BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 040376
         (100 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound
          Nadp
 pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound
          Nadp
          Length = 351

 Score = 42.4 bits (98), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)

Query: 3  GKPLMHAVQYNSYGGGAADLKHVELPVPTPSKDEVLLKLEATALNPVDWKIQKGQL--RP 60
          G+ LM AV+   +GG        ++ VP P   +VL+K+ A  +NPV+  I+ G    +P
Sbjct: 26 GQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKP 85

Query: 61 FLP 63
           LP
Sbjct: 86 LLP 88


>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
 pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
          Length = 343

 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/47 (44%), Positives = 29/47 (61%)

Query: 17 GGAADLKHVELPVPTPSKDEVLLKLEATALNPVDWKIQKGQLRPFLP 63
          GG   L+  +LPVP P   EV ++L+A ALN +D  ++KG   P LP
Sbjct: 10 GGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLP 56


>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella
          Burnetii
          Length = 321

 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 1/48 (2%)

Query: 9  AVQYNSYGGGAADLKHVELPVPTPSKDEVLLKLEATALNPVDWKIQKG 56
          A+Q++ +G     LK V+ P P   K++ L+K+ A +LNP+D+K + G
Sbjct: 9  AIQFDQFGPPKV-LKLVDTPTPEYRKNQXLIKVHAASLNPIDYKTRNG 55


>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol
          Dehydrogenase Protein From Rhizobium Etli Cfn 42
 pdb|4DVJ|B Chain B, Crystal Structure Of A Putative Zinc-Dependent Alcohol
          Dehydrogenase Protein From Rhizobium Etli Cfn 42
          Length = 363

 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/36 (38%), Positives = 28/36 (77%)

Query: 20 ADLKHVELPVPTPSKDEVLLKLEATALNPVDWKIQK 55
          A L  +ELP P P+  ++L++++A ++NPVD+K+++
Sbjct: 38 ASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRR 73


>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase
          ( Tp53i3,Pig3)
          Length = 354

 Score = 36.2 bits (82), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 27/44 (61%)

Query: 17 GGAADLKHVELPVPTPSKDEVLLKLEATALNPVDWKIQKGQLRP 60
          GG  +L   E+  P+P + EVLLK+ A+ALN  D   ++GQ  P
Sbjct: 32 GGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDP 75


>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase
          (Tp53i3,Pig3)
 pdb|2OBY|B Chain B, Crystal Structure Of Human P53 Inducible Oxidoreductase
          (Tp53i3,Pig3)
 pdb|2OBY|C Chain C, Crystal Structure Of Human P53 Inducible Oxidoreductase
          (Tp53i3,Pig3)
 pdb|2OBY|D Chain D, Crystal Structure Of Human P53 Inducible Oxidoreductase
          (Tp53i3,Pig3)
 pdb|2OBY|E Chain E, Crystal Structure Of Human P53 Inducible Oxidoreductase
          (Tp53i3,Pig3)
          Length = 338

 Score = 36.2 bits (82), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 27/44 (61%)

Query: 17 GGAADLKHVELPVPTPSKDEVLLKLEATALNPVDWKIQKGQLRP 60
          GG  +L   E+  P+P + EVLLK+ A+ALN  D   ++GQ  P
Sbjct: 16 GGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDP 59


>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase
          Superfamily Protein From Novosphingobium
          Aromaticivorans
 pdb|3GAZ|B Chain B, Crystal Structure Of An Alcohol Dehydrogenase
          Superfamily Protein From Novosphingobium
          Aromaticivorans
          Length = 343

 Score = 35.4 bits (80), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)

Query: 26 ELPVPTPSKDEVLLKLEATALNPVDWKIQKGQLRPFLPRKFPCIPG 71
          +L  P P+  +VL+++EA+  NP+D KI+ G+  P   +  P I G
Sbjct: 24 KLARPQPAPGQVLVQIEASGTNPLDAKIRAGE-APHAQQPLPAILG 68


>pdb|3IUP|A Chain A, Crystal Structure Of Putative Nadph:quinone
          Oxidoreductase (Yp_296108.1) From Ralstonia Eutropha
          Jmp134 At 1.70 A Resolution
 pdb|3IUP|B Chain B, Crystal Structure Of Putative Nadph:quinone
          Oxidoreductase (Yp_296108.1) From Ralstonia Eutropha
          Jmp134 At 1.70 A Resolution
          Length = 379

 Score = 33.1 bits (74), Expect = 0.041,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 18 GAADLKHVELPVPTPSKDEVLLKLEATALNPVD 50
          G  +L    +  P P  DEVL+++EA+ LNP D
Sbjct: 16 GELELSLDSIDTPHPGPDEVLIRIEASPLNPSD 48


>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
          44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
 pdb|2XAA|B Chain B, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
          44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
 pdb|2XAA|C Chain C, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
          44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
 pdb|2XAA|D Chain D, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
          44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
 pdb|3JV7|A Chain A, Structure Of Adh-A From Rhodococcus Ruber
 pdb|3JV7|B Chain B, Structure Of Adh-A From Rhodococcus Ruber
 pdb|3JV7|C Chain C, Structure Of Adh-A From Rhodococcus Ruber
 pdb|3JV7|D Chain D, Structure Of Adh-A From Rhodococcus Ruber
          Length = 345

 Score = 32.7 bits (73), Expect = 0.048,   Method: Composition-based stats.
 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 3/40 (7%)

Query: 7  MHAVQYNSYGGGAADLKHVELPVPTPSKDEVLLKLEATAL 46
          M AVQY   G   ++   V++P PTP   E+LLK+ A  L
Sbjct: 1  MKAVQYTEIG---SEPVVVDIPTPTPGPGEILLKVTAAGL 37


>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily
          Protein (np_718042.1) From Shewanella Oneidensis At
          1.55 A Resolution
          Length = 315

 Score = 32.3 bits (72), Expect = 0.075,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 19/28 (67%)

Query: 29 VPTPSKDEVLLKLEATALNPVDWKIQKG 56
          +P  + D++L++ +A  +NPVDWK  K 
Sbjct: 24 IPALAADDILVQNQAIGINPVDWKFIKA 51


>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
          Dehydrogenase With Its Coenzyme And Weak Substrate
 pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
          Dehydrogenase With Its Coenzyme And Weak Substrate
 pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
          Dehydrogenase With Its Coenzyme And Weak Substrate
 pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
          Dehydrogenase With Its Coenzyme And Weak Substrate
 pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
          Dehydrogenase With Its Coenzyme And Weak Substrate
 pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
          Dehydrogenase With Its Coenzyme And Weak Substrate
 pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
          Dehydrogenase With Its Coenzyme And Weak Substrate
 pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
          Dehydrogenase With Its Coenzyme And Weak Substrate
          Length = 342

 Score = 32.0 bits (71), Expect = 0.088,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 5/65 (7%)

Query: 7  MHAVQYNSYGGGAADLKHVELPVPTPSKDEVLLKLEATALNPVDWKIQKGQLRPFLPRKF 66
          M A   ++YG   A L+  E+ VP P   +VL+K+EA+ +   D    +G   P  P   
Sbjct: 7  MKAAVVHAYG---APLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDW-PVKP-PL 61

Query: 67 PCIPG 71
          P IPG
Sbjct: 62 PFIPG 66


>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From
          Staphylococcus Haemolyticus
 pdb|3FBG|B Chain B, Crystal Structure Of A Putative Arginate Lyase From
          Staphylococcus Haemolyticus
          Length = 346

 Score = 31.6 bits (70), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 20/31 (64%)

Query: 22 LKHVELPVPTPSKDEVLLKLEATALNPVDWK 52
           K   L +P P   E+L+K+++ ++NPVD K
Sbjct: 20 FKTFNLDIPEPKVHEILVKIQSISVNPVDTK 50


>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
          Protein Vat-1 Homolog-Like Protein
 pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
          Protein Vat-1 Homolog-Like Protein
          Length = 349

 Score = 31.2 bits (69), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 3/65 (4%)

Query: 7  MHAVQYNSYGGGAADLKHVELPVPTPSKDEVLLKLEATALNPVDWKIQKGQLRPFLPRKF 66
          M AV    +GG    L+     +P P   E+ ++++A  LN +D  +++G +    P K 
Sbjct: 4  MRAVVLAGFGG-LNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDN--PPKT 60

Query: 67 PCIPG 71
          P +PG
Sbjct: 61 PLVPG 65


>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
          Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
 pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
          Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
 pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
          Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
          Complexed With Nadph
 pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
          Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
          Complexed With Nadph
 pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
          Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
          Complexed With Nadph
 pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
          Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
          Complexed With Nadph
          Length = 334

 Score = 30.8 bits (68), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 27/40 (67%)

Query: 17 GGAADLKHVELPVPTPSKDEVLLKLEATALNPVDWKIQKG 56
          GG   +K+ + PVP+ S++E+L+K + T +N ++   +KG
Sbjct: 18 GGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKG 57


>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx
 pdb|3S1L|B Chain B, Crystal Structure Of Apo-Form Furx
 pdb|3S1L|C Chain C, Crystal Structure Of Apo-Form Furx
 pdb|3S1L|D Chain D, Crystal Structure Of Apo-Form Furx
 pdb|3S2E|A Chain A, Crystal Structure Of Furx Nadh Complex 1
 pdb|3S2E|B Chain B, Crystal Structure Of Furx Nadh Complex 1
 pdb|3S2E|C Chain C, Crystal Structure Of Furx Nadh Complex 1
 pdb|3S2E|D Chain D, Crystal Structure Of Furx Nadh Complex 1
 pdb|3S2E|E Chain E, Crystal Structure Of Furx Nadh Complex 1
 pdb|3S2E|F Chain F, Crystal Structure Of Furx Nadh Complex 1
 pdb|3S2E|G Chain G, Crystal Structure Of Furx Nadh Complex 1
 pdb|3S2E|H Chain H, Crystal Structure Of Furx Nadh Complex 1
 pdb|3S2F|A Chain A, Crystal Structure Of Furx Nadh:furfural
 pdb|3S2F|B Chain B, Crystal Structure Of Furx Nadh:furfural
 pdb|3S2F|C Chain C, Crystal Structure Of Furx Nadh:furfural
 pdb|3S2F|D Chain D, Crystal Structure Of Furx Nadh:furfural
 pdb|3S2F|E Chain E, Crystal Structure Of Furx Nadh:furfural
 pdb|3S2F|F Chain F, Crystal Structure Of Furx Nadh:furfural
 pdb|3S2F|G Chain G, Crystal Structure Of Furx Nadh:furfural
 pdb|3S2F|H Chain H, Crystal Structure Of Furx Nadh:furfural
 pdb|3S2G|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
 pdb|3S2G|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
 pdb|3S2G|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
 pdb|3S2G|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
 pdb|3S2G|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
 pdb|3S2G|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
 pdb|3S2G|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
 pdb|3S2G|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
 pdb|3S2I|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
 pdb|3S2I|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
 pdb|3S2I|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
 pdb|3S2I|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
 pdb|3S2I|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
 pdb|3S2I|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
 pdb|3S2I|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
 pdb|3S2I|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
          Length = 340

 Score = 30.8 bits (68), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 5/66 (7%)

Query: 6  LMHAVQYNSYGGGAADLKHVELPVPTPSKDEVLLKLEATALNPVDWKIQKGQLRPFLPRK 65
          +M A    ++G   A L   E+PVP P   +V +K+EA+ +   D     G   P  P  
Sbjct: 2  MMKAAVVRAFG---APLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDW-PVKP-T 56

Query: 66 FPCIPG 71
           P IPG
Sbjct: 57 LPFIPG 62


>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus
          Tokodaii Strain7
 pdb|2EER|B Chain B, Structural Study Of Project Id St2577 From Sulfolobus
          Tokodaii Strain7
          Length = 347

 Score = 30.4 bits (67), Expect = 0.29,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 23/37 (62%)

Query: 22 LKHVELPVPTPSKDEVLLKLEATALNPVDWKIQKGQL 58
          LK  ++P+P P   +VL+K+EA  +   D  +++G+ 
Sbjct: 13 LKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRF 49


>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase
          Length = 355

 Score = 30.0 bits (66), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 5/51 (9%)

Query: 18 GAADLKHVELPVPTPSKDEVLLKLEATALNPVD---WKIQKGQLRPFLPRK 65
          G  DL+    P+P P  +EVLLK+ +  +   D   W  Q G++  F+ +K
Sbjct: 14 GPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYW--QHGRIGDFVVKK 62


>pdb|3PI7|A Chain A, Crystal Structure Of A Putative Nadph:quinone Reductase
          (Mll3093) From Mesorhizobium Loti At 1.71 A Resolution
          Length = 349

 Score = 29.6 bits (65), Expect = 0.41,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 22 LKHVELPVPTPSKDEVLLKLEATALNPVDWKIQKGQ 57
          L+   + VP P   +VL+K+   ++NP D    KGQ
Sbjct: 37 LEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQ 72


>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase
 pdb|2DQ4|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase
 pdb|2EJV|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
          With Nad+
 pdb|2EJV|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
          With Nad+
          Length = 343

 Score = 29.6 bits (65), Expect = 0.42,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 6/47 (12%)

Query: 22 LKHVELPVPTPSKDEVLLKLEATALNPVDWKIQK------GQLRPFL 62
          L  V+ PVP P   E+L+++EA ++   D  I K      G++RP L
Sbjct: 13 LTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPL 59


>pdb|3B6Z|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Complexed
          With 2'- Phosphoadenosyl Isomer Of Crotonoyl-Coa
 pdb|3B70|A Chain A, Crystal Structure Of Aspergillus Terreus Trans-Acting
          Lovastatin Polyketide Enoyl Reductase (Lovc) With Bound
          Nadp
          Length = 371

 Score = 29.3 bits (64), Expect = 0.55,   Method: Composition-based stats.
 Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 1/31 (3%)

Query: 28 PVPTPSKDEVLLKLEATALNPVDWKIQKGQL 58
          P P   +D+V +++EA A+NP D K+ +GQ 
Sbjct: 30 PCPMLPRDQVYVRVEAVAINPSDTKM-RGQF 59


>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
          Fermentative Enzyme
 pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
          Fermentative Enzyme
 pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
          Fermentative Enzyme
 pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
          Fermentative Enzyme
          Length = 347

 Score = 29.3 bits (64), Expect = 0.61,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 6/60 (10%)

Query: 12 YNSYGGGAADLKHVELPVPTPSKDEVLLKLEATALNPVDWKIQKGQLRPFLPRKFPCIPG 71
          Y S+G     L++ ++PVP P  +E+L+ ++ + +   D     G     LP K P + G
Sbjct: 12 YESHG----KLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWP--LPVKLPLVGG 65


>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From
          Silverleaf Whitefly
          Length = 352

 Score = 27.7 bits (60), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/21 (47%), Positives = 16/21 (76%)

Query: 21 DLKHVELPVPTPSKDEVLLKL 41
          DL+  + P+P P +DEVLL++
Sbjct: 15 DLRLEQRPIPEPKEDEVLLQM 35


>pdb|3GQV|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant K54s
          With Bound Nadp
          Length = 371

 Score = 27.3 bits (59), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)

Query: 28 PVPTPSKDEVLLKLEATALNPVDWKIQKGQL 58
          P P   +D+V +++EA A+NP D  + +GQ 
Sbjct: 30 PCPMLPRDQVYVRVEAVAINPSDTSM-RGQF 59


>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo)
 pdb|1PL7|B Chain B, Human Sorbitol Dehydrogenase (Apo)
 pdb|1PL7|C Chain C, Human Sorbitol Dehydrogenase (Apo)
 pdb|1PL7|D Chain D, Human Sorbitol Dehydrogenase (Apo)
 pdb|1PL8|A Chain A, Human SdhNAD+ COMPLEX
 pdb|1PL8|B Chain B, Human SdhNAD+ COMPLEX
 pdb|1PL8|C Chain C, Human SdhNAD+ COMPLEX
 pdb|1PL8|D Chain D, Human SdhNAD+ COMPLEX
          Length = 356

 Score = 26.9 bits (58), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 5/51 (9%)

Query: 18 GAADLKHVELPVPTPSKDEVLLKLEATALNPVD---WKIQKGQLRPFLPRK 65
          G  DL+    P+P P  +EVLL++ +  +   D   W  + G++  F+ +K
Sbjct: 15 GPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYW--EYGRIGNFIVKK 63


>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From
          Pyrococcus Horikoshii
 pdb|2DFV|B Chain B, Hyperthermophilic Threonine Dehydrogenase From
          Pyrococcus Horikoshii
 pdb|2DFV|C Chain C, Hyperthermophilic Threonine Dehydrogenase From
          Pyrococcus Horikoshii
          Length = 347

 Score = 26.6 bits (57), Expect = 4.2,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 18/29 (62%)

Query: 25 VELPVPTPSKDEVLLKLEATALNPVDWKI 53
          VE+ VP P   EVL+K+ AT++   D  I
Sbjct: 19 VEVDVPKPGPGEVLIKVLATSICGTDLHI 47


>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii
          Ot3
          Length = 348

 Score = 26.6 bits (57), Expect = 4.2,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 18/29 (62%)

Query: 25 VELPVPTPSKDEVLLKLEATALNPVDWKI 53
          VE+ VP P   EVL+K+ AT++   D  I
Sbjct: 20 VEVDVPKPGPGEVLIKVLATSICGTDLHI 48


>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX
 pdb|1PL6|B Chain B, Human SdhNADHINHIBITOR COMPLEX
 pdb|1PL6|C Chain C, Human SdhNADHINHIBITOR COMPLEX
 pdb|1PL6|D Chain D, Human SdhNADHINHIBITOR COMPLEX
          Length = 356

 Score = 25.8 bits (55), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 5/51 (9%)

Query: 18 GAADLKHVELPVPTPSKDEVLLKLEATALNPVD---WKIQKGQLRPFLPRK 65
          G  DL+    P+P P  +EVLL+  +  +   D   W  + G++  F+ +K
Sbjct: 15 GPGDLRLENYPIPEPGPNEVLLRXHSVGICGSDVHYW--EYGRIGNFIVKK 63


>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The
          Hyperthermophilic Archaeon Thermococcus Kodakaraensis
 pdb|3GFB|B Chain B, L-Threonine Dehydrogenase (Tktdh) From The
          Hyperthermophilic Archaeon Thermococcus Kodakaraensis
 pdb|3GFB|C Chain C, L-Threonine Dehydrogenase (Tktdh) From The
          Hyperthermophilic Archaeon Thermococcus Kodakaraensis
 pdb|3GFB|D Chain D, L-Threonine Dehydrogenase (Tktdh) From The
          Hyperthermophilic Archaeon Thermococcus Kodakaraensis
          Length = 350

 Score = 25.8 bits (55), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 13/29 (44%), Positives = 18/29 (62%)

Query: 25 VELPVPTPSKDEVLLKLEATALNPVDWKI 53
          VE+ VP P   EVL+K+ AT++   D  I
Sbjct: 20 VEVDVPKPGPGEVLIKVLATSICGTDLHI 48


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.322    0.142    0.453 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,313,452
Number of Sequences: 62578
Number of extensions: 125464
Number of successful extensions: 232
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 204
Number of HSP's gapped (non-prelim): 30
length of query: 100
length of database: 14,973,337
effective HSP length: 66
effective length of query: 34
effective length of database: 10,843,189
effective search space: 368668426
effective search space used: 368668426
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 45 (21.9 bits)