BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040374
(139 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9T039|EC14_ARATH Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4 PE=2
SV=1
Length = 127
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 83/129 (64%), Gaps = 11/129 (8%)
Query: 3 MALKHAFFILALTCLIMANIANATSRNDHLNNNMKLGYNLATRLEASGSLTECWNALMEL 62
MA F +T LI+ + N T L + N+A RL+ SG L ECWNAL EL
Sbjct: 1 MASNTTFLFSTVTLLII--LLNTTVSGRDLP--AESSTNIAARLQ-SGGLMECWNALYEL 55
Query: 63 KSCSNEIIIFFLNGQADIGPDCCRAIDIITRNCWPTMLTSLGFTAEEGNILRGYC----- 117
KSC+NEI++FFLNG+ +G CC ++DIIT NCWP MLTSLGFT EE N+LRG+C
Sbjct: 56 KSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAMLTSLGFTPEEANVLRGFCQNPNS 115
Query: 118 -DASSAPSP 125
D+S APSP
Sbjct: 116 GDSSPAPSP 124
>sp|Q9SJ24|EC12_ARATH Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2 PE=2
SV=1
Length = 125
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 78/117 (66%), Gaps = 7/117 (5%)
Query: 3 MALKHAFFILALTCLIMANIANATSRNDHLNNNMKLGYNLATRLEASGSLTECWNALMEL 62
MA +F + L++ NI+ T + N +A RL G L ECWNAL EL
Sbjct: 1 MASNTSFLFATIAILLVLNISGRTLPETEDSTN------IAARLNGGG-LMECWNALYEL 53
Query: 63 KSCSNEIIIFFLNGQADIGPDCCRAIDIITRNCWPTMLTSLGFTAEEGNILRGYCDA 119
KSC+NEI++FFLNG+ +G DCC+A+++IT +CWP MLTSLGFT++E N+LRG+C +
Sbjct: 54 KSCTNEIVLFFLNGETKLGVDCCQAVEVITTDCWPAMLTSLGFTSDETNVLRGFCQS 110
>sp|Q9SJ23|EC13_ARATH Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3 PE=2
SV=1
Length = 125
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 83/132 (62%), Gaps = 10/132 (7%)
Query: 3 MALKHAFFILALTCLIMANIANATSRNDHLNNNMKLGYNLATRLEASGSLTECWNALMEL 62
MA +F + +T L++ N+++ + N+A RL G L +CW+AL EL
Sbjct: 1 MASNTSFLFVTVTLLLVLNVSSRALPP------VADSTNIAARLTGGG-LMQCWDALYEL 53
Query: 63 KSCSNEIIIFFLNGQADIGPDCCRAIDIITRNCWPTMLTSLGFTAEEGNILRGYCDASSA 122
KSC+NEI++FFLNG+ +G CC A+D+IT +CWP MLTSLGFT EE N+LRG+C +
Sbjct: 54 KSCTNEIVLFFLNGETKLGYGCCNAVDVITTDCWPAMLTSLGFTLEETNVLRGFCQ---S 110
Query: 123 PSPGGPAVIYQP 134
P+ GG + P
Sbjct: 111 PNSGGSSPALSP 122
>sp|Q9SRD8|EC11_ARATH Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana GN=EC1.1 PE=2
SV=1
Length = 158
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 61/86 (70%)
Query: 41 NLATRLEASGSLTECWNALMELKSCSNEIIIFFLNGQADIGPDCCRAIDIITRNCWPTML 100
+L RL+ CW++LM+L+ CS E+I+FFLNG+ IGP CC AI I R CWPTM+
Sbjct: 43 SLVYRLKLDEDTGYCWDSLMQLQHCSGELILFFLNGETYIGPGCCSAIRTIGRKCWPTMI 102
Query: 101 TSLGFTAEEGNILRGYCDASSAPSPG 126
LGFTA+EG++L+GYCD + + + G
Sbjct: 103 GVLGFTAQEGDMLQGYCDGNDSDNNG 128
>sp|Q9FGG1|EC15_ARATH Egg cell-secreted protein 1.5 OS=Arabidopsis thaliana GN=EC1.5 PE=2
SV=1
Length = 155
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 61/107 (57%), Gaps = 13/107 (12%)
Query: 41 NLATRLEASGSLTECWNALMELKSCSNEIIIFFLNG--------QADIGPDCCRAIDIIT 92
+AT +G+L +CWNA +ELKSC++EI+ FFL+ + I DCC AI ++
Sbjct: 39 KMATDHSGAGNLMDCWNAGLELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAIGLVV 98
Query: 93 RNCWPTMLTSLGFTAEEGNILRGYCDASS-----APSPGGPAVIYQP 134
++CW M TSLG T EGN LR YC+ + +PSP + P
Sbjct: 99 KDCWSVMFTSLGLTTMEGNNLREYCEFQAEKSELSPSPAPETLALSP 145
>sp|Q04431|KRE28_YEAST Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=KRE28 PE=1 SV=1
Length = 385
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 8/37 (21%)
Query: 39 GYNLATR--------LEASGSLTECWNALMELKSCSN 67
G+N A R LEA+G + CW++L ELK+ +N
Sbjct: 162 GHNFAERQDLINELYLEATGDIENCWDSLNELKNLTN 198
>sp|Q92LA1|LEUD_RHIME 3-isopropylmalate dehydratase small subunit OS=Rhizobium meliloti
(strain 1021) GN=leuD PE=3 SV=1
Length = 201
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 54 ECWNALMELKS-CSNEIIIFFLNGQADIGPDCCR---AIDIITRNCWPTMLTSLGFTAEE 109
E + LM+ S SN I+ L Q GPD +D R+C L +G T E+
Sbjct: 124 EDLDKLMDDASRGSNAILTVDLEAQEITGPDGGSIKFEVDAFKRHCLLNGLDDIGLTLEK 183
Query: 110 GNILRGYCDASSAPSP 125
G + Y A++A P
Sbjct: 184 GGSIDNYEKATAASRP 199
>sp|Q47BL9|OTC_DECAR Ornithine carbamoyltransferase OS=Dechloromonas aromatica (strain
RCB) GN=argF PE=3 SV=1
Length = 306
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Query: 83 DCCRAIDIITRNCWPTMLTSLGFTAEEGNILRGYCD 118
D CR D++T + W TS+GF AE ++ + D
Sbjct: 209 DACRGADLVTTDVW----TSMGFEAENEERIKAFAD 240
>sp|C8Z692|KRE28_YEAS8 Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain Lalvin EC1118 / Prise de mousse) GN=KRE28 PE=3
SV=1
Length = 385
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 8/37 (21%)
Query: 39 GYNLATR--------LEASGSLTECWNALMELKSCSN 67
G+N A + LEA+G + CW++L ELK+ +N
Sbjct: 162 GHNFAEKQDLINELYLEATGDIENCWDSLNELKNLTN 198
>sp|A6ZZB9|KRE28_YEAS7 Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain YJM789) GN=KRE28 PE=3 SV=1
Length = 385
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 8/37 (21%)
Query: 39 GYNLATR--------LEASGSLTECWNALMELKSCSN 67
G+N A + LEA+G + CW++L ELK+ +N
Sbjct: 162 GHNFAEKQDLINELYLEATGDIENCWDSLNELKNLTN 198
>sp|B5VH51|KRE28_YEAS6 Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain AWRI1631) GN=KRE28 PE=3 SV=1
Length = 385
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 8/37 (21%)
Query: 39 GYNLATR--------LEASGSLTECWNALMELKSCSN 67
G+N A + LEA+G + CW++L ELK+ +N
Sbjct: 162 GHNFAEKQDLINELYLEATGDIENCWDSLNELKNLTN 198
>sp|C7GKW3|KRE28_YEAS2 Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain JAY291) GN=KRE28 PE=3 SV=1
Length = 385
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 8/37 (21%)
Query: 39 GYNLATR--------LEASGSLTECWNALMELKSCSN 67
G+N A + LEA+G + CW++L ELK+ +N
Sbjct: 162 GHNFAEKQDLINELYLEATGDIENCWDSLNELKNLTN 198
>sp|B3LFD9|KRE28_YEAS1 Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=KRE28 PE=3 SV=1
Length = 385
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 8/37 (21%)
Query: 39 GYNLATR--------LEASGSLTECWNALMELKSCSN 67
G+N A + LEA+G + CW++L ELK+ +N
Sbjct: 162 GHNFAEKQDLINELYLEATGDIENCWDSLNELKNLTN 198
>sp|O14057|GUAD_SCHPO Probable guanine deaminase OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=SPCC1672.03c PE=3 SV=1
Length = 527
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 79 DIGPDCCRAIDIITRNCWPTMLTSLGFTAEEGNI 112
D+ + +DI R+ WP ML+ FT+++ N+
Sbjct: 401 DLSAETHSCVDIFERDTWPVMLSKWVFTSDDRNL 434
>sp|Q5XVJ4|FAN1_ARATH Fanconi-associated nuclease 1 homolog OS=Arabidopsis thaliana
GN=At1g48360 PE=2 SV=2
Length = 891
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 17 LIMANIANATSRNDHLNNNMKLGYNLATRLEASGSLTECWNALMELKSCSNEII-----I 71
L M + + TSR L N++ YN TR+ + + E ++ S + +I +
Sbjct: 399 LSMNKVFSRTSRKRDLINSLCSCYNDGTRINLATVILERTGLCAKVSSTAESLIWRVERL 458
Query: 72 FFLNGQADI 80
FFLNG+ D+
Sbjct: 459 FFLNGEQDL 467
>sp|A1K7J9|OTC_AZOSB Ornithine carbamoyltransferase OS=Azoarcus sp. (strain BH72)
GN=arcB PE=3 SV=1
Length = 311
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Query: 83 DCCRAIDIITRNCWPTMLTSLGFTAEEGNILRGYCD 118
+ CR D++T + W TS+GF AE ++ + D
Sbjct: 210 EACRGADLVTTDVW----TSMGFEAENEARMKAFAD 241
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,607,669
Number of Sequences: 539616
Number of extensions: 1744141
Number of successful extensions: 3831
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 3817
Number of HSP's gapped (non-prelim): 20
length of query: 139
length of database: 191,569,459
effective HSP length: 104
effective length of query: 35
effective length of database: 135,449,395
effective search space: 4740728825
effective search space used: 4740728825
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)