Your job contains 1 sequence.
>040370
FFDFSKATAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVP
EISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKD
QRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVI
WDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWKEIL
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040370
(228 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2173542 - symbol:AT5G60940 "AT5G60940" species... 961 1.1e-96 1
UNIPROTKB|Q05048 - symbol:CSTF1 "Cleavage stimulation fac... 577 5.3e-56 1
MGI|MGI:1914587 - symbol:Cstf1 "cleavage stimulation fact... 571 2.3e-55 1
RGD|1309267 - symbol:Cstf1 "cleavage stimulation factor, ... 571 2.3e-55 1
ZFIN|ZDB-GENE-030131-2958 - symbol:cstf1 "cleavage stimul... 547 8.0e-53 1
DICTYBASE|DDB_G0278769 - symbol:cstf1 "cleavage stimulati... 486 2.3e-46 1
WB|WBGene00000773 - symbol:cpf-1 species:6239 "Caenorhabd... 470 1.2e-44 1
FB|FBgn0039867 - symbol:CstF-50 "CstF-50" species:7227 "D... 468 1.9e-44 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 215 1.5e-17 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 209 5.3e-17 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 200 5.1e-16 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 201 6.1e-16 1
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 206 7.9e-16 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 202 8.2e-16 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 200 8.8e-16 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 200 8.8e-16 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 200 8.8e-16 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 200 8.8e-16 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 200 8.8e-16 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 200 1.3e-15 1
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 202 2.7e-15 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 195 5.3e-15 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 195 5.3e-15 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 192 7.3e-15 1
GENEDB_PFALCIPARUM|PFF1000w - symbol:PFF1000w "cleavage s... 196 1.4e-14 1
UNIPROTKB|C6KT45 - symbol:PFF1000w "Cleavage stimulation ... 196 1.4e-14 1
UNIPROTKB|Q5ZIU8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 194 2.4e-14 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 185 4.6e-14 1
UNIPROTKB|E3W9A3 - symbol:KATNB1 "Katanin p80 WD40 repeat... 184 2.9e-13 1
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 171 5.6e-13 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 174 6.8e-13 1
UNIPROTKB|G4MKJ2 - symbol:MGG_04473 "WD repeat containing... 161 8.3e-13 2
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 167 1.5e-12 1
UNIPROTKB|F1P0F4 - symbol:KATNB1 "Katanin p80 WD40 repeat... 176 2.1e-12 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 169 2.6e-12 1
FB|FBgn0038666 - symbol:Smu1 "SMU1 ortholog" species:7227... 171 4.6e-12 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 170 5.3e-12 1
RGD|727868 - symbol:Nsmaf "neutral sphingomyelinase (N-SM... 173 7.0e-12 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 168 8.7e-12 1
MGI|MGI:2442144 - symbol:Taf5 "TAF5 RNA polymerase II, TA... 171 9.5e-12 1
TAIR|locus:2150788 - symbol:AT5G08390 "AT5G08390" species... 171 1.0e-11 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 167 1.2e-11 1
UNIPROTKB|F1S845 - symbol:TAF5 "Uncharacterized protein" ... 167 1.4e-11 1
DICTYBASE|DDB_G0287337 - symbol:taf5 "TFIID subunit" spec... 170 1.5e-11 1
RGD|1311332 - symbol:Taf5 "TAF5 RNA polymerase II, TATA b... 168 2.0e-11 1
UNIPROTKB|Q15542 - symbol:TAF5 "Transcription initiation ... 168 2.0e-11 1
SGD|S000000402 - symbol:TAF5 "Subunit (90 kDa) of TFIID a... 167 2.5e-11 1
UNIPROTKB|E1BEN8 - symbol:TAF5 "Uncharacterized protein" ... 167 2.5e-11 1
UNIPROTKB|E2RE41 - symbol:TAF5 "Uncharacterized protein" ... 167 2.6e-11 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 166 2.9e-11 1
DICTYBASE|DDB_G0289711 - symbol:morg1 "mitogen-activated ... 165 2.9e-11 1
DICTYBASE|DDB_G0289501 - symbol:cdc40 "putative RNA splic... 166 4.2e-11 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 165 5.3e-11 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 165 6.1e-11 1
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 164 6.2e-11 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 164 6.7e-11 1
MGI|MGI:1341864 - symbol:Nsmaf "neutral sphingomyelinase ... 166 7.9e-11 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 164 8.5e-11 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 163 1.1e-10 1
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 163 1.1e-10 1
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 163 1.1e-10 1
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 163 1.1e-10 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 166 1.3e-10 1
DICTYBASE|DDB_G0278353 - symbol:smu1 "suppressor of mec-8... 164 1.4e-10 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 163 1.5e-10 1
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 163 1.6e-10 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 163 1.6e-10 1
RGD|1309198 - symbol:Snrnp40 "small nuclear ribonucleopro... 162 1.7e-10 1
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 162 2.0e-10 1
SGD|S000000653 - symbol:PWP2 "Conserved 90S pre-ribosomal... 165 2.0e-10 1
WB|WBGene00003047 - symbol:lis-1 species:6239 "Caenorhabd... 162 2.2e-10 1
POMBASE|SPBC354.03 - symbol:swd3 "WD repeat protein Swd3"... 152 2.3e-10 2
TAIR|locus:2154438 - symbol:AT5G23430 "AT5G23430" species... 164 2.8e-10 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 163 3.0e-10 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 160 4.1e-10 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 160 5.1e-10 1
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 160 5.9e-10 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 160 6.3e-10 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 160 7.0e-10 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 158 1.0e-09 1
UNIPROTKB|Q5ZME8 - symbol:SMU1 "WD40 repeat-containing pr... 159 1.1e-09 1
UNIPROTKB|Q2TBS9 - symbol:SMU1 "WD40 repeat-containing pr... 159 1.1e-09 1
UNIPROTKB|Q2TAY7 - symbol:SMU1 "WD40 repeat-containing pr... 159 1.1e-09 1
MGI|MGI:1915546 - symbol:Smu1 "smu-1 suppressor of mec-8 ... 159 1.1e-09 1
RGD|620694 - symbol:Smu1 "smu-1 suppressor of mec-8 and u... 159 1.1e-09 1
UNIPROTKB|Q92636 - symbol:NSMAF "Protein FAN" species:960... 161 1.2e-09 1
UNIPROTKB|F1NQ45 - symbol:CDC40 "Uncharacterized protein"... 159 1.4e-09 1
ZFIN|ZDB-GENE-051120-180 - symbol:taf5 "TAF5 RNA polymera... 160 1.5e-09 1
POMBASE|SPAC29E6.01 - symbol:pof11 "F-box protein Pof11" ... 158 1.5e-09 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 157 1.5e-09 1
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 155 1.9e-09 1
UNIPROTKB|E1C4U3 - symbol:E1C4U3 "Uncharacterized protein... 158 2.9e-09 1
CGD|CAL0005939 - symbol:TUP1 species:5476 "Candida albica... 156 3.1e-09 1
UNIPROTKB|P0CY34 - symbol:TUP1 "Transcriptional repressor... 156 3.1e-09 1
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 155 3.7e-09 1
ASPGD|ASPL0000032184 - symbol:AN5196 species:162425 "Emer... 155 4.5e-09 1
POMBASE|SPBC15D4.14 - symbol:taf73 "transcription factor ... 155 6.1e-09 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 152 7.7e-09 1
UNIPROTKB|G4MUR7 - symbol:MGG_08829 "Transcriptional repr... 154 8.0e-09 1
TAIR|locus:2202129 - symbol:AT1G11160 "AT1G11160" species... 156 8.4e-09 1
WARNING: Descriptions of 542 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2173542 [details] [associations]
symbol:AT5G60940 "AT5G60940" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 HSSP:P16649 HOGENOM:HOG000234077
KO:K14406 EMBL:AY084766 EMBL:AF515696 EMBL:AY136384 EMBL:BT000184
IPI:IPI00526744 RefSeq:NP_200902.1 UniGene:At.29134
ProteinModelPortal:Q8L4J2 SMR:Q8L4J2 IntAct:Q8L4J2 STRING:Q8L4J2
PaxDb:Q8L4J2 PRIDE:Q8L4J2 EnsemblPlants:AT5G60940.1 GeneID:836215
KEGG:ath:AT5G60940 TAIR:At5g60940 InParanoid:Q8L4J2 OMA:PWANCIV
PhylomeDB:Q8L4J2 ProtClustDB:CLSN2686712 ArrayExpress:Q8L4J2
Genevestigator:Q8L4J2 Uniprot:Q8L4J2
Length = 429
Score = 961 (343.3 bits), Expect = 1.1e-96, P = 1.1e-96
Identities = 175/226 (77%), Positives = 198/226 (87%)
Query: 1 FFDFSKATAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVP 60
FFDFSK TAKRAF+V QDTHNVRS+SFHPSG+FLLAGTDHPI HLYDVNT+QC+L +N P
Sbjct: 202 FFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFP 261
Query: 61 EISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKD 120
+ V+GAINQVRYSSTG +Y+TASKDGAIRL+DGVSA CVRSI AHG +E TSA FTKD
Sbjct: 262 DSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKD 321
Query: 121 QRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVI 180
QRFVLS GKDSTVKLWE+ SGR+VK+YLGA +LR QA+FNDTEEFV+SIDE SNE+V
Sbjct: 322 QRFVLSSGKDSTVKLWEIGSGRMVKEYLGAKRVKLRSQAIFNDTEEFVISIDEASNEVVT 381
Query: 181 WDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWKE 226
WDA TA+KVAKW SNH GAPRWIEHSP E+ F+TCG DRS+RFWKE
Sbjct: 382 WDARTADKVAKWPSNHNGAPRWIEHSPVESVFVTCGIDRSIRFWKE 427
>UNIPROTKB|Q05048 [details] [associations]
symbol:CSTF1 "Cleavage stimulation factor subunit 1"
species:9606 "Homo sapiens" [GO:0005515 "protein binding"
evidence=IPI] [GO:0003723 "RNA binding" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0006378 "mRNA polyadenylation"
evidence=TAS] [GO:0006379 "mRNA cleavage" evidence=TAS] [GO:0006396
"RNA processing" evidence=TAS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006397 "mRNA processing"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CH471077 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 Reactome:REACT_1675 GO:GO:0006378
GO:GO:0003723 GO:GO:0000398 Pathway_Interaction_DB:bard1pathway
EMBL:AL121914 Reactome:REACT_1788 GO:GO:0006379 GO:GO:0006369
Reactome:REACT_78 EMBL:L02547 EMBL:BT007138 EMBL:AK312774
EMBL:BC001011 EMBL:BC007425 IPI:IPI00011528 PIR:A45142
RefSeq:NP_001028693.1 RefSeq:NP_001028694.1 RefSeq:NP_001315.1
UniGene:Hs.172865 ProteinModelPortal:Q05048 SMR:Q05048
IntAct:Q05048 STRING:Q05048 PhosphoSite:Q05048 DMDM:461848
REPRODUCTION-2DPAGE:IPI00011528 PaxDb:Q05048 PeptideAtlas:Q05048
PRIDE:Q05048 DNASU:1477 Ensembl:ENST00000217109
Ensembl:ENST00000415828 Ensembl:ENST00000452950 GeneID:1477
KEGG:hsa:1477 UCSC:uc002xxl.1 CTD:1477 GeneCards:GC20P054967
H-InvDB:HIX0015931 HGNC:HGNC:2483 HPA:CAB019270 MIM:600369
neXtProt:NX_Q05048 PharmGKB:PA26985 HOGENOM:HOG000234077
HOVERGEN:HBG051144 InParanoid:Q05048 KO:K14406 OMA:LYDHTDE
OrthoDB:EOG4868CD PhylomeDB:Q05048 GenomeRNAi:1477 NextBio:6065
ArrayExpress:Q05048 Bgee:Q05048 CleanEx:HS_CSTF1
Genevestigator:Q05048 GermOnline:ENSG00000101138 Uniprot:Q05048
Length = 431
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 114/226 (50%), Positives = 148/226 (65%)
Query: 2 FDFSKATAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPE 61
FD+SK +AKRAF+ IQ+ +RS+SFHPSGDF+L GT HP LYD+NTFQC++S N P+
Sbjct: 200 FDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVSCN-PQ 258
Query: 62 ISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
AI V Y+S+ MYVT SKDG I+LWDGVS C+ + AH AE SA F+K+
Sbjct: 259 DQHTDAICSVNYNSSANMYVTGSKDGCIKLWDGVSNRCITTFEKAHDGAEVCSAIFSKNS 318
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGA--THTQL-RFQAVFNDTEEFVLSIDEPSNEI 178
+++LS GKDS KLWE+S+GR + +Y GA + Q+ R QAVFN TE++VL DE + +
Sbjct: 319 KYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQVHRTQAVFNHTEDYVLLPDERTISL 378
Query: 179 VIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
WD+ TAE+ S H R I HSP F+TC D RFW
Sbjct: 379 CCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFRARFW 424
>MGI|MGI:1914587 [details] [associations]
symbol:Cstf1 "cleavage stimulation factor, 3' pre-RNA,
subunit 1" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1914587 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0006397 CTD:1477 HOGENOM:HOG000234077 HOVERGEN:HBG051144
KO:K14406 OMA:LYDHTDE OrthoDB:EOG4868CD EMBL:AK011943 EMBL:AK050686
EMBL:AK078667 EMBL:AK145001 EMBL:BC003440 IPI:IPI00116747
RefSeq:NP_077161.1 UniGene:Mm.26944 ProteinModelPortal:Q99LC2
SMR:Q99LC2 STRING:Q99LC2 PhosphoSite:Q99LC2 PaxDb:Q99LC2
PRIDE:Q99LC2 DNASU:67337 Ensembl:ENSMUST00000116375 GeneID:67337
KEGG:mmu:67337 GeneTree:ENSGT00700000104487 InParanoid:Q99LC2
NextBio:324286 Bgee:Q99LC2 Genevestigator:Q99LC2
GermOnline:ENSMUSG00000027498 Uniprot:Q99LC2
Length = 431
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 112/226 (49%), Positives = 147/226 (65%)
Query: 2 FDFSKATAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPE 61
FD+SK +AKRAF+ IQ+ +RS+SFHPSGDF+L GT HP LYD+NTFQC++S N P+
Sbjct: 200 FDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVSCN-PQ 258
Query: 62 ISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
AI V Y+ + MYVT SKDG I+LWDGVS C+ + AH AE SA F+K+
Sbjct: 259 DQHTDAICSVNYNPSANMYVTGSKDGCIKLWDGVSNRCITTFEKAHDGAEVCSAIFSKNS 318
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGA--THTQL-RFQAVFNDTEEFVLSIDEPSNEI 178
+++LS GKDS KLWE+S+GR + +Y GA + Q+ R QAVFN TE+++L DE + +
Sbjct: 319 KYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQVHRTQAVFNHTEDYILLPDERTISL 378
Query: 179 VIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
WD+ TAE+ S H R I HSP F+TC D RFW
Sbjct: 379 CCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFRARFW 424
>RGD|1309267 [details] [associations]
symbol:Cstf1 "cleavage stimulation factor, 3' pre-RNA, subunit
1, 50kDa" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1309267 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006397
CTD:1477 HOGENOM:HOG000234077 HOVERGEN:HBG051144 KO:K14406
OMA:LYDHTDE OrthoDB:EOG4868CD GeneTree:ENSGT00700000104487
EMBL:BC091381 IPI:IPI00365055 RefSeq:NP_001013179.1 UniGene:Rn.8860
ProteinModelPortal:Q5BJQ6 SMR:Q5BJQ6 STRING:Q5BJQ6 PRIDE:Q5BJQ6
Ensembl:ENSRNOT00000055101 GeneID:311670 KEGG:rno:311670
InParanoid:Q5BJQ6 NextBio:664016 Genevestigator:Q5BJQ6
GermOnline:ENSRNOG00000004775 Uniprot:Q5BJQ6
Length = 431
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 112/226 (49%), Positives = 147/226 (65%)
Query: 2 FDFSKATAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPE 61
FD+SK +AKRAF+ IQ+ +RS+SFHPSGDF+L GT HP LYD+NTFQC++S N P+
Sbjct: 200 FDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVSCN-PQ 258
Query: 62 ISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
AI V Y+ + MYVT SKDG I+LWDGVS C+ + AH AE SA F+K+
Sbjct: 259 DQHTDAICSVNYNPSANMYVTGSKDGCIKLWDGVSNRCITTFEKAHDGAEVCSAIFSKNS 318
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGA--THTQL-RFQAVFNDTEEFVLSIDEPSNEI 178
+++LS GKDS KLWE+S+GR + +Y GA + Q+ R QAVFN TE+++L DE + +
Sbjct: 319 KYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQVHRTQAVFNHTEDYILLPDERTISL 378
Query: 179 VIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
WD+ TAE+ S H R I HSP F+TC D RFW
Sbjct: 379 CCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFRARFW 424
>ZFIN|ZDB-GENE-030131-2958 [details] [associations]
symbol:cstf1 "cleavage stimulation factor, 3'
pre-RNA, subunit 1" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-2958 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
HOGENOM:HOG000234077 HOVERGEN:HBG051144 EMBL:BC066520
IPI:IPI00481543 UniGene:Dr.78498 ProteinModelPortal:Q6NYN6
STRING:Q6NYN6 PRIDE:Q6NYN6 InParanoid:Q6NYN6 ArrayExpress:Q6NYN6
Bgee:Q6NYN6 Uniprot:Q6NYN6
Length = 431
Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
Identities = 112/226 (49%), Positives = 143/226 (63%)
Query: 2 FDFSKATAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPE 61
FD+SK +AKRAF+ +Q+ +RS+SFHPSGDFLL GT HP LYDVNTFQC++S N P
Sbjct: 200 FDYSKPSAKRAFKHVQEAEMLRSISFHPSGDFLLVGTQHPTLRLYDVNTFQCFVSCN-PL 258
Query: 62 ISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
I V Y+ + YVT SKDG+I+LWDGVS CV + AH AE SA F+K+
Sbjct: 259 DQHTDTICGVCYNPSANSYVTCSKDGSIKLWDGVSNRCVTTFDKAHEGAEVCSAVFSKNS 318
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGA--THTQL-RFQAVFNDTEEFVLSIDEPSNEI 178
+++LS GKDS KLWE+S+GR + +Y GA + Q R Q VFN TE++VL DE + +
Sbjct: 319 KYILSTGKDSVAKLWEISTGRTLVKYTGAGLSGRQTHRTQGVFNHTEDYVLLPDERTISL 378
Query: 179 VIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
WD+ TAE+ S H R I HSP F+TC D RFW
Sbjct: 379 CCWDSRTAERKNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFRARFW 424
Score = 117 (46.2 bits), Expect = 0.00017, P = 0.00017
Identities = 40/184 (21%), Positives = 78/184 (42%)
Query: 14 RVIQD-THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLS-ANVPEISVNGAINQV 71
R + D V +SFHP+ L +G+ L+D + + +V E + + +
Sbjct: 167 RTLYDHVDEVTCLSFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKHVQEAEM---LRSI 223
Query: 72 RYSSTGGMYVTASKDGAIRLWDGVSANCVRSI--VGAHGTAEATSANFTKDQRFVLSCGK 129
+ +G + ++ +RL+D + C S + H T + ++C K
Sbjct: 224 SFHPSGDFLLVGTQHPTLRLYDVNTFQCFVSCNPLDQH-TDTICGVCYNPSANSYVTCSK 282
Query: 130 DSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKV 189
D ++KLW+ S R V + A AVF+ +++LS + S +W+ T +
Sbjct: 283 DGSIKLWDGVSNRCVTTFDKAHEGAEVCSAVFSKNSKYILSTGKDS-VAKLWEISTGRTL 341
Query: 190 AKWS 193
K++
Sbjct: 342 VKYT 345
>DICTYBASE|DDB_G0278769 [details] [associations]
symbol:cstf1 "cleavage stimulation factor 50 kDa
subunit" species:44689 "Dictyostelium discoideum" [GO:0006396 "RNA
processing" evidence=ISS] [GO:0006379 "mRNA cleavage" evidence=ISS]
[GO:0006378 "mRNA polyadenylation" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0278769 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006378 GO:GO:0003723 EMBL:AAFI02000024
GO:GO:0006379 KO:K14406 OMA:TKFITTH RefSeq:XP_641951.1
ProteinModelPortal:Q54XS9 EnsemblProtists:DDB0233705 GeneID:8621683
KEGG:ddi:DDB_G0278769 InParanoid:Q54XS9 ProtClustDB:CLSZ2729098
Uniprot:Q54XS9
Length = 506
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 92/231 (39%), Positives = 148/231 (64%)
Query: 1 FFDFSKATAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVP 60
F+D+ K++ KR+F+ IQDTH +RS++FHP GD +LAGTDH + LY+VNTFQ + + +
Sbjct: 255 FYDY-KSSLKRSFKYIQDTHGIRSINFHPCGDLILAGTDHQMIRLYNVNTFQSFTARKIN 313
Query: 61 EISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKD 120
E +G INQVR+S G ++ + SKD I++WD + + + ++ HG E T+ +++
Sbjct: 314 EHH-HGPINQVRFSLDGNIFASCSKDNTIKIWDSNNFSLISTLNSPHGGKEPTTVQISRN 372
Query: 121 QRFVLSCGKDSTVKLWEVSSGRLVKQY-LGATHT----QLRFQAVFNDTEEFVLSIDEPS 175
Q+++LSCG+DS +KLWE++SGRL+ G + + R A FN TE+++++ DE
Sbjct: 373 QKYLLSCGRDSMIKLWEITSGRLIYSINTGVNQSGGQNKNRISATFNYTEDYIITNDEQP 432
Query: 176 NEIVIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWKE 226
+ V++++ T E+V K + H R+I SP E A +TC D RFW +
Sbjct: 433 SVAVVYNSRTKEQVQKLTG-HNNTVRYIAASPVENALMTCSLDHRGRFWTD 482
Score = 114 (45.2 bits), Expect = 0.00047, P = 0.00047
Identities = 37/179 (20%), Positives = 71/179 (39%)
Query: 7 ATAKRAFRVIQD-THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVN 65
A ++ R D T + + FHPS L + + YD ++ L + I
Sbjct: 216 APSRPVIRTFYDHTMPINDLDFHPSAPILSSASKDGTIRFYD---YKSSLKRSFKYIQDT 272
Query: 66 GAINQVRYSSTGGMYVTASKDGAIRLWD-GVSANCVRSIVGAHGTAEATSANFTKDQRFV 124
I + + G + + + IRL++ + + H F+ D
Sbjct: 273 HGIRSINFHPCGDLILAGTDHQMIRLYNVNTFQSFTARKINEHHHGPINQVRFSLDGNIF 332
Query: 125 LSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAV-FNDTEEFVLSIDEPSNEIVIWD 182
SC KD+T+K+W+ ++ L+ L + H V + ++++LS S I +W+
Sbjct: 333 ASCSKDNTIKIWDSNNFSLIST-LNSPHGGKEPTTVQISRNQKYLLSCGRDSM-IKLWE 389
Score = 112 (44.5 bits), Expect = 0.00081, P = 0.00081
Identities = 38/164 (23%), Positives = 71/164 (43%)
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
IN + + + + +ASKDG IR +D ++ RS T S NF +L+
Sbjct: 232 INDLDFHPSAPILSSASKDGTIRFYD-YKSSLKRSFKYIQDTHGIRSINFHPCGDLILAG 290
Query: 128 GKDSTVKLWEVSS-----GRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWD 182
++L+ V++ R + ++ Q+RF N + + N I IWD
Sbjct: 291 TDHQMIRLYNVNTFQSFTARKINEHHHGPINQVRFSLDGN-----IFASCSKDNTIKIWD 345
Query: 183 ALTAEKVAKWSSNHIGA-PRWIEHSPAEAAFITCGTDRSVRFWK 225
+ ++ +S H G P ++ S + ++CG D ++ W+
Sbjct: 346 SNNFSLISTLNSPHGGKEPTTVQISRNQKYLLSCGRDSMIKLWE 389
>WB|WBGene00000773 [details] [associations]
symbol:cpf-1 species:6239 "Caenorhabditis elegans"
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0040010 "positive regulation
of growth rate" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0040027 HOGENOM:HOG000234077 KO:K14406
GeneTree:ENSGT00700000104487 GO:GO:0001703 EMBL:Z68315 PIR:T21482
RefSeq:NP_495822.1 ProteinModelPortal:Q19864 SMR:Q19864
STRING:Q19864 PaxDb:Q19864 EnsemblMetazoa:F28C6.3 GeneID:174378
KEGG:cel:CELE_F28C6.3 UCSC:F28C6.3 CTD:174378 WormBase:F28C6.3
InParanoid:Q19864 OMA:TKFITTH NextBio:883778 Uniprot:Q19864
Length = 430
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 95/226 (42%), Positives = 132/226 (58%)
Query: 2 FDFSKATAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPE 61
FDFSK K+A + + + + VR++S HP G+FLL TDHP LY++ T Q Y SAN P+
Sbjct: 197 FDFSKTAVKKAMKTLSEVYPVRALSCHPGGEFLLVATDHPTVRLYNIETAQAYASAN-PD 255
Query: 62 ISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
++ V YS +YVTASKDG +++WDGVS CV + AH + SA FTK+
Sbjct: 256 DQHTESVTDVHYSENARLYVTASKDGHVKIWDGVSNRCVETFKRAHDGSSICSAKFTKNG 315
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLR-F--QAVFNDTEEFVLSIDEPSNEI 178
+++L+ G DS VKLWE+S+ R + Y GA T + F A FN E++VL DE S +
Sbjct: 316 KYILTSGMDSIVKLWELSTNRCLIVYTGAGATGAQDFATNASFNHNEDYVLFPDEKSGSM 375
Query: 179 VIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
WDA +++ + H A R HSP+ AF+T D RFW
Sbjct: 376 CSWDARNSDRKRLLALGHTSACRTFVHSPSMPAFMTGSDDHRARFW 421
>FB|FBgn0039867 [details] [associations]
symbol:CstF-50 "CstF-50" species:7227 "Drosophila
melanogaster" [GO:0005848 "mRNA cleavage stimulating factor
complex" evidence=ISS] [GO:0006379 "mRNA cleavage" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006379 KO:K14406
OMA:LYDHTDE GeneTree:ENSGT00700000104487 HSSP:P46680 GO:GO:0005848
FlyBase:FBgn0039867 NextBio:835499 EMBL:AY094802 RefSeq:NP_651883.1
UniGene:Dm.11654 SMR:Q9V9V0 IntAct:Q9V9V0 MINT:MINT-287008
STRING:Q9V9V0 EnsemblMetazoa:FBtr0085865 GeneID:43734
KEGG:dme:Dmel_CG2261 UCSC:CG2261-RA CTD:43734 InParanoid:Q9V9V0
GenomeRNAi:43734 Uniprot:Q9V9V0
Length = 424
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 91/226 (40%), Positives = 135/226 (59%)
Query: 2 FDFSKATAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPE 61
FD +K + K+A +V D V +SFHP+GD++ GT+H + +YDV T QC++SA +P
Sbjct: 193 FDIAKPSVKKAHKVFTDCEPVLCLSFHPTGDYVAIGTEHNVLRVYDVATTQCFVSA-IPS 251
Query: 62 ISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
+ V+YS TG +Y T S DG I++WDG+S C+ +I AHG A S FT++
Sbjct: 252 QQHKAGVTCVKYSPTGKLYATGSYDGDIKIWDGISGRCINTIAEAHGGAAICSLEFTRNG 311
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGATHT---QLRFQAVFNDTEEFVLSIDEPSNEI 178
+++LS G DS V LWE+ + R ++ Y GA T + + +AVFN TE++VL DE + +
Sbjct: 312 KYLLSSGMDSLVYLWELCTSRPIQTYTGAGTTGKQEHQTEAVFNHTEDYVLFPDEATTSL 371
Query: 179 VIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
W++ ++ S H G R+I HSP AF+TC D RFW
Sbjct: 372 CSWNSRNGCRLTLNSLGHNGPVRYITHSPNGPAFLTCSDDFRARFW 417
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 215 (80.7 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 52/211 (24%), Positives = 106/211 (50%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T+ V V+F+P + +++G+ +++V T +C + I+ V ++ G
Sbjct: 128 TNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMP----ISSVHFNRDGS 183
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
+ V+AS DG+ ++WD C+++++ A + A F+ + +F+L DST+KL
Sbjct: 184 LIVSASHDGSCKIWDAKEGTCLKTLIDDKSPA-VSFAKFSPNGKFILVATLDSTLKLSNY 242
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTE-EFVLSIDEPSNEIVIWDALTAEKVAKWSSNHI 197
++G+ +K Y G T+ + F+ T ++++S E N + +WD L A + + H
Sbjct: 243 ATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSE-DNCVYLWD-LQARNILQRLEGHT 300
Query: 198 GAPRWIEHSPAEAAFITCGT--DRSVRFWKE 226
A + P + + G D+++R WK+
Sbjct: 301 DAVISVSCHPVQNEISSSGNHLDKTIRIWKQ 331
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 52/213 (24%), Positives = 107/213 (50%)
Query: 15 VIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYS 74
+I T+ V+F+P + +++G+ ++DV T +C L +P S + V ++
Sbjct: 109 LIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKC-LKV-LPAHS--DPVTAVDFN 164
Query: 75 STGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVK 134
G + V++S DG R+WD + +CV++++ + F+ + +F+L D+T++
Sbjct: 165 RDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPP-VSFVRFSPNGKFILVGTLDNTLR 223
Query: 135 LWEVSSGRLVKQYLGATHTQLRFQAVFNDTE-EFVLSIDEPSNEIVIWDALTAEKVAKWS 193
LW +SS + +K Y G + Q + F+ T + ++S E N + +W+ L ++K+ +
Sbjct: 224 LWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSE-DNCVHMWE-LNSKKLLQKL 281
Query: 194 SNHIGAPRWIEHSPAEAAFITCGTDRSVRFWKE 226
H + P E + D++VR W +
Sbjct: 282 EGHTETVMNVACHPTENLIASGSLDKTVRIWTQ 314
Score = 187 (70.9 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 60/211 (28%), Positives = 97/211 (45%)
Query: 19 THN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEIS--VNGAINQVRYS 74
+HN V SV F G L + + Y +NT ++ V E + NG I+ V +S
Sbjct: 22 SHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENG-ISDVAFS 80
Query: 75 STGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVK 134
S V+AS D ++LWD + + +++++G H T A NF ++S D TV+
Sbjct: 81 SDARFIVSASDDKTLKLWDVETGSLIKTLIG-H-TNYAFCVNFNPQSNMIVSGSFDETVR 138
Query: 135 LWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSS 194
+W+V++G+ +K L A H+ FN ++S IWD+ T V
Sbjct: 139 IWDVTTGKCLK-VLPA-HSDPVTAVDFNRDGSLIVS-SSYDGLCRIWDSGTGHCVKTLID 195
Query: 195 NHIGAPRWIEHSPAEAAFITCGT-DRSVRFW 224
+ ++ SP FI GT D ++R W
Sbjct: 196 DENPPVSFVRFSP-NGKFILVGTLDNTLRLW 225
Score = 159 (61.0 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 45/209 (21%), Positives = 93/209 (44%)
Query: 20 HNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGM 79
+ + V+F F+++ +D L+DV T + + + +N ++ M
Sbjct: 72 NGISDVAFSSDARFIVSASDDKTLKLWDVETGSL-IKTLIGHTNYAFCVN---FNPQSNM 127
Query: 80 YVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVS 139
V+ S D +R+WD + C++ ++ AH T+ +F +D ++S D ++W+
Sbjct: 128 IVSGSFDETVRIWDVTTGKCLK-VLPAHSDP-VTAVDFNRDGSLIVSSSYDGLCRIWDSG 185
Query: 140 SGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGA 199
+G VK + + + F F+ +F+L + N + +W+ +++ K K + H+ A
Sbjct: 186 TGHCVKTLIDDENPPVSFVR-FSPNGKFIL-VGTLDNTLRLWN-ISSAKFLKTYTGHVNA 242
Query: 200 PRWIEH--SPAEAAFITCGT-DRSVRFWK 225
I S I G+ D V W+
Sbjct: 243 QYCISSAFSVTNGKRIVSGSEDNCVHMWE 271
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 200 (75.5 bits), Expect = 5.1e-16, P = 5.1e-16
Identities = 50/203 (24%), Positives = 101/203 (49%)
Query: 26 SFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTASK 85
+F+P + +++G+ ++DV T +C + +P S ++ V ++ G + V++S
Sbjct: 110 NFNPQSNLIVSGSFDESVRIWDVKTGKCLKT--LPAHS--DPVSAVHFNRDGSLIVSSSY 165
Query: 86 DGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVK 145
DG R+WD S C+++++ + F+ + +++L+ D+T+KLW+ S G+ +K
Sbjct: 166 DGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK 224
Query: 146 QYLGATHTQLRFQAVFNDTE-EFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIE 204
Y G + + A F+ T ++++S E N + IW+ T E V K H
Sbjct: 225 TYTGHKNEKYCIFANFSVTGGKWIVSGSE-DNLVYIWNLQTKEIVQKLQG-HTDVVISTA 282
Query: 205 HSPAEAAFITCG--TDRSVRFWK 225
P E + D++++ WK
Sbjct: 283 CHPTENIIASAALENDKTIKLWK 305
Score = 150 (57.9 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 50/215 (23%), Positives = 94/215 (43%)
Query: 13 FRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHL---YDVNTFQCYLSANVPEISVNGAIN 69
F + T V SV F P+G++L + + + + YD F+ +S + IS
Sbjct: 13 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKLGIS------ 65
Query: 70 QVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGK 129
V +SS + V+AS D +++WD S C++++ G H NF ++S
Sbjct: 66 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKG-HSNY-VFCCNFNPQSNLIVSGSF 123
Query: 130 DSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKV 189
D +V++W+V +G+ +K L A H+ FN ++S IWD + + +
Sbjct: 124 DESVRIWDVKTGKCLKT-LPA-HSDPVSAVHFNRDGSLIVS-SSYDGLCRIWDTASGQCL 180
Query: 190 AKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+ +++ SP + D +++ W
Sbjct: 181 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 215
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 201 (75.8 bits), Expect = 6.1e-16, P = 6.1e-16
Identities = 50/168 (29%), Positives = 90/168 (53%)
Query: 27 FHPSGDFLLAGTDHPIAHLYDVNTFQCY--LSANVPEISVNGAINQVRYSSTGGMYVTAS 84
F+P + +++G+ +++V T +C LSA+ IS A+N ++ G + V+ S
Sbjct: 131 FNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPIS---AVN---FNCNGSLIVSGS 184
Query: 85 KDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLV 144
DG R+WD S C+R++ G + F+ + +++L+ D+T+KLW+ S GR +
Sbjct: 185 YDGLCRIWDAASGQCLRTLAD-EGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCL 243
Query: 145 KQYLGATHTQLRFQAVFNDT-EEFVLSIDEPSNEIVIWDALTAEKVAK 191
K Y G + + A F+ T ++V+S E N + IW+ T E V +
Sbjct: 244 KTYTGHKNEKYCLFASFSVTGRKWVVSGSE-DNMVYIWNLQTKEIVQR 290
Score = 151 (58.2 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 49/215 (22%), Positives = 93/215 (43%)
Query: 12 AFRVIQDTHN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAIN 69
A R+ H+ + SV F P+G++L + + ++ C + + I+
Sbjct: 30 ALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLE----IS 85
Query: 70 QVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGK 129
V +SS V+AS D +++WD S C++++ G H +F ++S
Sbjct: 86 DVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKG-HSDF-VFCCDFNPPSNLIVSGSF 143
Query: 130 DSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKV 189
D +VK+WEV +G+ +K L A H+ FN ++S IWDA + + +
Sbjct: 144 DESVKIWEVKTGKCLKT-LSA-HSDPISAVNFNCNGSLIVS-GSYDGLCRIWDAASGQCL 200
Query: 190 AKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+ +++ SP +T D +++ W
Sbjct: 201 RTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLW 235
Score = 142 (55.0 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 42/176 (23%), Positives = 86/176 (48%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
+ +V+F+ +G +++G+ + ++D + QC L E N ++ V++S G +
Sbjct: 168 ISAVNFNCNGSLIVSGSYDGLCRIWDAASGQC-LRTLADE--GNPPVSFVKFSPNGKYIL 224
Query: 82 TASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFT-KDQRFVLSCGKDSTVKLWEVSS 140
TA+ D ++LWD C+++ G A+F+ +++V+S +D+ V +W + +
Sbjct: 225 TATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQT 284
Query: 141 GRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAK-WSSN 195
+V++ G HT + A + T+ + S AL +K K WSS+
Sbjct: 285 KEIVQRLQG--HTDVVISAACHPTKNIIASA-----------ALENDKTIKVWSSD 327
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 206 (77.6 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 57/220 (25%), Positives = 104/220 (47%)
Query: 20 HN-VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
HN V +++F P G+ L++G+ L+DV + + S V+G V + T
Sbjct: 261 HNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGI--DVVWDGT-- 316
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
+ + + DG +R+WD + C+R++V +S F+ + ++VL+ D V+LW+
Sbjct: 317 LIASCATDGLVRIWDTSTGQCLRTLVH-EDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDY 375
Query: 139 SSGRLVKQYLGATHTQLRFQAVFN--------DTEEFVLSID-EPSNEIVIWDALTAEKV 189
GR +K Y G ++ + F T + ++ I+ WD +T +KV
Sbjct: 376 VEGRCLKTYQGHSNKKYSLSGAFGVYGQSIPGRTPGYAFAVSGSEDGAILCWDVVT-KKV 434
Query: 190 AKWSSNHIGAPRWIEH-SPAEAAF-ITCGTDRSVRFWKEI 227
+ H G ++ S E F ++CG D +VR W+E+
Sbjct: 435 LQRIEAHDGVVLGVDTCSTGEGRFMVSCGLDGTVRVWEEV 474
Score = 151 (58.2 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 45/144 (31%), Positives = 66/144 (45%)
Query: 2 FDFSKATAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQC---YLSAN 58
+D S R V +D V SV F P+G ++LA T L+D +C Y +
Sbjct: 330 WDTSTGQCLRTL-VHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHS 388
Query: 59 VPEISVNGAINQVRYSSTG-----GMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEAT 113
+ S++GA S G V+ S+DGAI WD V+ ++ I G
Sbjct: 389 NKKYSLSGAFGVYGQSIPGRTPGYAFAVSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGV 448
Query: 114 SANFTKDQRFVLSCGKDSTVKLWE 137
T + RF++SCG D TV++WE
Sbjct: 449 DTCSTGEGRFMVSCGLDGTVRVWE 472
Score = 142 (55.0 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 41/181 (22%), Positives = 87/181 (48%)
Query: 4 FSKATAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEIS 63
++ +T K + + ++S+ P G + +G+D L++V T + + + P I
Sbjct: 203 WAASTGKLIYTFEGHLAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPT---PFIG 259
Query: 64 VNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRF 123
+ + + +S G M V+ S D A+ LWD SA ++S+ AH + + D
Sbjct: 260 HHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLP-AHSDP-VSGIDVVWDGTL 317
Query: 124 VLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLS--IDEPSNEIVIW 181
+ SC D V++W+ S+G+ ++ + + + F+ ++VL+ +D+ + +W
Sbjct: 318 IASCATDGLVRIWDTSTGQCLRTLVHEDNPPVS-SVKFSPNGKYVLAWTLDDC---VRLW 373
Query: 182 D 182
D
Sbjct: 374 D 374
Score = 122 (48.0 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 36/158 (22%), Positives = 68/158 (43%)
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
++ VR+S M + DGA+++W + + + G H A ++ +++ D + S
Sbjct: 179 VSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEG-H-LAGISTISWSPDGATIASG 236
Query: 128 GKDSTVKLWEVSSGRL-VKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTA 186
D T++LW V +G+ ++G H + F+ ++S + +WD +A
Sbjct: 237 SDDKTIRLWNVLTGKAHPTPFIG--HHNYVYAIAFSPKGNMLVS-GSYDEAVFLWDVRSA 293
Query: 187 EKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+V K H I+ +C TD VR W
Sbjct: 294 -RVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIW 330
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 202 (76.2 bits), Expect = 8.2e-16, P = 8.2e-16
Identities = 57/222 (25%), Positives = 107/222 (48%)
Query: 8 TAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGA 67
T K A + T+ V +F+P +++G+ ++DV T C + +P S
Sbjct: 152 TVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKT--LPAHS--DP 207
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
++ V ++ G + + S DG +R+WD + CV+++V A F+ + +++LS
Sbjct: 208 VSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAF-VKFSPNGKYILSS 266
Query: 128 GKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTE-EFVLSIDEPSNEIVIWDALTA 186
D+T+KLW+ G+ +KQY G + + A F+ T ++++S E +I +W+ T
Sbjct: 267 NLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDC-KIYVWNLQTK 325
Query: 187 EKVAKWSSNHIGAPRWIEHSPAEAAFITCGT---DRSVRFWK 225
E V + H A + P + I G D ++R W+
Sbjct: 326 E-VVQSLEGHTQAVIASDCHPMQN-MIASGALEPDNTIRIWR 365
Score = 135 (52.6 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 44/161 (27%), Positives = 75/161 (46%)
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLS 126
+I+ V++S G T+S D +++W+ +C R++ G H A ++ D + +++
Sbjct: 81 SISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTG-HKLGVNDFA-WSADSKSIVT 138
Query: 127 CGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLS--IDEPSNEIVIWDAL 184
D T+K++EV + ++ K G HT F FN V+S DE + IWD
Sbjct: 139 ASDDKTLKIYEVPTVKMAKTLKG--HTNYVFCCNFNPQSSLVVSGSFDE---SVRIWDVR 193
Query: 185 TAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGT-DRSVRFW 224
T V K H + + + + IT G+ D VR W
Sbjct: 194 TGMCV-KTLPAHSDPVSAVSFN-RDGSLITSGSYDGLVRIW 232
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 200 (75.5 bits), Expect = 8.8e-16, P = 8.8e-16
Identities = 50/203 (24%), Positives = 101/203 (49%)
Query: 26 SFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTASK 85
+F+P + +++G+ ++DV T +C + +P S ++ V ++ G + V++S
Sbjct: 136 NFNPQSNLIVSGSFDESVRIWDVKTGKCLKT--LPAHS--DPVSAVHFNRDGSLIVSSSY 191
Query: 86 DGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVK 145
DG R+WD S C+++++ + F+ + +++L+ D+T+KLW+ S G+ +K
Sbjct: 192 DGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK 250
Query: 146 QYLGATHTQLRFQAVFNDTE-EFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIE 204
Y G + + A F+ T ++++S E N + IW+ T E V K H
Sbjct: 251 TYTGHKNEKYCIFANFSVTGGKWIVSGSE-DNLVYIWNLQTKEIVQKLQG-HTDVVISTA 308
Query: 205 HSPAEAAFITCG--TDRSVRFWK 225
P E + D++++ WK
Sbjct: 309 CHPTENIIASAALENDKTIKLWK 331
Score = 150 (57.9 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 50/215 (23%), Positives = 94/215 (43%)
Query: 13 FRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHL---YDVNTFQCYLSANVPEISVNGAIN 69
F + T V SV F P+G++L + + + + YD F+ +S + IS
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKLGIS------ 91
Query: 70 QVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGK 129
V +SS + V+AS D +++WD S C++++ G H NF ++S
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKG-HSNY-VFCCNFNPQSNLIVSGSF 149
Query: 130 DSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKV 189
D +V++W+V +G+ +K L A H+ FN ++S IWD + + +
Sbjct: 150 DESVRIWDVKTGKCLKT-LPA-HSDPVSAVHFNRDGSLIVS-SSYDGLCRIWDTASGQCL 206
Query: 190 AKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+ +++ SP + D +++ W
Sbjct: 207 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 241
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 200 (75.5 bits), Expect = 8.8e-16, P = 8.8e-16
Identities = 50/203 (24%), Positives = 101/203 (49%)
Query: 26 SFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTASK 85
+F+P + +++G+ ++DV T +C + +P S ++ V ++ G + V++S
Sbjct: 136 NFNPQSNLIVSGSFDESVRIWDVKTGKCLKT--LPAHS--DPVSAVHFNRDGSLIVSSSY 191
Query: 86 DGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVK 145
DG R+WD S C+++++ + F+ + +++L+ D+T+KLW+ S G+ +K
Sbjct: 192 DGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK 250
Query: 146 QYLGATHTQLRFQAVFNDTE-EFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIE 204
Y G + + A F+ T ++++S E N + IW+ T E V K H
Sbjct: 251 TYTGHKNEKYCIFANFSVTGGKWIVSGSE-DNLVYIWNLQTKEIVQKLQG-HTDVVISTA 308
Query: 205 HSPAEAAFITCG--TDRSVRFWK 225
P E + D++++ WK
Sbjct: 309 CHPTENIIASAALENDKTIKLWK 331
Score = 150 (57.9 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 50/215 (23%), Positives = 94/215 (43%)
Query: 13 FRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHL---YDVNTFQCYLSANVPEISVNGAIN 69
F + T V SV F P+G++L + + + + YD F+ +S + IS
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKLGIS------ 91
Query: 70 QVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGK 129
V +SS + V+AS D +++WD S C++++ G H NF ++S
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKG-HSNY-VFCCNFNPQSNLIVSGSF 149
Query: 130 DSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKV 189
D +V++W+V +G+ +K L A H+ FN ++S IWD + + +
Sbjct: 150 DESVRIWDVKTGKCLKT-LPA-HSDPVSAVHFNRDGSLIVS-SSYDGLCRIWDTASGQCL 206
Query: 190 AKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+ +++ SP + D +++ W
Sbjct: 207 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 241
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 200 (75.5 bits), Expect = 8.8e-16, P = 8.8e-16
Identities = 50/203 (24%), Positives = 101/203 (49%)
Query: 26 SFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTASK 85
+F+P + +++G+ ++DV T +C + +P S ++ V ++ G + V++S
Sbjct: 136 NFNPQSNLIVSGSFDESVRIWDVKTGKCLKT--LPAHS--DPVSAVHFNRDGSLIVSSSY 191
Query: 86 DGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVK 145
DG R+WD S C+++++ + F+ + +++L+ D+T+KLW+ S G+ +K
Sbjct: 192 DGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK 250
Query: 146 QYLGATHTQLRFQAVFNDTE-EFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIE 204
Y G + + A F+ T ++++S E N + IW+ T E V K H
Sbjct: 251 TYTGHKNEKYCIFANFSVTGGKWIVSGSE-DNLVYIWNLQTKEIVQKLQG-HTDVVISTA 308
Query: 205 HSPAEAAFITCG--TDRSVRFWK 225
P E + D++++ WK
Sbjct: 309 CHPTENIIASAALENDKTIKLWK 331
Score = 150 (57.9 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 50/215 (23%), Positives = 94/215 (43%)
Query: 13 FRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHL---YDVNTFQCYLSANVPEISVNGAIN 69
F + T V SV F P+G++L + + + + YD F+ +S + IS
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKLGIS------ 91
Query: 70 QVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGK 129
V +SS + V+AS D +++WD S C++++ G H NF ++S
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKG-HSNY-VFCCNFNPQSNLIVSGSF 149
Query: 130 DSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKV 189
D +V++W+V +G+ +K L A H+ FN ++S IWD + + +
Sbjct: 150 DESVRIWDVKTGKCLKT-LPA-HSDPVSAVHFNRDGSLIVS-SSYDGLCRIWDTASGQCL 206
Query: 190 AKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+ +++ SP + D +++ W
Sbjct: 207 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 241
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 200 (75.5 bits), Expect = 8.8e-16, P = 8.8e-16
Identities = 50/203 (24%), Positives = 101/203 (49%)
Query: 26 SFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTASK 85
+F+P + +++G+ ++DV T +C + +P S ++ V ++ G + V++S
Sbjct: 136 NFNPQSNLIVSGSFDESVRIWDVKTGKCLKT--LPAHS--DPVSAVHFNRDGSLIVSSSY 191
Query: 86 DGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVK 145
DG R+WD S C+++++ + F+ + +++L+ D+T+KLW+ S G+ +K
Sbjct: 192 DGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK 250
Query: 146 QYLGATHTQLRFQAVFNDTE-EFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIE 204
Y G + + A F+ T ++++S E N + IW+ T E V K H
Sbjct: 251 TYTGHKNEKYCIFANFSVTGGKWIVSGSE-DNLVYIWNLQTKEIVQKLQG-HTDVVISTA 308
Query: 205 HSPAEAAFITCG--TDRSVRFWK 225
P E + D++++ WK
Sbjct: 309 CHPTENIIASAALENDKTIKLWK 331
Score = 150 (57.9 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 50/215 (23%), Positives = 94/215 (43%)
Query: 13 FRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHL---YDVNTFQCYLSANVPEISVNGAIN 69
F + T V SV F P+G++L + + + + YD F+ +S + IS
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKLGIS------ 91
Query: 70 QVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGK 129
V +SS + V+AS D +++WD S C++++ G H NF ++S
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKG-HSNY-VFCCNFNPQSNLIVSGSF 149
Query: 130 DSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKV 189
D +V++W+V +G+ +K L A H+ FN ++S IWD + + +
Sbjct: 150 DESVRIWDVKTGKCLKT-LPA-HSDPVSAVHFNRDGSLIVS-SSYDGLCRIWDTASGQCL 206
Query: 190 AKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+ +++ SP + D +++ W
Sbjct: 207 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 241
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 200 (75.5 bits), Expect = 8.8e-16, P = 8.8e-16
Identities = 50/203 (24%), Positives = 101/203 (49%)
Query: 26 SFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTASK 85
+F+P + +++G+ ++DV T +C + +P S ++ V ++ G + V++S
Sbjct: 136 NFNPQSNLIVSGSFDESVRIWDVKTGKCLKT--LPAHS--DPVSAVHFNRDGSLIVSSSY 191
Query: 86 DGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVK 145
DG R+WD S C+++++ + F+ + +++L+ D+T+KLW+ S G+ +K
Sbjct: 192 DGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK 250
Query: 146 QYLGATHTQLRFQAVFNDTE-EFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIE 204
Y G + + A F+ T ++++S E N + IW+ T E V K H
Sbjct: 251 TYTGHKNEKYCIFANFSVTGGKWIVSGSE-DNLVYIWNLQTKEIVQKLQG-HTDVVISTA 308
Query: 205 HSPAEAAFITCG--TDRSVRFWK 225
P E + D++++ WK
Sbjct: 309 CHPTENIIASAALENDKTIKLWK 331
Score = 150 (57.9 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 50/215 (23%), Positives = 94/215 (43%)
Query: 13 FRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHL---YDVNTFQCYLSANVPEISVNGAIN 69
F + T V SV F P+G++L + + + + YD F+ +S + IS
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKLGIS------ 91
Query: 70 QVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGK 129
V +SS + V+AS D +++WD S C++++ G H NF ++S
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKG-HSNY-VFCCNFNPQSNLIVSGSF 149
Query: 130 DSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKV 189
D +V++W+V +G+ +K L A H+ FN ++S IWD + + +
Sbjct: 150 DESVRIWDVKTGKCLKT-LPA-HSDPVSAVHFNRDGSLIVS-SSYDGLCRIWDTASGQCL 206
Query: 190 AKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+ +++ SP + D +++ W
Sbjct: 207 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 241
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 200 (75.5 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 49/203 (24%), Positives = 101/203 (49%)
Query: 26 SFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTASK 85
+F+P + +++G+ ++DV T +C + +P S ++ V ++ G + V++S
Sbjct: 163 NFNPQSNLIVSGSFDESVRIWDVRTGKCLKT--LPAHS--DPVSAVHFNRDGSLIVSSSY 218
Query: 86 DGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVK 145
DG R+WD S C+++++ + F+ + +++L+ D+T+KLW+ S G+ +K
Sbjct: 219 DGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK 277
Query: 146 QYLGATHTQLRFQAVFNDTE-EFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIE 204
Y G + + A F+ T ++++S E N + IW+ + E V K H
Sbjct: 278 TYTGHKNEKYCIFANFSVTGGKWIVSGSE-DNMVYIWNLQSKEVVQKLQG-HTDTVLCTA 335
Query: 205 HSPAEAAFITCG--TDRSVRFWK 225
P E + D++++ WK
Sbjct: 336 CHPTENIIASAALENDKTIKLWK 358
Score = 139 (54.0 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 39/166 (23%), Positives = 78/166 (46%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
V +V F+ G +++ + + ++D + QC L + + N ++ V++S G +
Sbjct: 201 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC-LKTLIDDD--NPPVSFVKFSPNGKYIL 257
Query: 82 TASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFT-KDQRFVLSCGKDSTVKLWEVSS 140
A+ D ++LWD C+++ G ANF+ ++++S +D+ V +W + S
Sbjct: 258 AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQS 317
Query: 141 GRLVKQYLGATHTQLRFQAVFNDTEEFVLSID-EPSNEIVIWDALT 185
+V++ G T T L + TE + S E I +W + T
Sbjct: 318 KEVVQKLQGHTDTVLC--TACHPTENIIASAALENDKTIKLWKSDT 361
Score = 136 (52.9 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 41/160 (25%), Positives = 71/160 (44%)
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLS 126
A++ V++S G ++S D I++W ++I G H + A ++ D R ++S
Sbjct: 74 AVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVA-WSSDSRLLVS 131
Query: 127 CGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLS--IDEPSNEIVIWDAL 184
D T+K+WE+S+G+ +K G H+ F FN ++S DE + IWD
Sbjct: 132 GSDDKTLKVWELSTGKSLKTLKG--HSNYVFCCNFNPQSNLIVSGSFDE---SVRIWDVR 186
Query: 185 TAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
T K K H + + + ++ D R W
Sbjct: 187 TG-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 225
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 202 (76.2 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 60/218 (27%), Positives = 102/218 (46%)
Query: 8 TAKRAFRVIQDTHNVRSVSF-HPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNG 66
TA + ++ NV S+ SG L G D +L+ +N C +S
Sbjct: 9 TAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT----GHTS 64
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLS 126
+ VR ++ + V S+ G+IR+WD +A +R+++G H A S +F FV S
Sbjct: 65 PVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMG-H-KANICSLDFHPYGEFVAS 122
Query: 127 CGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTA 186
+D+ +KLW++ V +Y G H+Q F+ +++ S + + + +WD LTA
Sbjct: 123 GSQDTNIKLWDIRRKGCVFRYRG--HSQAVRCLRFSPDGKWLASAAD-DHTVKLWD-LTA 178
Query: 187 EKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
K+ H G +E P E + +DR++RFW
Sbjct: 179 GKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Score = 122 (48.0 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 30/124 (24%), Positives = 58/124 (46%)
Query: 21 NVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMY 80
N+ S+ FHP G+F+ +G+ L+D+ C + A+ +R+S G
Sbjct: 107 NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYR----GHSQAVRCLRFSPDGKWL 162
Query: 81 VTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSS 140
+A+ D ++LWD ++A + S H T F ++ + S D T++ W++
Sbjct: 163 ASAADDHTVKLWD-LTAGKMMSEFPGH-TGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Query: 141 GRLV 144
++V
Sbjct: 221 FQVV 224
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 39/164 (23%), Positives = 72/164 (43%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T V SV + + ++AG+ ++D+ + + + I + + G
Sbjct: 63 TSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTL----MGHKANICSLDFHPYGE 118
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
+ S+D I+LWD CV G H A F+ D +++ S D TVKLW++
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRG-HSQA-VRCLRFSPDGKWLASAADDHTVKLWDL 176
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWD 182
++G+++ ++ G HT F+ E ++L+ I WD
Sbjct: 177 TAGKMMSEFPG--HTGPVNVVEFHPNE-YLLASGSSDRTIRFWD 217
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 195 (73.7 bits), Expect = 5.3e-15, P = 5.3e-15
Identities = 48/173 (27%), Positives = 91/173 (52%)
Query: 20 HN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTG 77
HN V +F+P +++G+ ++DV T C + +P S ++ V ++ G
Sbjct: 170 HNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKT--LPAHS--DPVSAVSFNRDG 225
Query: 78 GMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWE 137
+ + S DG +R+WD + C++++V A F+ + +++L+ DST+KLW+
Sbjct: 226 SLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAF-VKFSPNGKYILASNLDSTLKLWD 284
Query: 138 VSSGRLVKQYLGATHTQLRFQAVFNDTE-EFVLSIDEPSNEIVIWDALTAEKV 189
S G+ +KQY G +++ A F+ T ++++S E +I IW+ T E V
Sbjct: 285 FSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDC-KIYIWNLQTREIV 336
Score = 135 (52.6 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 40/163 (24%), Positives = 75/163 (46%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
V +VSF+ G + +G+ + ++D QC + E N + V++S G Y+
Sbjct: 216 VSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDE---NPPVAFVKFSPNG-KYI 271
Query: 82 TASK-DGAIRLWDGVSANCVRSIVGAHGTAEATSANFT-KDQRFVLSCGKDSTVKLWEVS 139
AS D ++LWD ++ G + ANF+ ++++S +D + +W +
Sbjct: 272 LASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQ 331
Query: 140 SGRLVKQYLGATHTQLRFQAVFNDTEEFVLS-IDEPSNEIVIW 181
+ +V+ G HTQ + + + + S EP N+I IW
Sbjct: 332 TREIVQCLEG--HTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 128 (50.1 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 41/206 (19%), Positives = 86/206 (41%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T ++ S F P G +L + +++++ C + ++ VN + +SS
Sbjct: 87 TKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVN----DIAWSSDSR 142
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
V+AS D +++++ V++ +++ G H NF V+S D +V++W+V
Sbjct: 143 CVVSASDDKTLKIFEIVTSRMTKTLKG-HNNY-VFCCNFNPQSSLVVSGSFDESVRIWDV 200
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIG 198
+G +K L A H+ FN + S + IWD + + +
Sbjct: 201 KTGMCIKT-LPA-HSDPVSAVSFNRDGSLIAS-GSYDGLVRIWDTANGQCIKTLVDDENP 257
Query: 199 APRWIEHSPAEAAFITCGTDRSVRFW 224
+++ SP + D +++ W
Sbjct: 258 PVAFVKFSPNGKYILASNLDSTLKLW 283
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 195 (73.7 bits), Expect = 5.3e-15, P = 5.3e-15
Identities = 48/173 (27%), Positives = 91/173 (52%)
Query: 20 HN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTG 77
HN V +F+P +++G+ ++DV T C + +P S ++ V ++ G
Sbjct: 170 HNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKT--LPAHS--DPVSAVSFNRDG 225
Query: 78 GMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWE 137
+ + S DG +R+WD + C++++V A F+ + +++L+ DST+KLW+
Sbjct: 226 SLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAF-VKFSPNGKYILASNLDSTLKLWD 284
Query: 138 VSSGRLVKQYLGATHTQLRFQAVFNDTE-EFVLSIDEPSNEIVIWDALTAEKV 189
S G+ +KQY G +++ A F+ T ++++S E +I IW+ T E V
Sbjct: 285 FSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDC-KIYIWNLQTREIV 336
Score = 135 (52.6 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 40/163 (24%), Positives = 75/163 (46%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
V +VSF+ G + +G+ + ++D QC + E N + V++S G Y+
Sbjct: 216 VSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDE---NPPVAFVKFSPNG-KYI 271
Query: 82 TASK-DGAIRLWDGVSANCVRSIVGAHGTAEATSANFT-KDQRFVLSCGKDSTVKLWEVS 139
AS D ++LWD ++ G + ANF+ ++++S +D + +W +
Sbjct: 272 LASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQ 331
Query: 140 SGRLVKQYLGATHTQLRFQAVFNDTEEFVLS-IDEPSNEIVIW 181
+ +V+ G HTQ + + + + S EP N+I IW
Sbjct: 332 TREIVQCLEG--HTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 128 (50.1 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 41/206 (19%), Positives = 86/206 (41%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T ++ S F P G +L + +++++ C + ++ VN + +SS
Sbjct: 87 TKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVN----DIAWSSDSR 142
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
V+AS D +++++ V++ +++ G H NF V+S D +V++W+V
Sbjct: 143 CVVSASDDKTLKIFEIVTSRMTKTLKG-HNNY-VFCCNFNPQSSLVVSGSFDESVRIWDV 200
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIG 198
+G +K L A H+ FN + S + IWD + + +
Sbjct: 201 KTGMCIKT-LPA-HSDPVSAVSFNRDGSLIAS-GSYDGLVRIWDTANGQCIKTLVDDENP 257
Query: 199 APRWIEHSPAEAAFITCGTDRSVRFW 224
+++ SP + D +++ W
Sbjct: 258 PVAFVKFSPNGKYILASNLDSTLKLW 283
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 192 (72.6 bits), Expect = 7.3e-15, P = 7.3e-15
Identities = 49/203 (24%), Positives = 100/203 (49%)
Query: 26 SFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTASK 85
+F+P + +++G+ ++DV T +C + +P S ++ V ++ G + V++S
Sbjct: 136 NFNPQSNLIVSGSFDESVRIWDVKTGKCLKT--LPAHS--DPVSAVHFNRDGSLIVSSSY 191
Query: 86 DGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVK 145
DG R+WD S C+++++ + F+ + +++L+ D+T+KLW+ S G+ +K
Sbjct: 192 DGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK 250
Query: 146 QYLGATHTQLRFQAVFNDTE-EFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIE 204
Y + + A F+ T ++++S E N + IW+ T E V K H
Sbjct: 251 TYTCHKNEKYCIFANFSVTGGKWIVSGSE-DNLVYIWNLQTKEVVQKLQG-HTDVVISTA 308
Query: 205 HSPAEAAFITCG--TDRSVRFWK 225
P E + D++++ WK
Sbjct: 309 CHPTENIIASAALENDKTIKLWK 331
Score = 150 (57.9 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 50/215 (23%), Positives = 94/215 (43%)
Query: 13 FRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHL---YDVNTFQCYLSANVPEISVNGAIN 69
F + T V SV F P+G++L + + + + YD F+ +S + IS
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKLGIS------ 91
Query: 70 QVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGK 129
V +SS + V+AS D +++WD S C++++ G H NF ++S
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKG-HSNY-VFCCNFNPQSNLIVSGSF 149
Query: 130 DSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKV 189
D +V++W+V +G+ +K L A H+ FN ++S IWD + + +
Sbjct: 150 DESVRIWDVKTGKCLKT-LPA-HSDPVSAVHFNRDGSLIVS-SSYDGLCRIWDTASGQCL 206
Query: 190 AKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+ +++ SP + D +++ W
Sbjct: 207 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 241
>GENEDB_PFALCIPARUM|PFF1000w [details] [associations]
symbol:PFF1000w "cleavage stimulation factor
subunit 1-like protein, putative" species:5833 "Plasmodium
falciparum" [GO:0003723 "RNA binding" evidence=ISS] [GO:0006396
"RNA processing" evidence=ISS] [GO:0005848 "mRNA cleavage
stimulating factor complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003723 GO:GO:0006396
EMBL:AL844505 GO:GO:0005848 RefSeq:XP_966191.1
ProteinModelPortal:C6KT45 IntAct:C6KT45 PRIDE:C6KT45
EnsemblProtists:PFF1000w:mRNA GeneID:3885969 KEGG:pfa:PFF1000w
EuPathDB:PlasmoDB:PF3D7_0620500 HOGENOM:HOG000281560 OMA:INDEHEN
ProtClustDB:CLSZ2444831 Uniprot:C6KT45
Length = 650
Score = 196 (74.1 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 47/163 (28%), Positives = 81/163 (49%)
Query: 16 IQDTHNVRSVSFHPSGDFLLAGT-DHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYS 74
IQD + S+ HP GDFL A + I +YD+ T C+ S + + + IN + +
Sbjct: 428 IQDKNPYISMYVHPCGDFLYASNRNENILKMYDLQTLTCFKSIDTYKYHTS-TINDIHGT 486
Query: 75 STGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVK 134
G MY + S DG I++WDG ++ V + AH S F K ++L+ G D K
Sbjct: 487 IDGTMYSSVSDDGHIKIWDGHNSKLVHTQFNAHNGYSIESVKFNKSGFYMLTAGLDGQSK 546
Query: 135 LWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNE 177
+W++ + + + + +++F + E F+ +I +P NE
Sbjct: 547 IWDLRNFKSLFTFGNGLSCSSN-KSIFMNNEYFIANIIQP-NE 587
>UNIPROTKB|C6KT45 [details] [associations]
symbol:PFF1000w "Cleavage stimulation factor subunit 1-like
protein, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005848 "mRNA cleavage
stimulating factor complex" evidence=ISS] [GO:0006396 "RNA
processing" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003723 GO:GO:0006396 EMBL:AL844505
GO:GO:0005848 RefSeq:XP_966191.1 ProteinModelPortal:C6KT45
IntAct:C6KT45 PRIDE:C6KT45 EnsemblProtists:PFF1000w:mRNA
GeneID:3885969 KEGG:pfa:PFF1000w EuPathDB:PlasmoDB:PF3D7_0620500
HOGENOM:HOG000281560 OMA:INDEHEN ProtClustDB:CLSZ2444831
Uniprot:C6KT45
Length = 650
Score = 196 (74.1 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 47/163 (28%), Positives = 81/163 (49%)
Query: 16 IQDTHNVRSVSFHPSGDFLLAGT-DHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYS 74
IQD + S+ HP GDFL A + I +YD+ T C+ S + + + IN + +
Sbjct: 428 IQDKNPYISMYVHPCGDFLYASNRNENILKMYDLQTLTCFKSIDTYKYHTS-TINDIHGT 486
Query: 75 STGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVK 134
G MY + S DG I++WDG ++ V + AH S F K ++L+ G D K
Sbjct: 487 IDGTMYSSVSDDGHIKIWDGHNSKLVHTQFNAHNGYSIESVKFNKSGFYMLTAGLDGQSK 546
Query: 135 LWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNE 177
+W++ + + + + +++F + E F+ +I +P NE
Sbjct: 547 IWDLRNFKSLFTFGNGLSCSSN-KSIFMNNEYFIANIIQP-NE 587
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 194 (73.4 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 61/218 (27%), Positives = 104/218 (47%)
Query: 8 TAKRAFRVIQDTHNVRSVSFHPS-GDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNG 66
TA + ++ + NV S+ S G L G D +++ VN C +S
Sbjct: 9 TAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLT----GHTT 64
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLS 126
I ++ S+ + V S+ G+IR+WD +A +R+++G H A S +F FV S
Sbjct: 65 PIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLG-H-KANICSLDFHPYGSFVAS 122
Query: 127 CGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTA 186
D+ +KLW+V + +Y +HTQ F+ +++ S + + + +WD LTA
Sbjct: 123 GSLDTDIKLWDVRRKGCIFKY--KSHTQAVRCLRFSPDGKWLASAAD-DHTVKLWD-LTA 178
Query: 187 EKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
KV + H G +E P+E + +DR++RFW
Sbjct: 179 GKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFW 216
Score = 117 (46.2 bits), Expect = 0.00030, P = 0.00030
Identities = 30/124 (24%), Positives = 52/124 (41%)
Query: 21 NVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMY 80
N+ S+ FHP G F+ +G+ L+DV C S A+ +R+S G
Sbjct: 107 NICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYK----SHTQAVRCLRFSPDGKWL 162
Query: 81 VTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSS 140
+A+ D ++LWD + + G G F + + S D T++ W++
Sbjct: 163 ASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVE--FHPSEYLLASGSSDRTIRFWDLEK 220
Query: 141 GRLV 144
+V
Sbjct: 221 FHVV 224
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 185 (70.2 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 55/211 (26%), Positives = 103/211 (48%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
V VSF+P + +++G+ ++DVNT +C + V G V ++ G + V
Sbjct: 133 VFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTG----VHFNRDGTLVV 188
Query: 82 TASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSG 141
+ S DG +R+WD + + +I G E + F+ + +FVL+ D+T++LW ++
Sbjct: 189 SGSYDGTVRIWDTTTGQLLNTISTEDGK-EVSFVKFSPNGKFVLAGTLDNTLRLWSYNNN 247
Query: 142 R-LVKQYLGATHTQLRFQAVFNDT-EEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGA 199
+ +K Y G + + + F+ T +++++ E N I I++ T E + + + H
Sbjct: 248 KKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSE-DNLIYIYNLQTRE-IVQTLAGHEDV 305
Query: 200 PRWIEHSPAEAAFITCGT---DRSVRFWKEI 227
+ P E I G DRSV+ WK +
Sbjct: 306 VLTVACHPTEN-IIASGALEKDRSVKIWKHM 335
Score = 169 (64.5 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 45/159 (28%), Positives = 74/159 (46%)
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLS 126
+I+ V++S G +AS D I++W R++ G H + A +++D + + S
Sbjct: 48 SISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEG-HKEGISDIA-WSQDSKLICS 105
Query: 127 CGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTA 186
D T+K+W+V SG++VK G H + F FN ++S N + IWD T
Sbjct: 106 ASDDKTIKIWDVESGKMVKTLKG--HKEYVFGVSFNPQSNLIVSGSFDEN-VRIWDVNTG 162
Query: 187 EKVAKWSSNHIGAPRWIEHSPAEAAFITCGT-DRSVRFW 224
E K S H + H + + G+ D +VR W
Sbjct: 163 E-CTKMISAHSDPVTGV-HFNRDGTLVVSGSYDGTVRIW 199
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 184 (69.8 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 60/218 (27%), Positives = 101/218 (46%)
Query: 8 TAKRAFRVIQDTHNVRSVSFHPS-GDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNG 66
TA + ++ + NV S+ S G L G D +++ VN C +S
Sbjct: 9 TAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLT----GHTT 64
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLS 126
I ++ S+ + V S+ G+IR+WD +A +R+++G H A S +F FV S
Sbjct: 65 PIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLG-H-KANICSLDFHPYGSFVAS 122
Query: 127 CGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTA 186
D+ +KLW+V + +Y +HTQ F+ +++ S + + + +WD LTA
Sbjct: 123 GSLDTDIKLWDVRRKGCIFKY--KSHTQAVRCLRFSPDGKWLASAAD-DHTVKLWD-LTA 178
Query: 187 EKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
KV + H G +E P+E R++RFW
Sbjct: 179 GKVMFEFTGHYGPVNVVEFHPSEYPLAGSPVHRTIRFW 216
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 56/212 (26%), Positives = 96/212 (45%)
Query: 8 TAKRAFRVIQDTHNVRSVSF-HPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNG 66
TA + ++ NV S+ SG L G D +L+ +N C +S
Sbjct: 9 TAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT----GHTS 64
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLS 126
+ VR ++ + V S+ G+IR+WD +A +R+++G H A S +F FV S
Sbjct: 65 PVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMG-H-KANICSLDFHPYGEFVAS 122
Query: 127 CGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTA 186
+D+ +KLW++ V +Y G H+Q F+ +++ S + + + +WD LTA
Sbjct: 123 GSQDTNIKLWDIRRKGCVFRYRG--HSQAVRCLRFSPDGKWLASAAD-DHTVKLWD-LTA 178
Query: 187 EKVAKWSSNHIGAPRWIEHSPAEAAFITCGTD 218
K+ H G +E P E + +D
Sbjct: 179 GKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 129 (50.5 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 33/150 (22%), Positives = 67/150 (44%)
Query: 75 STGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVK 134
++G + T D + LW NC+ S+ G H T+ S + +++ + +++
Sbjct: 31 ASGRLLATGGDDCRVNLWSINKPNCIMSLTG-H-TSPVESVRLNTPEELIVAGSQSGSIR 88
Query: 135 LWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSS 194
+W++ + ++++ +G H F+ EFV S + +N I +WD V ++
Sbjct: 89 VWDLEAAKILRTLMG--HKANICSLDFHPYGEFVASGSQDTN-IKLWDIRRKGCVFRYRG 145
Query: 195 NHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
H A R + SP + D +V+ W
Sbjct: 146 -HSQAVRCLRFSPDGKWLASAADDHTVKLW 174
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 174 (66.3 bits), Expect = 6.8e-13, P = 6.8e-13
Identities = 55/207 (26%), Positives = 88/207 (42%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T VRSV F G L+ +D ++ V+ Q +L + I+ + R+S G
Sbjct: 104 TATVRSVHFSSDGQSLVTASDDKTIKVWTVHR-QKFLFSLSQHINW---VRCARFSPDGR 159
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
+ +AS D ++LWD S C+ S HG A F + + G D TVK+W+V
Sbjct: 160 LIASASDDKTVKLWDKTSRECIHSFC-EHG-GFANHVEFHPSGTCIAAAGTDKTVKVWDV 217
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIG 198
RL++ Y HT F+ + ++++ S + I D L ++ H G
Sbjct: 218 RMNRLLQHY--QVHTAAVNSLSFHPSGNYLITASNDST-LKILDLLEG-RLLYTLHGHQG 273
Query: 199 APRWIEHSPAEAAFITCGTDRSVRFWK 225
+ S F + G+D V WK
Sbjct: 274 PATCVAFSRTGDFFASGGSDEQVMVWK 300
Score = 137 (53.3 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 37/158 (23%), Positives = 72/158 (45%)
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLS 126
A+ V++S +G + + S+D + LW S ++ AH TA S +F+ D + +++
Sbjct: 64 AVMCVQFSPSGHLVASGSRDKTVCLWVP-SVKGESTVFKAH-TATVRSVHFSSDGQSLVT 121
Query: 127 CGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTA 186
D T+K+W V + + + + H A F+ + S + + +WD +
Sbjct: 122 ASDDKTIKVWTVHRQKFL--FSLSQHINWVRCARFSPDGRLIASASDDKT-VKLWDKTSR 178
Query: 187 EKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
E + + H G +E P+ GTD++V+ W
Sbjct: 179 ECIHSFCE-HGGFANHVEFHPSGTCIAAAGTDKTVKVW 215
Score = 133 (51.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 42/172 (24%), Positives = 72/172 (41%)
Query: 10 KRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAIN 69
K F + Q + VR F P G + + +D L+D + +C S G N
Sbjct: 137 KFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSF----CEHGGFAN 192
Query: 70 QVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGK 129
V + +G A D +++WD V N + H TA S +F ++++
Sbjct: 193 HVEFHPSGTCIAAAGTDKTVKVWD-VRMNRLLQHYQVH-TAAVNSLSFHPSGNYLITASN 250
Query: 130 DSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
DST+K+ ++ GRL+ G H F+ T +F S ++++W
Sbjct: 251 DSTLKILDLLEGRLLYTLHG--HQGPATCVAFSRTGDFFAS-GGSDEQVMVW 299
Score = 119 (46.9 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 47/214 (21%), Positives = 82/214 (38%)
Query: 11 RAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLY--DVNTFQCYLSANVPEISVNGAI 68
RA+ ++ V V F PSG + +G+ L+ V A+ +
Sbjct: 54 RAYCLVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHT------ATV 107
Query: 69 NQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCG 128
V +SS G VTAS D I++W + S+ H A F+ D R + S
Sbjct: 108 RSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSL-SQH-INWVRCARFSPDGRLIASAS 165
Query: 129 KDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEK 188
D TVKLW+ +S + + H F+ + + + + +WD + +
Sbjct: 166 DDKTVKLWDKTSRECIHSF--CEHGGFANHVEFHPSGTCIAAAGTDKT-VKVWD-VRMNR 221
Query: 189 VAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVR 222
+ + H A + P+ IT D +++
Sbjct: 222 LLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLK 255
Score = 113 (44.8 bits), Expect = 0.00029, P = 0.00029
Identities = 32/116 (27%), Positives = 54/116 (46%)
Query: 25 VSFHPSGDFLLA-GTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTA 83
V FHPSG + A GTD + ++DV + V A+N + + +G +TA
Sbjct: 194 VEFHPSGTCIAAAGTDKTVK-VWDVRMNRLLQHYQVH----TAAVNSLSFHPSGNYLITA 248
Query: 84 SKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVS 139
S D +++ D + + ++ G G A T F++ F S G D V +W+ +
Sbjct: 249 SNDSTLKILDLLEGRLLYTLHGHQGPA--TCVAFSRTGDFFASGGSDEQVMVWKTN 302
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 161 (61.7 bits), Expect = 8.3e-13, Sum P(2) = 8.3e-13
Identities = 46/172 (26%), Positives = 83/172 (48%)
Query: 9 AKRAFRVIQDTHN-VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGA 67
A+ R + HN V ++F P G+ L +G+ L+DV + L ++P S
Sbjct: 295 ARGTRRPLLGHHNYVYCLAFSPKGNILASGSYDEAVFLWDVRAGR--LMRSLPAHS--DP 350
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
++ + + G + V+ S DG IR+WD + C+R++V A T+ F+ + R++L+
Sbjct: 351 VSGIDFCRDGTLVVSCSTDGLIRIWDTATGQCLRTLVHEDNPA-VTNVCFSPNGRYILAF 409
Query: 128 GKDSTVKLWEVSS--GRLVKQYLGATHTQLRFQAVFNDTEEFVLSI-DEPSN 176
DS ++LW+ + ++ K Y G +T F ++ I DE N
Sbjct: 410 NLDSCIRLWDYIAHPSKVKKTYQGHVNTGFSIGGCFGVVQDEEEEIEDEQQN 461
Score = 59 (25.8 bits), Expect = 8.3e-13, Sum P(2) = 8.3e-13
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 165 EEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+ FV S E + IV+WD + E V K ++ H G W++ ++ G D + +
Sbjct: 486 QAFVASASEDGH-IVLWDVKSKEVVQKIAA-HDGVCFWVD--VVGDTMVSAGKDARILVY 541
Query: 225 KEIL 228
+ L
Sbjct: 542 RNTL 545
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 56/207 (27%), Positives = 95/207 (45%)
Query: 5 SKATAKRAFR-VIQDTHNVRSVSF-HPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEI 62
++A A A ++ NV S+ SG L G D +L+ +N C +S
Sbjct: 9 AQAAAVAAVEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT---- 64
Query: 63 SVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQR 122
+ VR ++ + V S+ G+IR+WD +A +R+++G H A S +F
Sbjct: 65 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMG-H-KANICSLDFHPYGE 122
Query: 123 FVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWD 182
FV S +D+ +KLW++ V +Y G H+Q F+ +++ S + + + +WD
Sbjct: 123 FVASGSQDTNIKLWDIRRKGCVFRYRG--HSQAVRCLRFSPDGKWLASAAD-DHTVKLWD 179
Query: 183 ALTAEKVAKWSSNHIGAPRWIEHSPAE 209
LTA K+ H G +E P E
Sbjct: 180 -LTAGKMMSEFPGHTGPVNVVEFHPNE 205
Score = 129 (50.5 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 33/150 (22%), Positives = 67/150 (44%)
Query: 75 STGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVK 134
++G + T D + LW NC+ S+ G H T+ S + +++ + +++
Sbjct: 35 ASGRLLATGGDDCRVNLWSINKPNCIMSLTG-H-TSPVESVRLNTPEELIVAGSQSGSIR 92
Query: 135 LWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSS 194
+W++ + ++++ +G H F+ EFV S + +N I +WD V ++
Sbjct: 93 VWDLEAAKILRTLMG--HKANICSLDFHPYGEFVASGSQDTN-IKLWDIRRKGCVFRYRG 149
Query: 195 NHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
H A R + SP + D +V+ W
Sbjct: 150 -HSQAVRCLRFSPDGKWLASAADDHTVKLW 178
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 176 (67.0 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 59/219 (26%), Positives = 102/219 (46%)
Query: 8 TAKRAFRVIQDTHNVRSVSFHPS-GDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNG 66
TA + ++ + NV S+ S G L G D +++ VN C +S
Sbjct: 9 TAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLT----GHTT 64
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLS 126
I ++ S+ + V S+ G+IR+WD +A +R+++G H A S +F FV S
Sbjct: 65 PIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLG-H-KANICSLDFHPYGSFVAS 122
Query: 127 CGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTA 186
D+ +KLW+V + +Y +HTQ F+ +++ S + + + +WD LTA
Sbjct: 123 GSLDTDIKLWDVRRKGCIFKY--KSHTQAVRCLRFSPDGKWLASAAD-DHTVKLWD-LTA 178
Query: 187 EKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDR-SVRFW 224
KV + H G +E P+ + G+ ++RFW
Sbjct: 179 GKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFW 217
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 169 (64.5 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 53/207 (25%), Positives = 90/207 (43%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T VRSV F G L+ +D ++ + Q +L + I+ + ++S G
Sbjct: 103 TATVRSVHFCSDGQLLVTASDDKTVKVWSTHR-QRFLFSLTQHINW---VRCAKFSPDGR 158
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
+ V+AS D ++LWD S CV S HG T +F + + G D+TVK+W+
Sbjct: 159 LIVSASDDKTVKLWDKTSRECVHSYC-EHG-GFVTYVDFHPSGTCIAAAGMDNTVKVWDT 216
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIG 198
+ RLV+ Y H+ F+ + ++++ S + I D + ++ H G
Sbjct: 217 RTHRLVQHY--QLHSAAVNALSFHPSGNYLITASSDST-LKILDLMEG-RLLYTLHGHQG 272
Query: 199 APRWIEHSPAEAAFITCGTDRSVRFWK 225
+ S F + G+D V WK
Sbjct: 273 PATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 142 (55.0 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 53/214 (24%), Positives = 86/214 (40%)
Query: 11 RAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQ 70
RA+R V V+F PSG L +G+ ++ N + + +
Sbjct: 53 RAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNV----KGESTVFRAHTATVRS 108
Query: 71 VRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKD 130
V + S G + VTAS D +++W + S+ H A F+ D R ++S D
Sbjct: 109 VHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLT-QH-INWVRCAKFSPDGRLIVSASDD 166
Query: 131 STVKLWEVSSGRLVKQYL--GATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEK 188
TVKLW+ +S V Y G T + F + T +D N + +WD T
Sbjct: 167 KTVKLWDKTSRECVHSYCEHGGFVTYVDFHP--SGTCIAAAGMD---NTVKVWDTRTHRL 221
Query: 189 VAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVR 222
V + H A + P+ IT +D +++
Sbjct: 222 VQHYQL-HSAAVNALSFHPSGNYLITASSDSTLK 254
Score = 138 (53.6 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 37/159 (23%), Positives = 69/159 (43%)
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLW-DGVSANCVRSIVGAHGTAEATSANFTKDQRFVL 125
A+ V +S +G + + S+D +R+W V ++ AH TA S +F D + ++
Sbjct: 63 AVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGES--TVFRAH-TATVRSVHFCSDGQLLV 119
Query: 126 SCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALT 185
+ D TVK+W R + + H A F+ ++S + + +WD +
Sbjct: 120 TASDDKTVKVWSTHRQRFL--FSLTQHINWVRCAKFSPDGRLIVSASDDKT-VKLWDKTS 176
Query: 186 AEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
E V + H G +++ P+ G D +V+ W
Sbjct: 177 RECVHSYCE-HGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Score = 124 (48.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 37/169 (21%), Positives = 71/169 (42%)
Query: 13 FRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVR 72
F + Q + VR F P G +++ +D L+D + +C S G + V
Sbjct: 139 FSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSY----CEHGGFVTYVD 194
Query: 73 YSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDST 132
+ +G A D +++WD + V+ H A + +F ++++ DST
Sbjct: 195 FHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQ-LHSAA-VNALSFHPSGNYLITASSDST 252
Query: 133 VKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
+K+ ++ GRL+ G H F+ T E+ S ++++W
Sbjct: 253 LKILDLMEGRLLYTLHG--HQGPATTVAFSRTGEYFAS-GGSDEQVMVW 298
>FB|FBgn0038666 [details] [associations]
symbol:Smu1 "SMU1 ortholog" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0072553 "terminal button organization" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 EMBL:AE014297
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007528 GO:GO:0007274 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 GO:GO:0072553 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:AY051929 RefSeq:NP_001247189.1
RefSeq:NP_001247190.1 RefSeq:NP_650766.1 UniGene:Dm.1247 SMR:Q9VE18
EnsemblMetazoa:FBtr0083721 EnsemblMetazoa:FBtr0304689
EnsemblMetazoa:FBtr0304690 GeneID:42272 KEGG:dme:Dmel_CG5451
UCSC:CG5451-RA FlyBase:FBgn0038666 InParanoid:Q9VE18
OrthoDB:EOG4MKKXF GenomeRNAi:42272 NextBio:827995 Uniprot:Q9VE18
Length = 509
Score = 171 (65.3 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 53/217 (24%), Positives = 93/217 (42%)
Query: 11 RAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCY--LSANVPE--ISVNG 66
R + Q +H V F P G +L+ G+ +++ T + L + + +
Sbjct: 207 RQIKFGQKSH-VECAQFSPDGQYLITGSVDGFLEVWNFTTGKVRKDLKYQAQDQFMMMEQ 265
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLS 126
A+ + +S M + ++DG I++W ++ C+R AH T T F++D VLS
Sbjct: 266 AVLALNFSRDSEMVASGAQDGQIKVWRIITGQCLRKFEKAH-TKGITCLQFSRDNSQVLS 324
Query: 127 CGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTA 186
D TV+L + SG+++K++ G H+ +A F VLS + +W T
Sbjct: 325 ASFDYTVRLHGLKSGKMLKEFKG--HSSFVNEATFTPDGHSVLSASSDGT-VKVWSLKTT 381
Query: 187 EKVAKWS--SNHIGAPRWIEHSPAEAAFITCGTDRSV 221
E VA + N + + FI C +V
Sbjct: 382 ECVATYKPLGNELAVNTVLILPKNPEHFIVCNRSNTV 418
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 170 (64.9 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 55/203 (27%), Positives = 90/203 (44%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
+ SV F P+G L G+ L+ + Q V V I V++S G +
Sbjct: 21 ITSVDFSPNGKQLATGSWDTFLMLWSLRP-QARAFRYVGHKDV---ITSVQFSPLGNLLA 76
Query: 82 TASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSG 141
+AS+D IRLW S AH TA S +F+ D +F+ S +D ++K+W +
Sbjct: 77 SASRDRTIRLWIPDKRG-KSSEFKAH-TAPVRSVDFSADGQFLASASEDKSIKVWNMYRQ 134
Query: 142 RLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPR 201
R + TH +R A F+ ++S E I IWD + V +S + +G
Sbjct: 135 RFLYSLYRHTHW-VRC-AKFSPDGRLIVSCSEDKT-IKIWDTTNKQCVNNFS-DFVGFAN 190
Query: 202 WIEHSPAEAAFITCGTDRSVRFW 224
++ +P + G+D +V+ W
Sbjct: 191 FVAFNPNGTCIASAGSDHTVKIW 213
Score = 151 (58.2 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 50/213 (23%), Positives = 92/213 (43%)
Query: 11 RAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGA-IN 69
RAFR + + SV F P G+ L + + L+ + E + A +
Sbjct: 52 RAFRYVGHKDVITSVQFSPLGNLLASASRDRTIRLWIPDK-----RGKSSEFKAHTAPVR 106
Query: 70 QVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGK 129
V +S+ G +AS+D +I++W+ + S+ H T A F+ D R ++SC +
Sbjct: 107 SVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLY-RH-THWVRCAKFSPDGRLIVSCSE 164
Query: 130 DSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKV 189
D T+K+W+ ++ + V + F A FN + S + + IWD + K+
Sbjct: 165 DKTIKIWDTTNKQCVNNFSDFVGFA-NFVA-FNPNGTCIASAGS-DHTVKIWD-IRVNKL 220
Query: 190 AKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVR 222
+ H G + P+ IT +D +++
Sbjct: 221 LQHYQVHSGGVNCVSFHPSGNYLITASSDGTLK 253
Score = 138 (53.6 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 46/207 (22%), Positives = 86/207 (41%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T VRSV F G FL + ++ ++++ Q +L + + ++S G
Sbjct: 102 TAPVRSVDFSADGQFLASASEDKSIKVWNMYR-QRFLYSLYRHTHW---VRCAKFSPDGR 157
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
+ V+ S+D I++WD + CV + G A + F + + S G D TVK+W++
Sbjct: 158 LIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVA--FNPNGTCIASAGSDHTVKIWDI 215
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIG 198
+L++ Y H+ F+ + ++++ + I D L + H G
Sbjct: 216 RVNKLLQHY--QVHSGGVNCVSFHPSGNYLITASSDGT-LKILDLLEGRLIYTLQG-HTG 271
Query: 199 APRWIEHSPAEAAFITCGTDRSVRFWK 225
+ S F + G D V W+
Sbjct: 272 PVFTVSFSKGGELFTSGGADAQVLLWR 298
Score = 124 (48.7 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 40/183 (21%), Positives = 78/183 (42%)
Query: 13 FRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVR 72
+ + + TH VR F P G +++ ++ ++D QC N + G N V
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCV--NNFSDFV--GFANFVA 193
Query: 73 YSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDST 132
++ G +A D +++WD + N + H + +F ++++ D T
Sbjct: 194 FNPNGTCIASAGSDHTVKIWD-IRVNKLLQHYQVH-SGGVNCVSFHPSGNYLITASSDGT 251
Query: 133 VKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW----DALTAEK 188
+K+ ++ GRL+ G HT F F+ E S + ++++W D L +
Sbjct: 252 LKILDLLEGRLIYTLQG--HTGPVFTVSFSKGGELFTSGGADA-QVLLWRTNFDELNYKD 308
Query: 189 VAK 191
V+K
Sbjct: 309 VSK 311
>RGD|727868 [details] [associations]
symbol:Nsmaf "neutral sphingomyelinase (N-SMase) activation
associated factor" species:10116 "Rattus norvegicus" [GO:0006917
"induction of apoptosis" evidence=IMP] [GO:0016230 "sphingomyelin
phosphodiesterase activator activity" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Pfam:PF02893 RGD:727868 GO:GO:0006917 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR004182 SMART:SM00568
Gene3D:1.10.1540.10 Gene3D:2.30.29.40 InterPro:IPR000409
InterPro:IPR023362 Pfam:PF02138 SMART:SM01026 SUPFAM:SSF81837
PROSITE:PS50197 CTD:8439 HOGENOM:HOG000231605 HOVERGEN:HBG005639
OrthoDB:EOG4M91QQ EMBL:AY163240 IPI:IPI00327109 RefSeq:NP_852054.1
UniGene:Rn.229389 ProteinModelPortal:Q7TSY5 STRING:Q7TSY5
GeneID:353233 KEGG:rno:353233 UCSC:RGD:727868 InParanoid:Q7TSY5
NextBio:672623 Genevestigator:Q7TSY5 GO:GO:0016230 Uniprot:Q7TSY5
Length = 920
Score = 173 (66.0 bits), Expect = 7.0e-12, P = 7.0e-12
Identities = 48/165 (29%), Positives = 83/165 (50%)
Query: 61 EISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKD 120
E+ + ++N + ++ + V+ +K+G + +WD +A + I GT A F+ D
Sbjct: 762 ELEHDVSVNTINLNAVSTLLVSGTKEGLVNIWDLTTATLLHQISCHSGTV--CDAAFSPD 819
Query: 121 QRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVI 180
R VLS G D + + +V +G L+ + + Q F V++ V+S + E+++
Sbjct: 820 SRHVLSTGVDGCLNVIDVQTGMLISS-MASEEPQRCF--VWDGNS--VVS-GSRTGELLV 873
Query: 181 WDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
WD L A KV++ H GA I + ++ IT G DR V FWK
Sbjct: 874 WDLLGA-KVSERIQGHTGAVTCIRMNEQCSSIITGGEDRQVMFWK 917
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 168 (64.2 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 42/157 (26%), Positives = 78/157 (49%)
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
+ +++S G + +AS+D +RLW + S AH TA S +F+ D +F+++
Sbjct: 63 VTSLQFSPQGNLLASASRDKTVRLWV-LDRKGKSSEFKAH-TAPVRSVDFSADGQFLVTA 120
Query: 128 GKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE 187
+D ++K+W + R + TH +R A F+ ++S E I IWD + +
Sbjct: 121 SEDKSIKVWSMYRQRFLYSLYRHTHW-VRC-AKFSPDGRLIVSCSEDKT-IKIWDTTSKQ 177
Query: 188 KVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
V +S + +G +++ SP + G+D +VR W
Sbjct: 178 CVNNFSDS-VGFANFVDFSPNGTCIASAGSDHAVRIW 213
Score = 147 (56.8 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 48/213 (22%), Positives = 93/213 (43%)
Query: 11 RAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGA-IN 69
RA+R + V S+ F P G+ L + + L+ ++ E + A +
Sbjct: 52 RAYRYVGHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDR-----KGKSSEFKAHTAPVR 106
Query: 70 QVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGK 129
V +S+ G VTAS+D +I++W + S+ H T A F+ D R ++SC +
Sbjct: 107 SVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLY-RH-THWVRCAKFSPDGRLIVSCSE 164
Query: 130 DSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKV 189
D T+K+W+ +S + V + + F F+ + S + + IWD + ++
Sbjct: 165 DKTIKIWDTTSKQCVNNFSDSVGFA-NF-VDFSPNGTCIASAGS-DHAVRIWD-IRMNRL 220
Query: 190 AKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVR 222
+ H + P+ + +T +D +V+
Sbjct: 221 LQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVK 253
Score = 132 (51.5 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 42/169 (24%), Positives = 74/169 (43%)
Query: 13 FRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVR 72
+ + + TH VR F P G +++ ++ ++D + QC N + SV G N V
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCV--NNFSD-SV-GFANFVD 193
Query: 73 YSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDST 132
+S G +A D A+R+WD + N + H +F +++ D T
Sbjct: 194 FSPNGTCIASAGSDHAVRIWD-IRMNRLLQHYQVHSCG-VNCLSFHPSGNSLVTASSDGT 251
Query: 133 VKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
VK+ ++ GRL+ G HT F F+ E S + ++++W
Sbjct: 252 VKILDLVEGRLIYTLQG--HTGPVFTVSFSKDGELFTSGGADA-QVLVW 297
Score = 119 (46.9 bits), Expect = 0.00011, P = 0.00011
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 8 TAKRAFRVIQDTHNVRS-VSFHPSGDFLL-AGTDHPIAHLYDVNTFQCYLSANVPEISVN 65
T+K+ D+ + V F P+G + AG+DH + ++D+ + V VN
Sbjct: 174 TSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAV-RIWDIRMNRLLQHYQVHSCGVN 232
Query: 66 GAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVL 125
+ + +G VTAS DG +++ D V + ++ G H T + +F+KD
Sbjct: 233 C----LSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQG-H-TGPVFTVSFSKDGELFT 286
Query: 126 SCGKDSTVKLWEVS 139
S G D+ V +W S
Sbjct: 287 SGGADAQVLVWRTS 300
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 171 (65.3 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 51/171 (29%), Positives = 77/171 (45%)
Query: 20 HN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTG 77
HN V F P G + ++G +A L+ + +Q L ++ +N RY
Sbjct: 585 HNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQP-LRIFAGHLA---DVNCTRYHPNS 640
Query: 78 GMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWE 137
T S D +RLWD ++ NCVR G G S F+ + RF+ + D V LW+
Sbjct: 641 NYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIH--SLTFSPNGRFLATGATDGRVLLWD 698
Query: 138 VSSGRLVKQYLGATHT--QLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTA 186
+ G +V + G T T LRF D E +L+ N + +WDA+ A
Sbjct: 699 IGHGLMVGELKGHTDTVCSLRFS---RDGE--ILASGSMDNTVRLWDAVKA 744
Score = 134 (52.2 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 46/207 (22%), Positives = 82/207 (39%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
V SF P ++LL+ ++ L+ + TF C + N + ++S G +V
Sbjct: 547 VYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYK----GHNYPVWDTQFSPYGYYFV 602
Query: 82 TASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSG 141
+ D RLW +R G H A+ + + +V + D TV+LW+V +G
Sbjct: 603 SGGHDRVARLWATDHYQPLRIFAG-H-LADVNCTRYHPNSNYVATGSADRTVRLWDVLNG 660
Query: 142 RLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPR 201
V+ + G H F+ F L+ +++WD V + H
Sbjct: 661 NCVRIFTG--HKGPIHSLTFSPNGRF-LATGATDGRVLLWDIGHGLMVGELKG-HTDTVC 716
Query: 202 WIEHSPAEAAFITCGT-DRSVRFWKEI 227
+ S + + G+ D +VR W +
Sbjct: 717 SLRFS-RDGEILASGSMDNTVRLWDAV 742
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 171 (65.3 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 57/221 (25%), Positives = 98/221 (44%)
Query: 10 KRAFRVIQD--TH----NVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEIS 63
KRA++ +Q+ H N + S + G DH + +L+ + LS
Sbjct: 4 KRAYK-LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKV-NLWAIGKPNAILSL----YG 57
Query: 64 VNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRF 123
+ I+ V + ++ G+ + G I+LWD A VR++ G H + S NF F
Sbjct: 58 HSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTG-H-RSNCVSVNFHPFGEF 115
Query: 124 VLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDA 183
S D+ +K+W++ + Y G HT+ F +++S E N + +WD
Sbjct: 116 FASGSLDTNLKIWDIRKKGCIHTYKG--HTRGVNVLRFTPDGRWIVSGGE-DNVVKVWD- 171
Query: 184 LTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
LTA K+ +H G + ++ P E T D++V+FW
Sbjct: 172 LTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFW 212
Score = 165 (63.1 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 50/210 (23%), Positives = 94/210 (44%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAIN--QVRYSSTGGM 79
+ SV+F S + AG L+D+ A V N V + G
Sbjct: 62 IDSVTFDASEGLVAAGAASGTIKLWDLE------EAKVVRTLTGHRSNCVSVNFHPFGEF 115
Query: 80 YVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVS 139
+ + S D +++WD C+ + G H T FT D R+++S G+D+ VK+W+++
Sbjct: 116 FASGSLDTNLKIWDIRKKGCIHTYKG-H-TRGVNVLRFTPDGRWIVSGGEDNVVKVWDLT 173
Query: 140 SGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGA 199
+G+L+ ++ +H + + Q++ EF+L+ + WD T E + + G
Sbjct: 174 AGKLLHEF--KSH-EGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGV 230
Query: 200 PRWIEHSPAEAAFITCGTDRSVRF--WKEI 227
R + +P + + CG S++ W+ I
Sbjct: 231 -RCLTFNP-DGKSVLCGLQESLKIFSWEPI 258
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 167 (63.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 57/218 (26%), Positives = 97/218 (44%)
Query: 7 ATAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNG 66
A RAFR + T + V+F PSG + + + L+ T + V +
Sbjct: 48 APKARAFRFVGHTDVITGVNFAPSGSLVASSSRDQTVRLW---TPSIKGESTVFKAHT-A 103
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLS 126
++ V +S G VTAS D ++++W GV + H T A F+ D R + S
Sbjct: 104 SVRSVHFSRDGQRLVTASDDKSVKVW-GVERKKFLYSLNRH-TNWVRCARFSPDGRLIAS 161
Query: 127 CGKDSTVKLWEVSSGRLVKQYL--GATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDAL 184
CG D TV+LW+ SS + + + G + T + F N + + S N I IWD
Sbjct: 162 CGDDRTVRLWDTSSHQCINIFTDYGGSATFVDF----NSSGTCIAS-SGADNTIKIWDIR 216
Query: 185 TAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVR 222
T + + + ++ G + H P+ I+ +D +++
Sbjct: 217 TNKLIQHYKVHNAGVNCFSFH-PSGNYLISGSSDSTIK 253
Score = 129 (50.5 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 33/157 (21%), Positives = 75/157 (47%)
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
I V ++ +G + ++S+D +RLW S ++ AH TA S +F++D + +++
Sbjct: 63 ITGVNFAPSGSLVASSSRDQTVRLWTP-SIKGESTVFKAH-TASVRSVHFSRDGQRLVTA 120
Query: 128 GKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE 187
D +VK+W V + + Y HT A F+ + S + + +WD ++
Sbjct: 121 SDDKSVKVWGVERKKFL--YSLNRHTNWVRCARFSPDGRLIASCGD-DRTVRLWDT-SSH 176
Query: 188 KVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+ +++ G+ +++ + + + G D +++ W
Sbjct: 177 QCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIW 213
Score = 118 (46.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 33/135 (24%), Positives = 62/135 (45%)
Query: 10 KRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAIN 69
K + + + T+ VR F P G + + D L+D ++ QC N+ G+
Sbjct: 135 KFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCI---NI-FTDYGGSAT 190
Query: 70 QVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGK 129
V ++S+G ++ D I++WD + N + H A +F +++S
Sbjct: 191 FVDFNSSGTCIASSGADNTIKIWD-IRTNKLIQHYKVHN-AGVNCFSFHPSGNYLISGSS 248
Query: 130 DSTVKLWEVSSGRLV 144
DST+K+ ++ GRL+
Sbjct: 249 DSTIKILDLLEGRLI 263
Score = 114 (45.2 bits), Expect = 0.00045, P = 0.00045
Identities = 42/146 (28%), Positives = 61/146 (41%)
Query: 82 TASKDGAIRLWD-GVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVS- 139
T S D ++ +W+ A R VG H T T NF V S +D TV+LW S
Sbjct: 35 TGSCDKSLMIWNLAPKARAFR-FVG-H-TDVITGVNFAPSGSLVASSSRDQTVRLWTPSI 91
Query: 140 SGRLVKQYLGATHT-QLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIG 198
G + + HT +R D + V + D+ S + +W + +K + H
Sbjct: 92 KG---ESTVFKAHTASVRSVHFSRDGQRLVTASDDKS--VKVW-GVERKKFLYSLNRHTN 145
Query: 199 APRWIEHSPAEAAFITCGTDRSVRFW 224
R SP +CG DR+VR W
Sbjct: 146 WVRCARFSPDGRLIASCGDDRTVRLW 171
Score = 36 (17.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 151 THTQLRFQAVFNDTEEFVLSID-EPSNEIVIWDALTA 186
THTQ R + N E F + P+ I +LT+
Sbjct: 395 THTQAREEEDENQEERFAGGMTASPAERSGIPSSLTS 431
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 167 (63.8 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 50/171 (29%), Positives = 77/171 (45%)
Query: 20 HN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTG 77
HN V F P G + ++G +A L+ + +Q L ++ +N R+
Sbjct: 344 HNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQP-LRIFAGHLA---DVNCTRFHPNS 399
Query: 78 GMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWE 137
T S D +RLWD ++ NCVR G G S F+ + RF+ + D V LW+
Sbjct: 400 NYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIH--SLTFSPNGRFLATGATDGRVLLWD 457
Query: 138 VSSGRLVKQYLGATHT--QLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTA 186
+ G +V + G T T LRF D E +L+ N + +WDA+ A
Sbjct: 458 IGHGLMVGELKGHTDTVCSLRFS---RDGE--ILASGSMDNTVRLWDAVKA 503
Score = 137 (53.3 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 47/207 (22%), Positives = 82/207 (39%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
V SF P ++LL+ ++ L+ + TF C + N + ++S G +V
Sbjct: 306 VYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYK----GHNYPVWDTQFSPYGYYFV 361
Query: 82 TASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSG 141
+ D RLW +R G H A+ F + +V + D TV+LW+V +G
Sbjct: 362 SGGHDRVARLWATDHYQPLRIFAG-H-LADVNCTRFHPNSNYVATGSADRTVRLWDVLNG 419
Query: 142 RLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPR 201
V+ + G H F+ F L+ +++WD V + H
Sbjct: 420 NCVRIFTG--HKGPIHSLTFSPNGRF-LATGATDGRVLLWDIGHGLMVGELKG-HTDTVC 475
Query: 202 WIEHSPAEAAFITCGT-DRSVRFWKEI 227
+ S + + G+ D +VR W +
Sbjct: 476 SLRFS-RDGEILASGSMDNTVRLWDAV 501
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 170 (64.9 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 50/207 (24%), Positives = 93/207 (44%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQ---CYLSANVPEISVNGAINQVRYSSTGG 78
V SF P +LL+ ++ A L+ + T CY N P + V +S G
Sbjct: 682 VYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFP-------VWDVSFSPFGF 734
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
+ TAS D RLW + +R G H ++ + F + ++ + D + +LWE+
Sbjct: 735 YFATASHDRTARLWTTNHISPLRIFTG-H-LSDCNTVRFHPNINYLATGSNDKSARLWEI 792
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIG 198
+G+ V+ ++G H + F+ + + E ++ +++WD T +KV K H
Sbjct: 793 QTGKCVRIFMG--HRAPIYTVAFSPDGRLLATAGEDTS-VILWDLSTGKKVKKMDG-HTK 848
Query: 199 APRWIEHSPAEAAFITCGT-DRSVRFW 224
++ S + + + G+ D +VR W
Sbjct: 849 CVYSLDFS-CDGSILASGSSDCTVRLW 874
Score = 147 (56.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 49/169 (28%), Positives = 77/169 (45%)
Query: 20 HN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTG 77
HN V VSF P G + + A L+ N L +S N VR+
Sbjct: 720 HNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISP-LRIFTGHLS---DCNTVRFHPNI 775
Query: 78 GMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWE 137
T S D + RLW+ + CVR +G H T A F+ D R + + G+D++V LW+
Sbjct: 776 NYLATGSNDKSARLWEIQTGKCVRIFMG-HRAPIYTVA-FSPDGRLLATAGEDTSVILWD 833
Query: 138 VSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTA 186
+S+G+ VK+ G HT+ + F+ + +L+ + +WD A
Sbjct: 834 LSTGKKVKKMDG--HTKCVYSLDFS-CDGSILASGSSDCTVRLWDVKKA 879
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 168 (64.2 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 50/171 (29%), Positives = 77/171 (45%)
Query: 20 HN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTG 77
HN V F P G + ++G +A L+ + +Q L ++ +N R+
Sbjct: 582 HNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQP-LRIFAGHLA---DVNCTRFHPNS 637
Query: 78 GMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWE 137
T S D +RLWD ++ NCVR G G S F+ + RF+ + D V LW+
Sbjct: 638 NYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIH--SLTFSPNGRFLATGATDGRVLLWD 695
Query: 138 VSSGRLVKQYLGATHT--QLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTA 186
+ G +V + G T T LRF D E +L+ N + +WDA+ A
Sbjct: 696 IGHGLMVGELKGHTDTVCSLRFS---RDGE--ILASGSMDNTVRLWDAIKA 741
Score = 138 (53.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 48/207 (23%), Positives = 82/207 (39%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
V SF P ++LL+ ++ L+ + TF C + N + ++S G +V
Sbjct: 544 VYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYK----GHNYPVWDTQFSPYGYYFV 599
Query: 82 TASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSG 141
+ D RLW +R G H A+ F + +V + D TV+LW+V +G
Sbjct: 600 SGGHDRVARLWATDHYQPLRIFAG-H-LADVNCTRFHPNSNYVATGSADRTVRLWDVLNG 657
Query: 142 RLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPR 201
V+ + G H F+ F L+ +++WD V + H
Sbjct: 658 NCVRIFTG--HKGPIHSLTFSPNGRF-LATGATDGRVLLWDIGHGLMVGELKG-HTDTVC 713
Query: 202 WIEHSPAEAAFITCGT-DRSVRFWKEI 227
+ S + + G+ D +VR W I
Sbjct: 714 SLRFS-RDGEILASGSMDNTVRLWDAI 739
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 168 (64.2 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 50/171 (29%), Positives = 77/171 (45%)
Query: 20 HN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTG 77
HN V F P G + ++G +A L+ + +Q L ++ +N R+
Sbjct: 584 HNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQP-LRIFAGHLA---DVNCTRFHPNS 639
Query: 78 GMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWE 137
T S D +RLWD ++ NCVR G G S F+ + RF+ + D V LW+
Sbjct: 640 NYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIH--SLTFSPNGRFLATGATDGRVLLWD 697
Query: 138 VSSGRLVKQYLGATHT--QLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTA 186
+ G +V + G T T LRF D E +L+ N + +WDA+ A
Sbjct: 698 IGHGLMVGELKGHTDTVCSLRFS---RDGE--ILASGSMDNTVRLWDAIKA 743
Score = 138 (53.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 48/207 (23%), Positives = 82/207 (39%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
V SF P ++LL+ ++ L+ + TF C + N + ++S G +V
Sbjct: 546 VYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYK----GHNYPVWDTQFSPYGYYFV 601
Query: 82 TASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSG 141
+ D RLW +R G H A+ F + +V + D TV+LW+V +G
Sbjct: 602 SGGHDRVARLWATDHYQPLRIFAG-H-LADVNCTRFHPNSNYVATGSADRTVRLWDVLNG 659
Query: 142 RLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPR 201
V+ + G H F+ F L+ +++WD V + H
Sbjct: 660 NCVRIFTG--HKGPIHSLTFSPNGRF-LATGATDGRVLLWDIGHGLMVGELKG-HTDTVC 715
Query: 202 WIEHSPAEAAFITCGT-DRSVRFWKEI 227
+ S + + G+ D +VR W I
Sbjct: 716 SLRFS-RDGEILASGSMDNTVRLWDAI 741
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 167 (63.8 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 54/203 (26%), Positives = 87/203 (42%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
V S SF P +LL+G++ L+ ++T +S N + V +S G +
Sbjct: 528 VYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYK----GHNHPVWDVSFSPLGHYFA 583
Query: 82 TASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSG 141
TAS D RLW +R G + S F + +V + D T ++W+VS+G
Sbjct: 584 TASHDQTARLWSCDHIYPLRIFAGHLNDVDCVS--FHPNGCYVFTGSSDKTCRMWDVSTG 641
Query: 142 RLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPR 201
V+ +LG T + AV D LS I +WD T +++ + + A
Sbjct: 642 DSVRLFLGHTAPVISI-AVCPDGRW--LSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIY 698
Query: 202 WIEHSPAEAAFITCGTDRSVRFW 224
+ +S I+ G D +VR W
Sbjct: 699 SLSYSKEGNVLISGGADHTVRVW 721
Score = 143 (55.4 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 36/122 (29%), Positives = 65/122 (53%)
Query: 20 HNVRSVSFHPSGDFLLAGTDHPIAHLYDVNT---FQCYLSANVPEISVNGAINQVRYSST 76
++V VSFHP+G ++ G+ ++DV+T + +L P IS+ R+ ST
Sbjct: 610 NDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISI-AVCPDGRWLST 668
Query: 77 GGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLW 136
G S+DG I +WD + ++ + G HG S +++K+ ++S G D TV++W
Sbjct: 669 G------SEDGIINVWDIGTGKRLKQMRG-HGKNAIYSLSYSKEGNVLISGGADHTVRVW 721
Query: 137 EV 138
++
Sbjct: 722 DL 723
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 167 (63.8 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 50/171 (29%), Positives = 77/171 (45%)
Query: 20 HN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTG 77
HN V F P G + ++G +A L+ + +Q L ++ +N R+
Sbjct: 584 HNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQP-LRIFAGHLA---DVNCTRFHPNS 639
Query: 78 GMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWE 137
T S D +RLWD ++ NCVR G G S F+ + RF+ + D V LW+
Sbjct: 640 NYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIH--SLTFSPNGRFLATGATDGRVLLWD 697
Query: 138 VSSGRLVKQYLGATHT--QLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTA 186
+ G +V + G T T LRF D E +L+ N + +WDA+ A
Sbjct: 698 IGHGLMVGELKGHTDTVCSLRFS---RDGE--ILASGSMDNTVRLWDAVKA 743
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 47/207 (22%), Positives = 82/207 (39%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
V SF P ++LL+ ++ L+ + TF C + N + ++S G +V
Sbjct: 546 VYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYK----GHNYPVWDTQFSPYGYYFV 601
Query: 82 TASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSG 141
+ D RLW +R G H A+ F + +V + D TV+LW+V +G
Sbjct: 602 SGGHDRVARLWATDHYQPLRIFAG-H-LADVNCTRFHPNSNYVATGSADRTVRLWDVLNG 659
Query: 142 RLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPR 201
V+ + G H F+ F L+ +++WD V + H
Sbjct: 660 NCVRIFTG--HKGPIHSLTFSPNGRF-LATGATDGRVLLWDIGHGLMVGELKG-HTDTVC 715
Query: 202 WIEHSPAEAAFITCGT-DRSVRFWKEI 227
+ S + + G+ D +VR W +
Sbjct: 716 SLRFS-RDGEILASGSMDNTVRLWDAV 741
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 167 (63.8 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 50/171 (29%), Positives = 77/171 (45%)
Query: 20 HN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTG 77
HN V F P G + ++G +A L+ + +Q L ++ +N R+
Sbjct: 585 HNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQP-LRIFAGHLA---DVNCTRFHPNS 640
Query: 78 GMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWE 137
T S D +RLWD ++ NCVR G G S F+ + RF+ + D V LW+
Sbjct: 641 NYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIH--SLTFSPNGRFLATGATDGRVLLWD 698
Query: 138 VSSGRLVKQYLGATHT--QLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTA 186
+ G +V + G T T LRF D E +L+ N + +WDA+ A
Sbjct: 699 IGHGLMVGELKGHTDTVCSLRFS---RDGE--ILASGSMDNTVRLWDAVKA 744
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 47/207 (22%), Positives = 82/207 (39%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
V SF P ++LL+ ++ L+ + TF C + N + ++S G +V
Sbjct: 547 VYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYK----GHNYPVWDTQFSPYGYYFV 602
Query: 82 TASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSG 141
+ D RLW +R G H A+ F + +V + D TV+LW+V +G
Sbjct: 603 SGGHDRVARLWATDHYQPLRIFAG-H-LADVNCTRFHPNSNYVATGSADRTVRLWDVLNG 660
Query: 142 RLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPR 201
V+ + G H F+ F L+ +++WD V + H
Sbjct: 661 NCVRIFTG--HKGPIHSLTFSPNGRF-LATGATDGRVLLWDIGHGLMVGELKG-HTDTVC 716
Query: 202 WIEHSPAEAAFITCGT-DRSVRFWKEI 227
+ S + + G+ D +VR W +
Sbjct: 717 SLRFS-RDGEILASGSMDNTVRLWDAV 742
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 166 (63.5 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 51/204 (25%), Positives = 90/204 (44%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPE-ISVNGAINQVRYSSTGGMY 80
+ SV F PSG L + L++ C A + + V++S G +
Sbjct: 21 ITSVDFSPSGKQLATASWDTFLMLWN-----CKPQARAFRYVGHKDVVTSVQFSPLGNLL 75
Query: 81 VTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSS 140
+AS+D +RLW S AH TA S +F+ D +F+ + +D ++K+W +
Sbjct: 76 ASASRDRTVRLWIPDKRG-KSSEFKAH-TAPVRSVDFSADGQFLATASEDKSIKVWNMYR 133
Query: 141 GRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAP 200
R + TH +R A F+ ++S E I IWD + V +S + +G
Sbjct: 134 QRFLYSLYRHTHW-VRC-AKFSPDGRLIVSCSEDKT-IKIWDTTNKQCVNNFSDS-VGFA 189
Query: 201 RWIEHSPAEAAFITCGTDRSVRFW 224
+++ +P + G+D +V+ W
Sbjct: 190 NFVDFNPNGTCIASAGSDHTVKIW 213
Score = 155 (59.6 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 51/213 (23%), Positives = 92/213 (43%)
Query: 11 RAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGA-IN 69
RAFR + V SV F P G+ L + + L+ + E + A +
Sbjct: 52 RAFRYVGHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDK-----RGKSSEFKAHTAPVR 106
Query: 70 QVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGK 129
V +S+ G TAS+D +I++W+ + S+ H T A F+ D R ++SC +
Sbjct: 107 SVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLY-RH-THWVRCAKFSPDGRLIVSCSE 164
Query: 130 DSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKV 189
D T+K+W+ ++ + V + + F FN + S + + IWD + K+
Sbjct: 165 DKTIKIWDTTNKQCVNNFSDSVGFA-NF-VDFNPNGTCIASAGS-DHTVKIWD-IRVNKL 220
Query: 190 AKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVR 222
+ H G + P+ IT +D +++
Sbjct: 221 LQHYQVHSGGVNCVSFHPSGNYIITASSDGTLK 253
Score = 141 (54.7 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 46/207 (22%), Positives = 86/207 (41%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T VRSV F G FL ++ ++++ Q +L + + ++S G
Sbjct: 102 TAPVRSVDFSADGQFLATASEDKSIKVWNMYR-QRFLYSLYRHTHW---VRCAKFSPDGR 157
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
+ V+ S+D I++WD + CV + + G A +F + + S G D TVK+W++
Sbjct: 158 LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFV--DFNPNGTCIASAGSDHTVKIWDI 215
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIG 198
+L++ Y H+ F+ + ++++ + I D L + H G
Sbjct: 216 RVNKLLQHY--QVHSGGVNCVSFHPSGNYIITASSDGT-LKILDLLEGRLIYTLQG-HTG 271
Query: 199 APRWIEHSPAEAAFITCGTDRSVRFWK 225
+ S F + G D V W+
Sbjct: 272 PVFTVSFSKGGELFSSGGADTQVLLWR 298
Score = 129 (50.5 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 38/169 (22%), Positives = 74/169 (43%)
Query: 13 FRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVR 72
+ + + TH VR F P G +++ ++ ++D QC N + SV G N V
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCV--NNFSD-SV-GFANFVD 193
Query: 73 YSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDST 132
++ G +A D +++WD + N + H + +F ++++ D T
Sbjct: 194 FNPNGTCIASAGSDHTVKIWD-IRVNKLLQHYQVH-SGGVNCVSFHPSGNYIITASSDGT 251
Query: 133 VKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
+K+ ++ GRL+ G HT F F+ E + S ++++W
Sbjct: 252 LKILDLLEGRLIYTLQG--HTGPVFTVSFSKGGE-LFSSGGADTQVLLW 297
Score = 116 (45.9 bits), Expect = 0.00025, P = 0.00025
Identities = 31/116 (26%), Positives = 57/116 (49%)
Query: 25 VSFHPSGDFLL-AGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTA 83
V F+P+G + AG+DH + ++D+ + V +G +N V + +G +TA
Sbjct: 192 VDFNPNGTCIASAGSDHTVK-IWDIRVNKLLQHYQVH----SGGVNCVSFHPSGNYIITA 246
Query: 84 SKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVS 139
S DG +++ D + + ++ G H T + +F+K S G D+ V LW +
Sbjct: 247 SSDGTLKILDLLEGRLIYTLQG-H-TGPVFTVSFSKGGELFSSGGADTQVLLWRTN 300
>DICTYBASE|DDB_G0289711 [details] [associations]
symbol:morg1 "mitogen-activated protein kinase
organizer 1" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0289711 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000148 HSSP:P16649 KO:K13124
RefSeq:XP_636074.1 ProteinModelPortal:Q54H44
EnsemblProtists:DDB0233741 GeneID:8627284 KEGG:ddi:DDB_G0289711
OMA:CKQGAVR Uniprot:Q54H44
Length = 325
Score = 165 (63.1 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 45/159 (28%), Positives = 81/159 (50%)
Query: 69 NQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQR-FVLSC 127
N ++ T +T+S DG IR +D V ++V T +S + TKD++ F+ SC
Sbjct: 172 NNQPHTHTQKEVITSSVDGCIRTYD-VRMG---TLVTYEDTIPISSVSITKDKKCFIASC 227
Query: 128 GKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE 187
D TVKL ++ S +K+Y G + + + N + ++S E N+ I++ L+ +
Sbjct: 228 -TDETVKLIDIDSYETLKEYKGHKNKVYKINSCSNFDDSLIISGSE-DNDFYIYELLSGK 285
Query: 188 KVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWKE 226
++K S H ++ P++ FIT TD ++R W +
Sbjct: 286 LLSKLSG-HSNIITHVDSHPSKNQFITSSTDCTIRIWDQ 323
>DICTYBASE|DDB_G0289501 [details] [associations]
symbol:cdc40 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0006260 "DNA
replication" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0289501 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681
GenomeReviews:CM000154_GR GO:GO:0003676 EMBL:AAFI02000141
GO:GO:0000084 GO:GO:0000398 KO:K12816 OMA:KRQKRGK
RefSeq:XP_636182.1 ProteinModelPortal:Q54HF5 STRING:Q54HF5
EnsemblProtists:DDB0233421 GeneID:8627169 KEGG:ddi:DDB_G0289501
InParanoid:Q54HF5 ProtClustDB:CLSZ2429764 Uniprot:Q54HF5
Length = 595
Score = 166 (63.5 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 39/157 (24%), Positives = 75/157 (47%)
Query: 71 VRY-SSTGGMYVTASKDGAIRLWDGVS-ANCVRSIVGAHGTAEATSANFTKDQRFVLSCG 128
+RY G + ++A D +++WD C+++ +G H A F+ D R LSCG
Sbjct: 310 IRYIPKYGHLLLSAGMDNTVKIWDAYGDRRCIQTYMG-HSQA-VRDICFSNDGRRFLSCG 367
Query: 129 KDSTVKLWEVSSGRLVKQYL-GATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE 187
D +LW+ +G+++ + G ++F + E+F+ + +I+ WD + +
Sbjct: 368 YDRQTRLWDTETGKILSSFTNGKIPYCIKFNPDDDKQEQFLCGGSD--KKIIQWD-IKSN 424
Query: 188 KVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
++ + H+GA I F+T D+S+R W
Sbjct: 425 QIVQEYDQHLGAVNTITFLDDNRRFVTSSDDKSLRVW 461
Score = 118 (46.6 bits), Expect = 0.00020, P = 0.00020
Identities = 50/210 (23%), Positives = 92/210 (43%)
Query: 25 VSFHPSGD----FLLAGTDHPIAHLYDVNTFQCYLSANVPEISVN-GAINQVRYSSTGGM 79
+ F+P D FL G+D I +D+ + Q V E + GA+N + +
Sbjct: 395 IKFNPDDDKQEQFLCGGSDKKIIQ-WDIKSNQI-----VQEYDQHLGAVNTITFLDDNRR 448
Query: 80 YVTASKDGAIRLWD-GVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
+VT+S D ++R+WD G+ ++ I + A K + F D+ + ++
Sbjct: 449 FVTSSDDKSLRVWDWGIPV-VIKYISDPSMHSMPAVALHPKGKWFAAQ-SLDNQILIYSA 506
Query: 139 SSG-RL--VKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSN 195
R+ K++LG + Q F+ +F+ S D + + WD T+ K+ K +
Sbjct: 507 RDRFRMNKKKRFLGHNVSGYACQLGFSPDGKFIYSGDS-TGKAFFWDWKTS-KIIKTINA 564
Query: 196 HIGAPRWIEHSPAEAAFI-TCGTDRSVRFW 224
H IE +P E + + TC + ++ W
Sbjct: 565 HNNVCIGIEWAPLEPSKVATCSWNNEIKLW 594
Score = 113 (44.8 bits), Expect = 0.00077, P = 0.00077
Identities = 42/171 (24%), Positives = 80/171 (46%)
Query: 19 THNVRSVSFHPS-GDFLL-AGTDHPIAHLYDV-NTFQCYLSANVPEISVNGAINQVRYSS 75
T V ++ + P G LL AG D+ + ++D +C + + + A+ + +S+
Sbjct: 304 TKGVAAIRYIPKYGHLLLSAGMDNTVK-IWDAYGDRRCIQTY----MGHSQAVRDICFSN 358
Query: 76 TGGMYVTASKDGAIRLWDGVSANCVRSIV-GAHGTAEATSANFTKDQRFVLSCGKDSTVK 134
G +++ D RLWD + + S G + + K ++F+ G D +
Sbjct: 359 DGRRFLSCGYDRQTRLWDTETGKILSSFTNGKIPYCIKFNPDDDKQEQFLCG-GSDKKII 417
Query: 135 LWEVSSGRLVKQY---LGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWD 182
W++ S ++V++Y LGA +T + F +D FV S D+ S + +WD
Sbjct: 418 QWDIKSNQIVQEYDQHLGAVNT-ITF---LDDNRRFVTSSDDKS--LRVWD 462
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 165 (63.1 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 54/207 (26%), Positives = 90/207 (43%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T VRSV F G L+ +D ++ + Q +L + I+ + R+S G
Sbjct: 103 TATVRSVHFCSDGQSLVTASDDKTVKVWSTHR-QKFLFSLSQHINW---VRCARFSPDGR 158
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
+ V+AS D ++LWD S CV S HG T +F + + D+TVK+W+V
Sbjct: 159 LIVSASDDKTVKLWDKTSRECVHSYC-EHG-GFVTYVDFHPSGTCIAAASMDNTVKVWDV 216
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIG 198
+ RL++ Y H+ F+ + ++L+ S + I D + ++ H G
Sbjct: 217 RTHRLLQHY--QLHSAAVNALSFHPSGNYLLTASSDST-LKILDLMEG-RLLYTLHGHQG 272
Query: 199 APRWIEHSPAEAAFITCGTDRSVRFWK 225
+ S F + G+D V WK
Sbjct: 273 PATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 139 (54.0 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 52/214 (24%), Positives = 87/214 (40%)
Query: 11 RAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQ 70
RA+R V V+F PSG L +G+ ++ N + + +
Sbjct: 53 RAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNV----KGESTVFRAHTATVRS 108
Query: 71 VRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKD 130
V + S G VTAS D +++W + S+ H A F+ D R ++S D
Sbjct: 109 VHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSL-SQH-INWVRCARFSPDGRLIVSASDD 166
Query: 131 STVKLWEVSSGRLVKQYL--GATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEK 188
TVKLW+ +S V Y G T + F + T S+D N + +WD T +
Sbjct: 167 KTVKLWDKTSRECVHSYCEHGGFVTYVDFHP--SGTCIAAASMD---NTVKVWDVRT-HR 220
Query: 189 VAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVR 222
+ + H A + P+ +T +D +++
Sbjct: 221 LLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLK 254
Score = 129 (50.5 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 40/172 (23%), Positives = 73/172 (42%)
Query: 10 KRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAIN 69
K F + Q + VR F P G +++ +D L+D + +C S G +
Sbjct: 136 KFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSY----CEHGGFVT 191
Query: 70 QVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGK 129
V + +G AS D +++WD V + + H A + +F ++L+
Sbjct: 192 YVDFHPSGTCIAAASMDNTVKVWD-VRTHRLLQHYQLHSAA-VNALSFHPSGNYLLTASS 249
Query: 130 DSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
DST+K+ ++ GRL+ G H F+ T E+ S ++++W
Sbjct: 250 DSTLKILDLMEGRLLYTLHG--HQGPATTVAFSRTGEYFAS-GGSDEQVMVW 298
Score = 127 (49.8 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 35/159 (22%), Positives = 69/159 (43%)
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLW-DGVSANCVRSIVGAHGTAEATSANFTKDQRFVL 125
A+ V +S +G + + S+D +R+W V ++ AH TA S +F D + ++
Sbjct: 63 AVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGES--TVFRAH-TATVRSVHFCSDGQSLV 119
Query: 126 SCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALT 185
+ D TVK+W + + + + H A F+ ++S + + +WD +
Sbjct: 120 TASDDKTVKVWSTHRQKFL--FSLSQHINWVRCARFSPDGRLIVSASDDKT-VKLWDKTS 176
Query: 186 AEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
E V + H G +++ P+ D +V+ W
Sbjct: 177 RECVHSYCE-HGGFVTYVDFHPSGTCIAAASMDNTVKVW 214
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 165 (63.1 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 58/204 (28%), Positives = 91/204 (44%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
V SV+F P G L +G+ L+D T C L + S N + V +S G +
Sbjct: 158 VLSVAFSPDGQLLASGSAEKTIKLWDSAT--CGLKHTLGGHS-NWVLPLV-FSPDGRLLA 213
Query: 82 TASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSG 141
+ S D I+LWD S + ++ G E+ + F+ + + + S D+T+KLW+ ++G
Sbjct: 214 SGSNDATIKLWDPPSGSLKHTLEGHSNKIESLA--FSPNGQLLASGSSDATIKLWDTATG 271
Query: 142 RLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPR 201
G H+ + VF+ + +L N I +WD T + K S G R
Sbjct: 272 SFRHTLKG--HSDMVLSVVFSPDSQ-LLESGSGDNTIKLWDPATG--ILKHSMRTPGIVR 326
Query: 202 WIEHSPAEAAFIT-CGTDRSVRFW 224
IE S IT GT S++ W
Sbjct: 327 SIEFSIELPQLITNLGTF-SIQAW 349
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 164 (62.8 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 56/201 (27%), Positives = 93/201 (46%)
Query: 27 FHPSGDFLL-AGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTASK 85
FHP+G L AG D I L++V C A + S GA+ ++ Y++ G M +AS
Sbjct: 75 FHPNGSTLASAGFDRLIL-LWNVYG-DCDNYATLKGHS--GAVMELHYNTDGSMLFSAST 130
Query: 86 DGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVK 145
D + +WD + V+ + G H + + + + V + D TVKLW++ V+
Sbjct: 131 DKTVAVWDSETGERVKRLKG-HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQ 189
Query: 146 QYLGATHTQLRFQAVFNDTEEFVLS--IDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWI 203
+ T+ L FNDT + ++S ID N+I +WD L K+ H + +
Sbjct: 190 TFQN-TYQVLA--VTFNDTSDQIISGGID---NDIKVWD-LRQNKLTYTMRGHADSVTGL 242
Query: 204 EHSPAEAAFITCGTDRSVRFW 224
S + ++ D +VR W
Sbjct: 243 SLSSEGSYLLSNAMDNTVRVW 263
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 164 (62.8 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 57/210 (27%), Positives = 92/210 (43%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVR---YSS 75
T VRSV F G + +D ++ + Q +L S++ IN VR +S
Sbjct: 134 TATVRSVHFCSDGQSFVTASDDKTIKVWSTHR-QKFL------FSLSQHINWVRCAKFSP 186
Query: 76 TGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKL 135
G + V+AS D ++LWD S CV S HG T +F V + G D+TVK+
Sbjct: 187 DGRLIVSASDDKTVKLWDKTSRECVHSYC-EHG-GFVTYVDFHPSGTCVAAAGMDNTVKV 244
Query: 136 WEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSN 195
W+V + RL++ Y H+ F+ + ++++ S + I D + ++
Sbjct: 245 WDVRTHRLLQHY--QLHSAAVNALSFHPSGNYLVTASSDST-LKILDLMEG-RLLYTLHG 300
Query: 196 HIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
H G + S F + G+D V WK
Sbjct: 301 HQGPATTVAFSRTGEYFASGGSDEQVMVWK 330
Score = 142 (55.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 53/215 (24%), Positives = 88/215 (40%)
Query: 11 RAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGA-IN 69
RA+R V V+F PSG L +G+ ++ N + + A +
Sbjct: 84 RAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPN-----IKGESTVFRAHTATVR 138
Query: 70 QVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGK 129
V + S G +VTAS D I++W + S+ H A F+ D R ++S
Sbjct: 139 SVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSL-SQH-INWVRCAKFSPDGRLIVSASD 196
Query: 130 DSTVKLWEVSSGRLVKQYL--GATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE 187
D TVKLW+ +S V Y G T + F + T +D N + +WD T
Sbjct: 197 DKTVKLWDKTSRECVHSYCEHGGFVTYVDFHP--SGTCVAAAGMD---NTVKVWDVRT-H 250
Query: 188 KVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVR 222
++ + H A + P+ +T +D +++
Sbjct: 251 RLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLK 285
Score = 129 (50.5 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 34/159 (21%), Positives = 69/159 (43%)
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLW-DGVSANCVRSIVGAHGTAEATSANFTKDQRFVL 125
A+ V +S +G + + S+D +R+W + ++ AH TA S +F D + +
Sbjct: 94 AVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGES--TVFRAH-TATVRSVHFCSDGQSFV 150
Query: 126 SCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALT 185
+ D T+K+W + + + + H A F+ ++S + + +WD +
Sbjct: 151 TASDDKTIKVWSTHRQKFL--FSLSQHINWVRCAKFSPDGRLIVSASDDKT-VKLWDKTS 207
Query: 186 AEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
E V + H G +++ P+ G D +V+ W
Sbjct: 208 RECVHSYCE-HGGFVTYVDFHPSGTCVAAAGMDNTVKVW 245
Score = 123 (48.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 38/172 (22%), Positives = 72/172 (41%)
Query: 10 KRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAIN 69
K F + Q + VR F P G +++ +D L+D + +C S G +
Sbjct: 167 KFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSY----CEHGGFVT 222
Query: 70 QVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGK 129
V + +G A D +++WD V + + H A + +F ++++
Sbjct: 223 YVDFHPSGTCVAAAGMDNTVKVWD-VRTHRLLQHYQLHSAA-VNALSFHPSGNYLVTASS 280
Query: 130 DSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
DST+K+ ++ GRL+ G H F+ T E+ S ++++W
Sbjct: 281 DSTLKILDLMEGRLLYTLHG--HQGPATTVAFSRTGEYFAS-GGSDEQVMVW 329
>MGI|MGI:1341864 [details] [associations]
symbol:Nsmaf "neutral sphingomyelinase (N-SMase) activation
associated factor" species:10090 "Mus musculus" [GO:0005123 "death
receptor binding" evidence=TAS] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0016230 "sphingomyelin
phosphodiesterase activator activity" evidence=ISO] [GO:0043085
"positive regulation of catalytic activity" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1341864 Pfam:PF02893 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 EMBL:CH466538 InterPro:IPR004182
SMART:SM00568 GO:GO:0005123 Gene3D:1.10.1540.10 Gene3D:2.30.29.40
InterPro:IPR000409 InterPro:IPR023362 Pfam:PF02138 SMART:SM01026
SUPFAM:SSF81837 PROSITE:PS50197 GeneTree:ENSGT00670000097747
EMBL:AL772306 CTD:8439 HOGENOM:HOG000231605 HOVERGEN:HBG005639
OMA:DKNRFQS OrthoDB:EOG4M91QQ ChiTaRS:NSMAF EMBL:AF013632
EMBL:BX510318 EMBL:BC145961 EMBL:BC145963 IPI:IPI00265718
RefSeq:NP_035075.2 UniGene:Mm.3059 ProteinModelPortal:O35242
SMR:O35242 STRING:O35242 PhosphoSite:O35242 PaxDb:O35242
PRIDE:O35242 Ensembl:ENSMUST00000029910 GeneID:18201 KEGG:mmu:18201
InParanoid:A2AKK1 NextBio:293572 Bgee:O35242 Genevestigator:O35242
GermOnline:ENSMUSG00000028245 Uniprot:O35242
Length = 920
Score = 166 (63.5 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 46/165 (27%), Positives = 82/165 (49%)
Query: 61 EISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKD 120
E+ + ++N + ++ + V+ +K+G + +WD +A + GT A F+ D
Sbjct: 762 ELEHDVSVNTINLNAVSTLLVSGTKEGMVNIWDLTTATLLHQTSCHSGTV--CDAAFSPD 819
Query: 121 QRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVI 180
R +LS G D + + +V +G L+ + + Q F V++ VLS S E+++
Sbjct: 820 SRHILSTGVDGCLNVIDVQTGMLISS-MASEEPQRCF--VWDGNS--VLS-GSRSGELLV 873
Query: 181 WDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
WD L A KV++ H GA + + ++ IT G DR + FWK
Sbjct: 874 WDLLGA-KVSERIQGHTGAVTCMWMNEQCSSIITGGEDRQIMFWK 917
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 164 (62.8 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 56/210 (26%), Positives = 92/210 (43%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVR---YSS 75
T VRSV F G + +D ++ + Q +L S++ IN VR +S
Sbjct: 103 TATVRSVHFCSDGQSFVTASDDKTVKVWSTHR-QKFL------FSLSQHINWVRCAKFSP 155
Query: 76 TGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKL 135
G + V+AS D ++LWD S CV S HG T +F + + G D+TVK+
Sbjct: 156 DGRLIVSASDDKTVKLWDKTSRECVHSYC-EHG-GFVTYVDFHPSGTCIAAAGMDNTVKV 213
Query: 136 WEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSN 195
W+V + RL++ Y H+ F+ + ++++ S + I D + ++
Sbjct: 214 WDVRTHRLLQHY--QLHSAAVNALSFHPSGNYLVTASSDST-LKILDLMEG-RLLYTLHG 269
Query: 196 HIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
H G + S F + G+D V WK
Sbjct: 270 HQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 140 (54.3 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 51/214 (23%), Positives = 87/214 (40%)
Query: 11 RAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQ 70
RA+R V V+F PSG L +G+ ++ N + + +
Sbjct: 53 RAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNV----KGESTVFRAHTATVRS 108
Query: 71 VRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKD 130
V + S G +VTAS D +++W + S+ H A F+ D R ++S D
Sbjct: 109 VHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSL-SQH-INWVRCAKFSPDGRLIVSASDD 166
Query: 131 STVKLWEVSSGRLVKQYL--GATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEK 188
TVKLW+ +S V Y G T + F + T +D N + +WD T +
Sbjct: 167 KTVKLWDKTSRECVHSYCEHGGFVTYVDFHP--SGTCIAAAGMD---NTVKVWDVRT-HR 220
Query: 189 VAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVR 222
+ + H A + P+ +T +D +++
Sbjct: 221 LLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLK 254
Score = 132 (51.5 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 36/159 (22%), Positives = 69/159 (43%)
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLW-DGVSANCVRSIVGAHGTAEATSANFTKDQRFVL 125
A+ V +S +G + + S+D +R+W V ++ AH TA S +F D + +
Sbjct: 63 AVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGES--TVFRAH-TATVRSVHFCSDGQSFV 119
Query: 126 SCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALT 185
+ D TVK+W + + + + H A F+ ++S + + +WD +
Sbjct: 120 TASDDKTVKVWSTHRQKFL--FSLSQHINWVRCAKFSPDGRLIVSASDDKT-VKLWDKTS 176
Query: 186 AEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
E V + H G +++ P+ G D +V+ W
Sbjct: 177 RECVHSYCE-HGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Score = 123 (48.4 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 38/172 (22%), Positives = 72/172 (41%)
Query: 10 KRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAIN 69
K F + Q + VR F P G +++ +D L+D + +C S G +
Sbjct: 136 KFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSY----CEHGGFVT 191
Query: 70 QVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGK 129
V + +G A D +++WD V + + H A + +F ++++
Sbjct: 192 YVDFHPSGTCIAAAGMDNTVKVWD-VRTHRLLQHYQLHSAA-VNALSFHPSGNYLVTASS 249
Query: 130 DSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
DST+K+ ++ GRL+ G H F+ T E+ S ++++W
Sbjct: 250 DSTLKILDLMEGRLLYTLHG--HQGPATTVAFSRTGEYFAS-GGSDEQVMVW 298
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 163 (62.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 55/201 (27%), Positives = 93/201 (46%)
Query: 27 FHPSGDFLL-AGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTASK 85
FHP+G L AG D I L++V C A + S GA+ ++ Y++ G M +AS
Sbjct: 74 FHPNGSTLASAGFDRLIL-LWNVYG-DCDNYATLKGHS--GAVMELHYNTDGSMLFSAST 129
Query: 86 DGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVK 145
D + +WD + V+ + G H + + + + V + D TVKLW++ ++
Sbjct: 130 DKTVAVWDSETGERVKRLKG-HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQ 188
Query: 146 QYLGATHTQLRFQAVFNDTEEFVLS--IDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWI 203
+ T+ L FNDT + ++S ID N+I +WD L K+ H + +
Sbjct: 189 TFQN-TYQVLA--VTFNDTSDQIISGGID---NDIKVWD-LRQNKLTYTMRGHADSVTGL 241
Query: 204 EHSPAEAAFITCGTDRSVRFW 224
S + ++ D +VR W
Sbjct: 242 SLSSEGSYLLSNAMDNTVRVW 262
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 163 (62.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 55/201 (27%), Positives = 93/201 (46%)
Query: 27 FHPSGDFLL-AGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTASK 85
FHP+G L AG D I L++V C A + S GA+ ++ Y++ G M +AS
Sbjct: 75 FHPNGSTLASAGFDRLIL-LWNVYG-DCDNYATLKGHS--GAVMELHYNTDGSMLFSAST 130
Query: 86 DGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVK 145
D + +WD + V+ + G H + + + + V + D TVKLW++ ++
Sbjct: 131 DKTVAVWDSETGERVKRLKG-HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQ 189
Query: 146 QYLGATHTQLRFQAVFNDTEEFVLS--IDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWI 203
+ T+ L FNDT + ++S ID N+I +WD L K+ H + +
Sbjct: 190 TFQN-TYQVLA--VTFNDTSDQIISGGID---NDIKVWD-LRQNKLTYTMRGHADSVTGL 242
Query: 204 EHSPAEAAFITCGTDRSVRFW 224
S + ++ D +VR W
Sbjct: 243 SLSSEGSYLLSNAMDNTVRVW 263
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 163 (62.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 55/201 (27%), Positives = 93/201 (46%)
Query: 27 FHPSGDFLL-AGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTASK 85
FHP+G L AG D I L++V C A + S GA+ ++ Y++ G M +AS
Sbjct: 75 FHPNGSTLASAGFDRLIL-LWNVYG-DCDNYATLKGHS--GAVMELHYNTDGSMLFSAST 130
Query: 86 DGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVK 145
D + +WD + V+ + G H + + + + V + D TVKLW++ ++
Sbjct: 131 DKTVAVWDSETGERVKRLKG-HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQ 189
Query: 146 QYLGATHTQLRFQAVFNDTEEFVLS--IDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWI 203
+ T+ L FNDT + ++S ID N+I +WD L K+ H + +
Sbjct: 190 TFQN-TYQVLA--VTFNDTSDQIISGGID---NDIKVWD-LRQNKLTYTMRGHADSVTGL 242
Query: 204 EHSPAEAAFITCGTDRSVRFW 224
S + ++ D +VR W
Sbjct: 243 SLSSEGSYLLSNAMDNTVRVW 263
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 163 (62.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 55/201 (27%), Positives = 93/201 (46%)
Query: 27 FHPSGDFLL-AGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTASK 85
FHP+G L AG D I L++V C A + S GA+ ++ Y++ G M +AS
Sbjct: 75 FHPNGSTLASAGFDRLIL-LWNVYG-DCDNYATLKGHS--GAVMELHYNTDGSMLFSAST 130
Query: 86 DGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVK 145
D + +WD + V+ + G H + + + + V + D TVKLW++ ++
Sbjct: 131 DKTVAVWDSETGERVKRLKG-HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQ 189
Query: 146 QYLGATHTQLRFQAVFNDTEEFVLS--IDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWI 203
+ T+ L FNDT + ++S ID N+I +WD L K+ H + +
Sbjct: 190 TFQN-TYQVLA--VTFNDTSDQIISGGID---NDIKVWD-LRQNKLTYTMRGHADSVTGL 242
Query: 204 EHSPAEAAFITCGTDRSVRFW 224
S + ++ D +VR W
Sbjct: 243 SLSSEGSYLLSNAMDNTVRVW 263
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 166 (63.5 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 40/159 (25%), Positives = 79/159 (49%)
Query: 66 GAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVL 125
G + V +S G V+ S D +++WD + ++++ G GT E+ + F+ D + +
Sbjct: 751 GPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLA--FSPDGKLLA 808
Query: 126 SCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALT 185
S D+T+ LW+ ++G L++ + G H+ + A D +E + D+ + I IWD T
Sbjct: 809 SGSYDNTIDLWDSATGELLQTFEGHPHS-IWSVAFAPDGKELASASDDST--IKIWDLAT 865
Query: 186 AEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
E + + +H + R + SP + D +++ W
Sbjct: 866 GE-LQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVW 903
Score = 166 (63.5 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 47/206 (22%), Positives = 101/206 (49%)
Query: 20 HNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGM 79
H++ SV+F P G L + +D ++D+ T + + + S + ++ V +S G +
Sbjct: 835 HSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLD----SHSQSVRSVAFSPDGKL 890
Query: 80 YVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVS 139
++S D I++W+ + +S+ G G ++ + F+ D + + S + +TVKLW +
Sbjct: 891 LASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVA--FSPDGKKLASGSEKNTVKLWNPA 948
Query: 140 SGRLVKQYLGATHTQ-LRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIG 198
+G L++ G H+Q +R A D ++ S + + I +W++ T E + + +
Sbjct: 949 TGELLQTLEG--HSQSVRSVAFSPDGKQLASSSSDTT--IKLWNSTTGELQQTFKGHDLW 1004
Query: 199 APRWIEHSPAEAAFITCGTDRSVRFW 224
R + SP ++ D +++ W
Sbjct: 1005 I-RAVAFSPDGKHLVSGSDDNTIKLW 1029
Score = 166 (63.5 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 49/209 (23%), Positives = 96/209 (45%)
Query: 18 DTHN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSS 75
D+H+ VRSV+F P G L + + +++ T + S +G + V +S
Sbjct: 873 DSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLE----GRSGWVKSVAFSP 928
Query: 76 TGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKL 135
G + S+ ++LW+ + ++++ G H + S F+ D + + S D+T+KL
Sbjct: 929 DGKKLASGSEKNTVKLWNPATGELLQTLEG-HSQS-VRSVAFSPDGKQLASSSSDTTIKL 986
Query: 136 WEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSN 195
W ++G L + + G +R A D + V D+ N I +WD T+E + + +
Sbjct: 987 WNSTTGELQQTFKGHD-LWIRAVAFSPDGKHLVSGSDD--NTIKLWDLATSE-LQQSLED 1042
Query: 196 HIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
H + + SP + + D +++ W
Sbjct: 1043 HSRSVHAVAFSPDDKQLASSSLDSTIKLW 1071
Score = 151 (58.2 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 49/204 (24%), Positives = 95/204 (46%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
V SV F P G L++G+ ++D T + + + +G + + +S G +
Sbjct: 753 VESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLD----GHSGTVESLAFSPDGKLLA 808
Query: 82 TASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSG 141
+ S D I LWD + +++ G H + S F D + + S DST+K+W++++G
Sbjct: 809 SGSYDNTIDLWDSATGELLQTFEG-HPHS-IWSVAFAPDGKELASASDDSTIKIWDLATG 866
Query: 142 RLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPR 201
L +Q L + H+Q F+ + + S S I +W+ T E + + G +
Sbjct: 867 EL-QQTLDS-HSQSVRSVAFSPDGKLLASSSLDST-IKVWNPATGE-LQQSLEGRSGWVK 922
Query: 202 WIEHSPAEAAFITCGTDRS-VRFW 224
+ SP + + G++++ V+ W
Sbjct: 923 SVAFSP-DGKKLASGSEKNTVKLW 945
Score = 144 (55.7 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 49/209 (23%), Positives = 91/209 (43%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
+ +VRSV+F P G L + + L++ T + + ++ + V +S G
Sbjct: 960 SQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRA----VAFSPDGK 1015
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
V+ S D I+LWD ++ +S+ + A + F+ D + + S DST+KLW+
Sbjct: 1016 HLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVA--FSPDDKQLASSSLDSTIKLWDS 1073
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIG 198
++G L + G H+Q F+ + + S + I +W+ LT E G
Sbjct: 1074 ATGELQRTLEG--HSQGVRSVTFSPDGKLLAS-NSYDGTIKLWNPLTGEL----QQTLTG 1126
Query: 199 APRWIEH---SPAEAAFITCGTDRSVRFW 224
W++ SP + D +++ W
Sbjct: 1127 RSDWVDSVAFSPDGKQLASGYYDSTIKLW 1155
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 42/169 (24%), Positives = 76/169 (44%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
+ VRSV+F P G L + + L++ T + L + S ++ V +S G
Sbjct: 1086 SQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGE--LQQTLTGRS--DWVDSVAFSPDGK 1141
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
+ D I+LWD + ++++ G H S F+ D + + S D T KLW+
Sbjct: 1142 QLASGYYDSTIKLWDSATGELLQTLEG-HSD-RIQSVVFSPDGKLLASGSYDQTAKLWDP 1199
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE 187
++G L++ + G H++ F+ + + S I +WD +T E
Sbjct: 1200 ATGELLQIFEG--HSKWVESVAFSPDGKLLAS-SSYGETIKLWDPVTGE 1245
>DICTYBASE|DDB_G0278353 [details] [associations]
symbol:smu1 "suppressor of mec-8 and unc-52-like
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
dictyBase:DDB_G0278353 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P26449
PROSITE:PS50897 KO:K13111 OMA:NGHWDTV RefSeq:XP_642306.2
ProteinModelPortal:Q54Y96 EnsemblProtists:DDB0233537 GeneID:8621512
KEGG:ddi:DDB_G0278353 ProtClustDB:CLSZ2430773 Uniprot:Q54Y96
Length = 530
Score = 164 (62.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 47/168 (27%), Positives = 79/168 (47%)
Query: 24 SVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLS----ANVPEISVNGAINQVRYSSTGGM 79
++ F P +LL G+ ++D NT + S +N + + AI + +S G
Sbjct: 230 TIKFSPDSKYLLTGSMDGFIEVWDYNTGKLSKSLAYQSNDDFMMHDDAILCIAFSKDGEF 289
Query: 80 YVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVS 139
T S D I++W S C+R AH T T F+++ +LS DS++K+ +
Sbjct: 290 LATGSLDNKIKVWQIKSGKCLRKFEPAH-TNGVTCLQFSRNSTQILSGSFDSSLKIHGLK 348
Query: 140 SGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE 187
SG+ +K + G H FN E+ V+S +I IWDA +++
Sbjct: 349 SGKALKIFRG--HQSFVNDCCFNHDEDRVISCSS-DGKIKIWDAKSSD 393
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 163 (62.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 51/207 (24%), Positives = 90/207 (43%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T VRSV F G L+ +D ++ + Q +L + I+ + ++S G
Sbjct: 103 TATVRSVHFCSDGQSLVTASDDKTVKVWSTHR-QRFLFSLTQHINW---VRCAKFSPDGR 158
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
+ V+AS D ++LWD S C+ S HG T +F + + G D+TVK+W+
Sbjct: 159 LIVSASDDKTVKLWDKTSRECIHSYC-EHG-GFVTYVDFHPSGTCIAAAGMDNTVKVWDA 216
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIG 198
+ RL++ Y H+ F+ + ++++ S + I D + ++ H G
Sbjct: 217 RTHRLLQHY--QLHSAAVNALSFHPSGNYLITASSDST-LKILDLMEG-RLLYTLHGHQG 272
Query: 199 APRWIEHSPAEAAFITCGTDRSVRFWK 225
+ S F + G+D V WK
Sbjct: 273 PATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 140 (54.3 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 52/214 (24%), Positives = 87/214 (40%)
Query: 11 RAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQ 70
RA+R V V+F PSG L +G+ ++ N + + +
Sbjct: 53 RAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNV----KGESTVFRAHTATVRS 108
Query: 71 VRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKD 130
V + S G VTAS D +++W + S+ H A F+ D R ++S D
Sbjct: 109 VHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLT-QH-INWVRCAKFSPDGRLIVSASDD 166
Query: 131 STVKLWEVSSGRLVKQYL--GATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEK 188
TVKLW+ +S + Y G T + F + T +D N + +WDA T +
Sbjct: 167 KTVKLWDKTSRECIHSYCEHGGFVTYVDFHP--SGTCIAAAGMD---NTVKVWDART-HR 220
Query: 189 VAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVR 222
+ + H A + P+ IT +D +++
Sbjct: 221 LLQHYQLHSAAVNALSFHPSGNYLITASSDSTLK 254
Score = 135 (52.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 36/159 (22%), Positives = 69/159 (43%)
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLW-DGVSANCVRSIVGAHGTAEATSANFTKDQRFVL 125
A+ V +S +G + + S+D +R+W V ++ AH TA S +F D + ++
Sbjct: 63 AVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGES--TVFRAH-TATVRSVHFCSDGQSLV 119
Query: 126 SCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALT 185
+ D TVK+W R + + H A F+ ++S + + +WD +
Sbjct: 120 TASDDKTVKVWSTHRQRFL--FSLTQHINWVRCAKFSPDGRLIVSASDDKT-VKLWDKTS 176
Query: 186 AEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
E + + H G +++ P+ G D +V+ W
Sbjct: 177 RECIHSYCE-HGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Score = 123 (48.4 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 36/169 (21%), Positives = 71/169 (42%)
Query: 13 FRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVR 72
F + Q + VR F P G +++ +D L+D + +C S G + V
Sbjct: 139 FSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSY----CEHGGFVTYVD 194
Query: 73 YSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDST 132
+ +G A D +++WD + ++ H A + +F ++++ DST
Sbjct: 195 FHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQ-LHSAA-VNALSFHPSGNYLITASSDST 252
Query: 133 VKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
+K+ ++ GRL+ G H F+ T E+ S ++++W
Sbjct: 253 LKILDLMEGRLLYTLHG--HQGPATTVAFSRTGEYFAS-GGSDEQVMVW 298
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 163 (62.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 55/201 (27%), Positives = 93/201 (46%)
Query: 27 FHPSGDFLL-AGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTASK 85
FHP+G L AG D I L++V C A + S GA+ ++ Y++ G M +AS
Sbjct: 74 FHPNGSTLASAGFDRLIL-LWNVYG-DCDNYATLKGHS--GAVMELHYNTDGSMLFSAST 129
Query: 86 DGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVK 145
D + +WD + V+ + G H + + + + V + D TVKLW++ ++
Sbjct: 130 DKTVAVWDSETGERVKRLKG-HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQ 188
Query: 146 QYLGATHTQLRFQAVFNDTEEFVLS--IDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWI 203
+ T+ L FNDT + ++S ID N+I +WD L K+ H + +
Sbjct: 189 TFQN-TYQVLA--VTFNDTSDQIISGGID---NDIKVWD-LRQNKLTYTMRGHADSVTGL 241
Query: 204 EHSPAEAAFITCGTDRSVRFW 224
S + ++ D +VR W
Sbjct: 242 SLSSEGSYLLSNAMDNTVRVW 262
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 163 (62.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 53/208 (25%), Positives = 94/208 (45%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDV-NTFQCY-LSANVPEISVNGAINQVRYSST 76
T + +SF+P + G+ A L+D+ N + Y L + EI + ++++
Sbjct: 177 TAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEII------SLSFNTS 230
Query: 77 GGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLW 136
G +T S D + +WD + V ++G H AE +SA+F D +L+ D T KLW
Sbjct: 231 GDRIITGSFDHTVVVWDADTGRKVNILIG-H-CAEISSASFNWDCSLILTGSMDKTCKLW 288
Query: 137 EVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNH 196
+ ++G+ V G H + F+ T + + + I+ A T + +AK H
Sbjct: 289 DATNGKCVATLTG--HDDEILDSCFDYTGKLIATASADGTAR-IFSAATRKCIAKLEG-H 344
Query: 197 IGAPRWIEHSPAEAAFITCGTDRSVRFW 224
G I +P +T +D++ R W
Sbjct: 345 EGEISKISFNPQGNHLLTGSSDKTARIW 372
Score = 132 (51.5 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 38/174 (21%), Positives = 71/174 (40%)
Query: 8 TAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGA 67
T ++ +I + S SF+ +L G+ L+D +C + + + +
Sbjct: 250 TGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDS 309
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
+ TG + TAS DG R++ + C+ + G G E + +F +L+
Sbjct: 310 C----FDYTGKLIATASADGTARIFSAATRKCIAKLEGHEG--EISKISFNPQGNHLLTG 363
Query: 128 GKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
D T ++W+ +G+ ++ G HT F FN V++ N IW
Sbjct: 364 SSDKTARIWDAQTGQCLQVLEG--HTDEIFSCAFNYKGNIVIT-GSKDNTCRIW 414
Score = 116 (45.9 bits), Expect = 0.00020, P = 0.00020
Identities = 50/174 (28%), Positives = 79/174 (45%)
Query: 22 VRSVSFH-PSGDFLLAGTDHPIAHLYDVNTFQCY--LSANVPEISVNGAINQVRYSSTGG 78
V +++F+ P GD + G+ L+ V T +CY + EI V + N ST
Sbjct: 137 VYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEI-VCLSFNP---QST-- 190
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
+ T S D +LWD + V ++ G H +AE S +F +++ D TV +W+
Sbjct: 191 LVATGSMDTTAKLWDIQNGEEVYTLRG-H-SAEIISLSFNTSGDRIITGSFDHTVVVWDA 248
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVL--SIDEPSNEIVIWDALTAEKVA 190
+GR V +G H A FN +L S+D+ +WDA + VA
Sbjct: 249 DTGRKVNILIG--HCAEISSASFNWDCSLILTGSMDKTCK---LWDATNGKCVA 297
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 162 (62.1 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 55/201 (27%), Positives = 92/201 (45%)
Query: 27 FHPSGDFLL-AGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTASK 85
FHP+G L AG D I L+ V C A + S GA+ ++ Y++ G M +AS
Sbjct: 75 FHPNGSTLASAGFDRLIL-LWSVYG-DCDNYATLKGHS--GAVMELHYNTDGSMLFSAST 130
Query: 86 DGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVK 145
D + +WD + V+ + G H + + + + V + D TVKLW++ ++
Sbjct: 131 DKTVAVWDSETGERVKRLKG-HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQ 189
Query: 146 QYLGATHTQLRFQAVFNDTEEFVLS--IDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWI 203
+ T+ L FNDT + ++S ID N+I +WD L K+ H + +
Sbjct: 190 TFQN-TYQVLA--VTFNDTSDQIISGGID---NDIKVWD-LRQNKLTYTMRGHADSVTGL 242
Query: 204 EHSPAEAAFITCGTDRSVRFW 224
S + ++ D +VR W
Sbjct: 243 SLSSEGSYLLSNAMDNTVRVW 263
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 162 (62.1 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 56/201 (27%), Positives = 93/201 (46%)
Query: 27 FHPSGDFLL-AGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTASK 85
FHP G+ L AG D I L++V C A + S GA+ ++ Y++ G M +AS
Sbjct: 101 FHPWGNTLASAGFDRLIL-LWNVYG-DCDNYATLKGHS--GAVMELHYNTDGSMLFSAST 156
Query: 86 DGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVK 145
D + +WD + V+ + G H + + + + V + D TVKLW++ V+
Sbjct: 157 DKTVAVWDSETGERVKRLKG-HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQ 215
Query: 146 QYLGATHTQLRFQAVFNDTEEFVLS--IDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWI 203
+ T+ L FNDT + ++S ID N+I +WD L K+ H + +
Sbjct: 216 TFQN-TYQVLA--VTFNDTSDQIISGGID---NDIKVWD-LRQNKLTYTMRGHADSVTGL 268
Query: 204 EHSPAEAAFITCGTDRSVRFW 224
S + ++ D +VR W
Sbjct: 269 SLSSEGSYLLSNAMDNTVRIW 289
>SGD|S000000653 [details] [associations]
symbol:PWP2 "Conserved 90S pre-ribosomal component"
species:4932 "Saccharomyces cerevisiae" [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0030010 "establishment of cell polarity"
evidence=IMP] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030515
"snoRNA binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000653 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:X59720 EMBL:BK006937 GO:GO:0000910
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030010 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363 KO:K14558
OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 OrthoDB:EOG4350F7 EMBL:X78964 PIR:S44226
RefSeq:NP_009984.1 ProteinModelPortal:P25635 SMR:P25635
DIP:DIP-1868N IntAct:P25635 MINT:MINT-392472 STRING:P25635
PaxDb:P25635 PeptideAtlas:P25635 EnsemblFungi:YCR057C GeneID:850422
KEGG:sce:YCR057C CYGD:YCR057c NextBio:965992 Genevestigator:P25635
GermOnline:YCR057C GO:GO:0034388 Uniprot:P25635
Length = 923
Score = 165 (63.1 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 51/205 (24%), Positives = 92/205 (44%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHL--YDVNTFQCYLSANVPEISVNGAINQVRYSSTGGM 79
V +VS + +G++L G+ + L Y+ + + Y+ + N + YS G
Sbjct: 305 VNTVSVNQTGEWLAFGSSK-LGQLLVYEWQS-ESYILKQQGHFD---STNSLAYSPDGSR 359
Query: 80 YVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVS 139
VTAS+DG I++WD S C+ + H T+ T+ F K + + S D TV+ W++
Sbjct: 360 VVTASEDGKIKVWDITSGFCLATFE-EH-TSSVTAVQFAKRGQVMFSSSLDGTVRAWDLI 417
Query: 140 SGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGA 199
R + + G Q AV + + E V + + +I +W T + + S H G
Sbjct: 418 RYRNFRTFTGTERIQFNCLAV-DPSGEVVCAGSLDNFDIHVWSVQTGQLLDALSG-HEGP 475
Query: 200 PRWIEHSPAEAAFITCGTDRSVRFW 224
+ S + + D+++R W
Sbjct: 476 VSCLSFSQENSVLASASWDKTIRIW 500
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 162 (62.1 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 54/193 (27%), Positives = 89/193 (46%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
+ V FHP + + ++ ++D T Q L + A+N + + G V
Sbjct: 109 ITRVIFHPLWTIMASCSEDATIKVWDYETGQ--LERTLK--GHTDAVNDIAIDAAGKQLV 164
Query: 82 TASKDGAIRLWD-GVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSS 140
+ S D +I+LWD G + +C++S+ G T +S F FVLS +D T+K W++S+
Sbjct: 165 SCSSDLSIKLWDFGQTYDCLKSLKGHEHTV--SSVTFLPTGDFVLSASRDHTIKQWDIST 222
Query: 141 GRLVKQYLGATHTQ-LRFQAVFNDTEEFV-LSIDEPSNEIVIWDALTAEKVAKWS-SNHI 197
G V + G H +R + ND F S+D+ + +W T K AK +H
Sbjct: 223 GYCVYTFRG--HNDWVRMIRISNDGTLFASASLDQT---VTVWSFAT--KSAKLVLRDHE 275
Query: 198 GAPRWIEHSPAEA 210
A +E +P A
Sbjct: 276 HAVECVEWAPDTA 288
Score = 141 (54.7 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 52/220 (23%), Positives = 96/220 (43%)
Query: 20 HNVRSVSFHPSGDFLL-AGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
H V SV+F P+GDF+L A DH I +D++T C + N + +R S+ G
Sbjct: 192 HTVSSVTFLPTGDFVLSASRDHTIKQ-WDISTGYCVYTFR----GHNDWVRMIRISNDGT 246
Query: 79 MYVTASKDGAIRLWDGV--SANCV-----RSIVGAHGTAEATSANFTKDQ------RFVL 125
++ +AS D + +W SA V ++ + N T Q +
Sbjct: 247 LFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILF 306
Query: 126 SCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALT 185
S +D ++K W +++G ++ L A +R A F+ ++++S+ + + +W+ L+
Sbjct: 307 SGSRDRSIKAWNINTGDVLFTLL-AHENWVRGLA-FHPKGKYLISVADDKT-LRVWE-LS 362
Query: 186 AEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
A++ K H + IT D S + W+
Sbjct: 363 AQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWE 402
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 152 (58.6 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 40/156 (25%), Positives = 79/156 (50%)
Query: 2 FDFSKATAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPE 61
+DF K + R + T+ V S+ F+P G L++G+ ++++ C +P
Sbjct: 123 WDFEKRCSVRCLK--GHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRM--LPA 178
Query: 62 ISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
S I V S+ G + TAS DG R+WD +S C++++V ++ FT+++
Sbjct: 179 HSE--PIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVP-LSNLQFTENR 235
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRF 157
+++L +S ++LW+ R+V+ + +H R+
Sbjct: 236 KYLLVSNLNSQIRLWDYRRNRVVRIF--DSHVNTRY 269
Score = 45 (20.9 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 164 TEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRF 223
+E+ + I +PS +I+I D++ + S ++ + P IT GTD VR
Sbjct: 312 SEDGTIQITDPSTKIIIDDSIRHSDDPETSLLNVTSL-----GPF---IITSGTDPYVRV 363
Query: 224 W 224
W
Sbjct: 364 W 364
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 164 (62.8 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 58/223 (26%), Positives = 98/223 (43%)
Query: 8 TAKRAFRVIQD--TH----NVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPE 61
T KRA++ +Q+ H N + S + G DH + +L+ + LS
Sbjct: 2 TTKRAYK-LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKV-NLWAIGKPNAILSL---- 55
Query: 62 ISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
+ I+ V + ++ + + G I+LWD A VR++ G H + S +F
Sbjct: 56 YGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTG-H-RSNCISVDFHPFG 113
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
F S D+ +K+W++ + Y G HT+ F +V+S E N + +W
Sbjct: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKG--HTRGVNVLRFTPDGRWVVSGGE-DNIVKVW 170
Query: 182 DALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
D LTA K+ +H G + ++ P E T DR+V+FW
Sbjct: 171 D-LTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFW 212
Score = 158 (60.7 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 49/208 (23%), Positives = 95/208 (45%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
+ SV+F S + AG L+D+ + + + I+ V + G +
Sbjct: 62 IDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHR---SNCIS-VDFHPFGEFFA 117
Query: 82 TASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSG 141
+ S D +++WD C+ + G H T FT D R+V+S G+D+ VK+W++++G
Sbjct: 118 SGSLDTNLKIWDIRKKGCIHTYKG-H-TRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAG 175
Query: 142 RLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPR 201
+L+ ++ +H + + Q++ EF+L+ + WD T E + G R
Sbjct: 176 KLLTEF--KSH-EGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGV-R 231
Query: 202 WIEHSPAEAAFITCGTDRSVRF--WKEI 227
+ +P + + CG S++ W+ I
Sbjct: 232 CLSFNP-DGKTVLCGLQESLKIFSWEPI 258
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 163 (62.4 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 50/208 (24%), Positives = 91/208 (43%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
+RSV F P G++L G + ++D++T + + E+ I + YSS G V
Sbjct: 330 IRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELD----IYSLDYSSDGRFIV 385
Query: 82 TASKDGAIRLWDGVSANCVRSIVGAH-GTAEA-TSANFTKDQRFVLSCGKDSTVKLWEVS 139
+ S D ++WD C ++ G TS + D R V + D+ V+LW+
Sbjct: 386 SGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQ 445
Query: 140 SGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGA 199
+G +++Y G H + F+ + + S + +WD + ++ + G
Sbjct: 446 TGYFLERYEG--HLDSVYSVAFSPDGKSLAS-GSLDKSLKLWDLSGSRSRSRCRATFNGH 502
Query: 200 PRWI---EHSPAEAAFITCGTDRSVRFW 224
++ SP + I+ DRSV+FW
Sbjct: 503 KDFVLSVAFSPDGSWLISGSKDRSVQFW 530
Score = 141 (54.7 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 37/151 (24%), Positives = 69/151 (45%)
Query: 21 NVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMY 80
++ S+ + G F+++G+ A ++D+ +C + E+ + V S G +
Sbjct: 371 DIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLV 430
Query: 81 VTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSS 140
S D +RLWD + + G H S F+ D + + S D ++KLW++S
Sbjct: 431 AAGSLDNIVRLWDAQTGYFLERYEG-H-LDSVYSVAFSPDGKSLASGSLDKSLKLWDLSG 488
Query: 141 GRLVKQYLGATHTQLRFQAVFNDTEEFVLSI 171
R ++ R +A FN ++FVLS+
Sbjct: 489 SR----------SRSRCRATFNGHKDFVLSV 509
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 160 (61.4 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 56/210 (26%), Positives = 92/210 (43%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVR---YSS 75
T VRSV F G + +D ++ + Q +L S++ IN VR +S
Sbjct: 65 TATVRSVHFCSDGQSFVTASDDKTVKVWATHR-QKFL------FSLSQHINWVRCAKFSP 117
Query: 76 TGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKL 135
G + V+AS D ++LWD S CV S HG T +F + + G D+TVK+
Sbjct: 118 DGRLIVSASDDKTVKLWDKSSRECVHSYC-EHG-GFVTYVDFHPSGTCIAAAGMDNTVKV 175
Query: 136 WEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSN 195
W+V + RL++ Y H+ F+ + ++++ S + I D + ++
Sbjct: 176 WDVRTHRLLQHY--QLHSAAVNGLSFHPSGNYLITASSDST-LKILDLMEG-RLLYTLHG 231
Query: 196 HIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
H G + S F + G+D V WK
Sbjct: 232 HQGPATTVAFSRTGEYFASGGSDEQVMVWK 261
Score = 143 (55.4 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 53/214 (24%), Positives = 87/214 (40%)
Query: 11 RAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQ 70
RA+R V V+F PSG L +G+ ++ N + + +
Sbjct: 15 RAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNV----KGESTVFRAHTATVRS 70
Query: 71 VRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKD 130
V + S G +VTAS D +++W + S+ H A F+ D R ++S D
Sbjct: 71 VHFCSDGQSFVTASDDKTVKVWATHRQKFLFSL-SQH-INWVRCAKFSPDGRLIVSASDD 128
Query: 131 STVKLWEVSSGRLVKQYL--GATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEK 188
TVKLW+ SS V Y G T + F + T +D N + +WD T +
Sbjct: 129 KTVKLWDKSSRECVHSYCEHGGFVTYVDFHP--SGTCIAAAGMD---NTVKVWDVRT-HR 182
Query: 189 VAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVR 222
+ + H A + P+ IT +D +++
Sbjct: 183 LLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLK 216
Score = 130 (50.8 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 36/159 (22%), Positives = 69/159 (43%)
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLW-DGVSANCVRSIVGAHGTAEATSANFTKDQRFVL 125
A+ V +S +G + + S+D +R+W V ++ AH TA S +F D + +
Sbjct: 25 AVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGES--TVFRAH-TATVRSVHFCSDGQSFV 81
Query: 126 SCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALT 185
+ D TVK+W + + + + H A F+ ++S + + +WD +
Sbjct: 82 TASDDKTVKVWATHRQKFL--FSLSQHINWVRCAKFSPDGRLIVSASDDKT-VKLWDKSS 138
Query: 186 AEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
E V + H G +++ P+ G D +V+ W
Sbjct: 139 RECVHSYCE-HGGFVTYVDFHPSGTCIAAAGMDNTVKVW 176
Score = 124 (48.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 38/172 (22%), Positives = 72/172 (41%)
Query: 10 KRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAIN 69
K F + Q + VR F P G +++ +D L+D ++ +C S G +
Sbjct: 98 KFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSY----CEHGGFVT 153
Query: 70 QVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGK 129
V + +G A D +++WD V + + H A +F ++++
Sbjct: 154 YVDFHPSGTCIAAAGMDNTVKVWD-VRTHRLLQHYQLHSAA-VNGLSFHPSGNYLITASS 211
Query: 130 DSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
DST+K+ ++ GRL+ G H F+ T E+ S ++++W
Sbjct: 212 DSTLKILDLMEGRLLYTLHG--HQGPATTVAFSRTGEYFAS-GGSDEQVMVW 260
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 160 (61.4 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 56/210 (26%), Positives = 92/210 (43%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVR---YSS 75
T VRSV F G + +D ++ + Q +L S++ IN VR +S
Sbjct: 103 TATVRSVHFCSDGQSFVTASDDKTVKVWATHR-QKFL------FSLSQHINWVRCAKFSP 155
Query: 76 TGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKL 135
G + V+AS D ++LWD S CV S HG T +F + + G D+TVK+
Sbjct: 156 DGRLIVSASDDKTVKLWDKSSRECVHSYC-EHG-GFVTYVDFHPSGTCIAAAGMDNTVKV 213
Query: 136 WEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSN 195
W+V + RL++ Y H+ F+ + ++++ S + I D + ++
Sbjct: 214 WDVRTHRLLQHY--QLHSAAVNGLSFHPSGNYLITASSDST-LKILDLMEG-RLLYTLHG 269
Query: 196 HIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
H G + S F + G+D V WK
Sbjct: 270 HQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 143 (55.4 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 53/214 (24%), Positives = 87/214 (40%)
Query: 11 RAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQ 70
RA+R V V+F PSG L +G+ ++ N + + +
Sbjct: 53 RAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNV----KGESTVFRAHTATVRS 108
Query: 71 VRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKD 130
V + S G +VTAS D +++W + S+ H A F+ D R ++S D
Sbjct: 109 VHFCSDGQSFVTASDDKTVKVWATHRQKFLFSL-SQH-INWVRCAKFSPDGRLIVSASDD 166
Query: 131 STVKLWEVSSGRLVKQYL--GATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEK 188
TVKLW+ SS V Y G T + F + T +D N + +WD T +
Sbjct: 167 KTVKLWDKSSRECVHSYCEHGGFVTYVDFHP--SGTCIAAAGMD---NTVKVWDVRT-HR 220
Query: 189 VAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVR 222
+ + H A + P+ IT +D +++
Sbjct: 221 LLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLK 254
Score = 130 (50.8 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 36/159 (22%), Positives = 69/159 (43%)
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLW-DGVSANCVRSIVGAHGTAEATSANFTKDQRFVL 125
A+ V +S +G + + S+D +R+W V ++ AH TA S +F D + +
Sbjct: 63 AVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGES--TVFRAH-TATVRSVHFCSDGQSFV 119
Query: 126 SCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALT 185
+ D TVK+W + + + + H A F+ ++S + + +WD +
Sbjct: 120 TASDDKTVKVWATHRQKFL--FSLSQHINWVRCAKFSPDGRLIVSASDDKT-VKLWDKSS 176
Query: 186 AEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
E V + H G +++ P+ G D +V+ W
Sbjct: 177 RECVHSYCE-HGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Score = 124 (48.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 38/172 (22%), Positives = 72/172 (41%)
Query: 10 KRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAIN 69
K F + Q + VR F P G +++ +D L+D ++ +C S G +
Sbjct: 136 KFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSY----CEHGGFVT 191
Query: 70 QVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGK 129
V + +G A D +++WD V + + H A +F ++++
Sbjct: 192 YVDFHPSGTCIAAAGMDNTVKVWD-VRTHRLLQHYQLHSAA-VNGLSFHPSGNYLITASS 249
Query: 130 DSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
DST+K+ ++ GRL+ G H F+ T E+ S ++++W
Sbjct: 250 DSTLKILDLMEGRLLYTLHG--HQGPATTVAFSRTGEYFAS-GGSDEQVMVW 298
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 160 (61.4 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 41/157 (26%), Positives = 77/157 (49%)
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
+ V++S G + +AS+D +RLW S AH TA S +F+ D +F+ +
Sbjct: 21 VTSVQFSPHGNLLASASRDRTVRLWIPDKRGKF-SEFKAH-TAPVRSVDFSADGQFLATA 78
Query: 128 GKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE 187
+D ++K+W + R + TH +R A F+ ++S E I IWD +
Sbjct: 79 SEDKSIKVWSMYRQRFLYSLYRHTHW-VRC-AKFSPDGRLIVSCSEDKT-IKIWDTTNKQ 135
Query: 188 KVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
V +S + +G +++ +P+ + G+D++V+ W
Sbjct: 136 CVNNFSDS-VGFANFVDFNPSGTCIASAGSDQTVKVW 171
Score = 152 (58.6 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 50/213 (23%), Positives = 91/213 (42%)
Query: 11 RAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGA-IN 69
RA+R + V SV F P G+ L + + L+ + E + A +
Sbjct: 10 RAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDK-----RGKFSEFKAHTAPVR 64
Query: 70 QVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGK 129
V +S+ G TAS+D +I++W + S+ H T A F+ D R ++SC +
Sbjct: 65 SVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLY-RH-THWVRCAKFSPDGRLIVSCSE 122
Query: 130 DSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKV 189
D T+K+W+ ++ + V + + F FN + + S + +WD + K+
Sbjct: 123 DKTIKIWDTTNKQCVNNFSDSVGFA-NF-VDFNPSGTCIASAGSDQT-VKVWD-VRVNKL 178
Query: 190 AKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVR 222
+ H G I P+ IT +D +++
Sbjct: 179 LQHYQVHSGGVNCISFHPSGNYLITASSDGTLK 211
Score = 138 (53.6 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 47/207 (22%), Positives = 84/207 (40%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T VRSV F G FL ++ ++ + Q +L + + ++S G
Sbjct: 60 TAPVRSVDFSADGQFLATASEDKSIKVWSMYR-QRFLYSLYRHTHW---VRCAKFSPDGR 115
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
+ V+ S+D I++WD + CV + + G A +F + S G D TVK+W+V
Sbjct: 116 LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFV--DFNPSGTCIASAGSDQTVKVWDV 173
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIG 198
+L++ Y H+ F+ + ++++ + I D L + H G
Sbjct: 174 RVNKLLQHY--QVHSGGVNCISFHPSGNYLITASSDGT-LKILDLLEGRLIYTLQG-HTG 229
Query: 199 APRWIEHSPAEAAFITCGTDRSVRFWK 225
+ S F + G D V W+
Sbjct: 230 PVFTVSFSKGGELFASGGADTQVLLWR 256
Score = 126 (49.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 39/169 (23%), Positives = 74/169 (43%)
Query: 13 FRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVR 72
+ + + TH VR F P G +++ ++ ++D QC N + SV G N V
Sbjct: 96 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCV--NNFSD-SV-GFANFVD 151
Query: 73 YSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDST 132
++ +G +A D +++WD V N + H + +F ++++ D T
Sbjct: 152 FNPSGTCIASAGSDQTVKVWD-VRVNKLLQHYQVH-SGGVNCISFHPSGNYLITASSDGT 209
Query: 133 VKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
+K+ ++ GRL+ G HT F F+ E S ++++W
Sbjct: 210 LKILDLLEGRLIYTLQG--HTGPVFTVSFSKGGELFAS-GGADTQVLLW 255
Score = 112 (44.5 bits), Expect = 0.00065, P = 0.00065
Identities = 32/120 (26%), Positives = 57/120 (47%)
Query: 25 VSFHPSGDFLL-AGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTA 83
V F+PSG + AG+D + ++DV + V +G +N + + +G +TA
Sbjct: 150 VDFNPSGTCIASAGSDQTVK-VWDVRVNKLLQHYQVH----SGGVNCISFHPSGNYLITA 204
Query: 84 SKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRL 143
S DG +++ D + + ++ G H T + +F+K S G D+ V LW + L
Sbjct: 205 SSDGTLKILDLLEGRLIYTLQG-H-TGPVFTVSFSKGGELFASGGADTQVLLWRTNFDEL 262
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 160 (61.4 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 41/157 (26%), Positives = 77/157 (49%)
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
+ V++S G + +AS+D +RLW S AH TA S +F+ D +F+ +
Sbjct: 63 VTSVQFSPHGNLLASASRDRTVRLWIPDKRGKF-SEFKAH-TAPVRSVDFSADGQFLATA 120
Query: 128 GKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE 187
+D ++K+W + R + TH +R A F+ ++S E I IWD +
Sbjct: 121 SEDKSIKVWSMYRQRFLYSLYRHTHW-VRC-AKFSPDGRLIVSCSEDKT-IKIWDTTNKQ 177
Query: 188 KVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
V +S + +G +++ +P+ + G+D++V+ W
Sbjct: 178 CVNNFSDS-VGFANFVDFNPSGTCIASAGSDQTVKVW 213
Score = 155 (59.6 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 49/213 (23%), Positives = 92/213 (43%)
Query: 11 RAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGA-IN 69
RA+R + V SV F P G+ L + + L+ + E + A +
Sbjct: 52 RAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDK-----RGKFSEFKAHTAPVR 106
Query: 70 QVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGK 129
V +S+ G TAS+D +I++W + S+ H T A F+ D R ++SC +
Sbjct: 107 SVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLY-RH-THWVRCAKFSPDGRLIVSCSE 164
Query: 130 DSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKV 189
D T+K+W+ ++ + V + + F FN + + S + +WD + K+
Sbjct: 165 DKTIKIWDTTNKQCVNNFSDSVGFA-NF-VDFNPSGTCIASAGSDQT-VKVWD-VRVNKL 220
Query: 190 AKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVR 222
+ H G I P++ +T +D +++
Sbjct: 221 LQHYQVHSGGVNCISFHPSDNYLVTASSDGTLK 253
Score = 141 (54.7 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 47/207 (22%), Positives = 85/207 (41%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T VRSV F G FL ++ ++ + Q +L + + ++S G
Sbjct: 102 TAPVRSVDFSADGQFLATASEDKSIKVWSMYR-QRFLYSLYRHTHW---VRCAKFSPDGR 157
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
+ V+ S+D I++WD + CV + + G A +F + S G D TVK+W+V
Sbjct: 158 LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFV--DFNPSGTCIASAGSDQTVKVWDV 215
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIG 198
+L++ Y H+ F+ ++ ++++ + I D L + H G
Sbjct: 216 RVNKLLQHY--QVHSGGVNCISFHPSDNYLVTASSDGT-LKILDLLEGRLIYTLQG-HTG 271
Query: 199 APRWIEHSPAEAAFITCGTDRSVRFWK 225
+ S F + G D V W+
Sbjct: 272 PVFTVSFSKGGELFASGGADTQVLLWR 298
Score = 127 (49.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 39/169 (23%), Positives = 74/169 (43%)
Query: 13 FRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVR 72
+ + + TH VR F P G +++ ++ ++D QC N + SV G N V
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCV--NNFSD-SV-GFANFVD 193
Query: 73 YSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDST 132
++ +G +A D +++WD V N + H + +F ++++ D T
Sbjct: 194 FNPSGTCIASAGSDQTVKVWD-VRVNKLLQHYQVH-SGGVNCISFHPSDNYLVTASSDGT 251
Query: 133 VKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
+K+ ++ GRL+ G HT F F+ E S ++++W
Sbjct: 252 LKILDLLEGRLIYTLQG--HTGPVFTVSFSKGGELFAS-GGADTQVLLW 297
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 160 (61.4 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 41/157 (26%), Positives = 77/157 (49%)
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
+ V++S G + +AS+D +RLW S AH TA S +F+ D +F+ +
Sbjct: 63 VTSVQFSPHGNLLASASRDRTVRLWIPDKRGKF-SEFKAH-TAPVRSVDFSADGQFLATA 120
Query: 128 GKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE 187
+D ++K+W + R + TH +R A F+ ++S E I IWD +
Sbjct: 121 SEDKSIKVWSMYRQRFLYSLYRHTHW-VRC-AKFSPDGRLIVSCSEDKT-IKIWDTTNKQ 177
Query: 188 KVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
V +S + +G +++ +P+ + G+D++V+ W
Sbjct: 178 CVNNFSDS-VGFANFVDFNPSGTCIASAGSDQTVKVW 213
Score = 152 (58.6 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 50/213 (23%), Positives = 91/213 (42%)
Query: 11 RAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGA-IN 69
RA+R + V SV F P G+ L + + L+ + E + A +
Sbjct: 52 RAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDK-----RGKFSEFKAHTAPVR 106
Query: 70 QVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGK 129
V +S+ G TAS+D +I++W + S+ H T A F+ D R ++SC +
Sbjct: 107 SVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLY-RH-THWVRCAKFSPDGRLIVSCSE 164
Query: 130 DSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKV 189
D T+K+W+ ++ + V + + F FN + + S + +WD + K+
Sbjct: 165 DKTIKIWDTTNKQCVNNFSDSVGFA-NF-VDFNPSGTCIASAGSDQT-VKVWD-VRVNKL 220
Query: 190 AKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVR 222
+ H G I P+ IT +D +++
Sbjct: 221 LQHYQVHSGGVNCISFHPSGNYLITASSDGTLK 253
Score = 138 (53.6 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 47/207 (22%), Positives = 84/207 (40%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T VRSV F G FL ++ ++ + Q +L + + ++S G
Sbjct: 102 TAPVRSVDFSADGQFLATASEDKSIKVWSMYR-QRFLYSLYRHTHW---VRCAKFSPDGR 157
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
+ V+ S+D I++WD + CV + + G A +F + S G D TVK+W+V
Sbjct: 158 LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFV--DFNPSGTCIASAGSDQTVKVWDV 215
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIG 198
+L++ Y H+ F+ + ++++ + I D L + H G
Sbjct: 216 RVNKLLQHY--QVHSGGVNCISFHPSGNYLITASSDGT-LKILDLLEGRLIYTLQG-HTG 271
Query: 199 APRWIEHSPAEAAFITCGTDRSVRFWK 225
+ S F + G D V W+
Sbjct: 272 PVFTVSFSKGGELFASGGADTQVLLWR 298
Score = 126 (49.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 39/169 (23%), Positives = 74/169 (43%)
Query: 13 FRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVR 72
+ + + TH VR F P G +++ ++ ++D QC N + SV G N V
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCV--NNFSD-SV-GFANFVD 193
Query: 73 YSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDST 132
++ +G +A D +++WD V N + H + +F ++++ D T
Sbjct: 194 FNPSGTCIASAGSDQTVKVWD-VRVNKLLQHYQVH-SGGVNCISFHPSGNYLITASSDGT 251
Query: 133 VKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
+K+ ++ GRL+ G HT F F+ E S ++++W
Sbjct: 252 LKILDLLEGRLIYTLQG--HTGPVFTVSFSKGGELFAS-GGADTQVLLW 297
Score = 112 (44.5 bits), Expect = 0.00074, P = 0.00074
Identities = 32/120 (26%), Positives = 57/120 (47%)
Query: 25 VSFHPSGDFLL-AGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTA 83
V F+PSG + AG+D + ++DV + V +G +N + + +G +TA
Sbjct: 192 VDFNPSGTCIASAGSDQTVK-VWDVRVNKLLQHYQVH----SGGVNCISFHPSGNYLITA 246
Query: 84 SKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRL 143
S DG +++ D + + ++ G H T + +F+K S G D+ V LW + L
Sbjct: 247 SSDGTLKILDLLEGRLIYTLQG-H-TGPVFTVSFSKGGELFASGGADTQVLLWRTNFDEL 304
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 158 (60.7 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 50/208 (24%), Positives = 94/208 (45%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQ--CYLSANVPEISVNGAINQVRYSST 76
T + +SF+P + G+ A L+D+ + + L+ ++ EI + + ++
Sbjct: 177 TAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEII------SLSFDTS 230
Query: 77 GGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLW 136
G +T S D + +WD + V +++G H AE +SA F+ D +L+ D T LW
Sbjct: 231 GDRIITGSFDHTVVVWDASTGRKVHTLIG-H-CAEISSALFSWDCSLILTGSMDKTCMLW 288
Query: 137 EVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNH 196
+ +SG+ V G H + F+ T + + + V ++A T + + K H
Sbjct: 289 DATSGKCVATLTG--HDDEILDSCFDYTGKLIATASADGTARV-YNATTRKCITKLEG-H 344
Query: 197 IGAPRWIEHSPAEAAFITCGTDRSVRFW 224
G I +P +T +D++ R W
Sbjct: 345 EGEISKISFNPQGNRLLTGSSDKTARIW 372
Score = 133 (51.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 38/175 (21%), Positives = 73/175 (41%)
Query: 7 ATAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNG 66
+T ++ +I + S F +L G+ L+D + +C + + +
Sbjct: 249 STGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILD 308
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLS 126
+ + TG + TAS DG R+++ + C+ + G G E + +F +L+
Sbjct: 309 SC----FDYTGKLIATASADGTARVYNATTRKCITKLEGHEG--EISKISFNPQGNRLLT 362
Query: 127 CGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
D T ++W+V +G+ ++ G HT F FN V++ N IW
Sbjct: 363 GSSDKTARIWDVQTGQCLQVLEG--HTDEIFSCAFNYKGNIVIT-GSKDNSCRIW 414
Score = 119 (46.9 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 47/172 (27%), Positives = 76/172 (44%)
Query: 22 VRSVSFH-PSGDFLLAGTDHPIAHLYDVNTFQCY--LSANVPEISVNGAINQVRYSSTGG 78
V +++F+ P GD + G+ L+ T +CY + EI Q +TG
Sbjct: 137 VYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGS 196
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
M TA +LWD S V ++ G H AE S +F +++ D TV +W+
Sbjct: 197 MDTTA------KLWDIQSGEEVVTLTG-H-LAEIISLSFDTSGDRIITGSFDHTVVVWDA 248
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVA 190
S+GR V +G H A+F+ +L+ ++WDA + + VA
Sbjct: 249 STGRKVHTLIG--HCAEISSALFSWDCSLILT-GSMDKTCMLWDATSGKCVA 297
>UNIPROTKB|Q5ZME8 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9031 "Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OMA:NGHWDTV OrthoDB:EOG49ZXP0
EMBL:AJ719436 IPI:IPI00571757 RefSeq:NP_001007980.1
UniGene:Gga.5532 ProteinModelPortal:Q5ZME8 PRIDE:Q5ZME8
Ensembl:ENSGALT00000003135 GeneID:427377 KEGG:gga:427377
InParanoid:Q5ZME8 NextBio:20828644 Uniprot:Q5ZME8
Length = 513
Score = 159 (61.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 42/175 (24%), Positives = 81/175 (46%)
Query: 17 QDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCY--LSANVPE--ISVNGAINQVR 72
Q +H V F P G +L+ G+ +++ T + L + + ++ A+ +
Sbjct: 213 QKSH-VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMC 271
Query: 73 YSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDST 132
+S M T ++DG I++W S C+R AH T +F+KD +LS D T
Sbjct: 272 FSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKG-VTCLSFSKDSSQILSASFDQT 330
Query: 133 VKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE 187
+++ + SG+ +K++ G H+ +A F +++S + +W+ T E
Sbjct: 331 IRIHGLKSGKTLKEFRG--HSSFVNEATFTQDGHYIISASSDGT-VKVWNVKTTE 382
>UNIPROTKB|Q2TBS9 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 EMBL:BC109712 IPI:IPI00726295
RefSeq:NP_001033662.1 UniGene:Bt.25206 ProteinModelPortal:Q2TBS9
SMR:Q2TBS9 STRING:Q2TBS9 PRIDE:Q2TBS9 Ensembl:ENSBTAT00000020865
GeneID:540842 KEGG:bta:540842 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 InParanoid:Q2TBS9 KO:K13111 OMA:NGHWDTV
OrthoDB:EOG49ZXP0 NextBio:20878868 Uniprot:Q2TBS9
Length = 513
Score = 159 (61.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 43/175 (24%), Positives = 81/175 (46%)
Query: 17 QDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCY--LSANVPE--ISVNGAINQVR 72
Q +H V F P G +L+ G+ +++ T + L + + ++ A+ +
Sbjct: 213 QKSH-VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMC 271
Query: 73 YSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDST 132
+S M T ++DG I++W S C+R AH T +F+KD +LS D T
Sbjct: 272 FSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKG-VTCLSFSKDSSQILSASFDQT 330
Query: 133 VKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE 187
+++ + SG+ +K++ G H+ +A F +++S + IW+ T E
Sbjct: 331 IRIHGLKSGKTLKEFRG--HSSFVNEATFTQDGHYIISASSDGT-VKIWNMKTTE 382
>UNIPROTKB|Q2TAY7 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL162590 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AK001667 EMBL:AK022032
EMBL:BC002876 EMBL:BC110654 IPI:IPI00305833 RefSeq:NP_060695.2
UniGene:Hs.655351 ProteinModelPortal:Q2TAY7 SMR:Q2TAY7
IntAct:Q2TAY7 MINT:MINT-256588 STRING:Q2TAY7 PhosphoSite:Q2TAY7
DMDM:109939732 PaxDb:Q2TAY7 PeptideAtlas:Q2TAY7 PRIDE:Q2TAY7
DNASU:55234 Ensembl:ENST00000397149 GeneID:55234 KEGG:hsa:55234
UCSC:uc003zsf.1 GeneCards:GC09M033041 HGNC:HGNC:18247 HPA:HPA019228
HPA:HPA019708 neXtProt:NX_Q2TAY7 PharmGKB:PA134903890
PhylomeDB:Q2TAY7 ChiTaRS:SMU1 GenomeRNAi:55234 NextBio:59249
ArrayExpress:Q2TAY7 Bgee:Q2TAY7 CleanEx:HS_SMU1
Genevestigator:Q2TAY7 GermOnline:ENSG00000122692 Uniprot:Q2TAY7
Length = 513
Score = 159 (61.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 43/175 (24%), Positives = 81/175 (46%)
Query: 17 QDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCY--LSANVPE--ISVNGAINQVR 72
Q +H V F P G +L+ G+ +++ T + L + + ++ A+ +
Sbjct: 213 QKSH-VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMC 271
Query: 73 YSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDST 132
+S M T ++DG I++W S C+R AH T +F+KD +LS D T
Sbjct: 272 FSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKG-VTCLSFSKDSSQILSASFDQT 330
Query: 133 VKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE 187
+++ + SG+ +K++ G H+ +A F +++S + IW+ T E
Sbjct: 331 IRIHGLKSGKTLKEFRG--HSSFVNEATFTQDGHYIISASSDGT-VKIWNMKTTE 382
>MGI|MGI:1915546 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog
(C. elegans)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:1915546 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AB044414 EMBL:AK003493
EMBL:AK011140 EMBL:AK145982 EMBL:AK159635 EMBL:AK168813
EMBL:BC057446 IPI:IPI00331342 IPI:IPI00760034 RefSeq:NP_067510.3
UniGene:Mm.289929 ProteinModelPortal:Q3UKJ7 SMR:Q3UKJ7
STRING:Q3UKJ7 PhosphoSite:Q3UKJ7 PaxDb:Q3UKJ7 PRIDE:Q3UKJ7
Ensembl:ENSMUST00000030117 GeneID:74255 KEGG:mmu:74255
UCSC:uc008shv.2 InParanoid:Q3UKJ7 NextBio:340258 Bgee:Q3UKJ7
Genevestigator:Q3UKJ7 GermOnline:ENSMUSG00000028409 Uniprot:Q3UKJ7
Length = 513
Score = 159 (61.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 43/175 (24%), Positives = 81/175 (46%)
Query: 17 QDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCY--LSANVPE--ISVNGAINQVR 72
Q +H V F P G +L+ G+ +++ T + L + + ++ A+ +
Sbjct: 213 QKSH-VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMC 271
Query: 73 YSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDST 132
+S M T ++DG I++W S C+R AH T +F+KD +LS D T
Sbjct: 272 FSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKG-VTCLSFSKDSSQILSASFDQT 330
Query: 133 VKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE 187
+++ + SG+ +K++ G H+ +A F +++S + IW+ T E
Sbjct: 331 IRIHGLKSGKTLKEFRG--HSSFVNEATFTQDGHYIISASSDGT-VKIWNMKTTE 382
>RGD|620694 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog (C.
elegans)" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620694
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0 EMBL:AY029526
IPI:IPI00197468 RefSeq:NP_476543.1 UniGene:Rn.54978
ProteinModelPortal:Q99M63 STRING:Q99M63 PRIDE:Q99M63 GeneID:117541
KEGG:rno:117541 UCSC:RGD:620694 InParanoid:Q99M63 NextBio:620357
Genevestigator:Q99M63 GermOnline:ENSRNOG00000007671 Uniprot:Q99M63
Length = 513
Score = 159 (61.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 43/175 (24%), Positives = 81/175 (46%)
Query: 17 QDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCY--LSANVPE--ISVNGAINQVR 72
Q +H V F P G +L+ G+ +++ T + L + + ++ A+ +
Sbjct: 213 QKSH-VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMC 271
Query: 73 YSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDST 132
+S M T ++DG I++W S C+R AH T +F+KD +LS D T
Sbjct: 272 FSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKG-VTCLSFSKDSSQILSASFDQT 330
Query: 133 VKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE 187
+++ + SG+ +K++ G H+ +A F +++S + IW+ T E
Sbjct: 331 IRIHGLKSGKTLKEFRG--HSSFVNEATFTQDGHYIISASSDGT-VKIWNMKTTE 382
>UNIPROTKB|Q92636 [details] [associations]
symbol:NSMAF "Protein FAN" species:9606 "Homo sapiens"
[GO:0005057 "receptor signaling protein activity" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0006672 "ceramide
metabolic process" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Pfam:PF02893 GO:GO:0005737 GO:GO:0006672 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0005057
Pathway_Interaction_DB:tnfpathway InterPro:IPR004182 SMART:SM00568
EMBL:CH471068 Gene3D:1.10.1540.10 Gene3D:2.30.29.40
InterPro:IPR000409 InterPro:IPR023362 Pfam:PF02138 SMART:SM01026
SUPFAM:SSF81837 PROSITE:PS50197 EMBL:X96586 EMBL:AK294009
EMBL:AC068522 EMBL:AC092700 EMBL:BC041124 IPI:IPI00328260
RefSeq:NP_001138244.1 RefSeq:NP_003571.2 UniGene:Hs.372000
ProteinModelPortal:Q92636 SMR:Q92636 IntAct:Q92636
MINT:MINT-2813141 STRING:Q92636 PhosphoSite:Q92636 DMDM:209572614
PaxDb:Q92636 PRIDE:Q92636 Ensembl:ENST00000038176
Ensembl:ENST00000427130 GeneID:8439 KEGG:hsa:8439 UCSC:uc003xtt.3
CTD:8439 GeneCards:GC08M059496 H-InvDB:HIX0007527 HGNC:HGNC:8017
HPA:HPA023067 HPA:HPA023148 HPA:HPA023151 MIM:603043
neXtProt:NX_Q92636 PharmGKB:PA31795 HOGENOM:HOG000231605
HOVERGEN:HBG005639 InParanoid:Q92636 OMA:DKNRFQS OrthoDB:EOG4M91QQ
PhylomeDB:Q92636 ChiTaRS:NSMAF GenomeRNAi:8439 NextBio:31574
ArrayExpress:Q92636 Bgee:Q92636 CleanEx:HS_NSMAF
Genevestigator:Q92636 GermOnline:ENSG00000035681 Uniprot:Q92636
Length = 917
Score = 161 (61.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 46/165 (27%), Positives = 84/165 (50%)
Query: 61 EISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKD 120
E+ + +++ + ++ + V+ +K+G + +WD +A + I H +A F+ D
Sbjct: 759 ELEHDVSVDTISLNAASTLLVSGTKEGTVNIWDLTTATLMHQIP-CHSGIVCDTA-FSPD 816
Query: 121 QRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVI 180
R VLS G D + + +V +G L+ + + Q F V++ VLS + S E+++
Sbjct: 817 SRHVLSTGTDGCLNVIDVQTGMLISS-MTSDEPQRCF--VWDGNS--VLSGSQ-SGELLV 870
Query: 181 WDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
WD L A K+++ H GA I + ++ IT G DR + FWK
Sbjct: 871 WDLLGA-KISERIQGHTGAVTCIWMNEQCSSIITGGEDRQIIFWK 914
>UNIPROTKB|F1NQ45 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:KRQKRGK GeneTree:ENSGT00530000063583 EMBL:AC145954
IPI:IPI00602126 Ensembl:ENSGALT00000024299 Uniprot:F1NQ45
Length = 580
Score = 159 (61.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 51/184 (27%), Positives = 89/184 (48%)
Query: 52 QCYLSANVPEISV-NG---AINQVR-YSSTGGMYVTASKDGAIRLWDGVS-ANCVRSIVG 105
+CYL +I V +G ++ VR + +G M ++ S D I+LW+ C+R+ +G
Sbjct: 274 KCYLPKK--QIHVWSGHTKGVSAVRLFPLSGHMLLSCSMDCKIKLWEVYGDRRCLRTFIG 331
Query: 106 AHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTE 165
HG A RF LS D +KLW+ +G+ + ++ T+ ++ + FN E
Sbjct: 332 -HGKAVRDICFNNAGTRF-LSAAYDRYIKLWDTETGQCISRF---TNRKVPYCVKFNPDE 386
Query: 166 E----FVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSV 221
+ FV + + +IV WD + E V ++ H+GA I F++ D+S+
Sbjct: 387 DKQNLFVAGMSD--KKIVQWDIRSGEIVQEYD-RHLGAVNTIVFVDENRRFVSTSDDKSL 443
Query: 222 RFWK 225
R W+
Sbjct: 444 RVWE 447
Score = 114 (45.2 bits), Expect = 0.00057, P = 0.00057
Identities = 43/171 (25%), Positives = 76/171 (44%)
Query: 19 THNVRSVSFHP-SGDFLLAGTDHPIAHLYDV-NTFQCYLSANVPEISVNGAINQVRYSST 76
T V +V P SG LL+ + L++V +C + I A+ + +++
Sbjct: 289 TKGVSAVRLFPLSGHMLLSCSMDCKIKLWEVYGDRRCLRTF----IGHGKAVRDICFNNA 344
Query: 77 GGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCG-KDSTVKL 135
G +++A+ D I+LWD + C+ N +D++ + G D +
Sbjct: 345 GTRFLSAAYDRYIKLWDTETGQCISRFTNRK-VPYCVKFNPDEDKQNLFVAGMSDKKIVQ 403
Query: 136 WEVSSGRLVKQY---LGATHTQLRFQAVFND-TEEFVLSIDEPSNEIVIWD 182
W++ SG +V++Y LGA +T VF D FV + D+ S + WD
Sbjct: 404 WDIRSGEIVQEYDRHLGAVNT-----IVFVDENRRFVSTSDDKSLRVWEWD 449
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 160 (61.4 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 51/204 (25%), Positives = 87/204 (42%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
V VSF P ++LL+ ++ L+ + TF C + N + ++S G +V
Sbjct: 502 VYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYK----GHNYPVWDTQFSPFGYYFV 557
Query: 82 TASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSG 141
+ D RLW +R G H A+ T F + +V + D TV+LW+V +G
Sbjct: 558 SGGHDRVARLWATDHYQPLRIFAG-H-LADVTCTRFHPNSNYVATGSSDRTVRLWDVLNG 615
Query: 142 RLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPR 201
V+ + G H F+ +F+ S +++WD +A+ H G
Sbjct: 616 NCVRIFTG--HKGPIHSLAFSPNGKFLAS-GSTDGRVLLWDIGHGLMIAELKG-HTGTIY 671
Query: 202 WIEHSPAEAAFITCGT-DRSVRFW 224
++ S + I G+ D +VR W
Sbjct: 672 ALKFS-RDGEIIASGSIDNTVRLW 694
Score = 153 (58.9 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 42/171 (24%), Positives = 76/171 (44%)
Query: 20 HN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCY--LSANVPEISVNGAINQVRYSS 75
HN V F P G + ++G +A L+ + +Q + ++ +++ R+
Sbjct: 540 HNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCT------RFHP 593
Query: 76 TGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKL 135
T S D +RLWD ++ NCVR G G + + F+ + +F+ S D V L
Sbjct: 594 NSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLA--FSPNGKFLASGSTDGRVLL 651
Query: 136 WEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTA 186
W++ G ++ + G HT + F+ E + S N + +WD + A
Sbjct: 652 WDIGHGLMIAELKG--HTGTIYALKFSRDGEIIAS-GSIDNTVRLWDVMRA 699
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 158 (60.7 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 42/122 (34%), Positives = 68/122 (55%)
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLS 126
++N V+YSS G+ VTAS D +R WD + +C+R I+ AH A A + + +F++S
Sbjct: 349 SVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIR-IIHAHQRGIAC-AQY--NGKFIVS 404
Query: 127 CGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTA 186
D T++++E SSG+L++ G H L FND E ++S + IW+ T
Sbjct: 405 GSSDLTIRIFEASSGKLLRMLQG--HEDLIRTVRFND--EKIVS-GGYDGTVRIWNFNTG 459
Query: 187 EK 188
E+
Sbjct: 460 EQ 461
Score = 123 (48.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 36/147 (24%), Positives = 68/147 (46%)
Query: 81 VTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSS 140
V+ SKD + +WD S + + G G+ +F + + ++S DST+ +W+ +
Sbjct: 235 VSGSKDRTVSVWDVNSRFILYKLYGHSGSV--LCLDFCRRRNLLVSGSSDSTIIIWDWQN 292
Query: 141 GRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW--DALT-AEKVAKWSSNHI 197
R +K Y G HT V + E +++S + +W DA + AE H+
Sbjct: 293 RRPLKVYFG--HTDNVLGVVVS--ENYIISSSR-DHTARVWRLDATSPAEACMHVLRGHL 347
Query: 198 GAPRWIEHSPAEAAFITCGTDRSVRFW 224
+ +++S +T +DR++R W
Sbjct: 348 ASVNSVQYSSKTGLIVTASSDRTLRTW 374
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 157 (60.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 51/207 (24%), Positives = 93/207 (44%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGA-INQVRYSSTG 77
T + +SF+P + G+ A L+D+ + + V ++ + A I + ++++G
Sbjct: 177 TAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGE-----EVFTLTGHSAEIISLSFNTSG 231
Query: 78 GMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWE 137
+T S D + +W+ + V +++G H AE +SA F D +L+ D T KLW+
Sbjct: 232 NRIITGSFDHTVTVWEADTGRKVYTLIG-H-CAEISSAVFNWDCSLILTGSMDKTCKLWD 289
Query: 138 VSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHI 197
+G+ V G H + F+ T + + + I+ A T E V K H
Sbjct: 290 AVNGKCVATLTG--HDDEILDSCFDYTGKLIATASADGTAR-IFSAATRECVTKLEG-HE 345
Query: 198 GAPRWIEHSPAEAAFITCGTDRSVRFW 224
G I +P +T +D++ R W
Sbjct: 346 GEISKISFNPQGNRLLTGSSDKTARIW 372
Score = 135 (52.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 53/174 (30%), Positives = 81/174 (46%)
Query: 22 VRSVSFH-PSGDFLLAGTDHPIAHLYDVNTFQCY--LSANVPEISVNGAINQVRYSSTGG 78
V +++F+ P GD + G+ L+ V T +CY + EI V + N ST
Sbjct: 137 VYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEI-VCLSFNP---QST-- 190
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
+ T S D +LWD S V ++ G H +AE S +F +++ D TV +WE
Sbjct: 191 LVATGSMDTTAKLWDIQSGEEVFTLTG-H-SAEIISLSFNTSGNRIITGSFDHTVTVWEA 248
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVL--SIDEPSNEIVIWDALTAEKVA 190
+GR V +G H AVFN +L S+D+ +WDA+ + VA
Sbjct: 249 DTGRKVYTLIG--HCAEISSAVFNWDCSLILTGSMDKTCK---LWDAVNGKCVA 297
Score = 131 (51.2 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 37/174 (21%), Positives = 72/174 (41%)
Query: 8 TAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGA 67
T ++ + +I + S F+ +L G+ L+D +C + + + +
Sbjct: 250 TGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDS 309
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
+ TG + TAS DG R++ + CV + G G E + +F +L+
Sbjct: 310 C----FDYTGKLIATASADGTARIFSAATRECVTKLEGHEG--EISKISFNPQGNRLLTG 363
Query: 128 GKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
D T ++W+ +G+ ++ G HT F FN + +++ N IW
Sbjct: 364 SSDKTARIWDAQTGQCLQVLEG--HTDEIFSCAFNYKGDIIIT-GSKDNTCRIW 414
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 155 (59.6 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 61/209 (29%), Positives = 93/209 (44%)
Query: 24 SVSFHPSGDFLLA-GTDHPIAHLYDVNTFQCYLSANVPEISVN-GAINQVRYSSTGGMYV 81
+ FHP G+ LL+ G D I +++ V C NV +S + GA+ + ++ G
Sbjct: 60 TAEFHPEGELLLSSGFDRQI-YIWQVYE-DC---ENVMAMSGHSGAVMEAHFTPDGSHIF 114
Query: 82 TASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSG 141
T S D + WD + R G HG + + Q+ + S D T+K+W+
Sbjct: 115 TCSTDKTLAFWDIATGQRQRRFKG-HGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDAR-- 171
Query: 142 RLVKQYLGATHT-QLRFQ--AV-FNDTEEFVLS--IDEPSNEIVIWDALTAEKVAKWSSN 195
K++ A HT + FQ AV F DT E V+S ID NE+ IWD + + V
Sbjct: 172 ---KKH--AAHTLESPFQVTAVCFGDTGEQVISGGID---NEVKIWD-IRKQAVLHHLRG 222
Query: 196 HIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
H + SP +T D ++R W
Sbjct: 223 HSDTITGMSLSPEGDFILTNAMDNTLRVW 251
Score = 118 (46.6 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 50/228 (21%), Positives = 97/228 (42%)
Query: 1 FFDFSKATAKRAFRVIQDTHNVRSVSFHPSGDFLL-AGTDHPIAHLYDVNTFQCYLSANV 59
F+D AT +R R + V SV G LL +G+D ++D +A+
Sbjct: 124 FWDI--ATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKH---AAHT 178
Query: 60 PEISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTK 119
E + V + TG ++ D +++WD + V + H T + +
Sbjct: 179 LESPFQ--VTAVCFGDTGEQVISGGIDNEVKIWD-IRKQAVLHHLRGHSDT-ITGMSLSP 234
Query: 120 DQRFVLSCGKDSTVKLWEV---SSG-RLVKQYLGATHTQLR--FQAVFNDTEEFVLSIDE 173
+ F+L+ D+T+++W+V + G R VK + G H + + ++ + + S
Sbjct: 235 EGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITS-GS 293
Query: 174 PSNEIVIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSV 221
+ IWD T + K H G+ ++ SP E ++ +D+++
Sbjct: 294 ADRHVYIWDVNTRRILYKLPG-HNGSVNAVDFSPKEPLILSGSSDKTL 340
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 158 (60.7 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 47/173 (27%), Positives = 79/173 (45%)
Query: 20 HN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCY--LSANVPEISVNGAINQVRYSS 75
HN V F P G + ++G +A L+ + +Q + ++ +++ R+
Sbjct: 564 HNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCT------RFHP 617
Query: 76 TGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKL 135
T S D +RLWD ++ NCVR G G + + F+ + RF+ + D V L
Sbjct: 618 NSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLA--FSPNGRFLATGATDGRVLL 675
Query: 136 WEVSSGRLVKQYLGATHT--QLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTA 186
W++ G +V + G T T LRF D E +L+ N + +WDA+ A
Sbjct: 676 WDIGHGLMVGELKGHTDTIYALRFS---RDGE--ILASGSMDNTVRLWDAVKA 723
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 47/207 (22%), Positives = 83/207 (40%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
V SF P ++LL+ ++ L+ + TF C + N + ++S G +V
Sbjct: 526 VYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYK----GHNYPVWDTQFSPYGYYFV 581
Query: 82 TASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSG 141
+ D RLW +R G H A+ T F + ++ + D TV+LW+V +G
Sbjct: 582 SGGHDRVARLWATDHYQPLRIFAG-H-LADVTCTRFHPNSNYIATGSADRTVRLWDVLNG 639
Query: 142 RLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPR 201
V+ + G H F+ F L+ +++WD V + H
Sbjct: 640 NCVRIFTG--HKGPIHSLAFSPNGRF-LATGATDGRVLLWDIGHGLMVGELKG-HTDTIY 695
Query: 202 WIEHSPAEAAFITCGT-DRSVRFWKEI 227
+ S + + G+ D +VR W +
Sbjct: 696 ALRFS-RDGEILASGSMDNTVRLWDAV 721
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 156 (60.0 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 52/233 (22%), Positives = 93/233 (39%)
Query: 8 TAKRAFRVIQD-THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNG 66
+ KR ++++ ++ S+ F P GD L++G+ ++D+ T QC L+ +S+
Sbjct: 285 STKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLT-----LSIED 339
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSI----VGAHGTAEAT-SANFTKDQ 121
+ V S G + S D +R+WD + V + +G ++ S F+ +
Sbjct: 340 GVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNG 399
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQ------YLGATHTQLRFQAVFNDTEEFVLSIDEPS 175
+ S D TVKLW + G+ K+ Y+G H E++LS
Sbjct: 400 EQIASGSLDRTVKLWHLE-GKSDKKSTCEVTYIG--HKDFVLSVCCTPDNEYILS-GSKD 455
Query: 176 NEIVIWDALTAEKVAKWSSNH---IGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
++ WD + + + I + E F T D R WK
Sbjct: 456 RGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIWK 508
Score = 125 (49.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 45/214 (21%), Positives = 91/214 (42%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
+RSV F P G L G + + ++D++T + E I + + G V
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQD----IYSLDFFPDGDRLV 313
Query: 82 TASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSG 141
+ S D ++R+WD ++ C ++ G T+ + D + + + D TV++W+ ++G
Sbjct: 314 SGSGDRSVRIWDLRTSQCSLTLSIEDGV---TTVAVSPDGKLIAAGSLDRTVRVWDSTTG 370
Query: 142 RLVKQY-----LGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDAL-TAEKVAKWSSN 195
LV++ G H + F++ E + S + +W ++K +
Sbjct: 371 FLVERLDSGNENGNGHEDSVYSVAFSNNGEQIAS-GSLDRTVKLWHLEGKSDKKSTCEVT 429
Query: 196 HIGAPRWIEH---SPAEAAFITCGTDRSVRFWKE 226
+IG ++ +P ++ DR V FW +
Sbjct: 430 YIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQ 463
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 156 (60.0 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 52/233 (22%), Positives = 93/233 (39%)
Query: 8 TAKRAFRVIQD-THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNG 66
+ KR ++++ ++ S+ F P GD L++G+ ++D+ T QC L+ +S+
Sbjct: 285 STKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLT-----LSIED 339
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSI----VGAHGTAEAT-SANFTKDQ 121
+ V S G + S D +R+WD + V + +G ++ S F+ +
Sbjct: 340 GVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNG 399
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQ------YLGATHTQLRFQAVFNDTEEFVLSIDEPS 175
+ S D TVKLW + G+ K+ Y+G H E++LS
Sbjct: 400 EQIASGSLDRTVKLWHLE-GKSDKKSTCEVTYIG--HKDFVLSVCCTPDNEYILS-GSKD 455
Query: 176 NEIVIWDALTAEKVAKWSSNH---IGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
++ WD + + + I + E F T D R WK
Sbjct: 456 RGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIWK 508
Score = 125 (49.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 45/214 (21%), Positives = 91/214 (42%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
+RSV F P G L G + + ++D++T + E I + + G V
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQD----IYSLDFFPDGDRLV 313
Query: 82 TASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSG 141
+ S D ++R+WD ++ C ++ G T+ + D + + + D TV++W+ ++G
Sbjct: 314 SGSGDRSVRIWDLRTSQCSLTLSIEDGV---TTVAVSPDGKLIAAGSLDRTVRVWDSTTG 370
Query: 142 RLVKQY-----LGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDAL-TAEKVAKWSSN 195
LV++ G H + F++ E + S + +W ++K +
Sbjct: 371 FLVERLDSGNENGNGHEDSVYSVAFSNNGEQIAS-GSLDRTVKLWHLEGKSDKKSTCEVT 429
Query: 196 HIGAPRWIEH---SPAEAAFITCGTDRSVRFWKE 226
+IG ++ +P ++ DR V FW +
Sbjct: 430 YIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQ 463
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 155 (59.6 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 39/157 (24%), Positives = 76/157 (48%)
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
+ +++S G + +AS+D +RLW + S AH TA S +F+ D + +++
Sbjct: 63 VTSLQFSPQGNLLASASRDRTVRLWV-LDRKGKSSEFKAH-TAPVRSVDFSADGQLLVTA 120
Query: 128 GKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE 187
+D ++K+W + R + TH +R A F+ ++S E I IWD +
Sbjct: 121 SEDKSIKVWSMFRQRFLYSLYRHTHW-VRC-AKFSPDGRLIVSCSEDKT-IKIWDTTNKQ 177
Query: 188 KVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
V +S + +G +++ +P + G+D +V+ W
Sbjct: 178 CVNNFSDS-VGFANFVDFNPNGTCIASAGSDHAVKIW 213
Score = 152 (58.6 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 49/213 (23%), Positives = 93/213 (43%)
Query: 11 RAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGA-IN 69
RA+R + V S+ F P G+ L + + L+ ++ E + A +
Sbjct: 52 RAYRYVGHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDR-----KGKSSEFKAHTAPVR 106
Query: 70 QVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGK 129
V +S+ G + VTAS+D +I++W + S+ H T A F+ D R ++SC +
Sbjct: 107 SVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLY-RH-THWVRCAKFSPDGRLIVSCSE 164
Query: 130 DSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKV 189
D T+K+W+ ++ + V + + F FN + S + + IWD + K+
Sbjct: 165 DKTIKIWDTTNKQCVNNFSDSVGFA-NF-VDFNPNGTCIASAGS-DHAVKIWD-IRMNKL 220
Query: 190 AKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVR 222
+ H + P + +T +D +V+
Sbjct: 221 LQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVK 253
Score = 124 (48.7 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 41/169 (24%), Positives = 74/169 (43%)
Query: 13 FRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVR 72
+ + + TH VR F P G +++ ++ ++D QC N + SV G N V
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCV--NNFSD-SV-GFANFVD 193
Query: 73 YSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDST 132
++ G +A D A+++WD + N + H +F +++ D T
Sbjct: 194 FNPNGTCIASAGSDHAVKIWD-IRMNKLLQHYQVHSCG-VNCLSFHPLGNSLVTASSDGT 251
Query: 133 VKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
VK+ ++ GRL+ G HT F F+ E + S + +++IW
Sbjct: 252 VKMLDLIEGRLIYTLQG--HTGPVFTVSFSKDGELLTSGGADA-QVLIW 297
Score = 115 (45.5 bits), Expect = 0.00033, P = 0.00033
Identities = 31/116 (26%), Positives = 56/116 (48%)
Query: 25 VSFHPSGDFLL-AGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTA 83
V F+P+G + AG+DH + ++D+ + V VN + + G VTA
Sbjct: 192 VDFNPNGTCIASAGSDHAVK-IWDIRMNKLLQHYQVHSCGVNC----LSFHPLGNSLVTA 246
Query: 84 SKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVS 139
S DG +++ D + + ++ G H T + +F+KD + S G D+ V +W +
Sbjct: 247 SSDGTVKMLDLIEGRLIYTLQG-H-TGPVFTVSFSKDGELLTSGGADAQVLIWRTN 300
>ASPGD|ASPL0000032184 [details] [associations]
symbol:AN5196 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001305
EnsemblFungi:CADANIAT00003192 OMA:DHHLGPV Uniprot:C8VF70
Length = 531
Score = 155 (59.6 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 56/231 (24%), Positives = 102/231 (44%)
Query: 7 ATAKRAFRVIQDTHNVRSVSFHPSGDFLLAGT-------DHPIAHLYDVNTFQCYLSANV 59
A +K A DT V + FH S + G D I V + + Y+ +
Sbjct: 215 AMSKEATDYQDDTSKVETTEFHGSEQYDYLGRTYMHVPQDLDIDLKKPVGSIKNYVPKKL 274
Query: 60 PEI--SVNGAINQVRY-SSTGGMYVTASKDGAIRLWDGV-SANCVRSIVGAHGTAEATSA 115
S AI +R+ G + ++++ DG ++WD S +R+ G H A T
Sbjct: 275 VHTWKSHTKAITSLRFFPQAGHLLLSSAADGKAKIWDVYHSRELLRTFSG-HSKA-ITDT 332
Query: 116 NFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQY-LGATHTQLRFQAVFNDTEEFVLSIDEP 174
+F + L+ D +KLW+ +G+ + ++ G T +RF ++ EF+ + +
Sbjct: 333 DFHITGKTFLTASYDRQMKLWDTETGQCISRFSTGKTPHVIRFNPNPENSHEFLAGMSD- 391
Query: 175 SNEIVIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
+IV +D T E+V ++ +H+ A + FI+ D+S+R W+
Sbjct: 392 -KKIVQFDTRTGEQVQEYD-HHLAAINTLTFVDQNRRFISTSDDKSLRAWE 440
>POMBASE|SPBC15D4.14 [details] [associations]
symbol:taf73 "transcription factor TFIID complex subunit
Taf5-like" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=IC] [GO:0005669 "transcription factor TFIID complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0030071 "regulation of mitotic
metaphase/anaphase transition" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
PomBase:SPBC15D4.14 GO:GO:0005829 GO:GO:0006355 GO:GO:0030071
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 KO:K03130 HOGENOM:HOG000212424
EMBL:AB039954 PIR:T39490 RefSeq:NP_596254.1
ProteinModelPortal:O74319 IntAct:O74319 STRING:O74319
EnsemblFungi:SPBC15D4.14.1 GeneID:2539882 KEGG:spo:SPBC15D4.14
OMA:CATISED OrthoDB:EOG4CRQ92 NextBio:20801027 Uniprot:O74319
Length = 642
Score = 155 (59.6 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 52/210 (24%), Positives = 89/210 (42%)
Query: 15 VIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYS 74
+I T V VS P +F+L+ ++ L+ +T S V N I V++S
Sbjct: 399 LIGHTRPVFGVSISPQKEFILSCSEDGFTRLWSKDT----KSTIVKYAGHNAPIWDVQFS 454
Query: 75 STGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVK 134
G + TAS D RLWD A +R VG + S F + ++ + D T +
Sbjct: 455 PFGYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVS--FHPNAAYLATGSSDHTTR 512
Query: 135 LWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSS 194
+W+V +G V+ + A H+ + A+ + L+ + S I +WD ++ + +
Sbjct: 513 MWDVRTGGTVRVF-NAHHSPV--SALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVK 569
Query: 195 NHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
H + S ++ G D V FW
Sbjct: 570 -HSSIVYSLSFSYDNKILVSGGADTDVNFW 598
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 36/138 (26%), Positives = 65/138 (47%)
Query: 2 FDFSKATAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPE 61
+D A R F + ++V VSFHP+ +L G+ ++DV T N
Sbjct: 472 WDVEHAAPLRVF--VGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAH- 528
Query: 62 ISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
+ ++ + S+ G +A + G I++WD S+N S V H + S +F+ D
Sbjct: 529 ---HSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFV-KHSSI-VYSLSFSYDN 583
Query: 122 RFVLSCGKDSTVKLWEVS 139
+ ++S G D+ V W+++
Sbjct: 584 KILVSGGADTDVNFWDLT 601
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 152 (58.6 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 33/151 (21%), Positives = 73/151 (48%)
Query: 2 FDFSKATAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPE 61
+DF +R + T+ V+ + F +G+ L + + L+D T+ C + + +
Sbjct: 133 WDFESGEFERTLK--GHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHD 190
Query: 62 ISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
+V+ VR++ +G +++S+D I++W+ + C++++VG + + +D
Sbjct: 191 HNVSC----VRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVS--EDG 244
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGATH 152
+ SC D T+K W + G + Y +H
Sbjct: 245 SCIASCSNDQTIKTWNIVKGECLATYREHSH 275
Score = 148 (57.2 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 40/179 (22%), Positives = 82/179 (45%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNT--FQCYLSANVPEISVNGAINQVRYSSTGGM 79
+ SV FHPS +++ ++ ++D + F+ L + A+ + + TG +
Sbjct: 109 INSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHT------NAVQDIDFDKTGNL 162
Query: 80 YVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVS 139
+ S D I+LWD + +CV+++ G H + FT ++S +D T+K+WE +
Sbjct: 163 LASCSADLTIKLWDFQTYDCVKTLHG-HDH-NVSCVRFTPSGDQLISSSRDKTIKVWEAA 220
Query: 140 SGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSN-HI 197
+G +K +G H + ++ + S I W+ + E +A + + H+
Sbjct: 221 TGYCIKTLVG--HEDWVRKITVSEDGSCIASCSNDQT-IKTWNIVKGECLATYREHSHV 276
Score = 146 (56.5 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 42/157 (26%), Positives = 71/157 (45%)
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
IN V++ + + V+AS+D I++WD S R++ G H A +F K + SC
Sbjct: 109 INSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKG-HTNA-VQDIDFDKTGNLLASC 166
Query: 128 GKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE 187
D T+KLW+ + VK G H + F + + ++S I +W+A T
Sbjct: 167 SADLTIKLWDFQTYDCVKTLHGHDHNVSCVR--FTPSGDQLISSSRDKT-IKVWEAATGY 223
Query: 188 KVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+ K H R I S + +C D++++ W
Sbjct: 224 CI-KTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTW 259
Score = 118 (46.6 bits), Expect = 0.00012, P = 0.00012
Identities = 22/76 (28%), Positives = 40/76 (52%)
Query: 78 GMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWE 137
G T S+D I++W+ + C+ + +G A F +F+LS G D T+++W+
Sbjct: 317 GYLATGSRDKTIKIWELATGRCLATYIGHDNWVRAV--RFHPCGKFLLSVGDDKTIRVWD 374
Query: 138 VSSGRLVKQYLGATHT 153
++ GR +K + HT
Sbjct: 375 IAQGRCIKT-INEAHT 389
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 154 (59.3 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 50/215 (23%), Positives = 94/215 (43%)
Query: 16 IQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQ--CYLSANVPEISVNGAINQVRY 73
+Q V V F G ++ G + A ++DVNT + C L + + + + I V +
Sbjct: 296 LQHESVVCCVRFSADGKYVATGCNRS-AQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCF 354
Query: 74 SSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTV 133
S G T ++D IR+WD ++ +R H + S +F +D R + S D TV
Sbjct: 355 SPDGKYLATGAEDKQIRVWD-ITTRTIRIQFAGH-EQDIYSLDFARDGRTIASGSGDRTV 412
Query: 134 KLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVL-SIDEPSNEIVIWDALTAEKVAKW 192
+LW++ +G + + + A+ DT+ S+D+ + +WD V +
Sbjct: 413 RLWDIENGTALTVF--TIEDGVTTVAISPDTKYVAAGSLDK---SVRVWDLTQGCPVERL 467
Query: 193 SS--NHIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
H + + SP +T D++++ W+
Sbjct: 468 EGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWE 502
Score = 115 (45.5 bits), Expect = 0.00047, P = 0.00047
Identities = 49/217 (22%), Positives = 85/217 (39%)
Query: 21 NVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMY 80
++ S+ F G + +G+ L+D+ + ++ + V S
Sbjct: 390 DIYSLDFARDGRTIASGSGDRTVRLWDIEN-----GTALTVFTIEDGVTTVAISPDTKYV 444
Query: 81 VTASKDGAIRLWDGVSANC-VRSIVGAHGTAEAT-SANFTKDQRFVLSCGKDSTVKLWEV 138
S D ++R+WD ++ C V + G G ++ S F+ + R +++ D T+KLWE+
Sbjct: 445 AAGSLDKSVRVWD-LTQGCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWEL 503
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSID-EPSNEIVI----------WDALTAE 187
++ R Q G+ R F +FVLS+ P N+ V+ WD T
Sbjct: 504 ATPRGNMQNQGSKGG--RCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGS 561
Query: 188 KVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
H + + SP F T D R W
Sbjct: 562 -TQLMLQGHKNSVISVAPSPTGGFFATGSGDMRARIW 597
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 156 (60.0 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 52/212 (24%), Positives = 93/212 (43%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T V SV+F+ +LAG + L+D+ + + A S A V + G
Sbjct: 58 TSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKM-VRAFTGHRSNCSA---VEFHPFGE 113
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
+ S D +R+WD C+++ G H T ++ F+ D R+V+S G D+ VK+W++
Sbjct: 114 FLASGSSDTNLRVWDTRKKGCIQTYKG-H-TRGISTIEFSPDGRWVVSGGLDNVVKVWDL 171
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIG 198
++G+L+ ++ H F+ E F+L+ + WD T E + G
Sbjct: 172 TAGKLLHEF--KCHEGPIRSLDFHPLE-FLLATGSADRTVKFWDLETFELIGTTRPEATG 228
Query: 199 APRWIEHSPAEAAFITCGTDRSVRF--WKEIL 228
H + F CG D ++ W+ ++
Sbjct: 229 VRAIAFHPDGQTLF--CGLDDGLKVYSWEPVI 258
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 150 (57.9 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 50/191 (26%), Positives = 92/191 (48%)
Query: 2 FDFSKATAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTF-QCYLSANVP 60
+D +K + R F+ T +V SV+F +++G+ ++ NT +C + P
Sbjct: 97 WDITKGVSTRLFK--GHTQDVMSVAFSSDNRQIISGSRDATIKVW--NTLGECKFTLEGP 152
Query: 61 EISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKD 120
E + ++ +R+S V+ S D +++WD S C ++ H T + + D
Sbjct: 153 EAHQDW-VSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTD-H-TGYVNTVTISPD 209
Query: 121 QRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVI 180
S GKD+ LWE+SSG+ + + L A +T A+ ++ LS ++I+I
Sbjct: 210 GSLCASGGKDTFACLWELSSGKPLYK-LEARNT---INALAFSPNKYWLSA-ATDDKIII 264
Query: 181 WDALTAEKVAK 191
WD LT + +A+
Sbjct: 265 WDLLTKQVLAE 275
Score = 110 (43.8 bits), Expect = 0.00068, P = 0.00068
Identities = 39/159 (24%), Positives = 66/159 (41%)
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
+ V S G ++ S D +RLWD R G H T + S F+ D R ++S
Sbjct: 73 VQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKG-H-TQDVMSVAFSSDNRQIISG 130
Query: 128 GKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAV-FNDTEEFVLSIDEPSNEIVIWDALTA 186
+D+T+K+W + G G Q + F+ ++S N++ IWD + +
Sbjct: 131 SRDATIKVWN-TLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVS-GSWDNKVKIWD-IKS 187
Query: 187 EKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
K ++H G + SP + + G D W+
Sbjct: 188 FKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWE 226
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 154 (59.3 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 53/211 (25%), Positives = 90/211 (42%)
Query: 14 RVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRY 73
R++ + V +F P +LL+ ++ A L+ V+T +A V G + V +
Sbjct: 374 RLLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDT----KTALVAYKGHTGPVWDVAF 429
Query: 74 SSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTV 133
G + TAS D +LW +R G H ++ F + +VL+ D T
Sbjct: 430 GPFGHYFATASHDQTAQLWSCDHIYPLRVFAG-H-LSDVDCVTFHPNSAYVLTGSSDKTC 487
Query: 134 KLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWS 193
+LW+V G V+ + G HTQ AV + ++ + I +WD T ++ K
Sbjct: 488 RLWDVHRGHSVRVFNG--HTQ-PVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRI-KTM 543
Query: 194 SNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
H G + S ++ G+D +VR W
Sbjct: 544 RGHRGNIYSLSFSRESTVLVSGGSDCTVRAW 574
Score = 116 (45.9 bits), Expect = 0.00038, P = 0.00038
Identities = 30/118 (25%), Positives = 55/118 (46%)
Query: 21 NVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMY 80
+V V+FHP+ ++L G+ L+DV+ N + V + G
Sbjct: 465 DVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFN----GHTQPVTAVAIAPDGHTM 520
Query: 81 VTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
+A +G I LWD + ++++ G G + S F+++ ++S G D TV+ W+V
Sbjct: 521 ASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLS--FSRESTVLVSGGSDCTVRAWDV 576
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 154 (59.3 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 57/219 (26%), Positives = 100/219 (45%)
Query: 8 TAKRAFRVIQDTHNVRSVSFHPS-GDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNG 66
TA + ++ + NV S+ S G L G D +++ V + L
Sbjct: 9 TAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVAQLRHDLLTGHTT----- 63
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLS 126
I ++ S+ + V S+ G+IR+WD +A +R+++G H A S +F FV S
Sbjct: 64 PIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLG-H-KANICSLDFHPYGSFVAS 121
Query: 127 CGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTA 186
D+ +KLW+V + +Y +HTQ F+ +++ S + + + +WD LTA
Sbjct: 122 GSLDTDIKLWDVRRKGCIFKY--KSHTQAVRCLRFSPDGKWLASAAD-DHTVKLWD-LTA 177
Query: 187 EKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDR-SVRFW 224
KV + H G +E P+ + G+ ++RFW
Sbjct: 178 GKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFW 216
>TAIR|locus:2194589 [details] [associations]
symbol:AT1G10580 "AT1G10580" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 OMA:KRQKRGK
EMBL:BT030336 IPI:IPI00537876 RefSeq:NP_172528.2 UniGene:At.14984
ProteinModelPortal:A4FVN8 SMR:A4FVN8 IntAct:A4FVN8 STRING:A4FVN8
PaxDb:A4FVN8 PRIDE:A4FVN8 EnsemblPlants:AT1G10580.1 GeneID:837599
KEGG:ath:AT1G10580 TAIR:At1g10580 InParanoid:A4FVN8
PhylomeDB:A4FVN8 ProtClustDB:CLSN2690864 Genevestigator:A4FVN8
Uniprot:A4FVN8
Length = 573
Score = 153 (58.9 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 42/182 (23%), Positives = 80/182 (43%)
Query: 49 NTFQCYLSANVPEI--SVNGAINQVRY-SSTGGMYVTASKDGAIRLWDGV-SANCVRSIV 104
N CY+ + ++ +R+ G + ++A D +++WD S C+R+ +
Sbjct: 264 NNDHCYIPKRLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYM 323
Query: 105 GAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQY-LGATHTQLRFQAVFND 163
G H A F+ D L+ G D +K W+ +G+++ + G ++ +D
Sbjct: 324 G-HAKA-VRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNP--DD 379
Query: 164 TEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRF 223
++ +L +IV WD T E ++ H+GA I F+T D+S+R
Sbjct: 380 DKQNILLAGMSDKKIVQWDINTGEVTQEYDQ-HLGAVNTITFVDNNRRFVTSSDDKSLRV 438
Query: 224 WK 225
W+
Sbjct: 439 WE 440
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 154 (59.3 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 55/228 (24%), Positives = 91/228 (39%)
Query: 21 NVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMY 80
++ S+ + PSGD L++G+ ++D+ T QC L+ +S+ + V S G Y
Sbjct: 487 DIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLT-----LSIEDGVTTVAVSPGDGKY 541
Query: 81 VTA-SKDGAIRLWDGVSANCVRSIVGAH--GTAEATSAN---FTKDQRFVLSCGKDSTVK 134
+ A S D A+R+WD + V + + GT S FT+D + V+S D +VK
Sbjct: 542 IAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVK 601
Query: 135 LWEV------------SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWD 182
LW + +SG Y+G H +E++LS ++ WD
Sbjct: 602 LWNLQNANNKSDSKTPNSGTCEVTYIG--HKDFVLSVATTQNDEYILS-GSKDRGVLFWD 658
Query: 183 ALTAEKVAKWSSNH-----IGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
+ + + + P F T D R WK
Sbjct: 659 KKSGNPLLMLQGHRNSVISVAVANGSPLGPEYNVFATGSGDCKARIWK 706
Score = 126 (49.4 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 51/219 (23%), Positives = 89/219 (40%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
+RSV F P G FL G + + ++D+ + + E I + Y +G V
Sbjct: 446 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQD----IYSLDYFPSGDKLV 501
Query: 82 TASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSG 141
+ S D +R+WD + C ++ G T A D +++ + D V++W+ +G
Sbjct: 502 SGSGDRTVRIWDLRTGQCSLTLSIEDGVT--TVAVSPGDGKYIAAGSLDRAVRVWDSETG 559
Query: 142 RLVKQY-----LGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNH 196
LV++ G H + VF + V+S + +W+ A + + +
Sbjct: 560 FLVERLDSENESGTGHKDSVYSVVFTRDGQSVVS-GSLDRSVKLWNLQNANNKSDSKTPN 618
Query: 197 IGAPR--WIEH-----SPAEAA---FITCGT-DRSVRFW 224
G +I H S A +I G+ DR V FW
Sbjct: 619 SGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFW 657
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 153 (58.9 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 56/216 (25%), Positives = 95/216 (43%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCY--LSANVPEISVNGAINQVRYSSTGGM 79
VRSV+F P G +L G + ++D+ + Y L+ + EI + +S G
Sbjct: 349 VRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIY------SLDFSKDGKT 402
Query: 80 YVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVS 139
V+ S D + LWD V A + I+ H T+ F+ D +F+ + D +++W S
Sbjct: 403 LVSGSGDRTVCLWD-VEAGEQKLIL--HTDDGVTTVMFSPDGQFIAAGSLDKVIRIW-TS 458
Query: 140 SGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAK--WSSNHI 197
SG LV+Q G H + + F+ ++++S N I +W+ VA + I
Sbjct: 459 SGTLVEQLHG--HEESVYSVAFSPDGKYLVS-GSLDNTIKLWELQCVSNVAPSMYKEGGI 515
Query: 198 GAPRWIEH---------SPAEAAFITCGTDRSVRFW 224
+ H SP I+ DR+++FW
Sbjct: 516 CKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFW 551
Score = 125 (49.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 54/216 (25%), Positives = 94/216 (43%)
Query: 16 IQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGA--INQVRY 73
++ T + V F G FL G + A +++V T + G + V +
Sbjct: 296 LEHTSVICYVRFSADGKFLATGCNRA-AMVFNVETGKLITLLQEESSKREGDLYVRSVAF 354
Query: 74 SSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTV 133
S G T +D IR+WD R + G H E S +F+KD + ++S D TV
Sbjct: 355 SPDGKYLATGVEDQQIRIWDIAQKRVYRLLTG-H-EQEIYSLDFSKDGKTLVSGSGDRTV 412
Query: 134 KLWEVSSGRLVKQYLGATHTQLRFQAV-FNDTEEFVL--SIDEPSNEIVIWDALTAEKVA 190
LW+V +G +Q L HT V F+ +F+ S+D+ I IW + + +
Sbjct: 413 CLWDVEAG---EQKL-ILHTDDGVTTVMFSPDGQFIAAGSLDKV---IRIWTS--SGTLV 463
Query: 191 KWSSNHIGAPRWIEHSPAEAAFITCGT-DRSVRFWK 225
+ H + + SP + ++ G+ D +++ W+
Sbjct: 464 EQLHGHEESVYSVAFSP-DGKYLVSGSLDNTIKLWE 498
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 42/175 (24%), Positives = 78/175 (44%)
Query: 10 KRAFRVIQD-THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAI 68
KR +R++ + S+ F G L++G+ L+DV + L + + +
Sbjct: 378 KRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHTDD-----GV 432
Query: 69 NQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEAT-SANFTKDQRFVLSC 127
V +S G S D IR+W S V + HG E+ S F+ D ++++S
Sbjct: 433 TTVMFSPDGQFIAAGSLDKVIRIWTS-SGTLVEQL---HGHEESVYSVAFSPDGKYLVSG 488
Query: 128 GKDSTVKLWEVSSGRLVKQYLGATHTQLRF-QAVFNDTEEFVLSID-EPSNEIVI 180
D+T+KLWE+ + V + + + + F ++F+LS+ P + +I
Sbjct: 489 SLDNTIKLWEL---QCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWII 540
>CGD|CAL0003392 [details] [associations]
symbol:PWP2 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030515 "snoRNA
binding" evidence=IEA] [GO:0034388 "Pwp2p-containing subcomplex of
90S preribosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030010 "establishment of cell polarity" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 154 (59.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 38/158 (24%), Positives = 70/158 (44%)
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLS 126
++N + YS G VT S DG I++WD S C+ + H T+ T F K + + S
Sbjct: 341 SMNTLCYSPDGSRLVTGSDDGKIKIWDVRSGFCLMTFT-EH-TSAVTQVQFAKRGQVLFS 398
Query: 127 CGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTA 186
D T++ W++ R K + + Q AV + + E ++ + + EI +W T
Sbjct: 399 SSLDGTIRAWDLIRFRNFKTFTATSRVQFNCLAV-DPSGEVIVGGSQDTFEIYVWSVQTG 457
Query: 187 EKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+ + + H G + + + D+++R W
Sbjct: 458 QLLDSLTG-HEGPISCLTFGKENSILASASWDKTIRIW 494
>UNIPROTKB|Q5A852 [details] [associations]
symbol:PWP2 "Putative uncharacterized protein PWP2"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 154 (59.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 38/158 (24%), Positives = 70/158 (44%)
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLS 126
++N + YS G VT S DG I++WD S C+ + H T+ T F K + + S
Sbjct: 341 SMNTLCYSPDGSRLVTGSDDGKIKIWDVRSGFCLMTFT-EH-TSAVTQVQFAKRGQVLFS 398
Query: 127 CGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTA 186
D T++ W++ R K + + Q AV + + E ++ + + EI +W T
Sbjct: 399 SSLDGTIRAWDLIRFRNFKTFTATSRVQFNCLAV-DPSGEVIVGGSQDTFEIYVWSVQTG 457
Query: 187 EKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+ + + H G + + + D+++R W
Sbjct: 458 QLLDSLTG-HEGPISCLTFGKENSILASASWDKTIRIW 494
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 152 (58.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 52/204 (25%), Positives = 99/204 (48%)
Query: 25 VSFHPSGDFLLAGTDHPIAHLYDVNTFQCY--LSANVPEISVNGAINQVRYSSTGGMYVT 82
V F +G +L G + A+++DV T + L P+ S + + + +S G VT
Sbjct: 319 VKFSNNGKYLATGCNQA-ANVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFSPDGKYLVT 377
Query: 83 ASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGR 142
++D I+LWD +S VR + H + S +F+ + RF++S D T +LW+V +G+
Sbjct: 378 GTEDRQIKLWD-LSTQKVRYVFSGH-EQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQ 435
Query: 143 -LVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPR 201
++K + T + ND V S+D+ I +W +++ V + H +
Sbjct: 436 CILKLEIENGVTAIAISP--NDQFIAVGSLDQI---IRVW-SVSGTLVERLEG-HKESVY 488
Query: 202 WIEHSPAEAAFITCGTDRSVRFWK 225
I SP + ++ D++++ W+
Sbjct: 489 SIAFSPDSSILLSGSLDKTIKVWE 512
Score = 152 (58.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 61/240 (25%), Positives = 108/240 (45%)
Query: 4 FSKATAKRAFRVIQDTHN------VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQC-YLS 56
F T K+ F + +++ + VR+++F P G +L+ GT+ L+D++T + Y+
Sbjct: 339 FDVQTGKKLFTLHEESPDPSRDLYVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVF 398
Query: 57 ANVPEISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHG-TAEATSA 115
+ + I + +S G V+ S D RLWD + C+ + +G TA A S
Sbjct: 399 SGHEQ-----DIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENGVTAIAISP 453
Query: 116 NFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPS 175
N DQ F+ D +++W VS G LV++ G H + + F+ +LS
Sbjct: 454 N---DQ-FIAVGSLDQIIRVWSVS-GTLVERLEG--HKESVYSIAFSPDSSILLS-GSLD 505
Query: 176 NEIVIWD----------ALTAEKVAKWS-SNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
I +W+ A+ E + K + + H + SP ++ DRS++FW
Sbjct: 506 KTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFW 565
>UNIPROTKB|Q9AV81 [details] [associations]
symbol:PUB72 "U-box domain-containing protein 72"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005618 GO:GO:0009507
GO:GO:0046686 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0042742 eggNOG:COG2319 EMBL:DP000086
EMBL:AP008216 EMBL:CM000147 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
ProtClustDB:CLSN2687671 EMBL:AC022457 EMBL:AK064778
RefSeq:NP_001064804.1 UniGene:Os.37656 ProteinModelPortal:Q9AV81
STRING:Q9AV81 PRIDE:Q9AV81 GeneID:4348844 KEGG:dosa:Os10t0466300-01
KEGG:osa:4348844 Gramene:Q9AV81 Uniprot:Q9AV81
Length = 527
Score = 151 (58.2 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 49/208 (23%), Positives = 90/208 (43%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQ--CYLSANVPEISVNGAINQVRYSSTGGM 79
+ S+ HPS D + G A L+D + Q C L+ + +I+ +++ +
Sbjct: 224 ILSMDIHPSKDIIATGGIDTNAVLFDRPSGQILCTLTGHSKKIT------SLKFVPRDEL 277
Query: 80 YVTASKDGAIRLWDGVSA---NCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLW 136
+VT S D +++W G NC+ ++ H TAE + Q++ ++ KD+T +
Sbjct: 278 FVTGSADKTVKIWQGSEEGNYNCIHTLKD-H-TAEVEAVTVHATQKYFVTASKDNTWCFY 335
Query: 137 EVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNH 196
++ SG + Q +G + Q + + + +L + IWD T VAK+ H
Sbjct: 336 DIPSGSCLTQ-VGESSGQEGYTSASFHPDGLILGTGTTEAVVKIWDVKTQSNVAKFEG-H 393
Query: 197 IGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+G + S T D V+ W
Sbjct: 394 VGPVTAMSFSENGYFLATAALD-GVKLW 420
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 148 (57.2 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 59/203 (29%), Positives = 95/203 (46%)
Query: 27 FHPSGDFLLA-GTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTASK 85
FHP+G L + G D I +++V C A + S GA+ ++ Y++ G + +AS
Sbjct: 64 FHPNGATLASSGYDRLIL-MWNVYG-DCENYATLKGHS--GAVMELHYNTDGSLLFSAST 119
Query: 86 DGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC-GKDS-TVKLWEVSSGRL 143
D + +WD + V+ + G H T+ S F + L+C G D TVKLW++
Sbjct: 120 DKTVCVWDSETGERVKRLKG-H-TSFVNSC-FPARRGPQLACTGSDDGTVKLWDIRKKAS 176
Query: 144 VKQYLGATHTQLRFQAVFNDTEEFVLS--IDEPSNEIVIWDALTAEKVAKWSSNHIGAPR 201
V + T+ L FNDT + ++S ID N+I +WD L K+ H +
Sbjct: 177 VHTFQN-TYQVL--SVTFNDTSDQIISGGID---NDIKVWD-LRQNKLIYSMQGHGDSVT 229
Query: 202 WIEHSPAEAAFITCGTDRSVRFW 224
+ S + ++ D SVR W
Sbjct: 230 GLSLSADGSYLLSNSMDNSVRVW 252
>ZFIN|ZDB-GENE-050116-3 [details] [associations]
symbol:cdc40 "cell division cycle 40 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050116-3 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 CTD:51362
HOVERGEN:HBG053695 EMBL:BC088381 IPI:IPI00489031
RefSeq:NP_001009990.1 UniGene:Dr.30056 ProteinModelPortal:Q5I0F8
STRING:Q5I0F8 GeneID:494534 KEGG:dre:494534 NextBio:20865726
Uniprot:Q5I0F8
Length = 578
Score = 151 (58.2 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 44/180 (24%), Positives = 82/180 (45%)
Query: 52 QCYLSANVPEISVNGA--INQVR-YSSTGGMYVTASKDGAIRLWDGVSAN-CVRSIVGAH 107
+CYL + ++ +R + +G + ++ S D I+LW+ + CVR+ +G H
Sbjct: 272 KCYLPKKQLHVWTGHTKGVSAIRLFPKSGHLLLSCSMDCKIKLWEVYNERRCVRTFIG-H 330
Query: 108 GTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEF 167
A F LS D +KLW+ +G+ + ++ T+ ++ + FN E+
Sbjct: 331 SKA-VRDVCFNNSGTQFLSAAYDRYIKLWDSETGQCISRF---TNRKVPYCVKFNPDEDK 386
Query: 168 --VLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
+L +IV WD + E V ++ H+GA I F++ D+S+R W+
Sbjct: 387 QNLLVAGMSDKKIVQWDIRSGEVVQEYD-RHLGAVNTITFVDENRRFVSTSDDKSLRVWE 445
Score = 129 (50.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 43/170 (25%), Positives = 81/170 (47%)
Query: 19 THNVRSVSFHP-SGDFLLAGTDHPIAHLYDV-NTFQCYLSANVPEISVNGAINQVRYSST 76
T V ++ P SG LL+ + L++V N +C + I + A+ V ++++
Sbjct: 287 TKGVSAIRLFPKSGHLLLSCSMDCKIKLWEVYNERRCVRTF----IGHSKAVRDVCFNNS 342
Query: 77 GGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCG-KDSTVKL 135
G +++A+ D I+LWD + C+ N +D++ +L G D +
Sbjct: 343 GTQFLSAAYDRYIKLWDSETGQCISRFTNRK-VPYCVKFNPDEDKQNLLVAGMSDKKIVQ 401
Query: 136 WEVSSGRLVKQY---LGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWD 182
W++ SG +V++Y LGA +T + F ++ FV + D+ S + WD
Sbjct: 402 WDIRSGEVVQEYDRHLGAVNT-ITF---VDENRRFVSTSDDKSLRVWEWD 447
>RGD|1307063 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 IPI:IPI01016587
Ensembl:ENSRNOT00000064081 UCSC:RGD:1307063 ArrayExpress:F1LTB9
Uniprot:F1LTB9
Length = 444
Score = 149 (57.5 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 49/184 (26%), Positives = 89/184 (48%)
Query: 52 QCYLSANVPEISV-NG---AINQVR-YSSTGGMYVTASKDGAIRLWDGVS-ANCVRSIVG 105
+CYL +I V +G ++ VR + +G + ++ S D I+LW+ C+R+ +G
Sbjct: 138 KCYLPKK--QIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIG 195
Query: 106 AHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTE 165
H A T +F LS D +KLW+ +G+ + ++ T+ ++ + FN E
Sbjct: 196 -HSKAVRDICFNTAGTQF-LSAAYDRYLKLWDTETGQCISRF---TNRKVPYCVKFNPDE 250
Query: 166 E----FVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSV 221
+ FV + + +IV WD + E V ++ H+GA I F++ D+S+
Sbjct: 251 DKQNLFVAGMSD--KKIVQWDIRSGEIVQEYD-RHLGAVNTIVFVDENRRFVSTSDDKSL 307
Query: 222 RFWK 225
R W+
Sbjct: 308 RVWE 311
Score = 114 (45.2 bits), Expect = 0.00039, P = 0.00039
Identities = 42/171 (24%), Positives = 77/171 (45%)
Query: 19 THNVRSVSFHP-SGDFLLAGTDHPIAHLYDV-NTFQCYLSANVPEISVNGAINQVRYSST 76
T V +V P SG LL+ + L++V +C + I + A+ + +++
Sbjct: 153 TKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTF----IGHSKAVRDICFNTA 208
Query: 77 GGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCG-KDSTVKL 135
G +++A+ D ++LWD + C+ N +D++ + G D +
Sbjct: 209 GTQFLSAAYDRYLKLWDTETGQCISRFTNRK-VPYCVKFNPDEDKQNLFVAGMSDKKIVQ 267
Query: 136 WEVSSGRLVKQY---LGATHTQLRFQAVFND-TEEFVLSIDEPSNEIVIWD 182
W++ SG +V++Y LGA +T VF D FV + D+ S + WD
Sbjct: 268 WDIRSGEIVQEYDRHLGAVNT-----IVFVDENRRFVSTSDDKSLRVWEWD 313
>UNIPROTKB|F1LMQ0 [details] [associations]
symbol:Cdc40 "Protein Cdc40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 IPI:IPI00870547
Ensembl:ENSRNOT00000000709 ArrayExpress:F1LMQ0 Uniprot:F1LMQ0
Length = 447
Score = 149 (57.5 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 49/184 (26%), Positives = 89/184 (48%)
Query: 52 QCYLSANVPEISV-NG---AINQVR-YSSTGGMYVTASKDGAIRLWDGVS-ANCVRSIVG 105
+CYL +I V +G ++ VR + +G + ++ S D I+LW+ C+R+ +G
Sbjct: 141 KCYLPKK--QIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIG 198
Query: 106 AHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTE 165
H A T +F LS D +KLW+ +G+ + ++ T+ ++ + FN E
Sbjct: 199 -HSKAVRDICFNTAGTQF-LSAAYDRYLKLWDTETGQCISRF---TNRKVPYCVKFNPDE 253
Query: 166 E----FVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSV 221
+ FV + + +IV WD + E V ++ H+GA I F++ D+S+
Sbjct: 254 DKQNLFVAGMSD--KKIVQWDIRSGEIVQEYD-RHLGAVNTIVFVDENRRFVSTSDDKSL 310
Query: 222 RFWK 225
R W+
Sbjct: 311 RVWE 314
Score = 114 (45.2 bits), Expect = 0.00039, P = 0.00039
Identities = 42/171 (24%), Positives = 77/171 (45%)
Query: 19 THNVRSVSFHP-SGDFLLAGTDHPIAHLYDV-NTFQCYLSANVPEISVNGAINQVRYSST 76
T V +V P SG LL+ + L++V +C + I + A+ + +++
Sbjct: 156 TKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTF----IGHSKAVRDICFNTA 211
Query: 77 GGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCG-KDSTVKL 135
G +++A+ D ++LWD + C+ N +D++ + G D +
Sbjct: 212 GTQFLSAAYDRYLKLWDTETGQCISRFTNRK-VPYCVKFNPDEDKQNLFVAGMSDKKIVQ 270
Query: 136 WEVSSGRLVKQY---LGATHTQLRFQAVFND-TEEFVLSIDEPSNEIVIWD 182
W++ SG +V++Y LGA +T VF D FV + D+ S + WD
Sbjct: 271 WDIRSGEIVQEYDRHLGAVNT-----IVFVDENRRFVSTSDDKSLRVWEWD 316
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 148 (57.2 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 48/209 (22%), Positives = 90/209 (43%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQ--CYLSANVPEISVNGAINQVRYSST 76
T +VRSV F G LL +D L+ V+ + C L + N + R+S
Sbjct: 102 TGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREH------NNWVRCARFSPD 155
Query: 77 GGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLW 136
G + V+ S D ++LWD S + + G + + +F + + D+TV++W
Sbjct: 156 GQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYS--SYVDFHPSSTCIATASSDNTVRVW 213
Query: 137 EVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNH 196
++ + L++ Y H+ F+ + +L+ S + I D L ++ H
Sbjct: 214 DIRTHTLLQHY--QVHSAAVNALSFHPSGNHLLTASSDST-LKILDLLEG-RLLYTLHGH 269
Query: 197 IGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
G+ + S + F + G+D+ V W+
Sbjct: 270 QGSASCVSFSRSGDQFASAGSDQQVMVWR 298
Score = 145 (56.1 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 48/219 (21%), Positives = 101/219 (46%)
Query: 8 TAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNT-FQCYLSANVPEISVNG 66
T +R F+ +D + S+ F PSG + +G+ ++++ + Y +
Sbjct: 9 TLERNFKGHRDA--ITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKD----- 61
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLW-DGVSANCVRSIVGAHGTAEATSANFTKDQRFVL 125
A+ V++S + + ++S+D +RLW V V + AH T S F+ D + +L
Sbjct: 62 AVTCVQFSPSAHLLASSSRDKTVRLWVPSVKGESV--LFRAH-TGSVRSVCFSADGQSLL 118
Query: 126 SCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALT 185
+ D ++KLW V +++ L + +R A F+ + ++S+ + + +WDA +
Sbjct: 119 TASDDQSIKLWSVHRQKIICT-LREHNNWVRC-ARFSPDGQLMVSVSD-DRTVKLWDASS 175
Query: 186 AEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+ + + G +++ P+ T +D +VR W
Sbjct: 176 RQLIHTFCEPG-GYSSYVDFHPSSTCIATASSDNTVRVW 213
Score = 129 (50.5 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 52/214 (24%), Positives = 91/214 (42%)
Query: 11 RAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQ 70
RA+R V V F PS L + + L+ V + + +V + G++
Sbjct: 52 RAYRFTGHKDAVTCVQFSPSAHLLASSSRDKTVRLW-VPSVK---GESVLFRAHTGSVRS 107
Query: 71 VRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKD 130
V +S+ G +TAS D +I+LW V + + H A F+ D + ++S D
Sbjct: 108 VCFSADGQSLLTASDDQSIKLWS-VHRQKIICTLREHNNW-VRCARFSPDGQLMVSVSDD 165
Query: 131 STVKLWEVSSGRLVKQYL--GATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEK 188
TVKLW+ SS +L+ + G + + F + T S D N + +WD T
Sbjct: 166 RTVKLWDASSRQLIHTFCEPGGYSSYVDFHP--SSTCIATASSD---NTVRVWDIRTHTL 220
Query: 189 VAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVR 222
+ + H A + P+ +T +D +++
Sbjct: 221 LQHYQV-HSAAVNALSFHPSGNHLLTASSDSTLK 253
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 145 (56.1 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 49/206 (23%), Positives = 86/206 (41%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
V +F P G LL +D +++ + + G + +S G +
Sbjct: 29 VNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRL----AGHRGPVKSCCFSPDGRLIA 84
Query: 82 TASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSG 141
++S D +IRLWD + C+ + G + E S F+ D + + S G D +WEV SG
Sbjct: 85 SSSSDHSIRLWDVARSKCLHVLKGHQRSVETVS--FSPDSKQLASGGWDKRAIVWEVQSG 142
Query: 142 RLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSS--NHIGA 199
R V +G H + F+ T + L+ + + IWD + V + + H G
Sbjct: 143 RRVHLLVG--HCDSIQSSDFSPTSDS-LATGSWDSTVHIWDLRASTPVVSYHNLEGHTGN 199
Query: 200 PRWIEHSPAEAAFITCGTDRSVRFWK 225
+ +S A + D+++ WK
Sbjct: 200 ISCLCYS-ASGLLASGSWDKTICVWK 224
Score = 125 (49.1 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 36/160 (22%), Positives = 67/160 (41%)
Query: 65 NGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFV 124
+G +N +S G +TAS DG + +W S + + G G + S F+ D R +
Sbjct: 26 HGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVK--SCCFSPDGRLI 83
Query: 125 LSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDAL 184
S D +++LW+V+ + + G H Q + V + L+ ++W+
Sbjct: 84 ASSSSDHSIRLWDVARSKCLHVLKG--H-QRSVETVSFSPDSKQLASGGWDKRAIVWEVQ 140
Query: 185 TAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+ +V H + + + SP + T D +V W
Sbjct: 141 SGRRV-HLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIW 179
Score = 116 (45.9 bits), Expect = 0.00011, P = 0.00011
Identities = 35/142 (24%), Positives = 67/142 (47%)
Query: 8 TAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGA 67
+ +R ++ +++S F P+ D L G+ H++D+ +S + E G
Sbjct: 141 SGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLE-GHTGN 199
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
I+ + YS++G + + S D I +W + N + G H T S F+ D+ + S
Sbjct: 200 ISCLCYSASG-LLASGSWDKTICVWKPTTNNLPLQLKG-H-TIWVNSLAFSPDELKLASA 256
Query: 128 GKDSTVKLWEVSSGRLVKQYLG 149
G TVK+W+ +G+ ++ G
Sbjct: 257 GYSRTVKVWDCLTGKCLETLKG 278
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 128 (50.1 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 29/97 (29%), Positives = 46/97 (47%)
Query: 86 DGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVK 145
D +RLW N VR G G S +F+ + +++ S G+D +KLW+++SG L K
Sbjct: 1 DKTVRLWSAQQGNSVRLFTGHRGPV--LSLSFSPNGKYLASAGEDQRLKLWDLASGTLFK 58
Query: 146 QYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWD 182
+ G HT F+ + S N + +WD
Sbjct: 59 ELRG--HTDSITSLAFSPDSGLIASASM-DNSVRVWD 92
Score = 99 (39.9 bits), Expect = 0.00053, P = 0.00053
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 66 GAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVL 125
G + + +S G +A +D ++LWD S + + G H T TS F+ D +
Sbjct: 23 GPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRG-H-TDSITSLAFSPDSGLIA 80
Query: 126 SCGKDSTVKLWEVSS 140
S D++V++W++ S
Sbjct: 81 SASMDNSVRVWDIRS 95
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 147 (56.8 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 54/224 (24%), Positives = 99/224 (44%)
Query: 20 HNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGM 79
HNV SV+ P+GD +++ + +++V T C + + VR + G +
Sbjct: 193 HNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFT----GHREWVRMVRPNQDGTL 248
Query: 80 YVTASKDGAIRLWDGVSANC---VRS---IV--------GAHGT-AEATSANFTKDQR-- 122
+ S D +R+W + C +R +V AH T +EAT + K +
Sbjct: 249 LASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPG 308
Query: 123 -FVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
F+LS +D T+K+W++S+G + +G H +F+ FV+S + + IW
Sbjct: 309 PFLLSGSRDKTIKMWDISTGMCLMTLVG--HDNWVRGVLFHPGGRFVVSCADDKT-LRIW 365
Query: 182 DALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
D ++ K S H ++ A +T D++V+ W+
Sbjct: 366 DYKN-KRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWE 408
Score = 130 (50.8 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 32/130 (24%), Positives = 61/130 (46%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHL--YDVNTFQCYLSANVPEISVNGAINQVRYSSTGGM 79
V V FHP +++ ++ + Y+ F+ L + ++ + + TG +
Sbjct: 111 VTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTD------SVQDISFDQTGKL 164
Query: 80 YVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVS 139
+ S D I+LWD C+R++ G H +S + ++S +D T+K+WEV+
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHG-HDH-NVSSVAIMPNGDHIVSASRDKTMKMWEVA 222
Query: 140 SGRLVKQYLG 149
+G VK + G
Sbjct: 223 TGYCVKTFTG 232
Score = 129 (50.5 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 35/157 (22%), Positives = 71/157 (45%)
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
+ +V + + V+AS+D I++WD + + R++ G H T +F + + + SC
Sbjct: 111 VTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKG-H-TDSVQDISFDQTGKLLASC 168
Query: 128 GKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE 187
D T+KLW+ ++ G H + A+ + + V + + + ++ W+ T
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHN-VSSVAIMPNGDHIVSASRDKTMKM--WEVATGY 225
Query: 188 KVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
V K + H R + + +C D++VR W
Sbjct: 226 CV-KTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVW 261
Score = 123 (48.4 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 30/122 (24%), Positives = 58/122 (47%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T +V+ +SF +G L + + L+D F+C + + + +V+ V G
Sbjct: 150 TDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS----VAIMPNGD 205
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
V+AS+D +++W+ + CV++ G N +D + SC D TV++W V
Sbjct: 206 HIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPN--QDGTLLASCSNDQTVRVWVV 263
Query: 139 SS 140
++
Sbjct: 264 AT 265
>UNIPROTKB|F1MBS9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:DAAA02025907 IPI:IPI00707746
UniGene:Bt.35848 Ensembl:ENSBTAT00000000526 Uniprot:F1MBS9
Length = 579
Score = 149 (57.5 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 49/184 (26%), Positives = 89/184 (48%)
Query: 52 QCYLSANVPEISV-NG---AINQVR-YSSTGGMYVTASKDGAIRLWDGVS-ANCVRSIVG 105
+CYL +I V +G ++ VR + +G + ++ S D I+LW+ C+R+ +G
Sbjct: 273 KCYLPKK--QIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIG 330
Query: 106 AHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTE 165
H A T +F LS D +KLW+ +G+ + ++ T+ ++ + FN E
Sbjct: 331 -HSKAVRDICFNTAGTQF-LSAAYDRYLKLWDTETGQCISRF---TNRKVPYCVKFNPDE 385
Query: 166 E----FVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSV 221
+ FV + + +IV WD + E V ++ H+GA I F++ D+S+
Sbjct: 386 DKQNLFVAGMSD--KKIVQWDIRSGEIVQEYD-RHLGAVNTIVFVDENRRFVSTSDDKSL 442
Query: 222 RFWK 225
R W+
Sbjct: 443 RVWE 446
Score = 114 (45.2 bits), Expect = 0.00057, P = 0.00057
Identities = 42/171 (24%), Positives = 77/171 (45%)
Query: 19 THNVRSVSFHP-SGDFLLAGTDHPIAHLYDV-NTFQCYLSANVPEISVNGAINQVRYSST 76
T V +V P SG LL+ + L++V +C + I + A+ + +++
Sbjct: 288 TKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTF----IGHSKAVRDICFNTA 343
Query: 77 GGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCG-KDSTVKL 135
G +++A+ D ++LWD + C+ N +D++ + G D +
Sbjct: 344 GTQFLSAAYDRYLKLWDTETGQCISRFTNRK-VPYCVKFNPDEDKQNLFVAGMSDKKIVQ 402
Query: 136 WEVSSGRLVKQY---LGATHTQLRFQAVFND-TEEFVLSIDEPSNEIVIWD 182
W++ SG +V++Y LGA +T VF D FV + D+ S + WD
Sbjct: 403 WDIRSGEIVQEYDRHLGAVNT-----IVFVDENRRFVSTSDDKSLRVWEWD 448
>UNIPROTKB|O60508 [details] [associations]
symbol:CDC40 "Pre-mRNA-processing factor 17" species:9606
"Homo sapiens" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0006369
"termination of RNA polymerase II transcription" evidence=TAS]
[GO:0006406 "mRNA export from nucleus" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0031124 "mRNA 3'-end processing" evidence=TAS]
Reactome:REACT_71 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AF038392 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Reactome:REACT_1675 GO:GO:0006406 GO:GO:0000398 GO:GO:0071013
KO:K12816 Reactome:REACT_1788 GO:GO:0006369 GO:GO:0031124
Reactome:REACT_78 EMBL:AL671518 EMBL:AK314601 EMBL:BC117145
EMBL:BC126114 EMBL:AF061241 EMBL:AF015044 IPI:IPI00026307
RefSeq:NP_056975.1 UniGene:Hs.428147 ProteinModelPortal:O60508
SMR:O60508 IntAct:O60508 STRING:O60508 PhosphoSite:O60508
PaxDb:O60508 PRIDE:O60508 DNASU:51362 Ensembl:ENST00000307731
Ensembl:ENST00000368932 GeneID:51362 KEGG:hsa:51362 UCSC:uc003pua.3
CTD:51362 GeneCards:GC06P110501 HGNC:HGNC:17350 MIM:605585
neXtProt:NX_O60508 PharmGKB:PA134891332 HOGENOM:HOG000214672
HOVERGEN:HBG053695 InParanoid:O60508 OMA:KRQKRGK OrthoDB:EOG4HQDHZ
PhylomeDB:O60508 GenomeRNAi:51362 NextBio:54822 PMAP-CutDB:O60508
ArrayExpress:O60508 Bgee:O60508 CleanEx:HS_CDC40
Genevestigator:O60508 GermOnline:ENSG00000168438 Uniprot:O60508
Length = 579
Score = 149 (57.5 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 49/184 (26%), Positives = 89/184 (48%)
Query: 52 QCYLSANVPEISV-NG---AINQVR-YSSTGGMYVTASKDGAIRLWDGVSAN-CVRSIVG 105
+CYL +I V +G ++ VR + +G + ++ S D I+LW+ C+R+ +G
Sbjct: 273 KCYLPKK--QIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGERRCLRTFIG 330
Query: 106 AHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTE 165
H A T +F LS D +KLW+ +G+ + ++ T+ ++ + FN E
Sbjct: 331 -HSKAVRDICFNTAGTQF-LSAAYDRYLKLWDTETGQCISRF---TNRKVPYCVKFNPDE 385
Query: 166 E----FVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSV 221
+ FV + + +IV WD + E V ++ H+GA I F++ D+S+
Sbjct: 386 DKQNLFVAGMSD--KKIVQWDIRSGEIVQEYD-RHLGAVNTIVFVDENRRFVSTSDDKSL 442
Query: 222 RFWK 225
R W+
Sbjct: 443 RVWE 446
Score = 114 (45.2 bits), Expect = 0.00057, P = 0.00057
Identities = 42/171 (24%), Positives = 77/171 (45%)
Query: 19 THNVRSVSFHP-SGDFLLAGTDHPIAHLYDV-NTFQCYLSANVPEISVNGAINQVRYSST 76
T V +V P SG LL+ + L++V +C + I + A+ + +++
Sbjct: 288 TKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGERRCLRTF----IGHSKAVRDICFNTA 343
Query: 77 GGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCG-KDSTVKL 135
G +++A+ D ++LWD + C+ N +D++ + G D +
Sbjct: 344 GTQFLSAAYDRYLKLWDTETGQCISRFTNRK-VPYCVKFNPDEDKQNLFVAGMSDKKIVQ 402
Query: 136 WEVSSGRLVKQY---LGATHTQLRFQAVFND-TEEFVLSIDEPSNEIVIWD 182
W++ SG +V++Y LGA +T VF D FV + D+ S + WD
Sbjct: 403 WDIRSGEIVQEYDRHLGAVNT-----IVFVDENRRFVSTSDDKSLRVWEWD 448
>UNIPROTKB|F1RSY9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 KO:K12816 CTD:51362 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:CU915312 RefSeq:XP_003121400.3
UniGene:Ssc.95331 Ensembl:ENSSSCT00000004866 GeneID:100511111
KEGG:ssc:100511111 Uniprot:F1RSY9
Length = 579
Score = 149 (57.5 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 49/184 (26%), Positives = 89/184 (48%)
Query: 52 QCYLSANVPEISV-NG---AINQVR-YSSTGGMYVTASKDGAIRLWDGVS-ANCVRSIVG 105
+CYL +I V +G ++ VR + +G + ++ S D I+LW+ C+R+ +G
Sbjct: 273 KCYLPKK--QIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIG 330
Query: 106 AHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTE 165
H A T +F LS D +KLW+ +G+ + ++ T+ ++ + FN E
Sbjct: 331 -HSKAVRDICFNTAGTQF-LSAAYDRYLKLWDTETGQCISRF---TNRKVPYCVKFNPDE 385
Query: 166 E----FVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSV 221
+ FV + + +IV WD + E V ++ H+GA I F++ D+S+
Sbjct: 386 DKQNLFVAGMSD--KKIVQWDIRSGEIVQEYD-RHLGAVNTIVFVDENRRFVSTSDDKSL 442
Query: 222 RFWK 225
R W+
Sbjct: 443 RVWE 446
Score = 114 (45.2 bits), Expect = 0.00057, P = 0.00057
Identities = 42/171 (24%), Positives = 77/171 (45%)
Query: 19 THNVRSVSFHP-SGDFLLAGTDHPIAHLYDV-NTFQCYLSANVPEISVNGAINQVRYSST 76
T V +V P SG LL+ + L++V +C + I + A+ + +++
Sbjct: 288 TKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTF----IGHSKAVRDICFNTA 343
Query: 77 GGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCG-KDSTVKL 135
G +++A+ D ++LWD + C+ N +D++ + G D +
Sbjct: 344 GTQFLSAAYDRYLKLWDTETGQCISRFTNRK-VPYCVKFNPDEDKQNLFVAGMSDKKIVQ 402
Query: 136 WEVSSGRLVKQY---LGATHTQLRFQAVFND-TEEFVLSIDEPSNEIVIWD 182
W++ SG +V++Y LGA +T VF D FV + D+ S + WD
Sbjct: 403 WDIRSGEIVQEYDRHLGAVNT-----IVFVDENRRFVSTSDDKSLRVWEWD 448
>MGI|MGI:1918963 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1918963 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006397 GO:GO:0071013
KO:K12816 CTD:51362 HOGENOM:HOG000214672 HOVERGEN:HBG053695
OMA:KRQKRGK OrthoDB:EOG4HQDHZ EMBL:AK004569 EMBL:BC147503
EMBL:BC158078 IPI:IPI00120145 RefSeq:NP_082155.1 UniGene:Mm.46063
ProteinModelPortal:Q9DC48 SMR:Q9DC48 STRING:Q9DC48
PhosphoSite:Q9DC48 PaxDb:Q9DC48 PRIDE:Q9DC48
Ensembl:ENSMUST00000044166 GeneID:71713 KEGG:mmu:71713
UCSC:uc007exe.2 GeneTree:ENSGT00530000063583 InParanoid:B2RY33
ChiTaRS:CDC40 NextBio:334307 Bgee:Q9DC48 CleanEx:MM_CDC40
Genevestigator:Q9DC48 GermOnline:ENSMUSG00000038446 Uniprot:Q9DC48
Length = 579
Score = 149 (57.5 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 49/184 (26%), Positives = 89/184 (48%)
Query: 52 QCYLSANVPEISV-NG---AINQVR-YSSTGGMYVTASKDGAIRLWDGVS-ANCVRSIVG 105
+CYL +I V +G ++ VR + +G + ++ S D I+LW+ C+R+ +G
Sbjct: 273 KCYLPKK--QIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIG 330
Query: 106 AHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTE 165
H A T +F LS D +KLW+ +G+ + ++ T+ ++ + FN E
Sbjct: 331 -HSKAVRDICFNTAGTQF-LSAAYDRYLKLWDTETGQCISRF---TNRKVPYCVKFNPDE 385
Query: 166 E----FVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSV 221
+ FV + + +IV WD + E V ++ H+GA I F++ D+S+
Sbjct: 386 DKQNLFVAGMSD--KKIVQWDIRSGEIVQEYD-RHLGAVNTIVFVDENRRFVSTSDDKSL 442
Query: 222 RFWK 225
R W+
Sbjct: 443 RVWE 446
Score = 114 (45.2 bits), Expect = 0.00057, P = 0.00057
Identities = 42/171 (24%), Positives = 77/171 (45%)
Query: 19 THNVRSVSFHP-SGDFLLAGTDHPIAHLYDV-NTFQCYLSANVPEISVNGAINQVRYSST 76
T V +V P SG LL+ + L++V +C + I + A+ + +++
Sbjct: 288 TKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTF----IGHSKAVRDICFNTA 343
Query: 77 GGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCG-KDSTVKL 135
G +++A+ D ++LWD + C+ N +D++ + G D +
Sbjct: 344 GTQFLSAAYDRYLKLWDTETGQCISRFTNRK-VPYCVKFNPDEDKQNLFVAGMSDKKIVQ 402
Query: 136 WEVSSGRLVKQY---LGATHTQLRFQAVFND-TEEFVLSIDEPSNEIVIWD 182
W++ SG +V++Y LGA +T VF D FV + D+ S + WD
Sbjct: 403 WDIRSGEIVQEYDRHLGAVNT-----IVFVDENRRFVSTSDDKSLRVWEWD 448
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 150 (57.9 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 53/212 (25%), Positives = 92/212 (43%)
Query: 14 RVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRY 73
++I + V VSF P +LL+ ++ L+ ++T+ +S + V++
Sbjct: 512 KLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYK----GHTQPVWDVKF 567
Query: 74 SSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTV 133
S G +VTAS D RLW +R G H + F + +V + D T
Sbjct: 568 SPLGHYFVTASHDQTARLWATDHIYPLRIFAG-H-INDVDCVEFHPNSNYVFTGSSDKTC 625
Query: 134 KLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWS 193
++W+V +G V+ +LG T++ + AV D ++ S E I +WD + ++ K
Sbjct: 626 RMWDVHTGNCVRVFLGHTNS-VNCLAVSPDGR-WLASGGE-DGIICVWDIGSGRRL-KSM 681
Query: 194 SNHIGAPRWIEHSPAEAAFITCG-TDRSVRFW 224
H A + + + G D SVR W
Sbjct: 682 RGHARASLYSLAFSRDGTVLVSGCADNSVRVW 713
Score = 131 (51.2 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 32/119 (26%), Positives = 61/119 (51%)
Query: 20 HNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGM 79
++V V FHP+ +++ G+ ++DV+T C V + ++N + S G
Sbjct: 602 NDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNC---VRV-FLGHTNSVNCLAVSPDGRW 657
Query: 80 YVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
+ +DG I +WD S ++S+ G H A S F++D ++S D++V++W+V
Sbjct: 658 LASGGEDGIICVWDIGSGRRLKSMRG-HARASLYSLAFSRDGTVLVSGCADNSVRVWDV 715
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 144 (55.7 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 45/181 (24%), Positives = 87/181 (48%)
Query: 4 FSKATAKRAFRVIQDTHN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPE 61
F T K+ + + DT + S+++ P G +L +G I +++D+ T + +
Sbjct: 133 FGVETGKKEYSL--DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 190
Query: 62 ISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
+ I + +S+ + VTAS DG I+++D A+ ++ G HG+ A F+ D
Sbjct: 191 MP----IRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSG-HGSWVLNVA-FSPDD 244
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
+S D +VK+W+VS+ V +L H + +N ++S+ + EI ++
Sbjct: 245 AHFVSSSSDKSVKVWDVSARTCVHTFLD--HQDQVWGVKYNRNGSKIVSVGD-DQEIHVY 301
Query: 182 D 182
D
Sbjct: 302 D 302
>UNIPROTKB|E2RSW2 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:AAEX03008598
Ensembl:ENSCAFT00000006230 NextBio:20850941 Uniprot:E2RSW2
Length = 663
Score = 149 (57.5 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 49/184 (26%), Positives = 89/184 (48%)
Query: 52 QCYLSANVPEISV-NG---AINQVR-YSSTGGMYVTASKDGAIRLWDGVS-ANCVRSIVG 105
+CYL +I V +G ++ VR + +G + ++ S D I+LW+ C+R+ +G
Sbjct: 357 KCYLPKK--QIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIG 414
Query: 106 AHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTE 165
H A T +F LS D +KLW+ +G+ + ++ T+ ++ + FN E
Sbjct: 415 -HSKAVRDICFNTAGTQF-LSAAYDRYLKLWDTETGQCISRF---TNRKVPYCVKFNPDE 469
Query: 166 E----FVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSV 221
+ FV + + +IV WD + E V ++ H+GA I F++ D+S+
Sbjct: 470 DKQNLFVAGMSD--KKIVQWDIRSGEIVQEYD-RHLGAVNTIVFVDENRRFVSTSDDKSL 526
Query: 222 RFWK 225
R W+
Sbjct: 527 RVWE 530
Score = 114 (45.2 bits), Expect = 0.00068, P = 0.00068
Identities = 42/171 (24%), Positives = 77/171 (45%)
Query: 19 THNVRSVSFHP-SGDFLLAGTDHPIAHLYDV-NTFQCYLSANVPEISVNGAINQVRYSST 76
T V +V P SG LL+ + L++V +C + I + A+ + +++
Sbjct: 372 TKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTF----IGHSKAVRDICFNTA 427
Query: 77 GGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCG-KDSTVKL 135
G +++A+ D ++LWD + C+ N +D++ + G D +
Sbjct: 428 GTQFLSAAYDRYLKLWDTETGQCISRFTNRK-VPYCVKFNPDEDKQNLFVAGMSDKKIVQ 486
Query: 136 WEVSSGRLVKQY---LGATHTQLRFQAVFND-TEEFVLSIDEPSNEIVIWD 182
W++ SG +V++Y LGA +T VF D FV + D+ S + WD
Sbjct: 487 WDIRSGEIVQEYDRHLGAVNT-----IVFVDENRRFVSTSDDKSLRVWEWD 532
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 146 (56.5 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 52/208 (25%), Positives = 93/208 (44%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
VRSV F +G +L +D A ++ V Q ++S+ + N + ++S G +
Sbjct: 105 VRSVDFDSTGHLMLTASDDKSAKIWRVARRQ-FVSSFAQQ---NNWVRSAKFSPNGKLVA 160
Query: 82 TASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFV-LSCGKDSTVKLWEVSS 140
TAS D ++R++D S CVR+ + + + V L C + +K+++VS
Sbjct: 161 TASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNMLAVALGCNR---IKIFDVSG 217
Query: 141 GRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAP 200
+L++ Y+ H+ F+ + F+LS + I I D L + + H A
Sbjct: 218 SQLLQLYV--VHSAPVNDVAFHPSGHFLLSGSD-DRTIRILDLLEGRPIYTLTG-HTDAV 273
Query: 201 RWIEHSPAEAAFITCGTDRSVRFWKEIL 228
+ S F T G+DR + W+ L
Sbjct: 274 NAVAFSRDGDKFATGGSDRQLLVWQSNL 301
Score = 130 (50.8 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 39/161 (24%), Positives = 71/161 (44%)
Query: 65 NGAINQVRYSSTGGMYVTASKDGAIRLWD-GVSANCVRSIVGAHGTAEATSANFTKDQRF 123
+G I Q+R+ G T+S D + LW+ +A C+R +H +A ++
Sbjct: 18 SGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIR--FASH-SAPVNGVAWSPKGNL 74
Query: 124 VLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDA 183
V S G D TVK+WE + +++ H++ F+ T +L+ + + IW
Sbjct: 75 VASAGHDRTVKIWEPKLRGVSGEFVA--HSKAVRSVDFDSTGHLMLTASDDKSA-KIWRV 131
Query: 184 LTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+ V+ ++ + R + SP T D+SVR +
Sbjct: 132 ARRQFVSSFAQQNNWV-RSAKFSPNGKLVATASDDKSVRIY 171
Score = 117 (46.2 bits), Expect = 0.00014, P = 0.00014
Identities = 41/178 (23%), Positives = 76/178 (42%)
Query: 9 AKRAF--RVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNG 66
A+R F Q + VRS F P+G + +D +YDV++ +C +
Sbjct: 132 ARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFT----EERA 187
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLS 126
A Q+ + G M A I+++D VS + + + H +A F F+LS
Sbjct: 188 APRQLAWHPWGNMLAVALGCNRIKIFD-VSGSQLLQLYVVH-SAPVNDVAFHPSGHFLLS 245
Query: 127 CGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFN-DTEEFVLSIDEPSNEIVIWDA 183
D T+++ ++ GR + G HT F+ D ++F + ++++W +
Sbjct: 246 GSDDRTIRILDLLEGRPIYTLTG--HTDAVNAVAFSRDGDKFATGGSD--RQLLVWQS 299
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 153 (58.9 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 50/203 (24%), Positives = 81/203 (39%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
V SVSF L + + ++D T +L N E N + V +S +
Sbjct: 266 VGSVSFSHDSRLLASASGDGTVKIWDTAT--SFLQ-NTLE-GHNEWVKSVVFSHDSRLLA 321
Query: 82 TASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSG 141
+AS DG +++WD + R + G H + S F+ D R + S D TV++WE ++G
Sbjct: 322 SASDDGTVKIWDTATGTLQRMLKG-HNDS-VRSVVFSHDSRLIASGSNDRTVRIWETTTG 379
Query: 142 RLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPR 201
L ++ H F + S + N + IWD T + H
Sbjct: 380 LL--RHTFEDHEDSVMAVSFAHDSRRLASASDGGN-VKIWDTRTGS-LQNVLEGHDDCVN 435
Query: 202 WIEHSPAEAAFITCGTDRSVRFW 224
+ SP + DR+V+ W
Sbjct: 436 SVSFSPDSRLLASASDDRTVKIW 458
Score = 139 (54.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 49/223 (21%), Positives = 88/223 (39%)
Query: 2 FDFSKATAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPE 61
+D + T +R + D+ VRSV F + +G++ +++ T + E
Sbjct: 332 WDTATGTLQRMLKGHNDS--VRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHE 389
Query: 62 ISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
SV V ++ +AS G +++WD +++++ H S +F+ D
Sbjct: 390 DSVMA----VSFAHDSRRLASASDGGNVKIWD-TRTGSLQNVLEGHDDC-VNSVSFSPDS 443
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
R + S D TVK+W ++G L + G H VF+ + S + + IW
Sbjct: 444 RLLASASDDRTVKIWHAATGSLQRTLEG--HNDWVRSVVFSHDSRLIASASDDMT-VKIW 500
Query: 182 DALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
D T S H R + S + D +V+ W
Sbjct: 501 DTATVPLQNNLES-HDNWVRSVVFSHDSRLLASASDDMTVKIW 542
Score = 132 (51.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 40/165 (24%), Positives = 72/165 (43%)
Query: 20 HN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTG 77
HN VRSV F + + +D ++D T L N+ S + + V +S
Sbjct: 472 HNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVP--LQNNLE--SHDNWVRSVVFSHDS 527
Query: 78 GMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWE 137
+ +AS D +++WD + + ++ G H S +F+ D R + S D TVK+W
Sbjct: 528 RLLASASDDMTVKIWDTATGSLENTLEG-HDD-RVNSVSFSPDSRLLASASDDGTVKIWY 585
Query: 138 VSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWD 182
++G + + G+ + F+ T + S + + IWD
Sbjct: 586 AATGTVQHTFDGSGRVAISL--AFSHTSNLLASAMDDGT-VKIWD 627
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 30/119 (25%), Positives = 54/119 (45%)
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLS 126
A+ V +S + +AS DG +++WD ++ ++ G + + S F+ D R + S
Sbjct: 265 AVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVK--SVVFSHDSRLLAS 322
Query: 127 CGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALT 185
D TVK+W+ ++G L + G H VF+ + S + IW+ T
Sbjct: 323 ASDDGTVKIWDTATGTLQRMLKG--HNDSVRSVVFSHDSRLIAS-GSNDRTVRIWETTT 378
>ZFIN|ZDB-GENE-040426-916 [details] [associations]
symbol:smu1 "smu-1 suppressor of mec-8 and unc-52
homolog (C. elegans)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
ZFIN:ZDB-GENE-040426-916 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 CTD:55234
HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0
EMBL:BC045945 IPI:IPI00505889 RefSeq:NP_956493.1 UniGene:Dr.31728
ProteinModelPortal:Q7ZVA0 STRING:Q7ZVA0 PRIDE:Q7ZVA0 GeneID:393168
KEGG:dre:393168 InParanoid:Q7ZVA0 NextBio:20814238
ArrayExpress:Q7ZVA0 Uniprot:Q7ZVA0
Length = 513
Score = 147 (56.8 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 42/182 (23%), Positives = 81/182 (44%)
Query: 17 QDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCY--LSANVPE--ISVNGAINQVR 72
Q +H V F P G +L+ G+ +++ T + L + + ++ A+ +
Sbjct: 213 QKSH-VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMS 271
Query: 73 YSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDST 132
+S M T ++DG I++W S C+R AH T +F+KD +LS D T
Sbjct: 272 FSRDTEMLATGAQDGKIKVWKIQSGQCLRRYERAHSKG-VTCLSFSKDSTQILSASFDQT 330
Query: 133 VKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKW 192
+++ + SG+ +K++ G H+ +A +S + +W+ T E + +
Sbjct: 331 IRIHGLKSGKCLKEFRG--HSSFVNEATLTPDGHHAISASSDGT-VKVWNMKTTECTSTF 387
Query: 193 SS 194
S
Sbjct: 388 KS 389
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 145 (56.1 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 52/205 (25%), Positives = 93/205 (45%)
Query: 21 NVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNG---AINQVRYSSTG 77
++ V FHP +++ ++ ++D T + Y E S+ G ++ V + + G
Sbjct: 110 SITRVIFHPIFALMVSASEDATIRIWDFETGE-Y------ERSLKGHTDSVQDVAFDAQG 162
Query: 78 GMYVTASKDGAIRLWD-GVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLW 136
+ + S D +I+LWD S C++++ G H +S F +VLS +D T+K+W
Sbjct: 163 KLLASCSADLSIKLWDFQQSYECIKTMHG-HDH-NVSSVAFVPAGDYVLSASRDRTIKMW 220
Query: 137 EVSSGRLVKQYLGATHTQ-LRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE-KVAKWSS 194
EV++G VK Y G H + +R V + F ++ + I +W + + KV
Sbjct: 221 EVATGYCVKTYTG--HREWVRMVRVHIEGSIFATCSNDQT--IRVWLTNSKDCKVELRDH 276
Query: 195 NH-IGAPRWIEHSPAEAAFITCGTD 218
H + W + A A G D
Sbjct: 277 EHTVECIAWAPEAAASAINEAAGAD 301
Score = 136 (52.9 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 56/224 (25%), Positives = 94/224 (41%)
Query: 20 HNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGM 79
HNV SV+F P+GD++L+ + +++V T C + + VR G +
Sbjct: 194 HNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYT----GHREWVRMVRVHIEGSI 249
Query: 80 YVTASKDGAIRLWDGVSANC----------VRSIVGAHGTA-----EATSANFTKDQR-- 122
+ T S D IR+W S +C V I A A EA A+ K
Sbjct: 250 FATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQG 309
Query: 123 -FVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
F+ S +D T+++W+VS G + G H F+ ++++S + I +W
Sbjct: 310 PFLASGSRDKTIRIWDVSVGLCLLTLSG--HDNWVRGLAFHPGGKYLVSASDDKT-IRVW 366
Query: 182 DALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
D L ++ K H I+ A I+ D++V+ W+
Sbjct: 367 D-LRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 409
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 146 (56.5 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 39/145 (26%), Positives = 63/145 (43%)
Query: 80 YVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVS 139
+VT S D I++WD S S+ G T + T+ ++ SCG+D VK W++
Sbjct: 218 FVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVS-TRSP-YLFSCGEDKQVKCWDLE 275
Query: 140 SGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGA 199
++++ Y G H + + T + +++ S IWD T V S H A
Sbjct: 276 YNKVIRHYHG--HLSAVYGLDLHPTIDVLVTCSRDSTAR-IWDVRTKASVHTLSG-HTNA 331
Query: 200 PRWIEHSPAEAAFITCGTDRSVRFW 224
+ AE IT D ++R W
Sbjct: 332 VATVRCQAAEPQIITGSHDTTIRLW 356
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 146 (56.5 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 39/145 (26%), Positives = 63/145 (43%)
Query: 80 YVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVS 139
+VT S D I++WD S S+ G T + T+ ++ SCG+D VK W++
Sbjct: 218 FVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVS-TRSP-YLFSCGEDKQVKCWDLE 275
Query: 140 SGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGA 199
++++ Y G H + + T + +++ S IWD T V S H A
Sbjct: 276 YNKVIRHYHG--HLSAVYGLDLHPTLDVLVTCSRDSTAR-IWDVRTKASVHTLSG-HTNA 331
Query: 200 PRWIEHSPAEAAFITCGTDRSVRFW 224
+ AE IT D ++R W
Sbjct: 332 VATVRCQAAEPQIITGSHDTTIRLW 356
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 146 (56.5 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 39/145 (26%), Positives = 63/145 (43%)
Query: 80 YVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVS 139
+VT S D I++WD S S+ G T + T+ ++ SCG+D VK W++
Sbjct: 219 FVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVS-TRSP-YLFSCGEDKQVKCWDLE 276
Query: 140 SGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGA 199
++++ Y G H + + T + +++ S IWD T V S H A
Sbjct: 277 YNKVIRHYHG--HLSAVYGLDLHPTIDVLVTCSRDSTAR-IWDVRTKASVHTLSG-HTNA 332
Query: 200 PRWIEHSPAEAAFITCGTDRSVRFW 224
+ AE IT D ++R W
Sbjct: 333 VATVRCQAAEPQIITGSHDTTIRLW 357
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 146 (56.5 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 39/145 (26%), Positives = 63/145 (43%)
Query: 80 YVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVS 139
+VT S D I++WD S S+ G T + T+ ++ SCG+D VK W++
Sbjct: 219 FVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVS-TRSP-YLFSCGEDKQVKCWDLE 276
Query: 140 SGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGA 199
++++ Y G H + + T + +++ S IWD T V S H A
Sbjct: 277 YNKVIRHYHG--HLSAVYGLDLHPTIDVLVTCSRDSTAR-IWDVRTKASVHTLSG-HTNA 332
Query: 200 PRWIEHSPAEAAFITCGTDRSVRFW 224
+ AE IT D ++R W
Sbjct: 333 VATVRCQAAEPQIITGSHDTTIRLW 357
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 146 (56.5 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 39/145 (26%), Positives = 63/145 (43%)
Query: 80 YVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVS 139
+VT S D I++WD S S+ G T + T+ ++ SCG+D VK W++
Sbjct: 220 FVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVS-TRSP-YLFSCGEDKQVKCWDLE 277
Query: 140 SGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGA 199
++++ Y G H + + T + +++ S IWD T V S H A
Sbjct: 278 YNKVIRHYHG--HLSAVYGLDLHPTIDVLVTCSRDSTAR-IWDVRTKASVHTLSG-HTNA 333
Query: 200 PRWIEHSPAEAAFITCGTDRSVRFW 224
+ AE IT D ++R W
Sbjct: 334 VATVRCQAAEPQIITGSHDTTIRLW 358
>POMBASE|SPAC343.04c [details] [associations]
symbol:SPAC343.04c "WD repeat protein, human WDR26
family, ubiquitin ligase complex subunit (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0034657 "GID complex" evidence=ISO] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0044732 "mitotic spindle pole body" evidence=IDA] [GO:0045721
"negative regulation of gluconeogenesis" evidence=ISO] [GO:0010969
"regulation of pheromone-dependent signal transduction involved in
conjugation with cellular fusion" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 PomBase:SPAC343.04c GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044732
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045721
HSSP:P16649 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GO:GO:0034657 OrthoDB:EOG43R6WJ HOGENOM:HOG000160946 OMA:IRGQFYQ
PIR:T38653 RefSeq:NP_593424.1 ProteinModelPortal:Q9UT85
EnsemblFungi:SPAC343.04c.1 GeneID:2543079 KEGG:spo:SPAC343.04c
NextBio:20804107 Uniprot:Q9UT85
Length = 507
Score = 138 (53.6 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 46/201 (22%), Positives = 92/201 (45%)
Query: 29 PSG-DFLLAGTDHPIAHLYDVNTFQCYL--SANVPEISVNGAINQVRYSSTGGMYVTASK 85
P G F+ D I H + +N Y N+ ++++ + + G + ++
Sbjct: 306 PDGLSFITGSPDCHITH-WSLNGEILYKWEDVNIYDMALTS--DGTKLYIVGFEQLINAE 362
Query: 86 DGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVK 145
D I ++ + C++ I ++ TS +KD ++ L+ + T LW++ R+V+
Sbjct: 363 DKHIAIYSVETRECIKKI---SLQSKVTSICLSKDSKYALTNLEPHTTFLWDLEENRIVR 419
Query: 146 QYLGATHTQLRFQAVFNDTEE-FVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIE 204
QY+G + F ++ FVLS E ++I IW + + +A S H+ ++
Sbjct: 420 QYMGHKLGNFLIGSCFGGKDDTFVLSGSE-DDKIRIWHRESGKLLATLSG-HVKCVNYVA 477
Query: 205 HSPAEA-AFITCGTDRSVRFW 224
++P + F + G D +VR W
Sbjct: 478 YNPVDPYQFASAGDDNTVRIW 498
Score = 45 (20.9 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 4 FSKATAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNT 50
F KR FR+I V + + P +LL+ + L+D T
Sbjct: 240 FDVVNLKRVFRLIGHIDTVAYIRWSPDDRYLLSCSCDKSVILWDAFT 286
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 142 (55.0 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 37/118 (31%), Positives = 58/118 (49%)
Query: 66 GAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVL 125
GA+ R++ G +T KD IRLW+ +++ +HG E + T D
Sbjct: 19 GAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYK-SHGR-EVRDVHVTSDNAKFC 76
Query: 126 SCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAV-FNDTEEFVLSIDEPSNEIVIWD 182
SCG D V W+VS+GR+++++ G H AV FND+ V+S + +WD
Sbjct: 77 SCGGDRQVYYWDVSTGRVIRKFRG--HDG-EVNAVKFNDSSSVVVSAGF-DRSLRVWD 130
Score = 141 (54.7 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 35/123 (28%), Positives = 60/123 (48%)
Query: 103 IVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATH-TQLRFQAVF 161
I+ H A +A F D + L+CGKD T++LW G L+K Y +H ++R V
Sbjct: 13 ILKGHEGA-VLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTY--KSHGREVRDVHVT 69
Query: 162 NDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSV 221
+D +F + ++ WD T + K+ H G ++ + + + ++ G DRS+
Sbjct: 70 SDNAKFCSCGGD--RQVYYWDVSTGRVIRKFRG-HDGEVNAVKFNDSSSVVVSAGFDRSL 126
Query: 222 RFW 224
R W
Sbjct: 127 RVW 129
Score = 109 (43.4 bits), Expect = 0.00075, P = 0.00075
Identities = 46/227 (20%), Positives = 97/227 (42%)
Query: 1 FFDFSKATAKRAFRVIQDTHNVRSVSFHPSGDFLL-AGTDHPIAHLYDVNTFQCYLSANV 59
++D S R FR D V +V F+ S ++ AG D + ++D + +
Sbjct: 86 YWDVSTGRVIRKFRG-HDGE-VNAVKFNDSSSVVVSAGFDRSL-RVWDCRSHSVE-PVQI 141
Query: 60 PEISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTK 119
+ ++ ++ V T + S DG +R +D + +G + +
Sbjct: 142 IDTFLDTVMSVVL---TKTEIIGGSVDGTVRTFDMRIGREMSDNLGQ----PVNCISISN 194
Query: 120 DQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIV 179
D VL+ DST++L + ++G L++ Y G + +++ V+ E +
Sbjct: 195 DGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSE-DGLVF 253
Query: 180 IWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWKE 226
WD + A+ ++K+ ++ + + + P E +T D ++R WK+
Sbjct: 254 FWDLVDAKVLSKFRAHDLVVTS-VSYHPKEDCMLTSSVDGTIRVWKK 299
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 147 (56.8 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 46/207 (22%), Positives = 86/207 (41%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVN---TFQCYLSANVPEISVNGAINQVRYSSTGG 78
V S +F P GDF+L+ + L+ CY N P + ++S G
Sbjct: 421 VYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYP-------VWDAQFSPFGH 473
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
+ + S D R+W +R + G H ++ + + ++ + D TV+LW+V
Sbjct: 474 YFASCSHDRTARIWSMDRIQPLRIMAG-H-LSDVDCVQWHPNCNYIATGSSDKTVRLWDV 531
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIG 198
+G V+ ++G H + + ++ S DE I++WD TA + ++
Sbjct: 532 QTGECVRIFIG--HRSMVLSLAMSPDGRYMASGDEDGT-IMMWDLSTARCITPLMGHNSC 588
Query: 199 APRWIEHSPAEAAFITCGT-DRSVRFW 224
W E + + G+ D +V+ W
Sbjct: 589 V--WSLSYSGEGSLLASGSADCTVKLW 613
Score = 133 (51.9 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 43/187 (22%), Positives = 82/187 (43%)
Query: 7 ATAKRAFRVIQDTHN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISV 64
+T A V HN V F P G + + + A ++ ++ Q L +S
Sbjct: 446 STKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQP-LRIMAGHLS- 503
Query: 65 NGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFV 124
++ V++ T S D +RLWD + CVR +G H + + A + D R++
Sbjct: 504 --DVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIG-HRSMVLSLA-MSPDGRYM 559
Query: 125 LSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDAL 184
S +D T+ +W++S+ R + +G H + ++ E +L+ + +WD
Sbjct: 560 ASGDEDGTIMMWDLSTARCITPLMG--HNSCVWSLSYSG-EGSLLASGSADCTVKLWDVT 616
Query: 185 TAEKVAK 191
++ K+ K
Sbjct: 617 SSTKLTK 623
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 147 (56.8 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 47/204 (23%), Positives = 97/204 (47%)
Query: 21 NVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMY 80
N+ +++ + +GD++ G+ + L V +Q S + + S A++ ++YSS G
Sbjct: 298 NIDTLTVNSTGDWIAIGSSK-LGQLL-VWEWQSE-SYVLKQQSHYDALSTLQYSSDGQRI 354
Query: 81 VTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSS 140
+T + DG I++WD S C+ + H T+ + F+K + S D +V+ W++
Sbjct: 355 ITGADDGKIKVWDMNSGFCIVTFT-QH-TSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIR 412
Query: 141 GRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAP 200
R + + + Q AV + + E V + + S EI +W T + + + + H G
Sbjct: 413 YRNFRTFTAPSRVQFSCIAV-DPSGEIVCAGSQDSFEIFMWSVQTGQ-LLETLAGHEGPV 470
Query: 201 RWIEHSPAEAAFITCGTDRSVRFW 224
+ + + + + D++VR W
Sbjct: 471 SSLSFNSSGSLLASGSWDKTVRIW 494
>CGD|CAL0000293 [details] [associations]
symbol:UTP13 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000293 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555
RefSeq:XP_720576.1 RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1
STRING:Q5AGB1 GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 119 (46.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 32/113 (28%), Positives = 54/113 (47%)
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
+ VT S D I++W + +C +++ G H + F ++ +LSCG D +KLW+
Sbjct: 534 LIVTGSGDKTIKVWSLLDFSCKKTLEG-HTNSVQRVKFFNREHPQLLSCGADGLIKLWDY 592
Query: 139 SSGRLVKQYLGATHTQLRFQAVF--NDTEEFVLSIDEPSNEIVIWDALTAEKV 189
G ++K H Q R A+ ND E F + + ++ W T E+V
Sbjct: 593 KQGEIIKSL--DNHDQ-RIWAMDLKNDGEYFTTA--DADGKLSFWTDNTEEEV 640
Score = 72 (30.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 22/90 (24%), Positives = 41/90 (45%)
Query: 10 KRAFRVIQDTHN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPE-ISVNG 66
+R ++D HN VR V F GD ++G + +Y+ F+ + + E I G
Sbjct: 179 RRCIHTLKD-HNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAG 237
Query: 67 AINQV---RYSSTGGMYVTASKDGAIRLWD 93
++ + +Y TGG + +++WD
Sbjct: 238 FVSLIDDRQYFYTGG------SENVLKIWD 261
>UNIPROTKB|Q5AGB1 [details] [associations]
symbol:CaO19.11744 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000293
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555 RefSeq:XP_720576.1
RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1 STRING:Q5AGB1
GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 119 (46.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 32/113 (28%), Positives = 54/113 (47%)
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
+ VT S D I++W + +C +++ G H + F ++ +LSCG D +KLW+
Sbjct: 534 LIVTGSGDKTIKVWSLLDFSCKKTLEG-HTNSVQRVKFFNREHPQLLSCGADGLIKLWDY 592
Query: 139 SSGRLVKQYLGATHTQLRFQAVF--NDTEEFVLSIDEPSNEIVIWDALTAEKV 189
G ++K H Q R A+ ND E F + + ++ W T E+V
Sbjct: 593 KQGEIIKSL--DNHDQ-RIWAMDLKNDGEYFTTA--DADGKLSFWTDNTEEEV 640
Score = 72 (30.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 22/90 (24%), Positives = 41/90 (45%)
Query: 10 KRAFRVIQDTHN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPE-ISVNG 66
+R ++D HN VR V F GD ++G + +Y+ F+ + + E I G
Sbjct: 179 RRCIHTLKD-HNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAG 237
Query: 67 AINQV---RYSSTGGMYVTASKDGAIRLWD 93
++ + +Y TGG + +++WD
Sbjct: 238 FVSLIDDRQYFYTGG------SENVLKIWD 261
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 145 (56.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 45/205 (21%), Positives = 88/205 (42%)
Query: 25 VSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGA--INQVRYSSTGGMYVT 82
V F G +L G + A ++DV Q + +G I V +S G T
Sbjct: 275 VRFSRDGKYLATGCNRS-AQIFDVTLGQNVAVLQDESVDKSGDLYIRSVCFSPDGKYLAT 333
Query: 83 ASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGR 142
++D IR+WD ++ ++ I H + S +F + R++ S D TV+LW+++ G+
Sbjct: 334 GAEDKQIRVWD-IATRTIKHIFSGH-EQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGK 391
Query: 143 LVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSS--NHIGAP 200
LV Y + + A+ D ++ + +WD T V + + H +
Sbjct: 392 LV--YTLSIEDGVTTVAMSPDG--LYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSV 447
Query: 201 RWIEHSPAEAAFITCGTDRSVRFWK 225
+ +P ++ D++++ W+
Sbjct: 448 YSVAFAPNGKELVSGSLDKTIKLWE 472
Score = 133 (51.9 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 56/237 (23%), Positives = 97/237 (40%)
Query: 2 FDFSKATAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPE 61
+D + T K F + ++ S+ F +G ++ +G+ L+D+ + V
Sbjct: 343 WDIATRTIKHIFSGHEQ--DIYSLDFAGNGRYIASGSGDKTVRLWDIAEGKL-----VYT 395
Query: 62 ISVNGAINQVRYSSTGGMYVTA-SKDGAIRLWDGVSANCVRSIVGAHGTAEAT-SANFTK 119
+S+ + V S G +YV A S D +R+WD + V + G ++ S F
Sbjct: 396 LSIEDGVTTVAMSPDG-LYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAP 454
Query: 120 DQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSID-EPSNEI 178
+ + ++S D T+KLWE++ R +QY A + F ++FVLS+ P
Sbjct: 455 NGKELVSGSLDKTIKLWELNLPR--QQYNSAGKGG-KCHRTFEGHKDFVLSVCLTPDGHW 511
Query: 179 VI----------WDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
V+ WD +T H + + SP F T D R W+
Sbjct: 512 VMSGSKDRGVQFWDPITGN-AQMMLQGHKNSVISVAPSPTGNLFATGSGDMRARIWR 567
Score = 114 (45.2 bits), Expect = 0.00056, P = 0.00056
Identities = 36/128 (28%), Positives = 63/128 (49%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDV--NTFQCYLSANVPEI-SVNGAINQVRYSSTGG 78
+RSV F P G +L G + ++D+ T + S + +I S++ A N RY ++G
Sbjct: 319 IRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNG-RYIASG- 376
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
S D +RLWD V ++ G T+ + D +V + D TV++W+
Sbjct: 377 -----SGDKTVRLWDIAEGKLVYTLSIEDGV---TTVAMSPDGLYVAAGSLDKTVRVWDT 428
Query: 139 SSGRLVKQ 146
++G LV++
Sbjct: 429 TTGYLVER 436
>ZFIN|ZDB-GENE-050417-160 [details] [associations]
symbol:wdr38 "WD repeat domain 38" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-050417-160
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
HOGENOM:HOG000091642 CTD:401551 HOVERGEN:HBG106736
OrthoDB:EOG4ZW5BD EMBL:BC093164 IPI:IPI00570124
RefSeq:NP_001017672.1 UniGene:Dr.91594 ProteinModelPortal:Q567I2
STRING:Q567I2 GeneID:550366 KEGG:dre:550366 InParanoid:Q567I2
NextBio:20879618 Uniprot:Q567I2
Length = 216
Score = 136 (52.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 43/177 (24%), Positives = 77/177 (43%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
V +F P LL D +L+ +T + L A+V G + +SS G ++
Sbjct: 25 VNCCAFSPDCQLLLTCCDAGKLYLWKTSTAK--LLASVS--GHTGPVKCCVFSSDGRLFA 80
Query: 82 TASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSG 141
+AS D ++R W S C ++ + E S F+ D +++LS G D+ +W + SG
Sbjct: 81 SASHDCSVRTWCNSSLKCTHTLTAHRRSVETVS--FSPDGQWLLSGGWDNRALIWSIQSG 138
Query: 142 RLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIG 198
L+++ G H +VF+ + V + + +W + A H+G
Sbjct: 139 ALLEELKG--HNAAVQSSVFSSDSQSVAT-GSWDRAVRVWKLRDRQAEAVVLQGHLG 192
>WB|WBGene00004312 [details] [associations]
symbol:rba-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0016246 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0006351
GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0001703 HOGENOM:HOG000160330 EMBL:Z81097
OMA:MPDVTKT PIR:T23385 RefSeq:NP_492551.1 ProteinModelPortal:P90917
SMR:P90917 STRING:P90917 PaxDb:P90917 EnsemblMetazoa:K07A1.11.1
EnsemblMetazoa:K07A1.11.2 GeneID:172801 KEGG:cel:CELE_K07A1.11
UCSC:K07A1.11 CTD:172801 WormBase:K07A1.11 InParanoid:P90917
NextBio:877059 Uniprot:P90917
Length = 412
Score = 143 (55.4 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 57/201 (28%), Positives = 83/201 (41%)
Query: 31 GDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGM--YVTAS--KD 86
G L AG D I H +D+N Q VP+ G + S + +V S D
Sbjct: 185 GHLLTAGDDGMICH-WDINANQTISGQIVPQSKFKGHSSNAEDVSFHALHNFVFGSVGDD 243
Query: 87 GAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGK-DSTVKLWEVSSGRLVK 145
+ LWD + + VG H TAE F ++L+ G D TV LW++ + R K
Sbjct: 244 RKLNLWDLRQSKPQLTAVG-H-TAEVNCITFNPFSEYILATGSVDKTVALWDMRNMRK-K 300
Query: 146 QYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIEH 205
Y H FQ F+ E VL+ + +++WD K+ SS+ + +
Sbjct: 301 MYTLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVWDI---SKIQDPSSSSAASS---DS 354
Query: 206 SPAEAAFITCG-TDRSVRF-W 224
P E FI G T + F W
Sbjct: 355 VPPEVIFIHAGHTGKVADFSW 375
>MGI|MGI:3052463 [details] [associations]
symbol:Fbxw10 "F-box and WD-40 domain protein 10"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00320 MGI:MGI:3052463 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL645847 EMBL:BC085108 IPI:IPI00553766
IPI:IPI00881833 UniGene:Mm.482259 ProteinModelPortal:Q5SUS0
SMR:Q5SUS0 PhosphoSite:Q5SUS0 PaxDb:Q5SUS0 PRIDE:Q5SUS0
Ensembl:ENSMUST00000036085 UCSC:uc007jke.2 UCSC:uc007jkf.2
GeneTree:ENSGT00700000104359 HOGENOM:HOG000082454
HOVERGEN:HBG058028 InParanoid:Q5SUS0 OMA:MEILSKC Bgee:Q5SUS0
Genevestigator:Q5SUS0 Uniprot:Q5SUS0
Length = 1030
Score = 147 (56.8 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 56/217 (25%), Positives = 99/217 (45%)
Query: 14 RVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVR- 72
RV+ DT + + + GD + ++ I HL D+ Q + +P I G VR
Sbjct: 421 RVLSDTFDQNRIIHYNGGDLMAISSNRKI-HLLDI--MQ---TKELP-IEFRGHAGSVRA 473
Query: 73 --YSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKD 130
S + ++ S D +IR WD + CVR G GT T + K++ ++S KD
Sbjct: 474 LFLSEEDNILLSGSYDLSIRYWDVKTGACVRIFYGHQGTI--TCLDVYKNR--LVSGAKD 529
Query: 131 STVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVA 190
VK W++ +G+ +K + H A ++T +++S E + +W +TA+ +
Sbjct: 530 GQVKEWDIETGKCLKTF---KHKDPILAAKISET--YIVSSCE-RGIVKVWHVVTAQ-LQ 582
Query: 191 KWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWKEI 227
K + H GA + + + E ++ G D V W +
Sbjct: 583 KTLTGHEGAVKCLFFN--EWHLVSGGADGLVMAWSMV 617
>UNIPROTKB|B3MC74 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7217 "Drosophila ananassae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH902619 OrthoDB:EOG45DV4X RefSeq:XP_001959352.1
ProteinModelPortal:B3MC74 STRING:B3MC74 EnsemblMetazoa:FBtr0116785
GeneID:6494943 KEGG:dan:Dana_GF12085 FlyBase:FBgn0089124
InParanoid:B3MC74 Uniprot:B3MC74
Length = 335
Score = 140 (54.3 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 52/209 (24%), Positives = 95/209 (45%)
Query: 25 VSFHPSGD-FLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTA 83
V++HP G+ F G D I ++ +N + + + I ++R+S G +A
Sbjct: 20 VAWHPKGNVFASCGEDKAI-RIWSLNG-NTWTTKTILSDGHKRTIREIRWSPCGQYLASA 77
Query: 84 SKDGAIRLWDGVSAN--CVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSG 141
S DG +W S C ++ G H E S ++++ + +C +D +V +WEV+
Sbjct: 78 SFDGTTAIWSKSSGEFECNATLEG-HEN-EVKSVSWSRSGGLLATCSRDKSVWIWEVAGD 135
Query: 142 RLVK-QYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW--DALTAEK--VAKWSSNH 196
+ + HTQ + V++ T+E + S N I ++ DAL ++ VA SS H
Sbjct: 136 DEFECAAVLNPHTQDVKRVVWHPTKELLASASY-DNTIKMFAEDALDSDWDCVATLSS-H 193
Query: 197 IGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
I+ ++C D S++ W+
Sbjct: 194 TSTVWSIDFDATGERLVSCSDDTSLKIWQ 222
>SGD|S000002772 [details] [associations]
symbol:CDC40 "Pre-mRNA splicing factor" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA]
[GO:0000389 "mRNA 3'-splice site recognition" evidence=IGI]
[GO:0000348 "mRNA branch site recognition" evidence=IGI]
[GO:0005681 "spliceosomal complex" evidence=IEA;IDA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IGI;IMP] [GO:0000386 "second spliceosomal
transesterification activity" evidence=IGI;IMP] [GO:0051301 "cell
division" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000002772 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0000082
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938
GO:GO:0005681 EMBL:U28373 RefSeq:NP_010652.3 GeneID:851968
KEGG:sce:YDR364C KO:K12816 GO:GO:0000350 GO:GO:0000389
GO:GO:0000348 HOGENOM:HOG000214672 GeneTree:ENSGT00530000063583
OrthoDB:EOG4CG3J4 EMBL:U17018 PIR:S61159 RefSeq:NP_010654.3
ProteinModelPortal:P40968 SMR:P40968 DIP:DIP-1111N IntAct:P40968
MINT:MINT-617580 STRING:P40968 PaxDb:P40968 EnsemblFungi:YDR364C
GeneID:851972 KEGG:sce:YDR366C CYGD:YDR364c OMA:KGDGPWG
NextBio:970088 Genevestigator:P40968 GermOnline:YDR364C
Uniprot:P40968
Length = 455
Score = 142 (55.0 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 43/183 (23%), Positives = 89/183 (48%)
Query: 50 TFQCYLSANVPEISVNG---AINQVRY-SSTGGMYVTASKDGAIRLWDGV-SANCVRSIV 104
+F+CYL V + G +++ TG + ++ D I++WD C+R
Sbjct: 145 SFRCYLPKKVIR-NYPGHPEGTTALKFLPKTGHLILSGGNDHTIKIWDFYHDYECLRDFQ 203
Query: 105 GAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDT 164
G + +A FT+D + LS D +VK+W+ +G+ VK L T ++ +
Sbjct: 204 GHNKPIKAL--RFTEDCQSFLSSSFDRSVKIWDTETGK-VKTRLHLNSTPADVESRPTNP 260
Query: 165 EEFVLSIDEPSNEIVIWDALTAEK--VAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVR 222
EF++ + +++I+ +D +E + + +H+ + +++ P + FI+ D++VR
Sbjct: 261 HEFIVGLS--NSKILHYDDRVSENQGLVQTYDHHLSSILALKYFPDGSKFISSSEDKTVR 318
Query: 223 FWK 225
W+
Sbjct: 319 IWE 321
>FB|FBgn0038617 [details] [associations]
symbol:CG12333 species:7227 "Drosophila melanogaster"
[GO:0046331 "lateral inhibition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046331 HSSP:P16649
GeneTree:ENSGT00640000091456 OMA:TGLPRDM EMBL:AY094717
RefSeq:NP_650723.1 UniGene:Dm.12926 SMR:Q9VE73 IntAct:Q9VE73
MINT:MINT-1593181 EnsemblMetazoa:FBtr0083655 GeneID:42218
KEGG:dme:Dmel_CG12333 UCSC:CG12333-RA FlyBase:FBgn0038617
InParanoid:Q9VE73 OrthoDB:EOG434TNF GenomeRNAi:42218 NextBio:827735
Uniprot:Q9VE73
Length = 487
Score = 142 (55.0 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 56/206 (27%), Positives = 90/206 (43%)
Query: 30 SGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTASKDGAI 89
S D ++ G+ A L+DV T L P + + V T + VTAS+D
Sbjct: 289 SMDQIITGSWDRTAILWDVETG---LPLQ-PLTGHDHELTHVSAHPTQRLVVTASRDTTF 344
Query: 90 RLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLG 149
RLWD A S+ H T TS+ F +D + V+S D T+K+WE+ R ++ L
Sbjct: 345 RLWDFREAIPAVSVFQGH-TETVTSSVFARDDK-VVSGSDDRTIKVWEL---RNMRSALA 399
Query: 150 ATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWS----SNH---IGAPRW 202
T + T +++I + +I ++D L ++VA+ H + + W
Sbjct: 400 TIRTDSSVNRLAVSTGG-IIAIPHDNRQIRLFD-LNGQRVARLPRTSRQGHRRMVSSVAW 457
Query: 203 IEHSPAEAAFITCGTDRSVRFWKEIL 228
E + +CG DR V W +L
Sbjct: 458 AEEPLLDCDLFSCGFDRRVFGWSIVL 483
>DICTYBASE|DDB_G0291231 [details] [associations]
symbol:mhkA "myosin heavy chain kinase A"
species:44689 "Dictyostelium discoideum" [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0006468 "protein phosphorylation"
evidence=IEA;IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0004672 "protein kinase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0051764 "actin crosslink
formation" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] [GO:0051017 "actin filament bundle assembly"
evidence=IDA] [GO:0051015 "actin filament binding" evidence=IDA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0031037 "myosin II filament disassembly"
evidence=IDA;IMP] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0045159 "myosin II binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA;IC] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA;IDA] [GO:0016905 "myosin heavy chain
kinase activity" evidence=IEA;IDA] [GO:0046777 "protein
autophosphorylation" evidence=IDA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004166
InterPro:IPR011009 InterPro:IPR015943 Pfam:PF00400 Pfam:PF02816
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS51158 SMART:SM00320
SMART:SM00811 dictyBase:DDB_G0291231 GO:GO:0005524 GO:GO:0005938
EMBL:AAFI02000177 GenomeReviews:CM000155_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0051015 GO:GO:0046777 GO:GO:0016887 GO:GO:0051017
GO:GO:0000910 GO:GO:0051764 GO:GO:0018107 BRENDA:2.7.11.7
GO:GO:0031037 EMBL:U16856 PIR:A55532 RefSeq:XP_635119.1 PDB:3LKM
PDB:3LLA PDB:3LMH PDB:3LMI PDB:3PDT PDBsum:3LKM PDBsum:3LLA
PDBsum:3LMH PDBsum:3LMI PDBsum:3PDT ProteinModelPortal:P42527
EnsemblProtists:DDB0216274 GeneID:8628066 KEGG:ddi:DDB_G0291231
OMA:NEQVERV ProtClustDB:CLSZ2429540 EvolutionaryTrace:P42527
GO:GO:0016905 Uniprot:P42527
Length = 1146
Score = 146 (56.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 56/228 (24%), Positives = 95/228 (41%)
Query: 3 DFSKATAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVN-TFQCYLSANVPE 61
+FSK K + V S++F + L AG ++DVN ++C +
Sbjct: 853 EFSKKDLKCVSTIQSFRERVNSIAFFDNQKLLCAGYGDGTYRVFDVNDNWKCLYT----- 907
Query: 62 ISVNGAINQVRYSSTGGMYV-TASKDGAIRLWDGVSAN--CVRSIVGAHGTAEATSANFT 118
VNG + + Y+ T+S D I++ S N C+ ++VG G AN
Sbjct: 908 --VNGHRKSIESIACNSNYIFTSSPDNTIKVHIIRSGNTKCIETLVGHTGEVNCVVAN-- 963
Query: 119 KDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEI 178
++++ SC D T+K+W++S+ + +K + G HT+ + F D+ I
Sbjct: 964 --EKYLFSCSYDKTIKVWDLSTFKEIKSFEGV-HTKYIKTLALSGRYLFSGGNDQI---I 1017
Query: 179 VIWDALTAEKVAKWSSNHIGAPRWIE--HSPAEAAFITCGTDRSVRFW 224
+WD T + N G W+ H A F T D ++ W
Sbjct: 1018 YVWDTETLSMLF----NMQGHEDWVLSLHCTASYLFST-SKDNVIKIW 1060
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 139 (54.0 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 41/159 (25%), Positives = 72/159 (45%)
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLS 126
AIN V SS G ++ S D ++RLWD +RS +G H T++ S +F+ D R ++S
Sbjct: 74 AINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIG-H-TSDVFSVSFSPDNRQIVS 131
Query: 127 CGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIV-IWDALT 185
+D T+KLW + + HT F+ + + + +++V +W+
Sbjct: 132 ASRDKTIKLWNTLA-QCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKN 190
Query: 186 AEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+ + K H G + SP + + G D + W
Sbjct: 191 CD-LNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLW 228
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 139 (54.0 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 41/159 (25%), Positives = 72/159 (45%)
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLS 126
AIN V SS G ++ S D ++RLWD +RS +G H T++ S +F+ D R ++S
Sbjct: 74 AINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIG-H-TSDVFSVSFSPDNRQIVS 131
Query: 127 CGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIV-IWDALT 185
+D T+KLW + + HT F+ + + + +++V +W+
Sbjct: 132 ASRDKTIKLWNTLA-QCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKN 190
Query: 186 AEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+ + K H G + SP + + G D + W
Sbjct: 191 CD-LNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLW 228
>FB|FBgn0033557 [details] [associations]
symbol:CG12325 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0022008
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 KO:K14558 OMA:VWQCDTP
InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 EMBL:BT016114 RefSeq:NP_610618.1 UniGene:Dm.12871
SMR:Q5U0X8 STRING:Q5U0X8 EnsemblMetazoa:FBtr0088227 GeneID:36144
KEGG:dme:Dmel_CG12325 UCSC:CG12325-RA FlyBase:FBgn0033557
InParanoid:Q5U0X8 OrthoDB:EOG4SN03M GenomeRNAi:36144 NextBio:797070
Uniprot:Q5U0X8
Length = 949
Score = 145 (56.1 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 40/156 (25%), Positives = 78/156 (50%)
Query: 71 VRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKD 130
+ YSS G T +D ++LW+ S+ C + + T+ T F+++++F++S D
Sbjct: 399 IAYSSDGQFIATGGEDSKVKLWNTQSSFCF--VTFSEHTSGVTGIQFSRNKKFLVSSSLD 456
Query: 131 STVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVA 190
TV+ ++V+ R + + Q AV + + E V++ + +I +W T K+
Sbjct: 457 GTVRAFDVNRYRNFRTFTSPNPAQFSCVAV-DYSGELVVAGGQDVFDIFLWSVKTG-KLL 514
Query: 191 KWSSNHIGAPRWIEHSP-AEAAFITCGT-DRSVRFW 224
+ S H G I SP A ++ + G+ D++V+ W
Sbjct: 515 EIISGHEGPVVSIAFSPVATSSTLVSGSWDKTVKIW 550
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 142 (55.0 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 37/145 (25%), Positives = 62/145 (42%)
Query: 80 YVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVS 139
+VT S D I++WD S S+ G T + ++ SCG+D VK W++
Sbjct: 221 FVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSP--YLFSCGEDKQVKCWDLE 278
Query: 140 SGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGA 199
++++ Y G H + + T + +++ S IWD T V S H A
Sbjct: 279 YNKVIRHYHG--HLSAVYGLDLHPTIDVLVTCSRDSTAR-IWDVRTKASVHTLSG-HTNA 334
Query: 200 PRWIEHSPAEAAFITCGTDRSVRFW 224
++ AE +T D ++R W
Sbjct: 335 VATVKCQAAEPQVVTGSHDTTIRLW 359
>POMBASE|SPBC1718.01 [details] [associations]
symbol:pop1 "cullin 1 adaptor protein Pop1" species:4896
"Schizosaccharomyces pombe" [GO:0000747 "conjugation with cellular
fusion" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IGI] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008054 "cyclin catabolic process"
evidence=IMP] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPBC1718.01 GO:GO:0005634 GO:GO:0007346 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0008054 GO:GO:0006995 GO:GO:0000747 KO:K03361
OrthoDB:EOG4B2X5M EMBL:Y08391 PIR:T45136 PIR:T50329
RefSeq:XP_001713146.1 ProteinModelPortal:P87060 IntAct:P87060
STRING:P87060 EnsemblFungi:SPBC1718.01.1 GeneID:2540511
KEGG:spo:SPBC1718.01 OMA:NRCISAS NextBio:20801638 Uniprot:P87060
Length = 775
Score = 144 (55.7 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 40/165 (24%), Positives = 77/165 (46%)
Query: 63 SVNGAINQVR-YSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
++ G + VR + G + V+AS DG +R+W + C+ + G G + + N ++ Q
Sbjct: 572 TLRGHTDSVREVACLGDLIVSASYDGTLRVWKASTGVCLHVLRGHVGRVYSVTINPSRQQ 631
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
+S G D+ +++W + SG L++ G H+ L Q FN V + P + +W
Sbjct: 632 --CISAGTDAKIRIWNLESGELLQTLHG--HSNLVSQVTFNQNI-LVSASAPPDTSLRVW 686
Query: 182 DALTAE--KVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
D T + K HI + +H ++ + G+ +++ W
Sbjct: 687 DLNTGSCRDILKCPLGHI----FFQHDESK---VVSGSHSTLQLW 724
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 142 (55.0 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 37/160 (23%), Positives = 67/160 (41%)
Query: 66 GAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVL 125
G + + +VT S D I++WD S S+ G T + + ++
Sbjct: 209 GWVRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVAVS--NRSPYLF 266
Query: 126 SCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALT 185
SCG+D VK W++ ++++ Y G H + + T + +++ + V WD T
Sbjct: 267 SCGEDKQVKCWDLEYNKVIRHYHG--HLSAVYDLDLHPTIDVLVTCSRDATARV-WDIRT 323
Query: 186 AEKVAKWSSNHIGAPRWIEHSPAEAAFITCGT-DRSVRFW 224
V S H ++ AE +T G+ D ++R W
Sbjct: 324 KANVHTLSG-HTNTVATVKCQSAEPQVVTVGSHDTTIRLW 362
>UNIPROTKB|G4MYQ9 [details] [associations]
symbol:MGG_08133 "Pre-mRNA-processing factor 17"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001232 KO:K12816 RefSeq:XP_003715095.1
ProteinModelPortal:G4MYQ9 EnsemblFungi:MGG_08133T0 GeneID:2678328
KEGG:mgr:MGG_08133 Uniprot:G4MYQ9
Length = 542
Score = 142 (55.0 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 38/155 (24%), Positives = 72/155 (46%)
Query: 73 YSSTGGMYVTASKDGAIRLWDGV-SANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDS 131
+ ++G + ++ S D +++WD +R+ G + T+ N T +F LS D
Sbjct: 259 FPNSGHLLLSGSADSTVKIWDVYHQRELLRTYSGHSKSLSDTTFN-THGDKF-LSASFDR 316
Query: 132 TVKLWEVSSGRLVKQYL-GATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVA 190
+KLW+ +G+ + ++ G T +RF EFV + + N+IV +D +
Sbjct: 317 MMKLWDTETGKCIAKFTTGKTPHVVRFNPTSELGHEFVAGMSD--NKIVQFDTRAGNETV 374
Query: 191 KWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
+ +H+G I F+T DR++R W+
Sbjct: 375 QEYDHHLGPVNTITFCDDGRRFMTTSDDRTLRAWE 409
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 138 (53.6 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 44/181 (24%), Positives = 86/181 (47%)
Query: 4 FSKATAKRAFRVIQDTHN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPE 61
F T K+ + + DT + S+++ P G +L +G I +++D+ T + +
Sbjct: 133 FGVETGKKEYSL--DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 190
Query: 62 ISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
+ I + +S + VTAS DG I++++ A+ ++ G HG+ A F+ D
Sbjct: 191 MP----IRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSG-HGSWVLNVA-FSPDD 244
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
+S D +VK+W+VS+ V +L H + +N ++S+ + EI ++
Sbjct: 245 THFVSSSSDKSVKVWDVSARTCVHTFLD--HQDQVWGVKYNKNGSKIVSVAD-DQEIHVY 301
Query: 182 D 182
D
Sbjct: 302 D 302
>TAIR|locus:2035179 [details] [associations]
symbol:AT1G52730 "AT1G52730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 HSSP:P16649 EMBL:AC008016
HOGENOM:HOG000174258 KO:K13137 ProtClustDB:CLSN2687815
EMBL:BT008315 EMBL:AK227970 EMBL:AK317364 IPI:IPI00547978
RefSeq:NP_175682.2 RefSeq:NP_849800.1 UniGene:At.28102
UniGene:At.67869 ProteinModelPortal:Q9SSS7 SMR:Q9SSS7 IntAct:Q9SSS7
STRING:Q9SSS7 PaxDb:Q9SSS7 PRIDE:Q9SSS7 DNASU:841706
EnsemblPlants:AT1G52730.1 EnsemblPlants:AT1G52730.2 GeneID:841706
KEGG:ath:AT1G52730 TAIR:At1g52730 InParanoid:Q9SSS7 OMA:EDMWVRV
PhylomeDB:Q9SSS7 Genevestigator:Q9SSS7 Uniprot:Q9SSS7
Length = 343
Score = 139 (54.0 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 49/209 (23%), Positives = 94/209 (44%)
Query: 20 HNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVN-GAINQVRYSSTGG 78
H VR+ +F LL G I ++D+N L A E+ + G+I + + +
Sbjct: 103 HIVRACAFSEDTKSLLTGGFEKILRVFDMNR----LDAPPTEVDKSPGSIRTLTWLHSDQ 158
Query: 79 MYVTASKD-GAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWE 137
+++ D G +RLWD S V+++ + TSA ++D R++ + STVK W+
Sbjct: 159 TILSSCTDIGGVRLWDVRSGKIVQTL---ETKSPVTSAEVSQDGRYITTAD-GSTVKFWD 214
Query: 138 VSSGRLVKQY-LGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNH 196
+ LVK Y + + E+FV ++ + ++D T E++ + H
Sbjct: 215 ANHFGLVKSYDMPCNIESASLEP--KSGEKFVAGGEDMW--VRVFDFYTGEEIG-CNKGH 269
Query: 197 IGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
G + +P ++ + D ++R W+
Sbjct: 270 HGPVHCVRFTPTGLSYASGSEDGTIRIWQ 298
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 143 (55.4 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 46/206 (22%), Positives = 93/206 (45%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T V + F+ S + ++AG+ L+D+ + + + +I+ + + G
Sbjct: 63 TSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTL----MGHKASISSLDFHPMGE 118
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
+ S D I+LWD CV G H A A F+ D +++ S DSTVKLW++
Sbjct: 119 YLASGSVDSNIKLWDVRRKGCVFRYKG-HTQAVRCLA-FSPDGKWLASASDDSTVKLWDL 176
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIG 198
+G+++ ++ +HT F+ E ++L+ + +WD + S G
Sbjct: 177 IAGKMITEF--TSHTSAVNVVQFHPNE-YLLASGSADRTVKLWDLEKFNMIGS-SEGETG 232
Query: 199 APRWIEHSPAEAAFITCGTDRSVRFW 224
R + +P + + + G++ ++R +
Sbjct: 233 VVRSVLFNP-DGSCLYSGSENTLRVY 257
Score = 125 (49.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 34/150 (22%), Positives = 66/150 (44%)
Query: 75 STGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVK 134
S+G + T +D + +W NC+ S+ G H T+ F + V++ +++
Sbjct: 31 SSGRLLATGGEDCRVNIWAVSKPNCIMSLTG-H-TSAVGCIQFNSSEERVVAGSLSGSLR 88
Query: 135 LWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSS 194
LW++ + ++++ +G H F+ E++ S SN I +WD V ++
Sbjct: 89 LWDLEAAKILRTLMG--HKASISSLDFHPMGEYLASGSVDSN-IKLWDVRRKGCVFRYKG 145
Query: 195 NHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
H A R + SP + D +V+ W
Sbjct: 146 -HTQAVRCLAFSPDGKWLASASDDSTVKLW 174
>FB|FBgn0038927 [details] [associations]
symbol:CG6015 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 KO:K12816 GeneTree:ENSGT00530000063583 EMBL:AY069490
RefSeq:NP_651005.1 UniGene:Dm.20226 SMR:Q9VD52 IntAct:Q9VD52
STRING:Q9VD52 EnsemblMetazoa:FBtr0084183 GeneID:42593
KEGG:dme:Dmel_CG6015 UCSC:CG6015-RA FlyBase:FBgn0038927
InParanoid:Q9VD52 OMA:PEDIEGF OrthoDB:EOG493202 GenomeRNAi:42593
NextBio:829587 Uniprot:Q9VD52
Length = 576
Score = 142 (55.0 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 43/180 (23%), Positives = 85/180 (47%)
Query: 52 QCYL-SANVPEISV-NGAINQVR-YSSTGGMYVTASKDGAIRLWDGVSAN-CVRSIVGAH 107
+C+L A++ S N I+ +R + T + ++ S D ++LW+ C+R+ G H
Sbjct: 270 KCFLPKAHIHTWSGHNKGISSIRWFPKTAHLLLSGSMDCRVKLWEVYGERRCIRTFSG-H 328
Query: 108 GTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFN--DTE 165
A A + F LS D +KLW+ +G +V ++ T ++ F F+ +++
Sbjct: 329 RQAIKDIAWNNRGTNF-LSASYDRYIKLWDAETGDVVSRF---TTRKMPFCVKFHPDNSK 384
Query: 166 EFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
+ + +I+ WD + + V ++ H+G+ I F+T D+S+R W+
Sbjct: 385 QHLFVAGTSDKKIICWDTRSGDIVQEYD-RHLGSVSTITFVDDNRRFVTTSDDKSMRIWE 443
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 142 (55.0 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 32/115 (27%), Positives = 53/115 (46%)
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
++ V++ T S D +RLW N VR G G S +F+ + +++ S
Sbjct: 429 VDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPV--LSLSFSPNGKYLASA 486
Query: 128 GKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWD 182
G+D +KLW+++SG L K+ G HT F+ + S N + +WD
Sbjct: 487 GEDQRLKLWDLASGTLFKELRG--HTDSITSLAFSPDSGLIASASM-DNSVRVWD 538
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 31/123 (25%), Positives = 58/123 (47%)
Query: 21 NVRSVSFHPSGDFLLAGTDHPIAHLYDV---NTFQCYLSANVPEISVNGAINQVRYSSTG 77
+V V FHP+ ++L G+ L+ N+ + + P +S++ +S G
Sbjct: 428 DVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLS-------FSPNG 480
Query: 78 GMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWE 137
+A +D ++LWD S + + G H T TS F+ D + S D++V++W+
Sbjct: 481 KYLASAGEDQRLKLWDLASGTLFKELRG-H-TDSITSLAFSPDSGLIASASMDNSVRVWD 538
Query: 138 VSS 140
+ S
Sbjct: 539 IRS 541
>TAIR|locus:2089303 [details] [associations]
symbol:AT3G16650 "AT3G16650" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB022217 GO:GO:0080008 HOGENOM:HOG000207595
ProtClustDB:CLSN2685622 EMBL:X82826 EMBL:AY054181 EMBL:BT020378
IPI:IPI00521576 RefSeq:NP_566557.1 UniGene:At.104
ProteinModelPortal:Q39190 SMR:Q39190 IntAct:Q39190 STRING:Q39190
EnsemblPlants:AT3G16650.1 GeneID:820917 KEGG:ath:AT3G16650
GeneFarm:2851 TAIR:At3g16650 InParanoid:Q39190 OMA:HKKTVRA
PhylomeDB:Q39190 Genevestigator:Q39190 GermOnline:AT3G16650
Uniprot:Q39190
Length = 479
Score = 140 (54.3 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 56/216 (25%), Positives = 93/216 (43%)
Query: 13 FRVIQDTHN-VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQV 71
+RV+Q VRSV+F PS ++ G+ ++DV T V ++++ G I QV
Sbjct: 163 YRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVAT-------GVLKLTLTGHIGQV 215
Query: 72 RYSSTGGMYV---TASKDGAIRLWDGVSANCVRSIVG-AHGTAEATSANFTKDQRFVLSC 127
R + + +A D ++ WD +RS G HG + + T D VL+
Sbjct: 216 RGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVY-CLALHPTLD--VVLTG 272
Query: 128 GKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE 187
G+DS ++W++ R Q H F + T+ V++ S I WD +
Sbjct: 273 GRDSVCRVWDI---RTKMQIFVLPHDSDVFSVLARPTDPQVITGSHDST-IKFWDLRYGK 328
Query: 188 KVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRF 223
+A +NH R + P E F++ D +F
Sbjct: 329 SMAT-ITNHKKTVRAMALHPKENDFVSASADNIKKF 363
Score = 115 (45.5 bits), Expect = 0.00034, P = 0.00033
Identities = 34/159 (21%), Positives = 66/159 (41%)
Query: 66 GAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVL 125
G + V + + + T S D I++WD V+ ++ + H + + ++
Sbjct: 171 GWVRSVAFDPSNEWFCTGSADRTIKIWD-VATGVLKLTLTGH-IGQVRGLAVSNRHTYMF 228
Query: 126 SCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALT 185
S G D VK W++ ++++ Y G H + + T + VL+ S +WD T
Sbjct: 229 SAGDDKQVKCWDLEQNKVIRSYHGHLHGV--YCLALHPTLDVVLTGGRDS-VCRVWDIRT 285
Query: 186 AEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
K+ + H + P + IT D +++FW
Sbjct: 286 --KMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFW 322
>WB|WBGene00020423 [details] [associations]
symbol:prp-19 species:6239 "Caenorhabditis elegans"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0005654
GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0040011 GO:GO:0005681 GO:GO:0040035 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0040002 GO:GO:0000151
GeneTree:ENSGT00700000104487 InterPro:IPR013915 Pfam:PF08606
HOGENOM:HOG000177308 OMA:QWQELKV EMBL:FO081619 PIR:T16846
ProteinModelPortal:Q10051 SMR:Q10051 DIP:DIP-26296N IntAct:Q10051
MINT:MINT-214042 STRING:Q10051 PaxDb:Q10051
EnsemblMetazoa:T10F2.4.1 EnsemblMetazoa:T10F2.4.2 UCSC:T10F2.4.1
WormBase:T10F2.4 InParanoid:Q10051 NextBio:889292 Uniprot:Q10051
Length = 492
Score = 140 (54.3 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 45/211 (21%), Positives = 94/211 (44%)
Query: 14 RVIQDTHN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQV 71
+ I D H V +S + SGD++L+ +D D+ + + +V E A++ +
Sbjct: 286 KAIIDVHQAPVTDISLNASGDYILSASDDSYWAFSDIRSGKSLCKVSV-EPGSQIAVHSI 344
Query: 72 RYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDS 131
+ G ++ T + D +++WD + V + H TA S F+++ ++ + +D
Sbjct: 345 EFHPDGLIFGTGAADAVVKIWD-LKNQTVAAAFPGH-TAAVRSIAFSENGYYLATGSEDG 402
Query: 132 TVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAK 191
VKLW++ + +K + + + F+ T F L I ++ + + +V
Sbjct: 403 EVKLWDLRKLKNLKTFANEEKQPINSLS-FDMTGTF-LGIG--GQKVQVLHVKSWSEVVS 458
Query: 192 WSSNHIGAPRWIEHSPAEAAFITCGTDRSVR 222
S +H G + + +TC D+S+R
Sbjct: 459 LS-DHSGPVTGVRFGENARSLVTCSLDKSLR 488
>UNIPROTKB|J9JHP3 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000044849 Uniprot:J9JHP3
Length = 1215
Score = 144 (55.7 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 41/156 (26%), Positives = 71/156 (45%)
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
+ TAS D ++LWD C ++ G H T F+ D + + SC D T+KLW+V
Sbjct: 723 LLATASSDCFLKLWDLNQKECRNTMFG-H-TNSVNHCRFSPDDKLLASCSADGTLKLWDV 780
Query: 139 SSGRL-----VKQY-LGATHTQLRFQAVFND---TEEFVLSIDEPSNEIVIWDALTAEKV 189
S VKQ+ L + Q + + + + + N+I +W+ + KV
Sbjct: 781 KSANERKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRIMVAAKNKIFLWNMDSCLKV 840
Query: 190 AKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
A H+ + SP ++F+T D+++R W+
Sbjct: 841 AD-CRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWE 875
>ASPGD|ASPL0000009210 [details] [associations]
symbol:AN4226 species:162425 "Emericella nidulans"
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003676 EMBL:BN001302 GO:GO:0030529
OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158
ProteinModelPortal:C8V4A4 EnsemblFungi:CADANIAT00004434
Uniprot:C8V4A4
Length = 447
Score = 139 (54.0 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 39/119 (32%), Positives = 62/119 (52%)
Query: 24 SVSFHP--SGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
+VS++P + +F +A DH + +++D+ L NV + V A+ V +S TG V
Sbjct: 244 AVSWNPMEAFNFAVANEDHNV-YMFDMRKMNRAL--NVLKDHV-AAVMDVDFSPTGEELV 299
Query: 82 TASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSS 140
TAS D IRLW+ + + R I SA FT D ++VLS D ++LW ++
Sbjct: 300 TASYDRTIRLWNRATGHS-RDIYHTQRMQRVFSAKFTPDNKYVLSGSDDGNIRLWRANA 357
>POMBASE|SPBPJ4664.04 [details] [associations]
symbol:SPBPJ4664.04 "coatomer alpha subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=ISO] [GO:0030126 "COPI vesicle coat" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBPJ4664.04 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 OMA:PLAADHI InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:NP_595279.1 ProteinModelPortal:Q96WV5
STRING:Q96WV5 EnsemblFungi:SPBPJ4664.04.1 GeneID:2541412
KEGG:spo:SPBPJ4664.04 OrthoDB:EOG40VZXP NextBio:20802518
Uniprot:Q96WV5
Length = 1207
Score = 126 (49.4 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 47/180 (26%), Positives = 81/180 (45%)
Query: 18 DTHN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSS 75
D H+ VR ++FHP+ ++G D Y VN + Y S + S+ G ++ VR +
Sbjct: 50 DGHDGPVRGIAFHPTQPLFVSGGDD-----YKVNVWN-YKSRKLL-FSLCGHMDYVRVCT 102
Query: 76 TGGMY---VTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDST 132
Y ++ S D IR+W+ S NC+ + G H +A F + ++S D T
Sbjct: 103 FHHEYPWILSCSDDQTIRIWNWQSRNCIAILTG-HSHYVMCAA-FHPSEDLIVSASLDQT 160
Query: 133 VKLWEVSSGRL---------VKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDA 183
V++W++S R+ ++ L H + +F T+ V + E + V W A
Sbjct: 161 VRVWDISGLRMKNAAPVSMSLEDQLAQAHNSIS-NDLFGSTDAIVKFVLEGHDRGVNWCA 219
Score = 109 (43.4 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 32/162 (19%), Positives = 70/162 (43%)
Query: 23 RSVSFHPSGDFLLAGTDHPIAHLYD--VNTFQCYLSANVPEISVNGAINQVRYSSTGGMY 80
+ V+FHP+ ++L + L+D + T + +G + + + T ++
Sbjct: 15 KGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGH------DGPVRGIAFHPTQPLF 68
Query: 81 VTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSS 140
V+ D + +W+ S + S+ G + F + ++LSC D T+++W S
Sbjct: 69 VSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCT--FHHEYPWILSCSDDQTIRIWNWQS 126
Query: 141 GRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWD 182
+ G +H + A F+ +E+ ++S + +WD
Sbjct: 127 RNCIAILTGHSHYVMC--AAFHPSEDLIVSASLDQT-VRVWD 165
Score = 62 (26.9 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 178 IVIWDALTAEKVAKWSSNHIGA----PRWIEHSPAE-AAFITCGTDRSV 221
IV +D L A+ S H+G+ PR + ++PAE A +T D V
Sbjct: 349 IVSYDLLRAQSTTVASVKHLGSAWLPPRSLSYNPAEKVALLTSSADNGV 397
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 136 (52.9 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 40/161 (24%), Positives = 75/161 (46%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
+ S+++ P G +L +G I +++D+ T + + + I + +S + V
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMP----IRSLTFSPDSQLLV 206
Query: 82 TASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSG 141
TAS DG I+++D AN ++ G HG+ S F+ D +S D ++K+W+ SS
Sbjct: 207 TASDDGYIKIYDVQHANLAGTLSG-HGSW-VLSVAFSPDDTHFVSSSSDKSIKVWDTSSR 264
Query: 142 RLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWD 182
V + H + +N T ++S + I I+D
Sbjct: 265 SCVNTFFD--HQDQVWSVKYNPTGSKIVSAGD-DRAIHIYD 302
Score = 128 (50.1 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 44/204 (21%), Positives = 84/204 (41%)
Query: 24 SVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGA-INQVRYSSTGGMYVT 82
+V+F P ++ G+ HL VN F + G I + YS G +
Sbjct: 111 TVAFSPDSKYIATGS-----HLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLAS 165
Query: 83 ASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGR 142
+ DG I ++D + + ++ G H S F+ D + +++ D +K+++V
Sbjct: 166 GAIDGIINIFDIATGKLLHTLEG-HAMP-IRSLTFSPDSQLLVTASDDGYIKIYDVQHAN 223
Query: 143 LVKQYLGATHTQLRFQAVFN-DTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPR 201
L G H F+ D FV S + S I +WD + V + +
Sbjct: 224 LAGTLSG--HGSWVLSVAFSPDDTHFVSSSSDKS--IKVWDTSSRSCVNTFFDHQDQV-- 277
Query: 202 W-IEHSPAEAAFITCGTDRSVRFW 224
W ++++P + ++ G DR++ +
Sbjct: 278 WSVKYNPTGSKIVSAGDDRAIHIY 301
>UNIPROTKB|D6RFX4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0008200 "ion channel
inhibitor activity" evidence=IEA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0090003
"regulation of establishment of protein localization to plasma
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008200
HOGENOM:HOG000091643 ChiTaRS:GNB2L1 HGNC:HGNC:4399 GO:GO:0015935
EMBL:AC008443 IPI:IPI00966041 ProteinModelPortal:D6RFX4 SMR:D6RFX4
Ensembl:ENST00000507000 UCSC:uc010jls.3 ArrayExpress:D6RFX4
Bgee:D6RFX4 Uniprot:D6RFX4
Length = 194
Score = 129 (50.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 45/176 (25%), Positives = 77/176 (43%)
Query: 59 VPEISVNGA---INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSA 115
+P+ ++ G ++ V SS G ++ S DG +RLWD + R VG H T + S
Sbjct: 13 IPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVG-H-TKDVLSV 70
Query: 116 NFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQ----LRFQAVFNDTEEFVLSI 171
F+ D R ++S +D T+KLW + G +H++ +RF N + ++S
Sbjct: 71 AFSSDNRQIVSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRFSP--NSSNPIIVSC 127
Query: 172 DEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIEH---SPAEAAFITCGTDRSVRFW 224
+ +W+ K +NHIG ++ SP + + G D W
Sbjct: 128 GW-DKLVKVWNLANC----KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLW 178
Score = 106 (42.4 bits), Expect = 0.00054, P = 0.00054
Identities = 34/144 (23%), Positives = 64/144 (44%)
Query: 10 KRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAIN 69
+RA R +H V V G F L+G+ L+D+ T + + +
Sbjct: 15 QRALR--GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTG----TTTRRFVGHTKDVL 68
Query: 70 QVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQR--FVLSC 127
V +SS V+ S+D I+LW+ + C ++ + + F+ + ++SC
Sbjct: 69 SVAFSSDNRQIVSGSRDKTIKLWNTLGV-CKYTVQDESHSEWVSCVRFSPNSSNPIIVSC 127
Query: 128 GKDSTVKLWEVSSGRLVKQYLGAT 151
G D VK+W +++ +L ++G T
Sbjct: 128 GWDKLVKVWNLANCKLKTNHIGHT 151
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 140 (54.3 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 32/115 (27%), Positives = 52/115 (45%)
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
++ V++ T S D +RLW N VR G G S F+ + +++ S
Sbjct: 429 VDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPV--LSLAFSPNGKYLASA 486
Query: 128 GKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWD 182
G+D +KLW+++SG L K+ G HT F+ + S N + +WD
Sbjct: 487 GEDQRLKLWDLASGTLFKELRG--HTDNITSLTFSPDSSLIASASM-DNSVRVWD 538
Score = 118 (46.6 bits), Expect = 0.00020, P = 0.00020
Identities = 30/121 (24%), Positives = 56/121 (46%)
Query: 21 NVRSVSFHPSGDFLLAGTDHPIAHLYDV---NTFQCYLSANVPEISVNGAINQVRYSSTG 77
+V V FHP+ ++L G+ L+ N+ + + P +S+ +S G
Sbjct: 428 DVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSL-------AFSPNG 480
Query: 78 GMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWE 137
+A +D ++LWD S + + G H T TS F+ D + S D++V++W+
Sbjct: 481 KYLASAGEDQRLKLWDLASGTLFKELRG-H-TDNITSLTFSPDSSLIASASMDNSVRVWD 538
Query: 138 V 138
+
Sbjct: 539 I 539
>UNIPROTKB|G4N183 [details] [associations]
symbol:MGG_07465 "Periodic tryptophan protein 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001233 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR011047 SUPFAM:SSF50998 KO:K14558 InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003
RefSeq:XP_003711369.1 ProteinModelPortal:G4N183
EnsemblFungi:MGG_07465T0 GeneID:2683385 KEGG:mgr:MGG_07465
Uniprot:G4N183
Length = 900
Score = 142 (55.0 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 37/158 (23%), Positives = 71/158 (44%)
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLS 126
++N + YS G VTA+ DG +++WD S C+ + H T+ T+ F K + +
Sbjct: 345 SMNALAYSPDGKRIVTAADDGKLKVWDIESGFCIVTFT-EH-TSGVTACQFAKKGNVLFT 402
Query: 127 CGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTA 186
D +++ W++ R + + T AV + + E V + S ++ IW T
Sbjct: 403 ASLDGSIRAWDLIRYRNFRTFTAPTRLSFSCMAV-DPSGEVVAAGSLDSFDVHIWSVQTG 461
Query: 187 EKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+ + + S H G + +P ++ D++ R W
Sbjct: 462 QLLDQLSG-HEGPVSAVAFAPDGGLLVSGSWDKTARIW 498
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 140 (54.3 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 32/115 (27%), Positives = 52/115 (45%)
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
++ V++ T S D +RLW N VR G G S F+ + +++ S
Sbjct: 447 VDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPV--LSLAFSPNGKYLASA 504
Query: 128 GKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWD 182
G+D +KLW+++SG L K+ G HT F+ + S N + +WD
Sbjct: 505 GEDQRLKLWDLASGTLYKELRG--HTDNITSLTFSPDSSLIASASM-DNSVRVWD 556
Score = 121 (47.7 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 39/152 (25%), Positives = 65/152 (42%)
Query: 21 NVRSVSFHPSGDFLLAGTDHPIAHLYDV---NTFQCYLSANVPEISVNGAINQVRYSSTG 77
+V V FHP+ ++L G+ L+ N+ + + P +S+ +S G
Sbjct: 446 DVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSL-------AFSPNG 498
Query: 78 GMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWE 137
+A +D ++LWD S + + G H T TS F+ D + S D++V++W+
Sbjct: 499 KYLASAGEDQRLKLWDLASGTLYKELRG-H-TDNITSLTFSPDSSLIASASMDNSVRVWD 556
Query: 138 V-----------SSGRLVKQYLGATHTQLRFQ 158
+ SSG LV Y G L Q
Sbjct: 557 IRNTYCSTPADGSSGELVGVYTGQMSNVLSVQ 588
>UNIPROTKB|O94967 [details] [associations]
symbol:WDR47 "WD repeat-containing protein 47" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0007275 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CH471122 eggNOG:COG2319
EMBL:AL449266 GO:GO:0005874 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 EMBL:BX679664 EMBL:AB020700 EMBL:AK289789
EMBL:BC034964 EMBL:BC039254 IPI:IPI00217629 IPI:IPI00479795
IPI:IPI00645640 RefSeq:NP_001136023.1 RefSeq:NP_055784.3
UniGene:Hs.570055 ProteinModelPortal:O94967 SMR:O94967
IntAct:O94967 MINT:MINT-1381291 STRING:O94967 PhosphoSite:O94967
PaxDb:O94967 PRIDE:O94967 DNASU:22911 Ensembl:ENST00000357672
Ensembl:ENST00000361054 Ensembl:ENST00000369962
Ensembl:ENST00000369965 GeneID:22911 KEGG:hsa:22911 UCSC:uc001dwi.3
UCSC:uc001dwj.3 UCSC:uc001dwk.2 CTD:22911 GeneCards:GC01M109512
HGNC:HGNC:29141 HPA:HPA027287 HPA:HPA027289 neXtProt:NX_O94967
PharmGKB:PA134937302 HOGENOM:HOG000231412 HOVERGEN:HBG058798
ChiTaRS:WDR47 GenomeRNAi:22911 NextBio:43585 ArrayExpress:O94967
Bgee:O94967 CleanEx:HS_WDR47 Genevestigator:O94967
GermOnline:ENSG00000085433 Uniprot:O94967
Length = 919
Score = 117 (46.2 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 42/159 (26%), Positives = 74/159 (46%)
Query: 73 YSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGA--HGTAEATSANFTKDQRFVLSCGK- 129
Y+ +G M + S+D +R WD +CVR +VG HGT A ++ +L+ G+
Sbjct: 762 YTWSGWMIASGSQDKTVRFWDLRVPSCVR-VVGTTFHGTGSAVASVAVDPSGRLLATGQE 820
Query: 130 DSTVKLWEVSSGRLVKQYL--GATHTQLRFQ--AVFNDTEEFVLSIDEPSNEIVIWDALT 185
DS+ L+++ GR+V+ Y + +RF A + T + + I + + L
Sbjct: 821 DSSCMLYDIRGGRMVQSYHPHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQGDLTKQLP 880
Query: 186 AEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
V + I RW H+ + +F++ DR+V W
Sbjct: 881 IMVVGEHKDKVIQC-RW--HTQ-DLSFLSSSADRTVTLW 915
Score = 69 (29.3 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 22/86 (25%), Positives = 40/86 (46%)
Query: 15 VIQDTHNVRSVSFHPSGDFLLAGTDHPIAHL--Y-DVNTFQCYLSANVPEISVN------ 65
+++DT VR+V+FHP+G G++ + Y DV + + P +
Sbjct: 602 ILEDTQAVRAVAFHPAGGLYAVGSNSKTLRVCAYPDVIDPSAHETPKQPVVRFKRNKHHK 661
Query: 66 GAINQVRYSSTGGMYVTASKDGAIRL 91
G+I V +S G + T S D +++
Sbjct: 662 GSIYCVAWSPCGQLLATGSNDKYVKV 687
>CGD|CAL0000650 [details] [associations]
symbol:orf19.2307 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:2000045 "regulation of G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0006379
"mRNA cleavage" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000650 GO:GO:0005634 GO:GO:0007059
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 EMBL:AACQ01000114
EMBL:AACQ01000113 RefSeq:XP_713912.1 RefSeq:XP_713970.1
ProteinModelPortal:Q59WJ4 STRING:Q59WJ4 GeneID:3644356
GeneID:3644415 KEGG:cal:CaO19.2307 KEGG:cal:CaO19.9843 KO:K15542
Uniprot:Q59WJ4
Length = 543
Score = 139 (54.0 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 52/209 (24%), Positives = 89/209 (42%)
Query: 13 FRVIQDTHN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNG-AIN 69
F I H + ++ + ++LL+G + + N F NV IS + +
Sbjct: 169 FETIMQAHESPILTMKYSNHDEWLLSGDQNGTVKYWQPN-FN-----NVNNISAHANGVR 222
Query: 70 QVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGK 129
+ +S ++T D AI++W+ + R++ G H E SA++ + ++S K
Sbjct: 223 DIAFSPNDSKFLTCGDDSAIKIWNFNNGKEERTLSGHHW--EVKSADWHPNLGLIVSGSK 280
Query: 130 DSTVKLWEVSSGRLVKQYLGATHT--QLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE 187
D+ VKLW+ S V G HT + RFQ N T + S+ I+D T +
Sbjct: 281 DNLVKLWDPRSANCVSTLHGFKHTVNKTRFQP--NGTARLLASVSR-DRSCRIFDLRTMK 337
Query: 188 K--VAKWSSNHIGAPRWIEHSPAEAAFIT 214
V + S + W H P A+ +T
Sbjct: 338 DMLVIRDSETDLSCVAW--H-PIHASMVT 363
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 47/207 (22%), Positives = 89/207 (42%)
Query: 20 HNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGM 79
H + +V + P G LL + L++ TF E I ++YS+
Sbjct: 136 HTINTVKWTPEGRRLLVASHSGEFTLWNGMTFNFETIMQAHE----SPILTMKYSNHDEW 191
Query: 80 YVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVS 139
++ ++G ++ W + N V +I AH A D +F L+CG DS +K+W +
Sbjct: 192 LLSGDQNGTVKYWQP-NFNNVNNI-SAHANGVRDIAFSPNDSKF-LTCGDDSAIKIWNFN 248
Query: 140 SGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSS-NH-I 197
+G+ ++ L H +++ A ++ ++S N + +WD +A V+ H +
Sbjct: 249 NGK-EERTLSGHHWEVK-SADWHPNLGLIVS-GSKDNLVKLWDPRSANCVSTLHGFKHTV 305
Query: 198 GAPRWIEHSPAEAAFITCGTDRSVRFW 224
R+ + A + DRS R +
Sbjct: 306 NKTRFQPNGTARL-LASVSRDRSCRIF 331
Score = 113 (44.8 bits), Expect = 0.00068, P = 0.00068
Identities = 43/180 (23%), Positives = 81/180 (45%)
Query: 47 DVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGA 106
D+ T +LS+N V IN V+++ G + AS G LW+G++ N +I+ A
Sbjct: 121 DLQTKFVHLSSN----KVKHTINTVKWTPEGRRLLVASHSGEFTLWNGMTFN-FETIMQA 175
Query: 107 HGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEE 166
H + T ++ ++LS ++ TVK W+ + + + A +R A + +
Sbjct: 176 HESPILTM-KYSNHDEWLLSGDQNGTVKYWQPNFNNV--NNISAHANGVRDIAFSPNDSK 232
Query: 167 FVLSIDEPSNEIVIWDALTAEKVAKWSSNH--IGAPRWIEHSPAEAAFITCGTDRSVRFW 224
F+ D+ + I IW+ ++ S +H + + W H P ++ D V+ W
Sbjct: 233 FLTCGDDSA--IKIWNFNNGKEERTLSGHHWEVKSADW--H-PNLGLIVSGSKDNLVKLW 287
>UNIPROTKB|Q59WJ4 [details] [associations]
symbol:PFS2 "Polyadenylation factor subunit 2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000650 GO:GO:0005634
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397
EMBL:AACQ01000114 EMBL:AACQ01000113 RefSeq:XP_713912.1
RefSeq:XP_713970.1 ProteinModelPortal:Q59WJ4 STRING:Q59WJ4
GeneID:3644356 GeneID:3644415 KEGG:cal:CaO19.2307
KEGG:cal:CaO19.9843 KO:K15542 Uniprot:Q59WJ4
Length = 543
Score = 139 (54.0 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 52/209 (24%), Positives = 89/209 (42%)
Query: 13 FRVIQDTHN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNG-AIN 69
F I H + ++ + ++LL+G + + N F NV IS + +
Sbjct: 169 FETIMQAHESPILTMKYSNHDEWLLSGDQNGTVKYWQPN-FN-----NVNNISAHANGVR 222
Query: 70 QVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGK 129
+ +S ++T D AI++W+ + R++ G H E SA++ + ++S K
Sbjct: 223 DIAFSPNDSKFLTCGDDSAIKIWNFNNGKEERTLSGHHW--EVKSADWHPNLGLIVSGSK 280
Query: 130 DSTVKLWEVSSGRLVKQYLGATHT--QLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE 187
D+ VKLW+ S V G HT + RFQ N T + S+ I+D T +
Sbjct: 281 DNLVKLWDPRSANCVSTLHGFKHTVNKTRFQP--NGTARLLASVSR-DRSCRIFDLRTMK 337
Query: 188 K--VAKWSSNHIGAPRWIEHSPAEAAFIT 214
V + S + W H P A+ +T
Sbjct: 338 DMLVIRDSETDLSCVAW--H-PIHASMVT 363
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 47/207 (22%), Positives = 89/207 (42%)
Query: 20 HNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGM 79
H + +V + P G LL + L++ TF E I ++YS+
Sbjct: 136 HTINTVKWTPEGRRLLVASHSGEFTLWNGMTFNFETIMQAHE----SPILTMKYSNHDEW 191
Query: 80 YVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVS 139
++ ++G ++ W + N V +I AH A D +F L+CG DS +K+W +
Sbjct: 192 LLSGDQNGTVKYWQP-NFNNVNNI-SAHANGVRDIAFSPNDSKF-LTCGDDSAIKIWNFN 248
Query: 140 SGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSS-NH-I 197
+G+ ++ L H +++ A ++ ++S N + +WD +A V+ H +
Sbjct: 249 NGK-EERTLSGHHWEVK-SADWHPNLGLIVS-GSKDNLVKLWDPRSANCVSTLHGFKHTV 305
Query: 198 GAPRWIEHSPAEAAFITCGTDRSVRFW 224
R+ + A + DRS R +
Sbjct: 306 NKTRFQPNGTARL-LASVSRDRSCRIF 331
Score = 113 (44.8 bits), Expect = 0.00068, P = 0.00068
Identities = 43/180 (23%), Positives = 81/180 (45%)
Query: 47 DVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGA 106
D+ T +LS+N V IN V+++ G + AS G LW+G++ N +I+ A
Sbjct: 121 DLQTKFVHLSSN----KVKHTINTVKWTPEGRRLLVASHSGEFTLWNGMTFN-FETIMQA 175
Query: 107 HGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEE 166
H + T ++ ++LS ++ TVK W+ + + + A +R A + +
Sbjct: 176 HESPILTM-KYSNHDEWLLSGDQNGTVKYWQPNFNNV--NNISAHANGVRDIAFSPNDSK 232
Query: 167 FVLSIDEPSNEIVIWDALTAEKVAKWSSNH--IGAPRWIEHSPAEAAFITCGTDRSVRFW 224
F+ D+ + I IW+ ++ S +H + + W H P ++ D V+ W
Sbjct: 233 FLTCGDDSA--IKIWNFNNGKEERTLSGHHWEVKSADW--H-PNLGLIVSGSKDNLVKLW 287
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 139 (54.0 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 32/115 (27%), Positives = 53/115 (46%)
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
++ V++ T S D +RLW N VR G G A + F+ + +++ S
Sbjct: 429 VDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALA--FSPNGKYLASA 486
Query: 128 GKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWD 182
G+D +KLW+++SG L K+ G HT F+ + S N + +WD
Sbjct: 487 GEDQRLKLWDLASGTLYKELRG--HTDNITSLTFSPDSSLIASASM-DNSVRVWD 538
Score = 115 (45.5 bits), Expect = 0.00042, P = 0.00042
Identities = 29/121 (23%), Positives = 56/121 (46%)
Query: 21 NVRSVSFHPSGDFLLAGTDHPIAHLYDV---NTFQCYLSANVPEISVNGAINQVRYSSTG 77
+V V FHP+ ++L G+ L+ N+ + + P +++ +S G
Sbjct: 428 DVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLAL-------AFSPNG 480
Query: 78 GMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWE 137
+A +D ++LWD S + + G H T TS F+ D + S D++V++W+
Sbjct: 481 KYLASAGEDQRLKLWDLASGTLYKELRG-H-TDNITSLTFSPDSSLIASASMDNSVRVWD 538
Query: 138 V 138
+
Sbjct: 539 I 539
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 135 (52.6 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 45/181 (24%), Positives = 83/181 (45%)
Query: 4 FSKATAKRAFRVIQDTHN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPE 61
F T K+ + + DT + S+++ P G +L +G I +++D+ T + +
Sbjct: 133 FGVETGKKEYSL--DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 190
Query: 62 ISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
+ I + +S + VTAS DG I+++D AN ++ G HG+ A D
Sbjct: 191 MP----IRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG-HGSWVLNVAFCPDDT 245
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
FV S D +VK+W+ + V + H + +N + ++S+ + EI I+
Sbjct: 246 HFV-SSSSDKSVKVWDAGTRTCVHTFFD--HQDQVWGVKYNGSGSKIVSVGD-DQEIHIY 301
Query: 182 D 182
D
Sbjct: 302 D 302
Score = 119 (46.9 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 44/202 (21%), Positives = 84/202 (41%)
Query: 24 SVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGA-INQVRYSSTGGMYVT 82
S++F P FL G+ H+ VN F + G I + YS G +
Sbjct: 111 SLAFSPDSQFLATGS-----HVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLAS 165
Query: 83 ASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGR 142
+ DG I ++D + + ++ G H S F+ D + +++ D +K+++V
Sbjct: 166 GAIDGIINIFDIATGKLLHTLEG-HAMP-IRSLTFSPDSQLLVTASDDGYIKIYDVQHAN 223
Query: 143 LVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRW 202
L G L +DT FV S + S + +WDA T V + +H
Sbjct: 224 LAGTLSGHGSWVLNVAFCPDDTH-FVSSSSDKS--VKVWDAGTRTCVHTFF-DHQDQVWG 279
Query: 203 IEHSPAEAAFITCGTDRSVRFW 224
++++ + + ++ G D+ + +
Sbjct: 280 VKYNGSGSKIVSVGDDQEIHIY 301
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 135 (52.6 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 45/181 (24%), Positives = 83/181 (45%)
Query: 4 FSKATAKRAFRVIQDTHN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPE 61
F T K+ + + DT + S+++ P G +L +G I +++D+ T + +
Sbjct: 133 FGVETGKKEYSL--DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 190
Query: 62 ISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
+ I + +S + VTAS DG I+++D AN ++ G HG+ A D
Sbjct: 191 MP----IRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG-HGSWVLNVAFCPDDT 245
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
FV S D +VK+W+ + V + H + +N + ++S+ + EI I+
Sbjct: 246 HFV-SSSSDKSVKVWDAGTRTCVHTFFD--HQDQVWGVKYNGSGSKIVSVGD-DQEIHIY 301
Query: 182 D 182
D
Sbjct: 302 D 302
Score = 119 (46.9 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 44/202 (21%), Positives = 84/202 (41%)
Query: 24 SVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGA-INQVRYSSTGGMYVT 82
S++F P FL G+ H+ VN F + G I + YS G +
Sbjct: 111 SLAFSPDSQFLATGS-----HVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLAS 165
Query: 83 ASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGR 142
+ DG I ++D + + ++ G H S F+ D + +++ D +K+++V
Sbjct: 166 GAIDGIINIFDIATGKLLHTLEG-HAMP-IRSLTFSPDSQLLVTASDDGYIKIYDVQHAN 223
Query: 143 LVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRW 202
L G L +DT FV S + S + +WDA T V + +H
Sbjct: 224 LAGTLSGHGSWVLNVAFCPDDTH-FVSSSSDKS--VKVWDAGTRTCVHTFF-DHQDQVWG 279
Query: 203 IEHSPAEAAFITCGTDRSVRFW 224
++++ + + ++ G D+ + +
Sbjct: 280 VKYNGSGSKIVSVGDDQEIHIY 301
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 139 (54.0 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 33/115 (28%), Positives = 52/115 (45%)
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
++ V++ T S D +RLW N VR G G S F+ + +++ S
Sbjct: 425 VDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPV--LSLAFSPNGKYLASA 482
Query: 128 GKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWD 182
G+D +KLW+++SG L K+ G HT F+ V S N + +WD
Sbjct: 483 GEDQRLKLWDLASGTLYKELRG--HTDNITSLTFSPDSSLVASASM-DNSVRVWD 534
Score = 112 (44.5 bits), Expect = 0.00099, P = 0.00099
Identities = 35/145 (24%), Positives = 57/145 (39%)
Query: 80 YVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVS 139
+ +AS D RLW +R G H A+ F + ++ + D TV+LW
Sbjct: 395 FASASHDRTARLWSFDRTYPLRIYAG-H-LADVDCVKFHPNSNYLATGSTDKTVRLWSTQ 452
Query: 140 SGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGA 199
G V+ + G H F+ +++ S E + +WD L + + K H
Sbjct: 453 QGNSVRLFTG--HRGPVLSLAFSPNGKYLASAGE-DQRLKLWD-LASGTLYKELRGHTDN 508
Query: 200 PRWIEHSPAEAAFITCGTDRSVRFW 224
+ SP + + D SVR W
Sbjct: 509 ITSLTFSPDSSLVASASMDNSVRVW 533
>ZFIN|ZDB-GENE-050417-342 [details] [associations]
symbol:nsmaf "neutral sphingomyelinase (N-SMase)
activation associated factor" species:7955 "Danio rerio"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pfam:PF02893 ZFIN:ZDB-GENE-050417-342
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR004182 SMART:SM00568
Gene3D:1.10.1540.10 Gene3D:2.30.29.40 InterPro:IPR000409
InterPro:IPR023362 Pfam:PF02138 SMART:SM01026 SUPFAM:SSF81837
PROSITE:PS50197 GeneTree:ENSGT00670000097747 CTD:8439 EMBL:CR354563
EMBL:CU929087 IPI:IPI00497443 RefSeq:XP_003199050.1
UniGene:Dr.88496 Ensembl:ENSDART00000073635 GeneID:550506
KEGG:dre:550506 NextBio:20879748 ArrayExpress:F1QZ06 Bgee:F1QZ06
Uniprot:F1QZ06
Length = 911
Score = 141 (54.7 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 44/165 (26%), Positives = 75/165 (45%)
Query: 61 EISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKD 120
E +N + S G + T +K+G + +WD S V + G + F+ D
Sbjct: 752 EFEHEAGVNTLDLSPAGTLLATGTKEGTLTVWDLASPLPVNQLTCHSGKIHQVA--FSPD 809
Query: 121 QRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVI 180
R +LS G+DS + + +V +G L+ AT + Q F VLS S ++ +
Sbjct: 810 SRHILSVGEDSCLMVTDVQTGMLI-----ATIPAEQEQRCFCWDGNTVLS-GGISGDLSV 863
Query: 181 WDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
W+ L ++ V K + H GA + + ++ IT G D+ + WK
Sbjct: 864 WNLLNSKVVHKIPAAHSGAVTCMWMNEQCSSIITGGLDKQIILWK 908
>UNIPROTKB|E2R5F8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 CTD:55054 GO:GO:0000421 InterPro:IPR013923
Pfam:PF08614 OMA:LETECQE EMBL:AAEX03014453 RefSeq:XP_850664.1
ProteinModelPortal:E2R5F8 Ensembl:ENSCAFT00000018720 GeneID:477412
KEGG:cfa:477412 NextBio:20852897 Uniprot:E2R5F8
Length = 607
Score = 139 (54.0 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 54/208 (25%), Positives = 93/208 (44%)
Query: 16 IQDTHN--VRSVSFHPSGDFLLA--GTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQV 71
I D H+ V +V F P G LLA G D + L++V +C ++ N I +
Sbjct: 317 IFDAHDGEVNAVQFSP-GSRLLATGGMDRRVK-LWEVFGDKCEFKGSLS--GSNAGITSI 372
Query: 72 RYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDS 131
+ S G + AS D A R+W V +R + H + + SA F D ++S D
Sbjct: 373 EFDSAGSYLLAASNDFASRIWT-VDDYRLRHTLTGH-SGKVLSAKFLLDNARIVSGSHDR 430
Query: 132 TVKLWEVSSGRLVKQ-YLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVA 190
T+KLW++ S +K + G++ + TE+ V+S +I WD + +E +
Sbjct: 431 TLKLWDLRSKVCIKTVFAGSSCNDIVC------TEQCVMS-GHFDKKIRFWD-IRSESIV 482
Query: 191 KWSSNHIGAPRWIEHSPAEAAFITCGTD 218
+ +G ++ +P ++C D
Sbjct: 483 R-EMELLGKITALDLNPERTELLSCSRD 509
>POMBASE|SPBC713.05 [details] [associations]
symbol:SPBC713.05 "WD repeat protein, human MAPK
organizer 1 (MORG1) family (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISS]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC713.05 GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0071276 GO:GO:0071585
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045292
HOGENOM:HOG000091642 KO:K13124 OMA:CKQGAVR RefSeq:NP_595344.1
ProteinModelPortal:Q9C1X0 EnsemblFungi:SPBC713.05.1 GeneID:2541181
KEGG:spo:SPBC713.05 OrthoDB:EOG4K9FNP NextBio:20802293
Uniprot:Q9C1X0
Length = 297
Score = 134 (52.2 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 32/115 (27%), Positives = 58/115 (50%)
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
IN V+Y+ TG + A + +RLW+ S C+ G HG E + D SC
Sbjct: 17 INVVKYNRTGKYVLAAGNERVVRLWNVKSGACIHEYAG-HGH-EILDLDLVYDSTKFASC 74
Query: 128 GKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWD 182
G D +++W+V++G+ V + LG Q+ +N+ + +L+ +++ +WD
Sbjct: 75 GGDKFIQVWDVNTGK-VDRRLGGHLAQIN-TIRYNE-DSSILASGSFDSKVRLWD 126
Score = 125 (49.1 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 32/122 (26%), Positives = 61/122 (50%)
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
+ VT S DG +R +D + + S +H TS +K F L +S++ L +
Sbjct: 154 LIVTGSTDGTLRTYD-IRKGTLSSDYFSH---PITSVKTSKSASFSLISSLNSSIHLLDQ 209
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIG 198
+G+++K Y+G + + R ++ FN +E V S E ++ +WD ++ S++ +G
Sbjct: 210 ETGKILKSYIGLKNMEYRVRSSFNQSETIVFSGSE-DGKVYLWDLENETQIT--STSVVG 266
Query: 199 AP 200
P
Sbjct: 267 TP 268
Score = 114 (45.2 bits), Expect = 0.00019, P = 0.00019
Identities = 29/109 (26%), Positives = 52/109 (47%)
Query: 117 FTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSN 176
+ + ++VL+ G + V+LW V SG + +Y G H L V++ T+ D+
Sbjct: 22 YNRTGKYVLAAGNERVVRLWNVKSGACIHEYAGHGHEILDLDLVYDSTKFASCGGDK--- 78
Query: 177 EIVIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGT-DRSVRFW 224
I +WD T KV + H+ I ++ +++ + G+ D VR W
Sbjct: 79 FIQVWDVNTG-KVDRRLGGHLAQINTIRYNE-DSSILASGSFDSKVRLW 125
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 139 (54.0 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 47/210 (22%), Positives = 87/210 (41%)
Query: 26 SFHPSGDFLLAGTDHPIAHLYDV-----NTFQCYLSANVP----EISVNGAINQVRYSST 76
+++PS D L +G+ A ++D+ N+ Q L + E+ N + + ++
Sbjct: 362 AWNPSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAEVPSNKDVTSLDWNCD 421
Query: 77 GGMYVTASKDGAIRLW--DGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVK 134
G + T S DG R+W DG A S +G H + + K ++LS G D T
Sbjct: 422 GSLLATGSYDGYARIWKTDGRLA----STLGQH-KGPIFALKWNKCGNYILSAGVDKTTI 476
Query: 135 LWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSS 194
+W+ S+G+ +Q+ A H+ + + F + + K K +
Sbjct: 477 IWDASTGQCTQQF--AFHSAPALDVDWQTNQAFASCSTDQRIHVCRLGVNEPIKTFKGHT 534
Query: 195 NHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
N + A +W P +C D +++ W
Sbjct: 535 NEVNAIKWC---PQGQLLASCSDDMTLKIW 561
Score = 122 (48.0 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 35/136 (25%), Positives = 63/136 (46%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCY--LSANVPEI-SVNGAINQ--VRY 73
T+ V ++ + P G L + +D ++ +N +C L A+ EI ++ +
Sbjct: 534 TNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSPTGPGTNN 593
Query: 74 SSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTV 133
+T + +AS D +RLWD +C+ ++ H T S F+ D + + S D V
Sbjct: 594 PNTNLILASASFDSTVRLWDVERGSCIHTLT-KH-TEPVYSVAFSPDGKHLASGSFDKCV 651
Query: 134 KLWEVSSGRLVKQYLG 149
+W +G+LV Y G
Sbjct: 652 HIWSTQTGQLVHSYKG 667
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 139 (54.0 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 48/177 (27%), Positives = 81/177 (45%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
V V F P G + ++ + A L+ ++ Q L V +S ++ V++
Sbjct: 495 VWDVRFAPHGYYFVSCSYDKTARLWATDSNQA-LRVFVGHLS---DVDCVQFHPNSNYVA 550
Query: 82 TASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSG 141
T S D +RLWD ++ VR + G G+ +S F+ R++ S D + +W++S+G
Sbjct: 551 TGSSDRTVRLWDNMTGQSVRLMTGHKGSV--SSLAFSACGRYLASGSVDHNIIIWDLSNG 608
Query: 142 RLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAK-WSSNHI 197
LV L HT F+ + VL+ N + +WD KV + + SNHI
Sbjct: 609 SLVTTLL--RHTSTVTTITFS-RDGTVLAAAGLDNNLTLWDF---HKVTEDYISNHI 659
Score = 127 (49.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 49/206 (23%), Positives = 82/206 (39%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T V +F P + LL+ ++ L+ + T+ C ++ V VR++ G
Sbjct: 450 TGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVW----DVRFAPHGY 505
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
+V+ S D RLW S +R VG H ++ F + +V + D TV+LW+
Sbjct: 506 YFVSCSYDKTARLWATDSNQALRVFVG-H-LSDVDCVQFHPNSNYVATGSSDRTVRLWDN 563
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIG 198
+G+ V+ G H F+ ++ S N I+IWD L+ + H
Sbjct: 564 MTGQSVRLMTG--HKGSVSSLAFSACGRYLASGSVDHN-IIIWD-LSNGSLVTTLLRHTS 619
Query: 199 APRWIEHSPAEAAFITCGTDRSVRFW 224
I S G D ++ W
Sbjct: 620 TVTTITFSRDGTVLAAAGLDNNLTLW 645
Score = 123 (48.4 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 36/162 (22%), Positives = 79/162 (48%)
Query: 9 AKRAFRV-IQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGA 67
+ +A RV + +V V FHP+ +++ G+ L+D T Q S + G+
Sbjct: 523 SNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQ---SVRLMT-GHKGS 578
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
++ + +S+ G + S D I +WD + + V +++ H T+ T+ F++D + +
Sbjct: 579 VSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLL-RH-TSTVTTITFSRDGTVLAAA 636
Query: 128 GKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVL 169
G D+ + LW+ ++ + Y+ + H + ND + +++
Sbjct: 637 GLDNNLTLWDFH--KVTEDYI-SNHITVSHHQDENDEDVYLM 675
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 138 (53.6 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 32/115 (27%), Positives = 52/115 (45%)
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
++ V++ T S D +RLW N VR G G S F+ + +++ S
Sbjct: 429 VDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPV--LSLAFSPNGKYLASA 486
Query: 128 GKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWD 182
G+D +KLW+++SG L K+ G HT F+ + S N + +WD
Sbjct: 487 GEDQRLKLWDLASGTLYKELRG--HTDNITSLTFSPDSGLIASASM-DNSVRVWD 538
Score = 117 (46.2 bits), Expect = 0.00026, P = 0.00026
Identities = 30/121 (24%), Positives = 56/121 (46%)
Query: 21 NVRSVSFHPSGDFLLAGTDHPIAHLYDV---NTFQCYLSANVPEISVNGAINQVRYSSTG 77
+V V FHP+ ++L G+ L+ N+ + + P +S+ +S G
Sbjct: 428 DVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSL-------AFSPNG 480
Query: 78 GMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWE 137
+A +D ++LWD S + + G H T TS F+ D + S D++V++W+
Sbjct: 481 KYLASAGEDQRLKLWDLASGTLYKELRG-H-TDNITSLTFSPDSGLIASASMDNSVRVWD 538
Query: 138 V 138
+
Sbjct: 539 I 539
>GENEDB_PFALCIPARUM|PFC0100c [details] [associations]
symbol:PFC0100c "regulatory protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 138 (53.6 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 58/229 (25%), Positives = 99/229 (43%)
Query: 14 RVIQDTHN----VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVN-GAI 68
+VI+D H V +S HPS D L++G + ++D+ T ++V +S + G +
Sbjct: 361 KVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRT-----KSSVFVLSGHTGTV 415
Query: 69 NQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCG 128
+ S V+ S+D IRLWD + C S+ H S + + SCG
Sbjct: 416 MSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLT--HHKKSIRSLSIHPFEYSFCSCG 473
Query: 129 KDSTVKLW---EVSSGRLVKQYLGATHTQLRFQ-AVFNDTEEFVLSIDEPSNEIVIWDAL 184
D+ VK+W + R + + + L Q FND+ +L + + ++ +D
Sbjct: 474 TDN-VKVWCGADAEFDRNITGFNSIINCSLIKQDPYFNDSS--ILILGSNNGQLHFYDWS 530
Query: 185 TAEKVAKWSSNHIGAPRWIEHSPAEAAF-------ITCGTDRSVRFWKE 226
+ K S+ + E+S AF IT D+S++ WKE
Sbjct: 531 SGYKYDTLSNKVVPGTVECENSTLSMAFDKSESRLITTHGDKSIKIWKE 579
Score = 130 (50.8 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 36/160 (22%), Positives = 69/160 (43%)
Query: 65 NGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFV 124
+G +N V + + T S D I++WD S ++ G H + +K ++
Sbjct: 286 SGWVNCVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTG-HINS-IRDIKISKKNPYL 343
Query: 125 LSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDAL 184
SCG+D+ VK W++ ++++ Y G H + + + + ++S + + +WD
Sbjct: 344 FSCGEDNRVKCWDLEYNKVIRDYHG--HLSGVYCLSLHPSLDLLMSGGRDA-VVRVWDIR 400
Query: 185 TAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
T V S H G I E ++ D+ +R W
Sbjct: 401 TKSSVFVLSG-HTGTVMSICSQSVEPQVVSGSQDKMIRLW 439
>UNIPROTKB|O97334 [details] [associations]
symbol:PFC0100c "Regulatory protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 138 (53.6 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 58/229 (25%), Positives = 99/229 (43%)
Query: 14 RVIQDTHN----VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVN-GAI 68
+VI+D H V +S HPS D L++G + ++D+ T ++V +S + G +
Sbjct: 361 KVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRT-----KSSVFVLSGHTGTV 415
Query: 69 NQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCG 128
+ S V+ S+D IRLWD + C S+ H S + + SCG
Sbjct: 416 MSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLT--HHKKSIRSLSIHPFEYSFCSCG 473
Query: 129 KDSTVKLW---EVSSGRLVKQYLGATHTQLRFQ-AVFNDTEEFVLSIDEPSNEIVIWDAL 184
D+ VK+W + R + + + L Q FND+ +L + + ++ +D
Sbjct: 474 TDN-VKVWCGADAEFDRNITGFNSIINCSLIKQDPYFNDSS--ILILGSNNGQLHFYDWS 530
Query: 185 TAEKVAKWSSNHIGAPRWIEHSPAEAAF-------ITCGTDRSVRFWKE 226
+ K S+ + E+S AF IT D+S++ WKE
Sbjct: 531 SGYKYDTLSNKVVPGTVECENSTLSMAFDKSESRLITTHGDKSIKIWKE 579
Score = 130 (50.8 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 36/160 (22%), Positives = 69/160 (43%)
Query: 65 NGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFV 124
+G +N V + + T S D I++WD S ++ G H + +K ++
Sbjct: 286 SGWVNCVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTG-HINS-IRDIKISKKNPYL 343
Query: 125 LSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDAL 184
SCG+D+ VK W++ ++++ Y G H + + + + ++S + + +WD
Sbjct: 344 FSCGEDNRVKCWDLEYNKVIRDYHG--HLSGVYCLSLHPSLDLLMSGGRDA-VVRVWDIR 400
Query: 185 TAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
T V S H G I E ++ D+ +R W
Sbjct: 401 TKSSVFVLSG-HTGTVMSICSQSVEPQVVSGSQDKMIRLW 439
>UNIPROTKB|Q676U5 [details] [associations]
symbol:ATG16L1 "Autophagy-related protein 16-1"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] [GO:0034045 "pre-autophagosomal structure membrane"
evidence=IEA] [GO:0005776 "autophagic vacuole" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=NAS] [GO:0000045
"autophagic vacuole assembly" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 EMBL:CH471063 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AY398617 EMBL:EF079889
EMBL:EF079890 EMBL:AY358182 EMBL:AK026330 EMBL:AK027854
EMBL:AK123876 EMBL:AC013726 EMBL:BC071846 EMBL:AL834526
IPI:IPI00432751 IPI:IPI00446614 IPI:IPI00470446 IPI:IPI00555905
IPI:IPI00797150 RefSeq:NP_001177195.1 RefSeq:NP_001177196.1
RefSeq:NP_060444.3 RefSeq:NP_110430.5 RefSeq:NP_942593.2
UniGene:Hs.529322 PDB:4GDK PDB:4GDL PDBsum:4GDK PDBsum:4GDL
ProteinModelPortal:Q676U5 SMR:Q676U5 DIP:DIP-27552N IntAct:Q676U5
MINT:MINT-1141152 STRING:Q676U5 PhosphoSite:Q676U5 DMDM:62510482
PaxDb:Q676U5 PRIDE:Q676U5 DNASU:55054 Ensembl:ENST00000347464
Ensembl:ENST00000373525 Ensembl:ENST00000392017
Ensembl:ENST00000392020 GeneID:55054 KEGG:hsa:55054 UCSC:uc002vty.3
UCSC:uc002vtz.3 UCSC:uc002vua.3 CTD:55054 GeneCards:GC02P234118
HGNC:HGNC:21498 HPA:HPA012577 MIM:610767 MIM:611081
neXtProt:NX_Q676U5 Orphanet:206 PharmGKB:PA134902949
HOGENOM:HOG000112569 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8
GenomeRNAi:55054 NextBio:58531 ArrayExpress:Q676U5 Bgee:Q676U5
CleanEx:HS_ATG16L1 Genevestigator:Q676U5 GermOnline:ENSG00000085978
GO:GO:0005776 GO:GO:0000421 GO:GO:0034045 GO:GO:0000045
GO:GO:0051260 InterPro:IPR013923 Pfam:PF08614 Uniprot:Q676U5
Length = 607
Score = 138 (53.6 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 53/206 (25%), Positives = 92/206 (44%)
Query: 18 DTHN--VRSVSFHPSGDFLLA--GTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRY 73
D H+ V +V F P G LLA G D + L++V +C ++ N I + +
Sbjct: 319 DAHDGEVNAVQFSP-GSRLLATGGMDRRVK-LWEVFGEKCEFKGSLS--GSNAGITSIEF 374
Query: 74 SSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTV 133
S G + AS D A R+W V +R + H + + SA F D ++S D T+
Sbjct: 375 DSAGSYLLAASNDFASRIWT-VDDYRLRHTLTGH-SGKVLSAKFLLDNARIVSGSHDRTL 432
Query: 134 KLWEVSSGRLVKQ-YLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKW 192
KLW++ S +K + G++ + TE+ V+S +I WD + +E + +
Sbjct: 433 KLWDLRSKVCIKTVFAGSSCNDIVC------TEQCVMS-GHFDKKIRFWD-IRSESIVR- 483
Query: 193 SSNHIGAPRWIEHSPAEAAFITCGTD 218
+G ++ +P ++C D
Sbjct: 484 EMELLGKITALDLNPERTELLSCSRD 509
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 137 (53.3 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 55/210 (26%), Positives = 84/210 (40%)
Query: 20 HNVR--SVSFHPSGDFLLAGT---DHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYS 74
H++R V++HPSG FL GT DH L+D+ + L E G ++ + +
Sbjct: 307 HSMRVARVTWHPSGRFL--GTTCYDHSW-RLWDLEVQEEILHQ---EGHSKG-VHDLHFH 359
Query: 75 STGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVK 134
G + T D R+WD + CV + G H E S NF+ + V + D+ K
Sbjct: 360 PDGSLAGTGGLDSFARVWDLRTGRCVMFLEG-H-IKEIYSINFSPNGFHVATGSGDNACK 417
Query: 135 LWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSS 194
+W++ R + Y H L F + L N IW K +
Sbjct: 418 VWDLRQRRCI--YTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTH-PGWSPLKTLA 474
Query: 195 NHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
H G ++ SP TC DR+ + W
Sbjct: 475 GHEGKVMGVDLSPDGQLIATCSYDRTFKLW 504
Score = 122 (48.0 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 40/127 (31%), Positives = 62/127 (48%)
Query: 17 QDTHN--VRSVSFHPSGDFLLAGTD--HPIAHLYDVNTFQC--YLSANVPEISVNGAINQ 70
Q+ H+ V + FHP G LAGT A ++D+ T +C +L ++ EI +IN
Sbjct: 346 QEGHSKGVHDLHFHPDGS--LAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIY---SIN- 399
Query: 71 VRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFT-KDQRFVLSCGK 129
+S G T S D A ++WD C+ +I AH +S F D ++L+
Sbjct: 400 --FSPNGFHVATGSGDNACKVWDLRQRRCIYTIP-AHQNL-VSSVKFQPNDGHYLLTGAY 455
Query: 130 DSTVKLW 136
D+T K+W
Sbjct: 456 DNTAKIW 462
>WB|WBGene00017435 [details] [associations]
symbol:F13H8.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006898 GO:GO:0040010 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD EMBL:FO080709 RefSeq:NP_495256.1
ProteinModelPortal:Q19433 SMR:Q19433 DIP:DIP-25827N
MINT:MINT-1128581 STRING:Q19433 PaxDb:Q19433 EnsemblMetazoa:F13H8.2
GeneID:174038 KEGG:cel:CELE_F13H8.2 UCSC:F13H8.2 CTD:174038
WormBase:F13H8.2 InParanoid:Q19433 NextBio:882237 Uniprot:Q19433
Length = 929
Score = 140 (54.3 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 29/75 (38%), Positives = 43/75 (57%)
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEA-TSANFTKDQRFVL 125
A+N + +SS G ++ T KDG I LWD + A R + HG E+ T F + RF++
Sbjct: 105 AVNCIEFSSDGLLFATGGKDGVIVLWD-ILAE--RGMFRLHGHKESVTQMKFVRGDRFII 161
Query: 126 SCGKDSTVKLWEVSS 140
S KDS +K W ++S
Sbjct: 162 STSKDSLIKFWSIAS 176
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 137 (53.3 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 35/149 (23%), Positives = 68/149 (45%)
Query: 78 GMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWE 137
G V+ +D I++WD CV++++G H T + D + ++S DSTV++W+
Sbjct: 221 GKIVSGLRDNTIKIWDRTDLQCVKTLMG-H-TGSVLCLQY--DDKVIISGSSDSTVRVWD 276
Query: 138 VSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVA--KWSSN 195
V++G +V + H + FN+ S D I +WD + ++ +
Sbjct: 277 VNTGEMVNTLIH--HCEAVLHLRFNNGMMVTCSKDR---SIAVWDMTSPSEITLRRVLVG 331
Query: 196 HIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
H A ++ E ++ DR+++ W
Sbjct: 332 HRAAVNVVDFD--EKYIVSASGDRTIKVW 358
Score = 123 (48.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 40/151 (26%), Positives = 74/151 (49%)
Query: 34 LLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTASKDGAIRLWD 93
+++G+ ++DVNT + ++ + A+ +R+++ GM VT SKD +I +WD
Sbjct: 263 IISGSSDSTVRVWDVNTGEM-VNTLIHHCE---AVLHLRFNN--GMMVTCSKDRSIAVWD 316
Query: 94 GVSAN--CVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGAT 151
S + +R ++ H A +F D+++++S D T+K+W S+ V+ G
Sbjct: 317 MTSPSEITLRRVLVGHRAA-VNVVDF--DEKYIVSASGDRTIKVWSTSTCEFVRTLNG-- 371
Query: 152 HTQLRFQAVFNDTEEFVLSIDEPSNEIVIWD 182
H R A + V+S N I +WD
Sbjct: 372 HK--RGIACLQYRDRLVVS-GSSDNSIRLWD 399
>WB|WBGene00004895 [details] [associations]
symbol:smu-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IGI;IMP] [GO:0007638 "mechanosensory behavior"
evidence=IGI] [GO:0048666 "neuron development" evidence=IGI]
[GO:0002119 "nematode larval development" evidence=IGI] [GO:0040011
"locomotion" evidence=IGI] [GO:0048644 "muscle organ morphogenesis"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0009792 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0048644 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011
GO:GO:0048666 HSSP:P16649 GO:GO:0007638 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:Z81490 EMBL:AF330595 PIR:T20276
RefSeq:NP_493279.1 UniGene:Cel.19360 ProteinModelPortal:G5EEG7
SMR:G5EEG7 IntAct:G5EEG7 EnsemblMetazoa:CC4.3 GeneID:173175
KEGG:cel:CELE_CC4.3 CTD:173175 WormBase:CC4.3 NextBio:878585
Uniprot:G5EEG7
Length = 510
Score = 137 (53.3 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 39/168 (23%), Positives = 78/168 (46%)
Query: 24 SVSFHPSGDFLLAGTDHPIAHLYD-VN-TFQCYLSANVPE--ISVNGAINQVRYSSTGGM 79
S F P ++L++G+ +++ +N + L + + ++ A+ + +S M
Sbjct: 219 SAVFSPDANYLVSGSKDGFIEVWNYMNGKLRKDLKYQAQDNLMMMDAAVRCISFSRDSEM 278
Query: 80 YVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVS 139
T S DG I++W + +C+R AH T + F+KD +LS G D V++ +
Sbjct: 279 LATGSIDGKIKVWKVETGDCLRRFDRAH-TKGVCAVRFSKDNSHILSGGNDHVVRVHGMK 337
Query: 140 SGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE 187
SG+ +K+ G H+ ++D ++S + I +W + E
Sbjct: 338 SGKCLKEMRG--HSSYITDVRYSDEGNHIISCSTDGS-IRVWHGKSGE 382
>UNIPROTKB|E1BGS8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:DAAA02009276 IPI:IPI00699437
ProteinModelPortal:E1BGS8 Ensembl:ENSBTAT00000005131 Uniprot:E1BGS8
Length = 623
Score = 138 (53.6 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 53/206 (25%), Positives = 92/206 (44%)
Query: 18 DTHN--VRSVSFHPSGDFLLA--GTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRY 73
D H+ V +V F P G LLA G D + L++V +C ++ N I + +
Sbjct: 335 DAHDGEVNAVQFSP-GSRLLATGGMDRRVK-LWEVFGDKCEFKGSLS--GSNAGITSIEF 390
Query: 74 SSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTV 133
S G + AS D A R+W V +R + H + + SA F D ++S D T+
Sbjct: 391 DSAGSYLLAASNDFASRIWT-VDDYRLRHTLTGH-SGKVLSAKFLLDNARIVSGSHDRTL 448
Query: 134 KLWEVSSGRLVKQ-YLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKW 192
KLW++ S +K + G++ + TE+ V+S +I WD + +E + +
Sbjct: 449 KLWDLRSKVCIKTVFAGSSCNDIVC------TEQCVMS-GHFDKKIRFWD-IRSESIVR- 499
Query: 193 SSNHIGAPRWIEHSPAEAAFITCGTD 218
+G ++ +P ++C D
Sbjct: 500 EMELLGKITALDLNPERTELLSCSRD 525
>UNIPROTKB|J3KNP2 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AC005606
GO:GO:0006364 GO:GO:0032040 EMBL:AC005363 HGNC:HGNC:11587
Ensembl:ENST00000332704 Uniprot:J3KNP2
Length = 697
Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 50/213 (23%), Positives = 90/213 (42%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEI-SVNGAI-------NQVRY 73
V S++F G +L+ I ++D+ + C + VP SV A+ +Q+
Sbjct: 106 VTSLAFSADGHTMLSSGRDKICIIWDLQS--CQATRTVPVFESVEAAVLLPEEPVSQLGV 163
Query: 74 SSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTA-EATSANFTKDQRFVLSCGKDST 132
S G ++TA G +R+W+ S CV + G E T VL+ D
Sbjct: 164 KSPGLYFLTAGDQGTLRVWEAASGQCVYTQAQPPGPGQELTHCTLAHTAGVVLTATADHN 223
Query: 133 VKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKW 192
+ L+E S RL KQ+ G + L + + + V++ + P + +++ T+ +
Sbjct: 224 LLLYEARSLRLQKQFAGYSEEVLDVRFLGPEDSHVVVASNSPC--LKVFELQTS--ACQI 279
Query: 193 SSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
H ++ F +C D+SVR W+
Sbjct: 280 LHGHTDIVLALDVFRKGWLFASCAKDQSVRIWR 312
>RGD|1306947 [details] [associations]
symbol:Wdr83 "WD repeat domain 83" species:10116 "Rattus
norvegicus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306947 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013
GO:GO:0000375 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V EMBL:AY940050 IPI:IPI00209921
RefSeq:NP_001041312.1 UniGene:Rn.3570 ProteinModelPortal:Q5BLX8
PRIDE:Q5BLX8 GeneID:288924 KEGG:rno:288924 InParanoid:Q5BLX8
NextBio:629000 Genevestigator:Q5BLX8 Uniprot:Q5BLX8
Length = 315
Score = 133 (51.9 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 35/117 (29%), Positives = 59/117 (50%)
Query: 66 GAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVL 125
GA+ VR++ G +T D ++LW+ + +R+ G HG E A + D +
Sbjct: 26 GAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSG-HGY-EVLDAAGSFDNSHLC 83
Query: 126 SCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWD 182
S G D TV LW+V++G++V+++ G H FN+ +LS S+ + WD
Sbjct: 84 SGGGDKTVVLWDVATGQVVRKFRG--HAGKVNTVQFNEEATVILSGSIDSS-VRCWD 137
Score = 133 (51.9 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 35/118 (29%), Positives = 53/118 (44%)
Query: 108 GTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEF 167
G + F D + L+CG D T+KLW G L++ Y G + L F+++
Sbjct: 24 GQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSH-- 81
Query: 168 VLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGT-DRSVRFW 224
L +V+WD T + V K+ H G ++ + EA I G+ D SVR W
Sbjct: 82 -LCSGGGDKTVVLWDVATGQVVRKFRG-HAGKVNTVQFNE-EATVILSGSIDSSVRCW 136
Score = 115 (45.5 bits), Expect = 0.00016, P = 0.00016
Identities = 46/227 (20%), Positives = 93/227 (40%)
Query: 2 FDFSKATAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPE 61
+D + R FR V +V F+ +L+G+ +D + + + E
Sbjct: 94 WDVATGQVVRKFR--GHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPEPVQTLDE 151
Query: 62 ISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
I+ V+ S + S DG +R +D VG+ T F++D
Sbjct: 152 --ARDGISSVKVSDHE--ILAGSVDGRVRRYDLRMGQVTSDYVGS----PITCTCFSRDG 203
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
+ L DST++L + +G L+ +Y+G + + + ++ + V+S E ++ W
Sbjct: 204 QCTLISSLDSTLRLLDKDTGELLGEYVGHKNQKYKLDCCLSERDTHVVSCSE-DGKVFFW 262
Query: 182 DALTAEKVAKW--SSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWKE 226
D + SN + + + + PA+ +T S+++W+E
Sbjct: 263 DLVEGSLALALPVGSNVVQS---LAYHPADPCLLTA-MGGSIQYWRE 305
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 133 (51.9 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 35/117 (29%), Positives = 59/117 (50%)
Query: 66 GAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVL 125
GA+ VR++ G +T D ++LW+ + +R+ G HG E A + D +
Sbjct: 26 GAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSG-HGY-EVLDAAGSFDNSHLC 83
Query: 126 SCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWD 182
S G D TV LW+V++G++V+++ G H FN+ +LS S+ + WD
Sbjct: 84 SGGGDKTVVLWDVATGQVVRKFRG--HAGKVNTVQFNEEATVILSGSIDSS-VRCWD 137
Score = 130 (50.8 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 34/112 (30%), Positives = 52/112 (46%)
Query: 114 SANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDE 173
+ F D + L+CG D T+KLW G L++ Y G + L F+++ L
Sbjct: 30 AVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSH---LCSGG 86
Query: 174 PSNEIVIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGT-DRSVRFW 224
+V+WD T + V K+ H G ++ + EA I G+ D SVR W
Sbjct: 87 GDKTVVLWDVATGQVVRKFRG-HAGKVNTVQFNE-EATVILSGSIDSSVRCW 136
Score = 116 (45.9 bits), Expect = 0.00012, P = 0.00012
Identities = 49/227 (21%), Positives = 95/227 (41%)
Query: 2 FDFSKATAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPE 61
+D + R FR V +V F+ +L+G+ +D + + + E
Sbjct: 94 WDVATGQVVRKFR--GHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPEPVQTLDE 151
Query: 62 ISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
I+ V+ S + S DG +R +D VG+ T F++D
Sbjct: 152 --ARDGISSVKVSDHE--ILAGSVDGRVRRYDLRMGQVSSDYVGS----PITCTCFSRDG 203
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
+ L DST++L + +G L+ +Y+G + Q + ++ + V+S E ++ W
Sbjct: 204 QCTLISSLDSTLRLLDKDTGELLGEYVGHKNQQYKLDCCLSERDTHVVSCSE-DGKVFFW 262
Query: 182 DALT-AEKVA-KWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWKE 226
D + A +A SN + + + + P E +T S+++W+E
Sbjct: 263 DLVEGALALALPVGSNVVQS---LAYHPTEPCLLTA-MGGSIQYWRE 305
>UNIPROTKB|O95170 [details] [associations]
symbol:CDRT1 "CMT1A duplicated region transcript 1 protein"
species:9606 "Homo sapiens" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:U43383 EMBL:U65652 EMBL:AF045592 EMBL:AF045588
EMBL:AF045589 EMBL:AF045590 EMBL:AF045591 EMBL:AC005324
EMBL:AC005838 IPI:IPI00796531 IPI:IPI00815659 RefSeq:NP_006373.2
UniGene:Hs.548021 UniGene:Hs.632233 ProteinModelPortal:O95170
SMR:O95170 STRING:O95170 PhosphoSite:O95170 PaxDb:O95170
PRIDE:O95170 DNASU:374286 Ensembl:ENST00000354433
Ensembl:ENST00000395906 GeneID:374286 KEGG:hsa:374286
UCSC:uc002gov.4 UCSC:uc010vvy.2 CTD:374286 GeneCards:GC17M015470
GeneCards:GC17M015478 HGNC:HGNC:14379 HPA:HPA013332 MIM:604596
neXtProt:NX_O95170 PharmGKB:PA134869447 HOGENOM:HOG000172165
InParanoid:O95170 OrthoDB:EOG480HWG GenomeRNAi:374286
NextBio:100140 Bgee:O95170 CleanEx:HS_CDRT1 Genevestigator:O95170
Uniprot:O95170
Length = 752
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 55/217 (25%), Positives = 93/217 (42%)
Query: 14 RVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVR- 72
R++ DT + V + GD + ++ I HL D+ + +P + G VR
Sbjct: 406 RILSDTWDQNRVIHYSGGDLIAVSSNRKI-HLLDIIQVKA-----IP-VEFRGHAGSVRA 458
Query: 73 --YSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKD 130
++ S D +IR WD S C R G GT T + K++ ++S G+D
Sbjct: 459 LFLCEEENFLLSGSYDLSIRYWDLKSGVCTRIFGGHQGTI--TCMDLCKNR--LVSGGRD 514
Query: 131 STVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVA 190
VK+W+V +G+ +K + H NDT +++S E + +W A+ V
Sbjct: 515 CQVKVWDVDTGKCLKTF---RHKDPILATRINDT--YIVSSCE-RGLVKVWHIAMAQLV- 567
Query: 191 KWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWKEI 227
K S H GA + + + ++ TD V W +
Sbjct: 568 KTLSGHEGAVKCLFFD--QWHLLSGSTDGLVMAWSMV 602
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 138 (53.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 50/213 (23%), Positives = 90/213 (42%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEI-SVNGAI-------NQVRY 73
V S++F G +L+ I ++D+ + C + VP SV A+ +Q+
Sbjct: 198 VTSLAFSADGHTMLSSGRDKICIIWDLQS--CQATRTVPVFESVEAAVLLPEEPVSQLGV 255
Query: 74 SSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTA-EATSANFTKDQRFVLSCGKDST 132
S G ++TA G +R+W+ S CV + G E T VL+ D
Sbjct: 256 KSPGLYFLTAGDQGTLRVWEAASGQCVYTQAQPPGPGQELTHCTLAHTAGVVLTATADHN 315
Query: 133 VKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKW 192
+ L+E S RL KQ+ G + L + + + V++ + P + +++ T+ +
Sbjct: 316 LLLYEARSLRLQKQFAGYSEEVLDVRFLGPEDSHVVVASNSPC--LKVFELQTS--ACQI 371
Query: 193 SSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
H ++ F +C D+SVR W+
Sbjct: 372 LHGHTDIVLALDVFRKGWLFASCAKDQSVRIWR 404
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 140 (54.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 49/175 (28%), Positives = 78/175 (44%)
Query: 24 SVSFHPSGDFLLAGTDHPIAHLYDV-NTFQCYLSANVPEISVNGAINQVRYSSTGGMYVT 82
SV+F P + AG ++D T Q L + P GAI + +S VT
Sbjct: 860 SVAFSPDSRQIAAGFKDGKIFIWDAAGTLQKTLERH-P-----GAIMSIAFSPDVKQLVT 913
Query: 83 ASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGR 142
S D I+ WD ++ V+ VG H + T+ + D + + S D T+KLW+ ++G
Sbjct: 914 CSTDSTIKRWD-ITIGGVQEAVG-H-SKHVTTMVLSPDGKVIASGSADKTIKLWDAATGD 970
Query: 143 LVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHI 197
L K G H + VF+ ++S S + IWDA T + + S+ +
Sbjct: 971 LQKTLTG--HLDTVEKVVFSLDNRQIVSCS--SEAVKIWDAATGKVQNSFESDDV 1021
Score = 136 (52.9 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 47/206 (22%), Positives = 94/206 (45%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T V SV+ G +++G+ + L+D T ++ + +G V +S
Sbjct: 816 TGTVLSVAISSDGRQIVSGSIEAVK-LWDAAT------GDLLKTLASGFAGSVAFSPDSR 868
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
KDG I +WD +A ++ + H A + A F+ D + +++C DST+K W++
Sbjct: 869 QIAAGFKDGKIFIWD--AAGTLQKTLERHPGAIMSIA-FSPDVKQLVTCSTDSTIKRWDI 925
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIG 198
+ G V++ +G H++ V + + + S I +WDA T + + K + H+
Sbjct: 926 TIGG-VQEAVG--HSKHVTTMVLSPDGKVIAS-GSADKTIKLWDAATGD-LQKTLTGHLD 980
Query: 199 APRWIEHSPAEAAFITCGTDRSVRFW 224
+ S ++C ++ +V+ W
Sbjct: 981 TVEKVVFSLDNRQIVSCSSE-AVKIW 1005
Score = 120 (47.3 bits), Expect = 0.00032, P = 0.00032
Identities = 58/231 (25%), Positives = 105/231 (45%)
Query: 10 KRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEIS-VNGAI 68
KR +++ Q+ V++++F P +++G L+D T A+ IS VN
Sbjct: 664 KRRYQIQQE--QVKAMAFLPDSKLIISGYYDGSVMLWDTTTGDRQEIADHFGISKVNYTY 721
Query: 69 ----NQVRYSSTGGMY------VTA---SKDGA-IRLWDGVSANCVRSIVGAHGTAEATS 114
Q Y G + + A S+D I L+D + + ++ I+ H + E ++
Sbjct: 722 LQPPEQGGYGLHAGAFSADCKQIAAFGWSRDSTCIMLFDTATGD-LQKILKGH-SHECST 779
Query: 115 ANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEP 174
F+ D R +++ D TV+LW ++G L K ++G T T L A+ +D + V E
Sbjct: 780 MAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSV-AISSDGRQIVSGSIEA 838
Query: 175 SNEIVIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCG-TDRSVRFW 224
+ +WDA T + + +S G+ + SP ++ I G D + W
Sbjct: 839 ---VKLWDAATGDLLKTLASGFAGS---VAFSP-DSRQIAAGFKDGKIFIW 882
>SGD|S000004951 [details] [associations]
symbol:LST8 "Protein required for the transport of Gap1p to
the cell surface" species:4932 "Saccharomyces cerevisiae"
[GO:0030950 "establishment or maintenance of actin cytoskeleton
polarity" evidence=IMP] [GO:0030295 "protein kinase activator
activity" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=IDA] [GO:0001558
"regulation of cell growth" evidence=IPI] [GO:0005774 "vacuolar
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IMP] [GO:0010008 "endosome membrane" evidence=IDA]
[GO:0000139 "Golgi membrane" evidence=IDA] [GO:0031505 "fungal-type
cell wall organization" evidence=IMP] [GO:0031929 "TOR signaling
cascade" evidence=IC;IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IMP] [GO:0031932
"TORC2 complex" evidence=IPI] [GO:0031931 "TORC1 complex"
evidence=IPI] [GO:0006810 "transport" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004951 GO:GO:0005774 GO:GO:0000139 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558
GO:GO:0031929 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BK006947 GO:GO:0030295 GO:GO:0010008
GO:GO:0031930 GO:GO:0031505 KO:K07034 GO:GO:0031931 GO:GO:0030950
RefSeq:NP_014399.3 GeneID:855736 KEGG:sce:YNR002C GO:GO:0031932
GO:GO:0031234 EMBL:X77114 RefSeq:NP_014392.3 GeneID:855726
KEGG:sce:YNL006W KO:K08266 GeneTree:ENSGT00390000014795
HOGENOM:HOG000208395 OMA:NNKGNCY EMBL:Z71282 PIR:S45461
ProteinModelPortal:P41318 SMR:P41318 DIP:DIP-5318N IntAct:P41318
MINT:MINT-562844 STRING:P41318 PaxDb:P41318 PeptideAtlas:P41318
EnsemblFungi:YNL006W CYGD:YNL006w OrthoDB:EOG4GF6PT NextBio:980099
Genevestigator:P41318 GermOnline:YNL006W Uniprot:P41318
Length = 303
Score = 132 (51.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 45/197 (22%), Positives = 79/197 (40%)
Query: 34 LLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTASKDGAIRLWD 93
LLA H LYD+ T A+ G + V + VT+S+DG I++WD
Sbjct: 46 LLATAGHQNVRLYDIRTTNPNPVASFE--GHRGNVTSVSFQQDNRWMVTSSEDGTIKVWD 103
Query: 94 GVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHT 153
S + R+ H A +Q ++SC +D +++W++ + Q T
Sbjct: 104 VRSPSIPRNY--KHN-APVNEVVIHPNQGELISCDRDGNIRIWDLGENQCTHQLTPEDDT 160
Query: 154 QLRFQAVFNDTEEFVLSIDEPSNEIVIW------DALTAEKVAKWSSNHIGAPRWIEHSP 207
L+ ++ +D +L+ +W DA + V K+ ++ R + S
Sbjct: 161 SLQSLSMASDGS--MLAAANTKGNCYVWEMPNHTDASHLKPVTKFRAHSTYITRILLSSD 218
Query: 208 AEAAFITCGTDRSVRFW 224
+ TC D + R W
Sbjct: 219 VKH-LATCSADHTARVW 234
Score = 122 (48.0 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 40/149 (26%), Positives = 70/149 (46%)
Query: 36 AGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTASKDGAIRLWD-- 93
AG DH I ++ T C S + + +N++ ++ + TA +RL+D
Sbjct: 8 AGYDHTI-RFWEALTGVC--SRTIQHS--DSQVNRLEITNDKKLLATAGHQN-VRLYDIR 61
Query: 94 GVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHT 153
+ N V S G G TS +F +D R++++ +D T+K+W+V S + + Y H
Sbjct: 62 TTNPNPVASFEGHRGNV--TSVSFQQDNRWMVTSSEDGTIKVWDVRSPSIPRNY---KHN 116
Query: 154 QLRFQAVFNDTEEFVLSIDEPSNEIVIWD 182
+ V + + ++S D N I IWD
Sbjct: 117 APVNEVVIHPNQGELISCDRDGN-IRIWD 144
Score = 116 (45.9 bits), Expect = 0.00011, P = 0.00011
Identities = 41/188 (21%), Positives = 80/188 (42%)
Query: 20 HN--VRSVSFHPS-GDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSST 76
HN V V HP+ G+ + D I ++D+ QC PE + + + +S
Sbjct: 115 HNAPVNEVVIHPNQGELISCDRDGNI-RIWDLGENQCTHQLT-PEDDTS--LQSLSMASD 170
Query: 77 GGMYVTASKDGAIRLWD---GVSANCVRSIVG--AHGTAEATSANFTKDQRFVLSCGKDS 131
G M A+ G +W+ A+ ++ + AH T T + D + + +C D
Sbjct: 171 GSMLAAANTKGNCYVWEMPNHTDASHLKPVTKFRAHSTY-ITRILLSSDVKHLATCSADH 229
Query: 132 TVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAK 191
T ++W + ++ L H + + F+ ++++ + + +WD T E V +
Sbjct: 230 TARVWSIDDDFKLETTLDG-HQRWVWDCAFSADSAYLVTASS-DHYVRLWDLSTREIVRQ 287
Query: 192 WSSNHIGA 199
+ +H GA
Sbjct: 288 YGGHHKGA 295
>MGI|MGI:2139593 [details] [associations]
symbol:Wdr47 "WD repeat domain 47" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:2139593 GO:GO:0007275 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0005874 EMBL:AL683823 EMBL:CH466607 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00550000074331
CTD:22911 HOGENOM:HOG000231412 HOVERGEN:HBG058798 EMBL:AK122397
EMBL:BC040337 IPI:IPI00330193 RefSeq:NP_852065.2 UniGene:Mm.285968
ProteinModelPortal:Q8CGF6 SMR:Q8CGF6 DIP:DIP-58945N
PhosphoSite:Q8CGF6 PaxDb:Q8CGF6 PRIDE:Q8CGF6
Ensembl:ENSMUST00000051145 GeneID:99512 KEGG:mmu:99512
InParanoid:A2AGC7 OMA:RVCAYPD OrthoDB:EOG4640B8 NextBio:353995
Bgee:Q8CGF6 CleanEx:MM_WDR47 Genevestigator:Q8CGF6
GermOnline:ENSMUSG00000040389 Uniprot:Q8CGF6
Length = 920
Score = 117 (46.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 42/159 (26%), Positives = 74/159 (46%)
Query: 73 YSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGA--HGTAEATSANFTKDQRFVLSCGK- 129
Y+ +G M + S+D +R WD +CVR +VG HGT A ++ +L+ G+
Sbjct: 763 YTWSGWMIASGSQDKTVRFWDLRVPSCVR-VVGTTFHGTGSAVASVAVDPSGRLLATGQE 821
Query: 130 DSTVKLWEVSSGRLVKQYL--GATHTQLRFQ--AVFNDTEEFVLSIDEPSNEIVIWDALT 185
DS+ L+++ GR+V+ Y + +RF A + T + + I + + L
Sbjct: 822 DSSCMLYDIRGGRMVQSYHPHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQGDLTKQLP 881
Query: 186 AEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
V + I RW H+ + +F++ DR+V W
Sbjct: 882 LMVVGEHKDKVIQC-RW--HTQ-DLSFLSSSADRTVTLW 916
Score = 65 (27.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 16 IQDTHNVRSVSFHPSGDFLLAGTD 39
++DT VR+V+FHPSG G++
Sbjct: 604 LEDTQAVRAVAFHPSGSLYAVGSN 627
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 134 (52.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 39/169 (23%), Positives = 77/169 (45%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNT--FQCYLSANVPEISVNGAINQVRYSSTGGM 79
V V FHP +++ ++ ++D T F+ L + ++ + + TG +
Sbjct: 111 VTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTD------SVQDISFDHTGKL 164
Query: 80 YVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVS 139
+ S D I+LWD C+R++ G H +S + ++S +D T+K+WEV+
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHG-HDH-NVSSVAIMPNGDHIVSASRDKTIKMWEVA 222
Query: 140 SGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIV-IWDALTAE 187
+G VK + G H + + + ++ L +++ V +W T E
Sbjct: 223 TGYCVKTFTG--HRE--WVRMVRPNQDGTLIASSSNDQTVRVWVVATKE 267
Score = 119 (46.9 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 52/221 (23%), Positives = 98/221 (44%)
Query: 20 HNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSAN-----VPEISVNGAINQVRYS 74
HNV SV+ P+GD +++ + +++V T C + V + N + S
Sbjct: 193 HNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASS 252
Query: 75 S---TGGMYVTASKD--GAIRLWDGVSANCVR-SIVGAHGTA-EATSANFTKDQR---FV 124
S T ++V A+K+ +R + V C+ + AH T EAT + K + F+
Sbjct: 253 SNDQTVRVWVVATKECKAELREHEHV-VECISWAPESAHPTILEATGSETKKSGKPGPFL 311
Query: 125 LSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDAL 184
LS +D T+K+W+VS G + +G H + + ++++S + + IWD
Sbjct: 312 LSGSRDKTIKMWDVSIGMCLMTLVG--HDNWVRGVLVHPGGKYIVSCADDKT-LRIWDYK 368
Query: 185 TAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
++ K S H ++ +T D++V+ W+
Sbjct: 369 N-KRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 117 (46.2 bits), Expect = 0.00015, P = 0.00015
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T +V+ +SF +G L + + L+D F+C + + + +V+ V G
Sbjct: 150 TDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS----VAIMPNGD 205
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
V+AS+D I++W+ + CV++ G N +D + S D TV++W V
Sbjct: 206 HIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPN--QDGTLIASSSNDQTVRVWVV 263
Query: 139 SS 140
++
Sbjct: 264 AT 265
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 37/127 (29%), Positives = 67/127 (52%)
Query: 63 SVNGAINQVRYSSTGGMYVTA-SKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
++ G N+V G++V + S D +IR+WD + NC+ ++ G H + TS KD
Sbjct: 458 TLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTG-HQSL--TSGMELKDN 514
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAV-FNDTEEFVLSIDEPSNEIVI 180
++S DSTVK+W++ +G+ ++ G + Q + FN + FV++ + + +
Sbjct: 515 -ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFN--KNFVITSSDDGT-VKL 570
Query: 181 WDALTAE 187
WD T E
Sbjct: 571 WDLKTGE 577
Score = 128 (50.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 48/208 (23%), Positives = 91/208 (43%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T VR + H +++G+ ++D+ T QC L + ++ A+ V+Y G
Sbjct: 383 TSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQC-LHVLMGHVA---AVRCVQYD--GR 434
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
V+ + D +++WD + C+ ++ G H T S F D V+S D+++++W+V
Sbjct: 435 RVVSGAYDFMVKVWDPETETCLHTLQG-H-TNRVYSLQF--DGIHVVSGSLDTSIRVWDV 490
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE--KVAKWSSNH 196
+G + G H L D +L + + IWD T + + + S H
Sbjct: 491 ETGNCIHTLTG--HQSLTSGMELKDN---ILVSGNADSTVKIWDIKTGQCLQTLQGPSKH 545
Query: 197 IGAPRWIEHSPAEAAFITCGTDRSVRFW 224
A ++ + + IT D +V+ W
Sbjct: 546 QSAVTCLQFN--KNFVITSSDDGTVKLW 571
Score = 113 (44.8 bits), Expect = 0.00075, P = 0.00075
Identities = 36/148 (24%), Positives = 68/148 (45%)
Query: 77 GGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLW 136
G V+ S D +++W V+ C+R++VG H T S+ +D ++S D T+K+W
Sbjct: 313 GNRIVSGSDDNTLKVWSAVTGKCLRTLVG-H-TGGVWSSQM-RDN-IIISGSTDRTLKVW 368
Query: 137 EVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNH 196
+G + G T T +R + E+ V+S + + +WD T + + H
Sbjct: 369 NAETGECIHTLYGHTST-VRCMHLH---EKRVVSGSRDAT-LRVWDIETGQCLHVLMG-H 422
Query: 197 IGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+ A R +++ ++ D V+ W
Sbjct: 423 VAAVRCVQYDGRRV--VSGAYDFMVKVW 448
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 132 (51.5 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 28/111 (25%), Positives = 54/111 (48%)
Query: 114 SANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDE 173
+ F D ++L+CG D ++KLW VS G L+K Y G + L +++++ S D+
Sbjct: 30 AVRFNADGNYLLTCGSDKSLKLWSVSRGTLLKTYSGHGYEVLDADGSYDNSQLCSCSSDK 89
Query: 174 PSNEIVIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+++WD + + V + H G ++ + ++ D +VR W
Sbjct: 90 T---VILWDVASGQ-VTRKLRGHAGKVNCVQFNEEATVMLSGSIDGTVRCW 136
Score = 131 (51.2 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 34/117 (29%), Positives = 55/117 (47%)
Query: 66 GAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVL 125
GA+ VR+++ G +T D +++LW VS + HG E A+ + D +
Sbjct: 26 GAVRAVRFNADGNYLLTCGSDKSLKLWS-VSRGTLLKTYSGHGY-EVLDADGSYDNSQLC 83
Query: 126 SCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWD 182
SC D TV LW+V+SG++ ++ G H FN+ +LS + WD
Sbjct: 84 SCSSDKTVILWDVASGQVTRKLRG--HAGKVNCVQFNEEATVMLS-GSIDGTVRCWD 137
Score = 111 (44.1 bits), Expect = 0.00048, P = 0.00048
Identities = 45/203 (22%), Positives = 82/203 (40%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYV 81
V V F+ +L+G+ +D + + + + S +G I+ ++ S +
Sbjct: 112 VNCVQFNEEATVMLSGSIDGTVRCWDTRSRRME-PIQILDESQDG-ISSLKVSEHE--LL 167
Query: 82 TASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSG 141
T S DG +R +D +G+ T F++D + LS DSTV+L + S+G
Sbjct: 168 TGSVDGRVRRYDLRMGQLQVDYIGS----PITCVCFSRDGQCTLSSSLDSTVRLLDKSTG 223
Query: 142 RLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPR 201
++ +Y G + + D + VLS E + + WD + K +
Sbjct: 224 EMLGEYSGHVNKGYKLDCCLTDKDTHVLSCSEDGH-VYYWDLVEGSLTLKLPVGK-AVVQ 281
Query: 202 WIEHSPAEAAFITCGTDRSVRFW 224
+ P E +T R V+ W
Sbjct: 282 SLSFHPTEPRLLTSMEGR-VQVW 303
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 132 (51.5 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 46/176 (26%), Positives = 77/176 (43%)
Query: 59 VPEISVNGA---INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSA 115
+P+ ++ G ++ V SS G ++ S DG +RLWD + R VG H T + S
Sbjct: 54 IPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVG-H-TKDVLSV 111
Query: 116 NFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQ----LRFQAVFNDTEEFVLSI 171
F+ D R ++S +D T+KLW + G +HT+ +RF N + ++S
Sbjct: 112 AFSADNRQIVSGSRDKTIKLWN-TLGVCKYTIQDDSHTEWVSCVRFSP--NSSNPIIVSC 168
Query: 172 DEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIEH---SPAEAAFITCGTDRSVRFW 224
+ +W+ K +NHIG ++ SP + + G D W
Sbjct: 169 GW-DKMVKVWNLANC----KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLW 219
Score = 119 (46.9 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 34/152 (22%), Positives = 67/152 (44%)
Query: 79 MYVTASKDGAIRLW----DGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVK 134
M ++AS+D I +W D + + + H + + D +F LS D T++
Sbjct: 30 MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHF-VSDVVISSDGQFALSGSWDGTLR 88
Query: 135 LWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSS 194
LW++++G ++++G HT+ F+ ++S I +W+ L K
Sbjct: 89 LWDLTTGTTTRRFVG--HTKDVLSVAFSADNRQIVS-GSRDKTIKLWNTLGVCKYTIQDD 145
Query: 195 NHIGAPRWIEHSP--AEAAFITCGTDRSVRFW 224
+H + SP + ++CG D+ V+ W
Sbjct: 146 SHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVW 177
>UNIPROTKB|E1BL00 [details] [associations]
symbol:PWP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 KO:K14558 OMA:VWQCDTP
InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 CTD:5822 EMBL:DAAA02003485 IPI:IPI00686265
RefSeq:XP_002685190.1 RefSeq:XP_592170.3 ProteinModelPortal:E1BL00
Ensembl:ENSBTAT00000009343 GeneID:514336 KEGG:bta:514336
NextBio:20871282 Uniprot:E1BL00
Length = 919
Score = 138 (53.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 50/209 (23%), Positives = 89/209 (42%)
Query: 16 IQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSS 75
I D V SV+ + SGD++ G + L V +Q + N ++ + YS
Sbjct: 326 ISD-QRVASVAINSSGDWIAFGCSG-LGQLL-VWEWQSESYVLKQQGHFNSMVS-LAYSP 381
Query: 76 TGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKL 135
G VT DG +++W+ +S C + H + T FT +++ D TV+
Sbjct: 382 DGQYIVTGGDDGKVKVWNSLSGFCFVTFT-EHSSG-VTGVTFTTTGYVIVTSSMDGTVRA 439
Query: 136 WEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSN 195
+++ R + + TQ AV + + E V + + S E+ IW T ++ S
Sbjct: 440 FDLHRYRNFRTFTSPRPTQFSCVAV-DSSGEIVSAGAQDSFEVFIWSMQTG-RLLDVLSG 497
Query: 196 HIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
H G + +P ++ + DR+V W
Sbjct: 498 HEGPISGLCFNPMKSVLASASWDRTVHLW 526
>MGI|MGI:1341200 [details] [associations]
symbol:Pwp2 "PWP2 periodic tryptophan protein homolog
(yeast)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1341200 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 CTD:5822 HOVERGEN:HBG030681
OrthoDB:EOG4R7V93 EMBL:AK088254 EMBL:AK088983 IPI:IPI00469755
RefSeq:NP_083822.1 RefSeq:XP_003946476.1 UniGene:Mm.103522
ProteinModelPortal:Q8BU03 SMR:Q8BU03 STRING:Q8BU03
PhosphoSite:Q8BU03 PRIDE:Q8BU03 Ensembl:ENSMUST00000042556
GeneID:110816 KEGG:mmu:110816 InParanoid:Q8BU03 ChiTaRS:PWP2
NextBio:364713 Bgee:Q8BU03 CleanEx:MM_PWP2 Genevestigator:Q8BU03
GermOnline:ENSMUSG00000032834 Uniprot:Q8BU03
Length = 919
Score = 138 (53.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 50/209 (23%), Positives = 90/209 (43%)
Query: 16 IQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSS 75
I D V SV+ + SGD++ G + L V +Q + N + + YS
Sbjct: 328 ISD-QRVASVAINSSGDWIAFGCSG-MGQLL-VWEWQSESYVLKQQGHFNSMV-ALAYSP 383
Query: 76 TGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKL 135
G VT DG +++W+ +S C ++ H + T FT +++ D TV+
Sbjct: 384 DGQYIVTGGDDGKVKVWNTLSGFCFVTLT-EHSSG-VTGVTFTTTGHVIVTSSLDGTVRA 441
Query: 136 WEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSN 195
+++ R + + TQ AV + + E V + + S EI +W T ++ S
Sbjct: 442 FDLHRYRNFRTFTSPRPTQFSCVAV-DSSGEIVSAGAQDSFEIFVWSMQTG-RLLDVLSG 499
Query: 196 HIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
H G + +P ++ + D++VR W
Sbjct: 500 HEGPVSGLCFNPMKSILASASWDKTVRLW 528
>FB|FBgn0035724 [details] [associations]
symbol:CG10064 species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 EMBL:AY089248 ProteinModelPortal:Q8T4D0
SMR:Q8T4D0 STRING:Q8T4D0 PaxDb:Q8T4D0 PRIDE:Q8T4D0
FlyBase:FBgn0035724 InParanoid:Q8T4D0 OrthoDB:EOG4547DW
ArrayExpress:Q8T4D0 Bgee:Q8T4D0 Uniprot:Q8T4D0
Length = 742
Score = 137 (53.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 45/223 (20%), Positives = 100/223 (44%)
Query: 4 FSKATAKRAFRVIQDTHN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPE 61
F+ T + + I + HN +++ SG ++ G ++ ++ ++ L + +
Sbjct: 436 FTPITGRLIY-AIPNAHNKGCSALAVASSGRLIVTGGIEGQVRVWKIDPYRQDLVGVLKD 494
Query: 62 ISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
S G I + + ++A DG+ +WD + + +V A+ + SA++
Sbjct: 495 HS--GPITSLDINYLDTEVISACTDGSCVIWD-IKRMTRKQVVTAN--TQFMSASYFPTG 549
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
V++CG D + W V +G L+++ + + + A+ N+T ++ +++ ++ +W
Sbjct: 550 VQVITCGSDGRIIYWMVYNGALIRELTASKKSSVNCLAI-NETGDYFITVGSDL-QVKLW 607
Query: 182 DALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
D + V S H + +SP F+T TD S+ W
Sbjct: 608 D-YNSGAVVGIGSEHASSVISCAYSPCMTMFVTGSTDGSLIIW 649
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 135 (52.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 48/225 (21%), Positives = 92/225 (40%)
Query: 14 RVIQDTHN----VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVN-GAI 68
+VI+ H V +++ HP+ D L+ G +A ++D+ T +N+ +S + G +
Sbjct: 276 KVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGVARVWDMRT-----RSNIHVLSGHTGTV 330
Query: 69 NQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCG 128
+++ +T S D +R+WD ++A ++ H + A T F + G
Sbjct: 331 SELVCQEADPQVITGSLDSTVRMWD-LAAGKTMGVLTHH--KKGVRALATHPTEFTFASG 387
Query: 129 KDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEK 188
++K W+ G ++ + G H + ND F D S + WD T +
Sbjct: 388 SAGSIKQWKCPEGAFMQNFEG--HNSIINTLSVNDQNVFFSGADNGS--MSFWDWKTGHR 443
Query: 189 VAKWSSNHIGAPRWIEHSPAEAAF------ITCG-TDRSVRFWKE 226
+ E + F + CG D++++ WKE
Sbjct: 444 FQSLDTTAQPGSLQAESGIFTSTFDQSGSRLICGEADKTIKIWKE 488
Score = 113 (44.8 bits), Expect = 0.00062, P = 0.00062
Identities = 32/145 (22%), Positives = 59/145 (40%)
Query: 80 YVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVS 139
+ + + D I++WD S ++ G T + + ++ SC +D VK W++
Sbjct: 216 FASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAVS--PRHPYLFSCAEDKMVKCWDLE 273
Query: 140 SGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGA 199
+ ++++ Y G H + + T + VL +WD T + S H G
Sbjct: 274 TNKVIRHYHG--HLSGVYTLALHPTLD-VLVTGGRDGVARVWDMRTRSNIHVLSG-HTGT 329
Query: 200 PRWIEHSPAEAAFITCGTDRSVRFW 224
+ A+ IT D +VR W
Sbjct: 330 VSELVCQEADPQVITGSLDSTVRMW 354
>UNIPROTKB|H0Y626 [details] [associations]
symbol:H0Y626 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR000315
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00643 PROSITE:PS50082 PROSITE:PS50119
PROSITE:PS50294 SMART:SM00320 SMART:SM00336 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 InterPro:IPR008985 SUPFAM:SSF49899
InterPro:IPR006574 SMART:SM00589 EMBL:AC005324 EMBL:AC005838
ProteinModelPortal:H0Y626 Ensembl:ENST00000455584 Uniprot:H0Y626
Length = 953
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 55/217 (25%), Positives = 93/217 (42%)
Query: 14 RVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVR- 72
R++ DT + V + GD + ++ I HL D+ + +P + G VR
Sbjct: 716 RILSDTWDQNRVIHYSGGDLIAVSSNRKI-HLLDIIQVKA-----IP-VEFRGHAGSVRA 768
Query: 73 --YSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKD 130
++ S D +IR WD S C R G GT T + K++ ++S G+D
Sbjct: 769 LFLCEEENFLLSGSYDLSIRYWDLKSGVCTRIFGGHQGTI--TCMDLCKNR--LVSGGRD 824
Query: 131 STVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVA 190
VK+W+V +G+ +K + H NDT +++S E + +W A+ V
Sbjct: 825 CQVKVWDVDTGKCLKTF---RHKDPILATRINDT--YIVSSCE-RGLVKVWHIAMAQLV- 877
Query: 191 KWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWKEI 227
K S H GA + + + ++ TD V W +
Sbjct: 878 KTLSGHEGAVKCLFFD--QWHLLSGSTDGLVMAWSMV 912
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 136 (52.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 37/127 (29%), Positives = 67/127 (52%)
Query: 63 SVNGAINQVRYSSTGGMYVTA-SKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
++ G N+V G++V + S D +IR+WD + NC+ ++ G H + TS KD
Sbjct: 458 TLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTG-HQSL--TSGMELKDN 514
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAV-FNDTEEFVLSIDEPSNEIVI 180
++S DSTVK+W++ +G+ ++ G + Q + FN + FV++ + + +
Sbjct: 515 -ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFN--KNFVITSSDDGT-VKL 570
Query: 181 WDALTAE 187
WD T E
Sbjct: 571 WDLKTGE 577
Score = 128 (50.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 48/208 (23%), Positives = 91/208 (43%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T VR + H +++G+ ++D+ T QC L + ++ A+ V+Y G
Sbjct: 383 TSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQC-LHVLMGHVA---AVRCVQYD--GR 434
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
V+ + D +++WD + C+ ++ G H T S F D V+S D+++++W+V
Sbjct: 435 RVVSGAYDFMVKVWDPETETCLHTLQG-H-TNRVYSLQF--DGIHVVSGSLDTSIRVWDV 490
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE--KVAKWSSNH 196
+G + G H L D +L + + IWD T + + + S H
Sbjct: 491 ETGNCIHTLTG--HQSLTSGMELKDN---ILVSGNADSTVKIWDIKTGQCLQTLQGPSKH 545
Query: 197 IGAPRWIEHSPAEAAFITCGTDRSVRFW 224
A ++ + + IT D +V+ W
Sbjct: 546 QSAVTCLQFN--KNFVITSSDDGTVKLW 571
Score = 113 (44.8 bits), Expect = 0.00082, P = 0.00082
Identities = 36/148 (24%), Positives = 68/148 (45%)
Query: 77 GGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLW 136
G V+ S D +++W V+ C+R++VG H T S+ +D ++S D T+K+W
Sbjct: 313 GNRIVSGSDDNTLKVWSAVTGKCLRTLVG-H-TGGVWSSQM-RDN-IIISGSTDRTLKVW 368
Query: 137 EVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNH 196
+G + G T T +R + E+ V+S + + +WD T + + H
Sbjct: 369 NAETGECIHTLYGHTST-VRCMHLH---EKRVVSGSRDAT-LRVWDIETGQCLHVLMG-H 422
Query: 197 IGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+ A R +++ ++ D V+ W
Sbjct: 423 VAAVRCVQYDGRRV--VSGAYDFMVKVW 448
>TAIR|locus:2172432 [details] [associations]
symbol:AT5G43920 "AT5G43920" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006703
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 EMBL:EF601122 EMBL:AK227235 IPI:IPI00548878
RefSeq:NP_199205.1 UniGene:At.26347 ProteinModelPortal:Q9FND4
SMR:Q9FND4 STRING:Q9FND4 PRIDE:Q9FND4 ProMEX:Q9FND4
EnsemblPlants:AT5G43920.1 GeneID:834414 KEGG:ath:AT5G43920
TAIR:At5g43920 InParanoid:Q9FND4 OMA:SSCAWFP PhylomeDB:Q9FND4
ProtClustDB:CLSN2686863 Genevestigator:Q9FND4 Uniprot:Q9FND4
Length = 523
Score = 135 (52.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 38/156 (24%), Positives = 71/156 (45%)
Query: 71 VRYSSTGGMYVTASKDGAIRLWDGVSANCV--RSIVGAHGTAEATSANFTKDQRFVLSCG 128
V++S++G TAS D +W + N V + + +H + +++ D +L+CG
Sbjct: 230 VQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNP-VSFVSWSPDDTKLLTCG 288
Query: 129 KDSTVKLWEVSSGRLVKQYLGATHTQLRFQ--AVFNDTEEFVLSIDEPSNEIVIWDALTA 186
+KLW+V +G +++ G +T A F D+ V +P IV+WD
Sbjct: 289 NAEVLKLWDVDTG-VLRHTFGNNNTGFTVSSCAWFPDSTRLVCGSSDPERGIVMWDT-DG 346
Query: 187 EKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVR 222
++ W I + +P + IT +D+ +R
Sbjct: 347 NEIKAWRGTRIPKVVDLAVTPDGESMITVFSDKEIR 382
>SGD|S000005795 [details] [associations]
symbol:PAC1 "Involved in nuclear migration, part of the
dynein/dynactin pathway" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IDA] [GO:0051010
"microtubule plus-end binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0030473 "nuclear migration along microtubule" evidence=IMP]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SGD:S000005795 GO:GO:0005634
EMBL:BK006948 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000922 GO:GO:0030473
GO:GO:0005881 GO:GO:0051010 EMBL:X89633 HAMAP:MF_03141
InterPro:IPR017252 PIRSF:PIRSF037647 OrthoDB:EOG4SR15V EMBL:U16827
EMBL:Z75177 PIR:S67166 RefSeq:NP_014912.1 ProteinModelPortal:P39946
SMR:P39946 DIP:DIP-1485N IntAct:P39946 MINT:MINT-399947
STRING:P39946 EnsemblFungi:YOR269W GeneID:854443 KEGG:sce:YOR269W
CYGD:YOR269w OMA:YEAGDFE NextBio:976691 Genevestigator:P39946
GermOnline:YOR269W Uniprot:P39946
Length = 494
Score = 129 (50.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 55/214 (25%), Positives = 93/214 (43%)
Query: 21 NVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQ---CYLSANVPEI-SVNGAINQVRYSST 76
+V SV HP+ + TDH + +D+ + L ++ I S++ SS
Sbjct: 157 SVTSVKLHPNLPIVFVATDHGKLYAFDLFNYTIPLASLQSHTKAITSMDVLFTNYTNSSK 216
Query: 77 GG--MYVTASKDGAIRLWDGVSANC----VRSIVGAHGTAEATSANFTKDQRFVLSCGKD 130
+ VTASKD I ++ VS C +RS++G A + + SC +D
Sbjct: 217 KNYLVIVTASKDLQIHVFKWVSEECKFQQIRSLLGHEHIVSAVKIWQKNNDVHIASCSRD 276
Query: 131 STVKLWEVSSGRLVKQYLGATHTQ-LRFQAVFNDTEEFVLSIDEPSN-EIVIW---DALT 185
TVK+W+ +G +K + H+Q +R V D +++S + + W + L+
Sbjct: 277 QTVKIWDFHNGWSLKTF--QPHSQWVRSIDVLGD---YIISGSHDTTLRLTHWPSGNGLS 331
Query: 186 AEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDR 219
++ + +IE SP E F T TDR
Sbjct: 332 VGTGHEFPIEKVKFIHFIEDSP-EIRFRTPSTDR 364
Score = 43 (20.2 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 202 WIEHSPAEAAFI-TCGTDRSVRFW 224
W+ ++ +C D+SVR W
Sbjct: 419 WVRDISIRGQYLFSCADDKSVRCW 442
>WB|WBGene00013143 [details] [associations]
symbol:Y53C12B.1 species:6239 "Caenorhabditis elegans"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0007126 "meiosis"
evidence=IMP] [GO:0045132 "meiotic chromosome segregation"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045132 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:Z99278 KO:K14555 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 PIR:T27133 RefSeq:NP_496100.1
UniGene:Cel.13957 ProteinModelPortal:O18215 SMR:O18215
STRING:O18215 PaxDb:O18215 EnsemblMetazoa:Y53C12B.1 GeneID:190203
KEGG:cel:CELE_Y53C12B.1 UCSC:Y53C12B.1 CTD:190203
WormBase:Y53C12B.1 HOGENOM:HOG000016188 InParanoid:O18215
NextBio:944956 Uniprot:O18215
Length = 793
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 39/162 (24%), Positives = 68/162 (41%)
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGA-HGTAEATS-ANFTKDQRFVL 125
+N V S + + T D ++LW + I G G F K+ +
Sbjct: 480 VNCVDISESDALIATGGMDKLVKLWQVDTHKMQLGIAGTLSGHRRGVGDVKFAKNSHKLA 539
Query: 126 SCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALT 185
SC D T+K+W +S ++ G H+ F+ +F + ++S D + I IW T
Sbjct: 540 SCSGDMTIKIWNISEKSCLQTISG--HSCAVFRVIFARNDSQLISADS-AGIIKIWTIKT 596
Query: 186 AEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWKEI 227
A+ + H + + E+ F+T GTD + WK++
Sbjct: 597 ADCECSIDA-HTDKIWSLSKNHNESEFVTAGTDGRIVVWKDV 637
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 49/212 (23%), Positives = 90/212 (42%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAI-------NQVRYS 74
V S++F G +L+ I ++D+ + Q + V E SV A+ ++
Sbjct: 198 VTSLTFSADGHTMLSSGRDKICVIWDLRSLQATRTVPVFE-SVEAAVLLPEEPAPELGVK 256
Query: 75 STGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTA-EATSANFTKDQRFVLSCGKDSTV 133
S G ++TA GA+R+W+ S CV + G E T +LS D +
Sbjct: 257 SAGLHFLTAGDQGALRVWEAASGRCVHAQQRLRGPGRELTHCTLAHAAGLLLSVTADHNL 316
Query: 134 KLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWS 193
L++ S RL KQ+ G + L + + + V++ + P + ++D T+ +
Sbjct: 317 LLYDAHSLRLRKQFAGYSEEVLDVRFLGPEDSHVVVASNSPC--LKVFDLQTS--ACQIL 372
Query: 194 SNHIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
H ++ F +C D+S+R W+
Sbjct: 373 HGHTDIVLALDVFRKGRLFASCAKDQSIRVWR 404
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 49/212 (23%), Positives = 90/212 (42%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAI-------NQVRYS 74
V S++F G +L+ I ++D+ + Q + V E SV A+ ++
Sbjct: 198 VTSLTFSADGHTMLSSGRDKICVIWDLRSLQATRTVPVFE-SVEAAVLLPEEPAPELGVK 256
Query: 75 STGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTA-EATSANFTKDQRFVLSCGKDSTV 133
S G ++TA GA+R+W+ S CV + G E T +LS D +
Sbjct: 257 SAGLHFLTAGDQGALRVWEAASGRCVHAQQRLRGPGRELTHCTLAHAAGLLLSVTADHNL 316
Query: 134 KLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWS 193
L++ S RL KQ+ G + L + + + V++ + P + ++D T+ +
Sbjct: 317 LLYDARSLRLRKQFAGYSEEVLDVRFLGPEDSHVVVASNSPC--LKVFDLQTS--ACQIL 372
Query: 194 SNHIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
H ++ F +C D+S+R W+
Sbjct: 373 HGHTDIVLALDVFRKGRLFASCAKDQSIRVWR 404
>POMBASE|SPAC144.13c [details] [associations]
symbol:srw1 "CDK inhibitor Srw1" species:4896
"Schizosaccharomyces pombe" [GO:0000750 "pheromone-dependent signal
transduction involved in conjugation with cellular fusion"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0007092 "activation of
mitotic anaphase-promoting complex activity" evidence=TAS]
[GO:0008054 "cyclin catabolic process" evidence=IMP] [GO:0030996
"cell cycle arrest in response to nitrogen starvation"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC144.13c GO:GO:0005634
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0000750 GO:GO:0008054
GO:GO:0007092 GO:GO:0045736 GO:GO:0031137 HOGENOM:HOG000195514
KO:K03364 OrthoDB:EOG43FM5B GO:GO:0030996 EMBL:AB005589
EMBL:AB001285 PIR:T37680 RefSeq:NP_594674.1
ProteinModelPortal:O13286 STRING:O13286 EnsemblFungi:SPAC144.13c.1
GeneID:2542824 KEGG:spo:SPAC144.13c OMA:PMATANL NextBio:20803866
Uniprot:O13286
Length = 556
Score = 135 (52.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 56/228 (24%), Positives = 98/228 (42%)
Query: 7 ATAKRAFRVIQDTHNVRSVSFHPSGDFLLA--GTDHPIAHLYDVNTFQCY---LSANVPE 61
AT K+ + T V ++S++ D +L+ G D+ I H DV + Y L+A+ E
Sbjct: 321 ATCKKTRTMSGHTERVGALSWN---DHVLSSGGRDNHILHR-DVRAPEHYFRVLTAHRQE 376
Query: 62 ISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSA-NFTKD 120
+ G + ++S + + D A+ +WD + S H A A ++
Sbjct: 377 VC--G----LEWNSNENLLASGGNDNALMVWDKFEEKPLYSF---HNHIAAVKAITWSPH 427
Query: 121 QRFVLSCG---KDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNE 177
QR +L+ G D T+KLW G ++ T +Q+ T EF+ + NE
Sbjct: 428 QRGILASGGGTADRTIKLWNTQRGSMLHNI--DTGSQVCNLLWSKQTNEFISTHGFMENE 485
Query: 178 IVIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
+ +W+ + +V H ++ SP +T D ++RFWK
Sbjct: 486 VALWNYPSVSRVGTLKG-HTDRVLYLAMSPNGENIVTGAADETLRFWK 532
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 133 (51.9 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 33/130 (25%), Positives = 61/130 (46%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNT--FQCYLSANVPEISVNGAINQVRYSSTGGM 79
V V FHP +++ ++ ++D T F+ L + ++ + + TG +
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD------SVQDISFDHTGKL 164
Query: 80 YVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVS 139
+ S D I+LWD C+R++ G H +S + ++S +D T+K+WEV
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHG-HDH-NVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 140 SGRLVKQYLG 149
+G VK + G
Sbjct: 223 TGYCVKTFTG 232
Score = 128 (50.1 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 36/157 (22%), Positives = 70/157 (44%)
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
+ +V + + V+AS+D I++WD + + R++ G H T +F + + SC
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG-H-TDSVQDISFDHTGKLLASC 168
Query: 128 GKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE 187
D T+KLW+ ++ G H + A+ + + V + + + I +W+ T
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHN-VSSVAIMPNGDHIVSASRDKT--IKMWEVQTGY 225
Query: 188 KVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
V K + H R + + +C D++VR W
Sbjct: 226 CV-KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 127 (49.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 50/221 (22%), Positives = 100/221 (45%)
Query: 20 HNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSAN-----VPEISVN--GA-INQV 71
HNV SV+ P+GD +++ + +++V T C + V + N G I
Sbjct: 193 HNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASC 252
Query: 72 RYSSTGGMYVTASKD--GAIRLWDGVSANCVR-SIVGAHGT-AEATSANFTKDQR---FV 124
T ++V A+K+ +R + V C+ + ++ T +EAT + K + F+
Sbjct: 253 SNDQTVRVWVVATKECKAELREHEHV-VECISWAPESSYSTISEATGSETKKSGKPGPFL 311
Query: 125 LSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDAL 184
LS +D T+K+W++S+G + +G H +F+ +F+LS + + +WD
Sbjct: 312 LSGSRDKTIKMWDISTGMCLMTLVG--HDNWVRGVLFHSGGKFILSCADDKT-LRVWD-F 367
Query: 185 TAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
++ K + H ++ +T D++V+ W+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 125 (49.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 31/122 (25%), Positives = 58/122 (47%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T +V+ +SF +G L + + L+D F+C + + + +V+ V G
Sbjct: 150 TDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS----VAIMPNGD 205
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
V+AS+D I++W+ + CV++ G N +D + SC D TV++W V
Sbjct: 206 HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN--QDGTLIASCSNDQTVRVWVV 263
Query: 139 SS 140
++
Sbjct: 264 AT 265
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 135 (52.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 32/115 (27%), Positives = 54/115 (46%)
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
++ V++ T S D +RLW N VR G G + F+ + ++++S
Sbjct: 426 VDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLA--FSPNGQYLVSA 483
Query: 128 GKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWD 182
G+D +KLW+++SG L K G HT F+ + V++ N + IWD
Sbjct: 484 GEDQLLKLWDLASGTLYKDLHG--HTDDITSVTFS-LDSSVIASASMDNSVRIWD 535
Score = 124 (48.7 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 31/121 (25%), Positives = 55/121 (45%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVN--GAINQVRYSSTGGM 79
V V FHP+ ++L G+ L+ N + G + + +S G
Sbjct: 426 VDCVKFHPNSNYLATGSTDKTVRLWSAQ------QGNSVRLFTGHCGPVRCLAFSPNGQY 479
Query: 80 YVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVS 139
V+A +D ++LWD S + + G H T + TS F+ D + S D++V++W++
Sbjct: 480 LVSAGEDQLLKLWDLASGTLYKDLHG-H-TDDITSVTFSLDSSVIASASMDNSVRIWDIK 537
Query: 140 S 140
S
Sbjct: 538 S 538
>UNIPROTKB|E2RRL3 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 CTD:84292 KO:K13124
OMA:CKQGAVR EMBL:AAEX03012407 RefSeq:XP_542047.1
ProteinModelPortal:E2RRL3 Ensembl:ENSCAFT00000027316 GeneID:484931
KEGG:cfa:484931 NextBio:20858998 Uniprot:E2RRL3
Length = 315
Score = 131 (51.2 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 36/117 (30%), Positives = 58/117 (49%)
Query: 66 GAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVL 125
GA+ VR++ G +T D ++LW+ + +R+ G HG E A + D +
Sbjct: 26 GAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSG-HGY-EVLDAAGSFDNSSLC 83
Query: 126 SCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWD 182
S G D V LW+V+SG++V+++ G H FN+ +LS S+ I WD
Sbjct: 84 SGGGDKAVVLWDVASGQVVRKFRG--HAGKVNTVQFNEEATVILSGSIDSS-IRCWD 137
Score = 128 (50.1 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 33/118 (27%), Positives = 53/118 (44%)
Query: 108 GTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEF 167
G + F D + L+CG D T+KLW G L++ Y G + L F+++
Sbjct: 24 GQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSS-- 81
Query: 168 VLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGT-DRSVRFW 224
L +V+WD + + V K+ H G ++ + EA I G+ D S+R W
Sbjct: 82 -LCSGGGDKAVVLWDVASGQVVRKFRG-HAGKVNTVQFNE-EATVILSGSIDSSIRCW 136
Score = 112 (44.5 bits), Expect = 0.00037, P = 0.00037
Identities = 48/225 (21%), Positives = 90/225 (40%)
Query: 2 FDFSKATAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPE 61
+D + R FR V +V F+ +L+G+ +D + + + E
Sbjct: 94 WDVASGQVVRKFR--GHAGKVNTVQFNEEATVILSGSIDSSIRCWDCRSRRPEPVQTLDE 151
Query: 62 ISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
I+ V+ S ++ S DG +R +D VG+ T F++D
Sbjct: 152 --ARDGISSVKVSDHE--VLSGSVDGRVRRYDLRMGQLFSDYVGS----PITCTCFSRDG 203
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
+ L DST++L + +G L+ +Y G + + + ++ + V+S E ++ W
Sbjct: 204 QCTLVSSLDSTLRLLDKDTGELLGEYTGHKNQEYKLDCCLSERDTHVVSCSE-DGKVYFW 262
Query: 182 DALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWKE 226
D L +A G + + + P E +T SV W+E
Sbjct: 263 D-LVEGALALALPVGPGVVQSLAYHPTEPCLLTA-MGGSVHCWRE 305
>UNIPROTKB|Q9BRX9 [details] [associations]
symbol:WDR83 "WD repeat domain-containing protein 83"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471106 GO:GO:0000398 GO:GO:0071013 UniGene:Hs.657204
HOGENOM:HOG000091642 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V OMA:CKQGAVR EMBL:AK223195 EMBL:AK314164
EMBL:BC005870 IPI:IPI00031581 RefSeq:NP_001093207.1
RefSeq:NP_115708.1 ProteinModelPortal:Q9BRX9 SMR:Q9BRX9
STRING:Q9BRX9 PhosphoSite:Q9BRX9 DMDM:74761224 PRIDE:Q9BRX9
DNASU:84292 Ensembl:ENST00000242796 Ensembl:ENST00000418543
GeneID:84292 KEGG:hsa:84292 UCSC:uc002mue.4 GeneCards:GC19P012777
HGNC:HGNC:32672 HPA:HPA042629 HPA:HPA042838 neXtProt:NX_Q9BRX9
PharmGKB:PA165394765 InParanoid:Q9BRX9 PhylomeDB:Q9BRX9
ChiTaRS:WDR83 GenomeRNAi:84292 NextBio:73931 ArrayExpress:Q9BRX9
Bgee:Q9BRX9 Genevestigator:Q9BRX9 GermOnline:ENSG00000123154
Uniprot:Q9BRX9
Length = 315
Score = 131 (51.2 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 36/117 (30%), Positives = 58/117 (49%)
Query: 66 GAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVL 125
GA+ VR++ G +T D ++LW+ + +R+ G HG E A + D +
Sbjct: 26 GAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSG-HGY-EVLDAAGSFDNSSLC 83
Query: 126 SCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWD 182
S G D V LW+V+SG++V+++ G H FN+ +LS S+ I WD
Sbjct: 84 SGGGDKAVVLWDVASGQVVRKFRG--HAGKVNTVQFNEEATVILSGSIDSS-IRCWD 137
Score = 128 (50.1 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 33/118 (27%), Positives = 53/118 (44%)
Query: 108 GTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEF 167
G + F D + L+CG D T+KLW G L++ Y G + L F+++
Sbjct: 24 GQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSS-- 81
Query: 168 VLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGT-DRSVRFW 224
L +V+WD + + V K+ H G ++ + EA I G+ D S+R W
Sbjct: 82 -LCSGGGDKAVVLWDVASGQVVRKFRG-HAGKVNTVQFNE-EATVILSGSIDSSIRCW 136
Score = 111 (44.1 bits), Expect = 0.00048, P = 0.00048
Identities = 47/225 (20%), Positives = 90/225 (40%)
Query: 2 FDFSKATAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPE 61
+D + R FR V +V F+ +L+G+ +D + + + E
Sbjct: 94 WDVASGQVVRKFR--GHAGKVNTVQFNEEATVILSGSIDSSIRCWDCRSRRPEPVQTLDE 151
Query: 62 ISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
++ V+ S + S DG +R +D VG+ T F++D
Sbjct: 152 --ARDGVSSVKVSDHE--ILAGSVDGRVRRYDLRMGQLFSDYVGS----PITCTCFSRDG 203
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
+ L DST++L + +G L+ +Y G + + + ++ + V+S E ++ W
Sbjct: 204 QCTLVSSLDSTLRLLDKDTGELLGEYKGHKNQEYKLDCCLSERDTHVVSCSE-DGKVFFW 262
Query: 182 DALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWKE 226
D L +A G + + + P E +T SV+ W+E
Sbjct: 263 D-LVEGALALALPVGSGVVQSLAYHPTEPCLLTA-MGGSVQCWRE 305
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 135 (52.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 37/127 (29%), Positives = 66/127 (51%)
Query: 63 SVNGAINQVRYSSTGGMYVTA-SKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
++ G N+V G++V + S D +IR+WD + NC+ ++ G H + TS KD
Sbjct: 416 TLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTG-HQSL--TSGMELKDN 472
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAV-FNDTEEFVLSIDEPSNEIVI 180
++S DSTVK+W++ +G+ ++ G Q + FN + FV++ + + +
Sbjct: 473 -ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGT-VKL 528
Query: 181 WDALTAE 187
WD T E
Sbjct: 529 WDLKTGE 535
Score = 125 (49.1 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 47/208 (22%), Positives = 91/208 (43%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T VR + H +++G+ ++D+ T QC L + ++ A+ V+Y G
Sbjct: 341 TSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQC-LHVLMGHVA---AVRCVQYD--GR 392
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
V+ + D +++WD + C+ ++ G H T S F D V+S D+++++W+V
Sbjct: 393 RVVSGAYDFMVKVWDPETETCLHTLQG-H-TNRVYSLQF--DGIHVVSGSLDTSIRVWDV 448
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE--KVAKWSSNH 196
+G + G H L D +L + + IWD T + + + + H
Sbjct: 449 ETGNCIHTLTG--HQSLTSGMELKDN---ILVSGNADSTVKIWDIKTGQCLQTLQGPNKH 503
Query: 197 IGAPRWIEHSPAEAAFITCGTDRSVRFW 224
A ++ + + IT D +V+ W
Sbjct: 504 QSAVTCLQFN--KNFVITSSDDGTVKLW 529
Score = 113 (44.8 bits), Expect = 0.00075, P = 0.00075
Identities = 36/148 (24%), Positives = 68/148 (45%)
Query: 77 GGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLW 136
G V+ S D +++W V+ C+R++VG H T S+ +D ++S D T+K+W
Sbjct: 271 GNRIVSGSDDNTLKVWSAVTGKCLRTLVG-H-TGGVWSSQM-RDN-IIISGSTDRTLKVW 326
Query: 137 EVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNH 196
+G + G T T +R + E+ V+S + + +WD T + + H
Sbjct: 327 NAETGECIHTLYGHTST-VRCMHLH---EKRVVSGSRDAT-LRVWDIETGQCLHVLMG-H 380
Query: 197 IGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+ A R +++ ++ D V+ W
Sbjct: 381 VAAVRCVQYDGRRV--VSGAYDFMVKVW 406
>UNIPROTKB|C9JLV4 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
InterPro:IPR011047 SUPFAM:SSF50998 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 EMBL:AC011248
HOGENOM:HOG000290173 HGNC:HGNC:576 EMBL:AC013283 IPI:IPI00953387
SMR:C9JLV4 STRING:C9JLV4 Ensembl:ENST00000339433
Ensembl:ENST00000549007 Uniprot:C9JLV4
Length = 1163
Score = 138 (53.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 41/157 (26%), Positives = 67/157 (42%)
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
+ T S D ++LWD C ++ G H T F+ D + + SC D T+KLW+
Sbjct: 715 LLATGSSDCFLKLWDLNQKECRNTMFG-H-TNSVNHCRFSPDDKLLASCSADGTLKLWDA 772
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVL----SID------EPSNEIVIWDALTAEK 188
+S K + L + D E V S D N+I +W+ + K
Sbjct: 773 TSANERKS-INVKQFFLNLEDPQEDMEVIVKCCSWSADGARIMVAAKNKIFLWNTDSRSK 831
Query: 189 VAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
VA H+ + SP ++F+T D+++R W+
Sbjct: 832 VAD-CRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWE 867
Score = 117 (46.2 bits), Expect = 0.00061, P = 0.00061
Identities = 34/159 (21%), Positives = 63/159 (39%)
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLS 126
A+ +S G + D ++++ + + I AH E F+ D RF+ +
Sbjct: 617 AVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIK-AHED-EVLCCAFSTDDRFIAT 674
Query: 127 CGKDSTVKLWEVSSGRLVKQYLGATHT-QLRFQAVFNDTEEFVLSIDEPSNEIVIWDALT 185
C D VK+W +G LV Y H+ Q+ N + +L+ + +WD L
Sbjct: 675 CSVDKKVKIWNSMTGELVHTY--DEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWD-LN 731
Query: 186 AEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
++ H + SP + +C D +++ W
Sbjct: 732 QKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLW 770
Score = 91 (37.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 33/137 (24%), Positives = 57/137 (41%)
Query: 84 SKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRL 143
S DG +++W+ ++ N + V GT S + + D S D T K+W VS+G L
Sbjct: 1019 SFDGTVKVWNIITGNKEKDFVCHQGTV--LSCDISHDATKFSSTSADKTAKIWNVSNGEL 1076
Query: 144 V------KQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHI 197
+ + ATH F+ + ++S I W+ +T E + +N
Sbjct: 1077 LHLCAPLSEEGAATHGGWVTDLCFSPDGKMLISA---GGYIKWWNVVTGESSQTFYTNGT 1133
Query: 198 GAPRWIEHSPAEAAFIT 214
+ I SP ++T
Sbjct: 1134 NLKK-IHVSPDFKTYVT 1149
Score = 86 (35.3 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 28/90 (31%), Positives = 41/90 (45%)
Query: 18 DTHN--VRSVSFHPSGDFLL--AGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRY 73
D H+ V F S LL G+ L+D+N +C N N ++N R+
Sbjct: 696 DEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKEC---RNTMFGHTN-SVNHCRF 751
Query: 74 SSTGGMYVTASKDGAIRLWDGVSANCVRSI 103
S + + S DG ++LWD SAN +SI
Sbjct: 752 SPDDKLLASCSADGTLKLWDATSANERKSI 781
>MGI|MGI:1924290 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000045 "autophagic vacuole
assembly" evidence=TAS] [GO:0000421 "autophagic vacuole membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005776 "autophagic
vacuole" evidence=IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1924290 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319
GeneTree:ENSGT00700000104505 InterPro:IPR020472 PRINTS:PR00320
CTD:55054 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8 GO:GO:0000421
GO:GO:0034045 GO:GO:0000045 InterPro:IPR013923 Pfam:PF08614
EMBL:AB087879 EMBL:AB087880 EMBL:AB087881 EMBL:AK005181
EMBL:AK030983 EMBL:AK131120 EMBL:BC049122 IPI:IPI00223832
IPI:IPI00403350 IPI:IPI00554838 IPI:IPI00554885 IPI:IPI01027707
RefSeq:NP_001192320.1 RefSeq:NP_084122.2 UniGene:Mm.272972
UniGene:Mm.456099 ProteinModelPortal:Q8C0J2 SMR:Q8C0J2
DIP:DIP-31966N IntAct:Q8C0J2 MINT:MINT-136268 STRING:Q8C0J2
PhosphoSite:Q8C0J2 REPRODUCTION-2DPAGE:Q8C0J2 PaxDb:Q8C0J2
PRIDE:Q8C0J2 Ensembl:ENSMUST00000027512 Ensembl:ENSMUST00000113186
Ensembl:ENSMUST00000113190 GeneID:77040 KEGG:mmu:77040
UCSC:uc007bxl.1 UCSC:uc007bxm.1 OMA:LETECQE NextBio:346354
Bgee:Q8C0J2 CleanEx:MM_ATG16L1 Genevestigator:Q8C0J2
GermOnline:ENSMUSG00000026289 Uniprot:Q8C0J2
Length = 607
Score = 135 (52.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 53/206 (25%), Positives = 91/206 (44%)
Query: 18 DTHN--VRSVSFHPSGDFLLA--GTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRY 73
D H+ V +V F P G LLA G D + L++ +C ++ N I + +
Sbjct: 319 DAHDGEVNAVQFSP-GSRLLATGGMDRRVK-LWEAFGDKCEFKGSLS--GSNAGITSIEF 374
Query: 74 SSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTV 133
S G + AS D A R+W V +R + H + + SA F D ++S D T+
Sbjct: 375 DSAGAYLLAASNDFASRIWT-VDDYRLRHTLTGH-SGKVLSAKFLLDNARIVSGSHDRTL 432
Query: 134 KLWEVSSGRLVKQ-YLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKW 192
KLW++ S +K + G++ + TE+ V+S +I WD + +E V +
Sbjct: 433 KLWDLRSKVCIKTVFAGSSCNDIVC------TEQCVMS-GHFDKKIRFWD-IRSESVVR- 483
Query: 193 SSNHIGAPRWIEHSPAEAAFITCGTD 218
+G ++ +P ++C D
Sbjct: 484 EMELLGKITALDLNPERTELLSCSRD 509
>TAIR|locus:2028481 [details] [associations]
symbol:SCD1 "STOMATAL CYTOKINESIS-DEFECTIVE 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA;IMP] [GO:0009825 "multidimensional cell growth"
evidence=IMP] [GO:0010052 "guard cell differentiation"
evidence=IMP] [GO:0010235 "guard mother cell cytokinesis"
evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0009825 HSSP:P16649 GO:GO:0080008 InterPro:IPR005112
InterPro:IPR001194 InterPro:IPR005113 Pfam:PF03455 Pfam:PF02141
Pfam:PF03456 SMART:SM00801 SMART:SM00799 SMART:SM00800
PROSITE:PS50947 PROSITE:PS50211 PROSITE:PS50946 EMBL:AY082605
IPI:IPI00522154 RefSeq:NP_850959.1 UniGene:At.38309
ProteinModelPortal:Q8RXA7 SMR:Q8RXA7 PaxDb:Q8RXA7 PRIDE:Q8RXA7
EnsemblPlants:AT1G49040.1 GeneID:841327 KEGG:ath:AT1G49040
TAIR:At1g49040 HOGENOM:HOG000029412 InParanoid:Q8RXA7 OMA:YRNFIEN
PhylomeDB:Q8RXA7 ProtClustDB:CLSN2680426 Genevestigator:Q8RXA7
GO:GO:0010235 Uniprot:Q8RXA7
Length = 1187
Score = 138 (53.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 51/209 (24%), Positives = 99/209 (47%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGA-INQVRYSSTG 77
T VR++S G +++G+D ++D T Q + E+ + + ++ V+ S G
Sbjct: 899 TGTVRAIS-SDRGK-IVSGSDDLSVIVWDKQTTQL-----LEELKGHDSQVSCVKMLS-G 950
Query: 78 GMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWE 137
+TA+ DG +++WD + CV + VG +A S + + + G+D+ +W+
Sbjct: 951 ERVLTAAHDGTVKMWDVRTDMCVAT-VGRCSSA-ILSLEYDDSTGILAAAGRDTVANIWD 1008
Query: 138 VSSGRLVKQYLGATHTQ-LRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNH 196
+ SG+ + + G HT+ +R + DT + D+ + + W A + H
Sbjct: 1009 IRSGKQMHKLKG--HTKWIRSIRMVEDT--LITGSDDWTARV--WSVSRGSCDAVLAC-H 1061
Query: 197 IGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
G + +E+SP + IT D +RFW+
Sbjct: 1062 AGPVQSVEYSPFDKGIITGSADGLLRFWE 1090
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 135 (52.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 37/127 (29%), Positives = 66/127 (51%)
Query: 63 SVNGAINQVRYSSTGGMYVTA-SKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
++ G N+V G++V + S D +IR+WD + NC+ ++ G H + TS KD
Sbjct: 456 TLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTG-HQSL--TSGMELKDN 512
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAV-FNDTEEFVLSIDEPSNEIVI 180
++S DSTVK+W++ +G+ ++ G Q + FN + FV++ + + +
Sbjct: 513 -ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGT-VKL 568
Query: 181 WDALTAE 187
WD T E
Sbjct: 569 WDLKTGE 575
Score = 125 (49.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 47/208 (22%), Positives = 91/208 (43%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T VR + H +++G+ ++D+ T QC L + ++ A+ V+Y G
Sbjct: 381 TSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQC-LHVLMGHVA---AVRCVQYD--GR 432
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
V+ + D +++WD + C+ ++ G H T S F D V+S D+++++W+V
Sbjct: 433 RVVSGAYDFMVKVWDPETETCLHTLQG-H-TNRVYSLQF--DGIHVVSGSLDTSIRVWDV 488
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE--KVAKWSSNH 196
+G + G H L D +L + + IWD T + + + + H
Sbjct: 489 ETGNCIHTLTG--HQSLTSGMELKDN---ILVSGNADSTVKIWDIKTGQCLQTLQGPNKH 543
Query: 197 IGAPRWIEHSPAEAAFITCGTDRSVRFW 224
A ++ + + IT D +V+ W
Sbjct: 544 QSAVTCLQFN--KNFVITSSDDGTVKLW 569
Score = 113 (44.8 bits), Expect = 0.00082, P = 0.00082
Identities = 36/148 (24%), Positives = 68/148 (45%)
Query: 77 GGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLW 136
G V+ S D +++W V+ C+R++VG H T S+ +D ++S D T+K+W
Sbjct: 311 GNRIVSGSDDNTLKVWSAVTGKCLRTLVG-H-TGGVWSSQM-RDN-IIISGSTDRTLKVW 366
Query: 137 EVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNH 196
+G + G T T +R + E+ V+S + + +WD T + + H
Sbjct: 367 NAETGECIHTLYGHTST-VRCMHLH---EKRVVSGSRDAT-LRVWDIETGQCLHVLMG-H 420
Query: 197 IGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+ A R +++ ++ D V+ W
Sbjct: 421 VAAVRCVQYDGRRV--VSGAYDFMVKVW 446
>CGD|CAL0005182 [details] [associations]
symbol:orf19.5413 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005182 GO:GO:0005737 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
GO:GO:0007049 EMBL:AACQ01000051 EMBL:AACQ01000050 KO:K12862
RefSeq:XP_717691.1 RefSeq:XP_717785.1 ProteinModelPortal:Q5A7Q3
STRING:Q5A7Q3 GeneID:3640515 GeneID:3640625 KEGG:cal:CaO19.12868
KEGG:cal:CaO19.5413 Uniprot:Q5A7Q3
Length = 389
Score = 125 (49.1 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 53/230 (23%), Positives = 97/230 (42%)
Query: 5 SKATAKRAFRVIQDTHN--VRSVSFHP-SGDFLLAGTDHPIAHLYDV--NTFQCYLSANV 59
S A + R + H +R+++ + + + G+ ++D N+ + L+ +V
Sbjct: 69 SPAAEWKLLRTLAGAHQGWIRAIALDEITNKWYVTGSADSTIKIWDFENNSLKAVLTGHV 128
Query: 60 PEISVNGAINQVRYSSTGGMYVTASKDGAIRLWD----GVSANC-VRSIVGAHGTAEATS 114
I + Y +GG +D ++R WD A C +RS G G +
Sbjct: 129 LGIRSLCISKRHPYLFSGG------EDKSLRCWDLERSNSDAGCQIRSYHGHLGGVYSIG 182
Query: 115 ANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEP 174
+ D F S GKD V++W++ S LG T+ + +ND + S+D
Sbjct: 183 LHPELDVLF--SGGKDCVVRVWDIRSRVEAMTLLGHTNDITSIETDYNDPQVITSSMD-- 238
Query: 175 SNEIVIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
I +WD L K +NH + R ++ P EA F++ ++ ++ W
Sbjct: 239 -GTIRLWD-LRKSKTELLITNHSKSIRSMKSHPKEATFVSGDSNGEIKQW 286
Score = 43 (20.2 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 213 ITCGTDRSVRFW 224
+TC D+S+R W
Sbjct: 374 LTCHGDKSIRIW 385
>UNIPROTKB|Q5A7Q3 [details] [associations]
symbol:PRP46 "Pre-mRNA-splicing factor PRP46"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005182 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0005681 GO:GO:0007049 EMBL:AACQ01000051
EMBL:AACQ01000050 KO:K12862 RefSeq:XP_717691.1 RefSeq:XP_717785.1
ProteinModelPortal:Q5A7Q3 STRING:Q5A7Q3 GeneID:3640515
GeneID:3640625 KEGG:cal:CaO19.12868 KEGG:cal:CaO19.5413
Uniprot:Q5A7Q3
Length = 389
Score = 125 (49.1 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 53/230 (23%), Positives = 97/230 (42%)
Query: 5 SKATAKRAFRVIQDTHN--VRSVSFHP-SGDFLLAGTDHPIAHLYDV--NTFQCYLSANV 59
S A + R + H +R+++ + + + G+ ++D N+ + L+ +V
Sbjct: 69 SPAAEWKLLRTLAGAHQGWIRAIALDEITNKWYVTGSADSTIKIWDFENNSLKAVLTGHV 128
Query: 60 PEISVNGAINQVRYSSTGGMYVTASKDGAIRLWD----GVSANC-VRSIVGAHGTAEATS 114
I + Y +GG +D ++R WD A C +RS G G +
Sbjct: 129 LGIRSLCISKRHPYLFSGG------EDKSLRCWDLERSNSDAGCQIRSYHGHLGGVYSIG 182
Query: 115 ANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEP 174
+ D F S GKD V++W++ S LG T+ + +ND + S+D
Sbjct: 183 LHPELDVLF--SGGKDCVVRVWDIRSRVEAMTLLGHTNDITSIETDYNDPQVITSSMD-- 238
Query: 175 SNEIVIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
I +WD L K +NH + R ++ P EA F++ ++ ++ W
Sbjct: 239 -GTIRLWD-LRKSKTELLITNHSKSIRSMKSHPKEATFVSGDSNGEIKQW 286
Score = 43 (20.2 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 213 ITCGTDRSVRFW 224
+TC D+S+R W
Sbjct: 374 LTCHGDKSIRIW 385
>UNIPROTKB|F1SEX9 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 KO:K13124 OMA:CKQGAVR
EMBL:CU856041 RefSeq:XP_003123369.1 Ensembl:ENSSSCT00000014996
GeneID:100519823 KEGG:ssc:100519823 Uniprot:F1SEX9
Length = 311
Score = 130 (50.8 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 35/117 (29%), Positives = 58/117 (49%)
Query: 66 GAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVL 125
GA+ VR++ G +T D ++LW+ + +R+ G HG E A + D +
Sbjct: 26 GAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSG-HGY-EVLDAAGSFDNSSLC 83
Query: 126 SCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWD 182
S G D V LW+V+SG++V+++ G H FN+ +LS S+ + WD
Sbjct: 84 SGGGDKAVVLWDVASGQVVRKFRG--HAGKVNTVQFNEEATVILSGSIDSS-VRCWD 137
Score = 129 (50.5 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 34/118 (28%), Positives = 53/118 (44%)
Query: 108 GTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEF 167
G + F D + L+CG D T+KLW G L++ Y G + L F+++
Sbjct: 24 GQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSS-- 81
Query: 168 VLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGT-DRSVRFW 224
L +V+WD + + V K+ H G ++ + EA I G+ D SVR W
Sbjct: 82 -LCSGGGDKAVVLWDVASGQVVRKFRG-HAGKVNTVQFNE-EATVILSGSIDSSVRCW 136
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 135 (52.6 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 37/127 (29%), Positives = 66/127 (51%)
Query: 63 SVNGAINQVRYSSTGGMYVTA-SKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
++ G N+V G++V + S D +IR+WD + NC+ ++ G H + TS KD
Sbjct: 536 TLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTG-HQSL--TSGMELKDN 592
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAV-FNDTEEFVLSIDEPSNEIVI 180
++S DSTVK+W++ +G+ ++ G Q + FN + FV++ + + +
Sbjct: 593 -ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGT-VKL 648
Query: 181 WDALTAE 187
WD T E
Sbjct: 649 WDLKTGE 655
Score = 125 (49.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 47/208 (22%), Positives = 91/208 (43%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T VR + H +++G+ ++D+ T QC L + ++ A+ V+Y G
Sbjct: 461 TSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQC-LHVLMGHVA---AVRCVQYD--GR 512
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
V+ + D +++WD + C+ ++ G H T S F D V+S D+++++W+V
Sbjct: 513 RVVSGAYDFMVKVWDPETETCLHTLQG-H-TNRVYSLQF--DGIHVVSGSLDTSIRVWDV 568
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE--KVAKWSSNH 196
+G + G H L D +L + + IWD T + + + + H
Sbjct: 569 ETGNCIHTLTG--HQSLTSGMELKDN---ILVSGNADSTVKIWDIKTGQCLQTLQGPNKH 623
Query: 197 IGAPRWIEHSPAEAAFITCGTDRSVRFW 224
A ++ + + IT D +V+ W
Sbjct: 624 QSAVTCLQFN--KNFVITSSDDGTVKLW 649
Score = 113 (44.8 bits), Expect = 0.00096, P = 0.00096
Identities = 36/148 (24%), Positives = 68/148 (45%)
Query: 77 GGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLW 136
G V+ S D +++W V+ C+R++VG H T S+ +D ++S D T+K+W
Sbjct: 391 GNRIVSGSDDNTLKVWSAVTGKCLRTLVG-H-TGGVWSSQM-RDN-IIISGSTDRTLKVW 446
Query: 137 EVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNH 196
+G + G T T +R + E+ V+S + + +WD T + + H
Sbjct: 447 NAETGECIHTLYGHTST-VRCMHLH---EKRVVSGSRDAT-LRVWDIETGQCLHVLMG-H 500
Query: 197 IGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+ A R +++ ++ D V+ W
Sbjct: 501 VAAVRCVQYDGRRV--VSGAYDFMVKVW 526
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 135 (52.6 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 37/127 (29%), Positives = 66/127 (51%)
Query: 63 SVNGAINQVRYSSTGGMYVTA-SKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
++ G N+V G++V + S D +IR+WD + NC+ ++ G H + TS KD
Sbjct: 541 TLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTG-HQSL--TSGMELKDN 597
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAV-FNDTEEFVLSIDEPSNEIVI 180
++S DSTVK+W++ +G+ ++ G Q + FN + FV++ + + +
Sbjct: 598 -ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGT-VKL 653
Query: 181 WDALTAE 187
WD T E
Sbjct: 654 WDLKTGE 660
Score = 125 (49.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 47/208 (22%), Positives = 91/208 (43%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T VR + H +++G+ ++D+ T QC L + ++ A+ V+Y G
Sbjct: 466 TSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQC-LHVLMGHVA---AVRCVQYD--GR 517
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
V+ + D +++WD + C+ ++ G H T S F D V+S D+++++W+V
Sbjct: 518 RVVSGAYDFMVKVWDPETETCLHTLQG-H-TNRVYSLQF--DGIHVVSGSLDTSIRVWDV 573
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE--KVAKWSSNH 196
+G + G H L D +L + + IWD T + + + + H
Sbjct: 574 ETGNCIHTLTG--HQSLTSGMELKDN---ILVSGNADSTVKIWDIKTGQCLQTLQGPNKH 628
Query: 197 IGAPRWIEHSPAEAAFITCGTDRSVRFW 224
A ++ + + IT D +V+ W
Sbjct: 629 QSAVTCLQFN--KNFVITSSDDGTVKLW 654
Score = 113 (44.8 bits), Expect = 0.00097, P = 0.00097
Identities = 36/148 (24%), Positives = 68/148 (45%)
Query: 77 GGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLW 136
G V+ S D +++W V+ C+R++VG H T S+ +D ++S D T+K+W
Sbjct: 396 GNRIVSGSDDNTLKVWSAVTGKCLRTLVG-H-TGGVWSSQM-RDN-IIISGSTDRTLKVW 451
Query: 137 EVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNH 196
+G + G T T +R + E+ V+S + + +WD T + + H
Sbjct: 452 NAETGECIHTLYGHTST-VRCMHLH---EKRVVSGSRDAT-LRVWDIETGQCLHVLMG-H 505
Query: 197 IGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+ A R +++ ++ D V+ W
Sbjct: 506 VAAVRCVQYDGRRV--VSGAYDFMVKVW 531
>UNIPROTKB|Q0VCN2 [details] [associations]
symbol:MORG1 "Mitogen-activated protein kinase organizer 1"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016301 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:DAAA02019387 EMBL:DAAA02019388 EMBL:BC120088 IPI:IPI00687810
RefSeq:NP_001073118.1 UniGene:Bt.64656 Ensembl:ENSBTAT00000008196
GeneID:780845 KEGG:bta:780845 InParanoid:Q0VCN2 NextBio:20924512
Uniprot:Q0VCN2
Length = 315
Score = 130 (50.8 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 36/117 (30%), Positives = 57/117 (48%)
Query: 66 GAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVL 125
GA+ VR++ G +T D ++LW+ + +R+ G HG E A + D +
Sbjct: 26 GAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSG-HGY-EVLDAAGSFDNSSLC 83
Query: 126 SCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWD 182
S G D V LW+V+SG++V+++ G H FN+ +LS S I WD
Sbjct: 84 SGGGDKAVVLWDVASGQVVRKFRG--HAGKVNTVQFNEEATVILSGSIDST-IRCWD 137
Score = 125 (49.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 32/118 (27%), Positives = 53/118 (44%)
Query: 108 GTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEF 167
G + F D + L+CG D T+KLW G L++ Y G + L F+++
Sbjct: 24 GQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSS-- 81
Query: 168 VLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGT-DRSVRFW 224
L +V+WD + + V K+ H G ++ + EA I G+ D ++R W
Sbjct: 82 -LCSGGGDKAVVLWDVASGQVVRKFRG-HAGKVNTVQFNE-EATVILSGSIDSTIRCW 136
Score = 111 (44.1 bits), Expect = 0.00048, P = 0.00048
Identities = 47/225 (20%), Positives = 90/225 (40%)
Query: 2 FDFSKATAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPE 61
+D + R FR V +V F+ +L+G+ +D + + + E
Sbjct: 94 WDVASGQVVRKFR--GHAGKVNTVQFNEEATVILSGSIDSTIRCWDCRSRKPEPVQTLDE 151
Query: 62 ISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
I+ V+ S + S DG +R +D VG+ T F++D
Sbjct: 152 --ARDGISSVKVSDHE--VLAGSVDGRVRRYDLRMGQLFSDYVGS----PITCICFSRDG 203
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
+ L DST++L + +G L+ +Y G + + + ++ + V+S E ++ W
Sbjct: 204 QCTLVSSLDSTLRLLDKDTGELLGEYTGHKNKEYKLDCCLSERDTHVVSCSE-DGKVFFW 262
Query: 182 DALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWKE 226
D L +A G + + + P E +T S++ W+E
Sbjct: 263 D-LVEGALALALPVGPGVVQSLTYHPTEPCLLTA-MGGSIQCWRE 305
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 132 (51.5 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 56/219 (25%), Positives = 93/219 (42%)
Query: 13 FRVIQDTH--NVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEI-SVNGAIN 69
FR +Q H + +V+F+ SG + G+ YD T + + +A+ E+ ++ G N
Sbjct: 85 FRALQ-AHILPLTNVAFNKSGSCFITGS-------YD-RTCKIWDTASGEELHTLEGHRN 135
Query: 70 QV---RYSST-GGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVL 125
V +++ G T S D +LW + C + G H TAE F V
Sbjct: 136 VVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRG-H-TAEIVCLAFNPQSTLVA 193
Query: 126 SCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALT 185
+ D+T KLW+V SG V G H FN T + +++ + ++WD +
Sbjct: 194 TGSMDTTAKLWDVESGEEVSTLAG--HFAEIISLCFNTTGDRLVT-GSFDHTAILWDVPS 250
Query: 186 AEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
KV S H G ++ + + T D+S + W
Sbjct: 251 GRKVHVLSG-HRGEISCVQFNWDCSLIATASLDKSCKVW 288
Score = 119 (46.9 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 48/222 (21%), Positives = 88/222 (39%)
Query: 4 FSKATAKRAFRVIQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEIS 63
+S T K + T + ++F+P + G+ A L+DV + + V ++
Sbjct: 162 WSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGE-----EVSTLA 216
Query: 64 VNGA-INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQR 122
+ A I + +++TG VT S D LWD S V + G G E + F D
Sbjct: 217 GHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRG--EISCVQFNWDCS 274
Query: 123 FVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWD 182
+ + D + K+W+ G+ + LG H FN T + + + V +
Sbjct: 275 LIATASLDKSCKVWDAEGGQCLATLLG--HNDEVLDVCFNYTGQLIATASADGTSRV-FS 331
Query: 183 ALTAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
T + + + H G + + + +T D++ R W
Sbjct: 332 TDTFQCLCQLEG-HKGEISKVCFNAQGSRVLTASVDKTSRVW 372
>DICTYBASE|DDB_G0278945 [details] [associations]
symbol:DDB_G0278945 "WD repeat-containing protein 82"
species:44689 "Dictyostelium discoideum" [GO:0030587 "sorocarp
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278945 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030587 EMBL:AAFI02000024 KO:K14962 OMA:CTNMAFW
RefSeq:XP_641992.1 ProteinModelPortal:Q54XN8 STRING:Q54XN8
EnsemblProtists:DDB0218126 GeneID:8621724 KEGG:ddi:DDB_G0278945
InParanoid:Q54XN8 ProtClustDB:CLSZ2729103 Uniprot:Q54XN8
Length = 319
Score = 130 (50.8 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 53/211 (25%), Positives = 89/211 (42%)
Query: 20 HNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGM 79
+ V S+S P D L+G+ ++D+ T C + NG V + G +
Sbjct: 114 NKVVSISMSPINDMFLSGSLDDTIRMWDLRTNVCQ-----GLLRRNGR-PAVSFDPQGII 167
Query: 80 YVTASKDGAIRLWD--GVSANCVRSIVGAHGT-AEATSANFTKDQRFVLSCGKDSTVKLW 136
+ TA I+L+D S H E TS FT D +++L K + + L
Sbjct: 168 FATAVSVNTIKLYDLRNYDKGPFSSFSIDHPIPVEWTSMKFTADGKYILLSTKTNIIFLI 227
Query: 137 EVSSGRLVKQYLGATHTQLR-FQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWS-- 193
+ +G + ++Y + ++ F+ ++VLS E + IW LT E+VA W
Sbjct: 228 DSFTGEVKQRYTSFKNDNGSVIESSFSPDAQYVLSGSEDGT-VHIWKTLTGEEVAVWGGH 286
Query: 194 SNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
S+ +G +W S A C ++ FW
Sbjct: 287 SSTVGRVQWNPRSMMAAT--ACS---NLAFW 312
>DICTYBASE|DDB_G0284621 [details] [associations]
symbol:pwp2 "periodic tryptophan protein"
species:44689 "Dictyostelium discoideum" [GO:0030515 "snoRNA
binding" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0284621 GO:GO:0005829 GO:GO:0005730
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006364 HSSP:P16649
EMBL:AAFI02000070 KO:K14558 InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:XP_638435.1
ProteinModelPortal:Q54PE0 STRING:Q54PE0 EnsemblProtists:DDB0235358
GeneID:8624685 KEGG:ddi:DDB_G0284621 OMA:HEAPIAC
ProtClustDB:CLSZ2430232 Uniprot:Q54PE0
Length = 922
Score = 136 (52.9 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 36/157 (22%), Positives = 63/157 (40%)
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
+N V YS G T +DG +++W+ S C + G A + Q V S
Sbjct: 361 MNTVAYSPDGQTIATGGEDGKVKIWNTTSGYCYITFTEHEGPVTAVKYSPVSSQNVVFSA 420
Query: 128 GKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE 187
G D T++ +++ R + ++ TQ AV + + E + + S EI +W T
Sbjct: 421 GVDGTIRAFDLVRYRNFRTFVSPNKTQFSCLAV-DPSGEIIAAGSLDSFEIYVWSVRTG- 478
Query: 188 KVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
++ S H + P + D+S + W
Sbjct: 479 RLTDILSGHQSPVCELAFDPINPFLASASWDKSCKIW 515
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 133 (51.9 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 38/143 (26%), Positives = 72/143 (50%)
Query: 8 TAKRAFRVIQDTHNVRSVSFHPSG-DFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNG 66
T + A RV + +N V G + L++G+D +++ + + +S +
Sbjct: 341 TLEEAQRVALERYN--DVKAKSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQL-- 396
Query: 67 AINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLS 126
IN V +S G + +AS D +I+LWDG S + + G G ++ D R+++S
Sbjct: 397 -INLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVC--WSSDSRYLVS 453
Query: 127 CGKDSTVKLWEVSSGRLVKQYLG 149
KDST+K+W++ + ++ K+ G
Sbjct: 454 GSKDSTLKIWDIKTKKMEKELPG 476
Score = 130 (50.8 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 38/158 (24%), Positives = 70/158 (44%)
Query: 69 NQVRYSSTG-GMYVTASKDGAIRLWD-GVSANCVRSIVGAHGTAEATSANFTKDQRFVLS 126
N V+ S G + ++ S D + +W+ V+ + + G S F+ D R+ S
Sbjct: 354 NDVKAKSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVS--FSPDGRYFAS 411
Query: 127 CGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTA 186
D ++KLW+ SG+ + + G H +Q ++ +++S + S + IWD T
Sbjct: 412 ASFDKSIKLWDGQSGKFLGNFRG--HVGAVYQVCWSSDSRYLVSGSKDST-LKIWDIKT- 467
Query: 187 EKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+K+ K H ++ SP + DR +R W
Sbjct: 468 KKMEKELPGHADEVYTVDWSPDGDRVASGSKDRLLRIW 505
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 134 (52.2 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 40/156 (25%), Positives = 63/156 (40%)
Query: 27 FHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTASKD 86
FHPSG L + L+D+N +C L+ N A+ + S G +AS D
Sbjct: 410 FHPSGSKLATSSGDSTIKLWDLNKGECTLTLE----GHNHAVWSCTWHSCGDFVASASLD 465
Query: 87 GAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQ 146
++WD S C ++ G H T S F +L+ D T+ +W+ +G+ +
Sbjct: 466 MTSKIWDVNSERCRYTLYG-H-TDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQS 523
Query: 147 YLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWD 182
G H+ A F + S D +WD
Sbjct: 524 LYGHMHSVN--DATFTPRGHIIASCDA-RGVTKLWD 556
Score = 132 (51.5 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 31/119 (26%), Positives = 56/119 (47%)
Query: 20 HNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGM 79
H V S ++H GDF+ + + + ++DVN+ +C + ++N + + +
Sbjct: 445 HAVWSCTWHSCGDFVASASLDMTSKIWDVNSERCRYTL----YGHTDSVNSIEFFPFSNI 500
Query: 80 YVTASKDGAIRLWDGVSANCVRSIVG-AHGTAEATSANFTKDQRFVLSCGKDSTVKLWE 137
+TAS D + +WD + C +S+ G H +AT FT + SC KLW+
Sbjct: 501 LLTASADKTLSVWDARTGKCEQSLYGHMHSVNDAT---FTPRGHIIASCDARGVTKLWD 556
>UNIPROTKB|F1SP81 [details] [associations]
symbol:PLAA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016005 "phospholipase A2 activator activity"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0006954 GO:GO:0016005
GeneTree:ENSGT00550000074944 InterPro:IPR015155 InterPro:IPR013535
Pfam:PF09070 Pfam:PF08324 PROSITE:PS51394 PROSITE:PS51396
OMA:VSECCRF EMBL:CU313306 EMBL:CU915318 Ensembl:ENSSSCT00000005651
Uniprot:F1SP81
Length = 804
Score = 135 (52.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 57/209 (27%), Positives = 96/209 (45%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTG--GM 79
+ S +P G G DH I ++ L + P + G N V S+G G
Sbjct: 78 IPSSDMYPHGLIATGGNDHNIC-IFS-------LESPAPLYVLKGHKNTVCSLSSGKFGT 129
Query: 80 YVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVS 139
++ S D ++W ++ C+ ++ G H TA + +Q +L+ D T+KLW+
Sbjct: 130 LLSGSWDTTAKVW--LNDKCMMTLQG-H-TAAVWAVKILPEQGLMLTGSADKTIKLWK-- 183
Query: 140 SGRLVKQYLGATHTQ-LRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE--KVAKWSSNH 196
+GR + + H +R A+ ++TE F+ ++ S I W +T E +V +N+
Sbjct: 184 AGRCERTFSDIGHEDCVRGLAILSETE-FLSCANDAS--IRKWQ-ITGECLEVFYGHTNY 239
Query: 197 IGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
I + I P F+T G DRS+R WK
Sbjct: 240 IYS---ISVFPNCKDFVTTGEDRSLRIWK 265
>ASPGD|ASPL0000037495 [details] [associations]
symbol:cdhA species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008054 "cyclin catabolic
process" evidence=IMP] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0030996 "cell cycle arrest in response to nitrogen starvation"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IEA] [GO:0000750 "pheromone-dependent signal
transduction involved in conjugation with cellular fusion"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BN001306 EMBL:AACD01000051
HOGENOM:HOG000195514 KO:K03364 OrthoDB:EOG43FM5B OMA:PMATANL
RefSeq:XP_660569.1 ProteinModelPortal:Q5B915 STRING:Q5B915
EnsemblFungi:CADANIAT00010116 GeneID:2874026 KEGG:ani:AN2965.2
Uniprot:Q5B915
Length = 592
Score = 133 (51.9 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 37/158 (23%), Positives = 73/158 (46%)
Query: 71 VRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCG-- 128
+R+++ G + D + +WD ++ + H TA + ++ Q +L+ G
Sbjct: 416 LRWNTEDGQLASGGNDNKLLVWDKLNETPLYRF-SDH-TAAVKAITWSPHQHHLLASGGG 473
Query: 129 -KDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE 187
D T+K W ++G L+K+ T +Q+ A +++E + + N+IVIW E
Sbjct: 474 TADRTIKFWNTATGSLIKEV--DTGSQVCNLAWSKNSDEIISTHGYSQNQIVIWKYPRME 531
Query: 188 KVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
++ + H ++ SP +T D ++RFWK
Sbjct: 532 QIVSLTG-HTFRVLYLAMSPDGQTVVTGAGDETLRFWK 568
>UNIPROTKB|Q15269 [details] [associations]
symbol:PWP2 "Periodic tryptophan protein 2 homolog"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471079 GO:GO:0004871
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AP001753 EMBL:AB001517
HOGENOM:HOG000160363 KO:K14558 OMA:VWQCDTP InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003 EMBL:X95263
EMBL:X96424 EMBL:X96425 EMBL:U53346 EMBL:U56085 EMBL:U56089
EMBL:U56086 EMBL:U56087 EMBL:U56088 EMBL:AK314184 EMBL:BC013309
EMBL:BC014988 EMBL:AB001523 IPI:IPI00300078 RefSeq:NP_005040.2
UniGene:Hs.449076 ProteinModelPortal:Q15269 SMR:Q15269
IntAct:Q15269 MINT:MINT-1411448 STRING:Q15269 PhosphoSite:Q15269
DMDM:116242740 SWISS-2DPAGE:Q15269 PaxDb:Q15269 PeptideAtlas:Q15269
PRIDE:Q15269 DNASU:5822 Ensembl:ENST00000291576 GeneID:5822
KEGG:hsa:5822 UCSC:uc002zeb.3 CTD:5822 GeneCards:GC21P045527
H-InvDB:HIX0213175 HGNC:HGNC:9711 HPA:HPA024573 MIM:601475
neXtProt:NX_Q15269 PharmGKB:PA162400451 HOVERGEN:HBG030681
InParanoid:Q15269 OrthoDB:EOG4R7V93 PhylomeDB:Q15269
GenomeRNAi:5822 NextBio:22681 ArrayExpress:Q15269 Bgee:Q15269
CleanEx:HS_PWP2 Genevestigator:Q15269 GermOnline:ENSG00000160220
Uniprot:Q15269
Length = 919
Score = 135 (52.6 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 50/209 (23%), Positives = 90/209 (43%)
Query: 16 IQDTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSS 75
I D ++ SV+ + SGD++ G + L V +Q + N + + YS
Sbjct: 328 ISD-QSIASVAINSSGDWIAFGCSG-LGQLL-VWEWQSESYVLKQQGHFNSMV-ALAYSP 383
Query: 76 TGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKL 135
G VT DG +++W+ +S C + H + T FT V++ D TV+
Sbjct: 384 DGQYIVTGGDDGKVKVWNTLSGFCFVTFT-EHSSG-VTGVTFTATGYVVVTSSMDGTVRA 441
Query: 136 WEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSN 195
+++ R + + TQ AV + + E V + + S EI +W T ++ S
Sbjct: 442 FDLHRYRNFRTFTSPRPTQFSCVAV-DASGEIVSAGAQDSFEIFVWSMQTG-RLLDVLSG 499
Query: 196 HIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
H G + +P ++ + D++VR W
Sbjct: 500 HEGPISGLCFNPMKSVLASASWDKTVRLW 528
>UNIPROTKB|F1RKU4 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GeneTree:ENSGT00700000104507
GO:GO:0055087 EMBL:CU467054 Ensembl:ENSSSCT00000001963 OMA:PPSEVWG
Uniprot:F1RKU4
Length = 287
Score = 128 (50.1 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 44/181 (24%), Positives = 82/181 (45%)
Query: 4 FSKATAKRAFRVIQDTHN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPE 61
F + K+ + + DT + S+++ P G +L +G I +++D+ T + +
Sbjct: 115 FGVESGKKEYSL--DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 172
Query: 62 ISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
+ I + +S + VTAS DG I+++D AN ++ G H + A D
Sbjct: 173 MP----IRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG-HASWVLNVAFCPDDT 227
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
FV S D +VK+W+V + V + H + +N ++S+ + EI I+
Sbjct: 228 HFV-SSSSDKSVKVWDVGTRTCVHTFFD--HQDQVWGVKYNGNGSKIVSVGD-DQEIHIY 283
Query: 182 D 182
D
Sbjct: 284 D 284
Score = 111 (44.1 bits), Expect = 0.00040, P = 0.00040
Identities = 42/202 (20%), Positives = 82/202 (40%)
Query: 24 SVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGA-INQVRYSSTGGMYVT 82
+++F P +L GT H+ VN F + G I + YS G +
Sbjct: 93 TLAFSPDSQYLATGT-----HVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLAS 147
Query: 83 ASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGR 142
+ DG I ++D + + ++ G H S F+ D + +++ D +K+++V
Sbjct: 148 GAIDGIINIFDIATGKLLHTLEG-HAMP-IRSLTFSPDSQLLVTASDDGYIKIYDVQHAN 205
Query: 143 LVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRW 202
L G L +DT FV S + S + +WD T V + +H
Sbjct: 206 LAGTLSGHASWVLNVAFCPDDTH-FVSSSSDKS--VKVWDVGTRTCVHTFF-DHQDQVWG 261
Query: 203 IEHSPAEAAFITCGTDRSVRFW 224
++++ + ++ G D+ + +
Sbjct: 262 VKYNGNGSKIVSVGDDQEIHIY 283
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 134 (52.2 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 36/126 (28%), Positives = 63/126 (50%)
Query: 63 SVNGAINQVRYSSTGGMYVTA-SKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
++ G N+V G++V + S D +IR+WD + NC+ ++ G H + TS KD
Sbjct: 589 TLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTG-HQSL--TSGMELKDN 645
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
++S DSTVK+W++ +G+ + Q L H + FV++ + + +W
Sbjct: 646 -ILVSGNADSTVKIWDIKTGQCL-QTLQGPHKHQSAVTCLQFNKNFVITSSDDGT-VKLW 702
Query: 182 DALTAE 187
D T E
Sbjct: 703 DLRTGE 708
Score = 123 (48.4 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 47/208 (22%), Positives = 90/208 (43%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T VR + H +++G+ ++D+ T QC L + ++ A+ V+Y G
Sbjct: 514 TSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQC-LHVLMGHVA---AVRCVQYD--GR 565
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
V+ + D +++WD + C+ ++ G H T S F D V+S D+++++W+V
Sbjct: 566 RVVSGAYDFMVKVWDPETETCLHTLQG-H-TNRVYSLQF--DGIHVVSGSLDTSIRVWDV 621
Query: 139 SSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE--KVAKWSSNH 196
+G + G H L D +L + + IWD T + + + H
Sbjct: 622 ETGNCIHTLTG--HQSLTSGMELKDN---ILVSGNADSTVKIWDIKTGQCLQTLQGPHKH 676
Query: 197 IGAPRWIEHSPAEAAFITCGTDRSVRFW 224
A ++ + + IT D +V+ W
Sbjct: 677 QSAVTCLQFN--KNFVITSSDDGTVKLW 702
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 31/128 (24%), Positives = 64/128 (50%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T+ V S+ F G +++G+ ++DV T C + + +G +++
Sbjct: 594 TNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM--ELK----DN 645
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEA-TSANFTKDQRFVLSCGKDSTVKLWE 137
+ V+ + D +++WD + C++++ G H A T F K+ FV++ D TVKLW+
Sbjct: 646 ILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKN--FVITSSDDGTVKLWD 703
Query: 138 VSSGRLVK 145
+ +G ++
Sbjct: 704 LRTGEFIR 711
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 133 (51.9 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 38/130 (29%), Positives = 62/130 (47%)
Query: 66 GAINQVRYSSTGGMYVTASKDGAIRLWDG-VSANCVRSIVGAHGTAEATSANFTKDQRFV 124
GA+ V+YS G + +D IRLW V + C SI+ AH A S +F+ D ++
Sbjct: 90 GAVYCVKYSPDGETIASCGQDRQIRLWQNTVQSKC--SIIKAHCGA-IRSMSFSADGGYL 146
Query: 125 LSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDAL 184
LS D T+KLW + + + + G H V + V S + +++WD
Sbjct: 147 LSSSDDKTLKLWRLQDKKFMCSFAG--HKNWVRSGVISPDMRLVASGSDDKT-VMLWDLN 203
Query: 185 TAEKVAKWSS 194
+ V+K+S+
Sbjct: 204 FQKIVSKYST 213
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 129 (50.5 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 49/191 (25%), Positives = 85/191 (44%)
Query: 1 FFDFSKATAK-RAFRVIQDTHN--VRSVSFHPSGDFLL-AGTDHPIAHLYDVNTF-QCYL 55
F + K T+ A ++ H + + F G FL AG D I L+ N F +C
Sbjct: 15 FLELPKRTSSLMAPTMVLQGHGGEIYTSQFSSDGSFLASAGYDQQI-FLW--NVFGECEN 71
Query: 56 SANVPEISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSA 115
A + GAI +V++++ V+A D +R+WD + +C+R+ +
Sbjct: 72 FAVLK--GHKGAIMEVKFNADSSHLVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDV 129
Query: 116 NFTKDQRFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVL--SIDE 173
N + + + S D TV + ++ S K+++ + Q FND + V+ ID
Sbjct: 130 N-RRGPQMICSASDDGTVMVHDMRSKEAAKKFI-CKYQQTA--VTFNDAADNVICGGID- 184
Query: 174 PSNEIVIWDAL 184
N+I +WD L
Sbjct: 185 --NQIKVWDML 193
Score = 111 (44.1 bits), Expect = 0.00053, P = 0.00053
Identities = 33/157 (21%), Positives = 72/157 (45%)
Query: 71 VRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKD 130
V ++ + D I++WD + N VR ++ H TS + + + F+LS D
Sbjct: 169 VTFNDAADNVICGGIDNQIKVWD-MLRNDVRYVLSGHRDT-ITSLSVSHNGNFLLSNSMD 226
Query: 131 STVKLWE----VSSGRLVKQYLGATHTQLR--FQAVFNDTEEFVLSIDEPSNEIVIWDAL 184
++ W+ V + RLV +Y GA+H + + ++ + ++ + + +W+A
Sbjct: 227 CSLMSWDIRPFVPAQRLVARYQGASHNFEKNLLKCGWSPRDNYITA-GSADRFVYVWNAK 285
Query: 185 TAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSV 221
+ V K H+G+ P + ++ G+D+++
Sbjct: 286 SRACVYKLPG-HLGSVNCTALHPTQQILLSAGSDKTI 321
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 129 (50.5 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 50/209 (23%), Positives = 92/209 (44%)
Query: 27 FHPSGDFLLA-GTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGGMYVTASK 85
+HP G+ L G D I ++ + Q +++ V + I V +S G +AS
Sbjct: 22 WHPKGNVLATCGEDKTI-RIWAEDASQRWVAKTVLSDGHSRTIRDVAWSPCGQYLASASF 80
Query: 86 DGAIRLWDGVSAN--CVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGRL 143
D + +WD S C ++ G H E S +++K + +C +D +V +WEV+
Sbjct: 81 DATVAIWDKKSGEFECNATLEG-HEN-EVKSVSWSKSGSLLATCSRDKSVWVWEVAQEDE 138
Query: 144 VK-QYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSS-----NHI 197
+ + THTQ + ++ E+ + S N I ++ A+ + WSS +H
Sbjct: 139 YECAAVLNTHTQDVKKVEWHPHEDILASASY-DNTIKLYKEDLAD--SDWSSFDTLVSHE 195
Query: 198 GAPRWIEHSPAEAAFITCGTDRSVRFWKE 226
I + +C D++V+ W+E
Sbjct: 196 STVWSISFDGSGNRLASCSDDQTVKIWQE 224
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 129 (50.5 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 32/130 (24%), Positives = 61/130 (46%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNT--FQCYLSANVPEISVNGAINQVRYSSTGGM 79
V V FHP +++ ++ ++D T F+ L + ++ + + +G +
Sbjct: 46 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD------SVQDISFDHSGKL 99
Query: 80 YVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVS 139
+ S D I+LWD C+R++ G H +S + ++S +D T+K+WEV
Sbjct: 100 LASCSADMTIKLWDFQGFECIRTMHG-HDH-NVSSVAIMPNGDHIVSASRDKTIKMWEVQ 157
Query: 140 SGRLVKQYLG 149
+G VK + G
Sbjct: 158 TGYCVKTFTG 167
Score = 129 (50.5 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 36/157 (22%), Positives = 70/157 (44%)
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
+ +V + + V+AS+D I++WD + + R++ G H T +F + + SC
Sbjct: 46 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG-H-TDSVQDISFDHSGKLLASC 103
Query: 128 GKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE 187
D T+KLW+ ++ G H + A+ + + V + + + I +W+ T
Sbjct: 104 SADMTIKLWDFQGFECIRTMHGHDHN-VSSVAIMPNGDHIVSASRDKT--IKMWEVQTGY 160
Query: 188 KVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
V K + H R + + +C D++VR W
Sbjct: 161 CV-KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 196
Score = 128 (50.1 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 32/122 (26%), Positives = 58/122 (47%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T +V+ +SF SG L + + L+D F+C + + + +V+ V G
Sbjct: 85 TDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS----VAIMPNGD 140
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
V+AS+D I++W+ + CV++ G N +D + SC D TV++W V
Sbjct: 141 HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN--QDGTLIASCSNDQTVRVWVV 198
Query: 139 SS 140
++
Sbjct: 199 AT 200
Score = 123 (48.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 50/221 (22%), Positives = 100/221 (45%)
Query: 20 HNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSAN-----VPEISVN--GA-INQV 71
HNV SV+ P+GD +++ + +++V T C + V + N G I
Sbjct: 128 HNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASC 187
Query: 72 RYSSTGGMYVTASKD--GAIRLWDGVSANCVR-SIVGAHGT-AEATSANFTKDQR---FV 124
T ++V A+K+ +R + V C+ + ++ + +EAT + K + F+
Sbjct: 188 SNDQTVRVWVVATKECKAELREHEHV-VECISWAPESSYSSISEATGSETKKSGKPGPFL 246
Query: 125 LSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDAL 184
LS +D T+K+W+VS+G + +G H +F+ +F+LS + + +WD
Sbjct: 247 LSGSRDKTIKMWDVSTGMCLMTLVG--HDNWVRGVLFHSGGKFILSCADDKT-LRVWDYK 303
Query: 185 TAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
++ K + H ++ +T D++V+ W+
Sbjct: 304 N-KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 128 (50.1 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 44/181 (24%), Positives = 82/181 (45%)
Query: 4 FSKATAKRAFRVIQDTHN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPE 61
F + K+ + + DT + S+++ P G +L +G I +++D+ T + +
Sbjct: 133 FGVESGKKEYSL--DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 190
Query: 62 ISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
+ I + +S + VTAS DG I+++D AN ++ G H + A D
Sbjct: 191 MP----IRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG-HASWVLNVAFCPDDT 245
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
FV S D +VK+W+V + V + H + +N ++S+ + EI I+
Sbjct: 246 HFV-SSSSDKSVKVWDVGTRTCVHTFFD--HQDQVWGVKYNGNGSKIVSVGD-DQEIHIY 301
Query: 182 D 182
D
Sbjct: 302 D 302
Score = 111 (44.1 bits), Expect = 0.00045, P = 0.00045
Identities = 42/202 (20%), Positives = 82/202 (40%)
Query: 24 SVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGA-INQVRYSSTGGMYVT 82
+++F P +L GT H+ VN F + G I + YS G +
Sbjct: 111 TLAFSPDSQYLATGT-----HVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLAS 165
Query: 83 ASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGR 142
+ DG I ++D + + ++ G H S F+ D + +++ D +K+++V
Sbjct: 166 GAIDGIINIFDIATGKLLHTLEG-HAMP-IRSLTFSPDSQLLVTASDDGYIKIYDVQHAN 223
Query: 143 LVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRW 202
L G L +DT FV S + S + +WD T V + +H
Sbjct: 224 LAGTLSGHASWVLNVAFCPDDTH-FVSSSSDKS--VKVWDVGTRTCVHTFF-DHQDQVWG 279
Query: 203 IEHSPAEAAFITCGTDRSVRFW 224
++++ + ++ G D+ + +
Sbjct: 280 VKYNGNGSKIVSVGDDQEIHIY 301
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 128 (50.1 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 44/181 (24%), Positives = 82/181 (45%)
Query: 4 FSKATAKRAFRVIQDTHN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPE 61
F + K+ + + DT + S+++ P G +L +G I +++D+ T + +
Sbjct: 133 FGVESGKKEYSL--DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 190
Query: 62 ISVNGAINQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQ 121
+ I + +S + VTAS DG I+++D AN ++ G H + A D
Sbjct: 191 MP----IRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG-HASWVLNVAFCPDDT 245
Query: 122 RFVLSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIW 181
FV S D +VK+W+V + V + H + +N ++S+ + EI I+
Sbjct: 246 HFV-SSSSDKSVKVWDVGTRTCVHTFFD--HQDQVWGVKYNGNGSKIVSVGD-DQEIHIY 301
Query: 182 D 182
D
Sbjct: 302 D 302
Score = 111 (44.1 bits), Expect = 0.00045, P = 0.00045
Identities = 42/202 (20%), Positives = 82/202 (40%)
Query: 24 SVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGA-INQVRYSSTGGMYVT 82
+++F P +L GT H+ VN F + G I + YS G +
Sbjct: 111 TLAFSPDSQYLATGT-----HVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLAS 165
Query: 83 ASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGR 142
+ DG I ++D + + ++ G H S F+ D + +++ D +K+++V
Sbjct: 166 GAIDGIINIFDIATGKLLHTLEG-HAMP-IRSLTFSPDSQLLVTASDDGYIKIYDVQHAN 223
Query: 143 LVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAEKVAKWSSNHIGAPRW 202
L G L +DT FV S + S + +WD T V + +H
Sbjct: 224 LAGTLSGHASWVLNVAFCPDDTH-FVSSSSDKS--VKVWDVGTRTCVHTFF-DHQDQVWG 279
Query: 203 IEHSPAEAAFITCGTDRSVRFW 224
++++ + ++ G D+ + +
Sbjct: 280 VKYNGNGSKIVSVGDDQEIHIY 301
>POMBASE|SPBC32H8.07 [details] [associations]
symbol:git5 "heterotrimeric G protein beta subunit Git5"
species:4896 "Schizosaccharomyces pombe" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=TAS] [GO:0007190
"activation of adenylate cyclase activity" evidence=TAS]
[GO:0010619 "adenylate cyclase-activating glucose-activated
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0010972 "negative regulation of G2/M transition of mitotic cell
cycle" evidence=IMP] [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0030159 "receptor signaling complex scaffold
activity" evidence=IDA] [GO:0031138 "negative regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032092
"positive regulation of protein binding" evidence=IDA] [GO:0045014
"negative regulation of transcription by glucose" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 PomBase:SPBC32H8.07 GO:GO:0005829 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0032092 GO:GO:0019933 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007190
GenomeReviews:CU329671_GR GO:GO:0030435 GO:GO:0004871 GO:GO:0030159
EMBL:AB004535 GO:GO:0045014 PRINTS:PR00319 GO:GO:0010972
GO:GO:0005834 HOGENOM:HOG000176356 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 KO:K07972 EMBL:L28061 EMBL:AF092102 PIR:S72457
PIR:T50474 RefSeq:NP_595613.1 ProteinModelPortal:Q10282
STRING:Q10282 EnsemblFungi:SPBC32H8.07.1 GeneID:2539974
KEGG:spo:SPBC32H8.07 OrthoDB:EOG454D7D NextBio:20801117
GO:GO:0010619 GO:GO:0031138 Uniprot:Q10282
Length = 305
Score = 128 (50.1 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 36/124 (29%), Positives = 57/124 (45%)
Query: 18 DTHNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTG 77
+T ++ S+SF PS + G + IA +D+ + P S IN V +S +G
Sbjct: 189 NTSDINSISFFPSNADFVTGAEDGIARCFDIRASAEIFQYSSPSSS---PINSVLFSKSG 245
Query: 78 GMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWE 137
+ A KD +WD +S+ + S+ G H +S T D + + D V+LW
Sbjct: 246 KLLFIA-KDKTCEVWDSISSKTITSLTG-HEN-RISSLALTSDGTMLATGSWDECVRLWS 302
Query: 138 VSSG 141
SSG
Sbjct: 303 -SSG 305
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 130 (50.8 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 36/157 (22%), Positives = 70/157 (44%)
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
+ +V + + V+AS+D I++WD + + R++ G H T +F + + SC
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG-H-TDSVQDISFDHSGKLLASC 168
Query: 128 GKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE 187
D T+KLW+ ++ G H + A+ + + V + + + I +W+ T
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHN-VSSVAIMPNGDHIVSAARDKT--IKMWEVQTGY 225
Query: 188 KVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
V K + H R + + +C D++VR W
Sbjct: 226 CV-KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 129 (50.5 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 32/130 (24%), Positives = 61/130 (46%)
Query: 22 VRSVSFHPSGDFLLAGTDHPIAHLYDVNT--FQCYLSANVPEISVNGAINQVRYSSTGGM 79
V V FHP +++ ++ ++D T F+ L + ++ + + +G +
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD------SVQDISFDHSGKL 164
Query: 80 YVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVS 139
+ S D I+LWD C+R++ G H +S + ++S +D T+K+WEV
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHG-HDH-NVSSVAIMPNGDHIVSAARDKTIKMWEVQ 222
Query: 140 SGRLVKQYLG 149
+G VK + G
Sbjct: 223 TGYCVKTFTG 232
Score = 125 (49.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 31/122 (25%), Positives = 58/122 (47%)
Query: 19 THNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSSTGG 78
T +V+ +SF SG L + + L+D F+C + + + +V+ V G
Sbjct: 150 TDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS----VAIMPNGD 205
Query: 79 MYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEV 138
V+A++D I++W+ + CV++ G N +D + SC D TV++W V
Sbjct: 206 HIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN--QDGTLIASCSNDQTVRVWVV 263
Query: 139 SS 140
++
Sbjct: 264 AT 265
Score = 122 (48.0 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 50/221 (22%), Positives = 99/221 (44%)
Query: 20 HNVRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSAN-----VPEISVN--GA-INQV 71
HNV SV+ P+GD +++ +++V T C + V + N G I
Sbjct: 193 HNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASC 252
Query: 72 RYSSTGGMYVTASKD--GAIRLWDGVSANCVR-SIVGAHGT-AEATSANFTKDQR---FV 124
T ++V A+K+ +R + V C+ + ++ + +EAT + K + F+
Sbjct: 253 SNDQTVRVWVVATKECKAELREHEHV-VECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Query: 125 LSCGKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDAL 184
LS +D T+K+W+VS+G + +G H +F+ +F+LS + + +WD
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVG--HDNWVRGVLFHSGGKFILSCADDKT-LRVWDYK 368
Query: 185 TAEKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
++ K + H ++ +T D++V+ W+
Sbjct: 369 N-KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>TAIR|locus:2037798 [details] [associations]
symbol:PWP2 "AT1G15440" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0080008 HSSP:Q04724
HOGENOM:HOG000160363 KO:K14558 OMA:VWQCDTP InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003 EMBL:AY065425
EMBL:AY133789 IPI:IPI00543736 RefSeq:NP_172998.1 UniGene:At.28488
ProteinModelPortal:Q8VYZ5 SMR:Q8VYZ5 STRING:Q8VYZ5 PaxDb:Q8VYZ5
PRIDE:Q8VYZ5 EnsemblPlants:AT1G15440.1 GeneID:838115
KEGG:ath:AT1G15440 TAIR:At1g15440 InParanoid:Q8VYZ5
PhylomeDB:Q8VYZ5 ProtClustDB:CLSN2679476 ArrayExpress:Q8VYZ5
Genevestigator:Q8VYZ5 Uniprot:Q8VYZ5
Length = 900
Score = 134 (52.2 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 40/158 (25%), Positives = 65/158 (41%)
Query: 68 INQVRYSSTGGMYVTASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSC 127
+N V YS + T + D +++W+ +S C I T T+ +F D +LS
Sbjct: 392 VNCVTYSPDSQLLATGADDNKVKVWNVMSGTCF--ITFTEHTNAVTALHFMADNHSLLSA 449
Query: 128 GKDSTVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTE-EFVLSIDEPSNEIVIWDALTA 186
D TV+ W+ + K Y T T +F ++ D + V + S EI +W T
Sbjct: 450 SLDGTVRAWDFKRYKNYKTY--TTPTPRQFVSLTADPSGDVVCAGTLDSFEIFVWSKKTG 507
Query: 187 EKVAKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFW 224
+ + S H + SP + D +VR W
Sbjct: 508 Q-IKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLW 544
>TAIR|locus:2027749 [details] [associations]
symbol:SMU1 "AT1G73720" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002684 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 GO:GO:0080008
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 KO:K13111
OMA:NGHWDTV EMBL:AF462796 EMBL:AY102129 IPI:IPI00544131
RefSeq:NP_177513.2 UniGene:At.27865 ProteinModelPortal:Q8W117
SMR:Q8W117 IntAct:Q8W117 PaxDb:Q8W117 PRIDE:Q8W117
EnsemblPlants:AT1G73720.1 GeneID:843707 KEGG:ath:AT1G73720
TAIR:At1g73720 InParanoid:Q8W117 PhylomeDB:Q8W117
ProtClustDB:CLSN2690492 Genevestigator:Q8W117 Uniprot:Q8W117
Length = 511
Score = 131 (51.2 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 39/165 (23%), Positives = 74/165 (44%)
Query: 27 FHPSGDFLLAGTDHPIAHLYDV--NTFQCYLSANVPEISV--NGAINQVRYSSTGGMYVT 82
F P G FL + + ++D + L E + + + + +S M +
Sbjct: 221 FSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLAS 280
Query: 83 ASKDGAIRLWDGVSANCVRSIVGAHGTAEATSANFTKDQRFVLSCGKDSTVKLWEVSSGR 142
S+DG I++W + C+R AH TS +F++D +LS D T ++ + SG+
Sbjct: 281 GSQDGKIKIWRIRTGVCIRRF-DAHSQG-VTSLSFSRDGSQLLSTSFDQTARIHGLKSGK 338
Query: 143 LVKQYLGATHTQLRFQAVFNDTEEFVLSIDEPSNEIVIWDALTAE 187
L+K++ G HT A+F +++ + +WD+ T +
Sbjct: 339 LLKEFRG--HTSYVNHAIFTSDGSRIITASSDCT-VKVWDSKTTD 380
Score = 112 (44.5 bits), Expect = 0.00082, P = 0.00082
Identities = 48/216 (22%), Positives = 93/216 (43%)
Query: 18 DTHN--VRSVSFHPSGDFLLAGTDHPIAHLYDVNTFQCYLSANVPEISVNGAINQVRYSS 75
D H+ V S+SF G LL+ + A ++ + + + VN AI ++S
Sbjct: 302 DAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAI----FTS 357
Query: 76 TGGMYVTASKDGAIRLWDGVSANCVRSIVGA---HGT-AEATSAN-FTKDQRFVLSCGKD 130
G +TAS D +++WD + +C+++ GT A S + F K+ ++ C K
Sbjct: 358 DGSRIITASSDCTVKVWDSKTTDCLQTFKPPPPLRGTDASVNSIHLFPKNTEHIVVCNKT 417
Query: 131 STVKLWEVSSGRLVKQYLGATHTQLRFQAVFNDTE-EFVLSIDEPSNEIVIWDALTAEKV 189
S++ + + G++VK + F A T+ +++ I E ++ ++ + +
Sbjct: 418 SSIYIMTLQ-GQVVKSFSSGNREGGDFVAACVSTKGDWIYCIGE-DKKLYCFNYQSGG-L 474
Query: 190 AKWSSNHIGAPRWIEHSPAEAAFITCGTDRSVRFWK 225
+ H I H P T D +++ WK
Sbjct: 475 EHFMMVHEKDVIGITHHPHRNLLATYSEDCTMKLWK 510
WARNING: HSPs involving 392 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.132 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 228 228 0.00081 113 3 11 22 0.38 33
32 0.41 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 642
No. of states in DFA: 615 (65 KB)
Total size of DFA: 202 KB (2113 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.72u 0.10s 19.82t Elapsed: 00:00:01
Total cpu time: 19.78u 0.10s 19.88t Elapsed: 00:00:01
Start: Fri May 10 16:03:48 2013 End: Fri May 10 16:03:49 2013
WARNINGS ISSUED: 2