ +AF L +M+ + G+ D +TY + + G C+ + + EA + R +
Sbjct: 628 YGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERG 687
Query: 386 CELDIRAYNCLIDG 399
D Y C+I+G
Sbjct: 688 VNPDRSTYTCMING 701
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 178/380 (46%), Gaps = 23/380 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F++L + + F L S G + N LI ++G V + V I
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
RS N T ++ LC + ++ + ++++ G P++ TYNTLI+
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA-------- 279
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
+ +G +++A EL M + +P V TY +VI G C + A
Sbjct: 280 ---------------YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERA 324
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
K + EM+ G+ P+ T+ ++ E CK G + E ++ M V P+ ++++M
Sbjct: 325 KEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSL 384
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
F +G +++A F S++ G Y+ILI GYC+ I A++L EML +G D
Sbjct: 385 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMD 444
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
VV YNT+ L + + A KLF+EM + D++T IDG CK + A+ELF+
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504
Query: 380 TLRILKCELDIRAYNCLIDG 399
++ + LD+ YN L+DG
Sbjct: 505 KMKEKRIRLDVVTYNTLLDG 524
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 175/374 (46%), Gaps = 26/374 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M + P VC F+ + ++ + D L F + GL PD Y ILI +
Sbjct: 362 VFSDMRSRDVVPDLVC-FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ G +S + +L+ + VT+ +++ GLC + EA LF ++ P+
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+T LI+G + G+ + A ELF +MK++ I DVVT
Sbjct: 481 YTLTILIDGHCKLGN-----------------------LQNAMELFQKMKEKRIRLDVVT 517
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++ GF D + AK + +M+ + + P ++++++++ LC G + EA R+ D MI
Sbjct: 518 YNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMI 577
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
++P + N+++ G+C +G + + M S G SY+ LI G+ + + +
Sbjct: 578 SKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMS 637
Query: 303 GALSLYGEMLSK--GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
A L +M + G+ PDV YN++ +Q++ A + +M GV D TY
Sbjct: 638 KAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTC 697
Query: 361 FIDGLCKNSYIVEA 374
I+G + EA
Sbjct: 698 MINGFVSQDNLTEA 711
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 158/364 (43%), Gaps = 40/364 (10%)
Query: 54 TYNILINCFCKMGRVSHGFVVLGRILR--------------SCFT---PNAVTFTSLIKG 96
+ + +I+ + GR+S L R++R S F+ N F LI+
Sbjct: 115 SLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRT 174
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG 156
++ EA FT LR G ++ N LI L R G +A +++E++
Sbjct: 175 YVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSG---- 230
Query: 157 VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
+ +V T ++ C + L ++ ++GV P++V
Sbjct: 231 -------------------VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIV 271
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
T+N ++ G M+EA L++ M G P + YNT+++G C G+ RAKE+F M
Sbjct: 272 TYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEM 331
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
G + +Y L+ CK ++ ++ +M S+ + PD+V ++++ + +
Sbjct: 332 LRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNL 391
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
++A F+ ++ G+ D Y I G C+ I A+ L + C +D+ YN +
Sbjct: 392 DKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTI 451
Query: 397 IDGL 400
+ GL
Sbjct: 452 LHGL 455
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 104/233 (44%), Gaps = 21/233 (9%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++N L K DT ++ + S + P +Y+IL+N C G ++ F V
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWD 574
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ P + S+IKG C + + K+ G P+ +YNTLI G R
Sbjct: 575 EMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREE 634
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
+ A L ++M G G V PDV TY S++ GFC N
Sbjct: 635 NMSKAFGLVKKMEEEQG-----GLV----------------PDVFTYNSILHGFCRQNQM 673
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
EA+ +L +M+++GV P+ T+ +++ + EA R+ D M+Q G P+
Sbjct: 674 KEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
Length = 674
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 191/398 (47%), Gaps = 24/398 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F +N D + L +++ G PD+ Y+ L+N F + GRV +
Sbjct: 252 PNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKL 311
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L PN V + + +KGLC R E L ++ C PN T++TLIN L +
Sbjct: 312 LSTML---CRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQ 368
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
A+ + E+M F + D A +L M PD ++
Sbjct: 369 NRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSML---CKPDTIS 425
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ +V++ C A W +A L+ +M+ + N +TFN+++D LC+NG++ +A + +LM
Sbjct: 426 FNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMP 485
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ P+ Y++L++GF G A +LF SM C +FSY+ + G C +
Sbjct: 486 KYRCTPDIVTYSSLINGFSEQGLDKVAFDLF---RSMPCRADIFSYNATLKGLCMAARWD 542
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L +M++K P+ V +N L L + V RA +++++M + G+ D +TY I
Sbjct: 543 DAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALI 602
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+G + + +A++ T+ CE D +YN ++ GL
Sbjct: 603 NGYSEQGCLDDALKFLSTM---PCEPDTISYNSILKGL 637
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 190/420 (45%), Gaps = 63/420 (15%)
Query: 12 PSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P PP V + NIL L + + + L ++G D ++N L+ +C+ G +
Sbjct: 114 PEPPAVITCNILIKKLCARRRLADAERVLEALKTSGA-ADAVSHNTLVAGYCRDGSLWDA 172
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
VL R+ N VT+T+LI G C R+ +A L + V P+ +TYNT++ G
Sbjct: 173 ERVL-EAARASGAANVVTYTALIDGYCRSGRLTDALRLIASMPV---APDTYTYNTVLKG 228
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
L +EE A+EL +M N +P+ VT+ + IR FC
Sbjct: 229 LCFAKQ-------WEE----------------AEELMREMIRNNCHPNEVTFATQIRAFC 265
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
+ A LL +M G P+VV ++ +++ ++G++D+A +LL M+ RPN
Sbjct: 266 QNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTML---CRPNTV 322
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
YN + G C+ GR + EL M C ++S LIN C+N+ E A+ + +M
Sbjct: 323 CYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQM 382
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM--QRDGVA----------ADTW--- 356
G PDVV YNT+ E + A KL + M + D ++ A+ W
Sbjct: 383 QKYGYMPDVVSYNTIISCFSEQACADDALKLLNSMLCKPDTISFNAVLKCLCRAERWYDA 442
Query: 357 -----------------TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
T+ ID LC+N + +A+E+F + +C DI Y+ LI+G
Sbjct: 443 AELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLING 502
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 164/331 (49%), Gaps = 26/331 (7%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP +F+ L L +N+ + + + +++ G PD+ +YN +I+CF +
Sbjct: 353 PPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALK 412
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L +L P+ ++F +++K LC R +AA L K+ C N T+N LI+ L
Sbjct: 413 LLNSML---CKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLC 469
Query: 134 RTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDV 180
+ G A+ +FE M NG F +G A +LF M D+
Sbjct: 470 QNGQVKDAIEMFELMPKYRCTPDIVTYSSLING-FSEQGLDKVAFDLFRSMP---CRADI 525
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+Y + ++G C A W++A L+ +M+ + PN VTFN++++ LC+ G ++ A + +
Sbjct: 526 FSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQ 585
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M + G+ P+ F YN L++G+ G ++ A + + +M C SY+ ++ G C+ +
Sbjct: 586 MPKYGITPDIFTYNALINGYSEQGCLDDALKF---LSTMPCEPDTISYNSILKGLCRAER 642
Query: 301 IEGALSLYGEMLSKGIKPDVVIY---NTLFV 328
+ A L EML K P+ V + N LF+
Sbjct: 643 WKDAEKLVTEMLRKNCTPNEVTFKYANQLFI 673
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 110/257 (42%), Gaps = 49/257 (19%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
+LN P SFN + CL + + + L ++ + T+NILI+ C+ G
Sbjct: 413 LLNSMLCKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNG 472
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLI-------------------------------- 94
+V + + + TP+ VT++SLI
Sbjct: 473 QVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMPCRADIFSYNATL 532
Query: 95 KGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM------ 148
KGLC +R +A L + C PN T+N LIN L + G A+ ++E+M
Sbjct: 533 KGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGIT 592
Query: 149 -------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
A NG + +G +D A + M E PD ++Y S+++G C A W +A+
Sbjct: 593 PDIFTYNALING-YSEQGCLDDALKFLSTMPCE---PDTISYNSILKGLCRAERWKDAEK 648
Query: 202 LLIEMMDQGVQPNVVTF 218
L+ EM+ + PN VTF
Sbjct: 649 LVTEMLRKNCTPNEVTF 665
>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
Length = 704
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 182/388 (46%), Gaps = 25/388 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+N + + K + L L + +G L T+ ILI+ FCK G++
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + V +TSLI+G C + ALF ++ G P TYNTLI G +
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G + +A E+F M + + P+V TYT +I G C
Sbjct: 295 LGQ-----------------------LKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVG 331
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EA L M+++ +PN VT+N+I+++LCK+G + +A +++LM + RP+ YN
Sbjct: 332 KTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYN 391
Query: 255 TLMDGFCLTGRVNRAKELFVSM--ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
L+ G C G ++ A +L M +S V SY+ LI+G CK + AL +Y ++
Sbjct: 392 ILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLV 451
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
K D V N L + V +A +L+ ++ + ++ TY IDG CK +
Sbjct: 452 EKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLN 511
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
A L +R+ + + + YNCL+ L
Sbjct: 512 VAKGLLCKMRVSELQPSVFDYNCLLSSL 539
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 180/394 (45%), Gaps = 14/394 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ IL K D + K + GL DL Y LI FC G + G + +
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
L +P A+T+ +LI+G C ++ EA+ +F + G PNV+TY LI+GL G T
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333
Query: 139 IVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSV 186
AL M + E +G V A E+ MK PD +TY +
Sbjct: 334 KEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNIL 393
Query: 187 IRGFCYANDWNEAKCLLIEMMDQG--VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+ G C D +EA LL M+ P+V+++N ++ LCK ++ +A + DL+++
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
+ N L++ G VN+A EL+ + +Y+ +I+G+CK + A
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L +M ++P V YN L L + +++A++LF+EMQRD D ++ IDG
Sbjct: 514 KGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDG 573
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
K I A L + D+ Y+ LI+
Sbjct: 574 SLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 195/395 (49%), Gaps = 17/395 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF++M+ R P V ++ L L L + P+ TYNI+IN
Sbjct: 304 IFEFMIE-RGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKL 362
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFG-CEP 120
CK G V+ ++ + + P+ +T+ L+ GLCA+ + EA+ L + L+ +P
Sbjct: 363 CKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDP 422
Query: 121 NVFTYNTLINGLYRTGHTIVALNLF----EEMASGN--------GEFGVEGFVDKAKELF 168
+V +YN LI+GL + AL+++ E++ +G+ G V+KA EL+
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELW 482
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
Q+ D I + TYT++I GFC N AK LL +M +QP+V +N ++ LCK
Sbjct: 483 KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKE 542
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G +D+A RL + M + P+ +N ++DG G + A+ L V M G + +F+Y
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTY 602
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
S LIN + K ++ A+S + +M+ G +PD I +++ + ++ +L ++
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVD 662
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
+ D T +D +C +S ++ + R LR+
Sbjct: 663 KDIVLDKELTCTVMDYMCNSSANMDLAK--RLLRV 695
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 182/382 (47%), Gaps = 29/382 (7%)
Query: 23 LFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSC 82
L L ++++++ S ++++ T F + + + L+ C+ +M + F VL +L+
Sbjct: 78 LMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRG 137
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
F N L+KGLC +A +L ++R P+VF+YNT+I G
Sbjct: 138 FAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCE-------- 189
Query: 143 NLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
G E ++KA EL +MK + +VT+ +I FC A +EA
Sbjct: 190 -------------GKE--LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
L EM G++ ++V + ++ C G++D L D +++ G P A YNTL+ GFC
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G++ A E+F M G V++Y+ LI+G C + + AL M+ K +P+ V
Sbjct: 295 LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVT 354
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
YN + L + V A ++ + M++ D TY + GLC + EA +L +
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM- 413
Query: 383 ILK----CELDIRAYNCLIDGL 400
LK + D+ +YN LI GL
Sbjct: 414 -LKDSSYTDPDVISYNALIHGL 434
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 174/380 (45%), Gaps = 30/380 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD +L R P ++N L K +F+ + G+ P++YTY LI+
Sbjct: 269 LFDEVLE-RGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +G+ L ++ PNAVT+ +I LC + + +A + ++ P+
Sbjct: 328 CGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDEN-INPDVV 181
TYN L+ GL G + +K L+L +KD + +PDV+
Sbjct: 388 ITYNILLGGLCAKGD----------------------LDEASKLLYLMLKDSSYTDPDVI 425
Query: 182 TYTSVIRGFCYANDWNEA---KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
+Y ++I G C N ++A LL+E + G + VT N++++ K G +++A L
Sbjct: 426 SYNALIHGLCKENRLHQALDIYDLLVEKLGAG---DRVTTNILLNSTLKAGDVNKAMELW 482
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
+ + N+ Y ++DGFC TG +N AK L M +VF Y+ L++ CK
Sbjct: 483 KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKE 542
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
++ A L+ EM PDVV +N + + ++ A L M R G++ D +TY
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTY 602
Query: 359 RTFIDGLCKNSYIVEAVELF 378
I+ K Y+ EA+ F
Sbjct: 603 SKLINRFLKLGYLDEAISFF 622
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%)
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
+ F+ S L+ +++ E A S Y +ML + V + L ++ + AF
Sbjct: 69 SSLAFAGSNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFG 128
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ M + G A + + + + GLC+N +AV L R +R D+ +YN +I G
Sbjct: 129 VLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRG 186
>gi|302755288|ref|XP_002961068.1| hypothetical protein SELMODRAFT_75649 [Selaginella moellendorffii]
gi|300172007|gb|EFJ38607.1| hypothetical protein SELMODRAFT_75649 [Selaginella moellendorffii]
Length = 461
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 177/367 (48%), Gaps = 23/367 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +++IL L K + L L +++ S GL D TY+++I+ CK G V V++
Sbjct: 87 VSTYSILVAALTAAKRNNDALELLEQMESVGLEADKDTYSLIIHSLCKSGMVDKAKVLVE 146
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
R++ P+A + +I+ L R+ EA + + C +V TYN+L+ G +
Sbjct: 147 RMISRNCVPDARIYDPVIEELSKTGRVDEAVEIAKEADAKHC-TSVVTYNSLVLGFLKAR 205
Query: 137 HTIVALNLFEEMA---------------SGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
+ +F MA G G+ F A +L +M + + PDVV
Sbjct: 206 RLKRGIKVFTRMARTGPSPDIYTYNILFEGLSRHGLWRF---AYKLLPRMNQDGVLPDVV 262
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
T+ S+I G N ++ A L+ EM+ +G PN +T+ +++ L +N + DE L +
Sbjct: 263 TFNSLINGLVEDNRYHRAVTLIQEMVSRGCDPNAITYTILLKWLARNARTDECVELFQRL 322
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT-HTVFSYSILINGYCKNKE 300
+ + PN + YNT+M C GR+++A LF M + CT +Y LI+G C E
Sbjct: 323 LDRKLAPNVYTYNTVMSALCKAGRLDQAHRLFGVMLASDCTPPNAITYRALIHGLCLKME 382
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+E A+ L M +G PDV Y T+ + +++ AF+L + M A D +RT
Sbjct: 383 LERAVLLLDAMAKRGCAPDVACYGTIVAAFCKQGRIDEAFELLERMP---FAGDKVMFRT 439
Query: 361 FIDGLCK 367
+ LCK
Sbjct: 440 LVRALCK 446
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 167/378 (44%), Gaps = 17/378 (4%)
Query: 35 TVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAV--TFTS 92
+ L K + G + N + CK G V L R ++ F+ A T++
Sbjct: 34 ATIELLKDMAENGSTLSIQDLNGCLRGLCKAGNVDGALEFL-REAKNSFSLRASVSTYSI 92
Query: 93 LIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN 152
L+ L A R +A L ++ G E + TY+ +I+ L ++G A L E M S N
Sbjct: 93 LVAALTAAKRNNDALELLEQMESVGLEADKDTYSLIIHSLCKSGMVDKAKVLVERMISRN 152
Query: 153 ------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
E G VD+A E+ + D VVTY S++ GF A
Sbjct: 153 CVPDARIYDPVIEELSKTGRVDEAVEIAKEA-DAKHCTSVVTYNSLVLGFLKARRLKRGI 211
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
+ M G P++ T+N++ + L ++G A +LL M Q GV P+ +N+L++G
Sbjct: 212 KVFTRMARTGPSPDIYTYNILFEGLSRHGLWRFAYKLLPRMNQDGVLPDVVTFNSLINGL 271
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
R +RA L M S GC +Y+IL+ +N + + L+ +L + + P+V
Sbjct: 272 VEDNRYHRAVTLIQEMVSRGCDPNAITYTILLKWLARNARTDECVELFQRLLDRKLAPNV 331
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEM-QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
YNT+ L + ++++A +LF M D + TYR I GLC + AV L
Sbjct: 332 YTYNTVMSALCKAGRLDQAHRLFGVMLASDCTPPNAITYRALIHGLCLKMELERAVLLLD 391
Query: 380 TLRILKCELDIRAYNCLI 397
+ C D+ Y ++
Sbjct: 392 AMAKRGCAPDVACYGTIV 409
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 138/314 (43%), Gaps = 37/314 (11%)
Query: 94 IKGLCAESRIMEAAALFTKLR-VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN 152
++GLC + A + + F +V TY+ L+ L AL L E+M S
Sbjct: 58 LRGLCKAGNVDGALEFLREAKNSFSLRASVSTYSILVAALTAAKRNNDALELLEQMES-- 115
Query: 153 GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
G+E D TY+ +I C + ++AK L+ M+ +
Sbjct: 116 --VGLEADKD-------------------TYSLIIHSLCKSGMVDKAKVLVERMISRNCV 154
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA------FVYNTLMDGFCLTGRV 266
P+ ++ +++EL K G++DEA ++I +A YN+L+ GF R+
Sbjct: 155 PDARIYDPVIEELSKTGRVDEA-------VEIAKEADAKHCTSVVTYNSLVLGFLKARRL 207
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
R ++F M G + +++Y+IL G ++ A L M G+ PDVV +N+L
Sbjct: 208 KRGIKVFTRMARTGPSPDIYTYNILFEGLSRHGLWRFAYKLLPRMNQDGVLPDVVTFNSL 267
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
L E ++ RA L EM G + TY + L +N+ E VELF+ L K
Sbjct: 268 INGLVEDNRYHRAVTLIQEMVSRGCDPNAITYTILLKWLARNARTDECVELFQRLLDRKL 327
Query: 387 ELDIRAYNCLIDGL 400
++ YN ++ L
Sbjct: 328 APNVYTYNTVMSAL 341
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 82/172 (47%), Gaps = 1/172 (0%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P ++ IL LA+N D + LF+RL L P++YTYN +++ CK GR+
Sbjct: 290 RGCDPNAITYTILLKWLARNARTDECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRLDQ 349
Query: 71 GFVVLGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
+ G +L S C PNA+T+ +LI GLC + + A L + GC P+V Y T++
Sbjct: 350 AHRLFGVMLASDCTPPNAITYRALIHGLCLKMELERAVLLLDAMAKRGCAPDVACYGTIV 409
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
+ G A L E M + V +L L+ E I+ D +
Sbjct: 410 AAFCKQGRIDEAFELLERMPFAGDKVMFRTLVRALCKLQLRSFSEQISCDEI 461
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 1/138 (0%)
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK-GIKPDVVI 322
G + EL M G T ++ + + G CK ++GAL E + ++ V
Sbjct: 30 GNLRATIELLKDMAENGSTLSIQDLNGCLRGLCKAGNVDGALEFLREAKNSFSLRASVST 89
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
Y+ L L + A +L ++M+ G+ AD TY I LCK+ + +A L +
Sbjct: 90 YSILVAALTAAKRNNDALELLEQMESVGLEADKDTYSLIIHSLCKSGMVDKAKVLVERMI 149
Query: 383 ILKCELDIRAYNCLIDGL 400
C D R Y+ +I+ L
Sbjct: 150 SRNCVPDARIYDPVIEEL 167
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 177/364 (48%), Gaps = 23/364 (6%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 95
+++F + + PD + Y +++ C+ GR V+L + + F PN V + +LI
Sbjct: 161 AMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALID 220
Query: 96 GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEF 155
G C + A +F + C PNV TY LI+GL ++G
Sbjct: 221 GYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGK------------------ 262
Query: 156 GVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNV 215
V++A LF +M + + P+VVTYT++I+G C A LL M G+ PN
Sbjct: 263 -----VERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPND 317
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
TF+V++D LCK K++EA L +++ GV+ N VY +L+DG C TG+++ A EL
Sbjct: 318 WTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQK 377
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
M S G SYS LI+G C+ K++ A + +M+ KGI+ V Y + L
Sbjct: 378 MISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVG 437
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
E K+FD+M G+ D TY F+ C+ + +A + + ++ YN
Sbjct: 438 SEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNT 497
Query: 396 LIDG 399
LI G
Sbjct: 498 LIRG 501
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 185/398 (46%), Gaps = 16/398 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
PP+ N L LA+++ + + SL R+ + +L TY LIN +C G +
Sbjct: 39 PPLRCLNTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCLAGDIPAAKQH 94
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L + P++ +TS + G C + A +F + + GC FTY L++GL
Sbjct: 95 LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154
Query: 135 TGHTIVALNLFEEMASGNGEFG-------VEGFVDKAKELFLQMK-----DENINPDVVT 182
G A+ +F M + + V G + + ++ P++V
Sbjct: 155 AGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVV 214
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G+C A + A + M PNV T+ ++ LCK+GK++ A L M+
Sbjct: 215 YNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMV 274
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ PN Y L+ G C G + A L ME+ G +++S+LI+ CK +++E
Sbjct: 275 EAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVE 334
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A G ++ KG+K + V+Y +L L + +++ A +L +M +G D +Y + I
Sbjct: 335 EAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLI 394
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
DGLC+ + +A + + + Y +ID L
Sbjct: 395 DGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDEL 432
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 180/409 (44%), Gaps = 26/409 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +N L + L +F+ ++ P++ TY LI+ CK G+V V+
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R++ + PN VT+T+LI+G C E + A L + G PN +T++ LI+ L +
Sbjct: 270 FSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329
Query: 135 TGHTIVALNLFEEMASGNGEFGVE-------------GFVDKAKELFLQMKDENINPDVV 181
+ LF G E G +D A EL +M E PD
Sbjct: 330 R-EKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAH 388
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+Y+S+I G C ++A +L +MM++G+Q + VT+ +I+DEL + + ++ D M
Sbjct: 389 SYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM 448
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
I G+ P+ Y + +C GR+ A+ + V M G + +Y+ LI GY +
Sbjct: 449 IATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLV 508
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLF------------VVLFEIHQVERAFKLFDEMQRD 349
A S + M+ KG KP+ Y L V +++I ++ L +++
Sbjct: 509 SQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITER 568
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
+ Y FI LC+ + EA F ++ Y +ID
Sbjct: 569 QLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIID 617
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 185/419 (44%), Gaps = 63/419 (15%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +F L K + D L + + S+ DL Y +LIN K R+
Sbjct: 386 PTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKET 445
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + PN VT+TS+I G C + A +F + GC PN +TY +LI GL +
Sbjct: 446 LNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQ 505
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ + KA L +M+++ I P V+TYT++I+G C +
Sbjct: 506 -----------------------DKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKH 542
Query: 195 DWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+++ A L EMM+Q G+ P+ +NV+ D LCK+G+ +EA L ++ GV Y
Sbjct: 543 EFDNA-FRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VRKGVVLTKVTY 598
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS------- 306
+L+DGF G + A L M + GC +++YS+L+ CK K++ ALS
Sbjct: 599 TSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTV 658
Query: 307 ----------------------------LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
L+ EM+S G KP Y +I ++E
Sbjct: 659 SGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEE 718
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
A L EM+RDGV D TY FI+G YI A + + CE + Y L+
Sbjct: 719 AEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLL 777
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 180/358 (50%), Gaps = 14/358 (3%)
Query: 53 YTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 112
Y+Y ILI C+ V V++ ++ + N T+T LIKGLC E RI +A L +
Sbjct: 250 YSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDE 309
Query: 113 LRVFGCEPNVFTYNTLINGLYRTGHTIVALN---LFEEMASGNGEFGVE--------GFV 161
+ + G P+V+TYN +I+G ++G AL L E+ ++ G +
Sbjct: 310 MPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKL 369
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
D+A+EL P V+T+T++I G+C A ++A + M+ + ++ + V+
Sbjct: 370 DEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVL 429
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
++ L K ++ EA L+ M G+ PN Y +++DG+C G V A E+F ME GC
Sbjct: 430 INVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGC 489
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
++Y LI G ++K++ A++L +M GI P V+ Y TL + H+ + AF+
Sbjct: 490 HPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFR 549
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
LF+ M+++G+ D Y D LCK+ EA ++ L Y L+DG
Sbjct: 550 LFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVV---LTKVTYTSLVDG 604
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 192/387 (49%), Gaps = 29/387 (7%)
Query: 16 PVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR--VSHGFV 73
P C +N+ L + + + L+ L GL PD TYN +I +CK G ++H +
Sbjct: 144 PKC-YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYF 202
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
L R S + T +L+ G C S + +A L + + GC N ++Y LI GL
Sbjct: 203 CLLR--ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLC 260
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
V +A L M + + ++ TYT +I+G C
Sbjct: 261 EA-----------------------RCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKE 297
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
++A+ LL EM +GV P+V T+N ++D CK+G+M +A + LM Q G P+ + Y
Sbjct: 298 GRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTY 357
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N+L+ G C G+++ A+EL + G T TV +++ LINGYCK + I+ AL + M+S
Sbjct: 358 NSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMIS 416
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
K D+ Y L VL + +++ A + +EM +G+A + TY + IDG CK +
Sbjct: 417 SNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGA 476
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A+E+F+ + C + Y LI GL
Sbjct: 477 ALEVFKLMEHEGCHPNAWTYGSLIYGL 503
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 173/363 (47%), Gaps = 11/363 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ +L L K + + GL P++ TY +I+ +CK+G V V +
Sbjct: 425 AYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLM 484
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
PNA T+ SLI GL + ++ +A AL TK++ G P V TY TLI G +
Sbjct: 485 EHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEF 544
Query: 139 IVALNLFEEMASGNG----EFGVEGFVD------KAKELFLQMKDENINPDVVTYTSVIR 188
A LFE M NG E D +A+E + + + + VTYTS++
Sbjct: 545 DNAFRLFE-MMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVD 603
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
GF A + + A L+ +M+++G + ++ T++V++ LCK K++EA +LD M GV+
Sbjct: 604 GFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKC 663
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
N Y ++ G+ + AK LF M S G + +Y++ I+ YCK IE A L
Sbjct: 664 NIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLI 723
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
GEM G+ PDVV YN + ++RAF M + WTY + K
Sbjct: 724 GEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKM 783
Query: 369 SYI 371
S I
Sbjct: 784 SLI 786
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 167/414 (40%), Gaps = 31/414 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L K +D LF+ + GL PD YN+L + CK GR +
Sbjct: 526 PGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF 585
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +R VT+TSL+ G AA L K+ GC+ +++TY+ L+ L +
Sbjct: 586 L---VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCK 642
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
AL++ ++M E EG D AK LF +M P T
Sbjct: 643 QKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATT 702
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT I +C EA+ L+ EM GV P+VVT+N+ ++ G +D A L M+
Sbjct: 703 YTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMV 762
Query: 243 QIGVRPNAFVYNTLMDGFCLTG----------------RVNRAKELFVSMESMGCTHTVF 286
PN + Y L+ F +N +L M G TV
Sbjct: 763 DASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVV 822
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+YS +I G+CK +E A L ML K I P+ IY L +I +A +M
Sbjct: 823 TYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDM 882
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G +Y I GLC A LF L + + A+ L DGL
Sbjct: 883 IEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGL 936
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 146/336 (43%), Gaps = 28/336 (8%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++++L L K K + LS+ ++ +G+ ++ Y I+I+ K G+ H + +
Sbjct: 632 TYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEM 691
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ S P+A T+T I C RI EA L ++ G P+V TYN ING G+
Sbjct: 692 ISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYI 751
Query: 139 IVALNLFEEMASGNGEFGV-----------------EGFVDKAK-----------ELFLQ 170
A + + M + E +VD + +L +
Sbjct: 752 DRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLER 811
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M +NP VVTY+S+I GFC A EA LL M+ + + PN + +++ C
Sbjct: 812 MMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKL 871
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+A + MI+ G +P Y+ L+ G C G +RAK LF + M H ++ I
Sbjct: 872 FGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKI 931
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
L +G K ++ L M ++ + D Y+ L
Sbjct: 932 LNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSML 967
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 196/402 (48%), Gaps = 21/402 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S+N L L +K ++ +F+ + + + PD+ TYN +I +C++G+ F
Sbjct: 212 PSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAFEK 271
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P+ +T+ +LI+ AE L+ ++ G E Y+ +I GL +
Sbjct: 272 LKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCK 331
Query: 135 TGHTIVALNLFEEMASGNGEFGVE------------GFVDKAKELFLQMKDENINPDVVT 182
G + +FE M S + V G + +A LF +MK E + PD VT
Sbjct: 332 DGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVT 391
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMD----QGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
Y ++ C + +EA +E M+ +GV N + ++ ++D L K+G++DEA R+
Sbjct: 392 YGVIVNSLCKSGRLDEA----LEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIF 447
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
M++ G P+++ YN L+D G+++ A L ME GC TV++Y+ILI G +
Sbjct: 448 YEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFRE 507
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
E AL+L+ M+ KGI P + L L +V RA K+ DEM GV +T +
Sbjct: 508 HRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIPET-AF 566
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I+ LCK I EA +L + E+ R LI+ L
Sbjct: 567 DDMINILCKAGRIKEACKLADGIVDRGREIPGRVRTVLINAL 608
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 177/379 (46%), Gaps = 25/379 (6%)
Query: 23 LFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSC 82
L LA N D+V S+F + GL +Y+ N LI F +G V V R+ +
Sbjct: 150 LIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKENG 209
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
P+ ++ L+ GL I A +F + P+V TYNT+I G G T A
Sbjct: 210 IEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKA- 268
Query: 143 NLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN-DWNEAKC 201
FE++ KA EL N+ PD +TY ++I+ CYA D++
Sbjct: 269 --FEKL--------------KAMEL------RNVAPDKITYMTLIQA-CYAEGDFDSCLG 305
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
L EM ++G++ +++++ LCK+GK E + + MI G + N +Y L+D
Sbjct: 306 LYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNA 365
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
G + A LF M+ G +Y +++N CK+ ++ AL KG+ + +
Sbjct: 366 KCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAM 425
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
Y++L L + +V+ A ++F EM + G D++ Y ID L K I EA+ L + +
Sbjct: 426 FYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRM 485
Query: 382 RILKCELDIRAYNCLIDGL 400
+ C+ + Y LI GL
Sbjct: 486 EVDGCDQTVYTYTILITGL 504
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 152/344 (44%), Gaps = 16/344 (4%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
+P + ++ C A+ +D+ L L+ ++ GL + Y+++I CK G+ G+
Sbjct: 281 APDKITYMTLIQACYAEG-DFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGY 339
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
V ++ N +T+LI + EA LF +++ G EP+ TY ++N L
Sbjct: 340 TVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSL 399
Query: 133 YRTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPD 179
++G AL + E SG G G G VD+A+ +F +M + PD
Sbjct: 400 CKSGRLDEALE-YMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPD 458
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
Y ++I +EA L M G V T+ +++ L + + +EA L D
Sbjct: 459 SYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWD 518
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
LMI G+ P A + L G CL+G+V RA ++ M MG ++ +IN CK
Sbjct: 519 LMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIPET-AFDDMINILCKAG 577
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
I+ A L ++ +G + + L L + + A KL
Sbjct: 578 RIKEACKLADGIVDRGREIPGRVRTVLINALRKAGNADLALKLM 621
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 92/216 (42%)
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S+I + K + + + G+ V + N ++ G ++E + M
Sbjct: 147 YVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMK 206
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ P+ F YN L++G + + A+ +F ME+ V +Y+ +I GYC+ +
Sbjct: 207 ENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTR 266
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A M + + PD + Y TL + + L+ EM G+ Y I
Sbjct: 267 KAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVI 326
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
GLCK+ VE +F + C+ ++ Y LID
Sbjct: 327 GGLCKDGKRVEGYTVFENMISKGCKANVAIYTALID 362
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 13/162 (8%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
Y + + PP +N L LAK D L+L KR+ G +YTY ILI +
Sbjct: 448 YEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFRE 507
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
R + ++ TP A F +L GLC ++ A + ++ G P +
Sbjct: 508 HRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIPET-AF 566
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKEL 167
+ +IN L + G A L +G VD+ +E+
Sbjct: 567 DDMINILCKAGRIKEACKL------------ADGIVDRGREI 596
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 173/364 (47%), Gaps = 23/364 (6%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP FN+L L + + ++F + S G+ + ++N +I+ C+ G +
Sbjct: 113 PPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAET 172
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ R+ + TP+ T+ +LI+GLC RI +A +F K+ G +PN + LI+
Sbjct: 173 LHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHC 232
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ G L EL +M++ + PD VTY +++ G C A
Sbjct: 233 KKGDAETML-----------------------ELHREMRERGVRPDAVTYNAIVNGLCRA 269
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
D A +++EM G++P+ VT+ ++D CK ++D A + M+ GV + Y
Sbjct: 270 RDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTY 329
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
L+ G GR A+ + M G +Y+++I+ +C+ +++ L L EM +
Sbjct: 330 TALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQN 389
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG KP VV YN + ++ Q++ A L + M GV+ D TY +DG CK+ + +
Sbjct: 390 KGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTD 449
Query: 374 AVEL 377
EL
Sbjct: 450 IEEL 453
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 167/336 (49%), Gaps = 16/336 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M + R V SFN + + + D +L +R++ G+ PD+YTY LI
Sbjct: 138 VFDEMQS-RGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGL 196
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C++GR+ V ++ PNAV FT LI C + L ++R G P+
Sbjct: 197 CRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDA 256
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG-------VEGF-----VDKAKELFLQ 170
TYN ++NGL R A + EM S ++G+ +D A E+
Sbjct: 257 VTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQN 316
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M E + D VTYT++I G A +A+ +L EMM+ G++P+ T+ +++D C+ G
Sbjct: 317 MVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGD 376
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ RLL M G +P YN +M+GFC G++ A L +M ++G + +Y+I
Sbjct: 377 VKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNI 436
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
L++G+CK+ ++ L +KG PD+ +Y ++
Sbjct: 437 LLDGHCKHGKVTDIEELKS---AKGTVPDLGVYTSI 469
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 148/307 (48%), Gaps = 12/307 (3%)
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------- 157
EA A + +L G P +N L+ L R G A N+F+EM S V
Sbjct: 99 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 158
Query: 158 -----EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
G +D A+ L +M + + PDV TY ++I+G C +A+ + +M +G++
Sbjct: 159 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 218
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
PN V F +++D CK G + L M + GVRP+A YN +++G C + A +
Sbjct: 219 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 278
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
V M S G +Y+ LI+GYCK +E++ A+ + M+++G+ D V Y L L +
Sbjct: 279 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSK 338
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
+ A ++ EM G+ D TY ID C+ + + L + ++ + +
Sbjct: 339 AGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVT 398
Query: 393 YNCLIDG 399
YN +++G
Sbjct: 399 YNVIMNG 405
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 118/233 (50%)
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
+LQ+ D + P+ + ++R + A+ + EM +GV+ VV+FN ++ +C+
Sbjct: 104 YLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCR 163
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
G +D A L M + GV P+ + Y L+ G C GR+ A+ +F M G
Sbjct: 164 AGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVV 223
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
++ILI+ +CK + E L L+ EM +G++PD V YN + L ++ A + EM+
Sbjct: 224 FTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMR 283
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G+ DT TY T IDG CK + A+E+ + + LD Y LI GL
Sbjct: 284 SAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGL 336
>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840-like [Vitis vinifera]
Length = 1131
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 196/400 (49%), Gaps = 18/400 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++IL L +N +F ++ GL P + TY+ LI+ FCK + GF +
Sbjct: 378 PNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGL 437
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
G +LR P+ V + LI GL + + EA F + G N + +N LI+G +R
Sbjct: 438 YGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFR 497
Query: 135 TGHTIVALNLFEEMA---------------SGNGEFGVEGFVDKAKELFLQMKDENINPD 179
T L ++ M G E +G +D+A LF Q+ + +PD
Sbjct: 498 LKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAE---QGRLDEALALFFQLLKKGFSPD 554
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
+ Y ++I GFC D + M G+ P++ +NV+++ + G ++ LL
Sbjct: 555 HIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLR 614
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
+I+ G+ P+ YNT++ G+C ++A +LF ++ +++ILI+ YCK+
Sbjct: 615 EIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDG 674
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
++ A+ ++ ML +G +P+++ Y+ L F+ E AF+L+++M D V+ + +Y
Sbjct: 675 RMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYS 734
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
IDGLCK + EA F+ D+ AY LI G
Sbjct: 735 ILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRG 774
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 207/453 (45%), Gaps = 68/453 (15%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
FD M+ PSP V +F+ L K D SL+ + G+ PDL Y+ILIN
Sbjct: 263 FDMMVRSGPSPNLV-TFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLF 321
Query: 64 KMGRVSHG-------------------------FVVLG----------RILRSCFTPNAV 88
+ G++ G +V +G R+L+ +PN V
Sbjct: 322 RAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVV 381
Query: 89 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM 148
T++ LI GLC R++EA +F ++ G EP+V TY++LI+G ++ E +
Sbjct: 382 TYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKS----------ENL 431
Query: 149 ASGNGEFGV----------------------EGFVDKAKELFLQMKDENINPDVVTYTSV 186
G G +G+ +G +D+A F Q + + + ++
Sbjct: 432 RDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNAL 491
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G + + I M V P+VVT+ V++ L + G++DEA L +++ G
Sbjct: 492 IDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGF 551
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+ +Y TL+DGFC ++F M+S G + Y++LIN + + +E L
Sbjct: 552 SPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLE 611
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L E++ G++PD+V YNT+ + +A KLF+ ++ + T+ ID C
Sbjct: 612 LLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYC 671
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
K+ + +A+ +F ++ E +I Y+CLIDG
Sbjct: 672 KDGRMDDAMLIFSSMLERGPEPNILTYSCLIDG 704
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 188/392 (47%), Gaps = 14/392 (3%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+ +F K + L+ + L GL P + N ++ C ++ ++
Sbjct: 208 YEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMV 267
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
RS +PN VTF++LI C E R+ EA +L+ + G P++ Y+ LINGL+R G
Sbjct: 268 RSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLE 327
Query: 140 VALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
+LF MA G + G + KA E++ +M E I+P+VVTY+ +
Sbjct: 328 EGNSLFS-MALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSIL 386
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G C EA + +++ QG++P+V+T++ ++D CK+ + + L +M++ G
Sbjct: 387 INGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGH 446
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+ V + L++G G ++ A F G T + ++ LI+G + K L
Sbjct: 447 VPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLK 506
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
+Y M + PDVV Y L L E +++ A LF ++ + G + D Y T IDG C
Sbjct: 507 MYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFC 566
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
K +++F+ ++ DI YN LI+
Sbjct: 567 KKRDPATGLQIFKLMQSNGIFPDICIYNVLIN 598
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 182/377 (48%), Gaps = 17/377 (4%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F ++ ML + P V ++L L++ D L F + GL + Y +N LI+
Sbjct: 435 FGLYGIMLR-KGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALID 493
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
++ R G + + P+ VT+T L+KGL + R+ EA ALF +L G P
Sbjct: 494 GCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSP 553
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG-------------VEGFVDKAKEL 167
+ Y TLI+G + L +F+ M S NG F EG V+ EL
Sbjct: 554 DHIIYCTLIDGFCKKRDPATGLQIFKLMQS-NGIFPDICIYNVLINMFFREGCVENVLEL 612
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG-VQPNVVTFNVIMDELC 226
++ + PD+VTY ++I G+C +++A L E++ G QPN +TF +++D C
Sbjct: 613 LREIIKYGLEPDIVTYNTMICGYCSLKIFSKA-IKLFEVLKCGRTQPNAITFTILIDAYC 671
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
K+G+MD+A + M++ G PN Y+ L+DG+ T A EL+ M + +
Sbjct: 672 KDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIV 731
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
SYSILI+G CK +E A + + + + PDV+ Y L ++ ++ A L+D M
Sbjct: 732 SYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHM 791
Query: 347 QRDGVAADTWTYRTFID 363
+G+ D + +
Sbjct: 792 LVNGIMPDDLLQKALAE 808
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 23/349 (6%)
Query: 52 LYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 111
L Y + N F K G V G ++ P V ++KGLC ++I A+ F
Sbjct: 205 LGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFD 264
Query: 112 KLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQM 171
+ G PN+ T++TLIN + E +D+A L+ M
Sbjct: 265 MMVRSGPSPNLVTFSTLIN-----------------------VYCKELRLDEAFSLYNLM 301
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
++ I PD+V Y+ +I G A E L + +GV+ +VV F+ IMD + G +
Sbjct: 302 IEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDL 361
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
+A + M++ G+ PN Y+ L++G C GRV A +F + G +V +YS L
Sbjct: 362 GKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSL 421
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I+G+CK++ + LYG ML KG PDVV+ + L L ++ A + F + + G+
Sbjct: 422 IDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGL 481
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + + IDG + + ++++ + + K D+ Y L+ GL
Sbjct: 482 TLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGL 530
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 94/233 (40%), Gaps = 48/233 (20%)
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMI-----------------QIGVRPNAFVYNTLM 257
V +F I L ++ D A+R+ D M+ G P+ VY+ L+
Sbjct: 89 VQSFCGIAHVLLRHRMFDPATRVFDRMVGQFGNLEVLGEFHGSFRNYGSNPST-VYSFLL 147
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFS------------------------------ 287
+C G V+RA + F M MG + + ++
Sbjct: 148 HCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEMCKGLGV 207
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y + N + K E+E L+ + ++ +G+ P +V N + L +Q+ A FD M
Sbjct: 208 YEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMV 267
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
R G + + T+ T I+ CK + EA L+ + D+ Y+ LI+GL
Sbjct: 268 RSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGL 320
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IF ML P P + +++ L K ++ ++ L++++ + P++ +Y+ILI+
Sbjct: 682 IFSSMLERGPEPN-ILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGL 740
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G + + + P+ + + LI+G C R+ EA L+ + V G P+
Sbjct: 741 CKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDD 800
Query: 123 FTYNTLINGLYRTGHTIVALNLFEE 147
L ++ + +F E
Sbjct: 801 LLQKALAEYGFQDSQASIYSTVFPE 825
>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 733
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 196/435 (45%), Gaps = 52/435 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + N L D + +R+ + P++ TYN LI +C + R+ +
Sbjct: 202 PDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMEL 261
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK-LRVFGCEPNVFTYNTLINGLY 133
+ + +P+ +++ +++ LC E RI E L K L+ P+ TYNT ++ L
Sbjct: 262 IAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLS 321
Query: 134 RTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
+ GH AL E F EG +DKAKE+ +M + PDVV
Sbjct: 322 KHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVV 381
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYTSVI G C ++AK +L +M G +PN V++ +++ LCKNG EA ++++
Sbjct: 382 TYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMS 441
Query: 242 IQIGVRPNAFVYNTLMDGF-----------------------------------CLTGRV 266
+ PNA Y+ LM GF C +V
Sbjct: 442 EEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKV 501
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ AK + GC V +++ +I+G+C+ ++E ALSL +M PDVV Y T+
Sbjct: 502 DEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTI 561
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF-RTLRILK 385
L + ++E A KL +M R G+ TYRT I C+ + + ++L + L +
Sbjct: 562 IDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQE 621
Query: 386 CELDIRAYNCLIDGL 400
C AYN +I+ L
Sbjct: 622 CRT---AYNQVIEKL 633
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 172/379 (45%), Gaps = 25/379 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L+K+ H D L + D Y+ +++ FC+ GR+ +
Sbjct: 308 PDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEI 367
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + P+ VT+TS+I GLC E ++ +A + ++ GC+PN +Y L+NGL +
Sbjct: 368 VNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCK 427
Query: 135 TGHTIVA---LNLFEE------------MASGNGEFGVEGFVDKAKELFLQMKDENINPD 179
G+++ A +N+ EE + G F EG +A +L +M + P
Sbjct: 428 NGNSLEAREMMNMSEEDWWIPNAITYSVLMHG---FRREGKSSEACDLVREMIKKGFFPT 484
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
V +I+ C +EAK + + ++ G NVV F ++ C+ ++ A LLD
Sbjct: 485 PVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLD 544
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M P+ Y T++D GR+ A +L + M +G T +Y +I+ YC+
Sbjct: 545 DMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMG 604
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
+E L L +MLS+ + YN + L +E+A+KL ++ R D T
Sbjct: 605 RVEDLLKLLEKMLSR--QECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCH 662
Query: 360 TFIDGLCKNSYIVEAVELF 378
I+ SY+ + + L
Sbjct: 663 MLIE-----SYLSKGIPLM 676
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 174/399 (43%), Gaps = 50/399 (12%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
P+ + Y ++ + + G++ + VL + ++ P+ + I L +R+ +A
Sbjct: 169 PEAFGYVMV--SYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRF 226
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM------ASGNGEFGVEGFV-- 161
++++ EPNV TYN LI G A+ L EM + V GF+
Sbjct: 227 LERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCK 286
Query: 162 -DKAKELFLQM----KDENINPDVVT---------------------------------- 182
+ KE+ L M KD N+ PD VT
Sbjct: 287 EKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKV 346
Query: 183 -YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y++++ FC ++AK ++ EM +G P+VVT+ +++ LC+ K+D+A ++L M
Sbjct: 347 GYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQM 406
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G +PN Y L++G C G A+E+ E +YS+L++G+ + +
Sbjct: 407 YKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKS 466
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A L EM+ KG P V N L L + +V+ A + ++ +G A + + T
Sbjct: 467 SEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTV 526
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I G C+ + A+ L + + D+ Y +ID L
Sbjct: 527 IHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDAL 565
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 114/274 (41%), Gaps = 38/274 (13%)
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
AK + M I + V+ + A A +L M G++P++ N +
Sbjct: 153 AKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIH 212
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
L ++D+A R L+ M + + PN YN L+ G+C R+ A EL M GC+
Sbjct: 213 VLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSP 272
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKG-IKPDVVIYNTLFVVLFEIH-------- 334
SY ++ CK K I+ L +ML + PD V YNT FV + H
Sbjct: 273 DKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNT-FVHMLSKHGHGDEALE 331
Query: 335 ----------------------------QVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
++++A ++ +EM G D TY + I+GLC
Sbjct: 332 FLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLC 391
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + +A ++ R + C+ + +Y L++GL
Sbjct: 392 QERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGL 425
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 103/220 (46%), Gaps = 1/220 (0%)
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D + Y +++ AK +L M + ++ F +M + GK+ A R+L
Sbjct: 133 DPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVL 192
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
+M + G+ P+ + NT + + R+++A M+ + V +Y+ LI GYC
Sbjct: 193 TMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDL 252
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG-VAADTWT 357
+E A+ L EM KG PD + Y T+ L + +++ L ++M +D + D T
Sbjct: 253 HRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVT 312
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
Y TF+ L K+ + EA+E R + +D Y+ ++
Sbjct: 313 YNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIV 352
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 64/151 (42%)
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q R + VY +++ T AK + M ++ ++ Y + ++
Sbjct: 127 QWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLR 186
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ + M GI+PD+ I NT VL +++++A + + MQ + + TY I
Sbjct: 187 NAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLI 246
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
G C + +A+EL + C D +Y
Sbjct: 247 KGYCDLHRLEDAMELIAEMPFKGCSPDKISY 277
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 50/117 (42%)
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
H Y ++ K K +GA + M + I+ + + V ++ A ++
Sbjct: 132 HDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRV 191
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
MQ+ G+ D T I L + + +AV ++I++ E ++ YNCLI G
Sbjct: 192 LTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKG 248
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 189/384 (49%), Gaps = 13/384 (3%)
Query: 29 KNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 88
K D+ L LF ++N G+ P+ TY ++I CK G + + + ++ +P
Sbjct: 341 KQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVF 400
Query: 89 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM 148
SLI+G EA+ LF + G NVFTYN+L++ L + G A +++E+M
Sbjct: 401 NVNSLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACSIWEKM 459
Query: 149 ASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
V +G +D A +F++M ++ + P+++TY+ ++ G+ D
Sbjct: 460 VRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDT 519
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
A L M + + P+ T N+I++ LCK G+ E+ L ++Q G P YN +
Sbjct: 520 EYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCI 579
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DGF G VN A ++ M +G + VF+Y+ LING+CK+ ++ AL + EM +KGI
Sbjct: 580 IDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGI 639
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+ DV +Y L + A +L E+Q G++ + Y + I G K + A+
Sbjct: 640 ELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALH 699
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
L + + D++ Y LI GL
Sbjct: 700 LHKRMINEGIPCDLQIYTTLISGL 723
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 172/354 (48%), Gaps = 23/354 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++++L K + L+ R+ + P +T NI+IN CK GR S
Sbjct: 501 PNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDR 560
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++++ F P +T+ +I G E + A A++T++ G PNVFTY LING +
Sbjct: 561 LKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCK 620
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ + +AL + +EM K++ I DV Y ++I GFC
Sbjct: 621 SNNMDLALKVMDEM-----------------------KNKGIELDVTVYCALIDGFCRKG 657
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
D A LL E+ + G+ PN V ++ ++ K M+ A L MI G+ + +Y
Sbjct: 658 DMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYT 717
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+ G G++ A EL+ M + G + +YS+LI+G C ++E A + +M K
Sbjct: 718 TLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRK 777
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
+ P V IYNTL F+ ++ AF+L +EM G+ D TY ++G K+
Sbjct: 778 CMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKD 831
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 195/398 (48%), Gaps = 25/398 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
I++ M N SP V + N L K + + LF + G+ +++TYN L++
Sbjct: 386 IYNQMKNKDISPT-VFNVNSLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSLLSWL 443
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G++S + +++R P+ V++ ++I G C + + A +F ++ G +PN+
Sbjct: 444 CKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNL 503
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TY+ L++G ++ G T A L++ +M+ ENI P T
Sbjct: 504 ITYSVLMDGYFKKGDTEYAFGLYD-----------------------RMRGENIAPSDFT 540
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+I G C A +E++ L +++ +G P +T+N I+D K G ++ A + M
Sbjct: 541 CNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMC 600
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+IGV PN F Y L++GFC + ++ A ++ M++ G V Y LI+G+C+ ++
Sbjct: 601 KIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMV 660
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L E+ G+ P+ V+Y+++ ++ +E A L M +G+ D Y T I
Sbjct: 661 NASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLI 720
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GL K ++ A EL+ + D+ Y+ LI GL
Sbjct: 721 SGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGL 758
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 192/408 (47%), Gaps = 50/408 (12%)
Query: 40 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC- 98
F+ + G+ D Y+I+I CK +L + + P+ V FT +I G+C
Sbjct: 247 FREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVI-GVCM 305
Query: 99 AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM-----ASGNG 153
+ +++EA + ++ G NV TL+ G + G AL LF++M N
Sbjct: 306 KQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNV 365
Query: 154 EFGV-------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
+ V G +DKA E++ QMK+++I+P V S+IRG+ A EA L E
Sbjct: 366 TYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEA 425
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+ G+ NV T+N ++ LCK GKM EA + + M++ GVRP+ YN ++ G C G +
Sbjct: 426 VACGIA-NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDM 484
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP-----DVV 321
+ A +FV M G + +YS+L++GY K + E A LY M + I P +++
Sbjct: 485 DSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNII 544
Query: 322 I------------------------------YNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I YN + + V A ++ EM + GV
Sbjct: 545 INGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGV 604
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + +TY I+G CK++ + A+++ ++ ELD+ Y LIDG
Sbjct: 605 SPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDG 652
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 151/349 (43%), Gaps = 24/349 (6%)
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 110
D +N L+N + K R++ ++ P + L + I EA ++
Sbjct: 153 DSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVY 212
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQ 170
K+ G + + T + +I R EG +++A+ F +
Sbjct: 213 NKMASKGVKGDCATISVMIRASMR-----------------------EGKLEEAEGWFRE 249
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
K++ + D Y+ VI C D A LL EM D+G P+ V F ++ K GK
Sbjct: 250 AKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGK 309
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
M EA ++ M+ G N V TLM G+C G ++ A ELF M G +Y++
Sbjct: 310 MLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAV 369
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+I CKN ++ A +Y +M +K I P V N+L + E A KLFDE G
Sbjct: 370 IIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACG 429
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ A+ +TY + + LCK + EA ++ + + +YN +I G
Sbjct: 430 I-ANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILG 477
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 116/264 (43%), Gaps = 48/264 (18%)
Query: 16 PVC-SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P C ++N + K ++ L+++ + G+ P+++TY LIN FCK + V
Sbjct: 571 PTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKV 630
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + + + +LI G C + ++ A+ L ++L+ G PN Y+++I+G +
Sbjct: 631 MDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRK 690
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+ AL+L + M + EG + A EL+ +M + I PD++T
Sbjct: 691 LQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLIT 750
Query: 183 YTSVIRGFCYANDWNEA---------KCL---------LI-----------------EMM 207
Y+ +I G C A KC+ LI EM+
Sbjct: 751 YSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEML 810
Query: 208 DQGVQPNVVTFNVIMDELCKNGKM 231
D+G+ P+ T++++++ K+G +
Sbjct: 811 DKGLVPDDTTYDILVNGKVKDGNL 834
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 17/175 (9%)
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
D G P+VV +I E+SR LD ++ V+N L++ + T R+N
Sbjct: 129 DWGPVPSVVVARLI-----------ESSRRLDF------ESDSRVFNYLLNSYVKTKRIN 171
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A + F S+ + +I ++ KN I A +Y +M SKG+K D + +
Sbjct: 172 DAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMI 231
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
++E A F E + GV D Y I+ +CK V A+ L R +R
Sbjct: 232 RASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMR 286
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
VF+Y L+N Y K K I A+ + ++ K I P + + N L + + + A +++
Sbjct: 156 VFNY--LLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYN 213
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+M GV D T I + + EA FR + ELD RAY+ +I+ +
Sbjct: 214 KMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAV 269
>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
Length = 796
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 196/435 (45%), Gaps = 52/435 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + N L D + +R+ + P++ TYN LI +C + R+ +
Sbjct: 265 PDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMEL 324
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK-LRVFGCEPNVFTYNTLINGLY 133
+ + +P+ +++ +++ LC E RI E L K L+ P+ TYNT ++ L
Sbjct: 325 IAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLS 384
Query: 134 RTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
+ GH AL E F EG +DKAKE+ +M + PDVV
Sbjct: 385 KHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVV 444
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYTSVI G C ++AK +L +M G +PN V++ +++ LCKNG EA ++++
Sbjct: 445 TYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMS 504
Query: 242 IQIGVRPNAFVYNTLMDGF-----------------------------------CLTGRV 266
+ PNA Y+ LM GF C +V
Sbjct: 505 EEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKV 564
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ AK + GC V +++ +I+G+C+ ++E ALSL +M PDVV Y T+
Sbjct: 565 DEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTI 624
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF-RTLRILK 385
L + ++E A KL +M R G+ TYRT I C+ + + ++L + L +
Sbjct: 625 IDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQE 684
Query: 386 CELDIRAYNCLIDGL 400
C AYN +I+ L
Sbjct: 685 CRT---AYNQVIEKL 696
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 172/379 (45%), Gaps = 25/379 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L+K+ H D L + D Y+ +++ FC+ GR+ +
Sbjct: 371 PDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEI 430
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + P+ VT+TS+I GLC E ++ +A + ++ GC+PN +Y L+NGL +
Sbjct: 431 VNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCK 490
Query: 135 TGHTIVA---LNLFEE------------MASGNGEFGVEGFVDKAKELFLQMKDENINPD 179
G+++ A +N+ EE + G F EG +A +L +M + P
Sbjct: 491 NGNSLEAREMMNMSEEDWWIPNAITYSVLMHG---FRREGKSSEACDLVREMIKKGFFPT 547
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
V +I+ C +EAK + + ++ G NVV F ++ C+ ++ A LLD
Sbjct: 548 PVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLD 607
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M P+ Y T++D GR+ A +L + M +G T +Y +I+ YC+
Sbjct: 608 DMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMG 667
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
+E L L +MLS+ + YN + L +E+A+KL ++ R D T
Sbjct: 668 RVEDLLKLLEKMLSR--QECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCH 725
Query: 360 TFIDGLCKNSYIVEAVELF 378
I+ SY+ + + L
Sbjct: 726 MLIE-----SYLSKGIPLM 739
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 174/399 (43%), Gaps = 50/399 (12%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
P+ + Y ++ + + G++ + VL + ++ P+ + I L +R+ +A
Sbjct: 232 PEAFGYVMV--SYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRF 289
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------GEFGVEGFV-- 161
++++ EPNV TYN LI G A+ L EM + V GF+
Sbjct: 290 LERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCK 349
Query: 162 -DKAKELFLQM----KDENINPDVVT---------------------------------- 182
+ KE+ L M KD N+ PD VT
Sbjct: 350 EKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKV 409
Query: 183 -YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y++++ FC ++AK ++ EM +G P+VVT+ +++ LC+ K+D+A ++L M
Sbjct: 410 GYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQM 469
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G +PN Y L++G C G A+E+ E +YS+L++G+ + +
Sbjct: 470 YKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKS 529
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A L EM+ KG P V N L L + +V+ A + ++ +G A + + T
Sbjct: 530 SEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTV 589
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I G C+ + A+ L + + D+ Y +ID L
Sbjct: 590 IHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDAL 628
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 178/379 (46%), Gaps = 17/379 (4%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +FNI+ L K + S G+ P + TYN L+ + GR+ +++
Sbjct: 226 VYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIIS 285
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ F P+ T+ ++ +C E R A+ + +++ G P+ +YN LI G G
Sbjct: 286 EMKSKGFQPDLQTYNPILSWMCNEGR---ASEVLREMKGIGLVPDSVSYNILIRGCSNNG 342
Query: 137 HTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
A +EM +G F +E ++ A+ L +++++ I D VTY
Sbjct: 343 DLETAFAYRDEMVKQGMVPTFYTYNTLIHGLF-MENKIEAAEILIREIREKGIVLDSVTY 401
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
VI G+C D +A L EMM G++P T+ ++ LC+ K EA L + ++
Sbjct: 402 NIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVG 461
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G++P+ + NTLMDG C TG ++RA L M+ M +Y+ L+ G C + E
Sbjct: 462 KGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEE 521
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A L GEM +GIKPD + YNTL + + AF + DEM G TY +
Sbjct: 522 ARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLK 581
Query: 364 GLCKNSYIVEAVELFRTLR 382
GL KN A EL R ++
Sbjct: 582 GLSKNQDGELAEELLREMK 600
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 171/367 (46%), Gaps = 17/367 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N L + + + + S G PDL TYN +++ C GR S V
Sbjct: 259 PTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASE---V 315
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P++V++ LI+G + A A ++ G P +TYNTLI+GL+
Sbjct: 316 LREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFM 375
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
A L E+ NG + G KA L +M + I P
Sbjct: 376 ENKIEAAEILIREIREKGIVLDSVTYNIVING-YCQHGDAKKAFALHDEMMTDGIKPTQF 434
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYTS+I C N EA L +++ +G++P++V N +MD C G MD A LL M
Sbjct: 435 TYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEM 494
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++ + P+ YN LM G C G+ A+EL M+ G SY+ LI+GY K +
Sbjct: 495 DRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDT 554
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A + EMLS G P ++ YN L L + E A +L EM+ +G+ + ++ +
Sbjct: 555 KHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSV 614
Query: 362 IDGLCKN 368
I+ + K+
Sbjct: 615 IEAMSKS 621
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 172/367 (46%), Gaps = 26/367 (7%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
D + F + G P T N +++ ++ R+ + +V + R N TF +
Sbjct: 173 DEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIM 232
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG 153
I LC E ++ +A + FG +P + TYNTL+ G
Sbjct: 233 INVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQG---------------------- 270
Query: 154 EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
+ + G ++ A+ + +MK + PD+ TY ++ C + A +L EM G+ P
Sbjct: 271 -YSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMC---NEGRASEVLREMKGIGLVP 326
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
+ V++N+++ NG ++ A D M++ G+ P + YNTL+ G + ++ A+ L
Sbjct: 327 DSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILI 386
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
+ G +Y+I+INGYC++ + + A +L+ EM++ GIKP Y +L VL
Sbjct: 387 REIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRR 446
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
++ A +LF+++ G+ D T +DG C + A L + + + + D Y
Sbjct: 447 NKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTY 506
Query: 394 NCLIDGL 400
NCL+ GL
Sbjct: 507 NCLMRGL 513
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 108/246 (43%), Gaps = 32/246 (13%)
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
++R +C +EA M ++G P T N I+ L + +++ A M ++
Sbjct: 162 MVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRME 221
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
++ N + +N +++ C G++ +AK MES G T+ +Y+ L+ GY IEGA
Sbjct: 222 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGAR 281
Query: 306 SLYGEMLSKGIKPDVVIYNTLFV----------VLFEIHQV------------------- 336
+ EM SKG +PD+ YN + VL E+ +
Sbjct: 282 MIISEMKSKGFQPDLQTYNPILSWMCNEGRASEVLREMKGIGLVPDSVSYNILIRGCSNN 341
Query: 337 ---ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
E AF DEM + G+ +TY T I GL + I A L R +R LD Y
Sbjct: 342 GDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTY 401
Query: 394 NCLIDG 399
N +I+G
Sbjct: 402 NIVING 407
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 3/197 (1%)
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
L+ D+ + + F+ ++ C+ +DEA LM + G P N ++
Sbjct: 144 LVLAHDRLQTKSTILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSR 203
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
R+ A + M M V++++I+IN CK +++ A G M S GIKP +V
Sbjct: 204 LNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVT 263
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
YNTL ++E A + EM+ G D TY + +C A E+ R ++
Sbjct: 264 YNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEG---RASEVLREMK 320
Query: 383 ILKCELDIRAYNCLIDG 399
+ D +YN LI G
Sbjct: 321 GIGLVPDSVSYNILIRG 337
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 64/141 (45%), Gaps = 3/141 (2%)
Query: 262 LTGRVNRAKELF---VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
++ R N ++LF V T + + ++ YC+ + ++ A+ + M KG P
Sbjct: 130 VSTRKNSVRDLFDELVLAHDRLQTKSTILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDP 189
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
N + +L ++++E A+ + +M R + ++ +T+ I+ LCK + +A
Sbjct: 190 KTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFL 249
Query: 379 RTLRILKCELDIRAYNCLIDG 399
+ + I YN L+ G
Sbjct: 250 GIMESFGIKPTIVTYNTLVQG 270
>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
Length = 1031
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 193/422 (45%), Gaps = 40/422 (9%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N + K + L + + G+ DLYTYNI+I+ CK+ R + +++
Sbjct: 262 PNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLL 321
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R+ TP+ ++ +LI G E +I A +F ++ +P+V TY LI+G R
Sbjct: 322 LKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCR 381
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF-VDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
G T A + EM GV V KAK++ M + I+PDV+TY+++I G C
Sbjct: 382 NGRTDEARRVLYEMQIT----GVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKM 437
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+E K +L M GV PN V + ++ CK G EA + + + G+ N+ ++
Sbjct: 438 GMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIH 497
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N L+ F G + A++ M M + V S++ +I+ YC+ + A S+Y M+
Sbjct: 498 NALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVR 557
Query: 314 KGIKPDVVIY-----------------------------------NTLFVVLFEIHQVER 338
G PD+ Y NTL V + + ++
Sbjct: 558 HGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDE 617
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A L ++M + DT+TY +DG CK IV A+ L + + D AY CL++
Sbjct: 618 ALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLN 677
Query: 399 GL 400
GL
Sbjct: 678 GL 679
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 191/414 (46%), Gaps = 38/414 (9%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFP-DLYTYNILINCFCKMGRVSHGFVVLGRIL 79
NIL + NK L L + L+ FP D+ T NI++N C G++S +L + +
Sbjct: 200 NILNALVGINKSEYVWLFLKESLDRK--FPLDVTTCNIVLNSLCTQGKLSKAESMLQK-M 256
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
++C PNAVT+ +++ + R A + + G E +++TYN +I+ L + +
Sbjct: 257 KNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSA 316
Query: 140 VALNLFEEMASGN-------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
A L + M N G FG EG ++ A +F QM +++ P V TYT++
Sbjct: 317 RAYLLLKRMREVNLTPDECSYNTLIHGFFG-EGKINLAIYIFNQMLRQSLKPSVATYTAL 375
Query: 187 IRGFCYANDWNEAKCLLIEM--------------------MDQGVQPNVVTFNVIMDELC 226
I G+C +EA+ +L EM + G+ P+V+T++ +++ +C
Sbjct: 376 IDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMC 435
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
K G + E +L M + GV PN +Y TL+ FC G A + FV + G
Sbjct: 436 KMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSV 495
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
++ L+ + + I A M I DV +N + + V AF ++D M
Sbjct: 496 IHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNM 555
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
R G D TY + + GLC+ ++V+A E L C +D + N L+ G+
Sbjct: 556 VRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGI 609
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 180/378 (47%), Gaps = 15/378 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+ N L + K+ D L L +++ + + PD YTY IL++ FCK G++ ++L +
Sbjct: 601 TLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMM 660
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF-GCEPNVFTYNTLINGLYRTGH 137
L P+ + +T L+ GL E ++ A+ +F ++ G + YN+++NG + G
Sbjct: 661 LEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQ 720
Query: 138 TIVALNLFEEM-------ASGNGEFGVEGFVDKAK-----ELFLQMKDENINPDVVTYTS 185
L M +S + + G++ K + L+ M E I PD VTY
Sbjct: 721 INEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRL 780
Query: 186 VIRGFCYANDWNEAKCLLIEMM--DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
+I G C A L +M+ + G+QP + +++ C+ G +D A L + M
Sbjct: 781 LIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKA 840
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
+GV P+ ++++ G C G+V A +F S+ G T+ +++ L++G CK +I+
Sbjct: 841 LGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDD 900
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A L M S G+K DVV YN L L + A L++EM+ G+ + TY T
Sbjct: 901 AFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTG 960
Query: 364 GLCKNSYIVEAVELFRTL 381
+ + + +L + +
Sbjct: 961 AMYATGTMQDGEKLLKDI 978
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 184/418 (44%), Gaps = 33/418 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR------- 67
P CS+N L + + +F ++ L P + TY LI+ +C+ GR
Sbjct: 332 PDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRV 391
Query: 68 -------------VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLR 114
VS +L +L P+ +T+++LI G+C I E + ++++
Sbjct: 392 LYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQ 451
Query: 115 VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVD 162
G PN Y TL+ + GH AL F ++ F EG +
Sbjct: 452 KSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIA 511
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
+A++ M I+ DV ++ +I +C + EA + M+ G P++ T+ ++
Sbjct: 512 EAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLL 571
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
LC+ G + +A + +++ + NTL+ G C G ++ A +L M +
Sbjct: 572 RGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNIL 631
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
++Y+IL++G+CK +I AL L ML KG+ PD + Y L L QV+ A +
Sbjct: 632 PDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYM 691
Query: 343 FDEMQ-RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
F E+ ++G+ AD Y + ++G K I E L R + + +YN L+ G
Sbjct: 692 FQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHG 749
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 170/402 (42%), Gaps = 25/402 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F ++D M+ PP +C++ L L + H L D T N L+
Sbjct: 549 FSVYDNMVR-HGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLV 607
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK G + + +++ P+ T+T L+ G C +I+ A L + G P
Sbjct: 608 GICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVP 667
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
+ Y L+NGL G A +F+E+ G + D
Sbjct: 668 DTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYA----------------------DC 705
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+ Y S++ G+ NE + L+ M + V P+ ++N++M K G++ L
Sbjct: 706 IAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRD 765
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM--ESMGCTHTVFSYSILINGYCKN 298
M++ G++P+ Y L+ G C G + A + M E G Y LIN C+
Sbjct: 766 MVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRV 825
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+I+GA L +M + G+ P V +++ L + +VE A +F + R G+ T+
Sbjct: 826 GDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATF 885
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
T + GLCK I +A L + + ++D+ YN LI GL
Sbjct: 886 TTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGL 927
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 181/415 (43%), Gaps = 69/415 (16%)
Query: 33 YDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV------------------------ 68
+ ++L R + T LF + ++L+N + K G+V
Sbjct: 145 FSSLLRTISRCDPTNLF----SVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNN 200
Query: 69 -----------SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 117
+ ++ L L F + T ++ LC + ++ +A ++ K++
Sbjct: 201 ILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMK--N 258
Query: 118 CE-PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF---VDK---------A 164
C PN TYNT++N + G AL + ++M E + + +DK A
Sbjct: 259 CRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARA 318
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
L +M++ N+ PD +Y ++I GF N A + +M+ Q ++P+V T+ ++D
Sbjct: 319 YLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDG 378
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
C+NG+ DEA R+L M GVRP V++AK++ M + G
Sbjct: 379 YCRNGRTDEARRVLYEMQITGVRPR---------------EVSKAKQILKCMLADGIDPD 423
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
V +YS LING CK I + M G+ P+ V+Y TL + + A K F
Sbjct: 424 VITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFV 483
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
++ R G+ A++ + + + I EA + + + +K D+ ++NC+ID
Sbjct: 484 DIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDS 538
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 139/336 (41%), Gaps = 62/336 (18%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N + K + + L + ++ ++P +YNIL++ + K G++S + +
Sbjct: 707 AYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDM 766
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF---GCEPNVFTYNTLINGLYRT 135
++ P+ VT+ LI GLC E ++E A F + V G +P Y LIN R
Sbjct: 767 VKEGIKPDNVTYRLLIFGLC-EYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRV 825
Query: 136 GHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
G +D A EL MK + P V +S++RG C
Sbjct: 826 GD-----------------------IDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGK 862
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
EA + +M G+ P + TF +M LCK K+D+A L LM G++ + YN
Sbjct: 863 VEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNV 922
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L+ G C N C I AL LY EM SKG
Sbjct: 923 LITGLC-------------------------------NKKC----ICDALDLYEEMKSKG 947
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
+ P++ Y TL ++ ++ KL +++ G+
Sbjct: 948 LLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGI 983
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 151/359 (42%), Gaps = 51/359 (14%)
Query: 65 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL--RVFGCEP-N 121
+ R++H + + IL P+ S+++ L +A+F+ L + C+P N
Sbjct: 104 LDRITHIYCMAVHILVQAQMPSQAM--SVLRHLALTG--FSCSAIFSSLLRTISRCDPTN 159
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
+F+ + L+N + G + D A +F M + +
Sbjct: 160 LFSVDLLVNAYVKEGKVL----------------------DAAAAIFF-MDECGFKASLF 196
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+ +++ N L E +D+ +V T N++++ LC GK+ +A +L M
Sbjct: 197 SCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKM 256
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ PNA YNT+++ + GR A + ME G +++Y+I+I+ CK K
Sbjct: 257 KNCRL-PNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRS 315
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A L M + PD YNTL F ++ A +F++M R + TY
Sbjct: 316 ARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTAL 375
Query: 362 IDGLCKNSYIVEA--------------VELFRTLRILKCEL------DIRAYNCLIDGL 400
IDG C+N EA E+ + +ILKC L D+ Y+ LI+G+
Sbjct: 376 IDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINGM 434
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 43 LNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 102
L +GL P Y LIN C++G + F + + P+ V +S+++GLC +
Sbjct: 803 LEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGK 862
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVD 162
+ EA +F+ + G P + T+ TL++GL + EF + D
Sbjct: 863 VEEAIIVFSSIMRAGMVPTIATFTTLMHGLCK-------------------EFKI----D 899
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
A L M+ + DVVTY +I G C +A L EM +G+ PN+ T+ +
Sbjct: 900 DAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLT 959
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPN 249
+ G M + +LL + G+ P+
Sbjct: 960 GAMYATGTMQDGEKLLKDIEDRGIVPS 986
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 177/374 (47%), Gaps = 15/374 (4%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG-LFPDLYTYNILINCFCKM 65
+L P P V ++N + L + + + G + P+ YTY +I+ +CK+
Sbjct: 176 LLRQMPRPNAV-TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 234
Query: 66 GRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFT 124
GRV V +L + P AV + +LI G C + ++ A ++ G V T
Sbjct: 235 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 294
Query: 125 YNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMK 172
YN L++ L+ G A L EEM V EG V KA E+F M
Sbjct: 295 YNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMS 354
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 232
+ VVTYTS+I E L E + +G++P++V +N +++ +G +D
Sbjct: 355 RRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 414
Query: 233 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
A ++ M + + P+ YNTLM G CL GRV+ A++L M G + +Y+ LI
Sbjct: 415 RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLI 474
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
+GY +++ AL + EM++KG P ++ YN L L + Q + A + EM +G+
Sbjct: 475 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 534
Query: 353 ADTWTYRTFIDGLC 366
D TY + I+GL
Sbjct: 535 PDDSTYISLIEGLT 548
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 186/416 (44%), Gaps = 23/416 (5%)
Query: 1 FCIFDYMLNMRPSPPPVCS--FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNIL 58
F +F M +R P+C+ FNI+ L L L +++ P+ TYN +
Sbjct: 139 FALFADMFRLRL---PLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTV 191
Query: 59 INCFCKMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 117
I FC GRV ++ + R PN T+ ++I G C R+ EA +F ++ G
Sbjct: 192 IAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKG 251
Query: 118 -CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKA 164
+P YN LI G G AL + M V +G +A
Sbjct: 252 EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEA 311
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
EL +M + + DV TY +I G C + +A + M +GV+ VVT+ ++
Sbjct: 312 YELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYA 371
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
L K G++ E +L D ++ G+RP+ +YN L++ +G ++RA E+ ME
Sbjct: 372 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 431
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
+Y+ L+ G C ++ A L EM +GI+PD+V YNTL V+ A ++ +
Sbjct: 432 DVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRN 491
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
EM G TY I GLCKN +A + + + D Y LI+GL
Sbjct: 492 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 547
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 190/452 (42%), Gaps = 93/452 (20%)
Query: 16 PVCSFNILFGCLAKNKHYDTVLSLFKRLNST----------------------GLFPDLY 53
P N+L A + + T L L+ R+ S LF D++
Sbjct: 87 PSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAFALFADMF 146
Query: 54 ---------TYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 104
T+NI++ C G+ + +LR PNAVT+ ++I G C+ R+
Sbjct: 147 RLRLPLCTTTFNIMLRHLCSAGKPARAL----ELLRQMPRPNAVTYNTVIAGFCSRGRVQ 202
Query: 105 EAAALFTKLRVFG-CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDK 163
A + ++R G PN +TY T+I+G + G A+ +F+EM + GE
Sbjct: 203 AALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT-KGE--------- 252
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
+ P+ V Y ++I G+C + A M+++GV V T+N+++
Sbjct: 253 ------------VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVH 300
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
L +G+ EA L++ M G+ + F YN L++G C G V +A E+F +M G
Sbjct: 301 ALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRA 360
Query: 284 TVFSYS-----------------------------------ILINGYCKNKEIEGALSLY 308
TV +Y+ LIN + + I+ A +
Sbjct: 361 TVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIM 420
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
GEM K I PD V YNTL L + +V+ A KL DEM + G+ D TY T I G
Sbjct: 421 GEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMK 480
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +A+ + + + YN LI GL
Sbjct: 481 GDVKDALRIRNEMMNKGFNPTLLTYNALIQGL 512
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 134/284 (47%), Gaps = 23/284 (8%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++N+L L + L + + GL D++TYNILIN CK G V +
Sbjct: 292 VATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFE 351
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ R VT+TSLI L + ++ E LF + G P++ YN LIN
Sbjct: 352 NMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS----- 406
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
H+ SGN +D+A E+ +M+ + I PD VTY +++RG C
Sbjct: 407 HS----------TSGN--------IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 448
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+EA+ L+ EM +G+QP++VT+N ++ G + +A R+ + M+ G P YN L
Sbjct: 449 DEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNAL 508
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+ G C G+ + A+ + M G T +Y LI G E
Sbjct: 509 IQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 552
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 177/373 (47%), Gaps = 15/373 (4%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG-LFPDLYTYNILINCFCKM 65
+L P P V ++N + L + + + G + P+ YTY +I+ +CK+
Sbjct: 63 LLRQMPRPNAV-TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 121
Query: 66 GRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFT 124
GRV V +L + P AV + +LI G C + ++ A ++ G V T
Sbjct: 122 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 181
Query: 125 YNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMK 172
YN L++ L+ G A L EEM V EG V KA E+F M
Sbjct: 182 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 241
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 232
+ VVTYTS+I E L E + +G++P++V +N +++ +G +D
Sbjct: 242 RRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 301
Query: 233 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
A ++ M + + P+ YNTLM G CL GRV+ A++L M G + +Y+ LI
Sbjct: 302 RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLI 361
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
+GY +++ AL + EM++KG P ++ YN L L + Q + A + EM +G+
Sbjct: 362 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 421
Query: 353 ADTWTYRTFIDGL 365
D TY + I+GL
Sbjct: 422 PDDSTYISLIEGL 434
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 187/416 (44%), Gaps = 23/416 (5%)
Query: 1 FCIFDYMLNMRPSPPPVCS--FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNIL 58
F +F M +R P+C+ FNI+ L L L +++ P+ TYN +
Sbjct: 26 FALFADMFRLRL---PLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTV 78
Query: 59 INCFCKMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 117
I FC GRV ++ + R PN T+ ++I G C R+ EA +F ++ G
Sbjct: 79 IAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKG 138
Query: 118 -CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKA 164
+P YN LI G G AL + M V +G +A
Sbjct: 139 EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEA 198
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
EL +M + + PDV TY +I G C + +A + M +GV+ VVT+ ++
Sbjct: 199 YELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYA 258
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
L K G++ E +L D ++ G+RP+ +YN L++ +G ++RA E+ ME
Sbjct: 259 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 318
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
+Y+ L+ G C ++ A L EM +GI+PD+V YNTL V+ A ++ +
Sbjct: 319 DVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRN 378
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
EM G TY I GLCKN +A + + + D Y LI+GL
Sbjct: 379 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 434
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 181/410 (44%), Gaps = 71/410 (17%)
Query: 36 VLSLFKRLNSTGLFPDLY---------TYNILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
+LS + LF D++ T+NI++ C G+ + +LR PN
Sbjct: 16 LLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARAL----ELLRQMPRPN 71
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPNVFTYNTLINGLYRTGHTIVALNLF 145
AVT+ ++I G C+ R+ A + ++R G PN +TY T+I+G + G A+ +F
Sbjct: 72 AVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVF 131
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
+EM + GE + P+ V Y ++I G+C + A
Sbjct: 132 DEMLT-KGE---------------------VKPEAVMYNALIGGYCDQGKLDTALLYRDR 169
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M+++GV V T+N+++ L +G+ EA L++ M G+ P+ F YN L++G C G
Sbjct: 170 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN 229
Query: 266 VNRAKELFVSMESMGCTHTVFSYS-----------------------------------I 290
V +A E+F +M G TV +Y+
Sbjct: 230 VKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 289
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LIN + + I+ A + GEM K I PD V YNTL L + +V+ A KL DEM + G
Sbjct: 290 LINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRG 349
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ D TY T I G + +A+ + + + YN LI GL
Sbjct: 350 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGL 399
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 135/284 (47%), Gaps = 23/284 (8%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++N+L L + L + + GL PD++TYNILIN CK G V +
Sbjct: 179 VATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE 238
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ R VT+TSLI L + ++ E LF + G P++ YN LIN
Sbjct: 239 NMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS----- 293
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
H+ SGN +D+A E+ +M+ + I PD VTY +++RG C
Sbjct: 294 HS----------TSGN--------IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 335
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+EA+ L+ EM +G+QP++VT+N ++ G + +A R+ + M+ G P YN L
Sbjct: 336 DEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNAL 395
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+ G C G+ + A+ + M G T +Y LI G E
Sbjct: 396 IQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 439
>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
Length = 1095
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 197/393 (50%), Gaps = 18/393 (4%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFP-DLYTYNILINCFCKMGRVSHGFVVLGRIL 79
NIL + NK L L + L+ FP D+ T NI++N C G++S +L + +
Sbjct: 200 NILNALVGINKSEYVWLFLKESLDRK--FPLDVTTCNIVLNSLCTQGKLSKAESMLQK-M 256
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
++C PNAVT+ +++ + R A + + G E +++TYN +I+ L + +
Sbjct: 257 KNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSA 316
Query: 140 VALNLFEEMASGN-------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
A L + M N G FG EG ++ A +F QM +++ P V TYT++
Sbjct: 317 RAYLLLKRMREVNLTPDECSYNTLIHGFFG-EGKINLAIYIFNQMLRQSLKPSVATYTAL 375
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G+C +EA+ +L EM GV+P+ +T++ +++ CK+ K+ A L+ + +
Sbjct: 376 IDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSI 435
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
N +Y L+DGFC G V++AK++ M + G V +YS LING CK I
Sbjct: 436 SINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKE 495
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
+ M G+ P+ V+Y TL + + A K F ++ R G+ A++ + +
Sbjct: 496 ILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFY 555
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ I EA + + + +K D+ ++NC+ID
Sbjct: 556 REGMIAEAEQFKQYMSRMKISFDVASFNCIIDS 588
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 196/429 (45%), Gaps = 47/429 (10%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++NI+ L K K L KR+ L PD +YN LI+ F G+++ + ++
Sbjct: 301 TYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQM 360
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
LR P+ T+T+LI G C R EA + ++++ G P+ TY+ L+NG +
Sbjct: 361 LRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKL 420
Query: 139 IVALNLFEEMASGNGEFG-------VEGF-----VDKAKELFLQMKDENINPDVVTYTSV 186
AL+L + + S + ++GF V KAK++ M + I+PDV+TY+++
Sbjct: 421 GPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSAL 480
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G C +E K +L M GV PN V + ++ CK G EA + + + G+
Sbjct: 481 INGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGL 540
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
N+ ++N L+ F G + A++ M M + V S++ +I+ YC+ + A S
Sbjct: 541 VANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFS 600
Query: 307 LYGEMLSKGIKPDVVIY-----------------------------------NTLFVVLF 331
+Y M+ G PD+ Y NTL V +
Sbjct: 601 VYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGIC 660
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIR 391
+ ++ A L ++M + DT+TY +DG CK +V A+ L + + D
Sbjct: 661 KHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTI 720
Query: 392 AYNCLIDGL 400
AY CL++GL
Sbjct: 721 AYTCLLNGL 729
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 187/399 (46%), Gaps = 14/399 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N + K + L + + G+ DLYTYNI+I+ CK+ R + +++
Sbjct: 262 PNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLL 321
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R+ TP+ ++ +LI G E +I A +F ++ +P+V TY LI+G R
Sbjct: 322 LKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCR 381
Query: 135 TGHTIVALNLFEEM-------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G T A + EM A NG + + A +L ++ +I+ +
Sbjct: 382 NGRTDEARRVLYEMQITGVRPSELTYSALLNG-YCKHSKLGPALDLIKYLRSRSISINRT 440
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
YT +I GFC + ++AK +L M+ G+ P+V+T++ +++ +CK G + E +L M
Sbjct: 441 MYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRM 500
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ GV PN +Y TL+ FC G A + FV + G ++ L+ + + I
Sbjct: 501 QKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMI 560
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A M I DV +N + + V AF ++D M R G D TY +
Sbjct: 561 AEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSL 620
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ GLC+ ++V+A E L C +D + N L+ G+
Sbjct: 621 LRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGI 659
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 186/407 (45%), Gaps = 13/407 (3%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
Y + + P +++ L K+ L L K L S + + Y ILI+ FC++
Sbjct: 393 YEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQL 452
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
G VS +L +L P+ +T+++LI G+C I E + ++++ G PN Y
Sbjct: 453 GEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLY 512
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKD 173
TL+ + GH AL F ++ F EG + +A++ M
Sbjct: 513 TTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSR 572
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
I+ DV ++ +I +C + EA + M+ G P++ T+ ++ LC+ G + +
Sbjct: 573 MKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQ 632
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A + +++ + NTL+ G C G ++ A +L M + ++Y+IL++
Sbjct: 633 AKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLD 692
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ-RDGVA 352
G+CK ++ AL L ML KG+ PD + Y L L QV+ A +F E+ ++G+
Sbjct: 693 GFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLY 752
Query: 353 ADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
AD Y + ++G K I E L R + + +YN L+ G
Sbjct: 753 ADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHG 799
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 164/333 (49%), Gaps = 24/333 (7%)
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 110
D+ ++N +I+ +C+ G V F V ++R + P+ T+ SL++GLC +++A
Sbjct: 578 DVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFM 637
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQ 170
L C + T NTL+ G+ + G AL+L E+M +
Sbjct: 638 VYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVT-------------------- 677
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
NI PD TYT ++ GFC A LL M+++G+ P+ + + +++ L G+
Sbjct: 678 ---RNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQ 734
Query: 231 MDEASRLLDLMI-QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+ AS + +I + G+ + YN++M+G+ G++N + L +M + SY+
Sbjct: 735 VKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYN 794
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
IL++GY K ++ L LY +M+ +GIKPD V Y L L E +E A K ++M +
Sbjct: 795 ILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLE 854
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
GV D + I + S + A++LF ++
Sbjct: 855 GVFPDNLAFDILIKAFSEKSKMSNALQLFSYMK 887
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 182/394 (46%), Gaps = 54/394 (13%)
Query: 33 YDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV------------------------ 68
+ ++L R + T LF + ++L+N + K G+V
Sbjct: 145 FSSLLRTISRCDPTNLF----SVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNN 200
Query: 69 -----------SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 117
+ ++ L L F + T ++ LC + ++ +A ++ K++
Sbjct: 201 ILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMK--N 258
Query: 118 CE-PNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF---VDK---------A 164
C PN TYNT++N + G AL + ++M E + + +DK A
Sbjct: 259 CRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARA 318
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
L +M++ N+ PD +Y ++I GF N A + +M+ Q ++P+V T+ ++D
Sbjct: 319 YLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDG 378
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
C+NG+ DEA R+L M GVRP+ Y+ L++G+C ++ A +L + S +
Sbjct: 379 YCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISIN 438
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
Y+ILI+G+C+ E+ A + ML+ GI PDV+ Y+ L + ++ + ++
Sbjct: 439 RTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILS 498
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
MQ+ GV + Y T + CK + EA++ F
Sbjct: 499 RMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYF 532
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 180/392 (45%), Gaps = 29/392 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+ N L + K+ D L L +++ + + PD YTY IL++ FCK G+V ++L +
Sbjct: 651 TLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMM 710
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF-GCEPNVFTYNTLINGLYRTGH 137
L P+ + +T L+ GL E ++ A+ +F ++ G + YN+++NG + G
Sbjct: 711 LEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQ 770
Query: 138 TIVALNLFEEM-------ASGNGEFGVEGFVDKAK-----ELFLQMKDENINPDVVTYTS 185
L M +S + + G++ K + L+ M E I PD VTY
Sbjct: 771 INEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRL 830
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I G C A L +M+ +GV P+ + F++++ + KM A +L M +G
Sbjct: 831 LIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVG 890
Query: 246 ----------------VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
V P+ ++++ G C G+V A +F S+ G T+ +++
Sbjct: 891 DIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFT 950
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
L++G CK +I+ A L M S G+K DVV YN L L + A L++EM+
Sbjct: 951 TLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSK 1010
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
G+ + TY T + + + +L + +
Sbjct: 1011 GLLPNITTYITLTGAMYATGTMQDGEKLLKDI 1042
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 149/329 (45%), Gaps = 26/329 (7%)
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
F L R + C N + L+ E ++++AAA + G + ++F+ N ++N
Sbjct: 145 FSSLLRTISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNA 204
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMK-DENINPDVVTYTSVIRGF 190
L V +N E + LFL+ D DV T V+
Sbjct: 205 L-------VGINKSEYVW-----------------LFLKESLDRKFPLDVTTCNIVLNSL 240
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C ++A+ +L +M + + PN VT+N I++ K G+ A R+LD M + G+ +
Sbjct: 241 CTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADL 299
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
+ YN ++D C R RA L M + T SY+ LI+G+ +I A+ ++ +
Sbjct: 300 YTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQ 359
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
ML + +KP V Y L + + A ++ EMQ GV TY ++G CK+S
Sbjct: 360 MLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSK 419
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ A++L + LR ++ Y LIDG
Sbjct: 420 LGPALDLIKYLRSRSISINRTMYTILIDG 448
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 140/333 (42%), Gaps = 42/333 (12%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N + K + + L + ++ ++P +YNIL++ + K G++S + +
Sbjct: 757 AYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDM 816
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
++ P+ VT+ LI GLC I A K+ + G P+ ++ LI
Sbjct: 817 VKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKM 876
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
AL LF M G +D A EL MK + P V +S++RG C E
Sbjct: 877 SNALQLFSYMK-------WVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEE 929
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A + +M G+ P + TF +M LCK K+D+A L LM G++ + YN L+
Sbjct: 930 AIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLIT 989
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G C N C I AL LY EM SKG+ P
Sbjct: 990 GLC-------------------------------NKKC----ICDALDLYEEMKSKGLLP 1014
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
++ Y TL ++ ++ KL +++ G+
Sbjct: 1015 NITTYITLTGAMYATGTMQDGEKLLKDIEDRGI 1047
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 110/273 (40%), Gaps = 30/273 (10%)
Query: 7 MLNMRPSP--PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCK 64
M NM + P S+NIL K L L++ + G+ PD TY +LI C+
Sbjct: 778 MRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCE 837
Query: 65 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT------------- 111
G + L +++ P+ + F LIK +S++ A LF+
Sbjct: 838 YGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFE 897
Query: 112 ---KLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF-------- 160
++ G P+ ++++ GL + G A+ +F + + F
Sbjct: 898 LKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLC 957
Query: 161 ----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
+D A L M+ + DVVTY +I G C +A L EM +G+ PN+
Sbjct: 958 KEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNIT 1017
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 249
T+ + + G M + +LL + G+ P+
Sbjct: 1018 TYITLTGAMYATGTMQDGEKLLKDIEDRGIVPS 1050
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/491 (24%), Positives = 198/491 (40%), Gaps = 128/491 (26%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP V +++ K + +D +F+ + + TYN++I+ C+ G V F
Sbjct: 242 PPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFG 301
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
++ +P+A T+ +L+ GLC R+ EA AL ++ G +PNV Y TL++G
Sbjct: 302 FKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFM 361
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ G A ++ EM S + P+ + Y ++IRG C
Sbjct: 362 KEGKAAEAFDILNEMISAG-----------------------VQPNKIMYDNLIRGLCKI 398
Query: 194 NDWNEAKCLLIEMM-----------------------------------DQGVQPNVVTF 218
A LL EM+ + G+ PN T+
Sbjct: 399 GQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTY 458
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV-------------------------- 252
++++ LC+NG+ EA LL+ MI G++PNAF+
Sbjct: 459 GIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTK 518
Query: 253 ---------YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
YN+L+ G GR+ A+E + ++ G F+YS LI+GYCK + +E
Sbjct: 519 ANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEK 578
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER------------------------- 338
A L +ML+ G+KP+ Y L F+ + E+
Sbjct: 579 ADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIR 638
Query: 339 ----------AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
AF + E++++G+ D Y + I GLCK + + +AV L + E
Sbjct: 639 NLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEP 698
Query: 389 DIRAYNCLIDG 399
I YN LIDG
Sbjct: 699 GIVCYNALIDG 709
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 179/400 (44%), Gaps = 50/400 (12%)
Query: 31 KHYDT--VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 88
+HYD L + ++G+ P+ YTY I+IN C+ G +L ++ PNA
Sbjct: 432 QHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAF 491
Query: 89 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM 148
+ LI G E I A + P++F YN+LI GL G A + ++
Sbjct: 492 MYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQV 551
Query: 149 ASGN---GEFGVEGFV---------DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
EF G + +KA +L QM + + P+ TYT ++ G+ +ND
Sbjct: 552 QKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDH 611
Query: 197 NEAKCLLIEMMDQGVQPN----------------------VVT-------------FNVI 221
+ +L M+ G +P+ V+T ++ +
Sbjct: 612 EKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSL 671
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
+ LCK M++A LLD M + G+ P YN L+DGFC +G ++RA+ +F S+ + G
Sbjct: 672 ISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGL 731
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
+Y+ LI+G CKN +I A LY +ML +GI PD +YN L + +E+A
Sbjct: 732 LPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALF 791
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
L +EM G A + T + G CK + E +L +
Sbjct: 792 LTEEMFNRGY-AHVSLFSTLVRGFCKRGRLQETEKLLHVM 830
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 186/411 (45%), Gaps = 13/411 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F I + M++ P + N++ G L K L + G PD +TY+ L+
Sbjct: 370 FDILNEMISAGVQPNKIMYDNLIRG-LCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQ 428
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+ F +L + S PNA T+ +I GLC EA L ++ G +P
Sbjct: 429 GHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKP 488
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELF 168
N F Y LI G + GH +A E M N G +++A+E +
Sbjct: 489 NAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYY 548
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
Q++ + PD TY+ +I G+C + +A LL +M++ G++PN T+ +++ K+
Sbjct: 549 AQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKS 608
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
++ S +L M+ G +P+ +Y ++ + + A + +E G + Y
Sbjct: 609 NDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIY 668
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
S LI+G CK ++E A+ L EM +G++P +V YN L + RA +FD +
Sbjct: 669 SSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILA 728
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G+ + TY IDG CKN I +A +L++ + D YN L G
Sbjct: 729 KGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATG 779
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 169/381 (44%), Gaps = 23/381 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
++L KN T + + GL P N L+ + + + + G +
Sbjct: 178 LDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFME 237
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+ P+ T+++ ++ C A +F ++R C N TYN +I+GL R+G
Sbjct: 238 GAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVE 297
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
A EEM D ++PD TY +++ G C EA
Sbjct: 298 EAFGFKEEMV-----------------------DYGLSPDAFTYGALMNGLCKGGRLKEA 334
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
K LL EM G++PNVV + ++D K GK EA +L+ MI GV+PN +Y+ L+ G
Sbjct: 335 KALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRG 394
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
C G++ RA +L M +G F+Y L+ G+ ++ + +GA L EM + GI P+
Sbjct: 395 LCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPN 454
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
Y + L + + + A L +EM +G+ + + Y I G K +I A E
Sbjct: 455 AYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLE 514
Query: 380 TLRILKCELDIRAYNCLIDGL 400
+ D+ YN LI GL
Sbjct: 515 NMTKANVLPDLFCYNSLIKGL 535
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 156/354 (44%), Gaps = 39/354 (11%)
Query: 85 PNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP------------------------ 120
P+A F L LCA S +A L ++ + P
Sbjct: 113 PSADAFARLAASLCAASHFPQANGLLHQMILAHPHPPLVLASIQRAIQDSDARSPSPSPS 172
Query: 121 ------NVFTYNTLINGLYRTGHTIV----ALNLFEEMASGNGEFGVEGFVDKAKELFLQ 170
+V NG RT +V L L NG D A EL +
Sbjct: 173 HSTAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRAD-AMELVWK 231
Query: 171 MK----DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
+K I PDV TY++ + C A D++ AK + EM + N VT+NV++ LC
Sbjct: 232 LKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLC 291
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
++G ++EA + M+ G+ P+AF Y LM+G C GR+ AK L M G V
Sbjct: 292 RSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVV 351
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
Y+ L++G+ K + A + EM+S G++P+ ++Y+ L L +I Q+ RA KL +EM
Sbjct: 352 VYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEM 411
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ G DT+TY + G ++ A EL +R + Y +I+GL
Sbjct: 412 IKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGL 465
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 152/349 (43%), Gaps = 52/349 (14%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +N L L+ + + ++ GL PD +TY+ LI+ +CK + +
Sbjct: 523 PDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQL 582
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++L S PNA T+T L++G + + +++ + G +P+ Y +I L R
Sbjct: 583 LQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSR 642
Query: 135 TGHTIVA---------------LNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPD 179
+ + VA L+++ + SG + ++KA L +M E + P
Sbjct: 643 SENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMAD---MEKAVGLLDEMAKEGLEPG 699
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
+V Y ++I GFC + D + A+ + ++ +G+ PN VT+ ++D CKNG + +A L
Sbjct: 700 IVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYK 759
Query: 240 LMIQIGVRPNAFVYN----------------------------------TLMDGFCLTGR 265
M+ G+ P+AFVYN TL+ GFC GR
Sbjct: 760 DMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGFCKRGR 819
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+ ++L M + +I + K ++ A ++ E+ K
Sbjct: 820 LQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQK 868
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 134/297 (45%), Gaps = 20/297 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ MLN P ++L G N H + V S+ + + +G PD + Y I+I
Sbjct: 582 LLQQMLNSGLKPNADTYTDLLEGYFKSNDH-EKVSSILQSMLGSGDKPDNHIYGIVIRNL 640
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
+ + F+VL + ++ P+ ++SLI GLC + + +A L ++ G EP +
Sbjct: 641 SRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGI 700
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMAS---------------GNGEFGVEGFVDKAKEL 167
YN LI+G R+G A N+F+ + + GN + G + A +L
Sbjct: 701 VCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCK---NGDITDAFDL 757
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
+ M D I PD Y + G A D +A L EM ++G +V F+ ++ CK
Sbjct: 758 YKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-HVSLFSTLVRGFCK 816
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
G++ E +LL +M+ + PNA ++ F G++ A +F ++ + +
Sbjct: 817 RGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQS 873
>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 157/296 (53%), Gaps = 23/296 (7%)
Query: 86 NAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
+ V F +L+ GLC E R++EA AL ++ G +PN TY T++NG+ + G T ALNL
Sbjct: 9 DVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSALNLL 68
Query: 146 EEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
+M + +I DVV YT++I C ++A+ L E
Sbjct: 69 R-----------------------KMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTE 105
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M D+G+ PNV+T+N ++D C GK +A +LL MI+ V P+ +N L++ F G+
Sbjct: 106 MHDKGIFPNVLTYNCMIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGK 165
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
++ A+EL+ M +Y+ LI+G+CK+ ++ A ++ M+SKG P+V+ NT
Sbjct: 166 ISEAEELYREMLGRNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINT 225
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
L +V+ KL EM R G+ D+ +Y T I G C+ + A +LF+ +
Sbjct: 226 LIGGCCRAKRVDDGIKLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEM 281
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 140/274 (51%), Gaps = 12/274 (4%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +FN L L + +L R+ G P+ TY ++N CKMG +L
Sbjct: 10 VVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSALNLLR 69
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ S + V +T++I LC + +A LFT++ G PNV TYN +I+G G
Sbjct: 70 KMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCSYG 129
Query: 137 HTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
A L +M N F EG + +A+EL+ +M NI PD +TY
Sbjct: 130 KWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYN 189
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
S+I GFC + ++AK + M+ +G PNV+T N ++ C+ ++D+ +LL M++
Sbjct: 190 SLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRR 249
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
G+ P++ YNTL+ GFC G +N A++LF M S
Sbjct: 250 GLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMIS 283
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 115/229 (50%)
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M ++ DVV + +++ G C EA+ L+ M++ G QPN VT+ I++ +CK G
Sbjct: 1 MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
D A LL M + ++ + +Y ++D C G ++A+ LF M G V +Y+
Sbjct: 61 TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+I+G C + A L +M+ + PDVV +N L + ++ A +L+ EM
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRN 180
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ DT TY + IDG CK+S + +A +F + ++ N LI G
Sbjct: 181 IFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGG 229
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 66/136 (48%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FN L K L++ + +FPD TYN LI+ FCK R+ +
Sbjct: 148 PDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYNSLIDGFCKHSRLDDAKHI 207
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ +PN +T +LI G C R+ + L ++ G P+ +YNTLI+G +
Sbjct: 208 FDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRGLVPDSVSYNTLIHGFCQ 267
Query: 135 TGHTIVALNLFEEMAS 150
G A +LF+EM S
Sbjct: 268 AGDLNAAQDLFQEMIS 283
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M+ KG + DVV +NTL L +V A L D M +G + TY T ++G+CK
Sbjct: 1 MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
A+ L R + + D+ Y +ID L
Sbjct: 61 TDSALNLLRKMDESHIKADVVIYTAIIDRL 90
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
IFD M++ + P V + N L G + K D + L + GL PD +YN LI+ F
Sbjct: 207 IFDLMVS-KGGSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRGLVPDSVSYNTLIHGF 265
Query: 63 CKMG 66
C+ G
Sbjct: 266 CQAG 269
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 209/446 (46%), Gaps = 48/446 (10%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
C+FD M P + S N L L +N L +++++ + G+ PD+++Y I++N
Sbjct: 206 LCVFDNMGKC-GRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVN 264
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG---------------LCAESRIME 105
+CK GRV F + + RSC PN VT+ SLI G L +E I E
Sbjct: 265 AYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPE 324
Query: 106 AAALFTKL--------------RVFGC--EPNVFT----YNTLINGLYRTGHTIVALNLF 145
+ +T L ++ GC E N+F Y LI+ G AL +
Sbjct: 325 NSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIR 384
Query: 146 EEMASGNGEFGVE------------GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ M + G V+KA E+ + MKD N+ PD Y +++ GFC
Sbjct: 385 DAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQ 444
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
D+ +A L EM ++GV VVT+N ++ L G ++ A + +LM + GV PN Y
Sbjct: 445 EDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTY 504
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
TL+D F G +RA ++ S G T ++ Y+ +I G+CK +++ A ++ +M
Sbjct: 505 CTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKE 564
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
G PD + Y TL ++ + A KL D +RDG+++ T Y + I G+ ++ + +
Sbjct: 565 LGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQK 624
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
L ++ + ++ Y LI G
Sbjct: 625 LNGLLAEMKNRELSPNVVTYGSLIAG 650
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 191/415 (46%), Gaps = 58/415 (13%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F+++ A+ L +F + G P L + N L++ + G +V +++
Sbjct: 189 FDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMI 248
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
P+ ++T ++ C E R+ EA ++ CEPNV TYN+LI+G G
Sbjct: 249 ALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGD-- 306
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
V AK++ M ++ I + TYT +I+G+C +A
Sbjct: 307 ---------------------VCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQA 345
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
+ L+ MM++ + + + V++ C G++D+A R+ D M+++G++ N + N+L++G
Sbjct: 346 EKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLING 405
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
+C G VN+A E+ VSM+ + Y+ L++G+CK ++ A L EM +KG+
Sbjct: 406 YCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFT 465
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID---------------- 363
VV YNTL LF + VE A +++ M + GVA + TY T +D
Sbjct: 466 VVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWK 525
Query: 364 -------------------GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G CK +V+A E+F ++ L D Y LIDG
Sbjct: 526 DALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDG 580
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 202/432 (46%), Gaps = 49/432 (11%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++N L L H + L ++ ++ G+ P+ TY L++ F K+G ++
Sbjct: 466 VVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWK 525
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
L FT + + ++I G C ++++A +F K++ G P+ TY TLI+G + G
Sbjct: 526 DALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVG 585
Query: 137 HTIVALNLFEEMASGNG-EFGVEGF------------VDKAKELFLQMKDENINPDVVTY 183
+ + AL L ++M+ +G E + + K L +MK+ ++P+VVTY
Sbjct: 586 NLVEALKL-KDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTY 644
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
S+I G+C ++A +M+D+G+ PN++ + I+ L ++GK+DEA+ +L +
Sbjct: 645 GSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIAD 704
Query: 244 I-----------------------------GVRP------NAFVYNTLMDGFCLTGRVNR 268
I G + N VYN + G C + ++
Sbjct: 705 IDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDD 764
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
+ + + G ++Y LI+ ++ A L +M++ G+ P++V+YN L
Sbjct: 765 VRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALIN 824
Query: 329 VLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
L + ++RA +LF+++ R G++ TY T IDG CK EA+EL +R
Sbjct: 825 GLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICP 884
Query: 389 DIRAYNCLIDGL 400
Y+ LI GL
Sbjct: 885 SSITYSTLIHGL 896
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 167/381 (43%), Gaps = 50/381 (13%)
Query: 39 LFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV------------------------ 74
+F ++ G PD TY LI+ +CK+G + +
Sbjct: 558 IFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVF 617
Query: 75 -----------LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
L + +PN VT+ SLI G C + + +A + K+ G PN+
Sbjct: 618 RSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNII 677
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENIN------ 177
+ +++ LYR G A + ++A + V+ K ++ + I
Sbjct: 678 IGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKK 737
Query: 178 ------PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ + Y I G C + + ++ + +L +++ +G P+ T+ ++ GK+
Sbjct: 738 AMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKV 797
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
+EA L D MI G+ PN VYN L++G C +G ++RA+ LF + G + TV +Y+ L
Sbjct: 798 NEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTL 857
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I+GYCK AL L +M +GI P + Y+TL L+ + E++ L +EM + G
Sbjct: 858 IDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAGK 917
Query: 352 AA---DTWTYRTFIDGLCKNS 369
+ D R ++ K S
Sbjct: 918 GSSVMDPLVARAYVKWRDKQS 938
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 144/318 (45%), Gaps = 23/318 (7%)
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
F+ + F ++K + A +F + G P++ + N+L++ L + G AL
Sbjct: 182 FSFSPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKAL 241
Query: 143 NLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
++E+M + I PD+ +YT ++ +C +EA
Sbjct: 242 LVYEQMIA-----------------------LGILPDIFSYTIMVNAYCKEGRVDEAFNF 278
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
+ EM +PNVVT+N ++D G + A ++L LM + G+ N+ Y L+ G+C
Sbjct: 279 VKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCK 338
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G++ +A++L M Y +LI+ YC ++ AL + ML G+K + VI
Sbjct: 339 RGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVI 398
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
N+L ++ V +A ++ M+ + D++ Y T +DG CK ++A +L +
Sbjct: 399 CNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMH 458
Query: 383 ILKCELDIRAYNCLIDGL 400
+ YN L+ L
Sbjct: 459 NKGVNFTVVTYNTLLKNL 476
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 91/197 (46%), Gaps = 23/197 (11%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+NI L K+K+ D V + L G PD YTY LI+ +G+V+ F + ++
Sbjct: 749 YNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMI 808
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+ PN V + +LI GLC + A LF KL G P V TYNTLI+G + G T
Sbjct: 809 NAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTT 868
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
AL EL +M++E I P +TY+++I G ++
Sbjct: 869 EAL-----------------------ELKDKMREEGICPSSITYSTLIHGLYMEGKSEQS 905
Query: 200 KCLLIEMMDQGVQPNVV 216
LL EMM G +V+
Sbjct: 906 VGLLNEMMKAGKGSSVM 922
>gi|6633861|gb|AAF19720.1|AC008047_27 F2K11.2 [Arabidopsis thaliana]
Length = 332
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 153/288 (53%), Gaps = 22/288 (7%)
Query: 117 GCEPNVFTYNTLINGLYRTGHTIVALNLFEEM--------ASGNGEFGVE-----GFVDK 163
GC PNV T+NTL+N L R G + AL L + M A G + VD+
Sbjct: 5 GCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTAIVDR 64
Query: 164 ---------AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
A+ LF +M ++ I P+V+TY +I FC++ W++A LL M+++ + P+
Sbjct: 65 LCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPD 124
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
+VTF+ +++ K K+ EA + M++ + P YN+++DGFC RV+ AK +
Sbjct: 125 IVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLD 184
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
SM S GC+ V ++S LINGYCK K ++ + ++ EM +GI + V Y TL ++
Sbjct: 185 SMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG 244
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
++ A L +EM GVA D T+ + GLC + +A + L+
Sbjct: 245 DLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 292
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 159/316 (50%), Gaps = 33/316 (10%)
Query: 46 TGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNA----------VTFTSLIK 95
TG P++ T+N L+N C+ GRV ++ R++ PNA V T+++
Sbjct: 4 TGCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTAIVD 63
Query: 96 GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEF 155
LC + + A LFT++ G PNV TYN +I+ +G
Sbjct: 64 RLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRW----------------- 106
Query: 156 GVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNV 215
A +L M ++ INPD+VT++++I F +EA+ + EM+ + P
Sbjct: 107 ------SDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTT 160
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
+T+N ++D CK ++D+A R+LD M G P+ ++TL++G+C RV+ E+F
Sbjct: 161 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 220
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
M G +Y+ LI+G+C+ +++ A L EM+S G+ PD + ++ + L +
Sbjct: 221 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE 280
Query: 336 VERAFKLFDEMQRDGV 351
+ +AF + +++Q+ V
Sbjct: 281 LRKAFAILEDLQKSEV 296
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 120/243 (49%), Gaps = 23/243 (9%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
L K+ ++ +LF ++ G+FP++ TYN +I+ FC GR S +L ++ P+
Sbjct: 65 LCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPD 124
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
VTF++LI E ++ EA ++ ++ + P TYN++I+G
Sbjct: 125 IVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDG--------------- 169
Query: 147 EMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
F + VD AK + M + +PDVVT++++I G+C A + + EM
Sbjct: 170 --------FCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 221
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+G+ N VT+ ++ C+ G +D A LL+ MI GV P+ ++ ++ G C +
Sbjct: 222 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 281
Query: 267 NRA 269
+A
Sbjct: 282 RKA 284
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 10/239 (4%)
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN----------VVTFNV 220
M + P+VVT+ +++ C EA L+ M+++G QPN VV
Sbjct: 1 MVETGCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTA 60
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
I+D LCK+G A L M + G+ PN YN ++D FC +GR + A +L M
Sbjct: 61 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 120
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
+ ++S LIN + K +++ A +Y EML I P + YN++ + +V+ A
Sbjct: 121 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 180
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
++ D M G + D T+ T I+G CK + +E+F + + Y LI G
Sbjct: 181 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 239
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +F+ L K + ++K + +FP TYN +I+ FCK RV +
Sbjct: 123 PDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRM 182
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + +P+ VTF++LI G C R+ +F ++ G N TY TLI+G +
Sbjct: 183 LDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQ 242
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G +D A++L +M + PD +T+ ++ G C
Sbjct: 243 VGD-----------------------LDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKK 279
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTF 218
+ +A +L ++ V P ++ F
Sbjct: 280 ELRKAFAILEDLQKSEVCPRLIFF 303
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 174/368 (47%), Gaps = 27/368 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++ + G K L + + G D TYN LI+ C++ + + +
Sbjct: 255 PTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYEL 314
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLR-VFGCEPNVFTYNTLINGLY 133
L + + F P+ T+ LI GLC R+ EA L LR C PNV +YNTLI+G
Sbjct: 315 LEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDG-- 372
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
F V+ A +LFL+M +PDVVTY+++IRG C A
Sbjct: 373 ---------------------FSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNA 411
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+EA L EM+ + + P V ++ ++ LC+ G++D AS + D M+ G +PN VY
Sbjct: 412 GRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVY 471
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N+L+ G C TGR+ AK M GC+ +Y LI G C+ + A LY L
Sbjct: 472 NSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLE 531
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
+GI+ N + L + Q +R ++ + G + + Y T I+ LCK + + E
Sbjct: 532 QGIEISETSCNVVIASLRCLEQAQRVLRV---VLATGNSPTAFFYATVIESLCKENNLAE 588
Query: 374 AVELFRTL 381
A +L +
Sbjct: 589 ARQLLEDM 596
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 180/395 (45%), Gaps = 13/395 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ IL L SL++ + GL P + T L+N CK G + +
Sbjct: 123 PDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLE---LA 179
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P A T+T LI GL R+ EA F +++ PN +TY +INGL +
Sbjct: 180 LRYFEKMSSIPCAATWTILIDGLFRAIRVDEACYYFEEMKHTAI-PNNWTYTVVINGLVK 238
Query: 135 TGHTIVALNLFEEM--------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
G A + +EM S G G + KA L MK + D +TY ++
Sbjct: 239 AGKVAEAERVLQEMPVPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTL 298
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DLMIQIG 245
I G C + + A LL EM P++ T+++++ LC+ ++ EA LL L +
Sbjct: 299 IHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDD 358
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
PN YNTL+DGF RVN A +LF+ M + G V +YS LI G C A
Sbjct: 359 CTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAH 418
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
S EM+ K I P V +Y+++ L +++ A +FD M +G + Y + I GL
Sbjct: 419 SYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGL 478
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
CK + +A + + C D Y LI GL
Sbjct: 479 CKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGL 513
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 178/395 (45%), Gaps = 17/395 (4%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++N + L + + LFK L PD TY ILI C G++ +
Sbjct: 90 VHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYE 149
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ P +T L+ LC + A F K+ C T+ LI+GL+R
Sbjct: 150 EMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPC---AATWTILIDGLFRAI 206
Query: 137 HTIVALNLFEEMA----SGNGEFGV--EGFVDKAK----ELFLQMKDENINPDVVTYTSV 186
A FEEM N + V G V K E LQ E P + YTSV
Sbjct: 207 RVDEACYYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEAERVLQ---EMPVPTLANYTSV 263
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G C A D +A LL +M +G Q + +T+N ++ C+ ++D A LL+ M
Sbjct: 264 IGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDF 323
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM-GCTHTVFSYSILINGYCKNKEIEGAL 305
P+ F Y+ L+ G C R++ A++L ++ + CT V SY+ LI+G+ K + A
Sbjct: 324 VPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAY 383
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
L+ EM++ G PDVV Y+TL L + A +EM + Y + I GL
Sbjct: 384 QLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGL 443
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
C+ + A +F ++ C+ ++ YN LI GL
Sbjct: 444 CRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGL 478
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 177/413 (42%), Gaps = 45/413 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+N L +K + LF + + G PD+ TY+ LI C GR S
Sbjct: 361 PNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSY 420
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P ++S+I GLC + A+ +F + GC+PN+ YN+LI GL +
Sbjct: 421 LEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCK 480
Query: 135 TGHTIVALNLFEEMAS-GNGEFGVE-----------GFVDKAKELFLQMKDENI------ 176
TG A +EM G GV D+A +L+++ ++ I
Sbjct: 481 TGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETS 540
Query: 177 --------------------------NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG 210
+P Y +VI C N+ EA+ LL +M+ G
Sbjct: 541 CNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAG 600
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
++P+ T + ++ +C+ K A L+ M+++G +P+ Y+TL++ G+ + A
Sbjct: 601 IKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAH 660
Query: 271 ELFVSMES-MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
+ + S C Y LI Y ++E A ++ E+ SK +V YNTL
Sbjct: 661 VVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKG 720
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
LF ++ ++L EM+R+ + T+ I G C+ AV + ++
Sbjct: 721 LFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEMK 773
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 139/295 (47%), Gaps = 42/295 (14%)
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
HT+ N F E G+ ++A LF + + + PD +TY +IRG C
Sbjct: 88 HTVHTYNCFYEALIRTGQ------CEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKL 141
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI------------ 244
A L EM+D+G++P V+T +++ LCK+G ++ A R + M I
Sbjct: 142 KLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPCAATWTILIDG 201
Query: 245 ---GVR----------------PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
+R PN + Y +++G G+V A+ + M T+
Sbjct: 202 LFRAIRVDEACYYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMP----VPTL 257
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
+Y+ +I G+CK ++ A L +M KG + D + YNTL + +++RA++L +E
Sbjct: 258 ANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEE 317
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL-KCELDIRAYNCLIDG 399
M+ + D +TY I GLC+ + EA +L TLR C ++ +YN LIDG
Sbjct: 318 MKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDG 372
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 100/235 (42%), Gaps = 22/235 (9%)
Query: 45 STGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 104
+TG P + Y +I CK ++ +L ++ + P+ T +L+ +C + + +
Sbjct: 563 ATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAV 622
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKA 164
A A ++ G +P+V TY+TL+N L++ G A + + S F
Sbjct: 623 VAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCF--------- 673
Query: 165 KELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
PD + Y +I + + EA+ +L E+ + ++V +N ++
Sbjct: 674 -------------PDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKG 720
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
L + + LL M + N +N L+ GFC G+ +RA + M+ +
Sbjct: 721 LFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEMKKV 775
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 4/175 (2%)
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 268
Q + V T+N + L + G+ +EA RL + P++ Y L+ G C G++
Sbjct: 84 QDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKL 143
Query: 269 AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFV 328
A L+ M G V + L+N CK+ +E AL + +M S P + L
Sbjct: 144 ACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSS---IPCAATWTILID 200
Query: 329 VLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
LF +V+ A F+EM+ + + WTY I+GL K + EA + + + +
Sbjct: 201 GLFRAIRVDEACYYFEEMKHTAI-PNNWTYTVVINGLVKAGKVAEAERVLQEMPV 254
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 179/386 (46%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L KN+ +D LFK + GL P+ TY ILI+ CK G + +
Sbjct: 336 PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCL 395
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ + SLI G C + + A L + + G P +Y+ LI GL R
Sbjct: 396 FDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCR 455
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G + L EMA + I + T+T++I GFC
Sbjct: 456 NGDLSSCMELHREMA-----------------------ERGIAWNNYTFTALINGFCKDK 492
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+EA L +M+D V PN VTFNV+++ C G + +A +L D M+++G++P+ + Y
Sbjct: 493 KMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYR 552
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L+ G CLT V++A E +E+ FS + L+ G+ + L+ EM +
Sbjct: 553 SLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVR 612
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+K D+V + + + H E++ LF EM+ GV D Y ID L K +++A
Sbjct: 613 GVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQA 672
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ + + + + + LI+ L
Sbjct: 673 LNCWDQMVVDGYSPNTVTHTVLINNL 698
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 174/362 (48%), Gaps = 23/362 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+N+L L KN + + + + G+ D TY L+ FC+M + + ++
Sbjct: 236 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI 295
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
R F P+ + +I L + + EA +L KL G PNVF YN LI+ L +
Sbjct: 296 RLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCK----- 350
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
N F D A LF +M + P+ VTY +I C +A
Sbjct: 351 ------------NERF------DDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDA 392
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
CL +M D+G++ V +N +++ CK G +D A LL M++ G+ P A Y+ L+ G
Sbjct: 393 LCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAG 452
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
C G ++ EL M G ++++ LING+CK+K+++ A L+ +M+ + P+
Sbjct: 453 LCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN 512
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
V +N + + + +AF+L+D+M G+ D +TYR+ I GLC S + +A E
Sbjct: 513 EVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA 572
Query: 380 TL 381
L
Sbjct: 573 DL 574
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 173/356 (48%), Gaps = 13/356 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+F L K+K D LF ++ + + P+ T+N++I +C +G + F + ++
Sbjct: 480 TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQM 539
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ P+ T+ SLI GLC S + +A L N F+ L+ G +R G
Sbjct: 540 VEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRF 599
Query: 139 IVALNLFEEMASGNGEFGVEGFV----------DKAKE--LFLQMKDENINPDVVTYTSV 186
+L++EMA + + F DK K LF +MK++ + PD + YT +
Sbjct: 600 TETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCM 659
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I + +A +M+ G PN VT V+++ LCK+G + A L M+ V
Sbjct: 660 IDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNV 719
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
PN F YN +D F G + +AK+L +M G ++ S++ILI G CK +I+ A+
Sbjct: 720 LPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAID 778
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
L ++ G PD + Y+T+ L ++ + +AF+L++EM G+ D Y FI
Sbjct: 779 LMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 834
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 185/396 (46%), Gaps = 15/396 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S++ L L +N + + L + + G+ + YT+ LIN FCK ++ +
Sbjct: 441 PTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 500
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ S PN VTF +I+G C I +A L+ ++ G +P+ +TY +LI+GL
Sbjct: 501 FDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCL 560
Query: 135 TG-------------HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
T ++ LN F A G F EG + L+ +M + D+V
Sbjct: 561 TSGVSKANEFVADLENSYAVLNNFSLTALLYG-FFREGRFTETYHLWDEMAVRGVKLDLV 619
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
++T ++ +D ++ L EM +QGV+P+ + + ++D L K M +A D M
Sbjct: 620 SFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQM 679
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G PN + L++ C +G + A+ L M + F+Y+ ++ + ++
Sbjct: 680 VVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDM 739
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A L+ ML +G +V +N L L + +++ A L ++ G + D +Y T
Sbjct: 740 EKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTI 798
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
I LCK I +A EL+ + + D+ AYN I
Sbjct: 799 IHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 834
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 138/283 (48%), Gaps = 23/283 (8%)
Query: 117 GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI 176
G N +T + ++ L + +A +LF++M LQ +
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKM--------------------LQ---SGV 194
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
+ D YT+ IR +C + + + A+ L++ M +GV+ + V +NV+M LCKN ++ EA
Sbjct: 195 HLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVE 254
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+ ++M+ IGV + Y TL+ GFC + A + M +G + + S +I+
Sbjct: 255 VKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELR 314
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K + +E A SL ++ G+ P+V YN L L + + + A +LF EM G+ +
Sbjct: 315 KKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEV 374
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
TY I LCK I +A+ LF +R ++ + YN LI+G
Sbjct: 375 TYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLING 417
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 160/374 (42%), Gaps = 53/374 (14%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFG--CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+FD M++ P V +FN++ CL N L+ ++ GL PD YTY LI+
Sbjct: 500 LFDKMIDSNVIPNEV-TFNVMIEGYCLVGNIR--KAFQLYDQMVEMGLKPDNYTYRSLIS 556
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME--------------- 105
C VS + + S N + T+L+ G E R E
Sbjct: 557 GLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKL 616
Query: 106 --------------------AAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
+ LF +++ G +P+ Y +I+ L + + I ALN +
Sbjct: 617 DLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCW 676
Query: 146 EEMA-SGNGEFGV-----------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
++M G V G++ A+ L +M N+ P+ TY + F
Sbjct: 677 DQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATE 736
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
D +AK L M+ QG ++V+FN+++ LCK GK+ EA L+ + + G P+ Y
Sbjct: 737 GDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISY 795
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
+T++ C G +N+A EL+ M G V +Y+I I + E + AL +Y M+
Sbjct: 796 STIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIR 855
Query: 314 KGIKPDVVIYNTLF 327
G++P+ Y L
Sbjct: 856 SGVQPNWDTYRALL 869
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 116/257 (45%), Gaps = 11/257 (4%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ SF I+ K + LF+ + G+ PD Y +I+ K +
Sbjct: 618 LVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWD 677
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+++ ++PN VT T LI LC + A L ++ PN FTYN ++ G
Sbjct: 678 QMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEG 737
Query: 137 HTIVALNLFEEMASGNGEFGVE-----------GFVDKAKELFLQMKDENINPDVVTYTS 185
A +L M G+ V G + +A +L ++ + +PD ++Y++
Sbjct: 738 DMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYST 797
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I C D N+A L EM+ +G++P+VV +N+ + +G+ D+A + MI+ G
Sbjct: 798 IIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSG 857
Query: 246 VRPNAFVYNTLMDGFCL 262
V+PN Y L+ G L
Sbjct: 858 VQPNWDTYRALLSGISL 874
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%)
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+ G+ N T + I+ L K + A L D M+Q GV + +VY + +C + +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ A+ L V MES G + Y++L+ G CKN ++ A+ + M++ G+ D V Y TL
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
+ ++E A ++ +M R G ID L K + EA L L L
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334
Query: 387 ELDIRAYNCLIDGL 400
++ AYN LID L
Sbjct: 335 VPNVFAYNALIDKL 348
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 187/393 (47%), Gaps = 36/393 (9%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
RP+ P + +N L L + V+ ++ + G+ P+++TYN+L+ C+ RV
Sbjct: 124 RPTEPRL--YNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGA 181
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+L + R P+ VT+ +++ LC R+ EA + + P +YN ++
Sbjct: 182 ARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM-----PPVAASYNAIVL 236
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKD---ENINPDVVTYTSVI 187
L R EF + +E+F + D + P+V+TYT+++
Sbjct: 237 ALCR-------------------EF-------RMQEVFSVVSDMVGRGLQPNVITYTTIV 270
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
FC A + A +L M+ G PNVVTF ++ L +G++ +A + M+ G
Sbjct: 271 DAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWA 330
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P+ YN L+ G C G + A + SME GC V +YS LI+G+ K ++ GA+S+
Sbjct: 331 PSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISI 390
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
+ +M G KP+VV+Y + V + +A L D+M + +T T+ T I LC
Sbjct: 391 WNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCD 450
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ A+ +F +R C + R YN LI GL
Sbjct: 451 CRRVGRALGVFHEMRRHGCVPNGRTYNELIHGL 483
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 174/387 (44%), Gaps = 23/387 (5%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP S+N + L + V S+ + GL P++ TY +++ FCK G +
Sbjct: 225 PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACA 284
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L R++ + TPN VTFT+L++GL + R+ +A ++ + G P+ +YN LI GL
Sbjct: 285 ILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLC 344
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
G + A + M+ P+V TY+++I GF A
Sbjct: 345 SVGD-----------------------LKGASSILNSMEQHGCFPNVRTYSTLIDGFSKA 381
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
D A + +M G +PNVV + ++D CK ++A L+D M+ PN +
Sbjct: 382 GDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTF 441
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
NTL+ C RV RA +F M GC +Y+ LI+G + AL + EM S
Sbjct: 442 NTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQS 501
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
GI+ +V YNT+ L + A +M G+ + +T+ I CK +
Sbjct: 502 HGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRM 561
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A + + ++ C +I Y L+ L
Sbjct: 562 AAWMLGAMNVVNCHRNILVYTILMAEL 588
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 184/394 (46%), Gaps = 30/394 (7%)
Query: 9 NMRPS--PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
NMR P V ++N+L L +N + + G PD TY +++ CK+
Sbjct: 153 NMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLD 212
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
R+ VL + P A ++ +++ LC E R+ E ++ + + G +PNV TY
Sbjct: 213 RLDEATEVL-----AAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYT 267
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
T+++ + G +A + M + G P+VVT+T++
Sbjct: 268 TIVDAFCKAGELRMACAILARMV-------ITG----------------CTPNVVTFTAL 304
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
+RG ++A + M+ +G P+ V++N+++ LC G + AS +L+ M Q G
Sbjct: 305 VRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGC 364
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
PN Y+TL+DGF G + A ++ M GC V Y+ +++ +CK A S
Sbjct: 365 FPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKS 424
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L +ML + P+ V +NTL L + +V RA +F EM+R G + TY I GL
Sbjct: 425 LIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLF 484
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +A+ + ++ EL + YN ++ GL
Sbjct: 485 REGNCGDALHMVTEMQSHGIELSLVTYNTVVSGL 518
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 96/252 (38%), Gaps = 33/252 (13%)
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+ + +R A D + + L EM +GV + + G D A +
Sbjct: 57 AHEAAVRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRA 116
Query: 242 IQ-IG-VRPN-AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
+ +G RP +YN L+D V ++ +M G VF+Y++L+ C+N
Sbjct: 117 VHDLGCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQN 176
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA------------------- 339
+ A + EM KG PD V Y T+ VL ++ +++ A
Sbjct: 177 NRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVL 236
Query: 340 -----------FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCEL 388
F + +M G+ + TY T +D CK + A + + I C
Sbjct: 237 ALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTP 296
Query: 389 DIRAYNCLIDGL 400
++ + L+ GL
Sbjct: 297 NVVTFTALVRGL 308
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 185/395 (46%), Gaps = 14/395 (3%)
Query: 18 CSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGR 77
CSF + L K + + SL +L G+ P+++ YN LI+ CK R +
Sbjct: 306 CSF--MIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKE 363
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
+ PN VT+ LI LC I +A LF K+R G + V+ YN+LING + G
Sbjct: 364 MAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGS 423
Query: 138 TIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
A L M G + EL +M + I + T+T+
Sbjct: 424 LDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTA 483
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I GFC +EA L +M+D V PN VTFNV+++ C G + +A +L D M+++G
Sbjct: 484 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG 543
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
++P+ + Y +L+ G CLT V++A E +E+ FS + L+ G+ +
Sbjct: 544 LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETY 603
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
L+ EM +G+K D+V + + + H E++ LF EM+ GV D Y ID L
Sbjct: 604 HLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDAL 663
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
K +++A+ + + + + + LI+ L
Sbjct: 664 SKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNL 698
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 174/362 (48%), Gaps = 23/362 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+N+L L KN + + + + G+ D TY L+ FC+M + + ++
Sbjct: 236 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI 295
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
R F P+ + +I L + + EA +L KL G PNVF YN LI+ L +
Sbjct: 296 RLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCK----- 350
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
N F D A LF +M + P+ VTY +I C +A
Sbjct: 351 ------------NERF------DDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDA 392
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
CL +M D+G++ V +N +++ CK G +D A LL M++ G+ P A Y+ L+ G
Sbjct: 393 LCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAG 452
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
C G ++ EL M G ++++ LING+CK+K+++ A L+ +M+ + P+
Sbjct: 453 LCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN 512
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
V +N + + + +AF+L+D+M G+ D +TYR+ I GLC S + +A E
Sbjct: 513 EVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA 572
Query: 380 TL 381
L
Sbjct: 573 DL 574
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 173/356 (48%), Gaps = 13/356 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+F L K+K D LF ++ + + P+ T+N++I +C +G + F + ++
Sbjct: 480 TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQM 539
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ P+ T+ SLI GLC S + +A L N F+ L+ G +R G
Sbjct: 540 VEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRF 599
Query: 139 IVALNLFEEMASGNGEFGVEGFV----------DKAKE--LFLQMKDENINPDVVTYTSV 186
+L++EMA + + F DK K LF +MK++ + PD + YT +
Sbjct: 600 TETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCM 659
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I + +A +M+ G PN VT V+++ LCK+G + A L M+ V
Sbjct: 660 IDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNV 719
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
PN F YN +D F G + +AK+L +M G ++ S++ILI G CK +I+ A+
Sbjct: 720 LPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAID 778
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
L ++ G PD + Y+T+ L ++ + +AF+L++EM G+ D Y FI
Sbjct: 779 LMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 834
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 185/396 (46%), Gaps = 15/396 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S++ L L +N + + L + + G+ + YT+ LIN FCK ++ +
Sbjct: 441 PTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 500
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ S PN VTF +I+G C I +A L+ ++ G +P+ +TY +LI+GL
Sbjct: 501 FDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCL 560
Query: 135 TG-------------HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
T ++ LN F A G F EG + L+ +M + D+V
Sbjct: 561 TSGVSKANEFVADLENSYAVLNNFSLTALLYG-FFREGRFTETYHLWDEMAVRGVKLDLV 619
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
++T ++ +D ++ L EM +QGV+P+ + + ++D L K M +A D M
Sbjct: 620 SFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQM 679
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G PN + L++ C +G + A+ L M + F+Y+ ++ + ++
Sbjct: 680 VVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDM 739
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A L+ ML +G +V +N L L + +++ A L ++ G + D +Y T
Sbjct: 740 EKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTI 798
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
I LCK I +A EL+ + + D+ AYN I
Sbjct: 799 IHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 834
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 138/283 (48%), Gaps = 23/283 (8%)
Query: 117 GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI 176
G N +T + ++ L + +A +LF++M LQ +
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKM--------------------LQ---SGV 194
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
+ D YT+ IR +C + + + A+ L++ M +GV+ + V +NV+M LCKN ++ EA
Sbjct: 195 HLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVE 254
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+ ++M+ IGV + Y TL+ GFC + A + M +G + + S +I+
Sbjct: 255 VKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELR 314
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K + +E A SL ++ G+ P+V YN L L + + + A +LF EM G+ +
Sbjct: 315 KKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEV 374
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
TY I LCK I +A+ LF +R ++ + YN LI+G
Sbjct: 375 TYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLING 417
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 160/374 (42%), Gaps = 53/374 (14%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFG--CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+FD M++ P V +FN++ CL N L+ ++ GL PD YTY LI+
Sbjct: 500 LFDKMIDSNVIPNEV-TFNVMIEGYCLVGN--IRKAFQLYDQMVEMGLKPDNYTYRSLIS 556
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME--------------- 105
C VS + + S N + T+L+ G E R E
Sbjct: 557 GLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKL 616
Query: 106 --------------------AAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
+ LF +++ G +P+ Y +I+ L + + I ALN +
Sbjct: 617 DLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCW 676
Query: 146 EEMA----SGN--------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
++M S N G++ A+ L +M N+ P+ TY + F
Sbjct: 677 DQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATE 736
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
D +AK L M+ QG ++V+FN+++ LCK GK+ EA L+ + + G P+ Y
Sbjct: 737 GDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISY 795
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
+T++ C G +N+A EL+ M G V +Y+I I + E + AL +Y M+
Sbjct: 796 STIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIR 855
Query: 314 KGIKPDVVIYNTLF 327
G++P+ Y L
Sbjct: 856 SGVQPNWDTYRALL 869
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 137/315 (43%), Gaps = 22/315 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ SF I+ K + LF+ + G+ PD Y +I+ K +
Sbjct: 618 LVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWD 677
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+++ ++PN VT T LI LC + A L ++ PN FTYN ++ G
Sbjct: 678 QMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEG 737
Query: 137 HTIVALNLFEEMASGNGEFGVE-----------GFVDKAKELFLQMKDENINPDVVTYTS 185
A +L M G+ V G + +A +L ++ + +PD ++Y++
Sbjct: 738 DMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYST 797
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I C D N+A L EM+ +G++P+VV +N+ + +G+ D+A + MI+ G
Sbjct: 798 IIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSG 857
Query: 246 VRPNAFVYNTLMDGFCLTGRVN----RAKELFVSM---ESMGCTHTVFSYSILINGYCKN 298
V+PN Y L+ G L + R + ++ + E M TH I K+
Sbjct: 858 VQPNWDTYRALLSGISLMLHYDFSCFRGTKQYIQISVYELMDSTHNKSHRRIWFVDDHKS 917
Query: 299 KEI----EGALSLYG 309
EI +G L+ +G
Sbjct: 918 GEIILEFDGRLNKWG 932
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%)
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+ G+ N T + I+ L K + A L D M+Q GV + +VY + +C + +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ A+ L V MES G + Y++L+ G CKN ++ A+ + M++ G+ D V Y TL
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
+ ++E A ++ +M R G ID L K + EA L L L
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334
Query: 387 ELDIRAYNCLIDGL 400
++ AYN LID L
Sbjct: 335 VPNVFAYNALIDKL 348
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 178/386 (46%), Gaps = 22/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +L A+ D+ + ++ G+ + YN L+N K V ++
Sbjct: 142 PDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLL 201
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L F P+ +F LI+GLC I +A F + FGC P++ +YNTLING R
Sbjct: 202 FREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCR 261
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
E++ G+ D KE M + ++PDV+TYTS+I G+C
Sbjct: 262 VN----------EISKGH---------DLLKE---DMLIKGVSPDVITYTSIISGYCKLG 299
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
D A L EM+ G++PN TFNV++D K G M A + + M+ +G P+ +
Sbjct: 300 DMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFT 359
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L+DG+C G VN+ +L+ M+ + V++Y++LIN CK I A + + S
Sbjct: 360 SLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSS 419
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
+ P IYN + + +V+ A + EMQ D T+ I G C +VEA
Sbjct: 420 EVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEA 479
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ F + + C D N LI L
Sbjct: 480 ISTFYKMIEINCVPDEITINSLISCL 505
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 168/332 (50%), Gaps = 30/332 (9%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V SFNIL L + D F+ + + G FPD+ +YN LIN FC++ +S G +
Sbjct: 212 PDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDL 271
Query: 75 LGR-ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
L +L +P+ +T+TS+I G C + A+ LF ++ G +PN FT+N LI+G
Sbjct: 272 LKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFG 331
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ G+ A+ ++E+M L L PDVVT+TS+I G+C
Sbjct: 332 KVGNMRSAMVMYEKM------------------LLL-----GCLPDVVTFTSLIDGYCRE 368
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+ N+ L EM + + PNV T+ V+++ LCK ++ EA L + V P F+Y
Sbjct: 369 GEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIY 428
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N ++DGFC G+V+ A + M+ C +++ILI G C + A+S + +M+
Sbjct: 429 NPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIE 488
Query: 314 KGIKPDVVIYNTLFVVLF------EIHQVERA 339
PD + N+L L E Q+++A
Sbjct: 489 INCVPDEITINSLISCLLKAGMPNEASQIKQA 520
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 183/408 (44%), Gaps = 27/408 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLY--------------TYNILINCFCK 64
S N FG L++N + + KR + L + TY++L+ CK
Sbjct: 62 SLNACFGYLSRNLNPSIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCK 121
Query: 65 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFT 124
+G +V + P++ L+ ++ A ++ +G + + F
Sbjct: 122 VGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFV 181
Query: 125 YNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMK 172
YN L+N L + A+ LF E V F +DKA E F M
Sbjct: 182 YNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMG 241
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEAKCLLIE-MMDQGVQPNVVTFNVIMDELCKNGKM 231
+ PD+V+Y ++I GFC N+ ++ LL E M+ +GV P+V+T+ I+ CK G M
Sbjct: 242 NFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDM 301
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
AS L D M+ G++PN F +N L+DGF G + A ++ M +GC V +++ L
Sbjct: 302 KAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSL 361
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I+GYC+ E+ L L+ EM + + P+V Y L L + +++ A ++ V
Sbjct: 362 IDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEV 421
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ Y IDG CK + EA + ++ KC D + LI G
Sbjct: 422 VPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIG 469
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 114/241 (47%), Gaps = 12/241 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + K LF + S+G+ P+ +T+N+LI+ F K+G + V+
Sbjct: 283 PDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVM 342
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++L P+ VTFTSLI G C E + + L+ +++V PNV+TY LIN L +
Sbjct: 343 YEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCK 402
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
A N + S F G VD+A + +M+++ PD +T
Sbjct: 403 ENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKIT 462
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+T +I G C EA +M++ P+ +T N ++ L K G +EAS++ +
Sbjct: 463 FTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAAL 522
Query: 243 Q 243
Q
Sbjct: 523 Q 523
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 65/129 (50%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ +R P V ++ +L L K + + L S+ + P + YN +I+ FCK G+
Sbjct: 381 MKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGK 440
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V ++ + P+ +TFT LI G C + R++EA + F K+ C P+ T N+
Sbjct: 441 VDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINS 500
Query: 128 LINGLYRTG 136
LI+ L + G
Sbjct: 501 LISCLLKAG 509
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 188/386 (48%), Gaps = 28/386 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N++ L + + +L+ + S GL P+++TYN+L+ C+ G+V +
Sbjct: 142 PSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKL 201
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P+ V++T++I +C + +A L K EP V YN LI+G+ +
Sbjct: 202 LVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKF-----EPVVPVYNALIHGVCK 256
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
A +L EM D ++P+V++Y++VI
Sbjct: 257 ECRFKEAFDLMNEMV-----------------------DRGVDPNVISYSTVISCLSDMG 293
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ + + M +G +PNV TF ++ G++ +A L +LMI+ GV PN YN
Sbjct: 294 NVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYN 353
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+ G C G ++ A ++ ME V +YS +I G+ K+ ++ A + +M++
Sbjct: 354 TLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINC 413
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G +P+VV+Y + VL ++ ++AF L D M DG T+ FI GLC+ + A
Sbjct: 414 GCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWA 473
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ + + +C +IR YN L+DGL
Sbjct: 474 MNVLDQMEKYECLPNIRTYNELLDGL 499
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 184/385 (47%), Gaps = 28/385 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N+L L +N D L +++ G PD +Y +I+ CK+G V
Sbjct: 177 PNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKA--- 233
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R L F P + +LI G+C E R EA L ++ G +PNV +Y+T+I+ L
Sbjct: 234 --RELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSD 291
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G+ ++L +F M FV + P+V T+TS+I+GF
Sbjct: 292 MGNVELSLAVFGRM-----------FVRGCR------------PNVQTFTSLIKGFFVRG 328
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+A L M+ +GV PNVV +N ++ LC +G MDEA + + M + +RPN Y+
Sbjct: 329 RVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYS 388
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
T++ GF +G + A E + M + GC V Y+ +++ C+ + A L M+S
Sbjct: 389 TIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISD 448
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G P V+ +N L +VE A + D+M++ + TY +DGL + + EA
Sbjct: 449 GCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREA 508
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
L R L K E D YN ++ G
Sbjct: 509 CGLIRELEERKVEFDCVTYNTIMYG 533
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 180/398 (45%), Gaps = 13/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N L + K + L + G+ P++ +Y+ +I+C MG V V
Sbjct: 242 PVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAV 301
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
GR+ PN TFTSLIKG R+ +A L+ + G PNV YNTLI+GL
Sbjct: 302 FGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCS 361
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
G+ A++++ +M + F G + A E + +M + P+VV
Sbjct: 362 DGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVV 421
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT ++ C + +++A L+ M+ G P V+TFN + LC+ G+++ A +LD M
Sbjct: 422 YTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQME 481
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ PN YN L+DG A L +E +Y+ ++ G+ N +
Sbjct: 482 KYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQ 541
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG-VAADTWTYRTF 361
L L G+ML GIK D + NT ++ +V+ A K+ D + + AD T+
Sbjct: 542 QVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTII 601
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ G+C EAV + +I +N L+ G
Sbjct: 602 LWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRG 639
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 141/344 (40%), Gaps = 54/344 (15%)
Query: 88 VTFTSLIKGLCAESRIMEAAALFTKLRVFGC-EPNVFTYNTLINGLYRTGHTIVALNLFE 146
V+ + ++K L E I+ + F L G + TY T+I+ L R
Sbjct: 39 VSESHVVKVLRQEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNE--------- 89
Query: 147 EMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
+D L QMK EN+ + VI+ + +N + + +
Sbjct: 90 --------------MDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRI 135
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+ G +P+V +N+++D L + L + M G+ PN F YN L+ C G+V
Sbjct: 136 REFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKV 195
Query: 267 NRAKELFVSMESMGCT------HTVFS------------------------YSILINGYC 296
+ A +L V M + GC TV S Y+ LI+G C
Sbjct: 196 DGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFEPVVPVYNALIHGVC 255
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K + A L EM+ +G+ P+V+ Y+T+ L ++ VE + +F M G +
Sbjct: 256 KECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQ 315
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
T+ + I G + +AV L+ + ++ AYN LI GL
Sbjct: 316 TFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGL 359
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 125/295 (42%), Gaps = 50/295 (16%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L + + D +S++ ++ + P++ TY+ +I F K G +
Sbjct: 347 PNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACET 406
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ PN V +T ++ LC S +A L + GC P V T+N I GL R
Sbjct: 407 WNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCR 466
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G A+N+ ++M +G F F +A L ++++ + D V
Sbjct: 467 AGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAF-REACGLIRELEERKVEFDCV 525
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD-- 239
TY +++ GF + + LL +M+ G++ + +T N ++ CK GK+ A ++LD
Sbjct: 526 TYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNI 585
Query: 240 ----------------------------------LMIQIGVRPNAFVYNTLMDGF 260
M++ G+ PN +N L+ GF
Sbjct: 586 SAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGF 640
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N + + N + VL L ++ G+ D T N +N +CK+G+V VL I
Sbjct: 526 TYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNI 585
Query: 79 -LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY-RTG 136
F + +T T ++ G+C EA ++ G PN+ T+N L+ G + + G
Sbjct: 586 SAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFFSKLG 645
Query: 137 H 137
H
Sbjct: 646 H 646
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 190/432 (43%), Gaps = 47/432 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG-------- 66
P + +N L K ++ LFK+L G P L T+ L+N FCKMG
Sbjct: 241 PNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLL 300
Query: 67 ----------------------RVSHGFVV-----LGRILRSCFTPNAVTFTSLIKGLCA 99
R GF + L + +C P+ VT+ +LI C+
Sbjct: 301 LLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCS 360
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE----- 154
+ EA L + G PN TY L++G + G A + EM++ E
Sbjct: 361 RGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMIS 420
Query: 155 FG-------VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
+G V G VD A + +M + I PD Y ++ G + AK +L EM+
Sbjct: 421 YGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEML 480
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
DQ + P+ + ++D ++G +DEA +L L+I+ G+ P YN ++ GF +G ++
Sbjct: 481 DQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMD 540
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A M +F++S +I+GY K + L ++G M+ + KP+VV Y +L
Sbjct: 541 NAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLI 600
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
+ + A KLF M+ G+ TY I CK + + +AV F + I KC
Sbjct: 601 NGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCT 660
Query: 388 LDIRAYNCLIDG 399
+ A++ L++G
Sbjct: 661 PNDAAFHYLVNG 672
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 179/365 (49%), Gaps = 12/365 (3%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G P++ YN LI+ +CK G V + + ++ F P TF SL+ G C
Sbjct: 238 GCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAI 297
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE------------ 154
L +++ G NV YN +I+ Y+ G I A + +EM+ E
Sbjct: 298 DLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINH 357
Query: 155 FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
F G V++A++L Q + P+ +TYT ++ G+C ++ +A LIEM G++ +
Sbjct: 358 FCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVD 417
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
++++ ++ L G++D A + D M+ G+ P+A +YN LM+G G+++ AK +
Sbjct: 418 MISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLT 477
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
M F Y+ L++G+ ++ ++ A L+ ++ KG+ P VV YN + +
Sbjct: 478 EMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSG 537
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
++ A D+M+R D +T+ T IDG K + +++F + C+ ++ Y
Sbjct: 538 MMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYT 597
Query: 395 CLIDG 399
LI+G
Sbjct: 598 SLING 602
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 175/368 (47%), Gaps = 18/368 (4%)
Query: 49 FPDLYTYNILINCFCKMGRVSHGFVVLGRILR----SCFTPNAVTFTSLIKGLCAESRIM 104
P Y N L+N K R+ + ++ + T + ++KGLC + RI
Sbjct: 166 LPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIE 225
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG------------- 151
+ L GC PN+ YNTLI+G + G A LF+++
Sbjct: 226 DGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLV 285
Query: 152 NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
NG F G + L L+MKD ++ +V Y ++I +AK L EM +
Sbjct: 286 NG-FCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCC 344
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
+P++VT+N +++ C G+++EA +LL+ I+ G+ PN Y L+ G+C G +A +
Sbjct: 345 EPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATD 404
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
+ M + G + SY LI+G E++ AL++ M+++GI PD IYN L LF
Sbjct: 405 YLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLF 464
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIR 391
+ ++ A + EM +A D + Y T +DG ++ + EA +LF+ + + +
Sbjct: 465 KKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVV 524
Query: 392 AYNCLIDG 399
YN +I G
Sbjct: 525 GYNVMIKG 532
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 181/413 (43%), Gaps = 63/413 (15%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
PDL TYN LIN FC G V +L + +R PN +T+T L+ G C + +A
Sbjct: 346 PDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDY 405
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG-------------NGEFG 156
++ G E ++ +Y LI+GL G AL + + M + NG F
Sbjct: 406 LIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFK 465
Query: 157 VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
+G + AK + +M D+NI PD Y +++ GF + +EAK L ++++G+ P VV
Sbjct: 466 -KGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVV 524
Query: 217 TFNVIMDELCKNGKMDEA-------------------SRLLD----------------LM 241
+NV++ K+G MD A S ++D LM
Sbjct: 525 GYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLM 584
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++ +PN Y +L++G+C G A++LF M S G +V +YSILI +CK ++
Sbjct: 585 VKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKL 644
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLF---------VVLFE---IHQVERAF--KLFDEMQ 347
A+S + ML P+ ++ L V E +H+ R+ F M
Sbjct: 645 GKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMI 704
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
DG Y + LC+ + A++L + D ++ LI G+
Sbjct: 705 GDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGI 757
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 112/244 (45%), Gaps = 4/244 (1%)
Query: 161 VDKAKELFLQMKDENINPDV----VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
++ A +L+ +M D + D+ T + +++G C + L+ +G PN+V
Sbjct: 185 IETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIV 244
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
+N ++D CK G+++ A +L + G P + +L++GFC G L + M
Sbjct: 245 FYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEM 304
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
+ G + V Y+ +I+ K A EM +PD+V YNTL +V
Sbjct: 305 KDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEV 364
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
E A KL ++ R G+A + TY + G CK +A + + E+D+ +Y L
Sbjct: 365 EEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGAL 424
Query: 397 IDGL 400
I GL
Sbjct: 425 IHGL 428
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 135/336 (40%), Gaps = 26/336 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + L ++ + D LF+ + GL P + YN++I F K G + + +
Sbjct: 486 PDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILC 545
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ ++ R+ P+ TF+++I G + + +F + C+PNV TY +LING R
Sbjct: 546 IDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCR 605
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G T +A LF M S G F E + KA F M P+
Sbjct: 606 KGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAA 665
Query: 183 YTSVIRGFC---------YANDWNEAKCLLIE-----MMDQGVQPNVVTFNVIMDELCKN 228
+ ++ GF N+ +E + E M+ G +N I+ LC+
Sbjct: 666 FHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQ 725
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
+ A +L + M+ G+ +A + L+ G CL G + + + G Y
Sbjct: 726 RMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQIALKY 785
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
S+ ++ + I A + M+ + P+ + N
Sbjct: 786 SLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNN 821
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 178/386 (46%), Gaps = 22/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +L A+ D+ + ++ G+ + YN L+N K V ++
Sbjct: 142 PDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLL 201
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L F P+ +F LI+GLC I +A F + FGC P++ +YNTLING R
Sbjct: 202 FREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCR 261
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
E++ G+ D KE M + ++PDV+TYTS+I G+C
Sbjct: 262 VN----------EISKGH---------DLLKE---DMLIKGVSPDVITYTSIISGYCKLG 299
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
D A L EM+ G++PN TFNV++D K G M A + + M+ +G P+ +
Sbjct: 300 DMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFT 359
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L+DG+C G VN+ +L+ M+ + V++Y++LIN CK I A + + S
Sbjct: 360 SLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSS 419
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
+ P IYN + + +V+ A + EMQ D T+ I G C +VEA
Sbjct: 420 EVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEA 479
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ F + + C D N LI L
Sbjct: 480 ISTFYKMIEINCVPDEITINSLISCL 505
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 168/332 (50%), Gaps = 30/332 (9%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V SFNIL L + D F+ + + G FPD+ +YN LIN FC++ +S G +
Sbjct: 212 PDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDL 271
Query: 75 LGR-ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
L +L +P+ +T+TS+I G C + A+ LF ++ G +PN FT+N LI+G
Sbjct: 272 LKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFG 331
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ G+ A+ ++E+M L L PDVVT+TS+I G+C
Sbjct: 332 KVGNMRSAMVMYEKM------------------LLL-----GCLPDVVTFTSLIDGYCRE 368
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+ N+ L EM + + PNV T+ V+++ LCK ++ EA L + V P F+Y
Sbjct: 369 GEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIY 428
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N ++DGFC G+V+ A + M+ C +++ILI G C + A+S + +M+
Sbjct: 429 NPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIE 488
Query: 314 KGIKPDVVIYNTLFVVLF------EIHQVERA 339
PD + N+L L E Q+++A
Sbjct: 489 INCVPDEITINSLISCLLKAGMPNEASQIKQA 520
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 183/408 (44%), Gaps = 27/408 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLY--------------TYNILINCFCK 64
S N FG L++N + + KR + L + TY++L+ CK
Sbjct: 62 SLNACFGYLSRNLNPSIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCK 121
Query: 65 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFT 124
+G +V + P++ L+ ++ A ++ +G + + F
Sbjct: 122 VGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFV 181
Query: 125 YNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMK 172
YN L+N L + A+ LF E V F +DKA E F M
Sbjct: 182 YNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMG 241
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEAKCLLIE-MMDQGVQPNVVTFNVIMDELCKNGKM 231
+ PD+V+Y ++I GFC N+ ++ LL E M+ +GV P+V+T+ I+ CK G M
Sbjct: 242 NFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDM 301
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
AS L D M+ G++PN F +N L+DGF G + A ++ M +GC V +++ L
Sbjct: 302 KAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSL 361
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I+GYC+ E+ L L+ EM + + P+V Y L L + +++ A ++ V
Sbjct: 362 IDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEV 421
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ Y IDG CK + EA + ++ KC D + LI G
Sbjct: 422 VPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIG 469
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 114/241 (47%), Gaps = 12/241 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + K LF + S+G+ P+ +T+N+LI+ F K+G + V+
Sbjct: 283 PDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVM 342
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++L P+ VTFTSLI G C E + + L+ +++V PNV+TY LIN L +
Sbjct: 343 YEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCK 402
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
A N + S F G VD+A + +M+++ PD +T
Sbjct: 403 ENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKIT 462
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+T +I G C EA +M++ P+ +T N ++ L K G +EAS++ +
Sbjct: 463 FTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAAL 522
Query: 243 Q 243
Q
Sbjct: 523 Q 523
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 65/129 (50%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ +R P V ++ +L L K + + L S+ + P + YN +I+ FCK G+
Sbjct: 381 MKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGK 440
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V ++ + P+ +TFT LI G C + R++EA + F K+ C P+ T N+
Sbjct: 441 VDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINS 500
Query: 128 LINGLYRTG 136
LI+ L + G
Sbjct: 501 LISCLLKAG 509
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 165/351 (47%), Gaps = 23/351 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ IL L+ V S+F + + D+Y Y+ +IN +C+ G V V
Sbjct: 201 PTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEV 260
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + PN T+ +LI G C +I A L T +++ G N +NT+I+G R
Sbjct: 261 FDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCR 320
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G VDKA E+ M+ I DV TY ++ G C N
Sbjct: 321 -----------------------HGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVN 357
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+AK LL M + GV+ N V++ ++ K G M EA RL M G RP+ YN
Sbjct: 358 RMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYN 417
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
++DG+ +G + A+ ME G V++Y+ L++G+C N +++ AL L+ EM +
Sbjct: 418 VMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQR 477
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
G KP+VV Y L L + + E AF+ +D M G+ D Y + L
Sbjct: 478 GAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSL 528
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 171/359 (47%), Gaps = 12/359 (3%)
Query: 54 TYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL 113
+ +++++ FCK GR+ +L + R NA + L+ + A + ++
Sbjct: 135 SASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEM 194
Query: 114 RVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFV 161
G EP V TY L++GL G ++F+E+ N V G V
Sbjct: 195 ESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNV 254
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
+A E+F + I P+ TY ++I GFC A+ LL +M +GV N + FN +
Sbjct: 255 RRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTM 314
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
+D C++G +D+A + +M ++G++ + + YNTL G C R+ AK+L M G
Sbjct: 315 IDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGV 374
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
SY+ LI+ + K ++ A L+ +M KG +P VV YN + + + A +
Sbjct: 375 ESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAER 434
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
EM++ G+ D +TY + G C N + A+ LF ++ + ++ AY LI GL
Sbjct: 435 FKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGL 493
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 125/273 (45%), Gaps = 12/273 (4%)
Query: 39 LFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 98
+F G+ P+ TY LIN FCK+G++ ++L + N + F ++I G C
Sbjct: 260 VFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYC 319
Query: 99 AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE---- 154
+ +A + + G + +V+TYNTL GL R A L M E
Sbjct: 320 RHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYV 379
Query: 155 --------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
EG + +A+ LF M+ + P VVTY +I G+ + EA+ EM
Sbjct: 380 SYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEM 439
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+G+ P+V T+ ++ C NGK+D A RL + M Q G +PN Y L+ G GR
Sbjct: 440 EKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRS 499
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
A + + +M + G T YS+L+ +K
Sbjct: 500 EEAFQFYDNMLAAGLTPDDTLYSMLVGSLHTDK 532
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 12/226 (5%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FN + ++ D L + + G+ D+YTYN L C++ R+ +L +
Sbjct: 311 FNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMT 370
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+ N V++T+LI E ++EA LF + G P+V TYN +I+G ++G
Sbjct: 371 ENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIR 430
Query: 140 VALNLFEEM------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
A +EM A+ V G VD A LF +MK P+VV YT++I
Sbjct: 431 EAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALI 490
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
G EA M+ G+ P+ +++++ L + + DE
Sbjct: 491 SGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSLHTDKRKDE 536
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
S P V ++N++ K+ K + GL PD+YTY L++ C G+V
Sbjct: 409 SRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVAL 468
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+ + + PN V +T+LI GL E R EA + + G P+ Y+ L+ L
Sbjct: 469 RLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSL 528
Query: 133 Y 133
+
Sbjct: 529 H 529
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
GC T S S++++G+CK ++ A L EM G+K + YN L R
Sbjct: 129 GCI-TPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARV 187
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
++ EM+ GV TY +DGL I + +F ++ D+ Y+ +I+
Sbjct: 188 AEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINA 247
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 176/377 (46%), Gaps = 13/377 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + N L K + L +R+ G+ PD+ +YN LI +C + R+ +
Sbjct: 265 PDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALEL 324
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPNVFTYNTLINGLY 133
+ + P+ V++ +++ LC + ++ E L + + P+ TYNTLI L
Sbjct: 325 IAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALS 384
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVV 181
+ GH AL E G+ +DKAK L + M + NPDVV
Sbjct: 385 KHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVV 444
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT++I GFC +EAK +L +M G +PN VT+ V+++ LC NGK EA ++++
Sbjct: 445 TYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVS 504
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ PNA Y+ +M G G+++ A +L M G ++LI C+N+ +
Sbjct: 505 EEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNV 564
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
GA E L KG +VV + ++ +I ++ A + ++M D TY T
Sbjct: 565 VGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTL 624
Query: 362 IDGLCKNSYIVEAVELF 378
D L K S + EA EL
Sbjct: 625 FDALGKKSRLDEASELI 641
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 164/369 (44%), Gaps = 24/369 (6%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINCFCKMGRVSHGF 72
PP S+ + L K++ + V L + + ++ L PD TYN LI K G
Sbjct: 334 PPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDAL 393
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
V L F + V +++++ C I +A +L + GC P+V TY +I+G
Sbjct: 394 VFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGF 453
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
R G +D+AK++ QM P+ VTYT ++ G C+
Sbjct: 454 CRVGK-----------------------IDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCH 490
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
EA+ ++ + PN +T++ +M L + GK+ EA L MI+ G PN
Sbjct: 491 NGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVD 550
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
N L+ C V AK+ GC V +++ +I G+C+ +++ ALS+ +M
Sbjct: 551 INLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMY 610
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
PD + Y TLF L + +++ A +L +M G+ TYR I C+ +
Sbjct: 611 LSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVD 670
Query: 373 EAVELFRTL 381
+ ++L +
Sbjct: 671 DMMKLLEKM 679
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 173/383 (45%), Gaps = 22/383 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L L+K+ H D L + G D Y+ +++ FCK + +
Sbjct: 371 PDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSL 430
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + P+ VT+T++I G C +I EA + ++ GC+PN TY L+NGL
Sbjct: 431 VIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCH 490
Query: 135 TGHTIVA---LNLFEEM----------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G ++ A +N+ EE A +G EG + +A +L +M ++ P+ V
Sbjct: 491 NGKSLEAREMINVSEEHWWTPNAITYSAVMHG-LRREGKLSEACDLTREMIEKGFLPNPV 549
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+I+ C + AK L E + +G NVV F ++ C+ G +D A +L+ M
Sbjct: 550 DINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDM 609
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
P+A Y TL D R++ A EL V M G T +Y +I+ +C+ +
Sbjct: 610 YLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRV 669
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT- 360
+ + L +M+++ +P +YN + L E A KL ++ R D T
Sbjct: 670 DDMMKLLEKMIAR--QPFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHIL 727
Query: 361 ----FIDGLCKNSYIVEAVELFR 379
IDG ++Y V A ++FR
Sbjct: 728 IESYLIDGNALSAYKV-ACQMFR 749
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 171/399 (42%), Gaps = 50/399 (12%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
P+ ++Y ++ + + G + + +L + ++ P+ + I L +++ +A
Sbjct: 232 PEAFSYVMV--SYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRF 289
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM------ASGNGEFGVEGF--- 160
+++V G EP++ +YN LI G AL L EM + V F
Sbjct: 290 LERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCK 349
Query: 161 ---VDKAKELFLQM-KDENINPDVVT---------------------------------- 182
V++ K L M ++ N+ PD VT
Sbjct: 350 DRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKV 409
Query: 183 -YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y++V+ FC + ++AK L+I+M +G P+VVT+ I+D C+ GK+DEA ++L M
Sbjct: 410 GYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQM 469
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G +PN Y L++G C G+ A+E+ E T +YS +++G + ++
Sbjct: 470 YKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKL 529
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A L EM+ KG P+ V N L L V A K +E G A + + +
Sbjct: 530 SEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSV 589
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I G C+ + A+ + + + D Y L D L
Sbjct: 590 IYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDAL 628
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 103/237 (43%), Gaps = 1/237 (0%)
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
A+ + M I ++ V+ + A A +L M GV+P++ N +
Sbjct: 216 ARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIY 275
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
L K K+++A R L+ M G+ P+ YN L+ G+C R++ A EL M GC
Sbjct: 276 VLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPP 335
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKG-IKPDVVIYNTLFVVLFEIHQVERAFKL 342
SY ++ CK++++E L M+ + PD V YNTL L + + A
Sbjct: 336 DKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVF 395
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
E + G D Y +D CKN I +A L + C D+ Y +IDG
Sbjct: 396 LREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDG 452
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 10/222 (4%)
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D+++ T + +G A+ +L M +G++ + F+ +M + G + A R+L
Sbjct: 205 DILSKTRLCQG---------ARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRIL 255
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
LM + GV P+ + NT + ++ +A M+ G + SY+ LI GYC
Sbjct: 256 TLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDV 315
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM-QRDGVAADTWT 357
I+ AL L EM KG PD V Y T+ L + +VE +L + M Q + D T
Sbjct: 316 HRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVT 375
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
Y T I L K+ + +A+ R +D Y+ ++D
Sbjct: 376 YNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDS 417
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%)
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q R +A VY T++D T A+ + M G + ++S ++ Y + +
Sbjct: 190 QWRYRHDAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLR 249
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL + M G++PD+ I NT VL + +++E+A + + M+ G+ D +Y I
Sbjct: 250 NALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLI 309
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
G C I +A+EL + C D +Y
Sbjct: 310 KGYCDVHRIDDALELIAEMPFKGCPPDKVSY 340
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 52/117 (44%)
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
H Y +++ K + +GA + M +GI+ ++ + V + A ++
Sbjct: 195 HDAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRI 254
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
MQ+ GV D T I L K + + +A+ +++ E DI +YNCLI G
Sbjct: 255 LTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKG 311
>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/496 (24%), Positives = 209/496 (42%), Gaps = 110/496 (22%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV----- 68
PPP+ +N+LF C K D V+ L+K + + P YT+N+LI+ C+MG +
Sbjct: 115 PPPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENARE 174
Query: 69 ------------------------------SHGFVVLGRILRSCFTPNAVTFTSLIKGLC 98
SHG +L + S PN V + ++I LC
Sbjct: 175 VFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLC 234
Query: 99 AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV- 157
E + +EA L K+R G P++ T+N I L ++G + A +F +M + E G+
Sbjct: 235 GEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQI-DEEMGLP 293
Query: 158 ----------------EGFVDKAKELFLQMK----------------------------- 172
EG ++A+ +F MK
Sbjct: 294 KPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLI 353
Query: 173 -----DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
++NI P++ +Y ++ G C +++A+ +L M + GV P+ VT++ ++ C+
Sbjct: 354 LNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCR 413
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
GK+ EA+ +L MIQ+G PN + N L+ GR + A++L M G +
Sbjct: 414 RGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVT 473
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIK-----------------------PDVVIYN 324
+ +ING CK ++ A+ + M ++G PD + Y
Sbjct: 474 CNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYA 533
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
T+ L ++ +V+ A K EM ++ D+ + TFI CK + A + + +
Sbjct: 534 TIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKK 593
Query: 385 KCELDIRAYNCLIDGL 400
C +R YN LI GL
Sbjct: 594 GCNKSLRTYNSLIQGL 609
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 184/400 (46%), Gaps = 48/400 (12%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
IFD M N + S+NI L ++ + + + P+LY+YNIL++
Sbjct: 318 AIFDSMKN--SETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHG 375
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK G S +LG + S P+ VT+++L+ G C +I+EA + ++ GC PN
Sbjct: 376 LCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPN 435
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
++T N L++ L++ EG +A++L M + D V
Sbjct: 436 MYTCNILLHSLWK-----------------------EGRASEAEDLLQMMNERGYGLDNV 472
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ-----------------------PNVVTF 218
T ++I G C A + ++A ++ M +G P+ +T+
Sbjct: 473 TCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITY 532
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
I+ LCK G++DEA + L MI + P++ +++T + +C G+++ A + ME
Sbjct: 533 ATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEK 592
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
GC ++ +Y+ LI G +I L EM +GI P+V YN + L E +++
Sbjct: 593 KGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKD 652
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
A L DEM + G++ + +T+R I K A ELF
Sbjct: 653 ATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELF 692
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 181/450 (40%), Gaps = 73/450 (16%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S+NIL L K + S+ + +G+ PD TY+ L++ +C+ G++ V
Sbjct: 364 PNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYV 423
Query: 75 LGRILR-SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
L +++ CF PN T L+ L E R EA L + G + T NT+INGL
Sbjct: 424 LREMIQVGCF-PNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLC 482
Query: 134 RTGHTIVALNLFEEMAS-GNGEFG----------------------------------VE 158
+ G+ A+ + M + G+ G
Sbjct: 483 KAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKV 542
Query: 159 GFVDKAKELFLQMKDENINPDVV-----------------------------------TY 183
G VD+AK+ L+M + ++PD + TY
Sbjct: 543 GRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTY 602
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
S+I+G N E L+ EM ++G+ PNV T+N I+ L + GK+ +A+ LLD M+Q
Sbjct: 603 NSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQ 662
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G+ PN + + L+ F A+ELF S+ C H YS + N E
Sbjct: 663 KGISPNIYTFRILIGAFFKACDFGAAQELFEIALSL-CGHKESLYSFMFNELLAGGETLK 721
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A L+ L + + +Y L L + +++ A + +M + D ++ ID
Sbjct: 722 AKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVID 781
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAY 393
L K A E + + E D +
Sbjct: 782 ELGKRGSKHAADEFAERMMEMASETDFNEH 811
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 110/289 (38%), Gaps = 46/289 (15%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD N + P ++ + G L K D + L PD ++ I +
Sbjct: 515 LFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNY 574
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G++S F VL + + + T+ SLI+GL +E++I E L +++ G PNV
Sbjct: 575 CKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNV 634
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------------------------ 152
+TYN +I+ L G A L +EM
Sbjct: 635 YTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEI 694
Query: 153 ----------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
E G KAKELF D ++ Y +I C
Sbjct: 695 ALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKL 754
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
++A +L +MMD+ + +F ++DEL K G A + M+++
Sbjct: 755 DDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMMEMA 803
>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 191/373 (51%), Gaps = 28/373 (7%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G P++ YN +I +CK+G + + ++V + F P TF ++I G C E + +
Sbjct: 235 GCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVAS 294
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHT---------IVALNLFEEMAS------- 150
L ++++ G +V+ N +I+ YR G+ I+A + ++A+
Sbjct: 295 DRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINR 354
Query: 151 ----GNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
G E V GF+D+A + + + P+ ++Y +I+ +C + +++ A LL++M
Sbjct: 355 LCKEGKKEVAV-GFLDEASK-------KGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQM 406
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
++G +P++VT+ +++ L +G MD+A + +I GV P+A +YN LM G C TGR
Sbjct: 407 AERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRF 466
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
AK LF M + Y+ LI+G+ ++ + + A ++ + KG+K DVV +N +
Sbjct: 467 LPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAM 526
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
++ A + M + + D +TY T IDG K + A+++FR + KC
Sbjct: 527 IKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKC 586
Query: 387 ELDIRAYNCLIDG 399
+ ++ Y LI+G
Sbjct: 587 KPNVVTYTSLING 599
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 168/357 (47%), Gaps = 36/357 (10%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
PD+ TYNILIN CK G+ L + PN +++ LI+ C A+ L
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL 169
++ GC+P++ TY LI+GL +GH +D A + +
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGH-----------------------MDDAVNMKV 439
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
++ D ++PD Y ++ G C + AK L EM+D+ + P+ + ++D ++G
Sbjct: 440 KLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSG 499
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV---F 286
DEA ++ L ++ GV+ + +N ++ GFC +G ++ A M M H V F
Sbjct: 500 DFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEA---LACMNRMNEEHLVPDKF 556
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL---FVVLFEIHQVERAFKLF 343
+YS +I+GY K +++ A+ ++ M KP+VV Y +L F + E FK
Sbjct: 557 TYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFK-- 614
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVE-AVELFRTLRILKCELDIRAYNCLIDG 399
EMQ + + TY T I L K S +E AV + + KC + +NCL+ G
Sbjct: 615 -EMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQG 670
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 170/387 (43%), Gaps = 27/387 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++NIL L K + + + GL P+ +Y LI +CK +
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+ VT+ LI GL + +A + KL G P+ YN L++GL +
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TG + A LF EM N F G D+A+++F ++ + DVV
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ ++I+GFC + +EA + M ++ + P+ T++ I+D K M A ++ M
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYME 582
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE-I 301
+ +PN Y +L++GFC G A+E F M+ V +Y+ LI K +
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTL 642
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTL---FV------VLFEI----HQVERAF-KLFDEMQ 347
E A+ + M++ P+ V +N L FV VL E H F + F M+
Sbjct: 643 EKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMK 702
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEA 374
DG + Y + + LC + + A
Sbjct: 703 SDGWSDHAAAYNSALVCLCVHGMVKTA 729
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 157/344 (45%), Gaps = 27/344 (7%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P + ++ IL L + H D +++ +L G+ PD YN+L++ CK GR
Sbjct: 409 RGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLP 468
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
++ +L P+A + +LI G EA +F+ G + +V +N +I
Sbjct: 469 AKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIK 528
Query: 131 GLYRTG---HTIVALNLFEEMASGNGEFG----VEGFVDK-----AKELFLQMKDENINP 178
G R+G + +N E +F ++G+V + A ++F M+ P
Sbjct: 529 GFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKP 588
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK-NGKMDEASRL 237
+VVTYTS+I GFC D+ A+ EM + + PNVVT+ ++ L K + +++A
Sbjct: 589 NVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYY 648
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFC--LTGRV-------NRAK-----ELFVSMESMGCTH 283
+LM+ PN +N L+ GF +G+V N + E F M+S G +
Sbjct: 649 WELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSD 708
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
+Y+ + C + ++ A +M+ KG PD V + +
Sbjct: 709 HAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAIL 752
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 118/325 (36%), Gaps = 64/325 (19%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P +N+L L K + LF + + PD Y Y LI+ F + G
Sbjct: 444 RGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDE 503
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
V + + V ++IKG C + EA A ++ P+ FTY+T+I+
Sbjct: 504 ARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIID 563
Query: 131 GLYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENIN 177
G + A+ +F M NG F +G A+E F +M+ ++
Sbjct: 564 GYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLING-FCCQGDFKMAEETFKEMQLRDLV 622
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIE-MMDQGVQPNVVTFNVIMDE------------ 224
P+VVTYT++IR + E E MM PN VTFN ++
Sbjct: 623 PNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAE 682
Query: 225 -------------------------------------LCKNGKMDEASRLLDLMIQIGVR 247
LC +G + A D M++ G
Sbjct: 683 PDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFS 742
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKEL 272
P+ + ++ GFC+ G + + +
Sbjct: 743 PDPVSFAAILHGFCVVGNSKQWRNM 767
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 107/258 (41%), Gaps = 35/258 (13%)
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
PDV+ S++ + +A+ + EM D+G + + +++ +C GK++ +L
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
++ G PN YNT++ G+C G + A +F ++ G T+ ++ +ING+CK
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 298 NKEIEGALSLYGEMLSKGI-----------------------------------KPDVVI 322
+ + L E+ +G+ KPDV
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
YN L L + + E A DE + G+ + +Y I CK+ A +L +
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407
Query: 383 ILKCELDIRAYNCLIDGL 400
C+ DI Y LI GL
Sbjct: 408 ERGCKPDIVTYGILIHGL 425
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 95/205 (46%), Gaps = 1/205 (0%)
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI-GVRPNAFVYN 254
+NE + +L + ++ V+ + ++ ++G + +A + D ++++ P+ N
Sbjct: 115 FNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACN 174
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L+ + R+ A++++ M G + +S IL+ G C ++E L K
Sbjct: 175 SLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGK 234
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G P++V YNT+ ++ +E A+ +F E++ G T+ T I+G CK V +
Sbjct: 235 GCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVAS 294
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
L ++ + + N +ID
Sbjct: 295 DRLLSEVKERGLRVSVWFLNNIIDA 319
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 185/395 (46%), Gaps = 14/395 (3%)
Query: 18 CSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGR 77
CSF + L K + + SL +L G+ P+++ YN LI+ CK R +
Sbjct: 329 CSF--MIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKE 386
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
+ PN VT+ LI LC I +A LF K+R G + V+ YN+LING + G
Sbjct: 387 MAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGS 446
Query: 138 TIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTS 185
A L M G + EL +M + I + T+T+
Sbjct: 447 LDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTA 506
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
+I GFC +EA L +M+D V PN VTFNV+++ C G + +A +L D M+++G
Sbjct: 507 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG 566
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
++P+ + Y +L+ G CLT V++A E +E+ FS + L+ G+ +
Sbjct: 567 LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETY 626
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
L+ EM +G+K D+V + + + H E++ LF EM+ GV D Y ID L
Sbjct: 627 HLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDAL 686
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
K +++A+ + + + + + LI+ L
Sbjct: 687 SKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNL 721
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 174/362 (48%), Gaps = 23/362 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+N+L L KN + + + + G+ D TY L+ FC+M + + ++
Sbjct: 259 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI 318
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
R F P+ + +I L + + EA +L KL G PNVF YN LI+ L +
Sbjct: 319 RLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCK----- 373
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
N F D A LF +M + P+ VTY +I C +A
Sbjct: 374 ------------NERF------DDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDA 415
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
CL +M D+G++ V +N +++ CK G +D A LL M++ G+ P A Y+ L+ G
Sbjct: 416 LCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAG 475
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
C G ++ EL M G ++++ LING+CK+K+++ A L+ +M+ + P+
Sbjct: 476 LCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN 535
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
V +N + + + +AF+L+D+M G+ D +TYR+ I GLC S + +A E
Sbjct: 536 EVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA 595
Query: 380 TL 381
L
Sbjct: 596 DL 597
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 173/356 (48%), Gaps = 13/356 (3%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+F L K+K D LF ++ + + P+ T+N++I +C +G + F + ++
Sbjct: 503 TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQM 562
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ P+ T+ SLI GLC S + +A L N F+ L+ G +R G
Sbjct: 563 VEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRF 622
Query: 139 IVALNLFEEMASGNGEFGVEGFV----------DKAKE--LFLQMKDENINPDVVTYTSV 186
+L++EMA + + F DK K LF +MK++ + PD + YT +
Sbjct: 623 TETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCM 682
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I + +A +M+ G PN VT V+++ LCK+G + A L M+ V
Sbjct: 683 IDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNV 742
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
PN F YN +D F G + +AK+L +M G ++ S++ILI G CK +I+ A+
Sbjct: 743 LPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAID 801
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
L ++ G PD + Y+T+ L ++ + +AF+L++EM G+ D Y FI
Sbjct: 802 LMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 857
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 185/396 (46%), Gaps = 15/396 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S++ L L +N + + L + + G+ + YT+ LIN FCK ++ +
Sbjct: 464 PTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 523
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ S PN VTF +I+G C I +A L+ ++ G +P+ +TY +LI+GL
Sbjct: 524 FDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCL 583
Query: 135 TG-------------HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
T ++ LN F A G F EG + L+ +M + D+V
Sbjct: 584 TSGVSKANEFVADLENSYAVLNNFSLTALLYG-FFREGRFTETYHLWDEMAVRGVKLDLV 642
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
++T ++ +D ++ L EM +QGV+P+ + + ++D L K M +A D M
Sbjct: 643 SFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQM 702
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G PN + L++ C +G + A+ L M + F+Y+ ++ + ++
Sbjct: 703 VVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDM 762
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A L+ ML +G +V +N L L + +++ A L ++ G + D +Y T
Sbjct: 763 EKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTI 821
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
I LCK I +A EL+ + + D+ AYN I
Sbjct: 822 IHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 857
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 138/283 (48%), Gaps = 23/283 (8%)
Query: 117 GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENI 176
G N +T + ++ L + +A +LF++M LQ +
Sbjct: 181 GITVNQYTASQILFSLVKIRQFALARDLFDKM--------------------LQ---SGV 217
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
+ D YT+ IR +C + + + A+ L++ M +GV+ + V +NV+M LCKN ++ EA
Sbjct: 218 HLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVE 277
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+ ++M+ IGV + Y TL+ GFC + A + M +G + + S +I+
Sbjct: 278 VKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELR 337
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K + +E A SL ++ G+ P+V YN L L + + + A +LF EM G+ +
Sbjct: 338 KKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEV 397
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
TY I LCK I +A+ LF +R ++ + YN LI+G
Sbjct: 398 TYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLING 440
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 160/374 (42%), Gaps = 53/374 (14%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFG--CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+FD M++ P V +FN++ CL N L+ ++ GL PD YTY LI+
Sbjct: 523 LFDKMIDSNVIPNEV-TFNVMIEGYCLVGNIR--KAFQLYDQMVEMGLKPDNYTYRSLIS 579
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME--------------- 105
C VS + + S N + T+L+ G E R E
Sbjct: 580 GLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKL 639
Query: 106 --------------------AAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLF 145
+ LF +++ G +P+ Y +I+ L + + I ALN +
Sbjct: 640 DLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCW 699
Query: 146 EEMA----SGN--------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
++M S N G++ A+ L +M N+ P+ TY + F
Sbjct: 700 DQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATE 759
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
D +AK L M+ QG ++V+FN+++ LCK GK+ EA L+ + + G P+ Y
Sbjct: 760 GDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISY 818
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
+T++ C G +N+A EL+ M G V +Y+I I + E + AL +Y M+
Sbjct: 819 STIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIR 878
Query: 314 KGIKPDVVIYNTLF 327
G++P+ Y L
Sbjct: 879 SGVQPNWDTYRALL 892
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 122/268 (45%), Gaps = 13/268 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
SF I+ K + LF+ + G+ PD Y +I+ K + ++
Sbjct: 643 SFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQM 702
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ ++PN VT T LI LC + A L ++ PN FTYN ++ G
Sbjct: 703 VVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDM 762
Query: 139 IVALNLFEEMASGNGEFGVE-----------GFVDKAKELFLQMKDENINPDVVTYTSVI 187
A +L M G+ V G + +A +L ++ + +PD ++Y+++I
Sbjct: 763 EKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTII 822
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
C D N+A L EM+ +G++P+VV +N+ + +G+ D+A + MI+ GV+
Sbjct: 823 HELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQ 882
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVS 275
PN Y L+ G L V++ + L ++
Sbjct: 883 PNWDTYRALLSGISLM--VSKGQALLLT 908
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%)
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+ G+ N T + I+ L K + A L D M+Q GV + +VY + +C + +
Sbjct: 178 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 237
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ A+ L V MES G + Y++L+ G CKN ++ A+ + M++ G+ D V Y TL
Sbjct: 238 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 297
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
+ ++E A ++ +M R G ID L K + EA L L L
Sbjct: 298 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 357
Query: 387 ELDIRAYNCLIDGL 400
++ AYN LID L
Sbjct: 358 VPNVFAYNALIDKL 371
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 55/116 (47%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ SFNIL L K + L ++ +G PD +Y+ +I+ CKMG ++ F +
Sbjct: 780 IVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWN 839
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+L P+ V + I+ +A ++T + G +PN TY L++G+
Sbjct: 840 EMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 895
>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/457 (25%), Positives = 209/457 (45%), Gaps = 77/457 (16%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S N L L ++ D +++++ L GL P+ YTY I I C+ G V
Sbjct: 190 PHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDV 249
Query: 75 LGRILRSCFTPNAVT-----------------------------------FTSLIKGLCA 99
+ + PNAVT +T++I+G C+
Sbjct: 250 FREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCS 309
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG------ 153
E ++ EA +F + G P+ + Y LI+ + G+ + A+ L +M S NG
Sbjct: 310 EMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVS-NGIKTNLV 368
Query: 154 ----EFGVEGF-------------------VDKAKELFLQMKDENINPDVVTYTSVIRGF 190
EF G V++A EL +MK ++ DVV YT++I G+
Sbjct: 369 DQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGY 428
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C +AK + EM ++G++P++VT+N+++ +NG EA LLD + G++PN+
Sbjct: 429 CLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNS 488
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
+N +++G C+ G+V A+ ++E + +YS +++GYCK A L+
Sbjct: 489 ATHNRIIEGLCMAGKVKEAEAFLNTLED----KCLENYSAMVDGYCKANFTRKAYELFSR 544
Query: 311 MLSKGI--------KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
+ +GI +P+ ++Y L ++RA +FD + G+ D TY I
Sbjct: 545 LSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMI 604
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+G C+ + + EA ++F ++ + D+ Y ++DG
Sbjct: 605 NGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDG 641
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 162/308 (52%), Gaps = 24/308 (7%)
Query: 40 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
FK +G+F D YNI+++ CK+G+V +L + + + V +T+LI G C
Sbjct: 371 FKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCL 430
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE-------EMASGN 152
+ ++++A +F +++ G EP++ TYN L+ G R G AL L + + S
Sbjct: 431 QGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSAT 490
Query: 153 GEFGVEGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
+EG V +A+ ++D+ + Y++++ G+C AN +A L +
Sbjct: 491 HNRIIEGLCMAGKVKEAEAFLNTLEDKCLE----NYSAMVDGYCKANFTRKAYELFSRLS 546
Query: 208 DQG--------VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
QG V+PN + + ++ C++G M A + D++++ G+ P+ Y +++G
Sbjct: 547 KQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMING 606
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
+C + A+++F M+ G V +Y+++++G+ K ++ A++LY EM+++G++PD
Sbjct: 607 YCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPD 666
Query: 320 VVIYNTLF 327
+V Y L
Sbjct: 667 IVTYTALL 674
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 168/372 (45%), Gaps = 32/372 (8%)
Query: 56 NILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV 115
++L+ + ++G L + R F P+ ++ L+ L +I A A++ L+
Sbjct: 161 DMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKR 220
Query: 116 FGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG-------VEGF-----VDK 163
G PN +TY I L R G+ A+++F EM +EG D
Sbjct: 221 LGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDL 280
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
E ++ N D YT+VIRGFC EA+ + I+M+++G+ P+ + ++
Sbjct: 281 GYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIH 340
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPN----------------AFVYNTLMDGFCLTGRVN 267
CK G + +A L + M+ G++ N +YN ++D C G+V
Sbjct: 341 AYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVE 400
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A EL M+ + V Y+ LI GYC ++ A +++ EM +GI+PD+V YN L
Sbjct: 401 EAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILV 460
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
+ A +L D + G+ ++ T+ I+GLC + EA TL KC
Sbjct: 461 GGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLED-KC- 518
Query: 388 LDIRAYNCLIDG 399
+ Y+ ++DG
Sbjct: 519 --LENYSAMVDG 528
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 118/244 (48%), Gaps = 24/244 (9%)
Query: 38 SLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 97
++F+ + G+ PD+ TYNIL+ F + G +L I PN+ T +I+GL
Sbjct: 439 NMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGL 498
Query: 98 CAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN----- 152
C ++ EA A L C N Y+ +++G + T A LF ++
Sbjct: 499 CMAGKVKEAEAFLNTLED-KCLEN---YSAMVDGYCKANFTRKAYELFSRLSKQGILRML 554
Query: 153 ---------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
G F +G + +A+ +F + + I PDV+TYT +I G+C N
Sbjct: 555 ALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLR 614
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
EA+ + +M ++G++P+V+T+ V++D K + +A L D MI G++P+ Y L+
Sbjct: 615 EARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALL 674
Query: 258 DGFC 261
G C
Sbjct: 675 PGKC 678
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 148/349 (42%), Gaps = 33/349 (9%)
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRT- 135
++ S F N T+ +LI+ LC + +L ++ + G + +V ++ I L+
Sbjct: 86 QLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSE--IVGSKESVLGFD--ITALFDVL 141
Query: 136 ---------GHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
H+ V + + + + + G D+A + Q K P +++ +
Sbjct: 142 REGGGEVEGEHSSVLILVLDMLVKA---YVRVGMFDEAIDALFQTKRRGFVPHIMSCNFL 198
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
+ + A + + G+ PN T+ + + LC+ G +EA + M + GV
Sbjct: 199 MNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGV 258
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
PNA +T ++G C R + E ++ + F+Y+ +I G+C +++ A
Sbjct: 259 NPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAED 318
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL----------------FDEMQRDG 350
++ +M+++GI PD IY L + + +A L F E + G
Sbjct: 319 VFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSG 378
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ D Y +D LCK + EAVEL ++ + LD+ Y LI G
Sbjct: 379 IFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAG 427
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 54/117 (46%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + L G ++ +F L G+ PD+ TY ++IN +C++ + +
Sbjct: 560 PNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDI 619
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
+ P+ +T+T ++ G + + +A L+ ++ G +P++ TY L+ G
Sbjct: 620 FNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPG 676
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD ML R P V ++ ++ + +F + G+ PD+ TY ++++
Sbjct: 584 VFD-MLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGH 642
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 98
K + + ++ P+ VT+T+L+ G C
Sbjct: 643 SKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGKC 678
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 177/379 (46%), Gaps = 17/379 (4%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +FNI+ L K + G+ P + TYN L+ F GR+ +++
Sbjct: 225 VYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIIS 284
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ F P+ T+ ++ +C E R A+ + +++ G P+ +YN LI G G
Sbjct: 285 EMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNG 341
Query: 137 HTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
+A +EM +G F +E ++ A+ L +++++ I D VTY
Sbjct: 342 DLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLF-MENKIEAAEILIREIREKGIVLDSVTY 400
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
+I G+C D +A L EMM G+QP T+ ++ LC+ K EA L + ++
Sbjct: 401 NILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVG 460
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G++P+ + NTLMDG C G ++RA L M+ M +Y+ L+ G C + E
Sbjct: 461 KGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEE 520
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A L GEM +GIKPD + YNTL + + AF + DEM G TY +
Sbjct: 521 ARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLK 580
Query: 364 GLCKNSYIVEAVELFRTLR 382
GL KN A EL R ++
Sbjct: 581 GLSKNQEGELAEELLREMK 599
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 181/381 (47%), Gaps = 26/381 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F++L C + + D + F + G +P T N ++ ++ R+ + +V +
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
R N TF +I LC E ++ +A + VFG +P + TYNTL+ G
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQG-------- 269
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
F + G ++ A+ + +MK + PD+ TY ++ C + A
Sbjct: 270 ---------------FSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMC---NEGRA 311
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
+L EM + G+ P+ V++N+++ NG ++ A D M++ G+ P + YNTL+ G
Sbjct: 312 SEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHG 371
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
+ ++ A+ L + G +Y+ILINGYC++ + + A +L+ EM++ GI+P
Sbjct: 372 LFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPT 431
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
Y +L VL ++ A +LF+++ G+ D T +DG C + A L +
Sbjct: 432 QFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLK 491
Query: 380 TLRILKCELDIRAYNCLIDGL 400
+ ++ D YNCL+ GL
Sbjct: 492 EMDMMSINPDDVTYNCLMRGL 512
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 169/364 (46%), Gaps = 17/364 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N L + + + + S G PD+ TYN +++ C GR S V
Sbjct: 258 PTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---V 314
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P++V++ LI+G + A A ++ G P +TYNTLI+GL+
Sbjct: 315 LREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFM 374
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
A L E+ NG + G KA L +M + I P
Sbjct: 375 ENKIEAAEILIREIREKGIVLDSVTYNILING-YCQHGDAKKAFALHDEMMTDGIQPTQF 433
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYTS+I C N EA L +++ +G++P++V N +MD C G MD A LL M
Sbjct: 434 TYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ + P+ YN LM G C G+ A+EL M+ G SY+ LI+GY K +
Sbjct: 494 DMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDT 553
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
+ A + EMLS G P ++ YN L L + + E A +L EM+ +G+ + ++ +
Sbjct: 554 KHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSV 613
Query: 362 IDGL 365
I+ +
Sbjct: 614 IEAM 617
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 3/197 (1%)
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
L+ D+ + + F++++ C+ +DEA LM + G P N ++
Sbjct: 143 LVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSR 202
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
R+ A + M M V++++I+IN CK +++ A G M GIKP +V
Sbjct: 203 LNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVT 262
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
YNTL ++E A + EM+ G D TY + +C A E+ R ++
Sbjct: 263 YNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMK 319
Query: 383 ILKCELDIRAYNCLIDG 399
+ D +YN LI G
Sbjct: 320 EIGLVPDSVSYNILIRG 336
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
++M P ++N L L ++ L + G+ PD +YN LI+ + K G
Sbjct: 493 MDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGD 552
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
H F+V +L F P +T+ +L+KGL A L +++ G PN ++ +
Sbjct: 553 TKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCS 612
Query: 128 LINGL 132
+I +
Sbjct: 613 VIEAM 617
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 67/142 (47%), Gaps = 5/142 (3%)
Query: 262 LTGRVNRAKELF----VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
+T R N + LF ++ + + T+ + +L+ C+ + ++ A+ + M KG
Sbjct: 129 VTSRKNSIRNLFDELVLAHDRLETKSTIL-FDLLVRCCCQLRMVDEAIECFYLMKEKGFY 187
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
P N + +L ++++E A+ + +M R + ++ +T+ I+ LCK + +A
Sbjct: 188 PKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGF 247
Query: 378 FRTLRILKCELDIRAYNCLIDG 399
+ + + I YN L+ G
Sbjct: 248 LGIMEVFGIKPTIVTYNTLVQG 269
>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02060, chloroplastic; Flags: Precursor
gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 191/393 (48%), Gaps = 36/393 (9%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FN L + + LF+ + G+ P + T+N L++ K GR + +
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 80 RS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
R+ TP++ TF +LI G C S + EA +F + ++ C P+V TYNT+I+GL R G
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+A N+ + G + KA + ++P+VV+YT+++RG+C + +E
Sbjct: 261 KIAHNV------------LSGMLKKATD---------VHPNVVSYTTLVRGYCMKQEIDE 299
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL----DLMIQIGVRPNAFVYN 254
A + +M+ +G++PN VT+N ++ L + + DE +L D P+A +N
Sbjct: 300 AVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFA--PDACTFN 357
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+ C G ++ A ++F M +M SYS+LI C E + A +L+ E+ K
Sbjct: 358 ILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEK 417
Query: 315 GI-------KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
+ KP YN +F L + ++A K+F ++ + GV D +Y+T I G C+
Sbjct: 418 EVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV-QDPPSYKTLITGHCR 476
Query: 368 NSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
A EL + + D+ Y LIDGL
Sbjct: 477 EGKFKPAYELLVLMLRREFVPDLETYELLIDGL 509
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 159/351 (45%), Gaps = 24/351 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M P +FN L KN D +FK + PD+ TYN +I+
Sbjct: 195 LFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGL 254
Query: 63 CKMGRVSHGFVVLGRILRSC--FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C+ G+V VL +L+ PN V++T+L++G C + I EA +F + G +P
Sbjct: 255 CRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKP 314
Query: 121 NVFTYNTLINGLYRTGH-------TIVALNLFEEMASGNGEFGV-------EGFVDKAKE 166
N TYNTLI GL I + F A F + G +D A +
Sbjct: 315 NAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMK 374
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV-------QPNVVTFN 219
+F +M + ++PD +Y+ +IR C N+++ A+ L E+ ++ V +P +N
Sbjct: 375 VFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYN 434
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
+ + LC NGK +A ++ +++ GV+ + Y TL+ G C G+ A EL V M
Sbjct: 435 PMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRR 493
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
+ +Y +LI+G K E A ML P ++++ L
Sbjct: 494 EFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAEL 544
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 149/364 (40%), Gaps = 24/364 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNS--TGLFPDLYTYNILIN 60
+F ML+ R P ++N L L++ YD + + N T PD T+NILI
Sbjct: 303 VFHDMLS-RGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIK 361
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL----RVF 116
C G + V +L P++ +++ LI+ LC + A LF +L +
Sbjct: 362 AHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLL 421
Query: 117 G---CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE-----------FGVEGFVD 162
G C+P YN + L G T A +F ++ + EG
Sbjct: 422 GKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFK 481
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
A EL + M PD+ TY +I G + A L M+ P TF+ ++
Sbjct: 482 PAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVL 541
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
EL K +E+ L+ LM++ +R N + ++ + + +A F+ + +
Sbjct: 542 AELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKA---FLIVRLLYDN 598
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
+ L+ C+N+++ A +L L K D+ NT+ L + + AF L
Sbjct: 599 GYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSL 658
Query: 343 FDEM 346
++E+
Sbjct: 659 YNEL 662
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 134/337 (39%), Gaps = 64/337 (18%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC---KMGRVSHG 71
P C+FNIL H D + +F+ + + L PD +Y++LI C + R
Sbjct: 351 PDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETL 410
Query: 72 F-------VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE----- 119
F V+LG+ C P A + + + LCA + +A +F +L G +
Sbjct: 411 FNELFEKEVLLGK--DEC-KPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSY 467
Query: 120 -----------------------------PNVFTYNTLINGLYRTGHTIVALNLFEEMAS 150
P++ TY LI+GL + G ++A + + M
Sbjct: 468 KTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLR 527
Query: 151 GN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+ E F +++ L M ++ I ++ T V+R +++ E
Sbjct: 528 SSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVR-LLFSSAQKE 586
Query: 199 AKCLLIEMM-DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
L++ ++ D G +V ++ LC+N K+ +A L+ ++ + NT++
Sbjct: 587 KAFLIVRLLYDNGY---LVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVI 643
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+G C R + A L+ + +G + + +L N
Sbjct: 644 EGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNA 680
>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g54980, mitochondrial; Flags: Precursor
gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 851
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 192/383 (50%), Gaps = 12/383 (3%)
Query: 29 KNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 88
K + D + L + S G+ ++ LI CK + V+ ++ + +PN+V
Sbjct: 316 KQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSV 375
Query: 89 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE- 147
TF+ LI+ + +A + K+ V G P+VF +T+I G + AL LF+E
Sbjct: 376 TFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDES 435
Query: 148 MASGNGEFGV----------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
+G V +G D+A EL +M+ I P+VV+Y +V+ G C + +
Sbjct: 436 FETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMD 495
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
A+ + ++++G++PN T+++++D +N A +++ M + N VY T++
Sbjct: 496 LARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTII 555
Query: 258 DGFCLTGRVNRAKELFVSM-ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+G C G+ ++A+EL +M E + SY+ +I+G+ K E++ A++ Y EM GI
Sbjct: 556 NGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGI 615
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
P+V+ Y +L L + +++++A ++ DEM+ GV D Y IDG CK S + A
Sbjct: 616 SPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASA 675
Query: 377 LFRTLRILKCELDIRAYNCLIDG 399
LF L YN LI G
Sbjct: 676 LFSELLEEGLNPSQPIYNSLISG 698
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 199/446 (44%), Gaps = 48/446 (10%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTY----- 55
+FD M PSP V +F++L KN + L +K++ GL P ++
Sbjct: 359 LVLFDKMEKEGPSPNSV-TFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQ 417
Query: 56 -----------------------------NILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
N +++ CK G+ +L ++ PN
Sbjct: 418 GWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPN 477
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
V++ +++ G C + + A +F+ + G +PN +TY+ LI+G +R AL +
Sbjct: 478 VVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVN 537
Query: 147 EMASGNGEF-GVE-----------GFVDKAKELFLQMKDEN-INPDVVTYTSVIRGFCYA 193
M S N E GV G KA+EL M +E + ++Y S+I GF
Sbjct: 538 HMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKE 597
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
+ + A EM G+ PNV+T+ +M+ LCKN +MD+A + D M GV+ + Y
Sbjct: 598 GEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAY 657
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
L+DGFC + A LF + G + Y+ LI+G+ + AL LY +ML
Sbjct: 658 GALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLK 717
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
G++ D+ Y TL L + + A +L+ EMQ G+ D Y ++GL K V+
Sbjct: 718 DGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVK 777
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
V++F ++ ++ YN +I G
Sbjct: 778 VVKMFEEMKKNNVTPNVLIYNAVIAG 803
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 171/370 (46%), Gaps = 13/370 (3%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
N + L K D L ++ S G+ P++ +YN ++ C+ + +V IL
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
PN T++ LI G A + + E N Y T+INGL + G T
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566
Query: 141 ALNLFEEMASGN-------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
A L M F EG +D A + +M I+P+V+TYTS++
Sbjct: 567 ARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLM 626
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
G C N ++A + EM ++GV+ ++ + ++D CK M+ AS L +++ G+
Sbjct: 627 NGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLN 686
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P+ +YN+L+ GF G + A +L+ M G + +Y+ LI+G K+ + A L
Sbjct: 687 PSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASEL 746
Query: 308 YGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
Y EM + G+ PD +IY + L + Q + K+F+EM+++ V + Y I G +
Sbjct: 747 YTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYR 806
Query: 368 NSYIVEAVEL 377
+ EA L
Sbjct: 807 EGNLDEAFRL 816
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 178/452 (39%), Gaps = 94/452 (20%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+FN L +K++ D + + ++ + P N ++ + ++ + R+
Sbjct: 165 AFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRM 224
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ + VT L++ E + EA + ++ G EP+ Y+ + +T
Sbjct: 225 VAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDL 284
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV------------ 186
+A +L EM K K+L + P TYTSV
Sbjct: 285 AMANSLLREM--------------KEKKLCV--------PSQETYTSVILASVKQGNMDD 322
Query: 187 -----------------------IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
I G C ND A L +M +G PN VTF+V+++
Sbjct: 323 AIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIE 382
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRP----------------------------------N 249
KNG+M++A M +G+ P N
Sbjct: 383 WFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLAN 442
Query: 250 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYG 309
FV NT++ C G+ + A EL MES G V SY+ ++ G+C+ K ++ A ++
Sbjct: 443 VFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFS 502
Query: 310 EMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNS 369
+L KG+KP+ Y+ L F H + A ++ + M + + Y+T I+GLCK
Sbjct: 503 NILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVG 562
Query: 370 YIVEAVELFRTLRILKCELDIR--AYNCLIDG 399
+A EL + I + L + +YN +IDG
Sbjct: 563 QTSKARELLANM-IEEKRLCVSCMSYNSIIDG 593
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 177/373 (47%), Gaps = 15/373 (4%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
+L P P V ++ G A+ + + + + G+ PD YTY LI+ +CK+G
Sbjct: 138 LLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIG 197
Query: 67 RVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
R+ V +L + P+AV + +LI G C ++ A + G V TY
Sbjct: 198 RMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATY 257
Query: 126 NTLINGLYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMK 172
N L++ L+ A + EEM NG + EG KA E+F +M
Sbjct: 258 NLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILING-YCKEGNEKKALEVFEEMS 316
Query: 173 DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 232
+ + VTYTS+I F E L + +G++P+VV +N +++ C G M+
Sbjct: 317 QKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDME 376
Query: 233 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILI 292
A ++ M + + P+ YNTLM GFCL GR++ A+ L M G + SY+ LI
Sbjct: 377 RAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLI 436
Query: 293 NGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
+GY +I+ AL + EM+ KG P ++ YN L L +I Q + A L EM G+
Sbjct: 437 SGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGIT 496
Query: 353 ADTWTYRTFIDGL 365
D TY + I+GL
Sbjct: 497 PDDSTYISLIEGL 509
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 183/403 (45%), Gaps = 24/403 (5%)
Query: 16 PVCS--FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P+C+ FNI+ L L L +++ P+ TYN +I FC GRV
Sbjct: 113 PLCTTTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALE 168
Query: 74 VLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPNVFTYNTLING 131
V+ + R P+ T+ +LI G C R+ +A +F ++ G P+ YN LI G
Sbjct: 169 VMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGG 228
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPD 179
G VAL E+M V + A + +M+ +PD
Sbjct: 229 YCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPD 288
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLI--EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
V TY +I G+C + NE K L + EM +GV+ VT+ ++ + G++ E RL
Sbjct: 289 VFTYNILINGYC--KEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRL 346
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
++ ++ G+RP+ +YN L++ C G + RA E+ ME +Y+ L+ G+C
Sbjct: 347 FNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCL 406
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
++ A +L EM +GI+PD+V YNTL ++ A ++ DEM G T
Sbjct: 407 LGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMT 466
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Y I GLCK +A L + + D Y LI+GL
Sbjct: 467 YNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGL 509
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 182/411 (44%), Gaps = 42/411 (10%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLY---------TYNILINCFCK 64
P PV S + L L + LF D+Y T+NI++ C
Sbjct: 82 PIPVASLHPLLSSLPSAPAF-------------ALFADIYRLRLPLCTTTFNIMLRHLCA 128
Query: 65 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CEPNVF 123
G+ +LR PNAVT+ ++I G CA R+ A + ++R G P+ +
Sbjct: 129 TGKPVRAL----ELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKY 184
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFG---------VEGFVDKAK-ELFLQMKD 173
TY TLI+G + G A+ +F+EM + GE + G+ D K ++ LQ ++
Sbjct: 185 TYATLISGWCKIGRMEDAVKVFDEMLT-KGEVAPSAVMYNALIGGYCDVGKLDVALQYRE 243
Query: 174 E----NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+ I V TY ++ ++A +L EM G P+V T+N++++ CK G
Sbjct: 244 DMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEG 303
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+A + + M Q GVR A Y +L+ F G+V LF G V Y+
Sbjct: 304 NEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYN 363
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
LIN +C ++E A + EM K I PD + YNTL + +++ A L DEM +
Sbjct: 364 ALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKR 423
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G+ D +Y T I G I +A+ + + + YN LI GL
Sbjct: 424 GIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGL 474
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 134/284 (47%), Gaps = 23/284 (8%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++N+L L + ++ + + G PD++TYNILIN +CK G V
Sbjct: 254 VATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFE 313
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+ + AVT+TSLI + ++ E LF G P+V YN LIN + TG
Sbjct: 314 EMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINS-HCTG 372
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
G +++A E+ +M+ + I PD +TY +++RGFC
Sbjct: 373 ----------------------GDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRL 410
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+EA+ L+ EM +G+QP++V++N ++ G + +A R+ D M+ G P YN L
Sbjct: 411 DEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNAL 470
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+ G C + + A+ L M + G T +Y LI G E
Sbjct: 471 IQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTEDE 514
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 39/90 (43%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S+N L + L + + G P L TYN LI CK+ + +
Sbjct: 427 PDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENL 486
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIM 104
+ ++ TP+ T+ SLI+GL E M
Sbjct: 487 MKEMVAKGITPDDSTYISLIEGLTTEDERM 516
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 173/364 (47%), Gaps = 23/364 (6%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP FN+L L + + ++F + S G+ + ++N +I+ C+ G +
Sbjct: 237 PPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAET 296
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ R+ + TP+ T+ +LI+GLC RI +A +F K+ G +PN + LI+
Sbjct: 297 LHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHC 356
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ G L EL +M++ + PD VTY +++ G C A
Sbjct: 357 KKGDAETML-----------------------ELHREMRERGVRPDAVTYNAIVNGLCRA 393
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
D A +++EM G++P+ VT+ ++D CK ++D A + M+ GV + Y
Sbjct: 394 RDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTY 453
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
L+ G GR A+ + M G +Y+++I+ +C+ +++ L L EM +
Sbjct: 454 TALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQN 513
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG KP VV YN + ++ Q++ A L + M GV+ D TY +DG CK+ + +
Sbjct: 514 KGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTD 573
Query: 374 AVEL 377
EL
Sbjct: 574 IEEL 577
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 167/336 (49%), Gaps = 16/336 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M + R V SFN + + + D +L +R++ G+ PD+YTY LI
Sbjct: 262 VFDEMQS-RGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGL 320
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C++GR+ V ++ PNAV FT LI C + L ++R G P+
Sbjct: 321 CRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDA 380
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG-------VEGF-----VDKAKELFLQ 170
TYN ++NGL R A + EM S ++G+ +D A E+
Sbjct: 381 VTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQN 440
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M E + D VTYT++I G A +A+ +L EMM+ G++P+ T+ +++D C+ G
Sbjct: 441 MVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGD 500
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ RLL M G +P YN +M+GFC G++ A L +M ++G + +Y+I
Sbjct: 501 VKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNI 560
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
L++G+CK+ ++ L +KG PD+ +Y ++
Sbjct: 561 LLDGHCKHGKVTDIEELKS---AKGTVPDLGVYTSI 593
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 148/307 (48%), Gaps = 12/307 (3%)
Query: 105 EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF---- 160
EA A + +L G P +N L+ L R G A N+F+EM S V F
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 282
Query: 161 --------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
+D A+ L +M + + PDV TY ++I+G C +A+ + +M +G++
Sbjct: 283 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 342
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
PN V F +++D CK G + L M + GVRP+A YN +++G C + A +
Sbjct: 343 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 402
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
V M S G +Y+ LI+GYCK +E++ A+ + M+++G+ D V Y L L +
Sbjct: 403 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSK 462
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
+ A ++ EM G+ D TY ID C+ + + L + ++ + +
Sbjct: 463 AGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVT 522
Query: 393 YNCLIDG 399
YN +++G
Sbjct: 523 YNVIMNG 529
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 118/233 (50%)
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
+LQ+ D + P+ + ++R + A+ + EM +GV+ VV+FN ++ +C+
Sbjct: 228 YLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCR 287
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
G +D A L M + GV P+ + Y L+ G C GR+ A+ +F M G
Sbjct: 288 AGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVV 347
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
++ILI+ +CK + E L L+ EM +G++PD V YN + L ++ A + EM+
Sbjct: 348 FTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMR 407
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G+ DT TY T IDG CK + A+E+ + + LD Y LI GL
Sbjct: 408 SAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGL 460
>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/496 (24%), Positives = 209/496 (42%), Gaps = 110/496 (22%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV----- 68
PPP+ +N+LF C K D V+ L+K + + P YT+N+LI+ C+MG +
Sbjct: 115 PPPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENARE 174
Query: 69 ------------------------------SHGFVVLGRILRSCFTPNAVTFTSLIKGLC 98
SHG +L + S PN V + ++I LC
Sbjct: 175 VFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLC 234
Query: 99 AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV- 157
E + +EA L K+R G P++ T+N I L ++G + A +F +M + E G+
Sbjct: 235 GEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQI-DEEMGLP 293
Query: 158 ----------------EGFVDKAKELFLQMK----------------------------- 172
EG ++A+ +F MK
Sbjct: 294 KPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLI 353
Query: 173 -----DENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
++NI P++ +Y ++ G C +++A+ +L M + GV P+ VT++ ++ C+
Sbjct: 354 LNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCR 413
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
GK+ EA+ +L MIQ+G PN + N L+ GR + A++L M G +
Sbjct: 414 RGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVT 473
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIK-----------------------PDVVIYN 324
+ +ING CK ++ A+ + M ++G PD + Y
Sbjct: 474 CNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYA 533
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
T+ L ++ +V+ A K EM ++ D+ + TFI CK + A + + +
Sbjct: 534 TIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKK 593
Query: 385 KCELDIRAYNCLIDGL 400
C +R YN LI GL
Sbjct: 594 GCNKSLRTYNSLIQGL 609
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 184/400 (46%), Gaps = 48/400 (12%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
IFD M N + S+NI L ++ + + + P+LY+YNIL++
Sbjct: 318 AIFDSMKN--SETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHG 375
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK G S +LG + S P+ VT+++L+ G C +I+EA + ++ GC PN
Sbjct: 376 LCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPN 435
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
++T N L++ L++ EG +A++L M + D V
Sbjct: 436 MYTCNILLHSLWK-----------------------EGRASEAEDLLQMMNERGYGLDNV 472
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ-----------------------PNVVTF 218
T ++I G C A + ++A ++ M +G P+ +T+
Sbjct: 473 TCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITY 532
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
I+ LCK G++DEA + L MI + P++ +++T + +C G+++ A + ME
Sbjct: 533 ATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEK 592
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
GC ++ +Y+ LI G +I L EM +GI P+V YN + L E +++
Sbjct: 593 KGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKD 652
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
A L DEM + G++ + +T+R I K A ELF
Sbjct: 653 ATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELF 692
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 181/450 (40%), Gaps = 73/450 (16%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S+NIL L K + S+ + +G+ PD TY+ L++ +C+ G++ V
Sbjct: 364 PNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYV 423
Query: 75 LGRILR-SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
L +++ CF PN T L+ L E R EA L + G + T NT+INGL
Sbjct: 424 LREMIQVGCF-PNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLC 482
Query: 134 RTGHTIVALNLFEEMAS-GNGEFG----------------------------------VE 158
+ G+ A+ + M + G+ G
Sbjct: 483 KAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKV 542
Query: 159 GFVDKAKELFLQMKDENINPDVV-----------------------------------TY 183
G VD+AK+ L+M + ++PD + TY
Sbjct: 543 GRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTY 602
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
S+I+G N E L+ EM ++G+ PNV T+N I+ L + GK+ +A+ LLD M+Q
Sbjct: 603 NSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQ 662
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G+ PN + + L+ F A+ELF S+ C H YS + N E
Sbjct: 663 KGISPNIYTFRILIGAFFKACDFGAAQELFEIALSL-CGHKESLYSFMFNELLAGGETLK 721
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A L+ L + + +Y L L + +++ A + +M + D ++ ID
Sbjct: 722 AKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVID 781
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAY 393
L K A E + + E D +
Sbjct: 782 ELGKRGSKHAADEFAERMMEMASETDFNEH 811
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 110/289 (38%), Gaps = 46/289 (15%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD N + P ++ + G L K D + L PD ++ I +
Sbjct: 515 LFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNY 574
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G++S F VL + + + T+ SLI+GL +E++I E L +++ G PNV
Sbjct: 575 CKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNV 634
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------------------------ 152
+TYN +I+ L G A L +EM
Sbjct: 635 YTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEI 694
Query: 153 ----------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
E G KAKELF D ++ Y +I C
Sbjct: 695 ALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKL 754
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
++A +L +MMD+ + +F ++DEL K G A + M+++
Sbjct: 755 DDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMMEMA 803
>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
Length = 733
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 195/435 (44%), Gaps = 52/435 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + N L D + +R+ + P++ TYN LI +C + R+ +
Sbjct: 202 PDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXEL 261
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK-LRVFGCEPNVFTYNTLINGLY 133
+ + +P+ +++ +++ LC E RI E L K L+ P+ TYNT ++ L
Sbjct: 262 IAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLS 321
Query: 134 RTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVV 181
+ GH AL E F EG +DKAKE+ +M + PDVV
Sbjct: 322 KHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVV 381
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYTSVI G C ++AK +L +M G +PN V++ +++ LCKNG EA ++++
Sbjct: 382 TYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMS 441
Query: 242 IQIGVRPNAFVYNTLMDGF-----------------------------------CLTGRV 266
+ PNA Y+ LM GF C +V
Sbjct: 442 EEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKV 501
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ AK + GC V +++ +I+G+C+ ++E ALSL +M PDVV Y T+
Sbjct: 502 DEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTI 561
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF-RTLRILK 385
L + ++E A KL +M R G TYRT I C+ + + ++L + L +
Sbjct: 562 IDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQE 621
Query: 386 CELDIRAYNCLIDGL 400
C AYN +I+ L
Sbjct: 622 CRT---AYNQVIEKL 633
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 172/379 (45%), Gaps = 25/379 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L+K+ H D L + D Y+ +++ FC+ GR+ +
Sbjct: 308 PDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEI 367
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + P+ VT+TS+I GLC E ++ +A + ++ GC+PN +Y L+NGL +
Sbjct: 368 VNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCK 427
Query: 135 TGHTIVA---LNLFEE------------MASGNGEFGVEGFVDKAKELFLQMKDENINPD 179
G+++ A +N+ EE + G F EG +A +L +M + P
Sbjct: 428 NGNSLEAREMMNMSEEXWWIPNAITYSVLMHG---FRREGKSSEACDLVREMIKKGFFPT 484
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
V +I+ C +EAK + + ++ G NVV F ++ C+ ++ A LLD
Sbjct: 485 PVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLD 544
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNK 299
M P+ Y T++D GR+ A +L + M +G T +Y +I+ YC+
Sbjct: 545 DMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMG 604
Query: 300 EIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
+E L L +MLS+ + YN + L +E+A+KL ++ R D T
Sbjct: 605 RVEDLLKLLEKMLSR--QECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCH 662
Query: 360 TFIDGLCKNSYIVEAVELF 378
I+ SY+ + + L
Sbjct: 663 MLIE-----SYLSKGIPLM 676
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 171/399 (42%), Gaps = 50/399 (12%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
P+ + Y ++ + + G++ + L + ++ P+ + I L +R+ +A
Sbjct: 169 PEAFGYVMV--SYSRAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRF 226
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM------ASGNGEFGVEGFV-- 161
++++ PNV TYN LI G A L EM + V GF+
Sbjct: 227 LERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCK 286
Query: 162 -DKAKELFLQM----KDENINPDVVT---------------------------------- 182
+ KEL L M KD N+ PD VT
Sbjct: 287 EKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKV 346
Query: 183 -YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y++++ FC ++AK ++ EM +G P+VVT+ +++ LC+ K+D+A ++L M
Sbjct: 347 GYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQM 406
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G +PN Y L++G C G A+E+ E +YS+L++G+ + +
Sbjct: 407 YKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKS 466
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A L EM+ KG P V N L L + +V+ A + ++ +G A + + T
Sbjct: 467 SEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTV 526
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I G C+ + A+ L + + D+ Y +ID L
Sbjct: 527 IHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDAL 565
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 113/274 (41%), Gaps = 38/274 (13%)
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
AK + M I + V+ + A A L M G++P++ N +
Sbjct: 153 AKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXLTMMQKAGIEPDLSICNTAIH 212
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
L ++D+A R L+ M + + PN YN L+ G+C R+ A EL M GC+
Sbjct: 213 VLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSP 272
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKG-IKPDVVIYNTLFVVLFEIH-------- 334
SY ++ CK K I+ L +ML + PD V YNT FV + H
Sbjct: 273 DKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNT-FVHMLSKHGHGDEALE 331
Query: 335 ----------------------------QVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
++++A ++ +EM G D TY + I+GLC
Sbjct: 332 FLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLC 391
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + +A ++ R + C+ + +Y L++GL
Sbjct: 392 QERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGL 425
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 1/220 (0%)
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D + Y +++ AK +L M + ++ F +M + GK+ A R L
Sbjct: 133 DPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXL 192
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
+M + G+ P+ + NT + + R+++A M+ + V +Y+ LI GYC
Sbjct: 193 TMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDL 252
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG-VAADTWT 357
+E A L EM KG PD + Y T+ L + +++ L ++M +D + D T
Sbjct: 253 HRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVT 312
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
Y TF+ L K+ + EA+E R + +D Y+ ++
Sbjct: 313 YNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIV 352
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 62/151 (41%)
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q R + VY +++ T AK + M ++ ++ Y + ++
Sbjct: 127 QWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLR 186
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ M GI+PD+ I NT VL +++++A + + MQ + + TY I
Sbjct: 187 NAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLI 246
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
G C + +A EL + C D +Y
Sbjct: 247 KGYCDLHRLEDAXELIAEMPFKGCSPDKISY 277
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 191/388 (49%), Gaps = 30/388 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N + L + +++ + G P+++TYN+L+ CK +V +
Sbjct: 144 PSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKL 203
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P+AV++T++I +C + E L + EP V YN LINGL +
Sbjct: 204 LVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNALINGLCK 258
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
E +G A EL +M ++ I+P+V++Y+++I C +
Sbjct: 259 -------------------EHDYKG----AFELMREMVEKGISPNVISYSTLINVLCNSG 295
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ-IGVRPNAFVY 253
A L +M+ +G PN+ T + ++ G +A L + MI+ G++PN Y
Sbjct: 296 QIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAY 355
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
NTL+ GFC G + +A +F ME +GC+ + +Y LING+ K ++GA+ ++ +ML+
Sbjct: 356 NTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLT 415
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
G P+VV+Y + L + + A L + M ++ A T+ FI GLC +
Sbjct: 416 SGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDW 475
Query: 374 AVELFRTL-RILKCELDIRAYNCLIDGL 400
A ++FR + + +C +I YN L+DGL
Sbjct: 476 AEKVFRQMEQQHRCPPNIVTYNELLDGL 503
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 176/372 (47%), Gaps = 18/372 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N L L K Y L + + G+ P++ +Y+ LIN C G++ F
Sbjct: 244 PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSF 303
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPNVFTYNTLINGLY 133
L ++L+ PN T +SL+KG +A L+ ++ R FG +PNV YNTL+ G
Sbjct: 304 LTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFC 363
Query: 134 RTGHTIVALNLFEEM------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G+ + A+++F M S F G +D A ++ +M P+VV
Sbjct: 364 SHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVV 423
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
YT+++ C + + EA+ L+ M + P+V TFN + LC G++D A ++ M
Sbjct: 424 VYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 483
Query: 242 IQIG-VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
Q PN YN L+DG R+ A L + G + +Y+ L++G C N
Sbjct: 484 EQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSC-NAG 542
Query: 301 IEG-ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ--RDGVAADTWT 357
+ G AL L G+M+ G PD + N + + + + ERA ++ D + R D +
Sbjct: 543 LPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVIS 602
Query: 358 YRTFIDGLCKNS 369
Y I GLC+++
Sbjct: 603 YTNVIWGLCRSN 614
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 152/338 (44%), Gaps = 16/338 (4%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
+++ GC + +D + + + GL P++ YN L+ FC G + V +
Sbjct: 321 SLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEE 380
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
+PN T+ SLI G + A ++ K+ GC PNV Y ++ L R
Sbjct: 381 IGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKE 440
Query: 141 ALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDEN-INPDVVTYTSVI 187
A +L E M+ N V F +D A+++F QM+ ++ P++VTY ++
Sbjct: 441 AESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELL 500
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
G AN EA L E+ +GV+ + T+N ++ C G A +L+ M+ G
Sbjct: 501 DGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKS 560
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKEL--FVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
P+ N ++ +C G+ RA ++ VS V SY+ +I G C++ E +
Sbjct: 561 PDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGV 620
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
L M+S GI P + ++ L + F + + RA F
Sbjct: 621 ILLERMISAGIVPSIATWSVL-INCFILDDIVRAHDQF 657
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 134/339 (39%), Gaps = 79/339 (23%)
Query: 140 VALNLFEEMASGN-------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
+AL+ F+ +A+ N + ++G VD + L QMK + + + SV
Sbjct: 58 LALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISV 117
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I + A + + + G P+V +N ++D L ++ + M + G
Sbjct: 118 ISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGF 177
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI---------------- 290
PN F YN L+ C +V+ AK+L V M + GC SY+
Sbjct: 178 EPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE 237
Query: 291 --------------LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
LING CK + +GA L EM+ KGI P+V+ Y+TL VL Q+
Sbjct: 238 LAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQI 297
Query: 337 ERAFKLFDEMQRDGV----------------------AADTW--------------TYRT 360
E AF +M + G A D W Y T
Sbjct: 298 ELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNT 357
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ G C + IV+AV +F + + C +IR Y LI+G
Sbjct: 358 LVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLING 396
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 5/185 (2%)
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
+TF V++ +L +G++D LL M G + ++ +++ + G RA E+F
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
++ GC +V Y+ +++ I+ +Y +M G +P+V YN L L + ++
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
V+ A KL EM G D +Y T I +C+ + E EL E + YN
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNA 251
Query: 396 LIDGL 400
LI+GL
Sbjct: 252 LINGL 256
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 110/273 (40%), Gaps = 31/273 (11%)
Query: 158 EGFVDKAKELFLQMKDENI-NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
E V A F + + N+ +T+ +IR + + LL +M QG +
Sbjct: 53 ESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSED 112
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
F ++ + G + A + + + G P+ +YN ++D R+ ++ M
Sbjct: 113 LFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDM 172
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI--- 333
+ G VF+Y++L+ CKN +++GA L EM +KG PD V Y T+ + E+
Sbjct: 173 KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLV 232
Query: 334 ---------------------------HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
H + AF+L EM G++ + +Y T I+ LC
Sbjct: 233 KEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLC 292
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ I A + C +I + L+ G
Sbjct: 293 NSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKG 325
>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
Length = 826
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 190/433 (43%), Gaps = 47/433 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG-------- 66
P + +N L KN + LFK L G P + TY +IN FCK G
Sbjct: 235 PNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKL 294
Query: 67 ----------------------RVSHGFVV-----LGRILRSCFTPNAVTFTSLIKGLCA 99
R HG + + ++ S P+ T+ +LI G C+
Sbjct: 295 LVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCS 354
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG--- 156
+ ++ EA L G PN F+Y LI+ + G + A L EM+
Sbjct: 355 KGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIA 414
Query: 157 ---------VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
V G VD A + +M + I PD Y ++ G C + AK LL+EM+
Sbjct: 415 YGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEML 474
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
DQ V P+ ++D ++G +DEA +L L I+ G+ + N ++ G+C G +N
Sbjct: 475 DQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMN 534
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A F M + + F+YS +I+GY K ++ GAL ++G ML K KP+VV + +L
Sbjct: 535 DALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLI 594
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
+ RA K+F+EM+ G + TY I CK + +A F + I KC
Sbjct: 595 NGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCI 654
Query: 388 LDIRAYNCLIDGL 400
+ +N L++GL
Sbjct: 655 PNDATFNYLVNGL 667
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 178/398 (44%), Gaps = 30/398 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+++ ++++ P V + N L L + + ++ + D YT I+
Sbjct: 153 LYNTVIDVHNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGL 212
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G+V G ++ + PN V + +LI G C I A LF +L+V G P V
Sbjct: 213 CKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTV 272
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TY +IN + G FE VDK L ++MK+ + +
Sbjct: 273 KTYGAMINAFCKKGK-------FEA-------------VDK---LLVEMKERGLAVSLQI 309
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ +I EA + M++ G +P++ T+N +++ C GK+ EA LL+ I
Sbjct: 310 FNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAI 369
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ PN F Y L+ F G RA EL + M G T + +Y L++G E++
Sbjct: 370 RRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVD 429
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL++ +M+ +GI PD IYN L L + + A +L EM V D + T +
Sbjct: 430 VALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLV 489
Query: 363 DGLCKNSYIVEAVELFR-------TLRILKCELDIRAY 393
DG ++ + EA +LF+ +++C I+ Y
Sbjct: 490 DGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGY 527
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 162/375 (43%), Gaps = 23/375 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S+ L +KN Y L ++ G DL Y L++ G V V
Sbjct: 375 PNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTV 434
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ P+A + L+ GLC + R A L ++ P+ F TL++G R
Sbjct: 435 RDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIR 494
Query: 135 TGHTIVALNLFE-EMASGNGEFGVE-----------GFVDKAKELFLQMKDENINPDVVT 182
G+ A LF+ + G VE G ++ A F +M + +PD T
Sbjct: 495 HGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFT 554
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+++I G+ ND A + M+ + +PNVVTF +++ C+NG ++ A ++ + M
Sbjct: 555 YSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMR 614
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G PN Y L+ FC G++ +A F M C +++ L+NG N I
Sbjct: 615 SFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIA 674
Query: 303 GA-----------LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
+ L +G M+S G + YN++ + L + V+ A +L D+M G
Sbjct: 675 ISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGF 734
Query: 352 AADTWTYRTFIDGLC 366
D ++ + GLC
Sbjct: 735 PPDPVSFIALLHGLC 749
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 143/333 (42%), Gaps = 21/333 (6%)
Query: 85 PNAVTFTSLIKGLCAESRIMEAAALF-TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALN 143
P + +I + EA L+ T + V C P+VF N+L+N L G +A
Sbjct: 129 PTCEALSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLLVHHGKVEIARK 188
Query: 144 LFEEMASGNGEFG------------VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
+++EM NG+ EG V++ + L + + P++V Y ++I G+C
Sbjct: 189 VYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYC 248
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
D A L E+ +G P V T+ +++ CK GK + +LL M + G+ +
Sbjct: 249 KNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQ 308
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEM 311
++N ++D G A + M GC + +Y+ LING C ++ A L
Sbjct: 309 IFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHA 368
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
+ +G+ P+ Y L + + RA +L EM G D Y + GL +
Sbjct: 369 IRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLV----V 424
Query: 372 VEAVELFRTLRILKCEL----DIRAYNCLIDGL 400
V++ T+R E D YN L+ GL
Sbjct: 425 AGEVDVALTVRDKMMERGILPDANIYNVLMSGL 457
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 140/321 (43%), Gaps = 48/321 (14%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
ML+ +P + ++ G + ++ + D LF+ G+ + N +I +CK G
Sbjct: 473 MLDQNVTPDAFVNATLVDGFI-RHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYG 531
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
++ + R+ +P+ T++++I G ++ + A +F + C+PNV T+
Sbjct: 532 MMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFT 591
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
+LING R G A +FEEM S FG E P+VVTYT +
Sbjct: 592 SLINGFCRNGDLNRAEKVFEEMRS----FGFE-------------------PNVVTYTIL 628
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I FC +A +M+ PN TFN +++ L N + +S+
Sbjct: 629 IGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSK---------- 678
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
R N+ + N E F M S G + +Y+ ++ C++K ++ AL
Sbjct: 679 RSNS--------------QPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQ 724
Query: 307 LYGEMLSKGIKPDVVIYNTLF 327
L+ +M+SKG PD V + L
Sbjct: 725 LHDKMMSKGFPPDPVSFIALL 745
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 105/234 (44%), Gaps = 1/234 (0%)
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD-QGVQPNVVTFNVIMDEL 225
L MK + + P + VI + + EA L ++D P+V N +++ L
Sbjct: 118 LLETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLL 177
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
+GK++ A ++ D M+ + + + G C G+V + L GC +
Sbjct: 178 VHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNI 237
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
Y+ LI+GYCKN +IE A L+ E+ KG P V Y + + + E KL E
Sbjct: 238 VFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVE 297
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
M+ G+A + ID K+ +EA + R + CE D+ YN LI+G
Sbjct: 298 MKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLING 351
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 113/265 (42%), Gaps = 33/265 (12%)
Query: 40 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
FKR+ + PD +TY+ +I+ + K + + G +L+ PN VTFTSLI G C
Sbjct: 540 FKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCR 599
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG-------- 151
+ A +F ++R FG EPNV TY LI + G A FE+M
Sbjct: 600 NGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDAT 659
Query: 152 -----NGEFGVEGFVDKAK----------ELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
NG G +K E F M + + + Y S++ C
Sbjct: 660 FNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMV 719
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-----DLMIQIGVRPNAF 251
A L +MM +G P+ V+F ++ LC G++ + + ++ + +QI V+
Sbjct: 720 KPALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQDWNNVIPCNFNERQLQIAVK---- 775
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSM 276
Y+ +D F G + A L ++
Sbjct: 776 -YSEKLDQFLSEGLTSDASLLLQTL 799
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%)
Query: 30 NKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVT 89
N + L F + S G + YN ++ C C+ V + +++ F P+ V+
Sbjct: 681 NSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVS 740
Query: 90 FTSLIKGLCAESRIME 105
F +L+ GLC E R+ +
Sbjct: 741 FIALLHGLCLEGRLQD 756
>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 199/420 (47%), Gaps = 49/420 (11%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
+ K K + V +LN L P+ TY+ L++ +CK+G++ +VL ++ + PN
Sbjct: 439 VGKTKEAEEVFETILKLN---LAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPN 495
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
+TF+S+I G + + +A + ++ PN Y LI+G ++ G VA + +
Sbjct: 496 VITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCK 555
Query: 147 EMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
EM S E G +D+A+ L + M + I+PD+V Y S+I G+
Sbjct: 556 EMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEG 615
Query: 195 DWNEAKCLLIEMMDQ----------------------------------GVQPNVVTFNV 220
+ A ++ EM ++ G+ P+ +T+N
Sbjct: 616 NQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNT 675
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
I++ C GK ++A +L+ M G+ PNA YN L+ G C TG V +A+ M M
Sbjct: 676 IINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVME 735
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
T ++ L+ Y ++++ + L ++ ++++ G++ + +YNTL V + +A
Sbjct: 736 FVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAK 795
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ DEM + G++AD TY I G C S++ +A++ + + + +I YN L+ GL
Sbjct: 796 VVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGL 855
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 164/332 (49%), Gaps = 12/332 (3%)
Query: 48 LFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA 107
L P L TY LI +CK V + +++ + P+ VT +S++ G C ++ EAA
Sbjct: 317 LQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAA 376
Query: 108 ALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE--------- 158
LF ++ G +PN +Y T+IN L+++G + A NL +M F +
Sbjct: 377 VLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGL 436
Query: 159 ---GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNV 215
G +A+E+F + N+ P+ VTY++++ G+C A+ +L +M + V PNV
Sbjct: 437 FKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNV 496
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
+TF+ I++ K G + +A +L M+Q V PN VY L+DG+ G + A +
Sbjct: 497 ITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKE 556
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
M+S + + IL+N + ++ A SL +M SKGI PD+V Y +L F+
Sbjct: 557 MKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGN 616
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
A + EM+ + D Y I GL +
Sbjct: 617 QLAALSIVQEMKEKNIRFDVVAYNALIKGLLR 648
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 196/398 (49%), Gaps = 13/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++ L K + SL+K++ G+ PD+ T + ++ FC+ G+++ V+
Sbjct: 319 PTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVL 378
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ PN V++ ++I L R+MEA L +++ V G ++ T T+++GL++
Sbjct: 379 FREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFK 438
Query: 135 TGHTIVALNLFEEMASGNGEFG-------VEGFVDKAK----ELFLQ-MKDENINPDVVT 182
G T A +FE + N ++G+ K EL LQ M+ E++ P+V+T
Sbjct: 439 VGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVIT 498
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
++S+I G+ ++A +L EM+ + V PN + + +++D K G+ D A M
Sbjct: 499 FSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMK 558
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ + +++ L++ GR++ A+ L + M S G + +Y+ LI+GY K
Sbjct: 559 SRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQL 618
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
ALS+ EM K I+ DVV YN L L + + + + + M G+A D TY T I
Sbjct: 619 AALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRY-VCSRMIELGLAPDCITYNTII 677
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ C +A+++ ++ + YN LI GL
Sbjct: 678 NTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGL 715
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 182/381 (47%), Gaps = 4/381 (1%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N + + D L + GL D T NIL+ +C++G V + V+ +
Sbjct: 164 TYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNL 223
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ T + + +LI G C + +A L + ++ TYNTL+ +TG
Sbjct: 224 VDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDL 283
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
A +LF E+ F + K ++ Q + +N+ P +VTYT++I +C E
Sbjct: 284 TRAESLFNEILG----FWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEE 339
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
+ L +M+ G+ P+VVT + I+ C++GK+ EA+ L M ++G+ PN Y T+++
Sbjct: 340 SHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIIN 399
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
+GRV A L M G + + + + +++G K + + A ++ +L + P
Sbjct: 400 SLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAP 459
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
+ V Y+ L ++ ++E A + +M+++ V + T+ + I+G K + +AV++
Sbjct: 460 NCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVL 519
Query: 379 RTLRILKCELDIRAYNCLIDG 399
R + + Y LIDG
Sbjct: 520 REMVQRNVMPNTIVYAILIDG 540
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 130/257 (50%), Gaps = 20/257 (7%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
D ML M P P+ + L ++++ D +L + ++L ++GL L YN LI FC
Sbjct: 728 LDEMLVMEFVPTPI-THKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFC 786
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
++G VVL +++ + + VT+ +LI+G C S + +A ++++ V G PN+
Sbjct: 787 RLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNIT 846
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
TYNTL+ GL G + E++ S +M + + P+ TY
Sbjct: 847 TYNTLLGGLSNAGLMEEMMEETEKLVS-------------------EMNERGLVPNAATY 887
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
++ G+ + + L IEM+ +G P + T+NV++ + K+GKM EA LL+ ++
Sbjct: 888 DILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLT 947
Query: 244 IGVRPNAFVYNTLMDGF 260
G PN+F Y+ L G+
Sbjct: 948 KGRIPNSFTYDILTCGW 964
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 174/384 (45%), Gaps = 20/384 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++ L K + LS+ + + + D+ YN LI ++G+ +V
Sbjct: 599 PDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVC 658
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R++ P+ +T+ ++I C + + +A + +++ +G PN TYN LI GL +
Sbjct: 659 -SRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCK 717
Query: 135 TGHTIVALNLFEEM-------ASGNGEFGVEGF-----VDKAKELFLQMKDENINPDVVT 182
TG A + +EM +F V+ + DK ++ ++ + +
Sbjct: 718 TGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTV 777
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I FC +AK +L EM+ +G+ ++VT+N ++ C +++A + M
Sbjct: 778 YNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMF 837
Query: 243 QIGVRPNAFVYNTLMDGFCLTG----RVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
G+ PN YNTL+ G G + ++L M G +Y IL++GY +
Sbjct: 838 VDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRV 897
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+ + L+ EM++KG P + YN L + ++ A +L +++ G +++TY
Sbjct: 898 GNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTY 957
Query: 359 RTFIDGLCKNSYIVEAVELFRTLR 382
G SY E+ R+L+
Sbjct: 958 DILTCGWLNLSY---EPEIDRSLK 978
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 163/353 (46%), Gaps = 35/353 (9%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRS-CFTPNAVTFTSLIKGLCAESRIME 105
G+ PD+++ N+L++ CK+G + + LG + + + VT+ ++I G C + + +
Sbjct: 124 GVVPDVFSVNVLVHSLCKVGDLD---LALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQ 180
Query: 106 AAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV-------- 157
L +++ G + T N L+ G R G A + + G V
Sbjct: 181 GFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLID 240
Query: 158 ----EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD----- 208
G + +A EL ++ D+VTY ++++ FC D A+ L E++
Sbjct: 241 GYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDE 300
Query: 209 --------------QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ +QP +VT+ ++ CK ++E+ L MI G+ P+ +
Sbjct: 301 DRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCS 360
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+++ GFC G++ A LF M MG SY+ +IN K+ + A +L +M+ +
Sbjct: 361 SILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVR 420
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK 367
GI D+V T+ LF++ + + A ++F+ + + +A + TY +DG CK
Sbjct: 421 GISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCK 473
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 160/355 (45%), Gaps = 35/355 (9%)
Query: 81 SCFTPNAVT------FTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
S F P T F +LI+ R A+A F+ +R G P + +NTL+
Sbjct: 47 SIFIPPTKTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNA 106
Query: 135 TGHTIVALNLFEEM---ASGNGEFGVEGFVD---KAKELFLQM----KDENINPDVVTYT 184
+G ++ +M F V V K +L L + ++ ++ D VTY
Sbjct: 107 SGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDIDNVTYN 166
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+VI GFC ++ LL EM+ +G+ + +T N+++ C+ G + A ++ ++
Sbjct: 167 TVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDG 226
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
GV + NTL+DG+C G +++A EL + + +Y+ L+ +CK ++ A
Sbjct: 227 GVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRA 286
Query: 305 LSLYGEMLS-------------------KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
SL+ E+L K ++P +V Y TL + VE + L+ +
Sbjct: 287 ESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKK 346
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
M +G+ D T + + G C++ + EA LFR + + + + +Y +I+ L
Sbjct: 347 MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSL 401
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 168/356 (47%), Gaps = 12/356 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P SF+ L L K L++F+ + GL D+ N LI+C C++G + +
Sbjct: 45 PNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRL 104
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + F + T++ L+ L R +A +F+ ++ GC P+ YN LI+ L +
Sbjct: 105 LHHMTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGK 164
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G AL L E+M G +KA F MK +PDVVT
Sbjct: 165 QGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVT 224
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++ G +EA L EM P++ TF ++D L K G+M++A ++
Sbjct: 225 YNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLV 284
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
++G PN+++YN L+ GFC +G+V++ ELF M C +Y+IL+ G+ +
Sbjct: 285 KMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTS 344
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
A+ L EM+ +G P + YN L L QVE A+ LF EM G D TY
Sbjct: 345 MAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTY 400
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 160/352 (45%), Gaps = 26/352 (7%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILR--SCFTPNAVTFTSLIKGLCAESRIMEAA 107
PD+ YN LI +CK G + R+ + SC PNAV+F +L+ LC SR +A
Sbjct: 9 PDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSC-KPNAVSFDTLVIFLCKMSRATDAL 67
Query: 108 ALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKEL 167
A+F ++ G + +V NTLI+ R G + +A+ L
Sbjct: 68 AVFQEMLGAGLQADVNVCNTLIHCTCRLG-----------------------MLRQARRL 104
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
M DV TY+ ++ A +A + M G P+ V +NV++ L K
Sbjct: 105 LHHMTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGK 164
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
GK+DEA LL+ M + G+ P+ YN ++D GR +A F M+ + V +
Sbjct: 165 QGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVT 224
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y+ L+NG K + + A L+ EM + PD+ + TL L + ++E A + +
Sbjct: 225 YNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLV 284
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ G +++ Y I G C++ + + ELF+ + C D Y L+ G
Sbjct: 285 KMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLG 336
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 139/284 (48%), Gaps = 24/284 (8%)
Query: 118 CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDE-NI 176
C P+V YNTLI G + +G+G D+A ++F ++K E +
Sbjct: 7 CAPDVVAYNTLIAGYCK---------------AGDG--------DRALDMFRRLKQEGSC 43
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
P+ V++ +++ C + +A + EM+ G+Q +V N ++ C+ G + +A R
Sbjct: 44 KPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARR 103
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
LL M + F Y+ LMD GR +A E+F +M+ GC Y++LI+
Sbjct: 104 LLHHMTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLG 163
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K +++ AL L +M KGI PD YN + VL + E+A+ F M+R + D
Sbjct: 164 KQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVV 223
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY T ++GL K EA +LF ++ KC D+ + LID L
Sbjct: 224 TYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTL 267
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 126/287 (43%), Gaps = 23/287 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +N+L CL K D L L + +N G+ PD TYNI+I+ GR +
Sbjct: 150 PDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSF 209
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
G + R +P+ VT+ +L+ GL R EA LF +++ C P++ T+ TLI+ L +
Sbjct: 210 FGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAK 269
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G E+ + G V P+ Y ++I GFC +
Sbjct: 270 AGR-------MEDALEQSARLVKMGHV----------------PNSYIYNALISGFCRSG 306
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
++ L +M++ P+ +T+ +++ + G A LL M++ G P YN
Sbjct: 307 QVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYN 366
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
L+ + G+V A LF M + G + +YS L N NK +
Sbjct: 367 VLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPNLSTPNKSV 413
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 110/249 (44%), Gaps = 23/249 (9%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+N + P ++NI+ L+ Y+ S F + PD+ TYN L+N K+ R
Sbjct: 178 MNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRR 237
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ + + P+ TF +LI L R+ +A +L G PN + YN
Sbjct: 238 TDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNA 297
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
LI+G R+G VDK ELF M + + PD +TYT ++
Sbjct: 298 LISGFCRSGQ-----------------------VDKGYELFQDMIECSCFPDSITYTILV 334
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
GF + A LL EM+ +G P + T+NV++ L G++++A L MI G
Sbjct: 335 LGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFN 394
Query: 248 PNAFVYNTL 256
P+ Y+ L
Sbjct: 395 PDMQTYSAL 403
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 91/215 (42%), Gaps = 23/215 (10%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ R P V ++N L L K + D LF + + PDL T+ LI+ K G
Sbjct: 212 MMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAG 271
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
R+ R+++ PN+ + +LI G C ++ + LF + C P+ TY
Sbjct: 272 RMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYT 331
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
L+ G R GHT +A+ L +EM E P + TY +
Sbjct: 332 ILVLGFSRRGHTSMAMELLQEMVR-----------------------EGHTPALATYNVL 368
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
IR A +A L EM+ +G P++ T++ +
Sbjct: 369 IRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG-IKPDVVIYNTLFVVLFEIHQ 335
E+ C V +Y+ LI GYCK + + AL ++ + +G KP+ V ++TL + L ++ +
Sbjct: 3 ETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSR 62
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
A +F EM G+ AD T I C+ + +A L + LD+ Y+
Sbjct: 63 ATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSY 122
Query: 396 LIDGL 400
L+D L
Sbjct: 123 LMDAL 127
>gi|413939576|gb|AFW74127.1| hypothetical protein ZEAMMB73_460696 [Zea mays]
Length = 581
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 176/365 (48%), Gaps = 46/365 (12%)
Query: 38 SLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 97
++ R+++ G+ D ++YN +I +C+ G R+ + P+ VT+ S I GL
Sbjct: 199 AIVTRMDAAGVTLDRFSYNTVIALYCRKGMGYEAMCARDRMDKEGIRPDTVTWNSSIHGL 258
Query: 98 CAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV 157
C E R+ EAA LFT++ P+ TY TLI+G R G+
Sbjct: 259 CKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGN-------------------- 298
Query: 158 EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
V++A +L +M+ + P V TY +++R C + E LL EM + VQ + VT
Sbjct: 299 ---VEEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADHVT 355
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
N +++ CK G M A ++ M++ G++ N F Y L+ GFC ++ AKE F M
Sbjct: 356 CNTLINAYCKRGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKARELDGAKEAFFQMV 415
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
G + +S L++G+CK + L++ E++ +G+ PD +Y +L L V+
Sbjct: 416 DAGFSPNYSVFSWLVDGFCKKNNADAVLAIPDELMKRGLPPDKAVYRSLIRRLCRKGLVD 475
Query: 338 RAFKLFDEMQRDGVAADTWTYRTF----------------IDGLCKNSYIVEAVELFRTL 381
+A ++FD+MQ G+ D+ Y T +DG+ KN +L+ T
Sbjct: 476 QAQRVFDQMQSKGLVGDSLVYATLAYTYLTKGNPTAALNTLDGMTKN-------QLYITP 528
Query: 382 RILKC 386
+I C
Sbjct: 529 QIYNC 533
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 176/380 (46%), Gaps = 24/380 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD+M R P + L LA+ + T +F + GL + YN +++
Sbjct: 130 VFDHM-RARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAATTHVYNAMLHVC 188
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K G + ++ R+ + T + ++ ++I C + EA ++ G P+
Sbjct: 189 LKAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYCRKGMGYEAMCARDRMDKEGIRPDT 248
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
T+N+ I+GL + EG V +A +LF +M PD VT
Sbjct: 249 VTWNSSIHGLCK-----------------------EGRVKEAAQLFTEMVAAQATPDNVT 285
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT++I G+C A + EA L M G+ P V T+N I+ +LC++G M E RLL M
Sbjct: 286 YTTLIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMD 345
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
V+ + NTL++ +C G + A ++ M G F+Y LI+G+CK +E++
Sbjct: 346 GRKVQADHVTCNTLINAYCKRGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKARELD 405
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
GA + +M+ G P+ +++ L + + + + DE+ + G+ D YR+ I
Sbjct: 406 GAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLAIPDELMKRGLPPDKAVYRSLI 465
Query: 363 DGLCKNSYIVEAVELFRTLR 382
LC+ + +A +F ++
Sbjct: 466 RRLCRKGLVDQAQRVFDQMQ 485
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 141/319 (44%), Gaps = 25/319 (7%)
Query: 33 YDTVLSLF-------------KRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
Y+TV++L+ R++ G+ PD T+N I+ CK GRV + ++
Sbjct: 216 YNTVIALYCRKGMGYEAMCARDRMDKEGIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMV 275
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+ TP+ VT+T+LI G C + EA L ++ G P V TYN ++ L G+
Sbjct: 276 AAQATPDNVTYTTLIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMK 335
Query: 140 VALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
L EM + + G + A ++ +M + + + TY ++I
Sbjct: 336 EVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMTSACKVKKKMMESGLQLNHFTYKALI 395
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
GFC A + + AK +M+D G PN F+ ++D CK D + D +++ G+
Sbjct: 396 HGFCKARELDGAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLAIPDELMKRGLP 455
Query: 248 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSL 307
P+ VY +L+ C G V++A+ +F M+S G Y+ L Y AL+
Sbjct: 456 PDKAVYRSLIRRLCRKGLVDQAQRVFDQMQSKGLVGDSLVYATLAYTYLTKGNPTAALNT 515
Query: 308 YGEMLSKGIKPDVVIYNTL 326
M + IYN L
Sbjct: 516 LDGMTKNQLYITPQIYNCL 534
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 135/315 (42%), Gaps = 25/315 (7%)
Query: 85 PNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNL 144
P+ ++ L+ L +R +A +F +R G P+ L+ L R T A +
Sbjct: 108 PHVPSWLVLV--LAQSARPHDAVRVFDHMRARGLAPDAHACTALLTALARARMTATARRV 165
Query: 145 FEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
F+EMA + Y +++ A D +A+ ++
Sbjct: 166 FDEMARAG-----------------------LAATTHVYNAMLHVCLKAGDAAQAEAIVT 202
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
M GV + ++N ++ C+ G EA D M + G+RP+ +N+ + G C G
Sbjct: 203 RMDAAGVTLDRFSYNTVIALYCRKGMGYEAMCARDRMDKEGIRPDTVTWNSSIHGLCKEG 262
Query: 265 RVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
RV A +LF M + T +Y+ LI+GYC+ +E A+ L G M + G+ P V YN
Sbjct: 263 RVKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYN 322
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
+ L E ++ +L EM V AD T T I+ CK + A ++ + +
Sbjct: 323 AILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMTSACKVKKKMMES 382
Query: 385 KCELDIRAYNCLIDG 399
+L+ Y LI G
Sbjct: 383 GLQLNHFTYKALIHG 397
>gi|358346363|ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503173|gb|AES84376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 199/406 (49%), Gaps = 35/406 (8%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
+ K K + V +LN L P+ TY+ L++ +CK+G++ +VL ++ + PN
Sbjct: 93 VGKTKEAEEVFETILKLN---LAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPN 149
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
+TF+S+I G + + +A + ++ PN Y LI+G ++ G VA + +
Sbjct: 150 VITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCK 209
Query: 147 EMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
EM S E G +D+A+ L + M + I+PD+V Y S+I G+
Sbjct: 210 EMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEG 269
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA---SRLLDL----------- 240
+ A ++ EM ++ ++ +VV +N ++ L + GK D SR+++L
Sbjct: 270 NQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDA 329
Query: 241 ------MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
M G+ PNA YN L+ G C TG V +A+ M M T ++ L+
Sbjct: 330 LDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKA 389
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
Y ++++ + L ++ ++++ G++ + +YNTL V + +A + DEM + G++AD
Sbjct: 390 YSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISAD 449
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY I G C S++ +A++ + + + +I YN L+ GL
Sbjct: 450 LVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGL 495
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 175/360 (48%), Gaps = 32/360 (8%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G+ PD+ T + ++ FC+ G+++ V+ + PN V++ ++I L R+MEA
Sbjct: 5 GIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEA 64
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG-------VEG 159
L +++ V G ++ T T+++GL++ G T A +FE + N ++G
Sbjct: 65 FNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDG 124
Query: 160 FVDKAK----ELFLQ-MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPN 214
+ K EL LQ M+ E++ P+V+T++S+I G+ ++A +L EM+ + V PN
Sbjct: 125 YCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPN 184
Query: 215 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
+ + +++D K G+ D A M + + +++ L++ GR++ A+ L +
Sbjct: 185 TIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLII 244
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
M S G + +Y+ LI+GY K ALS+ EM K I+ DVV YN L L +
Sbjct: 245 DMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLG 304
Query: 335 --------------------QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
+ E A + +EM+ G+ + TY I GLCK + +A
Sbjct: 305 KYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKA 364
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 130/257 (50%), Gaps = 20/257 (7%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
D ML M P P+ + L ++++ D +L + ++L ++GL L YN LI FC
Sbjct: 368 LDEMLVMEFVPTPI-THKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFC 426
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
++G VVL +++ + + VT+ +LI+G C S + +A ++++ V G PN+
Sbjct: 427 RLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNIT 486
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
TYNTL+ GL G + E++ S +M + + P+ TY
Sbjct: 487 TYNTLLGGLSNAGLMEEMMEETEKLVS-------------------EMNERGLVPNAATY 527
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
++ G+ + + L IEM+ +G P + T+NV++ + K+GKM EA LL+ ++
Sbjct: 528 DILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLT 587
Query: 244 IGVRPNAFVYNTLMDGF 260
G PN+F Y+ L G+
Sbjct: 588 KGRIPNSFTYDILTCGW 604
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 174/399 (43%), Gaps = 39/399 (9%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
F+IL L + D SL + S G+ PD+ Y LI+ + K G ++ +
Sbjct: 223 FDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMK 282
Query: 80 RSCFTPNAVTFTSLIKGLCAE---------SRIME-----------AAALFTKLRVFGCE 119
+ V + +LIKGL SR++E A + +++ +G
Sbjct: 283 EKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIM 342
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEM-------ASGNGEFGVEGF-----VDKAKEL 167
PN TYN LI GL +TG A + +EM +F V+ + DK ++
Sbjct: 343 PNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQI 402
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
++ + + Y ++I FC +AK +L EM+ +G+ ++VT+N ++ C
Sbjct: 403 HEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCT 462
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG----RVNRAKELFVSMESMGCTH 283
+++A + M G+ PN YNTL+ G G + ++L M G
Sbjct: 463 GSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVP 522
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
+Y IL++GY + + + L+ EM++KG P + YN L + ++ A +L
Sbjct: 523 NAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELL 582
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
+++ G +++TY G SY E+ R+L+
Sbjct: 583 NDLLTKGRIPNSFTYDILTCGWLNLSY---EPEIDRSLK 618
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 100/194 (51%)
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M+ G+ P+VVT + I+ C++GK+ EA+ L M ++G+ PN Y T+++ +GR
Sbjct: 1 MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 60
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
V A L M G + + + + +++G K + + A ++ +L + P+ V Y+
Sbjct: 61 VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSA 120
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L ++ ++E A + +M+++ V + T+ + I+G K + +AV++ R +
Sbjct: 121 LLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRN 180
Query: 386 CELDIRAYNCLIDG 399
+ Y LIDG
Sbjct: 181 VMPNTIVYAILIDG 194
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%)
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M+ GI PDVV +++ ++ A LF EM G+ + +Y T I+ L K+
Sbjct: 1 MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 60
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++EA L + + DI ++DGL
Sbjct: 61 VMEAFNLQSQMVVRGISFDIVTCTTVMDGL 90
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 172/364 (47%), Gaps = 23/364 (6%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP FN+L + ++ + ++F + G+ P + T+N L++ CK ++
Sbjct: 241 PPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANA 300
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ G + ++ P+ T+ + ++GLC RI +A +F ++R G PN + TLI+
Sbjct: 301 LRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHC 360
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ G+ L L EMA+ I D+V Y ++ G C
Sbjct: 361 KEGNVAAGLELHREMAT-----------------------RGIKTDLVAYNALANGLCRV 397
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
D A ++ EM + G++P+ VT+ ++D CK G++D A + M GV + Y
Sbjct: 398 RDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTY 457
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
TL+ G +GR ++ + M G +Y+++I+ +CKN +++ L EM +
Sbjct: 458 TTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQN 517
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG KP VV YN + + Q++ A L + M GV D TY +DG CK+ + +
Sbjct: 518 KGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRD 577
Query: 374 AVEL 377
A EL
Sbjct: 578 AEEL 581
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 123/240 (51%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
V +A +LQ+ D + P+ + ++R + A+ + EM+ +GV P VVTFN
Sbjct: 225 VPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNT 284
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+M +CK ++ A+ L LM + GV P+ + Y M G C GR+ A E+F M G
Sbjct: 285 LMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERG 344
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
++ LI+ +CK + L L+ EM ++GIK D+V YN L L + ++ A
Sbjct: 345 VNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAAN 404
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +EM+ +G+ D TY T IDG CK + A+E+ + + LD Y LI GL
Sbjct: 405 DIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGL 464
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 140/297 (47%), Gaps = 23/297 (7%)
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVD 162
+ EA A + +L G P +N L+ + R+G A N+F+EM
Sbjct: 225 VPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLR------------ 272
Query: 163 KAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 222
+ P VVT+ +++ G C A+D N A L M GV P+V T+ M
Sbjct: 273 -----------RGVPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFM 321
Query: 223 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT 282
LCK G++ +A + + M + GV PN V+ TL+D C G V EL M + G
Sbjct: 322 QGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIK 381
Query: 283 HTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKL 342
+ +Y+ L NG C+ ++++ A + EM + G+KPD V Y TL + +++ A ++
Sbjct: 382 TDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEM 441
Query: 343 FDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
EM +GVA D TY T I GL K+ V++ + + E D Y +ID
Sbjct: 442 KQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDA 498
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 160/348 (45%), Gaps = 26/348 (7%)
Query: 52 LYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 111
L ++ L+N ++ V + ++L + P A F L++ + ++ A +F
Sbjct: 212 LPAWSDLMN---RLPSVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFD 268
Query: 112 KLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQM 171
++ G P V T+NTL++G+ + ++ S N + G + KA
Sbjct: 269 EMLRRGVPPTVVTFNTLMSGMCKA----------SDLNSANA---LRGLMAKA------- 308
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
+ PDV TY + ++G C A +A + EM ++GV PN V F ++D CK G +
Sbjct: 309 ---GVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNV 365
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
L M G++ + YN L +G C + A ++ M + G +Y+ L
Sbjct: 366 AAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTL 425
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I+G+CK E++ A+ + EM +G+ D V Y TL L + + + ++ EM G+
Sbjct: 426 IDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGL 485
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
D TY ID CKNS + +L + ++ + + YN +++G
Sbjct: 486 EPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNG 533
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++ ++ KN T L K + + G P + TYN+++N FC +G++ + ++
Sbjct: 487 PDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADML 546
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L P+ +T+ L+ G C ++ +A L + G + Y +LIN +
Sbjct: 547 LNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEELKS---AKGMVSDFGLYTSLINEFVK 603
Query: 135 TGHT 138
T
Sbjct: 604 KKST 607
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 183/390 (46%), Gaps = 31/390 (7%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
FN L + + + +F + S G+ P + T+N L+ K GR + V +L
Sbjct: 152 FNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEML 211
Query: 80 RS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ TP+ TF LI+G C + + +F L FGCEP+V TYNTL++GL R G
Sbjct: 212 STYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKV 271
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
VA N+ + M K ++NP+VVTYT++IRG+C + +
Sbjct: 272 TVAYNVVKGMGK---------------------KSVDLNPNVVTYTTLIRGYCAKREIEK 310
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV-RPNAFVYNTLM 257
A + EM++QG++ N +T+N ++ LC+ K ++ +L+ G P+ +NTLM
Sbjct: 311 ALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLM 370
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK--- 314
C G ++ A ++F M + +YS L+ C+ E A L ++L +
Sbjct: 371 HCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKIL 430
Query: 315 ----GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
G KP V YN +F L E + ++A K F ++ R G D +Y+T I G CK
Sbjct: 431 LSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGT-QDPPSYKTLIMGHCKEGT 489
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
EL + D Y LI+GL
Sbjct: 490 FESGYELLVLMLRKDFXPDFETYESLINGL 519
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 178/386 (46%), Gaps = 32/386 (8%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
++D ML+ P +FNIL N D +F L+ G PD+ TYN L++
Sbjct: 206 VYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGL 265
Query: 63 CKMGRVSHGF-VVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C+ G+V+ + VV G +S PN VT+T+LI+G CA+ I +A A+F ++ G +
Sbjct: 266 CRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKA 325
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
N TYNTLI GL ++ E A G+G F +PD
Sbjct: 326 NNITYNTLIKGLCEARKFEKIKDILEGTA-GDGTF---------------------SPDT 363
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
T+ +++ C+A + ++A + M + +QP+ T++ ++ LC+ G ++A LLD
Sbjct: 364 CTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDK 423
Query: 241 MIQI-------GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
+++ G +P YN + C TG+ +A++ F + G T SY LI
Sbjct: 424 LLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRG-TQDPPSYKTLIM 482
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
G+CK E L ML K PD Y +L L + + A + ++M R
Sbjct: 483 GHCKEGTFESGYELLVLMLRKDFXPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRP 542
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFR 379
++ T+ + + L + E+ L +
Sbjct: 543 NSSTFHSILAKLLEQGRASESASLIQ 568
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 164/375 (43%), Gaps = 33/375 (8%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLF-PDLYTYNILI 59
+F+ M+N + ++N L L + + ++ + + + G F PD T+N L+
Sbjct: 312 LAVFEEMVNQGLKANNI-TYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLM 370
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL---RVF 116
+C C G + V R+ P++ T+++L++ LC +A L KL ++
Sbjct: 371 HCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKIL 430
Query: 117 ----GCEPNVFTYNTLINGLYRTGHTIVALNLFEE-MASGNGE----------FGVEGFV 161
GC+P V YN + L TG T A F + M G + EG
Sbjct: 431 LSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTLIMGHCKEGTF 490
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
+ EL + M ++ PD TY S+I G + + A L +M+ +PN TF+ I
Sbjct: 491 ESGYELLVLMLRKDFXPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSI 550
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
+ +L + G+ E++ L+ LM+ +R N + G ++A +L + G
Sbjct: 551 LAKLLEQGRASESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYGKG- 609
Query: 282 THTVFSYSI----LINGYCK-NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
YS+ LI C K I+G+ L + S D+ + NT+ L EI+++
Sbjct: 610 ------YSVKMEELIRYLCHCRKVIQGSKLLLFSLESHQF-VDMDLCNTVIFQLCEINKL 662
Query: 337 ERAFKLFDEMQRDGV 351
AF L+ ++ GV
Sbjct: 663 SEAFSLYYKLVEMGV 677
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 6/222 (2%)
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
T+V++ + D ++A + G ++ +++ L +N ++ A L + +
Sbjct: 80 TTVLQTLGFLRDTSKALQFFNWAQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEK 139
Query: 244 IG---VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
V+ A +N+LM F G + ++F M+S G + +V +++ L+ K
Sbjct: 140 RSRGIVKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGR 199
Query: 301 IEGALSLYGEMLSK-GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
A +Y EMLS G+ PD +N L V+ F++F+++ R G D TY
Sbjct: 200 TNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYN 259
Query: 360 TFIDGLCKNSYIVEAVELFRTLRILKCEL--DIRAYNCLIDG 399
T +DGLC+ + A + + + +L ++ Y LI G
Sbjct: 260 TLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRG 301
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 113/276 (40%), Gaps = 18/276 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N +F L + F++L G D +Y LI CK G G+ +
Sbjct: 438 PLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGT-QDPPSYKTLIMGHCKEGTFESGYEL 496
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +LR F P+ T+ SLI GL + + A K+ PN T+++++ L
Sbjct: 497 LVLMLRKDFXPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLE 556
Query: 135 TGHTIVALNLFEEMASGNGE-------------FGVEGFVDKAKELFLQMKDENINPDVV 181
G + +L + M N FG G DKA +L + + + V
Sbjct: 557 QGRASESASLIQLMLDKNIRQNLSFSTGCVRLLFGA-GMNDKAFQLVHLLYGKGYS---V 612
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+IR C+ + LL+ ++ ++ N ++ +LC+ K+ EA L +
Sbjct: 613 KMEELIRYLCHCRKVIQGSKLLLFSLESHQFVDMDLCNTVIFQLCEINKLSEAFSLYYKL 672
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
+++GV N L G++ A+ + ME
Sbjct: 673 VEMGVHQQLSCQNQLKVSLKAGGKLEEAESVQKRME 708
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 185/382 (48%), Gaps = 12/382 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ +L L + D +F ++ + PD TY L++ F +
Sbjct: 293 PDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQF 352
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + P+ VTFT L+ LC EA A +R G PN+ TYNTLI GL R
Sbjct: 353 WSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLR 412
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
AL +F+ M S + +G G A E F +MK + I P++V
Sbjct: 413 VHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVA 472
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ + A EAK + + D G+ P+ VT+N++M K G++DEA +LL M+
Sbjct: 473 CNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMV 532
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ P+ V N+L++ RV+ A ++F+ M+ M TV +Y+ L+ G KN +I+
Sbjct: 533 ENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQ 592
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ L+ M+ KG P+ + +NTLF L + +V A K+ +M G D +TY T I
Sbjct: 593 EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 652
Query: 363 DGLCKNSYIVEAVELFRTLRIL 384
GL KN + EA+ F ++ L
Sbjct: 653 FGLVKNGQVKEAMCFFHQMKKL 674
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 196/421 (46%), Gaps = 58/421 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +++ L L K + ++V+ L K + + GL P++YT+ I I + G+++ + +
Sbjct: 223 PSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEI 282
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R+ P+ VT+T LI LC ++ A +F K++ +P+ TY TL++
Sbjct: 283 LKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLD---- 338
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
F +D + + +M+ + PDVVT+T ++ C A
Sbjct: 339 -------------------RFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAG 379
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
++ EA L M DQG+ PN+ T+N ++ L + ++D+A + D M +GV+P A+ Y
Sbjct: 380 NFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYI 439
Query: 255 TLMD-----------------------------------GFCLTGRVNRAKELFVSMESM 279
+D GR AK++F ++ +
Sbjct: 440 VFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDI 499
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G +Y++++ Y K EI+ A+ L EM+ +PDV++ N+L L++ +V+ A
Sbjct: 500 GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEA 559
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+K+F M+ + TY T + GL KN I EA+ELF + C + +N L D
Sbjct: 560 WKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDC 619
Query: 400 L 400
L
Sbjct: 620 L 620
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 182/390 (46%), Gaps = 12/390 (3%)
Query: 23 LFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSC 82
+F CL+ +++ G + Y+YN LI+ K + V R++
Sbjct: 161 IFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDG 220
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
F P+ T++SL+ GL I L ++ G +PNV+T+ I L R G A
Sbjct: 221 FRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAY 280
Query: 143 NLFEEMA-SGNGEFGVEGFV-----------DKAKELFLQMKDENINPDVVTYTSVIRGF 190
+ + M G G V V D AKE+F +MK PD VTY +++ F
Sbjct: 281 EILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRF 340
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
D + EM G P+VVTF +++D LCK G EA LD+M G+ PN
Sbjct: 341 SDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNL 400
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
YNTL+ G R++ A E+F +MES+G T ++Y + I+ Y K+ + AL + +
Sbjct: 401 HTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEK 460
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M +KGI P++V N L + + A ++F ++ G+ D+ TY + K
Sbjct: 461 MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE 520
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I EA++L + CE D+ N LI+ L
Sbjct: 521 IDEAIKLLSEMVENCCEPDVIVVNSLINTL 550
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 163/336 (48%), Gaps = 23/336 (6%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G+ P L TYN+LI + + V ++ + P+ T+ L+ +I E
Sbjct: 782 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDEL 841
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKE 166
++ ++ CEPN T+N +I+GL + G+ AL+L+ ++
Sbjct: 842 FEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDL------------------ 883
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
M D + +P TY +I G + EAK L M D G +PN +N++++
Sbjct: 884 ----MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFG 939
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
K G+ D A L M++ GVRP+ Y+ L+D C+ GRV+ F ++ G V
Sbjct: 940 KAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVV 999
Query: 287 SYSILINGYCKNKEIEGALSLYGEML-SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
Y+++ING K +E AL L+ EM S+GI PD+ YN+L + L VE A K+++E
Sbjct: 1000 CYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNE 1059
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+QR G+ + +T+ I G + A +++T+
Sbjct: 1060 IQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1095
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/472 (25%), Positives = 204/472 (43%), Gaps = 86/472 (18%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILI------------NC 61
PP +FN LF CL KN L + ++ G PD++TYN +I C
Sbjct: 607 PPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMC 666
Query: 62 F----------------------CKMGRVSHGFVVLGRILRSCFTP-------------- 85
F K G + + ++ L SC
Sbjct: 667 FFHQMKKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSIL 726
Query: 86 ------NAVTFTS--LIKGLCAESRIM---------------EAAALFTKL-RVFGCEPN 121
NAV+F+ + G+C + + A LF K + G +P
Sbjct: 727 AEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPK 786
Query: 122 VFTYNTLINGLYRTGHTIVALNLF---------EEMASGN---GEFGVEGFVDKAKELFL 169
+ TYN LI GL +A ++F ++A+ N +G G +D+ E++
Sbjct: 787 LPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYK 846
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM-DQGVQPNVVTFNVIMDELCKN 228
+M P+ +T+ VI G A + ++A L ++M D+ P T+ ++D L K+
Sbjct: 847 EMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKS 906
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G++ EA +L + M G RPN +YN L++GF G + A LF M G + +Y
Sbjct: 907 GRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTY 966
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
S+L++ C ++ L + E+ G+ PDVV YN + L + H++E A LF+EM++
Sbjct: 967 SVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKK 1026
Query: 349 D-GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G+ D +TY + I L + EA +++ ++ E ++ +N LI G
Sbjct: 1027 SRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1078
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 151/314 (48%), Gaps = 25/314 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L K+ D + ++K +++ P+ T+NI+I+ K G V +
Sbjct: 820 PDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDL 879
Query: 75 LGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
++ F+P A T+ LI GL R+ EA LF + +GC PN YN LING
Sbjct: 880 YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILING-- 937
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
FG G D A LF +M E + PD+ TY+ ++ C
Sbjct: 938 ---------------------FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMV 976
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI-GVRPNAFV 252
+E E+ + G+ P+VV +N+I++ L K +++EA L + M + G+ P+ +
Sbjct: 977 GRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYT 1036
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
YN+L+ + G V A +++ ++ G VF+++ LI GY + + E A ++Y M+
Sbjct: 1037 YNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMV 1096
Query: 313 SKGIKPDVVIYNTL 326
+ G P+ Y L
Sbjct: 1097 TGGFSPNTGTYEQL 1110
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 189/437 (43%), Gaps = 52/437 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L L KN + LF+ + G P+ T+N L +C CK V+ +
Sbjct: 573 PTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKM 632
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ P+ T+ ++I GL ++ EA F +++ P+ T TL+ G+ +
Sbjct: 633 LFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVK 691
Query: 135 TG-----HTIVA----------LNLFEE--MASGNGEFGVEGFVD--------------- 162
G + I+A NLF E M S E G++ V
Sbjct: 692 AGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGD 751
Query: 163 -----------------KAKELFLQM-KDENINPDVVTYTSVIRGFCYANDWNEAKCLLI 204
A+ LF + KD + P + TY +I G A+ A+ + +
Sbjct: 752 SILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFL 811
Query: 205 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 264
++ + G P+V T+N ++D K+GK+DE + M PN +N ++ G G
Sbjct: 812 QVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAG 871
Query: 265 RVNRAKELFVS-MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
V+ A +L+ M + T +Y LI+G K+ + A L+ M G +P+ IY
Sbjct: 872 NVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIY 931
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
N L + + + A LF M ++GV D TY +D LC + E + FR L+
Sbjct: 932 NILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKE 991
Query: 384 LKCELDIRAYNCLIDGL 400
D+ YN +I+GL
Sbjct: 992 SGLNPDVVCYNLIINGL 1008
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 178/398 (44%), Gaps = 13/398 (3%)
Query: 10 MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINCFCKMGRV 68
+R S P S + + L D+ S FK + ++ L T N ++ G++
Sbjct: 77 IRKSSKPDLSSSEVARVLMSFPDTDSSFSYFKSVAGNSNLVHTTETCNYMLEALRVDGKI 136
Query: 69 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTL 128
V + + + T+ ++ K L + + +A K+R FG N ++YN L
Sbjct: 137 EEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGL 196
Query: 129 INGLYRTGHTIVALNLFEEM------------ASGNGEFGVEGFVDKAKELFLQMKDENI 176
I+ L ++ A+ ++ M +S G ++ L +M+ +
Sbjct: 197 IHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGL 256
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
P+V T+T IR A NEA +L M D+G P+VVT+ V++D LC K+D A
Sbjct: 257 KPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKE 316
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+ M +P+ Y TL+D F ++ + + ME G V +++IL++ C
Sbjct: 317 VFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALC 376
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K A + M +GI P++ YNTL L +H+++ A ++FD M+ GV +
Sbjct: 377 KAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAY 436
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
TY FID K+ V A+E F ++ +I A N
Sbjct: 437 TYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACN 474
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 110/279 (39%), Gaps = 35/279 (12%)
Query: 157 VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
V+G +++ +F M+ I D TY ++ + +A L +M + G N
Sbjct: 132 VDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAY 191
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
++N ++ L K+ EA + MI G RP+ Y++LM G + L M
Sbjct: 192 SYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEM 251
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
E++G V++++I I + +I A + M +G PDVV Y L L ++
Sbjct: 252 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL 311
Query: 337 ERAFKLF-----------------------------------DEMQRDGVAADTWTYRTF 361
+ A ++F EM++DG D T+
Sbjct: 312 DCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTIL 371
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+D LCK EA +R ++ YN LI GL
Sbjct: 372 VDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGL 410
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 88/184 (47%)
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
T N +++ L +GK++E + + DLM + ++ + Y T+ + G + +A M
Sbjct: 122 TCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKM 181
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
G +SY+ LI+ K++ A+ +Y M+ G +P + Y++L V L + +
Sbjct: 182 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDI 241
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
E L EM+ G+ + +T+ I L + I EA E+ + + C D+ Y L
Sbjct: 242 ESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 301
Query: 397 IDGL 400
ID L
Sbjct: 302 IDAL 305
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLN-STGLFPDLYTYNILINCFCKMGRVSHGFV 73
P V +N++ L K + L LF + S G+ PDLYTYN LI G V
Sbjct: 996 PDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGK 1055
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ I R+ PN TF +LI+G + A A++ + G PN TY L N
Sbjct: 1056 IYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1112
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 178/351 (50%), Gaps = 32/351 (9%)
Query: 14 PPPVCSFNILFGCLAKNKH-YDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
P V S NIL L KNK D+ L +F+ + + G PD YTY LIN C++G +S
Sbjct: 152 PSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAK 211
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+ + + F+ + VT+TSLI GLC + + EA L +++ EPNVFTY++L++GL
Sbjct: 212 ELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGL 271
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ GH+ A+ L E M DK L P++VTY+++I G C
Sbjct: 272 CKGGHSSQAMQLLEVM-------------DKKHHL----------PNMVTYSTLINGLCK 308
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN--- 249
EA +L M QG++PN + I+ LC G EA+ +D M+ G+ PN
Sbjct: 309 ERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRAS 368
Query: 250 ----AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
++N ++ G C RA +L++SM + + + ++ L+ +CK ++ A
Sbjct: 369 WSLHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAA 428
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF-KLFDEMQRDGVAADT 355
+ EM+ G PD ++N + L++ +V A +L E+Q+ V A++
Sbjct: 429 RILEEMVLDGCIPDEGVWNVVIGGLWDRKKVREATEQLLVELQQKFVEAES 479
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 177/374 (47%), Gaps = 33/374 (8%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAV-TFTSLI 94
+ +F ++ L P Y +++ + V + R +R P++V + LI
Sbjct: 104 AIRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRA-IGFYREMRELGIPSSVVSLNILI 162
Query: 95 KGLCAESRIMEAA-ALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG 153
K LC +++A +F ++ GC+P+ +TY TLINGL R G+
Sbjct: 163 KALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGN---------------- 206
Query: 154 EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
+ +AKELF +M+ + + VVTYTS+I G C +N+ +EA LL EM ++P
Sbjct: 207 -------ISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEP 259
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
NV T++ +MD LCK G +A +LL++M + PN Y+TL++G C ++ A E+
Sbjct: 260 NVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREAVEIL 319
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD-------VVIYNTL 326
M G Y +I+G C + A + EM+ GI P+ V ++N +
Sbjct: 320 DRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRMHNMV 379
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
L RAF+L+ M+ ++ + T+ + CK + +A + + + C
Sbjct: 380 VQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARILEEMVLDGC 439
Query: 387 ELDIRAYNCLIDGL 400
D +N +I GL
Sbjct: 440 IPDEGVWNVVIGGL 453
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 173/375 (46%), Gaps = 28/375 (7%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G D T+ ++I+ + + +L R+ + F S+ +G R ++A
Sbjct: 45 GFRHDHETFGLIISRLVTVNQFRPAEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDA 104
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV--------- 157
+F K+ F P Y T+++ L H A+ + EM E G+
Sbjct: 105 IRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMR----ELGIPSSVVSLNI 160
Query: 158 --------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
+ VD A +F +M + PD TY ++I G C + +EAK L EM +
Sbjct: 161 LIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQK 220
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
G +VVT+ ++ LC++ +DEA LL+ M + + PN F Y++LMDG C G ++A
Sbjct: 221 GFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQA 280
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
+L M+ + +YS LING CK +++ A+ + M +G+KP+ +Y +
Sbjct: 281 MQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISG 340
Query: 330 LFEIHQVERAFKLFDEMQRDGVAAD--TWT-----YRTFIDGLCKNSYIVEAVELFRTLR 382
L + A DEM G++ + +W+ + + GLC N A +L+ ++R
Sbjct: 341 LCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLSMR 400
Query: 383 ILKCELDIRAYNCLI 397
++I ++CL+
Sbjct: 401 TRCISVEIDTFDCLV 415
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 166/371 (44%), Gaps = 33/371 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR-VSHGFV 73
P ++ + L + H + ++ + G+ + + NILI CK V
Sbjct: 118 PTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALR 177
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ + P++ T+ +LI GLC I EA LF ++ G +V TY +LI+GL
Sbjct: 178 IFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLC 237
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
++ + A+ L EE MK +I P+V TY+S++ G C
Sbjct: 238 QSNNLDEAIGLLEE-----------------------MKRNDIEPNVFTYSSLMDGLCKG 274
Query: 194 NDWNEAKCLLIEMMDQGVQ-PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
++A LL E+MD+ PN+VT++ +++ LCK K+ EA +LD M G++PNA +
Sbjct: 275 GHSSQAMQLL-EVMDKKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGL 333
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI-------LINGYCKNKEIEGAL 305
Y ++ G C G A M G + S+S+ ++ G C N + A
Sbjct: 334 YGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRMHNMVVQGLCNNVDPPRAF 393
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
LY M ++ I ++ ++ L + + +A ++ +EM DG D + I GL
Sbjct: 394 QLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARILEEMVLDGCIPDEGVWNVVIGGL 453
Query: 366 CKNSYIVEAVE 376
+ EA E
Sbjct: 454 WDRKKVREATE 464
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 150/319 (47%), Gaps = 24/319 (7%)
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
F + TF +I L ++ A + +++ C + ++ G R + A+
Sbjct: 46 FRHDHETFGLIISRLVTVNQFRPAEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAI 105
Query: 143 NLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
+F +M EGF + P Y +++ N A
Sbjct: 106 RVFHKM---------EGF--------------QLRPTQKAYLTILDILVEENHVKRAIGF 142
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGK-MDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
EM + G+ +VV+ N+++ LCKN + +D A R+ M G +P+++ Y TL++G C
Sbjct: 143 YREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLC 202
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
G ++ AKELF ME G + +V +Y+ LI+G C++ ++ A+ L EM I+P+V
Sbjct: 203 RLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVF 262
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
Y++L L + +A +L + M + + TY T I+GLCK + EAVE+ +
Sbjct: 263 TYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREAVEILDRM 322
Query: 382 RILKCELDIRAYNCLIDGL 400
RI + + Y +I GL
Sbjct: 323 RIQGLKPNAGLYGKIISGL 341
>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 182/378 (48%), Gaps = 15/378 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + N L K + L +R+ TG+ PD+ TYN LI +C + R+ +
Sbjct: 264 PNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALEL 323
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPNVFTYNTLINGLY 133
+ + P+ V++ +++ LC E +I + L K+ + P+ TYNTLI+ L
Sbjct: 324 IAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLS 383
Query: 134 RTGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDV 180
+ GH AL +E A G F +G +D+AK L + M + NPDV
Sbjct: 384 KHGHADDALAFLKE-AEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDV 442
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTYT+++ GFC +EAK +L +M G +PN V++ +++ LC +GK EA ++++
Sbjct: 443 VTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINV 502
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+ PNA Y +M GF G+++ A +L M G T ++LI C+N++
Sbjct: 503 SEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQK 562
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ A E L+KG +VV + T+ +I +E A + ++M D TY
Sbjct: 563 VVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTA 622
Query: 361 FIDGLCKNSYIVEAVELF 378
D L K + EA EL
Sbjct: 623 LFDALGKKGRLDEAAELI 640
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 188/396 (47%), Gaps = 22/396 (5%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
C+ + M+ P ++N L L+K+ H D L+ K G D Y+ +++
Sbjct: 357 CLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHS 416
Query: 62 FCKMGRVSHG-FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
FC+ GR+ +V+ RSC P+ VT+T+++ G C RI EA + ++ GC+P
Sbjct: 417 FCQKGRMDEAKSLVIDMYSRSC-NPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKP 475
Query: 121 NVFTYNTLINGLYRTGHTIVA---LNLFEE--MASGNGEFGV-------EGFVDKAKELF 168
N +Y L+NGL +G ++ A +N+ EE +GV EG + +A +L
Sbjct: 476 NTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLT 535
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+M ++ P V +I+ C EAK L E +++G NVV F ++ C+
Sbjct: 536 REMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQI 595
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
G M+ A +L+ M P+A Y L D GR++ A EL V M S G T ++
Sbjct: 596 GDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTF 655
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+I+ YC+ ++ L+L M+ + KP IYN + L + +E A KL ++ R
Sbjct: 656 RSVIHRYCQWGRVDDMLNLLDRMVKR--KPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLR 713
Query: 349 DGVAADTWTYRTFID-----GLCKNSYIVEAVELFR 379
D T ++ G+ ++Y V A ++FR
Sbjct: 714 TASKLDANTCHVLMESCLKKGVALSAYKV-ACQMFR 748
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 177/388 (45%), Gaps = 26/388 (6%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINCFCKMGRVSHGF 72
PP S+ + G L K K + V L +++ + L PD TYN LI+ K G
Sbjct: 333 PPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDAL 392
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
L F + V +++++ C + R+ EA +L + C P+V TY +++G
Sbjct: 393 AFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGF 452
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
R G +D+AK++ QM P+ V+YT+++ G C+
Sbjct: 453 CRLGR-----------------------IDEAKKMLQQMYKHGCKPNTVSYTALLNGLCH 489
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
+ EA+ ++ + PN +T+ V+M + GK+ EA L M++ G P
Sbjct: 490 SGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVE 549
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
N L+ C +V AK+ + GC V +++ +I+G+C+ ++E ALS+ +M
Sbjct: 550 INLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMY 609
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
PD V Y LF L + +++ A +L +M G+ T+R+ I C+ +
Sbjct: 610 LSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVD 669
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + L R++K + YN +I+ L
Sbjct: 670 DMLNLLD--RMVKRKPFRTIYNHVIEKL 695
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 187/438 (42%), Gaps = 49/438 (11%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R S P+ + +L L+K K + + + G+ + ++ + + G++ +
Sbjct: 191 RYSHHPLVYYTLL-DVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRN 249
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
VL + ++ PN + I L ++ +A +++V G +P++ TYN+LI
Sbjct: 250 ALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIK 309
Query: 131 GLYRTGHTIVALNLFEEMASGN------GEFGVEGFVDKAKE------LFLQM-KDENIN 177
G AL L + S + V GF+ K K+ L +M +D N+
Sbjct: 310 GYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLI 369
Query: 178 PDVVT-----------------------------------YTSVIRGFCYANDWNEAKCL 202
PD VT Y++++ FC +EAK L
Sbjct: 370 PDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSL 429
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
+I+M + P+VVT+ I+D C+ G++DEA ++L M + G +PN Y L++G C
Sbjct: 430 VIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCH 489
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
+G+ A+E+ E T +Y ++++G+ + ++ A L EM+ KG P V
Sbjct: 490 SGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVE 549
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
N L L + +V A K +E G A + + T I G C+ + A+ + +
Sbjct: 550 INLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMY 609
Query: 383 ILKCELDIRAYNCLIDGL 400
+ D Y L D L
Sbjct: 610 LSNKHPDAVTYTALFDAL 627
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 112/276 (40%), Gaps = 45/276 (16%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
P+ TY ++++ F + G++S + ++ F P V LI+ LC +++EA
Sbjct: 510 PNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKY 569
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE------------FGV 157
+ GC NV + T+I+G + G AL++ E+M N G
Sbjct: 570 LEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGK 629
Query: 158 EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN----------------------- 194
+G +D+A EL ++M + ++P VT+ SVI +C
Sbjct: 630 KGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKRKPFRTIYN 689
Query: 195 ----------DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+ EA+ LL +++ + + T +V+M+ K G A ++ M +
Sbjct: 690 HVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYKVACQMFRR 749
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+ P+ + + L G + A +L + G
Sbjct: 750 NLTPDLKLCEKVTKKLVLDGNLVEADKLMLRFVERG 785
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 93/244 (38%), Gaps = 46/244 (18%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P PV N+L L +N+ + + G ++ + +I+ FC++G +
Sbjct: 545 PTPV-EINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALS 603
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
VL + S P+AVT+T+L L + R+ EAA L K+ G +P T+ ++I+
Sbjct: 604 VLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYC 663
Query: 134 RTGHTIVALNLFEEMAS------------------GNGEFG------------------- 156
+ G LNL + M GN E
Sbjct: 664 QWGRVDDMLNLLDRMVKRKPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTC 723
Query: 157 --------VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD 208
+G A ++ QM N+ PD+ V + + EA L++ ++
Sbjct: 724 HVLMESCLKKGVALSAYKVACQMFRRNLTPDLKLCEKVTKKLVLDGNLVEADKLMLRFVE 783
Query: 209 QGVQ 212
+G+Q
Sbjct: 784 RGIQ 787
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 199/409 (48%), Gaps = 20/409 (4%)
Query: 7 MLNMRP---SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
+L+MR P S++++ L ++F + S G+ P ++T+ I++ C
Sbjct: 170 LLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALC 229
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
V +L + + PN++ + +LI L ++++ EA L ++ V GC P+V
Sbjct: 230 MFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQ 289
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMA-----SGNGEFGVE-------GFVDKAKELFLQM 171
T+N +I+GL + A L + M N +G G +++A+++ +++
Sbjct: 290 TFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKI 349
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE-MMDQGVQPNVVTFNVIMDELCKNGK 230
P+ ++I G+ + EA+ L E M++ G QP++ T+N++M LCK G
Sbjct: 350 P----CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGS 405
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ A L++ M + G PN Y L++G C G + A + M + G T Y+
Sbjct: 406 LSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNC 465
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI C+ +++ AL+L EM +KG KPD+ YN+L L ++ +++ AF+LF M DG
Sbjct: 466 LICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDG 525
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
A+ TY T I L + +A+ L + C LD YN LI
Sbjct: 526 AVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKA 574
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 188/388 (48%), Gaps = 30/388 (7%)
Query: 15 PPVCSFN-ILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P V +FN ++ G NK +D L R+ G +PD TY L++ C++G+++
Sbjct: 286 PDVQTFNDVIHGLCKVNKIHDAT-KLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARK 344
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV-FGCEPNVFTYNTLINGL 132
+L +I C PN +LI G ++ EA + + + FG +P++FTYN L++GL
Sbjct: 345 ILIKI--PC--PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGL 400
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ G A +L EM+ E P+V+TY ++ G C
Sbjct: 401 CKEGSLSFARDLVNEMSRRGCE-----------------------PNVITYAILVNGLCK 437
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
A EA +L EM +G+ N V +N ++ LC+ K+ A LL M G +P+ F
Sbjct: 438 AGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFT 497
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
YN+L+ G C R++ A LF +M G +Y+ LI+ + + AL+L +ML
Sbjct: 498 YNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDML 557
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
+G D + YN L ++ +E+ +L+++M DG+ ADT + I+GLCK +
Sbjct: 558 FRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVD 617
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
A E R DI YN +++GL
Sbjct: 618 NAFEFLRDAINRGFVPDIVTYNSVLNGL 645
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 156/344 (45%), Gaps = 12/344 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++NIL L K L ++ G P++ TY IL+N CK G + +V
Sbjct: 388 PDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLV 447
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + T N+V + LI LC + ++ A L +++ GC+P++FTYN+LI GL +
Sbjct: 448 LHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCK 507
Query: 135 TGHTIVALNLFEEM-----ASGNGEFGV-------EGFVDKAKELFLQMKDENINPDVVT 182
A LF M + N + G KA L M D +T
Sbjct: 508 VDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKIT 567
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I+ FC + + L +M+ G+ + ++ N++++ LCK GK+D A L I
Sbjct: 568 YNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAI 627
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G P+ YN++++G C GR+ A LF ++ G F+Y+ I+ CK +
Sbjct: 628 NRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVN 687
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
A + + G P + +N L L + E F + DE+
Sbjct: 688 DACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 170/381 (44%), Gaps = 19/381 (4%)
Query: 35 TVLSLFKRLN-STGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
T+L +F+R+ G Y + IN +G+ +L ++ F +
Sbjct: 94 TLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMII 153
Query: 94 IKGLCAESRIMEAAALFTKLR-VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN 152
+K + +A L +R V+ CEP +Y+ ++ L VA N+F +M S
Sbjct: 154 MKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKG 213
Query: 153 GEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
V F VD A L M P+ + Y ++I N +EA
Sbjct: 214 VSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEAL 273
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
LL EM G P+V TFN ++ LCK K+ +A++L+D M+ G P+ Y L+ G
Sbjct: 274 KLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGL 333
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE-MLSKGIKPD 319
C G++N A+++ + + C + + LINGY + +++ A S E M++ G +PD
Sbjct: 334 CRIGKLNEARKILIKIP---CPNNAI-LNTLINGYVMSGQLKEAQSFLNETMINFGFQPD 389
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
+ YN L L + + A L +EM R G + TY ++GLCK + EA +
Sbjct: 390 IFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLH 449
Query: 380 TLRILKCELDIRAYNCLIDGL 400
+ ++ YNCLI L
Sbjct: 450 EMSARGLTINSVIYNCLICAL 470
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 146/316 (46%), Gaps = 12/316 (3%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
++ R P V ++ IL L K + + +++ GL + YN LI C+ +
Sbjct: 416 MSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEK 475
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V +L + P+ T+ SLI GLC RI EA LF + + G N TYNT
Sbjct: 476 VHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNT 535
Query: 128 LINGLYRTGHTIVALNLFEEM---------ASGNG---EFGVEGFVDKAKELFLQMKDEN 175
LI+ L R G AL L +M + NG F G ++K EL+ QM +
Sbjct: 536 LIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDG 595
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+ D ++ +I G C + A L + +++G P++VT+N +++ LCK G++ EA
Sbjct: 596 LGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEAL 655
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
L D + GVRP+AF YNT + C G VN A F G + ++++L+
Sbjct: 656 NLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTL 715
Query: 296 CKNKEIEGALSLYGEM 311
K E + E+
Sbjct: 716 LKQSNQENNFFVLDEL 731
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 188/395 (47%), Gaps = 16/395 (4%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +N L L + D + + G+ P++ TY + I +C+ V F +
Sbjct: 209 VVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYE 268
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++R P+ VT ++L+ GLC + R EA ALF ++ G PN TY LI+ L +
Sbjct: 269 EMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQ 328
Query: 137 HTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYT 184
+L+L E+ S + EG +D+AK++F +N P+ VTYT
Sbjct: 329 RGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYT 388
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+I C A + + A+ +L EM ++ + PNVVTF+ I++ L K G + +A+ + M +
Sbjct: 389 VLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKER 448
Query: 245 GVRPNAFVYNTLMDGF--CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G+ PN Y T++DG CL A +++ M G F L+NG KN +IE
Sbjct: 449 GIDPNVVTYGTVIDGSFKCLGQEA--ALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIE 506
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A +L+ EM +G+ D V Y TL LF+ + AFK+ E+ + D Y FI
Sbjct: 507 KAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFI 566
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
+ LC EA ++ + D YN +I
Sbjct: 567 NCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMI 601
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 183/404 (45%), Gaps = 14/404 (3%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFP--DLYTYNILINCFCKMGRV 68
R P + N + L ++ D +L + + G D+ +N L++ +CK+G +
Sbjct: 131 RGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDM 190
Query: 69 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTL 128
F V R+ + V + SL+ GLC + A + ++ G EPNV TY
Sbjct: 191 ETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMF 250
Query: 129 INGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENI 176
I R A +L+EEM G +G +A LF +M+
Sbjct: 251 IVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGA 310
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
P+ VTY +I A NE+ LL E++ +GV +++ + +MD LCK GK+DEA
Sbjct: 311 APNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKD 370
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+ + PN Y L+D C G V+ A+++ ME + V ++S +ING
Sbjct: 371 MFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLV 430
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
K + A EM +GI P+VV Y T+ F+ E A ++ EM +GV + +
Sbjct: 431 KRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKF 490
Query: 357 TYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ ++GL KN I +A LFR + LD Y LIDGL
Sbjct: 491 IVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGL 534
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 166/363 (45%), Gaps = 16/363 (4%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ L L K + + + L L PD YN+ INC C +G+ L +
Sbjct: 526 NYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEM 585
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ P+ VT+ ++I E + +A L ++ +PN+ TY+TLI GL+ G
Sbjct: 586 QSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAV 645
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKA----------KELFLQMKDENINP----DVVTYT 184
A L EM+S F + +L L++ + +N D+ Y
Sbjct: 646 EKAKYLLNEMSSSG--FSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYN 703
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+++R CY +A +L EM +G+ P+ +TFN ++ K+G +D A D M+
Sbjct: 704 TLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYH 763
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G+ PN +NTL+ G GR+ + + M+ G + +Y IL+ GY K A
Sbjct: 764 GISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEA 823
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
+ LY EM+ KG P V YN L ++ + +A +LF+EMQ GV + TY + G
Sbjct: 824 VRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSG 883
Query: 365 LCK 367
K
Sbjct: 884 WSK 886
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 190/400 (47%), Gaps = 24/400 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +++ M+ + P V + + L G L K+ + +LF+ + G P+ TY +LI+
Sbjct: 264 FSLYEEMVR-KGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLID 322
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
K R + +LG ++ + + +T+L+ LC E +I EA +F P
Sbjct: 323 TLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTP 382
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
N TY LI+ L + G+ VD A+++ +M++++I+P+V
Sbjct: 383 NGVTYTVLIDALCKAGN-----------------------VDGAEQVLSEMEEKSISPNV 419
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VT++S+I G +A + EM ++G+ PNVVT+ ++D K + A +
Sbjct: 420 VTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHE 479
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M+ GV N F+ ++L++G G++ +A+ LF M G +Y+ LI+G K
Sbjct: 480 MLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGN 539
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ A + E+ K + PD V+YN L + + + A +EMQ G+ D TY T
Sbjct: 540 LPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNT 599
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I + +A++L ++ + ++ Y+ LI GL
Sbjct: 600 MIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGL 639
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 187/428 (43%), Gaps = 47/428 (10%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+ L L K D +F+ S P+ TY +LI+ CK G V VL +
Sbjct: 352 YTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEME 411
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+PN VTF+S+I GL + +A +++ G +PNV TY T+I+G ++
Sbjct: 412 EKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQE 471
Query: 140 VALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKD-------------- 173
AL+++ EM E G ++KA+ LF +M +
Sbjct: 472 AALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLI 531
Query: 174 ---------------------ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
+N+ PD V Y I C EA+ L EM G++
Sbjct: 532 DGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLK 591
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
P+ VT+N ++ + GK +A +LL+ M + ++PN Y+TL+ G G V +AK L
Sbjct: 592 PDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYL 651
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
M S G + T ++ ++ + + + L ++ M++ G+ D+ +YNTL VL
Sbjct: 652 LNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCY 711
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
+A + +EM G+A DT T+ I G K+ ++ A + + ++
Sbjct: 712 NGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVAT 771
Query: 393 YNCLIDGL 400
+N L+ GL
Sbjct: 772 FNTLLGGL 779
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 167/382 (43%), Gaps = 37/382 (9%)
Query: 23 LFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSC 82
L L KN + +LF+ +N G+ D Y LI+ K G + F V +
Sbjct: 495 LVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKN 554
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
P+AV + I LC + EA + +++ G +P+ TYNT+I R G T AL
Sbjct: 555 LLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKAL 614
Query: 143 NLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
L NG MK +I P+++TY+++I G A +AK L
Sbjct: 615 KLL------NG-----------------MKRSSIKPNLITYSTLIVGLFEAGAVEKAKYL 651
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
L EM G P +T ++ + + D + + M+ G+ + VYNTL+ C
Sbjct: 652 LNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCY 711
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G +A + M G +++ LI G+ K+ ++ A S Y +ML GI P+V
Sbjct: 712 NGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVAT 771
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
+NTL L ++ + + +EM++ G+ TY + G K S VEAV L+
Sbjct: 772 FNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLY---- 827
Query: 383 ILKCEL-------DIRAYNCLI 397
CE+ + YN LI
Sbjct: 828 ---CEMVGKGFLPKVSTYNALI 846
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 178/363 (49%), Gaps = 15/363 (4%)
Query: 51 DLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 110
D +YN++++ F + G ++ +L + + +AVT +++ GLC + R+ AAAL
Sbjct: 102 DTVSYNVVMSGFSEQGGLAP-EALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160
Query: 111 TKLRVFG--CEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF-------- 160
+ G +V +N+L++G + G A + E M + V G+
Sbjct: 161 EVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLC 220
Query: 161 ----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
VD A+++ MK + + P+VVTYT I +C N ++A L EM+ +GV P+VV
Sbjct: 221 RAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVV 280
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
T + ++ LCK+G+ EA L M +IG PN Y L+D R N + L +
Sbjct: 281 TLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEV 340
Query: 277 ESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
S G + Y+ L++ CK +I+ A ++ LS P+ V Y L L + V
Sbjct: 341 VSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNV 400
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
+ A ++ EM+ ++ + T+ + I+GL K ++ +A + R ++ + ++ Y +
Sbjct: 401 DGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTV 460
Query: 397 IDG 399
IDG
Sbjct: 461 IDG 463
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 159/379 (41%), Gaps = 12/379 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +N+ CL S + + STGL PD TYN +I + G+ + +
Sbjct: 557 PDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKL 616
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + RS PN +T+++LI GL + +A L ++ G P T+ ++ +
Sbjct: 617 LNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQ 676
Query: 135 TGHTIVALNLFEEMASGN--GEFGV----------EGFVDKAKELFLQMKDENINPDVVT 182
+ + L + E M + + V G KA + +M I PD +T
Sbjct: 677 GRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTIT 736
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+ ++I G + + A +M+ G+ PNV TFN ++ L G++ E+ +L+ M
Sbjct: 737 FNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMK 796
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ P+ Y+ L+ G+ A L+ M G V +Y+ LI+ + K +
Sbjct: 797 KRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMS 856
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ EM ++G+ P Y+ L ++ K +M+ G + T +
Sbjct: 857 QAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSIS 916
Query: 363 DGLCKNSYIVEAVELFRTL 381
K EA L + L
Sbjct: 917 RAFSKPGMSWEARRLLKNL 935
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 119/225 (52%), Gaps = 5/225 (2%)
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D V+Y V+ GF + LL EM +GV + VT N ++ LC++G++D A+ L
Sbjct: 102 DTVSYNVVMSGFSEQGGL-APEALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160
Query: 239 DLMIQIGVRPNAFV--YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
++M++ G V +N+L+DG+C G + A + M++ G V Y+ L+ G C
Sbjct: 161 EVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLC 220
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF-EIHQVERAFKLFDEMQRDGVAADT 355
+ E++ A + M G++P+VV Y T+F+V + + V+ AF L++EM R GV D
Sbjct: 221 RAGEVDAARDMVDTMKRDGVEPNVVTY-TMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDV 279
Query: 356 WTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
T + GLCK+ EA LFR + + + Y LID L
Sbjct: 280 VTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTL 324
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 113/238 (47%), Gaps = 14/238 (5%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+N L L N + + + ++ G+ PD T+N LI K G + + F ++L
Sbjct: 702 YNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQML 761
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+PN TF +L+ GL + RI E+ + +++ G EP+ TY+ L+ G + + +
Sbjct: 762 YHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKV 821
Query: 140 VALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
A+ L+ EM G G +F G + +AKELF +M++ + P TY +
Sbjct: 822 EAVRLYCEMV-GKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDIL 880
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+ G+ + E + L +M ++G P+ T + I K G EA RLL + ++
Sbjct: 881 VSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNLYKV 938
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/141 (19%), Positives = 55/141 (39%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P +++IL K + + L+ + G P + TYN LI+ F K+G
Sbjct: 795 MKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGM 854
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+S + + P + T+ L+ G E ++ G P+ T ++
Sbjct: 855 MSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSS 914
Query: 128 LINGLYRTGHTIVALNLFEEM 148
+ + G + A L + +
Sbjct: 915 ISRAFSKPGMSWEARRLLKNL 935
>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
Length = 676
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 184/387 (47%), Gaps = 16/387 (4%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
L + H+ F + G+ PD ++ L+ C+ GR +L + R F+ +
Sbjct: 159 LRQRHHFAHARQAF---DGMGVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLD 215
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
+ T T +++ C + R + LF ++ G PNV Y ++GL + G+ A ++ E
Sbjct: 216 SATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLE 275
Query: 147 EMASGNGEFGVE------------GFVDKAKELFLQM-KDENINPDVVTYTSVIRGFCYA 193
EM + V G+ ++A LFL++ K + P+V TYT +I G+C
Sbjct: 276 EMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKE 335
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
A+ LL M++QG+ PN T+ ++D C+ G D A L++ M G PN + Y
Sbjct: 336 GKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTY 395
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N ++ GFC G++ +A ++ S G +Y++LI +CK I AL L+ +M
Sbjct: 396 NAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAE 455
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
PD+ Y T+ + + Q+E++ +LFD+ G+ TY + I G C+
Sbjct: 456 NSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTS 515
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A+++F + C D Y LI GL
Sbjct: 516 ALKVFERMVQHGCLPDPITYGALISGL 542
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 187/381 (49%), Gaps = 15/381 (3%)
Query: 15 PPVCSFNIL-FGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P SF L GC + + ++ +L + G D T +++ FC+ GR
Sbjct: 179 PDARSFRALVLGCCQEGR-FEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPG 237
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ GR++ PN V +T+ + GLC + +A + ++ G +PNV+T+ +LI+GL
Sbjct: 238 LFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLC 297
Query: 134 RTGHTIVALNLFEEMASGN-------------GEFGVEGFVDKAKELFLQMKDENINPDV 180
+ G T A LF ++ + G + EG + +A+ L +M ++ + P+
Sbjct: 298 KIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNT 357
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
TYT++I G C ++ A L+ +M +G PN+ T+N I+ CK GK+ +A ++L +
Sbjct: 358 NTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRM 417
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
G+ P+ Y L+ C G + A +LF M C + +Y+ +I YC+ ++
Sbjct: 418 ATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQ 477
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+E + L+ + LS G+ P Y ++ + + A K+F+ M + G D TY
Sbjct: 478 MEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGA 537
Query: 361 FIDGLCKNSYIVEAVELFRTL 381
I GLCK S + EA LF T+
Sbjct: 538 LISGLCKESRLEEARALFETM 558
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 174/392 (44%), Gaps = 33/392 (8%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ M +PP V ++ L K + + + + GL P++YT+ LI+
Sbjct: 238 LFGRMVEM-GNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGL 296
Query: 63 CKMGRVSHGFVVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK+G F + ++++S + PN T+T +I G C E ++ A L ++ G PN
Sbjct: 297 CKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPN 356
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFL 169
TY TLI+G R G A L +M G F +G + +A ++
Sbjct: 357 TNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLR 416
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+ + PD VTYT +I C A L +M + P++ T+ I+ C+
Sbjct: 417 MATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQR 476
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+M+++ +L D + IG+ P Y +++ G+C G+ A ++F M GC +Y
Sbjct: 477 QMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYG 536
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
LI+G CK +E A +L+ ML K + P V TL ++ +RD
Sbjct: 537 ALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTL---------------AYEYCRRD 581
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
T +F+DGL K A L R L
Sbjct: 582 ----KTTIAVSFLDGLDKRQQAHAADALVRKL 609
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 156/377 (41%), Gaps = 26/377 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F ++ P V ++ ++ G K L R+ GL P+ TY LI+
Sbjct: 306 FRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLID 365
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C+ G F ++ ++ F PN T+ ++I G C + +I +A + G P
Sbjct: 366 GHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCP 425
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
+ TY LI + GH AL+LF +MA + + +PD+
Sbjct: 426 DKVTYTMLITEHCKQGHITYALDLFNQMA-----------------------ENSCHPDI 462
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
TYT++I +C +++ L + + G+ P T+ ++ C+ GK A ++ +
Sbjct: 463 DTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFER 522
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M+Q G P+ Y L+ G C R+ A+ LF +M + L YC+ +
Sbjct: 523 MVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDK 582
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
A+S + L K + + L L + ++ A + A D TY +
Sbjct: 583 TTIAVSFL-DGLDK--RQQAHAADALVRKLSAVDNLDAASLFLKNVLDKHYAVDHATYTS 639
Query: 361 FIDGLCKNSYIVEAVEL 377
FI+ +++ A E+
Sbjct: 640 FINSCYESNRYALASEI 656
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 9/210 (4%)
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMD-ELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
N EA +L+E+ G+ V T N ++ L + A + D M GVRP+A
Sbjct: 127 NRLREATDMLLELRSHGLPLVVETANWVLRVGLRQRHHFAHARQAFDGM---GVRPDARS 183
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
+ L+ G C GR A L +M G + + ++++ +C+ L+G M+
Sbjct: 184 FRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMV 243
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
G P+VV Y L + V++AF + +EM G+ + +T+ + IDGLCK +
Sbjct: 244 EMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTE 303
Query: 373 EAVELFRTLRILKC---ELDIRAYNCLIDG 399
A LF L+++K + ++ Y +I G
Sbjct: 304 RAFRLF--LKLVKSSSYKPNVHTYTVMIGG 331
>gi|449433055|ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 602
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 169/369 (45%), Gaps = 25/369 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPD--LYTYNILINCFCKMGRVSHGF 72
P V ++N F K D + L++ + TG+ D + T LI FC +VS +
Sbjct: 188 PYVETWNFAFQSCLKFGRTDLIWKLYEGMMETGVQKDVDIETVGYLIQAFCNDNKVSRAY 247
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
+L + L TP F LI G C E L + V P++FTY +ING
Sbjct: 248 EILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGF 307
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ T+ A E+F +KD PD+V YT++I GFC
Sbjct: 308 CKNWMTLQAF-----------------------EVFNALKDRGYAPDMVMYTTLIHGFCK 344
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
+A L EM+D+G PN ++N ++ CK G +DEA +L M+ G +
Sbjct: 345 MGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLS 404
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
NTL+ G CL GR + A + F M V +Y+ LI G+C+ ++ + L E+
Sbjct: 405 CNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQ 464
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
+KG++P Y L L ++ V+ A +++++M G+ T I GLC+ Y+V
Sbjct: 465 AKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCEQGYVV 524
Query: 373 EAVELFRTL 381
E +E T+
Sbjct: 525 EGMEWLITM 533
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 151/336 (44%), Gaps = 22/336 (6%)
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
F+P + + I+ +C + EA F L+ G P V T+N + G T +
Sbjct: 151 FSPEPASLENYIRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIW 210
Query: 143 NLFEEMASGNGEFGVEGFVD------------------KAKELFLQMKDENINPDVVTYT 184
L+E M E GV+ VD +A E+ Q ++ + P +
Sbjct: 211 KLYEGMM----ETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFN 266
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
+I GFC + + L+ M+ + P++ T+ I++ CKN +A + + +
Sbjct: 267 KLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDR 326
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
G P+ +Y TL+ GFC G++ A +L+ M G +SY+ LI G+CK ++ A
Sbjct: 327 GYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEA 386
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
+ LY +ML G K + NTL + L + + A+ F EM + D TY T I G
Sbjct: 387 MKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQG 446
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
C+ ++++ +L + L+ + +Y LI L
Sbjct: 447 FCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKL 482
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 143/315 (45%), Gaps = 23/315 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
+FN L K K++ VL L + PD++TY +IN FCK F V +
Sbjct: 264 AFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNAL 323
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ P+ V +T+LI G C ++ +A+ L+ ++ G PN ++YNTLI G + G+
Sbjct: 324 KDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGN- 382
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
+D+A +L+ +M D ++ ++I G C +E
Sbjct: 383 ----------------------LDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDE 420
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A EM + + +V+T+N ++ C+ GK+ +++ LL + G++P+ Y L+
Sbjct: 421 AYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQ 480
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
C G V AKE++ M + G V + +I+G C+ + + ML +KP
Sbjct: 481 KLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKP 540
Query: 319 DVVIYNTLFVVLFEI 333
+ L L +I
Sbjct: 541 QKETFYKLIQSLIQI 555
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 109/258 (42%), Gaps = 23/258 (8%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
L R P + + L K + L+ + G P+ Y+YN LI FCK+G
Sbjct: 323 LKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGN 382
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ + ++L S + ++ +LI GLC R EA F ++ +V TYNT
Sbjct: 383 LDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNT 442
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
LI G R G + + +L +E+ + + + P +Y +I
Sbjct: 443 LIQGFCREGKVLQSTDLLKELQA-----------------------KGLQPSTSSYAHLI 479
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVR 247
+ C EAK + +M ++G+QP V T + I+ LC+ G + E L M++ ++
Sbjct: 480 QKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLK 539
Query: 248 PNAFVYNTLMDGFCLTGR 265
P + L+ G+
Sbjct: 540 PQKETFYKLIQSLIQIGK 557
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 199/409 (48%), Gaps = 20/409 (4%)
Query: 7 MLNMRP---SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
+L+MR P S++++ L ++F + S G+ P ++T+ I++ C
Sbjct: 170 LLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALC 229
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
V +L + + PN++ + +LI L ++++ EA L ++ V GC P+V
Sbjct: 230 MFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQ 289
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMA-----SGNGEFGVE-------GFVDKAKELFLQM 171
T+N +I+GL + A L + M N +G G +++A+++ +++
Sbjct: 290 TFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKI 349
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE-MMDQGVQPNVVTFNVIMDELCKNGK 230
P+ ++I G+ + EA+ L E M++ G QP++ T+N++M LCK G
Sbjct: 350 P----CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGS 405
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ A L++ M + G PN Y L++G C G + A + M + G T Y+
Sbjct: 406 LSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNC 465
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI C+ +++ AL+L EM +KG KPD+ YN+L L ++ +++ AF+LF M DG
Sbjct: 466 LICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDG 525
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
A+ TY T I L + +A+ L + C LD YN LI
Sbjct: 526 AVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKA 574
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 188/388 (48%), Gaps = 30/388 (7%)
Query: 15 PPVCSFN-ILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P V +FN ++ G NK +D L R+ G +PD TY L++ C++G+++
Sbjct: 286 PDVQTFNDVIHGLCKVNKIHDAT-KLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARK 344
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV-FGCEPNVFTYNTLINGL 132
+L +I C PN +LI G ++ EA + + + FG +P++FTYN L++GL
Sbjct: 345 ILIKI--PC--PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGL 400
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ G A +L EM+ E P+V+TY ++ G C
Sbjct: 401 CKEGSLSFARDLVNEMSRRGCE-----------------------PNVITYAILVNGLCK 437
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
A EA +L EM +G+ N V +N ++ LC+ K+ A LL M G +P+ F
Sbjct: 438 AGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFT 497
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
YN+L+ G C R++ A LF +M G +Y+ LI+ + + AL+L +ML
Sbjct: 498 YNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDML 557
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
+G D + YN L ++ +E+ +L+++M DG+ ADT + I+GLCK +
Sbjct: 558 FRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVD 617
Query: 373 EAVELFRTLRILKCELDIRAYNCLIDGL 400
A E R DI YN +++GL
Sbjct: 618 NAFEFLRDAINRGFVPDIVTYNSVLNGL 645
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 157/344 (45%), Gaps = 12/344 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++NIL L K L ++ G P++ TY IL+N CK G + +V
Sbjct: 388 PDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLV 447
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + T N+V + LI LC + ++ A L +++ GC+P++FTYN+LI GL +
Sbjct: 448 LHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCK 507
Query: 135 TGHTIVALNLFEEM-----ASGNGEFGV-------EGFVDKAKELFLQMKDENINPDVVT 182
A LF M + N + G KA L M D +T
Sbjct: 508 VDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKIT 567
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I+ FC + + L +M+ G+ + ++ N++++ LCK GK+D A L I
Sbjct: 568 YNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAI 627
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G P+ YN++++G C GR+ A LF ++ G F+Y+ I+ CK +
Sbjct: 628 NRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVN 687
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
A S + + G P + +N L L + E F + DE+
Sbjct: 688 DACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 170/381 (44%), Gaps = 19/381 (4%)
Query: 35 TVLSLFKRLN-STGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
T+L +F+R+ G Y + IN +G+ +L ++ F +
Sbjct: 94 TLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMII 153
Query: 94 IKGLCAESRIMEAAALFTKLR-VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN 152
+K + +A L +R V+ CEP +Y+ ++ L VA N+F +M S
Sbjct: 154 MKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKG 213
Query: 153 GEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
V F VD A L M P+ + Y ++I N +EA
Sbjct: 214 VSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEAL 273
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
LL EM G P+V TFN ++ LCK K+ +A++L+D M+ G P+ Y L+ G
Sbjct: 274 KLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGL 333
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE-MLSKGIKPD 319
C G++N A+++ + + C + + LINGY + +++ A S E M++ G +PD
Sbjct: 334 CRIGKLNEARKILIKIP---CPNNAI-LNTLINGYVMSGQLKEAQSFLNETMINFGFQPD 389
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
+ YN L L + + A L +EM R G + TY ++GLCK + EA +
Sbjct: 390 IFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLH 449
Query: 380 TLRILKCELDIRAYNCLIDGL 400
+ ++ YNCLI L
Sbjct: 450 EMSARGLTINSVIYNCLICAL 470
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 146/316 (46%), Gaps = 12/316 (3%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
++ R P V ++ IL L K + + +++ GL + YN LI C+ +
Sbjct: 416 MSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEK 475
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
V +L + P+ T+ SLI GLC RI EA LF + + G N TYNT
Sbjct: 476 VHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNT 535
Query: 128 LINGLYRTGHTIVALNLFEEM---------ASGNG---EFGVEGFVDKAKELFLQMKDEN 175
LI+ L R G AL L +M + NG F G ++K EL+ QM +
Sbjct: 536 LIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDG 595
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+ D ++ +I G C + A L + +++G P++VT+N +++ LCK G++ EA
Sbjct: 596 LGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEAL 655
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
L D + GVRP+AF YNT + C G VN A F G + ++++L+
Sbjct: 656 NLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTL 715
Query: 296 CKNKEIEGALSLYGEM 311
K E + E+
Sbjct: 716 LKQSNQENNFFVLDEL 731
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.327 0.142 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,907,713,099
Number of Sequences: 23463169
Number of extensions: 233204401
Number of successful extensions: 884361
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8000
Number of HSP's successfully gapped in prelim test: 4523
Number of HSP's that attempted gapping in prelim test: 637011
Number of HSP's gapped (non-prelim): 82173
length of query: 400
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 255
effective length of database: 8,957,035,862
effective search space: 2284044144810
effective search space used: 2284044144810
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 78 (34.7 bits)