BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040367
(400 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 284 bits (726), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 158/445 (35%), Positives = 244/445 (54%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P + FN L +AK +D V+SL +R+ + + DLY+YNILINCF
Sbjct: 67 LFGEMVQSRP-LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCF 125
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF------ 116
C+ ++ VLG++++ + P+ VT +SL+ G C RI EA AL ++ V
Sbjct: 126 CRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNT 185
Query: 117 -----------------------------GCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
GC+P++FTY T++NGL + G +AL+L ++
Sbjct: 186 VTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK 245
Query: 148 MASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M G E V + V+ A LF +M ++ I P+VVTY S+IR C
Sbjct: 246 MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 305
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++A LL +M+++ + PNVVTF+ ++D K GK+ EA +L D MI+ + P+ F Y++
Sbjct: 306 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 365
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L++GFC+ R++ AK +F M S C V +Y+ LI G+CK K +E + L+ EM +G
Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 425
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ + V YNTL LF+ + A K+F +M DGV D TY +DGLCK + +A+
Sbjct: 426 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 485
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
+F L+ K E DI YN +I+G+
Sbjct: 486 VVFEYLQKSKMEPDIYTYNIMIEGM 510
Score = 197 bits (502), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 186/366 (50%), Gaps = 23/366 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V + + L K+ + L+LF +++ G+ P++ TYN LI C C GR S +L
Sbjct: 255 VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 314
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ PN VTF++LI E +++EA L+ ++ +P++FTY++LING
Sbjct: 315 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING----- 369
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
F + +D+AK +F M ++ P+VVTY ++I+GFC A
Sbjct: 370 ------------------FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
E L EM +G+ N VT+N ++ L + G D A ++ M+ GV P+ Y+ L
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG C G++ +A +F ++ +++Y+I+I G CK ++E L+ + KG+
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 531
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
KP+V+IY T+ E A LF EM+ DG ++ TY T I ++ + E
Sbjct: 532 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAE 591
Query: 377 LFRTLR 382
L + +R
Sbjct: 592 LIKEMR 597
Score = 197 bits (501), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 200/408 (49%), Gaps = 13/408 (3%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
+ D M M P V ++ G NK + V +L R+ + G PDL+TY ++N
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV-ALIDRMVARGCQPDLFTYGTVVNG 229
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK G + +L ++ + + V +T++I LC + +A LFT++ G PN
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFL 169
V TYN+LI L G A L +M F EG + +A++L+
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M +I+PD+ TY+S+I GFC + +EAK + M+ + PNVVT+N ++ CK
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
+++E L M Q G+ N YNTL+ G G + A+++F M S G + +YS
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
IL++G CK ++E AL ++ + ++PD+ YN + + + +VE + LF +
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
GV + Y T I G C+ EA LFR ++ + YN LI
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%)
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
++A L EM+ P++V FN ++ + K K D L + M + + + + YN L
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
++ FC ++ A + M +G + + S L+NGYC K I A++L +M
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+P+ V +NTL LF ++ A L D M G D +TY T ++GLCK I A+
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
L + + K E D+ Y +ID L
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDAL 265
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 73/137 (53%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP + +++IL L K + L +F+ L + + PD+YTYNI+I CK G+V G+
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ + PN + +T++I G C + EA ALF +++ G PN TYNTLI
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581
Query: 134 RTGHTIVALNLFEEMAS 150
R G + L +EM S
Sbjct: 582 RDGDKAASAELIKEMRS 598
Score = 92.0 bits (227), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 116/237 (48%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A +LF +M P +V + ++ N ++ L M + + ++ ++N+
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C+ ++ A +L M+++G P+ ++L++G+C R++ A L M M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
+++ LI+G + + A++L M+++G +PD+ Y T+ L + ++ A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
L +M++ + AD Y T ID LC + +A+ LF + ++ YN LI
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 283 bits (724), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 157/445 (35%), Positives = 241/445 (54%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P + FN L +AK K +D V+SL +++ + LYTYNILINCF
Sbjct: 72 LFGGMVKSRP-LPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCF 130
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM------------------ 104
C+ ++S +LG++++ + P+ VT +SL+ G C RI
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190
Query: 105 -----------------EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
EA AL ++ GC+PN+ TY ++NGL + G T +ALNL +
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNK 250
Query: 148 MASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M + E V F VD A LF +M+ + I P+VVTY+S+I C
Sbjct: 251 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 310
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++A LL +M+++ + PN+VTFN ++D K GK EA +L D MI+ + P+ F YN+
Sbjct: 311 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 370
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L++GFC+ R+++AK++F M S C V +Y+ LI G+CK+K +E L+ EM +G
Sbjct: 371 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 430
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ D V Y TL LF + A K+F +M DGV D TY +DGLC N + +A+
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
E+F ++ + +LDI Y +I+G+
Sbjct: 491 EVFDYMQKSEIKLDIYIYTTMIEGM 515
Score = 207 bits (527), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 187/366 (51%), Gaps = 23/366 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V FN + L K +H D L+LFK + + G+ P++ TY+ LI+C C GR S +L
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ PN VTF +LI E + +EA L+ + +P++FTYN+L+NG
Sbjct: 320 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNG----- 374
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
F + +DKAK++F M ++ PDVVTY ++I+GFC +
Sbjct: 375 ------------------FCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 416
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+ L EM +G+ + VT+ ++ L +G D A ++ M+ GV P+ Y+ L
Sbjct: 417 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 476
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG C G++ +A E+F M+ ++ Y+ +I G CK +++ L+ + KG+
Sbjct: 477 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 536
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
KP+VV YNT+ L ++ A+ L +M+ DG ++ TY T I ++ + E
Sbjct: 537 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAE 596
Query: 377 LFRTLR 382
L R +R
Sbjct: 597 LIREMR 602
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 127/276 (46%), Gaps = 24/276 (8%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
++D M+ R P + ++N L + D +F+ + S FPD+ TYN LI F
Sbjct: 352 LYDDMIK-RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK RV G + + + VT+T+LI+GL + A +F ++ G P++
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TY+ L++GL G ++KA E+F M+ I D+
Sbjct: 471 MTYSILLDGLCNNGK-----------------------LEKALEVFDYMQKSEIKLDIYI 507
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT++I G C A ++ L + +GV+PNVVT+N ++ LC + EA LL M
Sbjct: 508 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 567
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
+ G PN+ YNTL+ G + EL M S
Sbjct: 568 EDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%)
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++R + ++A L M+ P++V FN ++ + K K D L + M
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
++ + + YN L++ FC +++ A L M +G ++ + S L+NGYC K I
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A++L +M+ G +PD + + TL LF ++ A L D M + G + TY +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+GLCK A+ L + K E D+ +N +ID L
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 270
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 123/256 (48%), Gaps = 7/256 (2%)
Query: 149 ASGNGEF------GVEGF-VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
+SG+G++ G+ +D A LF M P +V + ++ ++
Sbjct: 47 SSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVIS 106
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
L +M + + T+N++++ C+ ++ A LL M+++G P+ ++L++G+C
Sbjct: 107 LGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC 166
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
R++ A L M MG +++ LI+G + + A++L M+ +G +P++V
Sbjct: 167 HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 226
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
Y + L + + A L ++M+ + AD + T ID LCK ++ +A+ LF+ +
Sbjct: 227 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286
Query: 382 RILKCELDIRAYNCLI 397
++ Y+ LI
Sbjct: 287 ETKGIRPNVVTYSSLI 302
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 281 bits (719), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 144/410 (35%), Positives = 234/410 (57%), Gaps = 13/410 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P V F+ F +A+ K ++ VL K+L G+ ++YT NI+INCF
Sbjct: 75 LFQEMIRSRPLPSLV-DFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCF 133
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ + + VLG++++ + P+ TF +LIKGL E ++ EA L ++ GC+P+V
Sbjct: 134 CRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDV 193
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
TYN+++NG+ R+G T +AL+L +M N + V +G +D A LF +
Sbjct: 194 VTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE 253
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M+ + I VVTY S++RG C A WN+ LL +M+ + + PNV+TFNV++D K GK
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ EA+ L MI G+ PN YNTLMDG+C+ R++ A + M C+ + +++
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI GYC K ++ + ++ + +G+ + V Y+ L + +++ A +LF EM G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
V D TY +DGLC N + +A+E+F L+ K +L I Y +I+G+
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Score = 175 bits (444), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 188/390 (48%), Gaps = 23/390 (5%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R V +++ + L ++ D +SLFK + + G+ + TYN L+ CK G+ +
Sbjct: 222 RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWND 281
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
G ++L ++ PN +TF L+ E ++ EA L+ ++ G PN+ TYNTL++
Sbjct: 282 GALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
G + ++ + +A + M +PD+VT+TS+I+G+
Sbjct: 342 G-----------------------YCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 378
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C ++ + + +G+ N VT+++++ C++GK+ A L M+ GV P+
Sbjct: 379 CMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDV 438
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
Y L+DG C G++ +A E+F ++ + Y+ +I G CK ++E A +L+
Sbjct: 439 MTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCS 498
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
+ KG+KP+V+ Y + L + + A L +M+ DG A + TY T I ++
Sbjct: 499 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGD 558
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + +L ++ D + +ID L
Sbjct: 559 LTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 112/237 (47%)
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
D A LF +M P +V ++ +N ++ G+ N+ T N++
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
++ C+ K A +L ++++G P+ +NTL+ G L G+V+ A L M GC
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
V +Y+ ++NG C++ + AL L +M + +K DV Y+T+ L ++ A
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
LF EM+ G+ + TY + + GLCK + L + + + ++ +N L+D
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 4/186 (2%)
Query: 219 NVIMDELCKNG----KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 274
NV E ++G K D+A L MI+ P+ ++ T + N +
Sbjct: 53 NVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCK 112
Query: 275 SMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIH 334
+E G H +++ +I+IN +C+ + A S+ G+++ G +PD +NTL LF
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172
Query: 335 QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYN 394
+V A L D M +G D TY + ++G+C++ A++L R + + D+ Y+
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232
Query: 395 CLIDGL 400
+ID L
Sbjct: 233 TIIDSL 238
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 280 bits (715), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 155/445 (34%), Positives = 239/445 (53%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P V FN LF +AK K Y+ VL+L K++ S G+ +YT +I+INCF
Sbjct: 75 LFRDMIQSRP-LPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCF 133
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ ++S+ F +G+I++ + P+ V F +L+ GLC E R+ EA L ++ G +P +
Sbjct: 134 CRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTL 193
Query: 123 FTYNTLINGLY-----------------------------------RTGHTIVALNLFEE 147
T NTL+NGL ++G T +A+ L +
Sbjct: 194 ITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 148 MASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M N + +G +D A LF +M+ + D++TY ++I GFC A
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++ LL +M+ + + PNVVTF+V++D K GK+ EA +LL M+Q G+ PN YN+
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNS 373
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L+DGFC R+ A ++ M S GC + +++ILINGYCK I+ L L+ EM +G
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRG 433
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ + V YNTL + ++E A KLF EM V D +Y+ +DGLC N + +A+
Sbjct: 434 VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKAL 493
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
E+F + K ELDI Y +I G+
Sbjct: 494 EIFGKIEKSKMELDIGIYMIIIHGM 518
Score = 193 bits (490), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 195/407 (47%), Gaps = 13/407 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M+ M P + + N L L N + L R+ TG P+ TY ++N
Sbjct: 180 LVDRMVEM-GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM 238
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G+ + +L ++ +AV ++ +I GLC + + A LF ++ + G + ++
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 298
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
TYNTLI G G L +M F EG + +A +L +
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKE 358
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M I P+ +TY S+I GFC N EA ++ M+ +G P+++TFN++++ CK +
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+D+ L M GV N YNTL+ GFC +G++ AK+LF M S + SY I
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L++G C N E+E AL ++G++ ++ D+ IY + + +V+ A+ LF + G
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
V D Y I LC+ + +A LFR + D YN LI
Sbjct: 539 VKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILI 585
Score = 177 bits (448), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 172/363 (47%), Gaps = 23/363 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
++I+ L K+ D +LF + G D+ TYN LI FC GR G +L ++
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+ +PN VTF+ LI E ++ EA L ++ G PN TYN+LI+G
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDG-------- 377
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
F E +++A ++ M + +PD++T+ +I G+C AN ++
Sbjct: 378 ---------------FCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDG 422
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
L EM +GV N VT+N ++ C++GK++ A +L M+ VRP+ Y L+DG
Sbjct: 423 LELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG 482
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
C G + +A E+F +E + Y I+I+G C +++ A L+ + KG+K D
Sbjct: 483 LCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLD 542
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
YN + L + +A LF +M +G A D TY I + A EL
Sbjct: 543 ARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIE 602
Query: 380 TLR 382
++
Sbjct: 603 EMK 605
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 121/249 (48%), Gaps = 2/249 (0%)
Query: 151 GNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG 210
+G G++ D A +LF M P V+ + + + L +M +G
Sbjct: 61 SSGLVGIKA--DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKG 118
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
+ ++ T +++++ C+ K+ A + ++++G P+ ++NTL++G CL RV+ A
Sbjct: 119 IAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEAL 178
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
EL M MG T+ + + L+NG C N ++ A+ L M+ G +P+ V Y + V+
Sbjct: 179 ELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM 238
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
+ Q A +L +M+ + D Y IDGLCK+ + A LF + I + DI
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 298
Query: 391 RAYNCLIDG 399
YN LI G
Sbjct: 299 ITYNTLIGG 307
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 279 bits (713), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 154/441 (34%), Positives = 239/441 (54%), Gaps = 48/441 (10%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ RP P + FN L +AK K +D V+SL +++ G+ +LYTYNILINCFC+
Sbjct: 1 MVKSRP-LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRS 59
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM---------------------- 104
++S +LG++++ + P+ VT +SL+ G C RI
Sbjct: 60 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119
Query: 105 -------------EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG 151
EA AL ++ GC+PN+ TY ++NGL + G +A NL +M +
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Query: 152 NGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
E V F VD A LF +M+ + I P+VVTY+S+I C W++A
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 239
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
LL +M+++ + PN+VTFN ++D K GK EA +L D MI+ + P+ F YN+L++G
Sbjct: 240 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 299
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
FC+ R+++AK++F M S C + +Y+ LI G+CK+K +E L+ EM +G+ D
Sbjct: 300 FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 359
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
V Y TL LF + A K+F +M DGV D TY +DGLC N + +A+E+F
Sbjct: 360 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 419
Query: 380 TLRILKCELDIRAYNCLIDGL 400
++ + +LDI Y +I+G+
Sbjct: 420 YMQKSEIKLDIYIYTTMIEGM 440
Score = 205 bits (521), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 185/366 (50%), Gaps = 23/366 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V FN + L K +H D L+LFK + + G+ P++ TY+ LI+C C GR S +L
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ PN VTF +LI E + +EA L + +P++FTYN+LING
Sbjct: 245 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING----- 299
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
F + +DKAK++F M ++ PD+ TY ++I+GFC +
Sbjct: 300 ------------------FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRV 341
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+ L EM +G+ + VT+ ++ L +G D A ++ M+ GV P+ Y+ L
Sbjct: 342 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 401
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG C G++ +A E+F M+ ++ Y+ +I G CK +++ L+ + KG+
Sbjct: 402 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 461
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
KP+VV YNT+ L ++ A+ L +M+ DG D+ TY T I ++ + E
Sbjct: 462 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 521
Query: 377 LFRTLR 382
L R +R
Sbjct: 522 LIREMR 527
Score = 122 bits (305), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 122/268 (45%), Gaps = 23/268 (8%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P + ++N L + D +F+ + S FPDL TYN LI FCK RV
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
G + + + VT+T+LI+GL + A +F ++ G P++ TY+ L++
Sbjct: 344 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 403
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
GL G ++KA E+F M+ I D+ YT++I G
Sbjct: 404 GLCNNGK-----------------------LEKALEVFDYMQKSEIKLDIYIYTTMIEGM 440
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C A ++ L + +GV+PNVVT+N ++ LC + EA LL M + G P++
Sbjct: 441 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDS 500
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMES 278
YNTL+ G + EL M S
Sbjct: 501 GTYNTLIRAHLRDGDKAASAELIREMRS 528
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
L+++ P V ++N + L + +L K++ G PD TYN LI + G
Sbjct: 456 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 515
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRI 103
+ ++ R +RSC + L+ + + R+
Sbjct: 516 KAASAELI-REMRSCRFVGDASTIGLVANMLHDGRL 550
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 277 bits (708), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 155/445 (34%), Positives = 241/445 (54%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P + F+ L +AK K +D V+S +++ G+ +LYTYNI+INC
Sbjct: 52 LFGEMVKSRPFPS-IVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCL 110
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL------------- 109
C+ ++S +LG++++ + P+ VT SL+ G C +RI EA AL
Sbjct: 111 CRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 170
Query: 110 --FT--------------------KLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
FT ++ V GC+P++ TY +INGL + G +ALNL +
Sbjct: 171 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK 230
Query: 148 MASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M G E V + VD A LF +M ++ I PDV TY+S+I C
Sbjct: 231 MEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 290
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++A LL +M+++ + PNVVTFN ++D K GK+ EA +L D MIQ + PN YN+
Sbjct: 291 WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNS 350
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L++GFC+ R++ A+++F M S C V +Y+ LING+CK K++ + L+ +M +G
Sbjct: 351 LINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRG 410
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ + V Y TL F+ + A +F +M DGV + TY T +DGLCKN + +A+
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
+F L+ K E DI YN + +G+
Sbjct: 471 VVFEYLQKSKMEPDIYTYNIMSEGM 495
Score = 210 bits (535), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 192/384 (50%), Gaps = 23/384 (5%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++ + L K +H D L+LF +++ G+ PD++TY+ LI+C C GR S +L
Sbjct: 240 VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 299
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+L PN VTF SLI E +++EA LF ++ +PN+ TYN+LING
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLING----- 354
Query: 137 HTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDW 196
F + +D+A+++F M ++ PDVVTY ++I GFC A
Sbjct: 355 ------------------FCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKV 396
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+ L +M +G+ N VT+ ++ + D A + M+ GV PN YNTL
Sbjct: 397 VDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTL 456
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+DG C G++ +A +F ++ +++Y+I+ G CK ++E L+ + KG+
Sbjct: 457 LDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGV 516
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
KPDV+ YNT+ + E A+ LF +M+ DG D+ TY T I ++ + E
Sbjct: 517 KPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 576
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
L + +R + D Y + D L
Sbjct: 577 LIKEMRSCRFAGDASTYGLVTDML 600
Score = 108 bits (269), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 137/269 (50%), Gaps = 5/269 (1%)
Query: 129 INGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIR 188
+ G+Y +G ++ + + E S N ++ +D+A +LF +M P +V ++ ++
Sbjct: 19 LRGIYFSG---LSYDGYREKLSRNALLHLK--LDEAVDLFGEMVKSRPFPSIVEFSKLLS 73
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRP 248
++ +M GV N+ T+N++++ LC+ ++ A +L M+++G P
Sbjct: 74 AIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGP 133
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
+ N+L++GFC R++ A L M MG +++ L++G ++ + A++L
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
M+ KG +PD+V Y + L + + + A L ++M++ + AD Y T ID LCK
Sbjct: 194 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKY 253
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLI 397
++ +A+ LF + D+ Y+ LI
Sbjct: 254 RHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Score = 36.2 bits (82), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
L+++ P V ++N + K + +LF ++ G PD TYN LI + G
Sbjct: 511 LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570
Query: 68 VSHGFVVLGRILRSC-FTPNAVTFTSLIKGLCAESRI 103
+ ++ + +RSC F +A T+ L+ + + R+
Sbjct: 571 KAASAELI-KEMRSCRFAGDASTY-GLVTDMLHDGRL 605
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 274 bits (700), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 152/445 (34%), Positives = 240/445 (53%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P + FN L +AK K +D V+SL +++ G+ +LYTYNILINCF
Sbjct: 72 LFGGMVKSRPLPS-IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCF 130
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM------------------ 104
C+ ++S +LG++++ + P+ VT +SL+ G C RI
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190
Query: 105 -----------------EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
EA AL ++ GC+PN+ TY ++NGL + G +A NL +
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK 250
Query: 148 MASGNGEFGVEGFV------------DKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M + E V + D A LF +M+++ + P+V+TY+S+I C
Sbjct: 251 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYER 310
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++A LL +M+++ + PNVVTFN ++D K GK+ EA +L D MI+ + P+ F Y++
Sbjct: 311 WSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 370
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L++GFC+ R++ AK +F M S C V +Y+ LING+CK K I+ + L+ EM +G
Sbjct: 371 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG 430
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ + V Y TL F+ + A +F +M DGV + TY T +DGLCKN + +A+
Sbjct: 431 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 490
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
+F L+ K E I YN +I+G+
Sbjct: 491 VVFEYLQRSKMEPTIYTYNIMIEGM 515
Score = 179 bits (453), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 167/315 (53%), Gaps = 12/315 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++ + L K +H D L+LF + + G+ P++ TY+ LI+C C R S +L
Sbjct: 260 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLS 319
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ PN VTF +LI E +++EA L+ ++ +P++FTY++LING
Sbjct: 320 DMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 379
Query: 137 HTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYT 184
A ++FE M S + F +D+ ELF +M + + VTYT
Sbjct: 380 RLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYT 439
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
++I GF A D + A+ + +M+ GV PN++T+N ++D LCKNGK+++A + + + +
Sbjct: 440 TLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 499
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
+ P + YN +++G C G+V +LF S+ G V Y+ +I+G+C+ E A
Sbjct: 500 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEA 559
Query: 305 LSLYGEMLSKGIKPD 319
+L+ +M G PD
Sbjct: 560 DALFRKMREDGPLPD 574
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 150/317 (47%), Gaps = 23/317 (7%)
Query: 83 FTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVAL 142
F+ + + +++ ++ +A LF + P++F +N L++ + + + +
Sbjct: 46 FSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVI 105
Query: 143 NLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
+L E +M+ I+ ++ TY +I FC + + A L
Sbjct: 106 SLGE-----------------------KMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
L +MM G +P++VT + +++ C ++ +A L+D M+++G RP+ + TL+ G L
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
+ + A L M GC + +Y +++NG CK +I+ A +L +M + I+ +VVI
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
Y+T+ L + + A LF EM+ GV + TY + I LC +A L +
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 383 ILKCELDIRAYNCLIDG 399
K ++ +N LID
Sbjct: 323 ERKINPNVVTFNALIDA 339
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 117/255 (45%), Gaps = 18/255 (7%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC---KMGR 67
R P V +FN L K L+ + + PD++TY+ LIN FC ++
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
H F ++ I + CF PN VT+ +LI G C RI E LF ++ G N TY T
Sbjct: 384 AKHMFELM--ISKDCF-PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDEN 175
LI+G ++ A +F++M S + G ++KA +F ++
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 500
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+ P + TY +I G C A + L + +GV+P+V+ +N ++ C+ G +EA
Sbjct: 501 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEAD 560
Query: 236 RLLDLMIQIGVRPNA 250
L M + G P++
Sbjct: 561 ALFRKMREDGPLPDS 575
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%)
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++R ++ ++A L M+ P++ FN ++ + K K D L + M
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
++G+ N + YN L++ FC +++ A L M +G ++ + S L+NGYC K I
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A++L +M+ G +PD + + TL LF ++ A L D M + G + TY +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+GLCK I A L + K E ++ Y+ +ID L
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL 270
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 125/259 (48%), Gaps = 7/259 (2%)
Query: 149 ASGNGEF------GVEGF-VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
+SG+G++ G+ +D A LF M P + + ++ ++
Sbjct: 47 SSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVIS 106
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
L +M G+ N+ T+N++++ C+ ++ A LL M+++G P+ ++L++G+C
Sbjct: 107 LGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC 166
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
R++ A L M MG +++ LI+G + + A++L M+ +G +P++V
Sbjct: 167 HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 226
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
Y + L + ++ AF L ++M+ + A+ Y T ID LCK + +A+ LF +
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
Query: 382 RILKCELDIRAYNCLIDGL 400
++ Y+ LI L
Sbjct: 287 ENKGVRPNVITYSSLISCL 305
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 272 bits (695), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 151/445 (33%), Positives = 236/445 (53%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M++ RP P V F+ LF +AK K YD VL+L K++ G+ +LYT +I+INCF
Sbjct: 75 LFRDMIHSRPLPT-VIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCF 133
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRI------------------- 103
C+ ++ F +G+I++ + PN +TF++LI GLC E R+
Sbjct: 134 CRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDL 193
Query: 104 ----------------MEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
EA L K+ +GC+PN TY ++N + ++G T +A+ L +
Sbjct: 194 ITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 148 MASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M N + G +D A LF +M+ + I +++TY +I GFC A
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 313
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++ LL +M+ + + PNVVTF+V++D K GK+ EA L MI G+ P+ Y +
Sbjct: 314 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 373
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L+DGFC +++A ++ M S GC + +++ILINGYCK I+ L L+ +M +G
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ D V YNTL E+ ++ A +LF EM V + TY+ +DGLC N +A+
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL 493
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
E+F + K ELDI YN +I G+
Sbjct: 494 EIFEKIEKSKMELDIGIYNIIIHGM 518
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 116/239 (48%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
D A +LF M P V+ ++ + ++ L +M +G+ N+ T ++
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C+ K+ A + +I++G PN ++TL++G CL GRV+ A EL M MG
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
+ + + L+NG C + + A+ L +M+ G +P+ V Y + V+ + Q A
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+L +M+ + D Y IDGLCK+ + A LF + + +I YN LI G
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%)
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
++Y +R ++A L +M+ P V+ F+ + + K + D L
Sbjct: 54 LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 113
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M G+ N + + +++ FC ++ A + +G ++S LING C
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ AL L M+ G KPD++ NTL L + A L D+M G + TY
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++ +CK+ A+EL R + +LD Y+ +IDGL
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 1/146 (0%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M++ R PP + ++ IL L N + L +F+++ + + D+ YNI+I+
Sbjct: 460 LFQEMVS-RKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +V + + + P T+ +I GLC + + EA LF K+ G P+
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 578
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEM 148
+TYN LI G ++ L EE+
Sbjct: 579 WTYNILIRAHLGDGDATKSVKLIEEL 604
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
L ++ P V ++NI+ G L K LF+++ G PD +TYNILI G
Sbjct: 534 LPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGD 593
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLI 94
+ ++ + R F+ +A T +I
Sbjct: 594 ATKSVKLIEELKRCGFSVDASTIKMVI 620
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 270 bits (691), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 137/398 (34%), Positives = 229/398 (57%), Gaps = 24/398 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P V FN L + K K YD V+SL K++ G+ DLYT+NI+INCF
Sbjct: 72 LFSDMVKSRPFPSIV-DFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCF 130
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +VS +LG++L+ + P+ VT SL+ G C +R+ +A +L K+ G +P++
Sbjct: 131 CCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDI 190
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
YN +I+ L +T V+ A + F +++ + I P+VVT
Sbjct: 191 VAYNAIIDSLCKTKR-----------------------VNDAFDFFKEIERKGIRPNVVT 227
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+++ G C ++ W++A LL +M+ + + PNV+T++ ++D KNGK+ EA L + M+
Sbjct: 228 YTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
++ + P+ Y++L++G CL R++ A ++F M S GC V SY+ LING+CK K +E
Sbjct: 288 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
+ L+ EM +G+ + V YNTL F+ V++A + F +M G++ D WTY +
Sbjct: 348 DGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GLC N + +A+ +F ++ + +LDI Y +I G+
Sbjct: 408 GGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGM 445
Score = 111 bits (278), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 122/259 (47%), Gaps = 21/259 (8%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ M+ M P V +++ L L + D +F + S G D+ +YN LIN F
Sbjct: 282 LFEEMVRMSIDPDIV-TYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 340
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK RV G + + + N VT+ +LI+G + +A F+++ FG P++
Sbjct: 341 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
+TYN L+ GL G AL +FE+M + + G V++A LF
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 460
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ + + PD+VTYT+++ G C +E + L +M +G+ N T + +G
Sbjct: 461 LSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS--------DGD 512
Query: 231 MDEASRLLDLMIQIGVRPN 249
+ ++ L+ M+ G P+
Sbjct: 513 ITLSAELIKKMLSCGYAPS 531
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 118/240 (49%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
++ A +LF M P +V + ++ ++ L +M G++ ++ TFN+
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C ++ A +L M+++G P+ +L++GFC RV+ A L M +G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
+ +Y+ +I+ CK K + A + E+ KGI+P+VV Y L L + A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+L +M + + + TY +D KN ++EA ELF + + + DI Y+ LI+GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 82/171 (47%)
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+++A L M++ P+ +N L+ + + L ME +G + +++++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
I+IN +C ++ ALS+ G+ML G +PD V +L ++V A L D+M
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G D Y ID LCK + +A + F+ + ++ Y L++GL
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 270 bits (691), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/446 (34%), Positives = 243/446 (54%), Gaps = 48/446 (10%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
+F M+ RP P + F+ L +AK +D V+SL +++ + G+ + YTY+ILINC
Sbjct: 67 ALFGEMVKSRPFPS-IIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINC 125
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
FC+ ++ VLG++++ + PN VT +SL+ G C RI EA AL ++ V G +PN
Sbjct: 126 FCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPN 185
Query: 122 VFTYNTLINGLY-----------------------------------RTGHTIVALNLFE 146
T+NTLI+GL+ + G T +A NL
Sbjct: 186 TVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLN 245
Query: 147 EMASGNGEFGV-------EGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+M G E GV +G +D A LF +M+ + I P+VVTY+S+I C
Sbjct: 246 KMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
W++A LL +M+++ + P+V TF+ ++D K GK+ EA +L D M++ + P+ Y+
Sbjct: 306 RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L++GFC+ R++ AK++F M S C V +Y+ LI G+CK K +E + ++ EM +
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 425
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+ + V YN L LF+ + A ++F EM DGV + TY T +DGLCKN + +A
Sbjct: 426 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ +F L+ K E I YN +I+G+
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGM 511
Score = 210 bits (534), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 189/368 (51%), Gaps = 23/368 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N + L K KH D L+LFK + + G+ P++ TY+ LI+C C GR S +
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+ TF++LI E +++EA L+ ++ +P++ TY++LING
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING--- 370
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
F + +D+AK++F M ++ PDVVTY ++I+GFC
Sbjct: 371 --------------------FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 410
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
E + EM +G+ N VT+N+++ L + G D A + M+ GV PN YN
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+DG C G++ +A +F ++ T+++Y+I+I G CK ++E L+ + K
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 530
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+KPDVV YNT+ E A LF EM+ DG ++ Y T I ++ +
Sbjct: 531 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590
Query: 375 VELFRTLR 382
EL + +R
Sbjct: 591 AELIKEMR 598
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 131/296 (44%), Gaps = 14/296 (4%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P V +F+ L K L+ + + P + TY+ LIN FC R+
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 71 GFVVLG-RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
+ + + CF P+ VT+ +LIKG C R+ E +F ++ G N TYN LI
Sbjct: 380 AKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 130 NGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENIN 177
GL++ G +A +F+EM S + G ++KA +F ++ +
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P + TY +I G C A + L + +GV+P+VV +N ++ C+ G +EA L
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
M + G PN+ YNTL+ G + EL M S G + ++ N
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 144/301 (47%), Gaps = 23/301 (7%)
Query: 99 AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE 158
+E ++ +A ALF ++ P++ ++ L++ + + V ++L E
Sbjct: 58 SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGE------------ 105
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
QM++ I + TY+ +I FC + A +L +MM G +PN+VT
Sbjct: 106 -----------QMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTL 154
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
+ +++ C + ++ EA L+D M G +PN +NTL+ G L + + A L M +
Sbjct: 155 SSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVA 214
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
GC + +Y +++NG CK + + A +L +M ++P V+IYNT+ L + ++
Sbjct: 215 KGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDD 274
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A LF EM+ G+ + TY + I LC +A L + K D+ ++ LID
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334
Query: 399 G 399
Sbjct: 335 A 335
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 122/240 (50%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A LF +M P ++ ++ ++ N ++ L +M + G+ N T+++
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C+ ++ A +L M+++G PN ++L++G+C + R++ A L M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
+++ LI+G + + A++L M++KG +PD+V Y + L + + AF
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
L ++M++ + Y T IDGLCK ++ +A+ LF+ + ++ Y+ LI L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 270 bits (690), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 151/445 (33%), Positives = 241/445 (54%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P + F+ L +AK +D V+SL +++ + G+ +LYTY+ILINCF
Sbjct: 68 LFGDMVKSRPFPS-IVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCF 126
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM------------------ 104
C+ ++S VL ++++ + P+ VT SL+ G C +RI
Sbjct: 127 CRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDS 186
Query: 105 -----------------EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
EA AL ++ V GC+P++ TY ++NGL + G +AL+L ++
Sbjct: 187 FTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKK 246
Query: 148 MASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M G E GV + V+ A LF +M ++ I P+VVTY S+IR C
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++A LL +M+++ + PNVVTF+ ++D K GK+ EA +L D MI+ + P+ F Y++
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 366
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L++GFC+ R++ AK +F M S C V +Y+ LI G+CK K ++ + L+ EM +G
Sbjct: 367 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG 426
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ + V Y TL F+ + + A +F +M DGV D TY +DGLC N + A+
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL 486
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
+F L+ K E DI YN +I+G+
Sbjct: 487 VVFEYLQRSKMEPDIYTYNIMIEGM 511
Score = 193 bits (490), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 184/368 (50%), Gaps = 23/368 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N + L K+ + L+LF +++ G+ P++ TYN LI C C GR S +
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ PN VTF++LI E +++EA L+ ++ +P++FTY++LING
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING--- 370
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
F + +D+AK +F M ++ P+VVTY ++I+GFC A
Sbjct: 371 --------------------FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+E L EM +G+ N VT+ ++ + + D A + M+ GV P+ Y+
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYS 470
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DG C G+V A +F ++ +++Y+I+I G CK ++E L+ + K
Sbjct: 471 ILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 530
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+KP+VV Y T+ E A LF EM+ +G D+ TY T I ++ +
Sbjct: 531 GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAAS 590
Query: 375 VELFRTLR 382
EL R +R
Sbjct: 591 AELIREMR 598
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 124/276 (44%), Gaps = 24/276 (8%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
++D M+ R P + +++ L + D +F+ + S FP++ TYN LI F
Sbjct: 348 LYDEMIK-RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 406
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK RV G + + + N VT+T+LI G A +F ++ G P++
Sbjct: 407 CKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDI 466
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TY+ L++GL G AL +FE ++ ++K + PD+ T
Sbjct: 467 MTYSILLDGLCNNGKVETALVVFE-------------YLQRSK----------MEPDIYT 503
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I G C A + L + +GV+PNVVT+ +M C+ G +EA L M
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMK 563
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
+ G P++ YNTL+ G + EL M S
Sbjct: 564 EEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 116/237 (48%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A LF M P +V ++ ++ N ++ L +M + G+ N+ T+++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C+ ++ A +L M+++G P+ N+L++GFC R++ A L M MG
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
F+++ LI+G ++ A++L M+ KG +PD+V Y + L + ++ A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
L +M++ + Y T ID LC + +A+ LF + ++ YN LI
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 101/204 (49%)
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
++A L +M+ P++V F+ ++ + K K D L + M +G+ N + Y+ L
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
++ FC +++ A + M +G + + + L+NG+C I A+SL G+M+ G
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
+PD +NTL LF ++ A L D M G D TY ++GLCK I A+
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 377 LFRTLRILKCELDIRAYNCLIDGL 400
L + + K E + YN +ID L
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDAL 266
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 91/171 (53%)
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+D+A L M++ P+ ++ L+ + + L M+++G +H +++YS
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
ILIN +C+ ++ AL++ +M+ G +PD+V N+L +++ A L +M
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G D++T+ T I GL +++ EAV L + + C+ D+ Y +++GL
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL 231
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 268 bits (685), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 150/445 (33%), Positives = 238/445 (53%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ M+ RP P P+ FN L +A+ K YD VL K + G+ D+YT I+INC+
Sbjct: 57 LFESMIQSRPLPTPI-DFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCY 115
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL--------- 113
C+ ++ F VLGR + + P+ +TF++L+ G C E R+ EA AL ++
Sbjct: 116 CRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDL 175
Query: 114 --------------RV------------FGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
RV +G +P+ TY ++N L ++G++ +AL+LF +
Sbjct: 176 VTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRK 235
Query: 148 MASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M N + V +G D A LF +M+ + I DVVTY+S+I G C
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++ +L EM+ + + P+VVTF+ ++D K GK+ EA L + MI G+ P+ YN+
Sbjct: 296 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 355
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L+DGFC ++ A ++F M S GC + +YSILIN YCK K ++ + L+ E+ SKG
Sbjct: 356 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ P+ + YNTL + + ++ A +LF EM GV TY +DGLC N + +A+
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
E+F ++ + L I YN +I G+
Sbjct: 476 EIFEKMQKSRMTLGIGIYNIIIHGM 500
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/407 (31%), Positives = 203/407 (49%), Gaps = 13/407 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M+ M+ P V ++ G K + L L R+ G PD TY ++N
Sbjct: 162 LVDRMVEMKQRPDLVTVSTLINGLCLKGR-VSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G + + ++ + V ++ +I LC + +A +LF ++ + G + +V
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
TY++LI GL G + EM N F EG + +AKEL+ +
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M I PD +TY S+I GFC N +EA + M+ +G +P++VT++++++ CK +
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+D+ RL + G+ PN YNTL+ GFC +G++N AKELF M S G +V +Y I
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L++G C N E+ AL ++ +M + + IYN + + +V+ A+ LF + G
Sbjct: 461 LLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 520
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
V D TY I GLCK + EA LFR ++ C D YN LI
Sbjct: 521 VKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 200 bits (508), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 192/390 (49%), Gaps = 23/390 (5%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R V ++I+ L K+ +D LSLF + G+ D+ TY+ LI C G+
Sbjct: 239 RNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDD 298
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
G +L ++ P+ VTF++LI E +++EA L+ ++ G P+ TYN+LI+
Sbjct: 299 GAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID 358
Query: 131 GLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGF 190
G F E + +A ++F M + PD+VTY+ +I +
Sbjct: 359 G-----------------------FCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
C A ++ L E+ +G+ PN +T+N ++ C++GK++ A L M+ GV P+
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
Y L+DG C G +N+A E+F M+ T + Y+I+I+G C +++ A SL+
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 515
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
+ KG+KPDVV YN + L + + A LF +M+ DG D +TY I S
Sbjct: 516 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 575
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++ +VEL +++ D +ID L
Sbjct: 576 LISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M++ R PP V ++ IL L N + L +F+++ + + + YNI+I+
Sbjct: 442 LFQEMVS-RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 500
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +V + + + P+ VT+ +I GLC + + EA LF K++ GC P+
Sbjct: 501 CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 560
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEM 148
FTYN LI I ++ L EEM
Sbjct: 561 FTYNILIRAHLGGSGLISSVELIEEM 586
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 4/159 (2%)
Query: 224 ELCKNG----KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
E +NG K+++A L + MIQ P +N L T + + ME
Sbjct: 40 ERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELN 99
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G H +++ +I+IN YC+ K++ A S+ G G +PD + ++TL +V A
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
L D M D T T I+GLC + EA+ L
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLI 198
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 267 bits (682), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/445 (33%), Positives = 238/445 (53%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P + FN L +AK ++ V+SL +++ + G+ DLYTY+I INCF
Sbjct: 70 LFGDMVKSRPFPS-IVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF 128
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM------------------ 104
C+ ++S VL ++++ + P+ VT +SL+ G C RI
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 105 -----------------EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
EA AL ++ GC+P++ TY T++NGL + G +AL+L ++
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK 248
Query: 148 MASGNGEFGV-------EGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M G E V +G +D A LF +M ++ I PDV TY+S+I C
Sbjct: 249 MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 308
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++A LL +M+++ + PNVVTF+ ++D K GK+ EA +L D MI+ + P+ F Y++
Sbjct: 309 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 368
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L++GFC+ R++ AK +F M S C V +YS LI G+CK K +E + L+ EM +G
Sbjct: 369 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRG 428
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ + V Y TL F+ + A +F +M GV + TY +DGLCKN + +A+
Sbjct: 429 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 488
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
+F L+ E DI YN +I+G+
Sbjct: 489 VVFEYLQRSTMEPDIYTYNIMIEGM 513
Score = 206 bits (523), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 191/353 (54%), Gaps = 12/353 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +N + L K KH D L+LF +++ G+ PD++TY+ LI+C C GR S +L
Sbjct: 258 VVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 317
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ PN VTF++LI E +++EA L+ ++ +P++FTY++LING
Sbjct: 318 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 377
Query: 137 HTIVALNLFEEMASGNG-------EFGVEGF-----VDKAKELFLQMKDENINPDVVTYT 184
A ++FE M S + ++GF V++ ELF +M + + VTYT
Sbjct: 378 RLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYT 437
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 244
++I GF A D + A+ + +M+ GV PN++T+N+++D LCKNGK+ +A + + + +
Sbjct: 438 TLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS 497
Query: 245 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGA 304
+ P+ + YN +++G C G+V ELF ++ G + V +Y+ +I+G+C+ E A
Sbjct: 498 TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEA 557
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
SL +M G P+ YNTL E + +L EM+ G A D T
Sbjct: 558 DSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 131/285 (45%), Gaps = 18/285 (6%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC---KMGR 67
R P V +F+ L K L+ + + PD++TY+ LIN FC ++
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
H F ++ I + CF PN VT+++LIKG C R+ E LF ++ G N TY T
Sbjct: 382 AKHMFELM--ISKDCF-PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDEN 175
LI+G ++ A +F++M S + G + KA +F ++
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+ PD+ TY +I G C A + L + +GV PNV+ +N ++ C+ G +EA
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
LL M + G PN+ YNTL+ G + EL M S G
Sbjct: 559 SLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCG 603
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 121/237 (51%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
VD A +LF M P +V + ++ N + L +M G+ ++ T+++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
++ C+ ++ A +L M+++G P+ ++L++G+C + R++ A L M MG
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
F+++ LI+G + + A++L +M+ +G +PD+V Y T+ L + ++ A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
L +M++ + AD Y T IDGLCK ++ +A+ LF + D+ Y+ LI
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 26/208 (12%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
D +FK++ S G+ P++ TYNIL++ CK G+++ VV + RS P+ T+ +
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG 153
I+G+C ++ + LF L + G PNV YNT+I+G R G
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK--------------- 554
Query: 154 EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQP 213
++A L +MK++ P+ TY ++IR D + L+ EM G
Sbjct: 555 --------EEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAG 606
Query: 214 NVVTFNVIMDELCKNGKMDEASRLLDLM 241
+ T ++ + L +G++D++ LD++
Sbjct: 607 DASTIGLVTNML-HDGRLDKS--FLDML 631
Score = 88.2 bits (217), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 90/206 (43%), Gaps = 35/206 (16%)
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+D+A L M++ P+ +N L+ + L M+++G +H +++YS
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 290 ILI-----------------------------------NGYCKNKEIEGALSLYGEMLSK 314
I I NGYC +K I A++L +M+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G KPD + TL LF ++ A L D+M + G D TY T ++GLCK I A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ L + + K E D+ YN +IDGL
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGL 268
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+Y L P + ++NI+ + K + LF L+ G+ P++ YN +I+ F
Sbjct: 490 VFEY-LQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGF 548
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ G +L ++ PN+ T+ +LI+ + +A L ++R G +
Sbjct: 549 CRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDA 608
Query: 123 FTYNTLINGLY 133
T + N L+
Sbjct: 609 STIGLVTNMLH 619
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 267 bits (682), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 149/445 (33%), Positives = 234/445 (52%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M RP P + F+ LF +A+ K YD VL L K++ G+ +LYT +I+INC
Sbjct: 59 LFQEMTRSRPRPRLI-DFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCC 117
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ ++S F +G+I++ + P+ VTF++LI GLC E R+ EA L ++ G +P +
Sbjct: 118 CRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177
Query: 123 FTYNTLINGLY-----------------------------------RTGHTIVALNLFEE 147
T N L+NGL ++G T +A+ L +
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237
Query: 148 MASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M + +G +D A LF +M+ + D++ YT++IRGFCYA
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++ LL +M+ + + P+VV F+ ++D K GK+ EA L MIQ G+ P+ Y +
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L+DGFC ++++A + M S GC + +++ILINGYCK I+ L L+ +M +G
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ D V YNTL E+ ++E A +LF EM V D +Y+ +DGLC N +A+
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
E+F + K ELDI YN +I G+
Sbjct: 478 EIFEKIEKSKMELDIGIYNIIIHGM 502
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 191/414 (46%), Gaps = 47/414 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F+ L L L L R+ G P L T N L+N C G+VS ++
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL 199
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ R++ + F PN VT+ ++K +C + A L K+ + + Y+ +I+GL +
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259
Query: 135 TGHTIVALNLFEEMA--------------------SGNGEFGV----------------- 157
G A NLF EM +G + G
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 158 ----------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
EG + +A+EL +M I+PD VTYTS+I GFC N ++A +L M+
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+G PN+ TFN++++ CK +D+ L M GV + YNTL+ GFC G++
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
AKELF M S + SY IL++G C N E E AL ++ ++ ++ D+ IYN +
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+ +V+ A+ LF + GV D TY I GLCK + EA LFR +
Sbjct: 500 HGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM 553
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 118/238 (49%)
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
D A +LF +M P ++ ++ + ++ L +M +G+ N+ T +++
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
++ C+ K+ A + +I++G P+ ++TL++G CL GRV+ A EL M MG
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
T+ + + L+NG C N ++ A+ L M+ G +P+ V Y + V+ + Q A +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
L +M+ + D Y IDGLCK+ + A LF + I + DI Y LI G
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%)
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
V+Y +R ++A L EM +P ++ F+ + + + + D L
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M G+ N + + +++ C +++ A + +G ++S LING C
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ AL L M+ G KP ++ N L L +V A L D M G + TY
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +CK+ A+EL R + K +LD Y+ +IDGL
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGL 257
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 1/146 (0%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M++ R P + S+ IL L N + L +F+++ + + D+ YNI+I+
Sbjct: 444 LFQEMVSRRVRPD-IVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C +V + + + P+ T+ +I GLC + + EA LF K+ G PN
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEM 148
TYN LI G + L EE+
Sbjct: 563 CTYNILIRAHLGEGDATKSAKLIEEI 588
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
L ++ P V ++NI+ G L K LF+++ G P+ TYNILI G
Sbjct: 518 LPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGD 577
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLI 94
+ ++ I R F+ +A T ++
Sbjct: 578 ATKSAKLIEEIKRCGFSVDASTVKMVV 604
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 256 bits (654), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/445 (32%), Positives = 235/445 (52%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P + FN L +AK ++ V+SL +++ + G+ DLYTY+I INCF
Sbjct: 70 LFGDMVKSRPFPS-IVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF 128
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM------------------ 104
C+ ++S VL ++++ + P+ VT +SL+ G C RI
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 105 -----------------EAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
EA AL ++ GC+P++ TY T++NGL + G +ALNL +
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNK 248
Query: 148 MASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M + + V F V+ A +LF +M+ + I P+VVTY S+I C
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGR 308
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++A LL M+++ + PNVVTFN ++D K GK+ EA +L + MIQ + P+ YN
Sbjct: 309 WSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNL 368
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L++GFC+ R++ AK++F M S C + +Y+ LING+CK K +E + L+ EM +G
Sbjct: 369 LINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRG 428
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ + V Y T+ F+ + A +F +M + V D TY + GLC + A+
Sbjct: 429 LVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTAL 488
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
+F+ L+ + EL+I YN +I+G+
Sbjct: 489 VIFKYLQKSEMELNIFIYNTMIEGM 513
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 153/348 (43%), Gaps = 44/348 (12%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V FN + L K +H + + LF + + G+ P++ TYN LINC C GR S +L
Sbjct: 258 VVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLS 317
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+L PN VTF +LI E +++EA L ++ +P+ TYN LING
Sbjct: 318 NMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHN 377
Query: 137 HTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYT 184
A +F+ M S + ++ + V+ ELF +M + + VTYT
Sbjct: 378 RLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYT 437
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA---------- 234
++I+GF A D + A+ + +M+ V +++T+++++ LC GK+D A
Sbjct: 438 TIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKS 497
Query: 235 ----------------------SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
DL + ++P+ YNT++ G C + A +L
Sbjct: 498 EMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDL 557
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
F M+ G +Y+ LI ++ + + L EM S G D
Sbjct: 558 FRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDA 605
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 122/240 (50%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
VD A +LF M P +V + ++ N + L +M G+ ++ T+++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
++ C+ ++ A +L M+++G P+ ++L++G+C + R++ A L M MG
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
F+++ LI+G + + A++L +M+ +G +PD+V Y T+ L + ++ A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
L ++M+ + A+ + T ID LCK ++ AV+LF + ++ YN LI+ L
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 87/171 (50%)
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+D+A L M++ P+ +N L+ + L M+++G +H +++YS
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
I IN +C+ ++ AL++ +M+ G +PD+V ++L ++ A L D+M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G DT+T+ T I GL ++ EAV L + C+ D+ Y +++GL
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Score = 78.6 bits (192), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M++ R P + +++IL L DT L +FK L + + +++ YN +I
Sbjct: 455 VFKQMVSNR-VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGM 513
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G+V + + + P+ VT+ ++I GLC++ + EA LF K++ G PN
Sbjct: 514 CKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNS 570
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFL 169
TYNTLI R + L +EM S GFV A + L
Sbjct: 571 GTYNTLIRANLRDCDRAASAELIKEMRSS-------GFVGDASTISL 610
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 255 bits (651), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 143/445 (32%), Positives = 236/445 (53%), Gaps = 48/445 (10%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M RP P + F+ L +AK +D V+S +++ G+ +LYTYNILINCF
Sbjct: 65 LFGVMAQSRPFPS-IIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCF 123
Query: 63 C----------------KMG-------------------RVSHGFVVLGRILRSCFTPNA 87
C K+G R+S ++ +++ + P+
Sbjct: 124 CRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDT 183
Query: 88 VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
VTFT+LI GL ++ EA AL ++ GC+P++ TY ++NGL + G T +ALNL +
Sbjct: 184 VTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNK 243
Query: 148 MASGNGEFGVEGFV------------DKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M + E V + D A LF +M+++ + P+V+TY+S+I C
Sbjct: 244 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGR 303
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
W++A LL +M+++ + PN+VTF+ ++D K GK+ +A +L + MI+ + PN F Y++
Sbjct: 304 WSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSS 363
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L++GFC+ R+ AK++ M C V +Y+ LING+CK K ++ + L+ EM +G
Sbjct: 364 LINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRG 423
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+ + V Y TL F+ + A +F +M GV + TY +DGLCKN + +A+
Sbjct: 424 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 483
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
+F L+ E DI YN +I+G+
Sbjct: 484 VVFEYLQRSTMEPDIYTYNIMIEGM 508
Score = 152 bits (383), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 147/274 (53%), Gaps = 18/274 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V ++ + L K +H D L+LF + + G+ P++ TY+ LI+C C GR S +L
Sbjct: 253 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLS 312
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING---LY 133
++ PN VTF++LI + ++++A L+ ++ +PN+FTY++LING L
Sbjct: 313 DMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLD 372
Query: 134 RTGHTIVALNL------------FEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVV 181
R G L L + + +G F VDK ELF +M + + V
Sbjct: 373 RLGEAKQMLELMIRKDCLPNVVTYNTLING---FCKAKRVDKGMELFREMSQRGLVGNTV 429
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT++I GF A D + A+ + +M+ GV PN++T+N+++D LCKNGK+ +A + + +
Sbjct: 430 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 489
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
+ + P+ + YN +++G C G+ FV+
Sbjct: 490 QRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYFVA 523
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 87/171 (50%)
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
++D+A L +M Q P+ ++ L+ + + ME +G +H +++Y+
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
ILIN +C+ + AL+L G+M+ G +PD+V N+L +++ A L D+M
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G DT T+ T I GL ++ EAV L + C+ D+ Y +++GL
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGL 228
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 63/122 (51%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L K K D + LF+ ++ GL + TY LI+ F + + +V
Sbjct: 391 PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 450
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ PN +T+ L+ GLC ++ +A +F L+ EP+++TYN +I G+ +
Sbjct: 451 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Query: 135 TG 136
G
Sbjct: 511 AG 512
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P + ++NIL L KN + +F+ L + + PD+YTYNI+I CK G+ G
Sbjct: 461 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
Score = 35.8 bits (81), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 57/116 (49%)
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
T + Y ++ + E++ A+ L+G M P ++ ++ L + ++++ +
Sbjct: 42 TSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFG 101
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
++M+ G++ + +TY I+ C+ S + A+ L + L E DI N L++G
Sbjct: 102 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNG 157
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 252 bits (643), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 141/425 (33%), Positives = 228/425 (53%), Gaps = 64/425 (15%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F +M+ RP P + F L +AK K +D V++L L G+ DLYT N+L+NCF
Sbjct: 59 LFTHMVESRPLPS-IIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCF 117
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ + LG++++ F P+ VTFTSLI G C +R+ EA ++ ++ G +P+V
Sbjct: 118 CQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDV 177
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
Y T+I+ L + GH AL+LF+ QM++ I PDVV
Sbjct: 178 VMYTTIIDSLCKNGHVNYALSLFD-----------------------QMENYGIRPDVVM 214
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YTS++ G C + W +A LL M + ++P+V+TFN ++D K GK +A L + MI
Sbjct: 215 YTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI 274
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
++ + PN F Y +L++GFC+ G V+ A+++F ME+ GC V +Y+ LING+CK K+++
Sbjct: 275 RMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVD 334
Query: 303 GALSLYGE-----------------------------------MLSKGIKPDVVIYNTLF 327
A+ ++ E M+S+G+ P++ YN L
Sbjct: 335 DAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLL 394
Query: 328 VVLFEIHQVERAFKLFDEMQR---DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
L +V++A +F++MQ+ DGVA + WTY + GLC N + +A+ +F +R
Sbjct: 395 HCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMR-- 452
Query: 385 KCELD 389
K E+D
Sbjct: 453 KREMD 457
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 184/354 (51%), Gaps = 17/354 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + + L KN H + LSLF ++ + G+ PD+ Y L+N C GR +
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + P+ +TF +LI E + ++A L+ ++ PN+FTY +LING
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM 294
Query: 135 TGHTIVALNLFEEMASGNGEFG--------VEGF-----VDKAKELFLQMKDENINPDVV 181
G A +F M + G F + GF VD A ++F +M + + + +
Sbjct: 295 EGCVDEARQMFYLMET-KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT++I+GF N A+ + M+ +GV PN+ T+NV++ LC NGK+ +A + + M
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
Query: 242 IQI---GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
+ GV PN + YN L+ G C G++ +A +F M + +Y+I+I G CK
Sbjct: 414 QKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKA 473
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
+++ A++L+ + SKG+KP+VV Y T+ LF A LF +M+ DGV+
Sbjct: 474 GKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 114 bits (286), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 111/217 (51%)
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++R ++ +NEA L M++ P+++ F +++ + K K D L D +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+GV + + N LM+ FC + + A M +G + +++ LING+C +E
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+S+ +M+ GIKPDVV+Y T+ L + V A LFD+M+ G+ D Y + +
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+GLC + +A L R + K + D+ +N LID
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDA 256
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 127/273 (46%), Gaps = 35/273 (12%)
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
++A +LF M + P ++ +T ++ ++ L + GV ++ T N++
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
M+ C++ + AS L M+++G P+ + +L++GFCL R+ A + M MG
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL--------------- 326
V Y+ +I+ CKN + ALSL+ +M + GI+PDVV+Y +L
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 327 ----------------FVVLFEIHQVERAF----KLFDEMQRDGVAADTWTYRTFIDGLC 366
F L + E F +L++EM R +A + +TY + I+G C
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ EA ++F + C D+ AY LI+G
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLING 326
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 3/173 (1%)
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
+GK SRLLDL + N Y ++ + + N A +LF M ++
Sbjct: 18 SGKALSFSRLLDLSFWVRAFCN---YREILRNGLHSLQFNEALDLFTHMVESRPLPSIID 74
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
++ L+N K K+ + ++L + G+ D+ N L + Q A +M
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ G D T+ + I+G C + + EA+ + + + + D+ Y +ID L
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSL 187
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 251 bits (641), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 134/398 (33%), Positives = 221/398 (55%), Gaps = 27/398 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P + F+ + +AK+K+YD V+SLF + G+ DLY+YNI+INC
Sbjct: 56 LFCKMIQSRP-LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ R V+G++++ + P+ VT +SLI G C +R+ +A L +K+ G P+V
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
YNT+I+G + G V+ A ELF +M+ + + D VT
Sbjct: 175 VIYNTIIDGSCKIG-----------------------LVNDAVELFDRMERDGVRADAVT 211
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S++ G C + W++A L+ +M+ + + PNV+TF ++D K GK EA +L + M
Sbjct: 212 YNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMT 271
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ V P+ F YN+L++G C+ GRV+ AK++ M + GC V +Y+ LING+CK+K ++
Sbjct: 272 RRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
L+ EM +G+ D + YNT+ F+ + + A ++F M + TY +
Sbjct: 332 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILL 388
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GLC N + +A+ LF ++ + ELDI YN +I G+
Sbjct: 389 YGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGM 426
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 165/357 (46%), Gaps = 47/357 (13%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M+ P V +++ G N+ +D + L ++ G PD+ YN +I+ CK+G
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAI-DLVSKMEEMGFRPDVVIYNTIIDGSCKIG 188
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
V+ + R+ R +AVT+ SL+ GLC R +AA L + + PNV T+
Sbjct: 189 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 248
Query: 127 TLINGLYRTGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKD 173
+I+ + G A+ L+EEM NG + G VD+AK++ M
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING-LCMHGRVDEAKQMLDLMVT 307
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGV---------------------- 211
+ PDVVTY ++I GFC + +E L EM +G+
Sbjct: 308 KGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDA 367
Query: 212 ----------QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
+PN+ T+++++ LC N ++++A L + M + + + YN ++ G C
Sbjct: 368 AQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMC 427
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
G V A +LF S+ G V SY+ +I+G+C+ ++ + + LY +M G+ P
Sbjct: 428 KIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 101 bits (252), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 123/269 (45%), Gaps = 35/269 (13%)
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
+LF +M P +V ++ V+ + +++ L M G+ ++ ++N++++ L
Sbjct: 55 DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
C+ + A ++ M++ G P+ ++L++GFC RV A +L ME MG V
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL------------------- 326
Y+ +I+G CK + A+ L+ M G++ D V YN+L
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRD 234
Query: 327 ------------FVVLFEIHQVE----RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
F + ++ E A KL++EM R V D +TY + I+GLC +
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ EA ++ + C D+ YN LI+G
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLING 323
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 82/170 (48%)
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
++E L MIQ P+ ++ ++ + + LF ME G H ++SY+I
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+IN C+ ALS+ G+M+ G +PDVV ++L + ++V A L +M+ G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D Y T IDG CK + +AVELF + D YN L+ GL
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGL 219
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 249 bits (635), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/434 (30%), Positives = 221/434 (50%), Gaps = 49/434 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + L K + D + + + G+ PD TYN +++ +C G+
Sbjct: 229 PDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGF 288
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+ VT++ L+ LC R MEA +F + G +P + TY TL+ G Y
Sbjct: 289 LKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQG-YA 347
Query: 135 TGHTIVALNLFEEMASGNG-------------EFGVEGFVDKAKELFLQMKDENINPDVV 181
T +V ++ ++ NG + +G VD+A +F +M+ + +NP+ V
Sbjct: 348 TKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAV 407
Query: 182 TY-----------------------------------TSVIRGFCYANDWNEAKCLLIEM 206
TY S+I G C N W A+ L++EM
Sbjct: 408 TYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM 467
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+D+G+ N + FN I+D CK G++ E+ +L +LM++IGV+PN YNTL++G+CL G++
Sbjct: 468 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKM 527
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ A +L M S+G +YS LINGYCK +E AL L+ EM S G+ PD++ YN +
Sbjct: 528 DEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNII 587
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
LF+ + A +L+ + G + TY + GLCKN +A+++F+ L ++
Sbjct: 588 LQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDL 647
Query: 387 ELDIRAYNCLIDGL 400
+L+ R +N +ID L
Sbjct: 648 KLEARTFNIMIDAL 661
Score = 207 bits (527), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 141/486 (29%), Positives = 223/486 (45%), Gaps = 91/486 (18%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTG---LFPDLYTYNILI 59
+FD +L R + N +A++ V S + R+ G + PDL TY ILI
Sbjct: 37 VFDELLR-RGRGASIYGLNRALADVARDSPAAAV-SRYNRMARAGADEVTPDLCTYGILI 94
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGC 118
C C+ GR+ GF LG +++ F +A+ FT L+KGLCA+ R +A + ++ GC
Sbjct: 95 GCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGC 154
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG---------------EFGVEGFVDK 163
PNVF+YN L+ GL + AL L MA G F EG DK
Sbjct: 155 IPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDK 214
Query: 164 AKELFLQMKDENINPDVVTYTSVI-----------------------------------R 188
A + +M D I PDVVTY S+I
Sbjct: 215 AYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 274
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR------------ 236
G+C + EA L +M GV+P+VVT++++MD LCKNG+ EA +
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334
Query: 237 -----------------------LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
LLDLM++ G+ P+ +V++ L+ + G+V++A +F
Sbjct: 335 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVF 394
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
M G +Y +I CK+ +E A+ + +M+ +G+ P ++YN+L L
Sbjct: 395 SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTC 454
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
++ ERA +L EM G+ +T + + ID CK ++E+ +LF + + + ++ Y
Sbjct: 455 NKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITY 514
Query: 394 NCLIDG 399
N LI+G
Sbjct: 515 NTLING 520
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 166/404 (41%), Gaps = 49/404 (12%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P F+IL AK D + +F ++ GL P+ TY +I CK GRV +
Sbjct: 369 PDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLY 428
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCA----------------------------------- 99
+++ +P + + SLI GLC
Sbjct: 429 FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 488
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG-------- 151
E R++E+ LF + G +PNV TYNTLING G A+ L M S
Sbjct: 489 EGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVT 548
Query: 152 -----NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEM 206
NG + D A LF +M+ ++PD++TY +++G AK L + +
Sbjct: 549 YSTLINGYCKISRMED-ALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
+ G Q + T+N+I+ LCKN D+A ++ + + ++ A +N ++D GR
Sbjct: 608 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRN 667
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
+ AK+LFV+ S G ++Y ++ +E L+ M G D + N +
Sbjct: 668 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFI 727
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
L + ++ RA + + + T FID L Y
Sbjct: 728 VRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 771
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 242 bits (618), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 132/398 (33%), Positives = 216/398 (54%), Gaps = 24/398 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M++ RP P + F L +AK YD V+SLF+++ G+ P L T NI+++C
Sbjct: 70 LFTRMVHSRPLPS-IIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCV 128
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C + LG++++ F P+ VTFTSL+ G C +RI +A ALF ++ G +PNV
Sbjct: 129 CLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNV 188
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
TY TLI L + H ++ A ELF QM P+VVT
Sbjct: 189 VTYTTLIRCLCKNRH-----------------------LNHAVELFNQMGTNGSRPNVVT 225
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +++ G C W +A LL +MM + ++PNV+TF ++D K GK+ EA L ++MI
Sbjct: 226 YNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI 285
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
Q+ V P+ F Y +L++G C+ G ++ A+++F ME GC Y+ LI+G+CK+K +E
Sbjct: 286 QMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVE 345
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
+ ++ EM KG+ + + Y L + + + A ++F++M D TY +
Sbjct: 346 DGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL 405
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
DGLC N + +A+ +F +R + +++I Y +I G+
Sbjct: 406 DGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGM 443
Score = 188 bits (478), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 176/357 (49%), Gaps = 24/357 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD +L M P V ++ L CL KN+H + + LF ++ + G P++ TYN L+
Sbjct: 175 LFDQILGM-GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGL 233
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C++GR +L +++ PN +TFT+LI ++MEA L+ + P+V
Sbjct: 234 CEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDV 293
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
FTY +LINGL + G +D+A+++F M+ P+ V
Sbjct: 294 FTYGSLINGL-----------------------CMYGLLDEARQMFYLMERNGCYPNEVI 330
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT++I GFC + + + EM +GV N +T+ V++ C G+ D A + + M
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
P+ YN L+DG C G+V +A +F M + +Y+I+I G CK ++E
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVE 450
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYR 359
A L+ + SKG+KP+V+ Y T+ + A LF +M+ DG + Y+
Sbjct: 451 DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 115 bits (287), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 119/239 (49%)
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
+ A +LF +M P ++ +T ++ N ++ L +M G+ P + T N++
Sbjct: 65 NDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIV 124
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
M +C + + AS L M+++G P+ + +L++G+C R+ A LF + MG
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
V +Y+ LI CKN+ + A+ L+ +M + G +P+VV YN L L EI + A
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
L +M + + + T+ ID K ++EA EL+ + + D+ Y LI+GL
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 105/218 (48%)
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+Y ++R + +N+A L M+ P+++ F ++ + K + D L + M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+G+ P N +M CL+ + RA M +G + +++ L+NGYC I
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A++L+ ++L G KP+VV Y TL L + + A +LF++M +G + TY
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ GLC+ +A L R + + E ++ + LID
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDA 267
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 240 bits (612), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 136/400 (34%), Positives = 214/400 (53%), Gaps = 24/400 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F M++ +P P + F L A + Y+TV+ +++ G+ DLY++ ILI+
Sbjct: 56 FALFFEMVHSQP-LPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CFC+ R+S VLG++++ + P+ VTF SL+ G C +RI +A +L + G EP
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
NV YNTLI+GL + G +AL L EM + + + DV
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEM-----------------------EKKGLGADV 211
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY +++ G CY+ W++A +L +MM + + P+VVTF ++D K G +DEA L
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE 271
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
MIQ V PN YN++++G C+ GR+ AK+ F M S GC V +Y+ LI+G+CK +
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
++ + L+ M +G D+ YNTL ++ ++ A +F M V D T+
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ GLC N I A+ F +R + + I AYN +I GL
Sbjct: 392 LLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGL 431
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 107/247 (43%), Gaps = 35/247 (14%)
Query: 189 GFCYANDWNEAKCLLIEMMDQGVQPNVVT------------------------------- 217
GF ++ + +A L EM+ P++V
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 218 ----FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
F +++ C+ ++ A +L M+++G P+ + +L+ GFCL R+ A L
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 274 VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEI 333
+ M G V Y+ LI+G CKN E+ AL L EM KG+ DVV YNTL L
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 334 HQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAY 393
+ A ++ +M + + D T+ ID K + EA EL++ + + + Y
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 394 NCLIDGL 400
N +I+GL
Sbjct: 285 NSIINGL 291
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 233 bits (593), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 138/420 (32%), Positives = 218/420 (51%), Gaps = 31/420 (7%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ +R P + SFNIL C LS F +L G PD+ T+N L++ C R
Sbjct: 132 MEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDR 191
Query: 68 VSHGFVVLGRILRSCF---------------TPNAVTFTSLIKGLCAESRIMEAAALFTK 112
+S + G ++ + F TP +TF +LI GLC E R++EAAAL K
Sbjct: 192 ISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNK 251
Query: 113 LRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGF 160
+ G +V TY T++NG+ + G T ALNL +M + + V +G
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
A+ LF +M ++ I P+V TY +I GFC W++A+ LL +M+++ + P+V+TFN
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
++ K GK+ EA +L D M+ + P+ YN+++ GFC R + AK +F M S
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-- 429
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
V +++ +I+ YC+ K ++ + L E+ +G+ + YNTL E+ + A
Sbjct: 430 --PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LF EM GV DT T + G C+N + EA+ELF +++ K +LD AYN +I G+
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 547
Score = 199 bits (506), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 132/409 (32%), Positives = 202/409 (49%), Gaps = 17/409 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+ + +P V +FN L L +L ++ GL D+ TY ++N
Sbjct: 213 LFDQMVEIGLTPV-VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 271
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CKMG +L ++ + P+ V ++++I LC + +A LF+++ G PNV
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
FTYN +I+G G A L +M V EG + +A++L +
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 391
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M I PD VTY S+I GFC N +++AK M D P+VVTFN I+D C+ +
Sbjct: 392 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAK----HMFDLMASPDVVTFNTIIDVYCRAKR 447
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+DE +LL + + G+ N YNTL+ GFC +N A++LF M S G + +I
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L+ G+C+N+++E AL L+ + I D V YN + + + +V+ A+ LF + G
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
V D TY I G C S I +A LF ++ E D YN LI G
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 616
Score = 171 bits (434), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 180/357 (50%), Gaps = 8/357 (2%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + L K+ H+ LF + G+ P+++TYN +I+ FC GR S +
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+ +TF +LI E ++ EA L ++ P+ TYN++I G +
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 135 TGHTIVALNLFEEMASGN--------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
A ++F+ MAS + + VD+ +L ++ + + TY ++
Sbjct: 414 HNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I GFC ++ N A+ L EM+ GV P+ +T N+++ C+N K++EA L +++ +
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+ YN ++ G C +V+ A +LF S+ G V +Y+++I+G+C I A
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 593
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
L+ +M G +PD YNTL + +++++ +L EM+ +G + D +T + D
Sbjct: 594 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650
Score = 161 bits (408), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 184/395 (46%), Gaps = 48/395 (12%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
FDYM+ RP V N + G + D +SL++++ + ++Y++NILI CFC
Sbjct: 94 FDYMVRSRPFYTAV-DCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFC 152
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
++S + F KL G +P+V
Sbjct: 153 DCHKLSFSL-----------------------------------STFGKLTKLGFQPDVV 177
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
T+NTL++GL AL LF M GF++ A LF QM + + P V+T+
Sbjct: 178 TFNTLLHGLCLEDRISEALALFGYMVE-------TGFLE-AVALFDQMVEIGLTPVVITF 229
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
++I G C EA L+ +M+ +G+ +VVT+ I++ +CK G A LL M +
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
++P+ +Y+ ++D C G + A+ LF M G VF+Y+ +I+G+C
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A L +M+ + I PDV+ +N L + ++ A KL DEM + DT TY + I
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
G CK++ +A +F L D+ +N +ID
Sbjct: 410 GFCKHNRFDDAKHMFD----LMASPDVVTFNTIID 440
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 232 bits (592), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 133/433 (30%), Positives = 224/433 (51%), Gaps = 59/433 (13%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F +M+ RP P + F+ L ++K K YD V+ L++++ G+ +L T NIL+NCF
Sbjct: 68 LFFHMVQCRP-LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ ++S LG++++ P+ VTF SL+ G C R+ +A +F ++ G +PNV
Sbjct: 127 CRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNV 186
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
YNT+I+GL ++ VD A +L +M+ + I PDVVT
Sbjct: 187 VIYNTIIDGLCKSKQ-----------------------VDNALDLLNRMEKDGIGPDVVT 223
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y S+I G C + W++A ++ M + + P+V TFN ++D K G++ EA + MI
Sbjct: 224 YNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMI 283
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ + P+ Y+ L+ G C+ R++ A+E+F M S GC V +YSILINGYCK+K++E
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343
Query: 303 GALSLYGEMLSK-----------------------------------GIKPDVVIYNTLF 327
+ L+ EM + G+ P+++ YN L
Sbjct: 344 HGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLL 403
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCE 387
L + ++E+A + +MQ++G+ AD TY I G+CK + +A +++ +L
Sbjct: 404 HGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLM 463
Query: 388 LDIRAYNCLIDGL 400
DI Y ++ GL
Sbjct: 464 PDIWTYTTMMLGL 476
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 172/349 (49%), Gaps = 12/349 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +F L + L +F ++ G P++ YN +I+ CK +V + +
Sbjct: 149 PSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDL 208
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L R+ + P+ VT+ SLI GLC+ R +A + + + P+VFT+N LI+ +
Sbjct: 209 LNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVK 268
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVT 182
G A +EEM + + + + +D+A+E+F M + PDVVT
Sbjct: 269 EGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVT 328
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+ +I G+C + L EM +GV N VT+ +++ C+ GK++ A + M+
Sbjct: 329 YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
GV PN YN L+ G C G++ +A + M+ G + +Y+I+I G CK E+
Sbjct: 389 FCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVA 448
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
A +Y + +G+ PD+ Y T+ + L++ A LF +M+ DG+
Sbjct: 449 DAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGI 497
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 163/330 (49%), Gaps = 15/330 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M+ M P V +N + L K+K D L L R+ G+ PD+ TYN LI+
Sbjct: 173 MFDQMVGM-GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL 231
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C GR S ++ + + P+ TF +LI E R+ EA + ++ +P++
Sbjct: 232 CSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDI 291
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFG--------VEGF-----VDKAKELFL 169
TY+ LI GL A +F M S G F + G+ V+ +LF
Sbjct: 292 VTYSLLIYGLCMYSRLDEAEEMFGFMVS-KGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M + + VTYT +I+G+C A N A+ + M+ GV PN++T+NV++ LC NG
Sbjct: 351 EMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNG 410
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+++A +L M + G+ + YN ++ G C G V A +++ S+ G +++Y+
Sbjct: 411 KIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYT 470
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
++ G K A +L+ +M GI P+
Sbjct: 471 TMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 115/240 (47%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D + +LF M P + ++ ++ ++ L +M G+ N+ T N+
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
+++ C+ ++ A L MI++G P+ + +L++GFC RV A +F M MG
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
V Y+ +I+G CK+K+++ AL L M GI PDVV YN+L L + A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++ M + + D +T+ ID K + EA E + + + DI Y+ LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 4/181 (2%)
Query: 224 ELCKNG----KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
E+ +NG K+D++ L M+Q P+ ++ L+ + + L+ M+ +
Sbjct: 51 EMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQML 110
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G H + + +IL+N +C+ ++ ALS G+M+ G +P +V + +L +V A
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+FD+M G + Y T IDGLCK+ + A++L + D+ YN LI G
Sbjct: 171 LYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230
Query: 400 L 400
L
Sbjct: 231 L 231
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 231 bits (589), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 139/400 (34%), Positives = 214/400 (53%), Gaps = 24/400 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F ML RP P V F + +AK +D V+ L+ ++ + G+ DLY++ ILI+
Sbjct: 64 FSLFCEMLQSRPIPSIV-DFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CFC+ R+S +LG++++ F P+ VT SL+ G C +R EA +L + FG P
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 182
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
NV YNT+INGL + ++ A E+F M+ + I D
Sbjct: 183 NVVIYNTVINGLCKNRD-----------------------LNNALEVFYCMEKKGIRADA 219
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VTY ++I G + W +A LL +M+ + + PNV+ F ++D K G + EA L
Sbjct: 220 VTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKE 279
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
MI+ V PN F YN+L++GFC+ G + AK +F M S GC V +Y+ LI G+CK+K
Sbjct: 280 MIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKR 339
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+E + L+ EM +G+ D YNTL + ++ A K+F+ M GV+ D TY
Sbjct: 340 VEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNI 399
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+D LC N I +A+ + L+ + ++DI YN +I GL
Sbjct: 400 LLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 439
Score = 166 bits (419), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 170/366 (46%), Gaps = 27/366 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N + L KN+ + L +F + G+ D TYN LI+ GR + +
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ PN + FT+LI E ++EA L+ ++ PNVFTYN+LING
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING--- 298
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
F + G + AK +F M + PDVVTY ++I GFC +
Sbjct: 299 --------------------FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSK 338
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ L EM QG+ + T+N ++ C+ GK++ A ++ + M+ GV P+ YN
Sbjct: 339 RVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYN 398
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+D C G++ +A + ++ + +Y+I+I G C+ +++ A L+ + K
Sbjct: 399 ILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRK 458
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+KPD + Y T+ L A KL M+ DG Y D ++ Y +
Sbjct: 459 GVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY----DETLRDHYTSLS 514
Query: 375 VELFRT 380
EL +
Sbjct: 515 AELIKA 520
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 116/238 (48%)
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
D A LF +M P +V +T V+ N ++ L +M + G+ ++ +F ++
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
+ C+ ++ A LL M+++G RP+ +L++GFC R A L SM+ G
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
V Y+ +ING CKN+++ AL ++ M KGI+ D V YNTL L + A +
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
L +M + + + + ID K ++EA L++ + ++ YN LI+G
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Score = 85.1 bits (209), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%)
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +R + +++A L EM+ P++V F ++ + K K D L M
Sbjct: 47 YRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKME 106
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+G+ + + + L+ FC R++ A L M +G ++ + L+NG+C+ +
Sbjct: 107 NLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQ 166
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+SL M G P+VVIYNT+ L + + A ++F M++ G+ AD TY T I
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 226
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
GL + +A L R + K + ++ + LID
Sbjct: 227 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALID 262
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 85/171 (49%)
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K D+A L M+Q P+ + ++ + + L+ ME++G +H ++S++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
ILI+ +C+ + AL+L G+M+ G +P +V +L + ++ + A L D M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G + Y T I+GLCKN + A+E+F + D YN LI GL
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGL 229
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 231 bits (588), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/445 (31%), Positives = 229/445 (51%), Gaps = 49/445 (11%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ RP P + F+ L +AK +D V+SL +++ + G+ +LYTY+I IN F
Sbjct: 62 LFGDMVKSRPFPS-IVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYF 120
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL------------- 109
C+ ++S +LG++++ + P+ VT SL+ G C +RI EA AL
Sbjct: 121 CRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 180
Query: 110 --FT--------------------KLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
FT ++ V GC+P++ TY +INGL + G +ALNL +
Sbjct: 181 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK 240
Query: 148 MASGNGEFGV-------EGF-----VDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M G E V +G +D A +LF +M+ + I PDV TY +I C
Sbjct: 241 MEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGR 300
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG-VRPNAFVYN 254
W++A LL +M+++ + P++V FN ++D K GK+ EA +L D M++ P+ YN
Sbjct: 301 WSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYN 360
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
TL+ GFC RV E+F M G +Y+ LI+G+ + ++ + A ++ +M+S
Sbjct: 361 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 420
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+ PD++ YN L L VE A +F+ MQ+ + D TY T I+ LCK + +
Sbjct: 421 GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+LF +L + + ++ Y ++ G
Sbjct: 481 WDLFCSLSLKGVKPNVVTYTTMMSG 505
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 183/394 (46%), Gaps = 14/394 (3%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
+ D M+ M P V ++ G NK + V +L +R+ G PDL TY +IN
Sbjct: 166 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV-ALVERMVVKGCQPDLVTYGAVING 224
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
CK G +L ++ + + V + ++I GLC + +A LF K+ G +P+
Sbjct: 225 LCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 284
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFL 169
VFTYN LI+ L G A L +M N F EG + +A++L+
Sbjct: 285 VFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD 344
Query: 170 QM-KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+M K ++ PDVV Y ++I+GFC E + EM +G+ N VT+ ++ +
Sbjct: 345 EMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQA 404
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
D A + M+ GV P+ YN L+DG C G V A +F M+ + +Y
Sbjct: 405 RDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTY 464
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ +I CK ++E L+ + KG+KP+VV Y T+ E A LF EM+
Sbjct: 465 TTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE 524
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
DG ++ TY T I ++ + EL + +R
Sbjct: 525 DGPLPNSGTYNTLIRARLRDGDEAASAELIKEMR 558
Score = 175 bits (444), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 170/343 (49%), Gaps = 24/343 (6%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V +N + L K KH D LF ++ + G+ PD++TYN LI+C C GR S +L
Sbjct: 250 VVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLS 309
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPNVFTYNTLINGLYRT 135
+L P+ V F +LI E +++EA L+ ++ + C P+V YNTLI G +
Sbjct: 310 DMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKY 369
Query: 136 GHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
V++ E+F +M + + VTYT++I GF A D
Sbjct: 370 KR-----------------------VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
+ A+ + +M+ GV P+++T+N+++D LC NG ++ A + + M + ++ + Y T
Sbjct: 407 CDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTT 466
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
+++ C G+V +LF S+ G V +Y+ +++G+C+ E A +L+ EM G
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
P+ YNTL + +L EM+ G A D T+
Sbjct: 527 PLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF 569
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 122/237 (51%)
Query: 161 VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 220
+D A LF M P +V ++ ++ N ++ L +M + G+ N+ T+++
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
++ C+ ++ A +L M+++G P+ N+L++GFC R++ A L M MG
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAF 340
+++ L++G ++ + A++L M+ KG +PD+V Y + L + + + A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 341 KLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
L ++M++ + AD Y T IDGLCK ++ +A +LF + + D+ YN LI
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 89/171 (52%)
Query: 230 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYS 289
K+D+A L M++ P+ ++ L+ + + L M+++G +H +++YS
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 290 ILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD 349
I IN +C+ ++ AL++ G+M+ G P +V N+L +++ A L D+M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 350 GVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G DT T+ T + GL +++ EAV L + + C+ D+ Y +I+GL
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 225
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 227 bits (579), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 128/386 (33%), Positives = 200/386 (51%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + F+ L +AK Y+ V+SLF+ L G+ DLY++ LI+CFC+ R+S
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
LG++++ F P+ VTF SL+ G C +R EA +L ++ G EPNV YNT+I+ L
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G AL++ + MK I PDVVTY S+I ++
Sbjct: 197 KGQVNTALDVLK-----------------------HMKKMGIRPDVVTYNSLITRLFHSG 233
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
W + +L +MM G+ P+V+TF+ ++D K G++ EA + + MIQ V PN YN
Sbjct: 234 TWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYN 293
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L++G C+ G ++ AK++ + S G +Y+ LINGYCK K ++ + + M
Sbjct: 294 SLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRD 353
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G+ D YNTL+ + + A K+ M GV D +T+ +DGLC + I +A
Sbjct: 354 GVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKA 413
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ L+ K + I YN +I GL
Sbjct: 414 LVRLEDLQKSKTVVGIITYNIIIKGL 439
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 112/239 (46%)
Query: 162 DKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 221
+ A LF M + + P +V ++ ++ N + L + G+ ++ +F +
Sbjct: 61 NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120
Query: 222 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 281
+D C+ ++ A L M+++G P+ + +L++GFC R A L + +G
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 282 THTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFK 341
V Y+ +I+ C+ ++ AL + M GI+PDVV YN+L LF + +
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 342 LFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +M R G++ D T+ ID K ++EA + + + +I YN LI+GL
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL 299
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 103/216 (47%)
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +R ++ +N+A L +M + P++V F+ ++ + K K + L +
Sbjct: 47 YRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE 106
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+G+ + + + TL+D FC R++ A M +G ++ ++ L+NG+C
Sbjct: 107 MLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFY 166
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+SL +++ G +P+VVIYNT+ L E QV A + M++ G+ D TY + I
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
L + + + + + D+ ++ LID
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALID 262
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 69/135 (51%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++N L+ + + + R+ S G+ PD+YT+NIL++ C G++ V L +
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDL 420
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+S +T+ +IKGLC ++ +A LF L + G P+V TY T++ GL R
Sbjct: 421 QKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLW 480
Query: 139 IVALNLFEEMASGNG 153
A L+ +M +G
Sbjct: 481 REAHELYRKMQKEDG 495
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 227 bits (578), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/383 (32%), Positives = 192/383 (50%), Gaps = 24/383 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGR 77
S N++ K + L+ + + N G FPD YT+N L+N CK G V H ++
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 78 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGH 137
+L+ + P+ T+ S+I GLC + EA + ++ C PN TYNTLI+ L +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCK--- 377
Query: 138 TIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWN 197
E V++A EL + + I PDV T+ S+I+G C +
Sbjct: 378 --------------------ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 198 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 257
A L EM +G +P+ T+N+++D LC GK+DEA +L M G + YNTL+
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Query: 258 DGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIK 317
DGFC + A+E+F ME G + +Y+ LI+G CK++ +E A L +M+ +G K
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK 537
Query: 318 PDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVEL 377
PD YN+L +++A + M +G D TY T I GLCK + A +L
Sbjct: 538 PDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Query: 378 FRTLRILKCELDIRAYNCLIDGL 400
R++++ L AYN +I GL
Sbjct: 598 LRSIQMKGINLTPHAYNPVIQGL 620
Score = 214 bits (546), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 131/381 (34%), Positives = 196/381 (51%), Gaps = 14/381 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +FN L L K H + + + G PD+YTYN +I+ CK+G V V
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ +PN VT+ +LI LC E+++ EA L L G P+V T+N+LI GL
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
T + VA+ LFEEM S E +G +D+A + QM+ V+T
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I GFC AN EA+ + EM GV N VT+N ++D LCK+ ++++A++L+D MI
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G +P+ + YN+L+ FC G + +A ++ +M S GC + +Y LI+G CK +E
Sbjct: 533 MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM-QRDGVAADTWTYRTF 361
A L + KGI YN + LF + A LF EM +++ D +YR
Sbjct: 593 VASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIV 652
Query: 362 IDGLCK-NSYIVEAVELFRTL 381
GLC I EAV+ L
Sbjct: 653 FRGLCNGGGPIREAVDFLVEL 673
Score = 202 bits (515), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 206/410 (50%), Gaps = 13/410 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+ D+M++ P +N + L V +++ G+ PD+ T+N+LI
Sbjct: 138 LSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIK 197
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C+ ++ ++L + P+ TFT++++G E + A + ++ FGC
Sbjct: 198 ALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSW 257
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVE-------------GFVDKAKEL 167
+ + N +++G + G ALN +EM++ +G F + G V A E+
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEI 317
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
M E +PDV TY SVI G C + EA +L +M+ + PN VT+N ++ LCK
Sbjct: 318 MDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCK 377
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
+++EA+ L ++ G+ P+ +N+L+ G CLT A ELF M S GC F+
Sbjct: 378 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT 437
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQ 347
Y++LI+ C +++ AL++ +M G V+ YNTL + ++ A ++FDEM+
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Query: 348 RDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
GV+ ++ TY T IDGLCK+ + +A +L + + + D YN L+
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 157/338 (46%), Gaps = 23/338 (6%)
Query: 84 TPNAVTFTS----LIKGLCAESRIMEAAALF---TKLRVFGCEPNVFTYNTLINGLYRTG 136
+P++ +S L+ L ++ A LF +K F EP + Y ++ L R+G
Sbjct: 40 SPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPAL--YEEILLRLGRSG 97
Query: 137 HTIVALNLFEEMASGNGEFGVEGF---VDKAKELFLQ---------MKDE-NINPDVVTY 183
+ E+M S E G F ++ + LQ M DE + PD Y
Sbjct: 98 SFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFY 157
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
++ N + +M G++P+V TFNV++ LC+ ++ A +L+ M
Sbjct: 158 NRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPS 217
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G+ P+ + T+M G+ G ++ A + M GC+ + S +++++G+CK +E
Sbjct: 218 YGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVED 277
Query: 304 ALSLYGEMLSK-GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
AL+ EM ++ G PD +NTL L + V+ A ++ D M ++G D +TY + I
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
GLCK + EAVE+ + C + YN LI L
Sbjct: 338 SGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTL 375
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 90/242 (37%), Gaps = 59/242 (24%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M+ M P ++N L + + + + S G PD+ TY LI+
Sbjct: 527 LMDQMI-MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGL 585
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK GRV V ++LRS +++ G
Sbjct: 586 CKAGRVE----VASKLLRS-------------------------------IQMKGINLTP 610
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
YN +I GL+R T A+NLF EM N PD V+
Sbjct: 611 HAYNPVIQGLFRKRKTTEAINLFREMLEQN----------------------EAPPDAVS 648
Query: 183 YTSVIRGFCY-ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y V RG C EA L+E++++G P + ++ + L + +L++++
Sbjct: 649 YRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMV 708
Query: 242 IQ 243
+Q
Sbjct: 709 MQ 710
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 220 bits (561), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 203/387 (52%), Gaps = 28/387 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N++ K + LS+ R++ + PD+ TYN ++ C G++ V
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 75 LGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
L R+L R C+ P+ +T+T LI+ C +S + A L ++R GC P+V TYN L+NG+
Sbjct: 227 LDRMLQRDCY-PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ EG +D+A + M P+V+T+ ++R C
Sbjct: 286 K-----------------------EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
W +A+ LL +M+ +G P+VVTFN++++ LC+ G + A +L+ M Q G +PN+ Y
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
N L+ GFC +++RA E M S GC + +Y+ ++ CK+ ++E A+ + ++ S
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG P ++ YNT+ L + + +A KL DEM+ + DT TY + + GL + + E
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
A++ F + + +N ++ GL
Sbjct: 503 AIKFFHEFERMGIRPNAVTFNSIMLGL 529
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 194/415 (46%), Gaps = 52/415 (12%)
Query: 30 NKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVT 89
N HY +V NS+ D+ + N L + G + GF L ++ P+ +
Sbjct: 88 NGHYSSV-------NSSFALEDVESNNHLRQ-MVRTGELEEGFKFLENMVYHGNVPDIIP 139
Query: 90 FTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
T+LI+G C + +AA + L G P+V TYN +I+G + G AL++ + M+
Sbjct: 140 CTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS 199
Query: 150 SGNG---------EFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
G + +A E+ +M + PDV+TYT +I C + A
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
LL EM D+G P+VVT+NV+++ +CK G++DEA + L+ M G +PN +N ++
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 261 CLTGR-----------------------------------VNRAKELFVSMESMGCTHTV 285
C TGR + RA ++ M GC
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
SY+ L++G+CK K+++ A+ M+S+G PD+V YNT+ L + +VE A ++ ++
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ G + TY T IDGL K +A++L +R + D Y+ L+ GL
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Score = 182 bits (462), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 177/379 (46%), Gaps = 12/379 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N + L + + + R+ +PD+ TY ILI C+ V H +
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + TP+ VT+ L+ G+C E R+ EA + GC+PNV T+N ++ +
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
TG + A L +M V +G + +A ++ +M P+ ++
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++ GFC + A L M+ +G P++VT+N ++ LCK+GK+++A +L+ +
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS 441
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
G P YNT++DG G+ +A +L M + +YS L+ G + +++
Sbjct: 442 SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVD 501
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A+ + E GI+P+ V +N++ + L + Q +RA M G + +Y I
Sbjct: 502 EAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561
Query: 363 DGLCKNSYIVEAVELFRTL 381
+GL EA+EL L
Sbjct: 562 EGLAYEGMAKEALELLNEL 580
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 173/361 (47%), Gaps = 13/361 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D ML R P V ++ IL ++ + L + G PD+ TYN+L+N
Sbjct: 226 VLDRMLQ-RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 284
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK GR+ L + S PN +T +++ +C+ R M+A L + G P+V
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQ 170
T+N LIN L R G A+++ E+M + F E +D+A E +
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M PD+VTY +++ C +A +L ++ +G P ++T+N ++D L K GK
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+A +LLD M ++P+ Y++L+ G G+V+ A + F E MG +++
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
++ G CK+++ + A+ M+++G KP+ Y L L + A +L +E+ G
Sbjct: 525 IMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Query: 351 V 351
+
Sbjct: 585 L 585
>sp|Q9SZ20|PP339_ARATH Pentatricopeptide repeat-containing protein At4g26800
OS=Arabidopsis thaliana GN=At4g26800 PE=2 SV=2
Length = 514
Score = 218 bits (554), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 131/424 (30%), Positives = 211/424 (49%), Gaps = 61/424 (14%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRL-NSTGL--FPDLYTYNILINCFCKMGRVSHG 71
P + FN + +AK + YD V++L+KR+ N+ G+ PDLYT NIL+NCFC+ + S
Sbjct: 83 PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSA 142
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
LG++++ P+ VT +SL+ G C + I +A + ++ G + +V LI+
Sbjct: 143 LSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDT 202
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
L + + AL E+ +MKD I+P+VVTY+S+I G C
Sbjct: 203 LCKNRLVVPAL-----------------------EVLKRMKDRGISPNVVTYSSLITGLC 239
Query: 192 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 251
+ +A+ L EM + + PNV+TF+ ++D K GK+ + + +MIQ+ + PN F
Sbjct: 240 KSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVF 299
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG-------- 303
Y++L+ G C+ RV+ A ++ M S GCT V +YS L NG+ K+ ++
Sbjct: 300 TYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDM 359
Query: 304 ---------------------------ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQV 336
AL ++G M S G+ P++ YN + LF +V
Sbjct: 360 PQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEV 419
Query: 337 ERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCL 396
E+A F+ MQ+ D TY I G+CK + EA +LF L+ + E D +AY +
Sbjct: 420 EKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIM 479
Query: 397 IDGL 400
I L
Sbjct: 480 IAEL 483
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 169/374 (45%), Gaps = 50/374 (13%)
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
R F+ + + +++ + +A LF + P++ +N ++ + +
Sbjct: 40 RFWVRAFSGTTIDYREVLRSGLHNIKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQ 99
Query: 137 HTIVALNLFEEMASGNG-EFGVEGFV--------------DKAKELFLQMKDENINPDVV 181
V +NL++ + + G E + + A +M I PD+V
Sbjct: 100 MYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIV 159
Query: 182 TYTSVIRGFCYANDWNEA------------------KCLLIE-----------------M 206
T +S++ GFC +N +A +LI+ M
Sbjct: 160 TASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRM 219
Query: 207 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 266
D+G+ PNVVT++ ++ LCK+G++ +A R L M + PN ++ L+D + G++
Sbjct: 220 KDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKL 279
Query: 267 NRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTL 326
++ ++ M M VF+YS LI G C + ++ A+ + M+SKG P+VV Y+TL
Sbjct: 280 SKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTL 339
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKC 386
F+ +V+ KL D+M + GVAA+T + T I G + I A+ +F +
Sbjct: 340 ANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGL 399
Query: 387 ELDIRAYNCLIDGL 400
+IR+YN ++ GL
Sbjct: 400 IPNIRSYNIVLAGL 413
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 213 bits (543), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/380 (31%), Positives = 196/380 (51%), Gaps = 24/380 (6%)
Query: 20 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 79
+N L LA+ D + ++ + + P++YTYN ++N +CK+G V + +I+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 80 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTI 139
+ P+ T+TSLI G C + A +F ++ + GC N Y LI+GL
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGL------- 298
Query: 140 VALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEA 199
V +D+A +LF++MKD+ P V TYT +I+ C + +EA
Sbjct: 299 ----------------CVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEA 342
Query: 200 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 259
L+ EM + G++PN+ T+ V++D LC K ++A LL M++ G+ PN YN L++G
Sbjct: 343 LNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALING 402
Query: 260 FCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
+C G + A ++ MES + +Y+ LI GYCK+ + A+ + +ML + + PD
Sbjct: 403 YCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPD 461
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
VV YN+L + A++L M G+ D WTY + ID LCK+ + EA +LF
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFD 521
Query: 380 TLRILKCELDIRAYNCLIDG 399
+L ++ Y LIDG
Sbjct: 522 SLEQKGVNPNVVMYTALIDG 541
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 187/385 (48%), Gaps = 24/385 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ +L L ++ L+L K + TG+ P+++TY +LI+ C + +
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
LG++L PN +T+ +LI G C I +A + + PN TYN LI G +
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
+ V KA + +M + + PDVVTY S+I G C +
Sbjct: 441 SN------------------------VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSG 476
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+++ A LL M D+G+ P+ T+ ++D LCK+ +++EA L D + Q GV PN +Y
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYT 536
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DG+C G+V+ A + M S C +++ LI+G C + +++ A L +M+
Sbjct: 537 ALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G++P V L L + + A+ F +M G D TY TFI C+ +++A
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
++ +R D+ Y+ LI G
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLIKG 681
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 175/368 (47%), Gaps = 13/368 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++ +L L ++ L ++ GL P++ TYN LIN +CK G + V
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + +PN T+ LIKG C +S + +A + K+ P+V TYN+LI+G R
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474
Query: 135 TGHTIVALNLFEEM------------ASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+G+ A L M S V++A +LF ++ + +NP+VV
Sbjct: 475 SGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVM 534
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT++I G+C A +EA +L +M+ + PN +TFN ++ LC +GK+ EA+ L + M+
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV 594
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+IG++P L+ G + A F M S G +Y+ I YC+ +
Sbjct: 595 KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLL 654
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A + +M G+ PD+ Y++L ++ Q AF + M+ G T+ + I
Sbjct: 655 DAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Query: 363 DGLCKNSY 370
L + Y
Sbjct: 715 KHLLEMKY 722
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 201/424 (47%), Gaps = 31/424 (7%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++N R P ++ + L K+K + LF L G+ P++ Y LI+ +CK G
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+V ++L ++L PN++TF +LI GLCA+ ++ EA L K+ G +P V T
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDT 606
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDE 174
LI+ L + G A + F++M S + + EG + A+++ +M++
Sbjct: 607 ILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMREN 666
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD----------- 223
++PD+ TY+S+I+G+ N A +L M D G +P+ TF ++
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQK 726
Query: 224 ----ELCKNGKM---DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 276
ELC M D LL+ M++ V PNA Y L+ G C G + A+++F M
Sbjct: 727 GSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHM 786
Query: 277 E-SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
+ + G + + ++ L++ CK K+ A + +M+ G P + L L++ +
Sbjct: 787 QRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGE 846
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
ER +F + + G D ++ IDG+ K + ELF + C+ + Y+
Sbjct: 847 KERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSL 906
Query: 396 LIDG 399
LI+G
Sbjct: 907 LIEG 910
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 165/348 (47%), Gaps = 33/348 (9%)
Query: 52 LYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 111
+Y+Y L+ G V F + +++SC ++V + LC + E L
Sbjct: 123 VYSYASLLTLLINNGYVGVVFKIRLLMIKSC---DSVGDALYVLDLCRKMNKDERFELKY 179
Query: 112 KLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQM 171
KL + GC YNTL+N L R G VD+ K+++++M
Sbjct: 180 KL-IIGC------YNTLLNSLARFG-----------------------LVDEMKQVYMEM 209
Query: 172 KDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 231
++ + P++ TY ++ G+C + EA + ++++ G+ P+ T+ ++ C+ +
Sbjct: 210 LEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDL 269
Query: 232 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSIL 291
D A ++ + M G R N Y L+ G C+ R++ A +LFV M+ C TV +Y++L
Sbjct: 270 DSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVL 329
Query: 292 INGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGV 351
I C ++ AL+L EM GIKP++ Y L L + E+A +L +M G+
Sbjct: 330 IKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 389
Query: 352 AADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ TY I+G CK I +AV++ + K + R YN LI G
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG 437
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 91/183 (49%)
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
+N +++ L + G +DE ++ M++ V PN + YN +++G+C G V A + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
G F+Y+ LI GYC+ K+++ A ++ EM KG + + V Y L L +++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
A LF +M+ D TY I LC + EA+ L + + + +I Y LI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 398 DGL 400
D L
Sbjct: 366 DSL 368
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 53/129 (41%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD+M P FN L C K K ++ + + G P L + +LI
Sbjct: 782 VFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGL 841
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
K G G V +L+ + + + + +I G+ + + LF + GC+ +
Sbjct: 842 YKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSS 901
Query: 123 FTYNTLING 131
TY+ LI G
Sbjct: 902 QTYSLLIEG 910
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 213 bits (542), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 131/416 (31%), Positives = 213/416 (51%), Gaps = 20/416 (4%)
Query: 4 FDYM----LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILI 59
+DY+ +NM SP + SFN++ L K + D + +F+ + PD YTY L+
Sbjct: 171 YDYVVNSNMNMNISPNGL-SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLM 229
Query: 60 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 119
+ CK R+ ++L + +P+ V + LI GLC + + L + + GC
Sbjct: 230 DGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCV 289
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEMASG-----NGEFG--VEGFVDK-----AKEL 167
PN TYNTLI+GL G A++L E M S + +G + G V + A L
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRL 349
Query: 168 FLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 227
M++ + + Y+ +I G EA L +M ++G +PN+V ++V++D LC+
Sbjct: 350 LSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCR 409
Query: 228 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS 287
GK +EA +L+ MI G PNA+ Y++LM GF TG A +++ M+ GC+ F
Sbjct: 410 EGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFC 469
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM- 346
YS+LI+G C ++ A+ ++ +ML+ GIKPD V Y+++ L I ++ A KL+ EM
Sbjct: 470 YSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529
Query: 347 --QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ D TY +DGLC I AV+L ++ C+ D+ N ++ L
Sbjct: 530 CQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTL 585
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 190/410 (46%), Gaps = 37/410 (9%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M + SP PV +N+L L K V L + G P+ TYN LI+
Sbjct: 244 LLDEMQSEGCSPSPVI-YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C G++ +L R++ S PN VT+ +LI GL + R +A L + + G N
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
Y+ LI+GL++ G A++L+ +MA + + EG ++AKE+ +
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNR 422
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
M P+ TY+S+++GF EA + EM G N ++V++D LC G+
Sbjct: 423 MIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGR 482
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM---ESMGCTHTVFS 287
+ EA + M+ IG++P+ Y++++ G C G ++ A +L+ M E V +
Sbjct: 483 VKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVT 542
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT---------------------L 326
Y+IL++G C K+I A+ L ML +G PDV+ NT L
Sbjct: 543 YNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEEL 602
Query: 327 FVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
V L + +V A + + M +A T T+ + +CK I A++
Sbjct: 603 VVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 175/387 (45%), Gaps = 28/387 (7%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRL-NSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGR 77
SF ++F K D + LF R+ + + ++N ++N G G
Sbjct: 114 SFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDY 173
Query: 78 ILRSCF----TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
++ S +PN ++F +IK LC + A +F + C P+ +TY TL++GL
Sbjct: 174 VVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLC 233
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
+ E +D+A L +M+ E +P V Y +I G C
Sbjct: 234 K-----------------------EERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKK 270
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
D L+ M +G PN VT+N ++ LC GK+D+A LL+ M+ PN Y
Sbjct: 271 GDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTY 330
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
TL++G R A L SME G YS+LI+G K + E A+SL+ +M
Sbjct: 331 GTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAE 390
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG KP++V+Y+ L L + A ++ + M G + +TY + + G K E
Sbjct: 391 KGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEE 450
Query: 374 AVELFRTLRILKCELDIRAYNCLIDGL 400
AV++++ + C + Y+ LIDGL
Sbjct: 451 AVQVWKEMDKTGCSRNKFCYSVLIDGL 477
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 213 bits (541), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 189/362 (52%), Gaps = 12/362 (3%)
Query: 50 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 109
PD++ YN LIN FCKM R+ VL R+ F+P+ VT+ +I LC+ ++ A +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 110 FTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------ 157
+L C+P V TY LI G AL L +EM S + +
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 158 EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVT 217
EG VD+A E+ ++ + PDV++Y ++R W E + L+ +M + PNVVT
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 218 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 277
+++++ LC++GK++EA LL LM + G+ P+A+ Y+ L+ FC GR++ A E +M
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
S GC + +Y+ ++ CKN + + AL ++G++ G P+ YNT+F L+
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
RA + EM +G+ D TY + I LC+ + EA EL +R + + YN ++
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515
Query: 398 DG 399
G
Sbjct: 516 LG 517
Score = 172 bits (437), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 180/391 (46%), Gaps = 13/391 (3%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ D M + SP V ++NI+ G L D L + +L S P + TY ILI
Sbjct: 180 VLDRMRSKDFSPDTV-TYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEAT 238
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
G V ++ +L P+ T+ ++I+G+C E + A + L + GCEP+V
Sbjct: 239 MLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDV 298
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQ 170
+YN L+ L G L +M S + V +G +++A L
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 358
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
MK++ + PD +Y +I FC + A L M+ G P++V +N ++ LCKNGK
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
D+A + + ++G PN+ YNT+ +G RA + + M S G +Y+
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNS 478
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
+I+ C+ ++ A L +M S P VV YN + + + H++E A + + M +G
Sbjct: 479 MISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+ TY I+G+ Y EA+EL L
Sbjct: 539 CRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 159 bits (403), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 164/350 (46%), Gaps = 13/350 (3%)
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ G +L ++R + P+ + T LIKG I +A + L FG +P+V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQ 170
F YN LING + A + + M S + G G +D A ++ Q
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ +N P V+TYT +I +EA L+ EM+ +G++P++ T+N I+ +CK G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+D A ++ + G P+ YN L+ G+ ++L M S C V +YSI
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
LI C++ +IE A++L M KG+ PD Y+ L +++ A + + M DG
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
D Y T + LCKN +A+E+F L + C + +YN + L
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 135/271 (49%), Gaps = 13/271 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +++IL L ++ + ++L K + GL PD Y+Y+ LI FC+ GR+
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L ++ P+ V + +++ LC + +A +F KL GC PN +YNT+ + L+
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
+G I AL++ EM S + EG VD+A EL + M+ +P VVT
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVT 510
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y V+ GFC A+ +A +L M+ G +PN T+ V+++ + G EA L + ++
Sbjct: 511 YNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 273
+I + + + L F L + R+ + F
Sbjct: 571 RIDA-ISEYSFKRLHRTFPLLNVLQRSSQTF 600
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 211 bits (536), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 207/400 (51%), Gaps = 28/400 (7%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFG--CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+F ML + SP V ++NIL C A N D L+LF ++ + G P++ TYN LI+
Sbjct: 192 VFKEMLESQVSPN-VFTYNILIRGFCFAGN--IDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+CK+ ++ GF +L + PN +++ +I GLC E R+ E + + T++ G
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDV 180
+ TYNTLI G + G+ AL + EM + P V
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLR-----------------------HGLTPSV 345
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
+TYTS+I C A + N A L +M +G+ PN T+ ++D + G M+EA R+L
Sbjct: 346 ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLRE 405
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M G P+ YN L++G C+TG++ A + M+ G + V SYS +++G+C++ +
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
++ AL + EM+ KGIKPD + Y++L E + + A L++EM R G+ D +TY
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I+ C + +A++L + D+ Y+ LI+GL
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565
Score = 205 bits (522), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 211/426 (49%), Gaps = 28/426 (6%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
+FD M + P V ++N L K + D L + + GL P+L +YN++IN
Sbjct: 225 LTLFDKM-ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
C+ GR+ VL + R ++ + VT+ +LIKG C E +A + ++ G P
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELF 168
+V TY +LI+ + + G+ A+ ++M F +G++++A +
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+M D +P VVTY ++I G C +A +L +M ++G+ P+VV+++ ++ C++
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
+DEA R+ M++ G++P+ Y++L+ GFC R A +L+ M +G F+Y
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ LIN YC ++E AL L+ EM+ KG+ PDVV Y+ L L + + A +L ++
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583
Query: 349 DGVAADTWTYRTFID---------------GLCKNSYIVEAVELFRTLRILKCELDIRAY 393
+ TY T I+ G C + EA ++F ++ + D AY
Sbjct: 584 EESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAY 643
Query: 394 NCLIDG 399
N +I G
Sbjct: 644 NIMIHG 649
Score = 199 bits (506), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 193/386 (50%), Gaps = 24/386 (6%)
Query: 15 PPVCSFN-ILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P V S+N +L + ++ ++FK + + + P+++TYNILI FC G +
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+ ++ PN VT+ +LI G C +I + L + + G EPN+ +YN +INGL
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYA 193
R EG + + + +M + D VTY ++I+G+C
Sbjct: 287 R-----------------------EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKE 323
Query: 194 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
++++A + EM+ G+ P+V+T+ ++ +CK G M+ A LD M G+ PN Y
Sbjct: 324 GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
TL+DGF G +N A + M G + +V +Y+ LING+C ++E A+++ +M
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE 443
Query: 314 KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVE 373
KG+ PDVV Y+T+ + V+ A ++ EM G+ DT TY + I G C+ E
Sbjct: 444 KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503
Query: 374 AVELFRTLRILKCELDIRAYNCLIDG 399
A +L+ + + D Y LI+
Sbjct: 504 ACDLYEEMLRVGLPPDEFTYTALINA 529
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 187/422 (44%), Gaps = 64/422 (15%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S+N++ L + V + +N G D TYN LI +CK G V+
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+LR TP+ +T+TSLI +C + A ++RV G PN TY TL++G +
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G+ A + EM NG V G ++ A + MK++ ++PDVV
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHC-VTGKMEDAIAVLEDMKEKGLSPDVV 451
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
+Y++V+ GFC + D +EA + EM+++G++P+ +T++ ++ C+ + EA L + M
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY------ 295
+++G+ P+ F Y L++ +C+ G + +A +L M G V +YS+LING
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 571
Query: 296 ----------------------------CKNKEIEGALSL----------------YGEM 311
C N E + +SL + M
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM 631
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
L K KPD YN + + +A+ L+ EM + G T T + L K +
Sbjct: 632 LGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKV 691
Query: 372 VE 373
E
Sbjct: 692 NE 693
Score = 158 bits (399), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 156/319 (48%), Gaps = 25/319 (7%)
Query: 82 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV- 140
C++ ++V F ++K S I +A ++ + G P V +YN +++ R+ I
Sbjct: 130 CYSTSSV-FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISF 188
Query: 141 ALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
A N+F+EM + ++P+V TY +IRGFC+A + + A
Sbjct: 189 AENVFKEML-----------------------ESQVSPNVFTYNILIRGFCFAGNIDVAL 225
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
L +M +G PNVVT+N ++D CK K+D+ +LL M G+ PN YN +++G
Sbjct: 226 TLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGL 285
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
C GR+ + M G + +Y+ LI GYCK AL ++ EML G+ P V
Sbjct: 286 CREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSV 345
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
+ Y +L + + + RA + D+M+ G+ + TY T +DG + Y+ EA + R
Sbjct: 346 ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLRE 405
Query: 381 LRILKCELDIRAYNCLIDG 399
+ + YN LI+G
Sbjct: 406 MNDNGFSPSVVTYNALING 424
Score = 101 bits (252), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 135/333 (40%), Gaps = 29/333 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++N L + +++ + + GL PD+ +Y+ +++ FC+ V V
Sbjct: 413 PSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRV 472
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ P+ +T++SLI+G C + R EA L+ ++ G P+ FTY LIN
Sbjct: 473 KREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCM 532
Query: 135 TGHTIVALNLFEEMASG-------------NGEFGVEGFVDKAKELFLQMKDENINPDVV 181
G AL L EM NG + +AK L L++ E P V
Sbjct: 533 EGDLEKALQLHNEMVEKGVLPDVVTYSVLING-LNKQSRTREAKRLLLKLFYEESVPSDV 591
Query: 182 TY---------------TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
TY S+I+GFC EA + M+ + +P+ +N+++ C
Sbjct: 592 TYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHC 651
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
+ G + +A L M++ G + L+ G+VN + V +
Sbjct: 652 RAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAE 711
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
+L+ + ++ L + EM G P+
Sbjct: 712 QAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 1/150 (0%)
Query: 252 VYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE-IEGALSLYGE 310
V++ ++ + +++A + ++ G V SY+ +++ ++K I A +++ E
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKE 195
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
ML + P+V YN L ++ A LFD+M+ G + TY T IDG CK
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I + +L R++ + E ++ +YN +I+GL
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGL 285
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 22/231 (9%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
PP ++ L + L L + G+ PD+ TY++LIN K R
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKR 576
Query: 74 VLGRILRSCFTPNAVTF---------------TSLIKGLCAESRIMEAAALFTKLRVFGC 118
+L ++ P+ VT+ SLIKG C + + EA +F +
Sbjct: 577 LLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNH 636
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINP 178
+P+ YN +I+G R G A L++EM + K L + K +N
Sbjct: 637 KPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNS 696
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+V V+R C ++ +AK +L+E+ + +VV ++ E+ K+G
Sbjct: 697 VIV---HVLRS-CELSEAEQAK-VLVEINHREGNMDVVL--DVLAEMAKDG 740
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 206 bits (523), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 192/386 (49%), Gaps = 23/386 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S N L AK D V FK + G P ++TYNI+I+C CK G V +
Sbjct: 225 PKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGL 284
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ P+ VT+ S+I G R+ + F +++ CEP+V TYN LIN +
Sbjct: 285 FEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCK 344
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G + L + EM GNG + P+VV+Y++++ FC
Sbjct: 345 FGKLPIGLEFYREM-KGNG----------------------LKPNVVSYSTLVDAFCKEG 381
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+A ++M G+ PN T+ ++D CK G + +A RL + M+Q+GV N Y
Sbjct: 382 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYT 441
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L+DG C R+ A+ELF M++ G + SY+ LI+G+ K K ++ AL L E+ +
Sbjct: 442 ALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 501
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
GIKPD+++Y T L + ++E A + +EM+ G+ A++ Y T +D K+ E
Sbjct: 502 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEG 561
Query: 375 VELFRTLRILKCELDIRAYNCLIDGL 400
+ L ++ L E+ + + LIDGL
Sbjct: 562 LHLLDEMKELDIEVTVVTFCVLIDGL 587
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 204/406 (50%), Gaps = 13/406 (3%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ R P ++N + K D + F+ + PD+ TYN LINCFCK G+
Sbjct: 288 MKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 347
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ G + + PN V++++L+ C E + +A + +R G PN +TY +
Sbjct: 348 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 407
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGV-------EGFVD-----KAKELFLQMKDEN 175
LI+ + G+ A L EM E+ V +G D +A+ELF +M
Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 467
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
+ P++ +Y ++I GF A + + A LL E+ +G++P+++ + + LC K++ A
Sbjct: 468 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAK 527
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+++ M + G++ N+ +Y TLMD + +G L M+ + TV ++ +LI+G
Sbjct: 528 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 587
Query: 296 CKNKEIEGALSLYGEMLSK-GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
CKNK + A+ + + + G++ + I+ + L + +QVE A LF++M + G+ D
Sbjct: 588 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 647
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
Y + +DG K ++EA+ L + + +LD+ AY L+ GL
Sbjct: 648 RTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGL 693
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 183/376 (48%), Gaps = 13/376 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S++ L K + + + GL P+ YTY LI+ CK+G +S F +
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+L+ N VT+T+LI GLC R+ EA LF K+ G PN+ +YN LI+G +
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 135 TGHTIVALNLFEEMAS----------GNGEFGVEGF--VDKAKELFLQMKDENINPDVVT 182
+ AL L E+ G +G+ ++ AK + +MK+ I + +
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 544
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YT+++ + + + E LL EM + ++ VVTF V++D LCKN + +A + +
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 604
Query: 243 -QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
G++ NA ++ ++DG C +V A LF M G +Y+ L++G K +
Sbjct: 605 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
AL+L +M G+K D++ Y +L L +Q+++A +EM +G+ D +
Sbjct: 665 LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISV 724
Query: 362 IDGLCKNSYIVEAVEL 377
+ + I EAVEL
Sbjct: 725 LKKHYELGCIDEAVEL 740
Score = 131 bits (330), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 128/242 (52%)
Query: 159 GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 218
G +++A + F +MK + P + ++ F ++ K +M+ G +P V T+
Sbjct: 206 GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY 265
Query: 219 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 278
N+++D +CK G ++ A L + M G+ P+ YN+++DGF GR++ F M+
Sbjct: 266 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 325
Query: 279 MGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVER 338
M C V +Y+ LIN +CK ++ L Y EM G+KP+VV Y+TL + +++
Sbjct: 326 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 385
Query: 339 AFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
A K + +M+R G+ + +TY + ID CK + +A L + + E ++ Y LID
Sbjct: 386 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 445
Query: 399 GL 400
GL
Sbjct: 446 GL 447
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 89/187 (47%)
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
P F+ + L G ++EA + M + V P N L+ F G+ + K
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
F M G TVF+Y+I+I+ CK ++E A L+ EM +G+ PD V YN++ +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
+ +++ F+EM+ D TY I+ CK + +E +R ++ + ++ +
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 393 YNCLIDG 399
Y+ L+D
Sbjct: 370 YSTLVDA 376
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 111/278 (39%), Gaps = 50/278 (17%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + S+N L K K+ D L L L G+ PDL Y I C + ++ VV
Sbjct: 470 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 529
Query: 75 LGRILRSCFTPNA-----------------------------------VTFTSLIKGLCA 99
+ + N+ VTF LI GLC
Sbjct: 530 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 589
Query: 100 ESRIMEAAALFTKLR-VFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASG------- 151
+ +A F ++ FG + N + +I+GL + A LFE+M
Sbjct: 590 NKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRT 649
Query: 152 ------NGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
+G F +G V +A L +M + + D++ YTS++ G + N +A+ L E
Sbjct: 650 AYTSLMDGNFK-QGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEE 708
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
M+ +G+ P+ V ++ + + G +DEA L +++
Sbjct: 709 MIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMK 746
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 201 bits (512), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 131/405 (32%), Positives = 202/405 (49%), Gaps = 11/405 (2%)
Query: 6 YMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM 65
Y + R PP + +F ++ D+ LSL + + G P+ Y LI+ K
Sbjct: 206 YDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKC 265
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
RV+ +L + P+A TF +I GLC RI EAA + ++ + G P+ TY
Sbjct: 266 NRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITY 325
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGN--------GEFGVEGFVDKAKELFLQM-KDENI 176
L+NGL + G A +LF + F G +D AK + M I
Sbjct: 326 GYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI 385
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
PDV TY S+I G+ A +L +M ++G +PNV ++ +++D CK GK+DEA
Sbjct: 386 VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 445
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYC 296
+L+ M G++PN +N L+ FC R+ A E+F M GC V++++ LI+G C
Sbjct: 446 VLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC 505
Query: 297 KNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTW 356
+ EI+ AL L +M+S+G+ + V YNTL +++ A KL +EM G D
Sbjct: 506 EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEI 565
Query: 357 TYRTFIDGLCKNSYIVEAVELF-RTLRILKCELDIRAYNCLIDGL 400
TY + I GLC+ + +A LF + LR +I + N LI+GL
Sbjct: 566 TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNI-SCNILINGL 609
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 195/404 (48%), Gaps = 44/404 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS----- 69
P +FN + L K + + R+ G PD TY L+N CK+GRV
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344
Query: 70 ----------------HGFVVLGR------ILRSCFT-----PNAVTFTSLIKGLCAESR 102
HGFV GR +L T P+ T+ SLI G E
Sbjct: 345 FYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 404
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGF-- 160
+ A + +R GC+PNV++Y L++G + G A N+ EM++ + GF
Sbjct: 405 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNC 464
Query: 161 ----------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQG 210
+ +A E+F +M + PDV T+ S+I G C ++ A LL +M+ +G
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 211 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 270
V N VT+N +++ + G++ EA +L++ M+ G + YN+L+ G C G V++A+
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584
Query: 271 ELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
LF M G + S +ILING C++ +E A+ EM+ +G PD+V +N+L L
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
++E +F ++Q +G+ DT T+ T + LCK ++ +A
Sbjct: 645 CRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Score = 180 bits (457), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 198/407 (48%), Gaps = 17/407 (4%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M N+ P S+N++ L + ++F + S + P L+T+ +++ FC +
Sbjct: 172 MRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVN 231
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+ +L + + PN+V + +LI L +R+ EA L ++ + GC P+ T+N
Sbjct: 232 EIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFN 291
Query: 127 TLINGLYRTGHTIVALNLFEEM-----ASGNGEFGVE-------GFVDKAKELFLQMKDE 174
+I GL + A + M A + +G G VD AK+LF ++
Sbjct: 292 DVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP-- 349
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDE 233
P++V + ++I GF ++AK +L +M+ G+ P+V T+N ++ K G +
Sbjct: 350 --KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGL 407
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
A +L M G +PN + Y L+DGFC G+++ A + M + G ++ LI+
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
+CK I A+ ++ EM KG KPDV +N+L L E+ +++ A L +M +GV A
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+T TY T I+ + I EA +L + LD YN LI GL
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGL 574
Score = 179 bits (455), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 174/351 (49%), Gaps = 23/351 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P VC++N L K L + + + G P++Y+Y IL++ FCK+G++ + V
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + PN V F LI C E RI EA +F ++ GC+P+V+T+N+LI+GL
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
AL L +M S E + + VTY ++I F
Sbjct: 507 VDEIKHALWLLRDMIS-----------------------EGVVANTVTYNTLINAFLRRG 543
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ EA+ L+ EM+ QG + +T+N ++ LC+ G++D+A L + M++ G P+ N
Sbjct: 544 EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCN 603
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
L++G C +G V A E M G T + +++ LING C+ IE L+++ ++ ++
Sbjct: 604 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 663
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
GI PD V +NTL L + V A L DE DG + T+ + +
Sbjct: 664 GIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Score = 98.6 bits (244), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 117/279 (41%), Gaps = 33/279 (11%)
Query: 154 EFGVEGFVDKAKELFLQMKD-ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
++ GF + L L+M++ + P +Y V+ N A + +M+ + +
Sbjct: 155 DYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIP 214
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
P + TF V+M C ++D A LL M + G PN+ +Y TL+ RVN A +L
Sbjct: 215 PTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQL 274
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
M MGC +++ +I G CK I A + ML +G PD + Y L L +
Sbjct: 275 LEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCK 334
Query: 333 IHQVERAFKLF--------------------------------DEMQRDGVAADTWTYRT 360
I +V+ A LF D + G+ D TY +
Sbjct: 335 IGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNS 394
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I G K + A+E+ +R C+ ++ +Y L+DG
Sbjct: 395 LIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDG 433
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 110/248 (44%), Gaps = 5/248 (2%)
Query: 153 GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD-QGV 211
G+ G G L +QMKDE I + S++R + A + L++EM +
Sbjct: 119 GKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSC 178
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
+P ++NV+++ L A+ + M+ + P F + +M FC ++ A
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 272 LFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLF 331
L M GC Y LI+ K + AL L EM G PD +N + + L
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIR 391
+ ++ A K+ + M G A D TY ++GLCK + A +LF RI K E+ I
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF--YRIPKPEIVI- 355
Query: 392 AYNCLIDG 399
+N LI G
Sbjct: 356 -FNTLIHG 362
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 12/231 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FN L L + L L + + S G+ + TYN LIN F + G + +
Sbjct: 492 PDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 551
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ ++ + +T+ SLIKGLC + +A +LF K+ G P+ + N LINGL R
Sbjct: 552 VNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCR 611
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
+G A+ +EM + G ++ +F +++ E I PD VT
Sbjct: 612 SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVT 671
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
+ +++ C +A LL E ++ G PN T+++++ + +D
Sbjct: 672 FNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 99/201 (49%), Gaps = 3/201 (1%)
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI-GVRPNAFVYNTLMDGF 260
LLI+M D+G+ F IM + K G + +RL+ M + P YN +++
Sbjct: 133 LLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLE-I 191
Query: 261 CLTGRVNR-AKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPD 319
++G ++ A +F M S T+F++ +++ +C EI+ ALSL +M G P+
Sbjct: 192 LVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPN 251
Query: 320 VVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFR 379
VIY TL L + ++V A +L +EM G D T+ I GLCK I EA ++
Sbjct: 252 SVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVN 311
Query: 380 TLRILKCELDIRAYNCLIDGL 400
+ I D Y L++GL
Sbjct: 312 RMLIRGFAPDDITYGYLMNGL 332
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 66/135 (48%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
SP ++N L L + D SLF+++ G P + NILIN C+ G V
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAV 619
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
++ TP+ VTF SLI GLC RI + +F KL+ G P+ T+NTL++ L
Sbjct: 620 EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWL 679
Query: 133 YRTGHTIVALNLFEE 147
+ G A L +E
Sbjct: 680 CKGGFVYDACLLLDE 694
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F+ ML +P + S NIL L ++ + + K + G PD+ T+N LIN
Sbjct: 586 LFEKMLRDGHAPSNI-SCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C+ GR+ G + ++ P+ VTF +L+ LC + +A L + G PN
Sbjct: 645 CRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNH 704
Query: 123 FTYNTLINGL 132
T++ L+ +
Sbjct: 705 RTWSILLQSI 714
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 52/100 (52%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F + +R S P + +FN L L + + L++F++L + G+ PD T+N L++ C
Sbjct: 621 FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLC 680
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRI 103
K G V ++L + F PN T++ L++ + + +
Sbjct: 681 KGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETL 720
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 201 bits (510), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 201/396 (50%), Gaps = 25/396 (6%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F+ M++ P C FN L + + ++ S F N + + D+Y++ ILI C
Sbjct: 117 FNEMVDNGFVPGSNC-FNYLLTFVVGSSSFNQWWSFFNE-NKSKVVLDVYSFGILIKGCC 174
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
+ G + F +L + F+PN V +T+LI G C + I +A LF ++ G N
Sbjct: 175 EAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANER 234
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
TY LINGL++ G +GF E++ +M+++ + P++ TY
Sbjct: 235 TYTVLINGLFKNG------------------VKKQGF-----EMYEKMQEDGVFPNLYTY 271
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
V+ C +A + EM ++GV N+VT+N ++ LC+ K++EA++++D M
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS 331
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G+ PN YNTL+DGFC G++ +A L ++S G + ++ +Y+IL++G+C+ + G
Sbjct: 332 DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSG 391
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A + EM +GIKP V Y L +E+A +L M+ G+ D TY I
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIH 451
Query: 364 GLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
G C + EA LF+++ CE + YN +I G
Sbjct: 452 GFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILG 487
Score = 182 bits (462), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 173/337 (51%), Gaps = 23/337 (6%)
Query: 19 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 78
++ +L L KN +++++ G+FP+LYTYN ++N CK GR F V +
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 79 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+ N VT+ +LI GLC E ++ EA + +++ G PN+ TYNTLI+G
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGF------ 348
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
G G+ G KA L +K ++P +VTY ++ GFC D +
Sbjct: 349 -----------CGVGKLG------KALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSG 391
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A ++ EM ++G++P+ VT+ +++D ++ M++A +L M ++G+ P+ Y+ L+
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIH 451
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
GFC+ G++N A LF SM C Y+ +I GYCK AL L EM K + P
Sbjct: 452 GFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAP 511
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADT 355
+V Y + VL + + + A +L ++M G+ T
Sbjct: 512 NVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 104/218 (47%), Gaps = 1/218 (0%)
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I + + N + EM+D G P FN ++ + + ++ +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN- 155
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ V + + + L+ G C G + ++ +L + + G + V Y+ LI+G CK EIE
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A L+ EM G+ + Y L LF+ ++ F+++++MQ DGV + +TY +
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ LCK+ +A ++F +R +I YN LI GL
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
R P ++ IL A++ + + + L + GL PD++TY++LI+ FC G+++
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ ++ PN V + ++I G C E A L ++ PNV +Y +I
Sbjct: 462 ASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIE 521
Query: 131 GLYRTGHTIVALNLFEEM 148
L + + A L E+M
Sbjct: 522 VLCKERKSKEAERLVEKM 539
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 45/108 (41%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++++L + LFK + P+ YN +I +CK G +
Sbjct: 441 PDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKL 500
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
L + PN ++ +I+ LC E + EA L K+ G +P+
Sbjct: 501 LKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 200 bits (509), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/360 (30%), Positives = 190/360 (52%), Gaps = 23/360 (6%)
Query: 4 FDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
F Y ++ R P V ++ + + LF + GL PD T+ LIN +C
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K G + F V ++++ +PN VT+T+LI GLC E + A L ++ G +PN+F
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
TYN+++NGL ++G+ A+ L GEF G +N D VTY
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLV-------GEFEAAG----------------LNADTVTY 529
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
T+++ +C + + ++A+ +L EM+ +G+QP +VTFNV+M+ C +G +++ +LL+ M+
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G+ PNA +N+L+ +C+ + A ++ M S G +Y L+ G+CK + ++
Sbjct: 590 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 649
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
A L+ EM KG V Y+ L + + A ++FD+M+R+G+AAD + F D
Sbjct: 650 AWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
Score = 199 bits (507), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 198/406 (48%), Gaps = 12/406 (2%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++ ++ P V S++ + + D V L + + GL P+ Y Y +I C++
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+++ ++R P+ V +T+LI G C I A+ F ++ P+V TY
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDE 174
+I+G + G + A LF EM E + G + A + M
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
+P+VVTYT++I G C D + A LL EM G+QPN+ T+N I++ LCK+G ++EA
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+L+ G+ + Y TLMD +C +G +++A+E+ M G T+ ++++L+NG
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
+C + +E L ML+KGI P+ +N+L + ++ A ++ +M GV D
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
TY + G CK + EA LF+ ++ + + Y+ LI G
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 676
Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 171/355 (48%), Gaps = 12/355 (3%)
Query: 40 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
F + G+ PD Y LI+ FCK G + + TP+ +T+T++I G C
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV-- 157
++EA LF ++ G EP+ T+ LING + GH A + M V
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 158 ----------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
EG +D A EL +M + P++ TY S++ G C + + EA L+ E
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
G+ + VT+ +MD CK+G+MD+A +L M+ G++P +N LM+GFCL G +
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
++L M + G +++ L+ YC ++ A ++Y +M S+G+ PD Y L
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
+ ++ A+ LF EM+ G + TY I G K +EA E+F +R
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 186/375 (49%), Gaps = 12/375 (3%)
Query: 35 TVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 94
T + +F+ G+ ++ +YNI+I+ C++GR+ +L + +TP+ +++++++
Sbjct: 229 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 95 KGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN-- 152
G C + + L ++ G +PN + Y ++I L R A F EM
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 153 ----------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCL 202
F G + A + F +M +I PDV+TYT++I GFC D EA L
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 203 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 262
EM +G++P+ VTF +++ CK G M +A R+ + MIQ G PN Y TL+DG C
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 263 TGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
G ++ A EL M +G +F+Y+ ++NG CK+ IE A+ L GE + G+ D V
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
Y TL + ++++A ++ EM G+ T+ ++G C + + + +L +
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 383 ILKCELDIRAYNCLI 397
+ +N L+
Sbjct: 589 AKGIAPNATTFNSLV 603
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 161/311 (51%), Gaps = 13/311 (4%)
Query: 103 IMEAAALFTKLRVFGCEPNVFTYNTLINGL----YRTGHTIVALNLFEEM------ASGN 152
+ EA +F K+ +G +V + N + L Y+T I+ F E+ AS N
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 153 G--EFGVE-GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
F + G + +A L L M+ + PDV++Y++V+ G+C + ++ L+ M +
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 210 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
G++PN + I+ LC+ K+ EA MI+ G+ P+ VY TL+DGFC G + A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
+ F M S T V +Y+ +I+G+C+ ++ A L+ EM KG++PD V + L
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
+ ++ AF++ + M + G + + TY T IDGLCK + A EL + + + +
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 390 IRAYNCLIDGL 400
I YN +++GL
Sbjct: 491 IFTYNSIVNGL 501
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 107/241 (44%), Gaps = 12/241 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + ++N + L K+ + + + L + GL D TY L++ +CK G + +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L P VTF L+ G C + + L + G PN T+N+L+
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 135 TGHTIVALNLFEEMAS-GNGEFG------VEGF-----VDKAKELFLQMKDENINPDVVT 182
+ A ++++M S G G G V+G + +A LF +MK + + V T
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y+ +I+GF + EA+ + +M +G+ + F+ D K + D +D +I
Sbjct: 669 YSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEII 728
Query: 243 Q 243
+
Sbjct: 729 E 729
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 194 bits (493), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 207/403 (51%), Gaps = 13/403 (3%)
Query: 10 MRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS 69
M+ SP +IL G L + + +D+V ++ + S GL PD++ Y +L C K G S
Sbjct: 158 MKCSPDSKACLSILNG-LVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYS 216
Query: 70 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLI 129
+L + PN +T I LC ++++ EA +F ++ G PN++TY+ +I
Sbjct: 217 KKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMI 276
Query: 130 NGLYRTGHTIVALNLFEEMASGN-----GEFG--VEGFVDK-----AKELFLQMKDENIN 177
+G +TG+ A L++E+ FG V+GF A+ LF+ M ++
Sbjct: 277 DGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVD 336
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P++ Y +I G C + + EA LL EM + P+V T+ ++++ LC ++ EA+RL
Sbjct: 337 PNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRL 396
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
M + P++ YN+L+ G+C + +A +L M + G + ++S LI+GYC
Sbjct: 397 FQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCN 456
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWT 357
++I+ A+ LY EM KGI PDVV Y L F+ ++ A +L+ +M G+ + T
Sbjct: 457 VRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHT 516
Query: 358 YRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +DG K + A++ ++ + + + CLI+GL
Sbjct: 517 FACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGL 559
Score = 165 bits (418), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 185/416 (44%), Gaps = 47/416 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + I L ++ + +F+ + G+ P+LYTY+ +I+ +CK G V + +
Sbjct: 232 PNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGL 291
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
IL + PN V F +L+ G C ++ A +LF + FG +PN++ YN LI+G +
Sbjct: 292 YKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCK 351
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENI------ 176
+G+ + A+ L EM S N +E V +A LF +MK+E I
Sbjct: 352 SGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSAT 411
Query: 177 -----------------------------NPDVVTYTSVIRGFCYANDWNEAKCLLIEMM 207
P+++T++++I G+C D A L EM
Sbjct: 412 YNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMT 471
Query: 208 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
+G+ P+VVT+ ++D K M EA RL M++ G+ PN + L+DGF GR++
Sbjct: 472 IKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLS 531
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A + + ++ LI G C+N I A + +M S GI PD+ Y ++
Sbjct: 532 VAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSML 591
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
+ ++ L +M + G+ + + N Y+ A L + R+
Sbjct: 592 KGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTNSSRL 647
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 194 bits (492), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 200/410 (48%), Gaps = 12/410 (2%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+F M+ P V + + L L K +H+ + LF + S G+ PD+Y Y +I
Sbjct: 178 VFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSL 237
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
C++ +S ++ + + N V + LI GLC + ++ EA + L +P+V
Sbjct: 238 CELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDV 297
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEM-------ASGNGEFGVEGF-----VDKAKELFLQ 170
TY TL+ GL + + L + +EM + VEG +++A L +
Sbjct: 298 VTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKR 357
Query: 171 MKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 230
+ D ++P++ Y ++I C ++EA+ L M G++PN VT+++++D C+ GK
Sbjct: 358 VVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGK 417
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+D A L M+ G++ + + YN+L++G C G ++ A+ M + TV +Y+
Sbjct: 418 LDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTS 477
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
L+ GYC +I AL LY EM KGI P + + TL LF + A KLF+EM
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN 537
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
V + TY I+G C+ + +A E + + D +Y LI GL
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 191/396 (48%), Gaps = 24/396 (6%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+FD M + P V +++IL + DT LS + TGL +Y YN LIN
Sbjct: 389 LFDRMGKIGLRPNDV-TYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGH 447
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNV 122
CK G +S + ++ P VT+TSL+ G C++ +I +A L+ ++ G P++
Sbjct: 448 CKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSI 507
Query: 123 FTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVT 182
+T+ TL++GL+R G A+ LF EMA + N+ P+ VT
Sbjct: 508 YTFTTLLSGLFRAGLIRDAVKLFNEMA-----------------------EWNVKPNRVT 544
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I G+C D ++A L EM ++G+ P+ ++ ++ LC G+ EA +D +
Sbjct: 545 YNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH 604
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ N Y L+ GFC G++ A + M G + Y +LI+G K+K+ +
Sbjct: 605 KGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRK 664
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
L EM +G+KPD VIY ++ + + AF ++D M +G + TY I
Sbjct: 665 LFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
+GLCK ++ EA L ++ + + Y C +D
Sbjct: 725 NGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD 760
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 191/415 (46%), Gaps = 31/415 (7%)
Query: 16 PVCSFNILFGCLAKNK------------HY-------DTVLSLFKRLNSTGLFPDLYTYN 56
P FN+LF C K K HY D VL + L P++ T +
Sbjct: 137 PSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLS 196
Query: 57 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVF 116
L++ K + ++ P+ +T +I+ LC + A + +
Sbjct: 197 ALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEAT 256
Query: 117 GCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVD--------KAKELF 168
GC+ N+ YN LI+GL + A+ + +++A + + V + + E+
Sbjct: 257 GCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIG 316
Query: 169 LQMKDE----NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 224
L+M DE +P +S++ G EA L+ ++D GV PN+ +N ++D
Sbjct: 317 LEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDS 376
Query: 225 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHT 284
LCK K EA L D M +IG+RPN Y+ L+D FC G+++ A M G +
Sbjct: 377 LCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLS 436
Query: 285 VFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFD 344
V+ Y+ LING+CK +I A EM++K ++P VV Y +L ++ +A +L+
Sbjct: 437 VYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH 496
Query: 345 EMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
EM G+A +T+ T + GL + I +AV+LF + + + YN +I+G
Sbjct: 497 EMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEG 551
Score = 167 bits (423), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 179/399 (44%), Gaps = 20/399 (5%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ +N+L L K + + + K L L PD+ TY L+ CK+ G ++
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMD 321
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+L F+P+ +SL++GL +I EA L ++ FG PN+F YN LI+ L +
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381
Query: 137 HTIVALNLFEEMASGNGEFGVE----------------GFVDKAKELFLQMKDENINPDV 180
A LF+ M G+ G+ G +D A +M D + V
Sbjct: 382 KFHEAELLFDRM----GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSV 437
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
Y S+I G C D + A+ + EM+++ ++P VVT+ +M C GK+++A RL
Sbjct: 438 YPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE 497
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
M G+ P+ + + TL+ G G + A +LF M +Y+++I GYC+ +
Sbjct: 498 MTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGD 557
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
+ A EM KGI PD Y L L Q A D + + + Y
Sbjct: 558 MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ G C+ + EA+ + + + +LD+ Y LIDG
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656
Score = 157 bits (398), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 170/376 (45%), Gaps = 14/376 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +F L L + + LF + + P+ TYN++I +C+ G +S F
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + P+ ++ LI GLC + EA L CE N Y L++G R
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 135 TGHTIVALNLFEEMASGNGE-----FGV---EGFVDKAKELFL----QMKDENINPDVVT 182
G AL++ +EM + +GV K ++LF +M D + PD V
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVI 684
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
YTS+I D+ EA + M+++G PN VT+ +++ LCK G ++EA L M
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM-GCTHTVFSYSILINGYCKNKEI 301
+ PN Y +D G V+ K + + + G +Y++LI G+C+ I
Sbjct: 745 PVSSVPNQVTYGCFLD-ILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRI 803
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A L M+ G+ PD + Y T+ L + V++A +L++ M G+ D Y T
Sbjct: 804 EEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTL 863
Query: 362 IDGLCKNSYIVEAVEL 377
I G C + +A EL
Sbjct: 864 IHGCCVAGEMGKATEL 879
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Query: 288 YSILINGYCKNKEIEGALSLYGEMLSK-GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM 346
+ +LI Y +++ + + ++ M++K + P+V + L L + A +LF++M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 347 QRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
G+ D + Y I LC+ + A E+ + C+++I YN LIDGL
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGL 272
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 191 bits (486), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 182/385 (47%), Gaps = 7/385 (1%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +++ + L + LF+ + GL D+YTY I+++ FCK G +
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ TPN VT+T+LI ++ A LF + GC PN+ TY+ LI+G +
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G A +FE M V+ + F Q D + P+VVTY +++ GFC ++
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMY-------FKQYDDNSERPNVVTYGALLDGFCKSH 653
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
EA+ LL M +G +PN + ++ ++D LCK GK+DEA + M + G + Y+
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L+D + R + A ++ M C V Y+ +I+G CK + + A L M K
Sbjct: 714 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 773
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G +P+VV Y + I ++E +L + M GVA + TYR ID CKN + A
Sbjct: 774 GCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVA 833
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
L ++ Y +I+G
Sbjct: 834 HNLLEEMKQTHWPTHTAGYRKVIEG 858
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 186/419 (44%), Gaps = 36/419 (8%)
Query: 15 PPVCSFNILFGCLAKNKH------YDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV 68
P +NIL G + +K D + + + G+ + + C C G+
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464
Query: 69 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTL 128
F V+ ++ F P+ T++ ++ LC S++ A LF +++ G +V+TY +
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 129 INGLYRTGHTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENI 176
++ + G A F EM V + V A ELF M E
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMM-----------------DQGVQPNVVTFN 219
P++VTY+++I G C A +A C + E M D +PNVVT+
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKA-CQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYG 643
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
++D CK+ +++EA +LLD M G PN VY+ L+DG C G+++ A+E+ M
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH 703
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G T+++YS LI+ Y K K + A + +ML P+VVIY + L ++ + + A
Sbjct: 704 GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEA 763
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
+KL M+ G + TY IDG I +EL + + Y LID
Sbjct: 764 YKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822
Score = 158 bits (399), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 190/437 (43%), Gaps = 63/437 (14%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ L K K LF+ + S G P++ TY+ LI+ CK G+V +
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI 610
Query: 75 LGRILRS----------------CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC 118
R+ S PN VT+ +L+ G C R+ EA L + + GC
Sbjct: 611 FERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 670
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE---FGVEGFVDK---------AKE 166
EPN Y+ LI+GL + G A + EM+ + +D+ A +
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 730
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
+ +M + + P+VV YT +I G C +EA L+ M ++G QPNVVT+ ++D
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMGCTHT- 284
GK++ LL+ M GV PN Y L+D C G ++ A L M ++ THT
Sbjct: 791 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850
Query: 285 -------------------------------VFSYSILINGYCKNKEIEGALSLYGEM-- 311
+ Y +LI+ K + +E AL L E+
Sbjct: 851 GYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 910
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
S + YN+L L ++VE AF+LF EM + GV + ++ + I GL +NS I
Sbjct: 911 FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKI 970
Query: 372 VEAVELFRTLRILKCEL 388
EA+ L + + C L
Sbjct: 971 SEALLLLDFISHMVCPL 987
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 194/455 (42%), Gaps = 72/455 (15%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N L K D+ + + ++ L D +T CK+G+ +
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY--------- 125
+ F P+ V +T LI GLC S EA ++R C PNV TY
Sbjct: 293 ---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349
Query: 126 --------------------------NTLINGLYRTGHTIVALNLFEEMAS--------- 150
N+L++ +G A L ++M
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVV 409
Query: 151 ---------GNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKC 201
G+ + +D A++ + +M + + + +S R C A + +A
Sbjct: 410 YNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFS 469
Query: 202 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 261
++ EM+ QG P+ T++ +++ LC KM+ A L + M + G+ + + Y ++D FC
Sbjct: 470 VIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 529
Query: 262 LTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
G + +A++ F M +GCT V +Y+ LI+ Y K K++ A L+ MLS+G P++V
Sbjct: 530 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIV 589
Query: 322 IYNTLFVVLFEIHQVERAFKLFDEM--QRDGVAADTW--------------TYRTFIDGL 365
Y+ L + QVE+A ++F+ M +D D + TY +DG
Sbjct: 590 TYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGF 649
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
CK+ + EA +L + + CE + Y+ LIDGL
Sbjct: 650 CKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 684
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 159/362 (43%), Gaps = 21/362 (5%)
Query: 56 NILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-----F 110
N+L+ C+ G S LGR+ F P+ T+ LI+ R+ A+ +
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 111 TKLRVFGCEPNVFTYNTLINGLYRTGHTIVALN-------LFEEMASGNGEFGVEGFVDK 163
LR+ G F Y+ G +R T+V + ++ SG E ++
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCE---ASLFEE 320
Query: 164 AKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 223
A + +M+ + P+VVTY++++ G K +L MM +G P+ FN ++
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380
Query: 224 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR------VNRAKELFVSME 277
C +G A +LL M++ G P VYN L+ C ++ A++ + M
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEML 440
Query: 278 SMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVE 337
+ G + S C + E A S+ EM+ +G PD Y+ + L ++E
Sbjct: 441 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500
Query: 338 RAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
AF LF+EM+R G+ AD +TY +D CK I +A + F +R + C ++ Y LI
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560
Query: 398 DG 399
Sbjct: 561 HA 562
Score = 115 bits (287), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 135/314 (42%), Gaps = 16/314 (5%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
++M P ++ L L K D + ++ G LYTY+ LI+ + K+ R
Sbjct: 665 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR 724
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
VL ++L + PN V +T +I GLC + EA L + GC+PNV TY
Sbjct: 725 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 784
Query: 128 LINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDEN 175
+I+G G L L E M S G +D A L +MK +
Sbjct: 785 MIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH 844
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
Y VI GF ++ E+ LL E+ P + + +++D L K +++ A
Sbjct: 845 WPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMAL 902
Query: 236 RLLDLMIQIGVR--PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
RLL+ + + YN+L++ CL +V A +LF M G + S+ LI
Sbjct: 903 RLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIK 962
Query: 294 GYCKNKEIEGALSL 307
G +N +I AL L
Sbjct: 963 GLFRNSKISEALLL 976
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 29/241 (12%)
Query: 7 MLNMRPSPPPVCSFNIL---FGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 63
M+ + P V ++ + FG + K +T L L +R+ S G+ P+ TY +LI+ C
Sbjct: 769 MMEEKGCQPNVVTYTAMIDGFGMIGK---IETCLELLERMGSKGVAPNYVTYRVLIDHCC 825
Query: 64 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVF 123
K G + +L + ++ + + + +I+G E +E+ L ++ P +
Sbjct: 826 KNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLS 883
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
Y LI+ L + +AL L EE+A+ + VD + TY
Sbjct: 884 VYRLLIDNLIKAQRLEMALRLLEEVATFSAT-----LVDYSS----------------TY 922
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
S+I C AN A L EM +GV P + +F ++ L +N K+ EA LLD +
Sbjct: 923 NSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISH 982
Query: 244 I 244
+
Sbjct: 983 M 983
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 62/160 (38%), Gaps = 7/160 (4%)
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFS--YSILINGYCKNKE 300
QIG + A VYN L+D +E + VF ++L+ +C+N
Sbjct: 158 QIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDD--KEVFGEFLNVLVRKHCRNGS 215
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
AL G + +P YN L + +++ A + EM + D +T R
Sbjct: 216 FSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRC 275
Query: 361 FIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
F LCK EA+ L T + D Y LI GL
Sbjct: 276 FAYSLCKVGKWREALTLVETENFVP---DTVFYTKLISGL 312
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 191 bits (485), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 194/395 (49%), Gaps = 15/395 (3%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
+ +FN L L K L ++ G+ P+L+TYN+ I C+ G + ++G
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
++ P+ +T+ +LI GLC S+ EA K+ G EP+ +TYNTLI G + G
Sbjct: 276 CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 137 HTIVALNLFEEMASGNG----EFGV---------EGFVDKAKELFLQMKDENINPDVVTY 183
+A + + A NG +F EG ++A LF + + I P+V+ Y
Sbjct: 336 MVQLAERIVGD-AVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 243
++I+G EA L EM ++G+ P V TFN++++ LCK G + +A L+ +MI
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
Query: 244 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEG 303
G P+ F +N L+ G+ ++ A E+ M G V++Y+ L+NG CK + E
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFED 514
Query: 304 ALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFID 363
+ Y M+ KG P++ +N L L +++ A L +EM+ V D T+ T ID
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574
Query: 364 GLCKNSYIVEAVELFRTL-RILKCELDIRAYNCLI 397
G CKN + A LFR + K YN +I
Sbjct: 575 GFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIII 609
Score = 186 bits (472), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 194/394 (49%), Gaps = 25/394 (6%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
++ P P + N+++G +K + + L K +N GL PD YTYN LI +CK G
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNE-GLEPDSYTYNTLIAGYCKGG 335
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
V ++G + + F P+ T+ SLI GLC E A ALF + G +PNV YN
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 395
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
TLI GL G + A L EM+ ++ + P+V T+ +
Sbjct: 396 TLIKGLSNQGMILEAAQLANEMS-----------------------EKGLIPEVQTFNIL 432
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
+ G C ++A L+ M+ +G P++ TFN+++ KM+ A +LD+M+ GV
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGV 492
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
P+ + YN+L++G C T + E + +M GC +F+++IL+ C+ ++++ AL
Sbjct: 493 DPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALG 552
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRD-GVAADTWTYRTFIDGL 365
L EM +K + PD V + TL + ++ A+ LF +M+ V++ T TY I
Sbjct: 553 LLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAF 612
Query: 366 CKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ + A +LF+ + D Y ++DG
Sbjct: 613 TEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDG 646
Score = 174 bits (442), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 185/376 (49%), Gaps = 12/376 (3%)
Query: 36 VLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 95
+++F+R++ P +++YN +++ G V R+ TP+ +FT +K
Sbjct: 95 AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154
Query: 96 GLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEM-ASG--- 151
C SR A L + GCE NV Y T++ G Y LF +M ASG
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214
Query: 152 -----NGEFGV---EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
N V +G V + ++L ++ + P++ TY I+G C + + A ++
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMV 274
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
+++QG +P+V+T+N ++ LCKN K EA L M+ G+ P+++ YNTL+ G+C
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG 334
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
G V A+ + G F+Y LI+G C E AL+L+ E L KGIKP+V++Y
Sbjct: 335 GMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
NTL L + A +L +EM G+ + T+ ++GLCK + +A L + +
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
Query: 384 LKCELDIRAYNCLIDG 399
DI +N LI G
Sbjct: 455 KGYFPDIFTFNILIHG 470
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 196/456 (42%), Gaps = 93/456 (20%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRV------ 68
P V S+N + L + ++D ++ R+ G+ PD+Y++ I + FCK R
Sbjct: 109 PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRL 168
Query: 69 -----------------------------SHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 99
+ G+ + G++L S + TF L++ LC
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCK 228
Query: 100 ESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEG 159
+ + E L K+ G PN+FTYN I GL + G
Sbjct: 229 KGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE---------------------- 266
Query: 160 FVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 219
+D A + + ++ PDV+TY ++I G C + + EA+ L +M+++G++P+ T+N
Sbjct: 267 -LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS---- 275
++ CK G + A R++ + G P+ F Y +L+DG C G NRA LF
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385
Query: 276 -------------------------------MESMGCTHTVFSYSILINGYCKNKEIEGA 304
M G V +++IL+NG CK + A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 305 LSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDG 364
L M+SKG PD+ +N L ++E A ++ D M +GV D +TY + ++G
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Query: 365 LCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
LCK S + +E ++T+ C ++ +N L++ L
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 541
Score = 148 bits (374), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 158/346 (45%), Gaps = 58/346 (16%)
Query: 90 FTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMA 149
+ +K + ++ EA +F ++ + CEP VF+YN +++ L +
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDS-------------- 124
Query: 150 SGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQ 209
G+ D+A +++++M+D I PDV ++T ++ FC + + A LL M Q
Sbjct: 125 ---------GYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQ 175
Query: 210 GVQPNVV-----------------------------------TFNVIMDELCKNGKMDEA 234
G + NVV TFN ++ LCK G + E
Sbjct: 176 GCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKEC 235
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
+LLD +I+ GV PN F YN + G C G ++ A + + G V +Y+ LI G
Sbjct: 236 EKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYG 295
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
CKN + + A G+M+++G++PD YNTL + V+ A ++ + +G D
Sbjct: 296 LCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPD 355
Query: 355 TWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+TYR+ IDGLC A+ LF + ++ YN LI GL
Sbjct: 356 QFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
Score = 138 bits (348), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 145/308 (47%), Gaps = 24/308 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FNIL L K L K + S G FPD++T+NILI+ + ++ + +
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +L + P+ T+ SL+ GLC S+ + + + GC PN+FT+N L+ L R
Sbjct: 484 LDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
AL L EE MK++++NPD VT+ ++I GFC
Sbjct: 544 YRKLDEALGLLEE-----------------------MKNKSVNPDAVTFGTLIDGFCKNG 580
Query: 195 DWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 253
D + A L +M + V + T+N+I+ + + A +L M+ + P+ + Y
Sbjct: 581 DLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTY 640
Query: 254 NTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLS 313
++DGFC TG VN + + M G ++ + +IN C + A + M+
Sbjct: 641 RLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQ 700
Query: 314 KGIKPDVV 321
KG+ P+ V
Sbjct: 701 KGLVPEAV 708
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 121/250 (48%), Gaps = 5/250 (2%)
Query: 154 EFGVEGFVDKAKELFLQMKDENINPDVV--TYTSVIRGFCYANDWNEAKCLLIEMMDQGV 211
+ G G + +E+ + M+ EN+ ++ Y ++ + EA + M
Sbjct: 49 KLGYYGKFEAMEEVLVDMR-ENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDC 107
Query: 212 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 271
+P V ++N IM L +G D+A ++ M G+ P+ + + M FC T R + A
Sbjct: 108 EPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALR 167
Query: 272 LFVSMESMGCTHTVFSYSILING-YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVL 330
L +M S GC V +Y ++ G Y +N + EG L+G+ML+ G+ + +N L VL
Sbjct: 168 LLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG-YELFGKMLASGVSLCLSTFNKLLRVL 226
Query: 331 FEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
+ V+ KL D++ + GV + +TY FI GLC+ + AV + L + D+
Sbjct: 227 CKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDV 286
Query: 391 RAYNCLIDGL 400
YN LI GL
Sbjct: 287 ITYNNLIYGL 296
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 190 bits (483), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 201/399 (50%), Gaps = 12/399 (3%)
Query: 14 PPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 73
P + ++N + K + + L + S G+ D+ TYN+LI+ C+ R++ G++
Sbjct: 225 APTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL 284
Query: 74 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+L + + PN VT+ +LI G E +++ A+ L ++ FG PN T+N LI+G
Sbjct: 285 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 344
Query: 134 RTGHTIVALNLFEEMAS-----GNGEFGV--EGF-----VDKAKELFLQMKDENINPDVV 181
G+ AL +F M + +GV +G D A+ +++MK + +
Sbjct: 345 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 404
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
TYT +I G C +EA LL EM G+ P++VT++ +++ CK G+ A ++ +
Sbjct: 405 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 464
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
++G+ PN +Y+TL+ C G + A ++ +M G T F++++L+ CK ++
Sbjct: 465 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 524
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
A M S GI P+ V ++ L + +AF +FDEM + G +TY +
Sbjct: 525 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 584
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ GLCK ++ EA + ++L + +D YN L+ +
Sbjct: 585 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 623
Score = 159 bits (403), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 171/376 (45%), Gaps = 32/376 (8%)
Query: 13 SPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 72
S P V ++IL + L +F+ + G P +YT N ++ K G +
Sbjct: 121 SNPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178
Query: 73 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGL 132
L +L+ P+ TF LI LCAE +++ L K+ G P + TYNT+++
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238
Query: 133 YRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCY 192
+ G A+ L + MK + ++ DV TY +I C
Sbjct: 239 CKKGRFKAAIELLD-----------------------HMKSKGVDADVCTYNMLIHDLCR 275
Query: 193 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 252
+N + LL +M + + PN VT+N +++ GK+ AS+LL+ M+ G+ PN
Sbjct: 276 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335
Query: 253 YNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML 312
+N L+DG G A ++F ME+ G T + SY +L++G CKN E + A Y M
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395
Query: 313 SKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIV 372
G+ + Y + L + ++ A L +EM +DG+ D TY I+G CK
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCK----- 450
Query: 373 EAVELFRTLRILKCEL 388
V F+T + + C +
Sbjct: 451 --VGRFKTAKEIVCRI 464
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 168/346 (48%), Gaps = 13/346 (3%)
Query: 66 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTY 125
G+ S F L R C N + LI+ E I ++ +F + ++G P+V+T
Sbjct: 103 GKSSFVFGALMTTYRLC-NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTC 161
Query: 126 NTLINGLYRTGHTIVALNLFEEMASGN-----GEFGV-------EGFVDKAKELFLQMKD 173
N ++ + ++G + + +EM F + EG +K+ L +M+
Sbjct: 162 NAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEK 221
Query: 174 ENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 233
P +VTY +V+ +C + A LL M +GV +V T+N+++ +LC++ ++ +
Sbjct: 222 SGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAK 281
Query: 234 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILIN 293
LL M + + PN YNTL++GF G+V A +L M S G + +++ LI+
Sbjct: 282 GYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALID 341
Query: 294 GYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAA 353
G+ + AL ++ M +KG+ P V Y L L + + + A + M+R+GV
Sbjct: 342 GHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCV 401
Query: 354 DTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
TY IDGLCKN ++ EAV L + + DI Y+ LI+G
Sbjct: 402 GRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 447
Score = 138 bits (348), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 167/379 (44%), Gaps = 19/379 (5%)
Query: 24 FGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCF 83
GCL + + +++ + G D +T+N+L+ CK G+V+ + +
Sbjct: 486 MGCLKE------AIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539
Query: 84 TPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALN 143
PN V+F LI G ++A ++F ++ G P FTY +L+ GL + GH A
Sbjct: 540 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK 599
Query: 144 LFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFC 191
+ + + G + KA LF +M +I PD TYTS+I G C
Sbjct: 600 FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC 659
Query: 192 YANDWNEAKCLLIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
A E +G V PN V + +D + K G+ + M +G P+
Sbjct: 660 RKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDI 719
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
N ++DG+ G++ + +L M + + +Y+IL++GY K K++ + LY
Sbjct: 720 VTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRS 779
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
++ GI PD + ++L + + E + +E K+ GV D +T+ I C N
Sbjct: 780 IILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGE 839
Query: 371 IVEAVELFRTLRILKCELD 389
I A +L + + L LD
Sbjct: 840 INWAFDLVKVMTSLGISLD 858
Score = 125 bits (314), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/449 (22%), Positives = 191/449 (42%), Gaps = 51/449 (11%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +FD M + P ++ L L K H K L++ D YN L+
Sbjct: 563 FSVFDEMTKV-GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 621
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG-CE 119
CK G ++ + G +++ P++ T+TSLI GLC + + + A + G
Sbjct: 622 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL 681
Query: 120 PNVFTYNTLINGLYRTGHTIVALNLFEEM-------------ASGNGEFGVEGFVDKAKE 166
PN Y ++G+++ G + E+M A +G + G ++K +
Sbjct: 682 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG-YSRMGKIEKTND 740
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
L +M ++N P++ TY ++ G+ D + + L ++ G+ P+ +T + ++ +C
Sbjct: 741 LLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGIC 800
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCT---- 282
++ ++ ++L I GV + + +N L+ C G +N A +L M S+G +
Sbjct: 801 ESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKD 860
Query: 283 ----------------------HTVFSYSI---------LINGYCKNKEIEGALSLYGEM 311
H + I LING C+ +I+ A + EM
Sbjct: 861 TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 920
Query: 312 LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYI 371
++ I P V + + L + + + A L M + + ++ T + CKN +
Sbjct: 921 IAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNV 980
Query: 372 VEAVELFRTLRILKCELDIRAYNCLIDGL 400
+EA+EL + +LD+ +YN LI GL
Sbjct: 981 IEALELRVVMSNCGLKLDLVSYNVLITGL 1009
Score = 124 bits (312), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 163/367 (44%), Gaps = 15/367 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P SF+ L + S+F + G P +TY L+ CK G +
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + V + +L+ +C + +A +LF ++ P+ +TY +LI+GL R
Sbjct: 601 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 660
Query: 135 TGHTIVALNLFEEMASGNG-----EFGVEGFVD--------KAKELFL-QMKDENINPDV 180
G T++A+ LF + A G + FVD KA F QM + PD+
Sbjct: 661 KGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDI 719
Query: 181 VTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 240
VT ++I G+ + LL EM +Q PN+ T+N+++ K + + L
Sbjct: 720 VTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRS 779
Query: 241 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKE 300
+I G+ P+ ++L+ G C + + ++ + G +++++LI+ C N E
Sbjct: 780 IILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGE 839
Query: 301 IEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRT 360
I A L M S GI D + + VL H+ + + + EM + G++ ++ Y
Sbjct: 840 INWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIG 899
Query: 361 FIDGLCK 367
I+GLC+
Sbjct: 900 LINGLCR 906
Score = 111 bits (278), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 156/355 (43%), Gaps = 25/355 (7%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + + N + ++ + L + + P+L TYNIL++ + K VS F++
Sbjct: 717 PDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL 776
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRV-FGCEPNVFTYNTLINGLY 133
I+ + P+ +T SL+ G+C ES ++E K + G E + +T+N LI+
Sbjct: 777 YRSIILNGILPDKLTCHSLVLGIC-ESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCC 835
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVD----------------KAKELFLQMKDENIN 177
G A +L + M S G+ D +++ + +M + I+
Sbjct: 836 ANGEINWAFDLVKVMTS----LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGIS 891
Query: 178 PDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 237
P+ Y +I G C D A + EM+ + P V + ++ L K GK DEA+ L
Sbjct: 892 PESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLL 951
Query: 238 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCK 297
L M+++ + P + TLM C G V A EL V M + G + SY++LI G C
Sbjct: 952 LRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCA 1011
Query: 298 NKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
++ A LY EM G + Y L L E AF D + +D +A
Sbjct: 1012 KGDMALAFELYEEMKGDGFLANATTYKALIRGLL---ARETAFSGADIILKDLLA 1063
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%)
Query: 249 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLY 308
N VY+ L+ + G + + E+F M G +V++ + ++ K+ E S
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181
Query: 309 GEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKN 368
EML + I PDV +N L VL E++ L +M++ G A TY T + CK
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241
Query: 369 SYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
A+EL ++ + D+ YN LI L
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDL 273
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Query: 3 IFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 62
+ +ML M+ P + SF L KN + L L +++ GL DL +YN+LI
Sbjct: 951 LLRFMLKMKLVPT-IASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1009
Query: 63 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 112
C G ++ F + + F NA T+ +LI+GL A A + K
Sbjct: 1010 CAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1059
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 188 bits (478), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 198/401 (49%), Gaps = 20/401 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P ++N + ++K + L + GL P+ TYN L+ +CK+G + F +
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + ++ P+ T+ LI GLC + E L ++ +P+V TYNTLI+G +
Sbjct: 298 VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFE 357
Query: 135 TGHTIVALNLFEEMASGN----------------GEFGVEGFVDKAKELFLQMKDENINP 178
G ++ A L E+M + E E K KEL + +P
Sbjct: 358 LGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKEL---VDMHGFSP 414
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D+VTY ++I+ + D + A ++ EM +G++ N +T N I+D LCK K+DEA LL
Sbjct: 415 DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLL 474
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
+ + G + Y TL+ GF +V +A E++ M+ + T TV +++ LI G C +
Sbjct: 475 NSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHH 534
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
+ E A+ + E+ G+ PD +N++ + + +VE+AF+ ++E + D +T
Sbjct: 535 GKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTC 594
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
++GLCK +A+ F TL I + E+D YN +I
Sbjct: 595 NILLNGLCKEGMTEKALNFFNTL-IEEREVDTVTYNTMISA 634
Score = 149 bits (376), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 180/398 (45%), Gaps = 31/398 (7%)
Query: 9 NMRPSPPPVCS-FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG- 66
N+ SPPP + F+I L +F+++ L P+L T N L+ +
Sbjct: 122 NLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPS 181
Query: 67 --RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPNVF 123
+S V +++ + N TF L+ G C E ++ +A + ++ F P+
Sbjct: 182 SFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNV 241
Query: 124 TYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTY 183
TYNT++ + + G + KEL L MK + P+ VTY
Sbjct: 242 TYNTILKAMSKKGR-----------------------LSDLKELLLDMKKNGLVPNRVTY 278
Query: 184 TSVIRGFCYANDWNEAKCLLIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
+++ G+C EA ++E+M Q V P++ T+N++++ LC G M E L+D M
Sbjct: 279 NNLVYGYCKLGSLKEA-FQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMK 337
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ ++P+ YNTL+DG G A++L ME+ G +++I + CK ++ E
Sbjct: 338 SLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKRE 397
Query: 303 GALSLYGEMLS-KGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E++ G PD+V Y+TL ++ + A ++ EM + G+ +T T T
Sbjct: 398 AVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTI 457
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+D LCK + EA L + +D Y LI G
Sbjct: 458 LDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMG 495
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 154/367 (41%), Gaps = 36/367 (9%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
+++M P + +++ L K L + + + G+ + T N +++ CK
Sbjct: 406 LVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKER 465
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
++ +L + F + VT+ +LI G E ++ +A ++ +++ P V T+N
Sbjct: 466 KLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFN 525
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
+LI GL G T +A+ F+E+A + + PD T+ S+
Sbjct: 526 SLIGGLCHHGKTELAMEKFDELA-----------------------ESGLLPDDSTFNSI 562
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
I G+C +A E + +P+ T N++++ LCK G ++A + +I+
Sbjct: 563 ILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIE-ER 621
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+ YNT++ FC ++ A +L ME G F+Y+ I+ ++ G LS
Sbjct: 622 EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMED----GKLS 677
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
E+L K ++ F + QVE ++ + + Y ID LC
Sbjct: 678 ETDELLKK--------FSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELC 729
Query: 367 KNSYIVE 373
+ E
Sbjct: 730 SRGRLKE 736
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 96/226 (42%), Gaps = 9/226 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +FN L G L + + + F L +GL PD T+N +I +CK GRV F
Sbjct: 519 PTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEF 578
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++ F P+ T L+ GLC E +A F L + E + TYNT+I+ +
Sbjct: 579 YNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL-IEEREVDTVTYNTMISAFCK 637
Query: 135 TGHTIVALNLFEEMASGNGE---FGVEGFVDKAKEL-FLQMKDENINPDVVTYTSVIRGF 190
A +L EM E F F+ E L DE + + S+ R
Sbjct: 638 DKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDL 697
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
+ N A E ++ + ++ ++DELC G++ E SR
Sbjct: 698 QVETEKNPATSESKEELNT----EAIAYSDVIDELCSRGRLKEHSR 739
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 192/389 (49%), Gaps = 20/389 (5%)
Query: 27 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPN 86
++K + +LF + ++GL P Y LI +C+ V G+ +L + + +
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416
Query: 87 AVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFE 146
T+ +++KG+C+ + A + ++ GC PNV Y TLI + A+ + +
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 147 EMASGNGEFGVEGFV----------------DKAKELFLQMKDENINPDVVTYTSVIRGF 190
EM E G+ + D+A+ ++M + + P+ TY + I G+
Sbjct: 477 EMK----EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Query: 191 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 250
A+++ A + EM + GV PN V +++E CK GK+ EA M+ G+ +A
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDA 592
Query: 251 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGE 310
Y LM+G +V+ A+E+F M G VFSY +LING+ K ++ A S++ E
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 311 MLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSY 370
M+ +G+ P+V+IYN L ++E+A +L DEM G+ + TY T IDG CK+
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 371 IVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ EA LF +++ D Y L+DG
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Score = 174 bits (442), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 201/413 (48%), Gaps = 22/413 (5%)
Query: 2 CIFDYMLNMRPSPPPVCSFNILFG-CLAKN--KHYDTVLSLFKRLNSTGLFPDLYTYNIL 58
+FD M+ P +++ G C KN + Y+ ++ + KR + YTY +
Sbjct: 368 ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKR----NIVISPYTYGTV 423
Query: 59 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC 118
+ C G + + ++ ++ S PN V +T+LIK SR +A + +++ G
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483
Query: 119 EPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN--------GEFGVEGFVD-----KAK 165
P++F YN+LI GL + A + EM G F + G+++ A
Sbjct: 484 APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF-ISGYIEASEFASAD 542
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
+ +M++ + P+ V T +I +C EA M+DQG+ + T+ V+M+ L
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
KN K+D+A + M G+ P+ F Y L++GF G + +A +F M G T V
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
Y++L+ G+C++ EIE A L EM KG+ P+ V Y T+ + + AF+LFDE
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLID 398
M+ G+ D++ Y T +DG C+ + + A+ +F T + C +N LI+
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALIN 774
Score = 155 bits (392), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 189/442 (42%), Gaps = 59/442 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +N L L+K K D S + GL P+ +TY I+ + + +
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKY 544
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ + PN V T LI C + +++EA + + + G + TY L+NGL++
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK 604
Query: 135 TGHTIVALNLFEEMASGNG------EFGV--EGF-----VDKAKELFLQMKDENINPDVV 181
A +F EM G G +GV GF + KA +F +M +E + P+V+
Sbjct: 605 NDKVDDAEEIFREM-RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 182 TYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
Y ++ GFC + + +AK LL EM +G+ PN VT+ I+D CK+G + EA RL D M
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV---------------- 285
G+ P++FVY TL+DG C V RA +F GC +
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKT 782
Query: 286 -----------------------FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVI 322
+Y+I+I+ CK +E A L+ +M + + P V+
Sbjct: 783 ELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVIT 842
Query: 323 YNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
Y +L ++ + F +FDE G+ D Y I+ K +A+ L +
Sbjct: 843 YTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMF 902
Query: 383 ILK-----CELDIRAYNCLIDG 399
C+L I L+ G
Sbjct: 903 AKNAVDDGCKLSISTCRALLSG 924
Score = 144 bits (364), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 167/382 (43%), Gaps = 55/382 (14%)
Query: 41 KRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 100
K + G+ P+ LIN +CK G+V ++ +A T+T L+ GL
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605
Query: 101 SRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGN-------- 152
++ +A +F ++R G P+VF+Y LING + G+ A ++F+EM
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 153 ----GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMD 208
G F G ++KAKEL +M + ++P+ VTY ++I G+C + D EA L EM
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL 725
Query: 209 QGVQPNVVTFNVIMDELCKNGKMDEA---------------------------------- 234
+G+ P+ + ++D C+ ++ A
Sbjct: 726 KGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELK 785
Query: 235 ----SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+RL+D +PN YN ++D C G + AKELF M++ TV +Y+
Sbjct: 786 TEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTS 845
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEM---- 346
L+NGY K ++ E ++ GI+PD ++Y+ + + +A L D+M
Sbjct: 846 LLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKN 905
Query: 347 -QRDGVAADTWTYRTFIDGLCK 367
DG T R + G K
Sbjct: 906 AVDDGCKLSISTCRALLSGFAK 927
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 166/369 (44%), Gaps = 44/369 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +L L + D ++K + + D+ TY++LI C+ G V G V
Sbjct: 184 PRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDV 243
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + + F + +K ES I + G P +TY+ LI+GL +
Sbjct: 244 LFKTEKE-FRTATLNVDGALK--LKESMICK-----------GLVPLKYTYDVLIDGLCK 289
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
++ AK L ++M ++ D TY+ +I G
Sbjct: 290 IKR-----------------------LEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGR 326
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ + AK L+ EM+ G+ ++ + + K G M++A L D MI G+ P A Y
Sbjct: 327 NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYA 386
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L++G+C V + EL V M+ + ++Y ++ G C + +++GA ++ EM++
Sbjct: 387 SLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS 446
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCK------- 367
G +P+VVIY TL + + A ++ EM+ G+A D + Y + I GL K
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Query: 368 NSYIVEAVE 376
S++VE VE
Sbjct: 507 RSFLVEMVE 515
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 147/325 (45%), Gaps = 20/325 (6%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V S+ +L +K + S+F + GL P++ YN+L+ FC+ G + +
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L + PNAVT+ ++I G C + EA LF ++++ G P+ F Y TL++G R
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Query: 135 TGHTIVALNLF----EEMASGNGEFGVE-------GFVDKAKELFLQMKDENIN----PD 179
A+ +F + AS F G + E+ ++ D + + P+
Sbjct: 745 LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN 804
Query: 180 VVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 239
VTY +I C + AK L +M + + P V+T+ +++ K G+ E + D
Sbjct: 805 DVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFD 864
Query: 240 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM-----GCTHTVFSYSILING 294
I G+ P+ +Y+ +++ F G +A L M + GC ++ + L++G
Sbjct: 865 EAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSG 924
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPD 319
+ K E+E A + M+ PD
Sbjct: 925 FAKVGEMEVAEKVMENMVRLQYIPD 949
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 186 bits (471), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 120/397 (30%), Positives = 190/397 (47%), Gaps = 13/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V F L AK D+ LSL + S+ L D+ YN+ I+ F K+G+V +
Sbjct: 201 PTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKF 260
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
I + P+ VT+TS+I LC +R+ EA +F L P + YNT+I G
Sbjct: 261 FHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGS 320
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G A +L E + V G VD+A ++F +MK ++ P++ T
Sbjct: 321 AGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLST 379
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y +I C A + A L M G+ PNV T N+++D LCK+ K+DEA + + M
Sbjct: 380 YNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMD 439
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
P+ + +L+DG GRV+ A +++ M C Y+ LI + + E
Sbjct: 440 YKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKE 499
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
+Y +M+++ PD+ + NT +F+ + E+ +F+E++ D +Y I
Sbjct: 500 DGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILI 559
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
GL K + E ELF +++ C LD RAYN +IDG
Sbjct: 560 HGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDG 596
Score = 177 bits (449), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 204/402 (50%), Gaps = 13/402 (3%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
+ S P V ++N + CL K D L +F+ + P+L TYNILI+ C+ G++
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDT 395
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
F + + ++ PN T ++ LC ++ EA A+F ++ C P+ T+ +LI+
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLID 455
Query: 131 GLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINP 178
GL + G A ++E+M + F G + +++ M ++N +P
Sbjct: 456 GLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSP 515
Query: 179 DVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 238
D+ + + A + + + + E+ + P+ ++++++ L K G +E L
Sbjct: 516 DLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELF 575
Query: 239 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKN 298
M + G + YN ++DGFC G+VN+A +L M++ G TV +Y +I+G K
Sbjct: 576 YSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKI 635
Query: 299 KEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTY 358
++ A L+ E SK I+ +VVIY++L ++ +++ A+ + +E+ + G+ + +T+
Sbjct: 636 DRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTW 695
Query: 359 RTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ +D L K I EA+ F++++ LKC + Y LI+GL
Sbjct: 696 NSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737
Score = 176 bits (447), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 191/437 (43%), Gaps = 47/437 (10%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 70
+ + P + ++NIL L + DT L + GLFP++ T NI+++ CK ++
Sbjct: 371 KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDE 430
Query: 71 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLIN 130
+ + TP+ +TF SLI GL R+ +A ++ K+ C N Y +LI
Sbjct: 431 ACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIK 490
Query: 131 GLYRTGHTIVALNLFEEM--------------------ASGNGEFG-------------- 156
+ G ++++M +G E G
Sbjct: 491 NFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVP 550
Query: 157 -------------VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLL 203
GF ++ ELF MK++ D Y VI GFC N+A LL
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610
Query: 204 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
EM +G +P VVT+ ++D L K ++DEA L + + N +Y++L+DGF
Sbjct: 611 EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKV 670
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
GR++ A + + G T +++++ L++ K +EI AL + M P+ V Y
Sbjct: 671 GRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTY 730
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRI 383
L L ++ + +AF + EMQ+ G+ T +Y T I GL K I EA LF +
Sbjct: 731 GILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKA 790
Query: 384 LKCELDIRAYNCLIDGL 400
D YN +I+GL
Sbjct: 791 NGGVPDSACYNAMIEGL 807
Score = 173 bits (438), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 188/415 (45%), Gaps = 47/415 (11%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V + NI+ L K++ D ++F+ ++ PD T+ LI+ K+GRV + V
Sbjct: 410 PNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKV 469
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
++L S N++ +TSLIK R + ++ + C P++ NT ++ +++
Sbjct: 470 YEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFK 529
Query: 135 TGHTIVALNLFEEMASGN-----GEFGV-------EGFVDKAKELFLQMKDENINPDVVT 182
G +FEE+ + + + GF ++ ELF MK++ D
Sbjct: 530 AGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRA 589
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK--------------- 227
Y VI GFC N+A LL EM +G +P VVT+ ++D L K
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 649
Query: 228 --------------------NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 267
G++DEA +L+ ++Q G+ PN + +N+L+D +N
Sbjct: 650 SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEIN 709
Query: 268 RAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLF 327
A F SM+ + CT +Y ILING CK ++ A + EM +G+KP + Y T+
Sbjct: 710 EALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMI 769
Query: 328 VVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLR 382
L + + A LFD + +G D+ Y I+GL + ++A LF R
Sbjct: 770 SGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETR 824
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 172/394 (43%), Gaps = 31/394 (7%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDL-YTYNILINCFCKMG 66
L+ +P P + G L + K + + F+ P +YN L+ +
Sbjct: 59 LSFKPQP------EFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCR 112
Query: 67 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYN 126
+LG + + F P+ T ++ G +++ E + +R F P Y
Sbjct: 113 NFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYT 172
Query: 127 TLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSV 186
TLI H+ + L LF++M E G E P V +T++
Sbjct: 173 TLIGAFSAVNHSDMMLTLFQQMQ----ELGYE-------------------PTVHLFTTL 209
Query: 187 IRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGV 246
IRGF + A LL EM + ++V +NV +D K GK+D A + + G+
Sbjct: 210 IRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGL 269
Query: 247 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALS 306
+P+ Y +++ C R++ A E+F +E ++Y+ +I GY + + A S
Sbjct: 270 KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYS 329
Query: 307 LYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLC 366
L +KG P V+ YN + L ++ +V+ A K+F+EM++D A + TY ID LC
Sbjct: 330 LLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLC 388
Query: 367 KNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ + A EL +++ ++R N ++D L
Sbjct: 389 RAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRL 422
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 110/248 (44%), Gaps = 12/248 (4%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ + LAK D LF+ S + ++ Y+ LI+ F K+GR+ +++
Sbjct: 620 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
L +++ TPN T+ SL+ L I EA F ++ C PN TY LINGL +
Sbjct: 680 LEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCK 739
Query: 135 TGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELFLQMKDENINPDVVT 182
A ++EM + G + +A LF + K PD
Sbjct: 740 VRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSAC 799
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G N +A L E +G+ + T V++D L KN +++A+ + ++
Sbjct: 800 YNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLR 859
Query: 243 QIGVRPNA 250
+ G +A
Sbjct: 860 ETGKARHA 867
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 184 bits (466), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 194/393 (49%), Gaps = 16/393 (4%)
Query: 3 IFDYMLNMRPSPPPVCSFNIL-FGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 61
+FD M ++R P S+ ++ GC K + L + G PD T +++
Sbjct: 204 VFDEM-SVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQR-GFIPDNATCTLILTA 261
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
C+ G V+ +++ F PN + FTSLI GLC + I +A + ++ G +PN
Sbjct: 262 LCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPN 321
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGN-------------GEFGVEGFVDKAKELF 168
V+T+ LI+GL + G T A LF ++ + G + E +++A+ LF
Sbjct: 322 VYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLF 381
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+MK++ + P+V TYT++I G C A + A L+ M D+G PN+ T+N +D LCK
Sbjct: 382 SRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKK 441
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
+ EA LL+ G+ + Y L+ C +N+A F M G +
Sbjct: 442 SRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLN 501
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ILI +C+ K+++ + L+ ++S G+ P Y ++ + ++ A K F M+R
Sbjct: 502 NILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKR 561
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
G D++TY + I GLCK S + EA +L+ +
Sbjct: 562 HGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 594
Score = 159 bits (402), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 175/389 (44%), Gaps = 34/389 (8%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +F L L K + + + G P++YT+ LI+ CK G F +
Sbjct: 285 PNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRL 344
Query: 75 LGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLY 133
+++RS + PN T+TS+I G C E ++ A LF++++ G PNV TY TLING
Sbjct: 345 FLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC 404
Query: 134 RTGHTIVALNLFEEMASGNGEFGVEGFVD-------------------KAKELFLQMKDE 174
+ G A L M G EGF+ +A EL +
Sbjct: 405 KAGSFGRAYELMNLM-------GDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSC 457
Query: 175 NINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 234
+ D VTYT +I+ C ND N+A M G + ++ N+++ C+ KM E+
Sbjct: 458 GLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 517
Query: 235 SRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILING 294
RL L++ +G+ P Y +++ +C G ++ A + F +M+ GC F+Y LI+G
Sbjct: 518 ERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISG 577
Query: 295 YCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
CK ++ A LY M+ +G+ P V TL + + A L + + +
Sbjct: 578 LCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDK-----K 632
Query: 355 TW--TYRTFIDGLCKNSYIVEAVELFRTL 381
W T RT + LC + A F+ L
Sbjct: 633 LWIRTVRTLVRKLCSEKKVGVAALFFQKL 661
Score = 139 bits (349), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 161/349 (46%), Gaps = 13/349 (3%)
Query: 62 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPN 121
F ++GR++ ++ + TP+++T +++ I A +F ++ V G P+
Sbjct: 157 FSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPD 216
Query: 122 VFTYNTLINGLYRTGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFL 169
+Y ++ G +R G A M G V++A F
Sbjct: 217 SSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFR 276
Query: 170 QMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 229
+M D P+++ +TS+I G C +A +L EM+ G +PNV T ++D LCK G
Sbjct: 277 KMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRG 336
Query: 230 KMDEASRL-LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
++A RL L L+ +PN Y +++ G+C ++NRA+ LF M+ G V +Y
Sbjct: 337 WTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTY 396
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
+ LING+CK A L M +G P++ YN L + + A++L ++
Sbjct: 397 TTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFS 456
Query: 349 DGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLI 397
G+ AD TY I CK + I +A+ F + E D+R N LI
Sbjct: 457 CGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILI 505
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 120/249 (48%), Gaps = 2/249 (0%)
Query: 154 EFGVE-GFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQ 212
E VE G ++ A+ +F +M + PD +Y ++ G EA L M+ +G
Sbjct: 190 EIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFI 249
Query: 213 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 272
P+ T +I+ LC+NG ++ A MI +G +PN + +L+DG C G + +A E+
Sbjct: 250 PDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEM 309
Query: 273 FVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEML-SKGIKPDVVIYNTLFVVLF 331
M G V++++ LI+G CK E A L+ +++ S KP+V Y ++
Sbjct: 310 LEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYC 369
Query: 332 EIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIR 391
+ ++ RA LF M+ G+ + TY T I+G CK A EL + +I
Sbjct: 370 KEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIY 429
Query: 392 AYNCLIDGL 400
YN ID L
Sbjct: 430 TYNAAIDSL 438
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 136/333 (40%), Gaps = 15/333 (4%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +F ++ P V ++ + G K + LF R+ GLFP++ TY LIN
Sbjct: 342 FRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 401
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
CK G + ++ + F PN T+ + I LC +SR EA L K G E
Sbjct: 402 GHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEA 461
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASGNGE------------FGVEGFVDKAKELF 168
+ TY LI + AL F M E F + + +++ LF
Sbjct: 462 DGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLF 521
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+ + P TYTS+I +C D + A M G P+ T+ ++ LCK
Sbjct: 522 QLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKK 581
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
+DEA +L + MI G+ P TL +C + N + + +E + + +
Sbjct: 582 SMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYC---KRNDSANAMILLEPLDKKLWIRTV 638
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVV 321
L+ C K++ A + ++L K D V
Sbjct: 639 RTLVRKLCSEKKVGVAALFFQKLLEKDSSADRV 671
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 111/215 (51%), Gaps = 1/215 (0%)
Query: 186 VIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 245
++R F NEA ++++M +QG+ P+ +T N +++ + G ++ A + D M G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 246 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGAL 305
V P++ Y ++ G G++ A M G + ++++ C+N + A+
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 306 SLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGL 365
+ +M+ G KP+++ + +L L + +++AF++ +EM R+G + +T+ IDGL
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 366 CKNSYIVEAVELF-RTLRILKCELDIRAYNCLIDG 399
CK + +A LF + +R + ++ Y +I G
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGG 367
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 15/181 (8%)
Query: 220 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 279
V D L NG + +A ++ M++ F GR+N A + + M++
Sbjct: 132 VTADSLLANGNLQKAHEVMRCMLR---------------NFSEIGRLNEAVGMVMDMQNQ 176
Query: 280 GCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERA 339
G T + + + ++ + IE A +++ EM +G+ PD Y + + F +++ A
Sbjct: 177 GLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEA 236
Query: 340 FKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
+ M + G D T + LC+N + A+ FR + L + ++ + LIDG
Sbjct: 237 DRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDG 296
Query: 400 L 400
L
Sbjct: 297 L 297
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 183 bits (464), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 188/379 (49%), Gaps = 21/379 (5%)
Query: 21 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 80
++L A N ++ FKR G + L+ K R + V ++R
Sbjct: 157 DMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIR 216
Query: 81 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIV 140
PN TF +I LC ++ +A + ++V+GC PNV +YNTLI+G + G
Sbjct: 217 RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLG---- 272
Query: 141 ALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAK 200
GNG+ + KA + +M + +++P++ T+ +I GF ++ +
Sbjct: 273 ----------GNGK------MYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSM 316
Query: 201 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 260
+ EM+DQ V+PNV+++N +++ LC GK+ EA + D M+ GV+PN YN L++GF
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376
Query: 261 CLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDV 320
C + A ++F S++ G T Y++LI+ YCK +I+ +L EM +GI PDV
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436
Query: 321 VIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRT 380
YN L L +E A KLFD++ G+ D T+ ++G C+ +A L +
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKE 495
Query: 381 LRILKCELDIRAYNCLIDG 399
+ + + YN ++ G
Sbjct: 496 MSKMGLKPRHLTYNIVMKG 514
Score = 171 bits (433), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 191/382 (50%), Gaps = 29/382 (7%)
Query: 22 ILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRS 81
++ L +N+ D V ++K + + P+++T+N++IN CK G+++ V+ +
Sbjct: 194 LMIALLKENRSAD-VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVY 252
Query: 82 CFTPNAVTFTSLIKGLC---AESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHT 138
+PN V++ +LI G C ++ +A A+ ++ PN+ T+N LI+G ++ +
Sbjct: 253 GCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNL 312
Query: 139 IVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNE 198
++ +F+EM D+++ P+V++Y S+I G C +E
Sbjct: 313 PGSMKVFKEML-----------------------DQDVKPNVISYNSLINGLCNGGKISE 349
Query: 199 AKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 258
A + +M+ GVQPN++T+N +++ CKN + EA + + G P +YN L+D
Sbjct: 350 AISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLID 409
Query: 259 GFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP 318
+C G+++ L ME G V +Y+ LI G C+N IE A L+ ++ SKG+ P
Sbjct: 410 AYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-P 468
Query: 319 DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELF 378
D+V ++ L + +A L EM + G+ TY + G CK + A +
Sbjct: 469 DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMR 528
Query: 379 RTL-RILKCELDIRAYNCLIDG 399
+ + + +++ +YN L+ G
Sbjct: 529 TQMEKERRLRMNVASYNVLLQG 550
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 162/328 (49%), Gaps = 23/328 (7%)
Query: 15 PPVCSFNILFGC---LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 71
P V S+N L L N ++ K + + P+L T+NILI+ F K +
Sbjct: 256 PNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGS 315
Query: 72 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLING 131
V +L PN +++ SLI GLC +I EA ++ K+ G +PN+ TYN LING
Sbjct: 316 MKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALING 375
Query: 132 LYRTGHTIVALNLFEEMASGNGEFGVE---------------GFVDKAKELFLQMKDENI 176
+ AL++F S G+ V G +D L +M+ E I
Sbjct: 376 FCKNDMLKEALDMF---GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI 432
Query: 177 NPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 236
PDV TY +I G C + AK L ++ +G+ P++VTF+++M+ C+ G+ +A+
Sbjct: 433 VPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAM 491
Query: 237 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES-MGCTHTVFSYSILINGY 295
LL M ++G++P YN +M G+C G + A + ME V SY++L+ GY
Sbjct: 492 LLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGY 551
Query: 296 CKNKEIEGALSLYGEMLSKGIKPDVVIY 323
+ ++E A L EML KG+ P+ + Y
Sbjct: 552 SQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 182/377 (48%), Gaps = 17/377 (4%)
Query: 11 RPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG---R 67
R P V +FN++ L K + + + + G P++ +YN LI+ +CK+G +
Sbjct: 217 RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGK 276
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ VL ++ + +PN TF LI G + + + +F ++ +PNV +YN+
Sbjct: 277 MYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNS 336
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFG-------VEGF-----VDKAKELFLQMKDEN 175
LINGL G A+++ ++M S + + GF + +A ++F +K +
Sbjct: 337 LINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQG 396
Query: 176 INPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 235
P Y +I +C ++ L EM +G+ P+V T+N ++ LC+NG ++ A
Sbjct: 397 AVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAK 456
Query: 236 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGY 295
+L D + G+ P+ ++ LM+G+C G +A L M MG +Y+I++ GY
Sbjct: 457 KLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGY 515
Query: 296 CKNKEIEGALSLYGEM-LSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAAD 354
CK ++ A ++ +M + ++ +V YN L + ++E A L +EM G+ +
Sbjct: 516 CKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575
Query: 355 TWTYRTFIDGLCKNSYI 371
TY + + ++
Sbjct: 576 RITYEIVKEEMVDQGFV 592
Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 147/319 (46%), Gaps = 30/319 (9%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P + +FNIL K+ + + +FK + + P++ +YN LIN C G++S +
Sbjct: 294 PNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISM 353
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ + PN +T+ +LI G C + EA +F ++ G P YN LI+ +
Sbjct: 354 RDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCK 413
Query: 135 TGHTIVALNLFEEMASGN-----GEFGV-------EGFVDKAKELFLQMKDENINPDVVT 182
G L EEM G + G ++ AK+LF Q+ + + PD+VT
Sbjct: 414 LGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVT 472
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM- 241
+ ++ G+C + +A LL EM G++P +T+N++M CK G + A+ + M
Sbjct: 473 FHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQME 532
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ +R N YN L+ G+ G++ A L M G +Y I+ KE
Sbjct: 533 KERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV-------KE- 584
Query: 302 EGALSLYGEMLSKGIKPDV 320
EM+ +G PD+
Sbjct: 585 --------EMVDQGFVPDI 595
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 118/237 (49%), Gaps = 3/237 (1%)
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
++ +M I P+V T+ VI C N+A+ ++ +M G PNVV++N ++D C
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 227 K---NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTH 283
K NGKM +A +L M++ V PN +N L+DGF + + ++F M
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 284 TVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLF 343
V SY+ LING C +I A+S+ +M+S G++P+++ YN L + ++ A +F
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Query: 344 DEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
++ G T Y ID CK I + L + D+ YNCLI GL
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGL 446
>sp|Q8L6Y3|PP396_ARATH Pentatricopeptide repeat-containing protein At5g24830
OS=Arabidopsis thaliana GN=At5g24830 PE=2 SV=1
Length = 593
Score = 182 bits (461), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 193/385 (50%), Gaps = 20/385 (5%)
Query: 34 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 93
D L L K++ +G+ P L T+N L+N CK G + ++ + +PN V++ +L
Sbjct: 138 DAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTL 197
Query: 94 IKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALN---LFEEM-- 148
IKGLC+ + + +A LF + +G PN T N +++ L + G ++ N L EE+
Sbjct: 198 IKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKG--VIGNNNKKLLEEILD 255
Query: 149 -ASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
+ N + G V +A E++ +M +N+ D V Y +IRG C + +
Sbjct: 256 SSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGN 315
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
A + +M+ +GV P+V T+N ++ LCK GK DEA L M GV P+ Y
Sbjct: 316 MVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKV 375
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
++ G C+ G VNRA E +SM V ++++I+GY + + ALS+ MLS G
Sbjct: 376 IIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYG 435
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAV 375
+KP+V N L + ++ A+ + +EM+ + DT TY + C ++ A
Sbjct: 436 VKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAF 495
Query: 376 ELFRTLRILKCELDIRAYNCLIDGL 400
+L+ + C+ DI Y L+ GL
Sbjct: 496 QLYDEMLRRGCQPDIITYTELVRGL 520
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 169/397 (42%), Gaps = 65/397 (16%)
Query: 7 MLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 66
M M PSP V S+N L L + D L LF +N G+ P+ T NI+++ C+ G
Sbjct: 182 MREMGPSPNCV-SYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKG 240
Query: 67 RVSHG-------------------FVVLGRILRSCFT--------------------PNA 87
+ + V+ ++ SCF ++
Sbjct: 241 VIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADS 300
Query: 88 VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEE 147
V + +I+GLC+ ++ A + G P+VFTYNTLI+ L + G A +L
Sbjct: 301 VVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGT 360
Query: 148 MASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAND 195
M +G + G V++A E L M ++ P+V+ + VI G+ D
Sbjct: 361 MQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGD 420
Query: 196 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 255
+ A +L M+ GV+PNV T N ++ K G++ +A + + M + P+ YN
Sbjct: 421 TSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNL 480
Query: 256 LMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKG 315
L+ C G + A +L+ M GC + +Y+ L+ G C ++ A SL + + G
Sbjct: 481 LLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATG 540
Query: 316 IKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVA 352
I D V F++L K + +QR G A
Sbjct: 541 ITIDHVP----FLIL---------AKKYTRLQRPGEA 564
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 120/267 (44%), Gaps = 23/267 (8%)
Query: 47 GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 106
G+ PD++TYN LI+ CK G+ + G + P+ +++ +I+GLC + A
Sbjct: 330 GVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRA 389
Query: 107 AALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKE 166
+ P V +N +I+G R G T AL++ M S +GV+
Sbjct: 390 NEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLS----YGVK-------- 437
Query: 167 LFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 226
P+V T ++I G+ +A + EM + P+ T+N+++ C
Sbjct: 438 -----------PNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAAC 486
Query: 227 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVF 286
G + A +L D M++ G +P+ Y L+ G C GR+ +A+ L +++ G T
Sbjct: 487 TLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHV 546
Query: 287 SYSILINGYCKNKEIEGALSLYGEMLS 313
+ IL Y + + A +Y + L+
Sbjct: 547 PFLILAKKYTRLQRPGEAYLVYKKWLA 573
Score = 105 bits (261), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 117/248 (47%), Gaps = 4/248 (1%)
Query: 157 VEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVV 216
++G +D A L +M + P ++T+ ++ G C A +A L+ EM + G PN V
Sbjct: 133 LQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCV 192
Query: 217 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV-NRAKELF-- 273
++N ++ LC +D+A L + M + G+RPN N ++ C G + N K+L
Sbjct: 193 SYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEE 252
Query: 274 -VSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFE 332
+ + +IL++ KN + AL ++ EM K + D V+YN + L
Sbjct: 253 ILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCS 312
Query: 333 IHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRA 392
+ A+ +M + GV D +TY T I LCK EA +L T++ D +
Sbjct: 313 SGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQIS 372
Query: 393 YNCLIDGL 400
Y +I GL
Sbjct: 373 YKVIIQGL 380
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 87/219 (39%), Gaps = 39/219 (17%)
Query: 221 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 280
IM +LC GK+D A L MI GV P +N L++G C G + +A L M MG
Sbjct: 127 IMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMG 186
Query: 281 CTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKP---------------------- 318
+ SY+ LI G C ++ AL L+ M GI+P
Sbjct: 187 PSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNN 246
Query: 319 -----------------DVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
D+VI L F+ V +A +++ EM + V AD+ Y
Sbjct: 247 KKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVI 306
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
I GLC + +V A + D+ YN LI L
Sbjct: 307 IRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISAL 345
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 181 bits (460), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 187/397 (47%), Gaps = 12/397 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +N+L L K K + LF + + L P L TYN LI+ +CK G F V
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV 271
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R+ P+ +TF +L+KGL + +A + +++ G P+ FT++ L +G
Sbjct: 272 RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS 331
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
AL ++E + EG ++KA+E+ + + + P+ V
Sbjct: 332 NEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVI 391
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I G+C D A+ + M QG++P+ + +N ++ C+ G+M+ A + ++ M
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
GV P+ YN L+ G+ ++ ++ ME G V SY LIN CK ++
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLL 511
Query: 303 GALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFI 362
A + +M +G+ P V IYN L ++E AF+ EM + G+ + TY T I
Sbjct: 512 EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLI 571
Query: 363 DGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
DGL + EA +L + + D+ YN LI G
Sbjct: 572 DGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISG 608
Score = 178 bits (452), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 192/398 (48%), Gaps = 14/398 (3%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P S +L L K K + +++F + + P + Y I K+ V G +
Sbjct: 142 PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLEL 201
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
R+ P+ + LI GLC R+ +A LF ++ P++ TYNTLI+G +
Sbjct: 202 FNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCK 261
Query: 135 TGHTIVALNLFEEMASGNGEFGV------------EGFVDKAKELFLQMKDENINPDVVT 182
G+ + + E M + + E + G V+ A+ + +MKD PD T
Sbjct: 262 AGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFT 321
Query: 183 YTSVIRGFCYANDWNEAKCLLIE-MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 241
++ + G+ +N+ EA + E +D GV+ N T +++++ LCK GK+++A +L
Sbjct: 322 FSILFDGYS-SNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGRE 380
Query: 242 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEI 301
+ G+ PN +YNT++DG+C G + A+ +ME G +Y+ LI +C+ E+
Sbjct: 381 MAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEM 440
Query: 302 EGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTF 361
E A +M KG+ P V YN L ++ ++ F + EM+ +G + +Y T
Sbjct: 441 ENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTL 500
Query: 362 IDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
I+ LCK S ++EA + R + +R YN LIDG
Sbjct: 501 INCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG 538
Score = 172 bits (437), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 197/429 (45%), Gaps = 45/429 (10%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P +F+ILF + N+ + L +++ +G+ + YT +IL+N CK G++ +
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
LGR + PN V + ++I G C + ++ A + G +P+ YN LI
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCE 436
Query: 135 TGHTIVALNLFEEMASGN------------GEFGVEGFVDKAKELFLQMKDENINPDVVT 182
G A +M G +G + DK ++ +M+D P+VV+
Sbjct: 437 LGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVS 496
Query: 183 YTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 242
Y ++I C + EA+ + +M D+GV P V +N+++D C GK+++A R M+
Sbjct: 497 YGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEML 556
Query: 243 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIE 302
+ G+ N YNTL+DG +TG+++ A++L + + G VF+Y+ LI+GY ++
Sbjct: 557 KKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQ 616
Query: 303 GALSLYGEMLSKGI-------------------------------KPDVVIYNTLFVVLF 331
++LY EM GI KPD+++YN + +
Sbjct: 617 RCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHC-Y 675
Query: 332 EIH-QVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDI 390
+H +E+AF L +M + D TY + I G K + E L + + E +
Sbjct: 676 AVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEA 735
Query: 391 RAYNCLIDG 399
YN ++ G
Sbjct: 736 DTYNIIVKG 744
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 170/372 (45%), Gaps = 35/372 (9%)
Query: 59 INCFCKMGRVSHGFVVLGRILRSCFTP--------NAVTFTS----------LIKGLCAE 100
+ + R+ VL +LRS TP +A + +S L+ L E
Sbjct: 62 LRVLLQQNRIETARGVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLNE 121
Query: 101 SR-IMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGVEG 159
S+ I EAA LF LR G P+ + L++ L +T V +N+F + + F
Sbjct: 122 SKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESD--FRPSK 179
Query: 160 F--------------VDKAKELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIE 205
F V K ELF +MK + I P V Y +I G C N+A+ L E
Sbjct: 180 FMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDE 239
Query: 206 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 265
M+ + + P+++T+N ++D CK G +++ ++ + M + P+ +NTL+ G G
Sbjct: 240 MLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGM 299
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
V A+ + M+ +G F++SIL +GY N++ E AL +Y + G+K + +
Sbjct: 300 VEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSI 359
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
L L + ++E+A ++ G+ + Y T IDG C+ +V A +
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 386 CELDIRAYNCLI 397
+ D AYNCLI
Sbjct: 420 MKPDHLAYNCLI 431
Score = 129 bits (323), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 160/371 (43%), Gaps = 56/371 (15%)
Query: 8 LNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 67
+ ++ P V ++NIL G + +D + K + G P++ +Y LINC CK +
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 68 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNT 127
+ +V + +P + LI G C++ +I +A ++ G E N+ TYNT
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 128 LINGLYRTGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVI 187
LI+GL TG + +A++L L++ + + PDV TY S+I
Sbjct: 570 LIDGLSMTGK-----------------------LSEAEDLLLEISRKGLKPDVFTYNSLI 606
Query: 188 RGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK-------------------- 227
G+ +A + L EM G++P + T+++++ LC
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFGEMSLKPDL 665
Query: 228 ------------NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
+G M++A L MI+ + + YN+L+ G G++ + L
Sbjct: 666 LVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDE 725
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
M + +Y+I++ G+C+ K+ A Y EM KG DV I N L L E +
Sbjct: 726 MNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWR 785
Query: 336 VERAFKLFDEM 346
+ A + EM
Sbjct: 786 SKEAEIVISEM 796
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 100/203 (49%)
Query: 197 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 256
+EA L + ++G+ P+ + +++D L K + + +++ RP+ F+Y
Sbjct: 126 SEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKA 185
Query: 257 MDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGI 316
+ V + ELF M+ +VF Y++LI+G CK K + A L+ EML++ +
Sbjct: 186 IQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRL 245
Query: 317 KPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVE 376
P ++ YNTL + E++FK+ + M+ D + T+ T + GL K + +A
Sbjct: 246 LPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAEN 305
Query: 377 LFRTLRILKCELDIRAYNCLIDG 399
+ + ++ L D ++ L DG
Sbjct: 306 VLKEMKDLGFVPDAFTFSILFDG 328
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 65/134 (48%)
Query: 266 VNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNT 325
++ A +LF ++ + G + S ++L++ K K+ ++++ +L +P +Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 326 LFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILK 385
++ V + +LF+ M+ D + + Y IDGLCK + +A +LF + +
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 386 CELDIRAYNCLIDG 399
+ YN LIDG
Sbjct: 245 LLPSLITYNTLIDG 258
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (42%)
Query: 231 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSI 290
+ EA+ L + G+ P++ L+D T + +F+++ + F Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 291 LINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDG 350
I K ++ L L+ M I P V IYN L L + ++ A +LFDEM
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 351 VAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDGL 400
+ TY T IDG CK ++ ++ ++ E + +N L+ GL
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGL 294
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 9/136 (6%)
Query: 270 KELFV--SMESMGCTHTVFSY---SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYN 324
KELF S+ S H FSY S+L+N ++K I A L+ + ++GI P
Sbjct: 93 KELFSAFSLSSPSLKHD-FSYLLLSVLLN---ESKMISEAADLFFALRNEGIYPSSDSLT 148
Query: 325 TLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRIL 384
L L + Q +F + + Y I K S + + +ELF ++
Sbjct: 149 LLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHD 208
Query: 385 KCELDIRAYNCLIDGL 400
+ + YN LIDGL
Sbjct: 209 RIYPSVFIYNVLIDGL 224
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 197/430 (45%), Gaps = 47/430 (10%)
Query: 17 VCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 76
V F+ K+ T ++KR+ G+ P++ TY ILI C+ GR+ F + G
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 77 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTG 136
+IL+ P+ VT++SLI G C + AL+ + G P+V Y L++GL + G
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 137 HTIVALNLFEEMASGNGEFGVEGF------------VDKAKELFLQMKDENINPDVVTYT 184
+ A+ +M + V F D+A ++F M I PDV T+T
Sbjct: 476 LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT 535
Query: 185 SVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK-------------- 230
+V+R EA L M G++P+ + + ++D CK+ K
Sbjct: 536 TVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN 595
Query: 231 ---------------------MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 269
+++AS+ + +I+ + P+ YNT++ G+C R++ A
Sbjct: 596 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 655
Query: 270 KELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVV 329
+ +F ++ + +ILI+ CKN +++GA+ ++ M KG KP+ V Y L
Sbjct: 656 ERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDW 715
Query: 330 LFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELD 389
+ +E +FKLF+EMQ G++ +Y IDGLCK + EA +F K D
Sbjct: 716 FSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPD 775
Query: 390 IRAYNCLIDG 399
+ AY LI G
Sbjct: 776 VVAYAILIRG 785
Score = 159 bits (403), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 172/385 (44%), Gaps = 23/385 (5%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V +F L K D LFK + G+ PDL Y+ LI+ + K G + G +
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+ L + V F+S I + A+ ++ ++ G PNV TY LI GL +
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 135 TGHTIVALNLFEEMASGNGEFGVEGFVDKAKELFLQMKDENINPDVVTYTSVIRGFCYAN 194
G A FG+ G Q+ + P +VTY+S+I GFC
Sbjct: 404 DGRIYEA-------------FGMYG----------QILKRGMEPSIVTYSSLIDGFCKCG 440
Query: 195 DWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYN 254
+ L +M+ G P+VV + V++D L K G M A R M+ +R N V+N
Sbjct: 441 NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFN 500
Query: 255 TLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSK 314
+L+DG+C R + A ++F M G V +++ ++ +E AL L+ M
Sbjct: 501 SLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKM 560
Query: 315 GIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEA 374
G++PD + Y TL + + +LFD MQR+ ++AD I L K I +A
Sbjct: 561 GLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDA 620
Query: 375 VELFRTLRILKCELDIRAYNCLIDG 399
+ F L K E DI YN +I G
Sbjct: 621 SKFFNNLIEGKMEPDIVTYNTMICG 645
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 178/373 (47%), Gaps = 13/373 (3%)
Query: 1 FCIFDYMLNMRPSPPPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 60
F +++ M+ M PP V + +L L+K + ++ + ++ +N LI+
Sbjct: 446 FALYEDMIKM-GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 61 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEP 120
+C++ R V + P+ TFT++++ E R+ EA LF ++ G EP
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEP 564
Query: 121 NVFTYNTLINGLYRTGHTIVALNLFEEMASG--NGEFGVEGFV----------DKAKELF 168
+ Y TLI+ + + L LF+ M + + V V + A + F
Sbjct: 565 DALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFF 624
Query: 169 LQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 228
+ + + PD+VTY ++I G+C +EA+ + + PN VT +++ LCKN
Sbjct: 625 NNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKN 684
Query: 229 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTVFSY 288
MD A R+ +M + G +PNA Y LMD F + + + +LF M+ G + ++ SY
Sbjct: 685 NDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSY 744
Query: 289 SILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDEMQR 348
SI+I+G CK ++ A +++ + + + PDVV Y L ++ ++ A L++ M R
Sbjct: 745 SIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLR 804
Query: 349 DGVAADTWTYRTF 361
+GV D R
Sbjct: 805 NGVKPDDLLQRAL 817
Score = 135 bits (340), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 178/418 (42%), Gaps = 55/418 (13%)
Query: 15 PPVCSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 74
P V ++ IL L ++ ++ ++ G+ P + TY+ LI+ FCK G + GF +
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 75 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYR 134
+++ + P+ V + L+ GL + ++ A K+ NV +N+LI+G R
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 135 TGHTIVALNLFEEMASGNGEFGV----------------EGFVDKAKELFLQMKDENINP 178
AL +F M G +G+ EG +++A LF +M + P
Sbjct: 509 LNRFDEALKVFRLM----GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEP 564
Query: 179 DVVTYTSVIRGFCYANDWNEA---------------------------KCLLIE------ 205
D + Y ++I FC KC IE
Sbjct: 565 DALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFF 624
Query: 206 --MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 263
+++ ++P++VT+N ++ C ++DEA R+ +L+ PN L+ C
Sbjct: 625 NNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKN 684
Query: 264 GRVNRAKELFVSMESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIY 323
++ A +F M G +Y L++ + K+ +IEG+ L+ EM KGI P +V Y
Sbjct: 685 NDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSY 744
Query: 324 NTLFVVLFEIHQVERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTL 381
+ + L + +V+ A +F + + D Y I G CK +VEA L+ +
Sbjct: 745 SIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 802
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 162/354 (45%), Gaps = 12/354 (3%)
Query: 58 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKLRVFG 117
L+ C C+ G V + + + ++ L R+ A F KL G
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGG 211
Query: 118 CEPN-VFTYNTLINGLYRTGHTIVALNLFEEMASGNGEFGV-------EGF----VDKAK 165
EP+ V + +++ L+ G AL+ + G+ +G ++ A
Sbjct: 212 IEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVAS 271
Query: 166 ELFLQMKDENINPDVVTYTSVIRGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 225
L + D P+VVT+ ++I GFC + + A L M +G++P+++ ++ ++D
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGY 331
Query: 226 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCTHTV 285
K G + +L + GV+ + V+++ +D + +G + A ++ M G + V
Sbjct: 332 FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNV 391
Query: 286 FSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQVERAFKLFDE 345
+Y+ILI G C++ I A +YG++L +G++P +V Y++L + + F L+++
Sbjct: 392 VTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYED 451
Query: 346 MQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNCLIDG 399
M + G D Y +DGL K ++ A+ + L++ +N LIDG
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 160/364 (43%), Gaps = 66/364 (18%)
Query: 97 LCAESRIMEAAALFTKLRVFGCEPNVFTYNTLINGLYRTGHTIVALNLFEEMASGNG--- 153
L ES A F + G +P ++ T+ + L R G VA +F+EM + G
Sbjct: 77 LSLESEPNSALKYFRWAEISGKDP---SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDF 133
Query: 154 ----------------EFGVE-----GFVDKAKELFL---------------QMKDENIN 177
+F +E G VDKA E+F+ +M + I
Sbjct: 134 NVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIG 193
Query: 178 PDVVT-----YTSVIRG-----------------FCYANDWNEAKCLLIEMMDQGVQPNV 215
D V + + RG FC + +A +M++G + +
Sbjct: 194 SDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFC-KGEVTKALDFHRLVMERGFRVGI 252
Query: 216 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 275
V+ N ++ L + +++ ASRLL L++ G PN + TL++GFC G ++RA +LF
Sbjct: 253 VSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311
Query: 276 MESMGCTHTVFSYSILINGYCKNKEIEGALSLYGEMLSKGIKPDVVIYNTLFVVLFEIHQ 335
ME G + +YS LI+GY K + L+ + L KG+K DVV++++ V +
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 336 VERAFKLFDEMQRDGVAADTWTYRTFIDGLCKNSYIVEAVELFRTLRILKCELDIRAYNC 395
+ A ++ M G++ + TY I GLC++ I EA ++ + E I Y+
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431
Query: 396 LIDG 399
LIDG
Sbjct: 432 LIDG 435
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.142 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 141,449,494
Number of Sequences: 539616
Number of extensions: 5670051
Number of successful extensions: 27616
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 16339
Number of HSP's gapped (non-prelim): 3212
length of query: 400
length of database: 191,569,459
effective HSP length: 120
effective length of query: 280
effective length of database: 126,815,539
effective search space: 35508350920
effective search space used: 35508350920
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 62 (28.5 bits)