Query 040384
Match_columns 224
No_of_seqs 265 out of 1715
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 12:29:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040384.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040384hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fi2_A Oxalate oxidase, germin 100.0 9E-50 3.1E-54 333.9 21.1 194 23-217 1-200 (201)
2 3kgl_A Cruciferin; 11S SEED gl 100.0 2E-34 6.9E-39 267.4 17.2 152 65-220 296-450 (466)
3 3ksc_A LEGA class, prolegumin; 100.0 1.7E-33 5.9E-38 262.8 19.2 160 59-223 323-487 (496)
4 3qac_A 11S globulin SEED stora 100.0 1.1E-33 3.7E-38 262.4 15.6 153 64-220 295-450 (465)
5 2e9q_A 11S globulin subunit be 100.0 8.8E-33 3E-37 256.7 16.5 155 64-223 294-451 (459)
6 3fz3_A Prunin; TREE NUT allerg 100.0 6.3E-33 2.1E-37 259.4 15.1 161 59-223 359-524 (531)
7 2cav_A Protein (canavalin); vi 100.0 4.6E-32 1.6E-36 251.2 17.1 163 54-221 243-420 (445)
8 1uij_A Beta subunit of beta co 100.0 1.1E-31 3.8E-36 246.9 16.8 162 54-220 211-390 (416)
9 2ea7_A 7S globulin-1; beta bar 100.0 5.2E-31 1.8E-35 243.5 17.0 163 53-220 227-406 (434)
10 3s7i_A Allergen ARA H 1, clone 100.0 2.9E-31 9.9E-36 244.0 14.6 159 56-220 226-415 (418)
11 3c3v_A Arachin ARAH3 isoform; 100.0 2E-30 6.7E-35 243.1 19.0 155 64-223 344-501 (510)
12 1fxz_A Glycinin G1; proglycini 100.0 4.3E-30 1.5E-34 239.6 18.9 155 64-223 310-467 (476)
13 2d5f_A Glycinin A3B4 subunit; 100.0 2.2E-30 7.6E-35 242.4 16.3 154 64-223 339-493 (493)
14 1dgw_A Canavalin; duplicated s 100.0 8.5E-30 2.9E-34 209.3 14.8 159 57-222 3-176 (178)
15 2phl_A Phaseolin; plant SEED s 100.0 3E-28 1E-32 222.6 15.0 150 60-220 213-378 (397)
16 2e9q_A 11S globulin subunit be 100.0 2.8E-28 9.7E-33 226.4 14.5 148 70-222 42-244 (459)
17 3ksc_A LEGA class, prolegumin; 100.0 8.5E-28 2.9E-32 224.4 14.5 148 71-223 26-228 (496)
18 3qac_A 11S globulin SEED stora 99.9 8.8E-28 3E-32 222.8 13.9 149 70-223 29-247 (465)
19 1fxz_A Glycinin G1; proglycini 99.9 2.1E-27 7.2E-32 221.5 13.6 148 70-222 27-238 (476)
20 2phl_A Phaseolin; plant SEED s 99.9 4.5E-27 1.5E-31 214.9 14.3 164 55-223 11-195 (397)
21 2cav_A Protein (canavalin); vi 99.9 2.4E-26 8.2E-31 212.9 15.8 163 55-222 46-221 (445)
22 1uij_A Beta subunit of beta co 99.9 2E-26 7E-31 211.9 14.3 162 56-222 9-189 (416)
23 2ea7_A 7S globulin-1; beta bar 99.9 2.3E-26 8E-31 212.4 14.7 163 55-222 20-206 (434)
24 2d5f_A Glycinin A3B4 subunit; 99.9 1.3E-26 4.4E-31 217.0 13.1 147 71-222 25-239 (493)
25 3fz3_A Prunin; TREE NUT allerg 99.9 1.8E-26 6.1E-31 215.9 13.8 150 69-223 26-307 (531)
26 3kgl_A Cruciferin; 11S SEED gl 99.9 3.9E-26 1.3E-30 211.9 13.6 149 70-223 22-255 (466)
27 3c3v_A Arachin ARAH3 isoform; 99.9 7.2E-26 2.5E-30 212.2 14.3 149 70-223 27-281 (510)
28 3s7i_A Allergen ARA H 1, clone 99.9 1.1E-25 3.6E-30 207.0 14.0 151 56-213 5-170 (418)
29 2vqa_A SLL1358 protein, MNCA; 99.9 2.1E-24 7.3E-29 193.3 18.4 157 50-213 194-351 (361)
30 2vqa_A SLL1358 protein, MNCA; 99.9 9E-22 3.1E-26 176.2 16.9 151 57-214 20-173 (361)
31 1j58_A YVRK protein; cupin, de 99.8 2.8E-19 9.5E-24 161.6 17.5 153 54-213 222-374 (385)
32 1j58_A YVRK protein; cupin, de 99.8 9.5E-20 3.3E-24 164.7 12.9 147 58-212 48-196 (385)
33 1dgw_X Canavalin; duplicated s 99.8 1.9E-20 6.6E-25 134.6 5.2 74 60-134 4-78 (79)
34 3h8u_A Uncharacterized conserv 99.5 1.6E-13 5.4E-18 104.5 10.1 84 91-178 38-121 (125)
35 2xlg_A SLL1785 protein, CUCA; 99.5 1.5E-13 5E-18 117.7 9.8 83 88-170 39-137 (239)
36 3l2h_A Putative sugar phosphat 99.5 8.4E-13 2.9E-17 105.2 12.6 81 91-176 45-127 (162)
37 1lr5_A Auxin binding protein 1 99.4 2E-12 6.7E-17 103.3 13.9 114 91-209 40-158 (163)
38 1v70_A Probable antibiotics sy 99.4 1.4E-12 4.6E-17 94.8 11.2 79 88-171 24-102 (105)
39 1x82_A Glucose-6-phosphate iso 99.4 7.7E-12 2.6E-16 103.1 15.5 100 73-173 49-156 (190)
40 2fqp_A Hypothetical protein BP 99.4 1.4E-12 4.9E-17 95.5 9.4 77 90-169 16-92 (97)
41 3ibm_A Cupin 2, conserved barr 99.4 1.7E-11 5.9E-16 99.0 15.2 116 51-173 12-132 (167)
42 3i7d_A Sugar phosphate isomera 99.4 5.9E-12 2E-16 101.2 12.1 81 91-176 42-125 (163)
43 2gu9_A Tetracenomycin polyketi 99.4 6.4E-12 2.2E-16 92.9 11.2 79 89-172 18-98 (113)
44 2oa2_A BH2720 protein; 1017534 99.3 5.5E-12 1.9E-16 99.3 10.5 84 90-173 41-125 (148)
45 3lag_A Uncharacterized protein 99.3 9.8E-13 3.4E-17 97.5 5.5 79 89-169 14-92 (98)
46 3ht1_A REMF protein; cupin fol 99.3 1.3E-11 4.6E-16 95.5 11.8 84 90-177 37-120 (145)
47 4e2g_A Cupin 2 conserved barre 99.3 7.5E-12 2.6E-16 95.1 8.9 78 89-173 38-115 (126)
48 3fjs_A Uncharacterized protein 99.3 1.5E-11 5.1E-16 93.0 10.4 77 88-170 32-108 (114)
49 1o4t_A Putative oxalate decarb 99.3 1.5E-11 5E-16 95.3 10.6 77 89-170 54-130 (133)
50 3es1_A Cupin 2, conserved barr 99.3 1.1E-11 3.6E-16 101.2 9.3 80 90-175 77-156 (172)
51 3kgz_A Cupin 2 conserved barre 99.3 2.4E-11 8.2E-16 97.3 10.8 78 90-173 42-119 (156)
52 3jzv_A Uncharacterized protein 99.3 2.8E-11 9.5E-16 97.9 10.8 78 90-173 51-128 (166)
53 2b8m_A Hypothetical protein MJ 99.3 2.9E-11 9.8E-16 90.9 10.0 73 91-169 26-99 (117)
54 1dgw_Y Canavalin; duplicated s 99.3 4.6E-11 1.6E-15 87.9 10.6 80 134-218 4-87 (93)
55 2pfw_A Cupin 2, conserved barr 99.3 4.8E-11 1.6E-15 89.2 10.8 75 91-173 33-107 (116)
56 2bnm_A Epoxidase; oxidoreducta 99.2 6.1E-11 2.1E-15 97.0 12.1 82 87-170 112-197 (198)
57 2o8q_A Hypothetical protein; c 99.2 5.8E-11 2E-15 91.3 10.7 78 91-174 42-120 (134)
58 4i4a_A Similar to unknown prot 99.2 5.9E-11 2E-15 90.3 10.6 75 90-170 32-106 (128)
59 2ozi_A Hypothetical protein RP 99.2 1.1E-11 3.9E-16 91.9 6.4 77 91-169 16-92 (98)
60 1vj2_A Novel manganese-contain 99.2 3.5E-11 1.2E-15 92.1 9.3 77 89-171 45-121 (126)
61 3cew_A Uncharacterized cupin p 99.2 2.8E-11 9.5E-16 92.1 8.7 78 89-171 23-101 (125)
62 2f4p_A Hypothetical protein TM 99.2 9.8E-11 3.4E-15 92.3 11.5 77 90-172 46-123 (147)
63 1rc6_A Hypothetical protein YL 99.2 7.2E-11 2.5E-15 101.3 10.4 78 89-171 176-254 (261)
64 1yhf_A Hypothetical protein SP 99.2 2.2E-10 7.6E-15 85.3 10.9 74 89-170 37-110 (115)
65 2d40_A Z3393, putative gentisa 99.1 2.5E-10 8.6E-15 102.6 12.0 90 72-171 249-339 (354)
66 1y9q_A Transcriptional regulat 99.1 1.8E-10 6.2E-15 93.9 10.1 77 88-171 100-178 (192)
67 2vpv_A Protein MIF2, MIF2P; nu 99.1 1.9E-10 6.5E-15 93.3 10.0 74 91-169 87-161 (166)
68 2q30_A Uncharacterized protein 99.1 2.5E-10 8.7E-15 84.0 9.3 77 89-171 30-107 (110)
69 3h7j_A Bacilysin biosynthesis 99.1 3.9E-10 1.3E-14 95.8 10.7 79 91-175 144-223 (243)
70 1y3t_A Hypothetical protein YX 99.1 5.3E-10 1.8E-14 98.1 11.9 79 90-174 44-122 (337)
71 2d40_A Z3393, putative gentisa 99.1 2.1E-10 7.1E-15 103.1 9.4 76 91-171 99-174 (354)
72 3lwc_A Uncharacterized protein 99.1 5.6E-10 1.9E-14 85.4 9.9 73 91-171 39-111 (119)
73 1sef_A Conserved hypothetical 99.1 1.1E-09 3.8E-14 94.7 12.8 76 90-171 180-257 (274)
74 2ozj_A Cupin 2, conserved barr 99.1 1.6E-09 5.5E-14 80.8 11.2 71 91-169 37-107 (114)
75 1y3t_A Hypothetical protein YX 99.0 2.6E-09 9E-14 93.7 13.2 75 94-174 219-294 (337)
76 1juh_A Quercetin 2,3-dioxygena 99.0 1.4E-09 4.8E-14 97.4 11.5 81 91-173 47-130 (350)
77 2i45_A Hypothetical protein; n 99.0 1E-09 3.5E-14 81.1 8.3 66 94-167 30-96 (107)
78 3d82_A Cupin 2, conserved barr 99.0 2E-09 6.7E-14 78.1 8.8 64 88-160 29-92 (102)
79 3bu7_A Gentisate 1,2-dioxygena 99.0 2.8E-09 9.7E-14 97.1 11.3 78 89-171 120-198 (394)
80 3h7j_A Bacilysin biosynthesis 99.0 2.1E-09 7.1E-14 91.3 9.8 74 92-171 34-108 (243)
81 1sfn_A Conserved hypothetical 99.0 6.6E-09 2.3E-13 88.6 12.9 77 89-171 162-239 (246)
82 2pyt_A Ethanolamine utilizatio 99.0 2.5E-09 8.4E-14 83.4 9.0 71 91-171 56-126 (133)
83 3bu7_A Gentisate 1,2-dioxygena 99.0 9.7E-09 3.3E-13 93.5 14.3 75 91-171 293-368 (394)
84 2opk_A Hypothetical protein; p 99.0 4.1E-09 1.4E-13 79.3 9.9 80 88-171 27-109 (112)
85 3nw4_A Gentisate 1,2-dioxygena 99.0 1.8E-09 6.1E-14 97.6 9.1 78 90-172 101-178 (368)
86 1sq4_A GLXB, glyoxylate-induce 98.9 2.3E-09 7.9E-14 93.2 9.2 77 89-171 65-143 (278)
87 1rc6_A Hypothetical protein YL 98.9 3.1E-09 1.1E-13 91.1 9.2 77 90-171 57-134 (261)
88 4h7l_A Uncharacterized protein 98.9 5.9E-09 2E-13 83.7 10.1 70 92-172 47-118 (157)
89 3rns_A Cupin 2 conserved barre 98.9 6.2E-09 2.1E-13 87.6 9.1 71 91-168 152-222 (227)
90 1sq4_A GLXB, glyoxylate-induce 98.9 1.2E-08 4.1E-13 88.7 10.6 82 85-172 184-266 (278)
91 1vr3_A Acireductone dioxygenas 98.9 2.6E-08 9E-13 82.3 11.9 79 93-172 75-163 (191)
92 1sef_A Conserved hypothetical 98.8 6.9E-09 2.4E-13 89.7 8.3 77 90-171 60-137 (274)
93 4axo_A EUTQ, ethanolamine util 98.8 1.8E-08 6E-13 80.4 9.7 71 91-171 65-135 (151)
94 4e2q_A Ureidoglycine aminohydr 98.8 4.8E-08 1.6E-12 84.6 12.9 77 89-171 183-260 (266)
95 4b29_A Dimethylsulfoniopropion 98.8 2.4E-08 8.2E-13 83.9 9.5 78 88-171 128-205 (217)
96 3rns_A Cupin 2 conserved barre 98.8 2.1E-08 7.3E-13 84.3 9.2 74 89-170 34-107 (227)
97 4e2q_A Ureidoglycine aminohydr 98.8 2.7E-08 9.3E-13 86.2 9.6 104 50-170 37-141 (266)
98 1o5u_A Novel thermotoga mariti 98.7 6.7E-08 2.3E-12 71.8 7.8 63 96-165 35-97 (101)
99 1zrr_A E-2/E-2' protein; nicke 98.7 1.5E-08 5.2E-13 82.9 4.6 66 105-172 93-158 (179)
100 3bcw_A Uncharacterized protein 98.6 8.1E-08 2.8E-12 73.9 6.9 73 91-170 48-120 (123)
101 3ebr_A Uncharacterized RMLC-li 98.6 3.5E-07 1.2E-11 73.4 10.1 73 91-171 41-115 (159)
102 2y0o_A Probable D-lyxose ketol 98.6 3.7E-07 1.3E-11 74.4 10.2 81 91-175 52-156 (175)
103 2q1z_B Anti-sigma factor CHRR, 98.5 2.7E-07 9.2E-12 76.2 8.8 71 91-171 124-194 (195)
104 1sfn_A Conserved hypothetical 98.5 2.5E-07 8.5E-12 78.7 8.5 71 90-170 48-118 (246)
105 1juh_A Quercetin 2,3-dioxygena 98.5 6.6E-07 2.3E-11 80.0 11.2 80 85-171 242-325 (350)
106 3st7_A Capsular polysaccharide 98.5 4.5E-07 1.5E-11 80.1 9.9 84 93-178 273-365 (369)
107 3eqe_A Putative cystein deoxyg 98.5 1.7E-06 5.7E-11 70.2 12.3 85 91-175 68-156 (171)
108 3nw4_A Gentisate 1,2-dioxygena 98.4 1.5E-06 5.1E-11 78.4 11.5 89 73-171 260-350 (368)
109 1yfu_A 3-hydroxyanthranilate-3 98.4 2E-06 7E-11 69.7 10.9 60 99-160 42-101 (174)
110 3d0j_A Uncharacterized protein 98.4 1.1E-06 3.7E-11 68.9 8.7 67 101-169 38-107 (140)
111 2o1q_A Putative acetyl/propion 98.4 3.7E-07 1.3E-11 71.8 5.6 77 91-174 43-121 (145)
112 3cjx_A Protein of unknown func 98.3 1.3E-06 4.5E-11 70.4 8.1 74 91-171 42-117 (165)
113 2gm6_A Cysteine dioxygenase ty 98.3 5.3E-06 1.8E-10 69.2 11.7 81 91-172 78-167 (208)
114 1zvf_A 3-hydroxyanthranilate 3 98.2 8.3E-06 2.8E-10 66.1 9.8 59 100-160 42-104 (176)
115 2arc_A ARAC, arabinose operon 98.2 1.1E-05 3.8E-10 62.5 10.0 60 106-171 32-93 (164)
116 2qnk_A 3-hydroxyanthranilate 3 98.1 1.3E-05 4.5E-10 69.4 10.3 56 104-161 43-98 (286)
117 3eln_A Cysteine dioxygenase ty 98.1 4.8E-05 1.6E-09 63.1 13.1 85 91-175 69-162 (200)
118 3bal_A Acetylacetone-cleaving 98.1 4.3E-06 1.5E-10 66.7 5.5 77 71-157 30-107 (153)
119 3o14_A Anti-ecfsigma factor, C 98.0 2.4E-05 8.1E-10 65.9 9.8 69 91-171 42-110 (223)
120 1yud_A Hypothetical protein SO 97.8 0.00052 1.8E-08 55.4 13.7 132 70-211 26-165 (170)
121 2pa7_A DTDP-6-deoxy-3,4-keto-h 97.8 0.00048 1.6E-08 54.0 12.7 94 72-170 16-112 (141)
122 3ejk_A DTDP sugar isomerase; Y 97.8 0.00027 9.3E-09 57.3 11.3 73 99-171 60-141 (174)
123 3myx_A Uncharacterized protein 97.7 0.00018 6.3E-09 61.1 9.8 72 91-171 46-117 (238)
124 3uss_A Putative uncharacterize 97.7 0.00065 2.2E-08 56.7 12.6 82 91-173 72-162 (211)
125 3es4_A Uncharacterized protein 97.6 0.00025 8.5E-09 53.9 8.1 63 92-160 42-104 (116)
126 3myx_A Uncharacterized protein 97.5 0.00069 2.4E-08 57.5 10.3 64 91-160 166-229 (238)
127 3gbg_A TCP pilus virulence reg 97.1 0.0023 8E-08 53.9 9.7 65 91-159 6-72 (276)
128 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 97.0 0.0032 1.1E-07 52.0 9.0 69 100-170 68-142 (197)
129 3ryk_A DTDP-4-dehydrorhamnose 97.0 0.0057 1.9E-07 50.7 10.3 67 100-167 78-155 (205)
130 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 96.9 0.011 3.6E-07 48.3 11.5 69 100-169 56-134 (185)
131 2vec_A YHAK, pirin-like protei 96.9 0.0039 1.3E-07 53.4 8.6 70 94-167 66-138 (256)
132 2ixk_A DTDP-4-dehydrorhamnose 96.8 0.013 4.5E-07 47.7 11.3 69 100-169 57-135 (184)
133 1vrb_A Putative asparaginyl hy 96.8 0.007 2.4E-07 53.7 10.4 71 97-168 145-250 (342)
134 1wlt_A 176AA long hypothetical 96.8 0.013 4.4E-07 48.3 11.2 67 100-167 73-150 (196)
135 1dzr_A DTDP-4-dehydrorhamnose 96.8 0.018 6.1E-07 46.8 11.8 67 100-167 55-132 (183)
136 1oi6_A PCZA361.16; epimerase, 96.8 0.018 6.3E-07 47.6 11.9 68 100-168 55-133 (205)
137 2c0z_A NOVW; isomerase, epimer 96.7 0.02 7E-07 47.7 11.7 67 100-167 63-140 (216)
138 4hn1_A Putative 3-epimerase in 96.6 0.015 5.2E-07 48.0 10.3 67 100-167 52-129 (201)
139 3o14_A Anti-ecfsigma factor, C 96.6 0.0027 9.1E-08 53.3 5.6 65 93-169 147-211 (223)
140 1upi_A DTDP-4-dehydrorhamnose 96.6 0.031 1E-06 47.0 11.9 67 100-167 74-151 (225)
141 1tq5_A Protein YHHW; bicupin, 96.5 0.013 4.4E-07 49.7 9.6 71 93-167 42-115 (242)
142 4gjz_A Lysine-specific demethy 96.5 0.012 4E-07 48.1 9.0 66 95-161 126-226 (235)
143 3bb6_A Uncharacterized protein 96.5 0.011 3.8E-07 45.3 7.8 70 100-170 22-99 (127)
144 3kmh_A D-lyxose isomerase; cup 96.4 0.0098 3.3E-07 50.3 7.5 71 91-161 105-197 (246)
145 3d8c_A Hypoxia-inducible facto 96.3 0.014 4.8E-07 51.8 9.0 74 96-170 186-296 (349)
146 2xdv_A MYC-induced nuclear ant 95.9 0.031 1.1E-06 51.4 9.1 65 95-160 141-223 (442)
147 3k2o_A Bifunctional arginine d 95.4 0.056 1.9E-06 47.9 8.8 67 96-162 175-282 (336)
148 2yu1_A JMJC domain-containing 95.4 0.05 1.7E-06 50.1 8.6 79 96-174 199-304 (451)
149 1e5r_A Proline oxidase; oxidor 95.3 0.03 1E-06 48.7 6.4 71 92-164 91-168 (290)
150 3al5_A HTYW5, JMJC domain-cont 95.3 0.049 1.7E-06 48.0 7.8 74 92-168 166-270 (338)
151 3kv5_D JMJC domain-containing 95.2 0.041 1.4E-06 51.2 7.3 65 97-161 270-361 (488)
152 2qdr_A Uncharacterized protein 95.2 0.18 6.1E-06 43.3 10.5 72 88-169 87-159 (303)
153 4diq_A Lysine-specific demethy 94.9 0.14 4.7E-06 47.7 10.0 69 95-164 166-256 (489)
154 2p17_A Pirin-like protein; GK1 94.9 0.19 6.5E-06 43.2 10.3 65 98-166 45-111 (277)
155 2qjv_A Uncharacterized IOLB-li 94.9 0.22 7.4E-06 42.9 10.5 92 75-171 139-246 (270)
156 3kv4_A PHD finger protein 8; e 94.9 0.091 3.1E-06 48.4 8.6 78 97-174 235-339 (447)
157 1eyb_A Homogentisate 1,2-dioxy 94.8 0.21 7.2E-06 46.0 10.8 56 105-167 170-225 (471)
158 3k3o_A PHF8, PHD finger protei 94.7 0.068 2.3E-06 48.0 7.3 66 97-162 151-243 (371)
159 3kv9_A JMJC domain-containing 94.5 0.084 2.9E-06 47.9 7.3 66 96-161 178-270 (397)
160 1j1l_A Pirin; beta sandwich, c 94.3 0.32 1.1E-05 42.1 10.4 88 73-166 21-113 (290)
161 3rcq_A Aspartyl/asparaginyl be 94.2 0.26 8.9E-06 40.4 9.0 89 81-176 90-185 (197)
162 2qnk_A 3-hydroxyanthranilate 3 93.9 0.23 7.8E-06 42.9 8.3 56 99-161 214-269 (286)
163 3pua_A GRC5, PHD finger protei 93.8 0.14 4.8E-06 46.3 7.3 66 97-162 178-270 (392)
164 3m3i_A Putative uncharacterize 93.7 2 6.7E-05 35.8 13.5 148 51-212 17-211 (225)
165 3loi_A Putative uncharacterize 93.3 2.5 8.7E-05 33.8 14.5 128 70-211 24-168 (172)
166 2oyz_A UPF0345 protein VPA0057 92.8 0.68 2.3E-05 33.5 8.2 61 93-159 24-84 (94)
167 3pur_A Lysine-specific demethy 92.4 0.22 7.5E-06 46.6 6.5 65 97-161 300-391 (528)
168 2rg4_A Uncharacterized protein 92.4 0.29 1E-05 40.3 6.7 73 95-167 106-201 (216)
169 1xe7_A YML079WP, hypothetical 91.3 5.3 0.00018 32.7 13.2 148 52-213 27-200 (203)
170 1xru_A 4-deoxy-L-threo-5-hexos 90.5 1.3 4.4E-05 38.3 8.9 75 87-164 175-256 (282)
171 3hqx_A UPF0345 protein aciad03 90.5 1.1 3.8E-05 33.3 7.4 67 97-169 42-108 (111)
172 3dv8_A Transcriptional regulat 89.0 1.7 5.7E-05 34.2 8.1 125 95-222 27-201 (220)
173 2wfp_A Mannose-6-phosphate iso 88.6 1.1 3.9E-05 40.2 7.5 58 91-156 323-380 (394)
174 1ft9_A Carbon monoxide oxidati 88.4 2 7E-05 33.9 8.3 122 95-222 24-195 (222)
175 1qwr_A Mannose-6-phosphate iso 87.8 2.4 8.1E-05 36.9 8.8 58 91-156 250-307 (319)
176 3eo6_A Protein of unknown func 87.4 1.1 3.6E-05 33.2 5.3 56 97-158 41-96 (106)
177 1pmi_A PMI, phosphomannose iso 87.2 2.7 9.1E-05 38.4 9.1 77 91-170 356-437 (440)
178 3dl3_A Tellurite resistance pr 86.6 2.5 8.7E-05 31.8 7.2 62 103-166 27-92 (119)
179 1j1l_A Pirin; beta sandwich, c 86.6 6.2 0.00021 33.9 10.7 78 89-171 166-243 (290)
180 1ywk_A 4-deoxy-L-threo-5-hexos 86.5 3.4 0.00012 35.7 8.9 68 87-155 175-249 (289)
181 1tq5_A Protein YHHW; bicupin, 86.1 1.9 6.6E-05 36.1 7.0 68 90-168 158-225 (242)
182 2fmy_A COOA, carbon monoxide o 85.8 3.8 0.00013 32.2 8.5 120 95-222 28-199 (220)
183 2vec_A YHAK, pirin-like protei 85.5 5 0.00017 33.9 9.4 71 90-167 180-250 (256)
184 2p17_A Pirin-like protein; GK1 85.2 5 0.00017 34.2 9.4 56 89-151 164-220 (277)
185 1zx5_A Mannosephosphate isomer 83.5 5.8 0.0002 34.2 9.1 57 91-157 229-286 (300)
186 1znp_A Hypothetical protein AT 81.5 17 0.00059 28.4 13.7 88 70-160 19-115 (154)
187 2pqq_A Putative transcriptiona 78.5 4.4 0.00015 29.3 5.8 52 95-147 29-81 (149)
188 2ypd_A Probable JMJC domain-co 75.2 3.1 0.00011 37.4 4.7 39 136-174 293-331 (392)
189 4ev0_A Transcription regulator 74.1 7.9 0.00027 30.0 6.5 125 95-222 23-195 (216)
190 2oz6_A Virulence factor regula 73.1 9.2 0.00031 29.4 6.6 123 96-222 15-196 (207)
191 2qjv_A Uncharacterized IOLB-li 72.7 23 0.0008 30.1 9.4 69 92-167 29-106 (270)
192 3iwz_A CAP-like, catabolite ac 72.1 9.6 0.00033 29.8 6.6 125 95-222 35-219 (230)
193 3fx3_A Cyclic nucleotide-bindi 72.0 8.4 0.00029 30.5 6.3 122 95-221 35-209 (237)
194 3e97_A Transcriptional regulat 71.9 8.9 0.0003 30.2 6.4 123 94-222 29-207 (231)
195 3d0s_A Transcriptional regulat 71.3 11 0.00039 29.5 6.9 122 96-222 31-209 (227)
196 1zx5_A Mannosephosphate isomer 71.0 3.1 0.00011 35.9 3.6 44 114-157 118-179 (300)
197 3ryp_A Catabolite gene activat 70.7 11 0.00039 28.9 6.7 124 96-222 21-199 (210)
198 3gyd_A CNMP-BD protein, cyclic 70.7 9.9 0.00034 29.3 6.3 52 94-146 62-114 (187)
199 3mdp_A Cyclic nucleotide-bindi 69.9 6.9 0.00023 28.0 4.9 53 94-147 29-85 (142)
200 2zcw_A TTHA1359, transcription 69.2 13 0.00045 28.6 6.8 123 96-222 7-178 (202)
201 3e6c_C CPRK, cyclic nucleotide 68.7 15 0.0005 29.4 7.1 126 95-223 33-210 (250)
202 3la7_A Global nitrogen regulat 68.6 12 0.00041 29.9 6.6 126 94-222 43-225 (243)
203 1qwr_A Mannose-6-phosphate iso 68.6 3.7 0.00013 35.7 3.6 44 113-156 117-178 (319)
204 2z69_A DNR protein; beta barre 68.5 3.9 0.00013 29.8 3.3 52 94-146 35-87 (154)
205 1pcq_O Groes protein; chaperon 67.8 12 0.00041 26.9 5.6 50 101-153 22-72 (97)
206 1o5l_A Transcriptional regulat 67.3 9.9 0.00034 29.7 5.7 124 95-222 23-196 (213)
207 3b02_A Transcriptional regulat 66.9 12 0.00041 28.7 6.0 107 113-222 17-171 (195)
208 2ptm_A Hyperpolarization-activ 66.3 10 0.00035 29.2 5.5 49 94-146 94-142 (198)
209 2bgc_A PRFA; bacterial infecti 65.9 13 0.00045 29.6 6.2 123 96-222 20-202 (238)
210 1zyb_A Transcription regulator 65.9 8.5 0.00029 30.6 5.1 126 94-222 43-218 (232)
211 3kcc_A Catabolite gene activat 65.8 14 0.00048 30.0 6.5 127 94-223 69-250 (260)
212 3dn7_A Cyclic nucleotide bindi 65.6 18 0.00061 27.4 6.8 52 95-147 31-83 (194)
213 2gau_A Transcriptional regulat 65.2 8.3 0.00028 30.4 4.9 126 94-222 33-212 (232)
214 3idb_B CAMP-dependent protein 62.1 24 0.00082 25.9 6.8 51 94-146 61-112 (161)
215 4ava_A Lysine acetyltransferas 61.6 14 0.00049 30.9 6.0 51 95-146 37-87 (333)
216 2qcs_B CAMP-dependent protein 60.9 20 0.0007 29.1 6.7 52 94-146 180-233 (291)
217 2k02_A Ferrous iron transport 60.8 4.3 0.00015 28.7 2.0 34 190-223 16-49 (87)
218 2wfp_A Mannose-6-phosphate iso 60.6 7.1 0.00024 35.0 3.9 23 135-157 239-261 (394)
219 1xsq_A Ureidoglycolate hydrola 59.9 30 0.001 27.2 7.1 77 91-167 53-137 (168)
220 2xxz_A Lysine-specific demethy 59.6 14 0.0005 32.4 5.7 32 136-167 279-310 (332)
221 3bpz_A Potassium/sodium hyperp 56.6 14 0.00047 28.7 4.6 48 94-146 95-142 (202)
222 2bdr_A Ureidoglycolate hydrola 55.5 37 0.0013 26.8 7.0 77 91-167 55-139 (175)
223 3ocp_A PRKG1 protein; serine/t 54.5 28 0.00094 24.8 5.8 47 95-146 47-93 (139)
224 1xn7_A Hypothetical protein YH 52.7 6 0.00021 27.2 1.7 33 190-222 16-48 (78)
225 2d93_A RAP guanine nucleotide 51.7 18 0.00061 25.7 4.3 47 95-146 40-87 (134)
226 2dkz_A Hypothetical protein LO 51.3 9.4 0.00032 26.9 2.4 33 180-215 45-77 (84)
227 3pna_A CAMP-dependent protein 50.7 39 0.0013 24.5 6.2 48 94-146 61-108 (154)
228 3avr_A Lysine-specific demethy 50.6 23 0.00077 33.1 5.7 33 136-168 338-370 (531)
229 2heo_A Z-DNA binding protein 1 48.9 4.6 0.00016 26.6 0.5 34 190-223 25-58 (67)
230 1pmi_A PMI, phosphomannose iso 45.0 18 0.0006 32.9 3.9 22 136-157 266-287 (440)
231 1ywk_A 4-deoxy-L-threo-5-hexos 44.2 81 0.0028 27.1 7.7 65 97-166 62-129 (289)
232 1tc3_C Protein (TC3 transposas 43.2 30 0.001 19.6 3.7 29 190-218 21-49 (51)
233 3tnp_B CAMP-dependent protein 42.9 51 0.0018 29.0 6.7 52 94-147 168-220 (416)
234 4ask_A Lysine-specific demethy 42.6 37 0.0013 31.5 5.7 32 136-167 313-344 (510)
235 1vp6_A CNBD, cyclic-nucleotide 41.7 19 0.00063 25.5 3.0 45 95-146 35-79 (138)
236 4f8a_A Potassium voltage-gated 40.6 42 0.0015 24.2 5.0 49 95-148 51-99 (160)
237 1o7f_A CAMP-dependent RAP1 gua 38.8 55 0.0019 28.7 6.2 54 94-148 65-121 (469)
238 3shr_A CGMP-dependent protein 38.6 35 0.0012 27.8 4.6 51 95-146 181-233 (299)
239 3dkw_A DNR protein; CRP-FNR, H 38.0 8 0.00027 30.2 0.4 124 95-222 33-210 (227)
240 1we3_O CPN10(groes); chaperoni 36.1 52 0.0018 23.7 4.5 54 101-157 27-81 (100)
241 3ukn_A Novel protein similar t 35.0 57 0.002 25.1 5.1 51 93-148 97-147 (212)
242 2xvc_A ESCRT-III, SSO0910; cel 35.0 14 0.00049 24.1 1.2 31 191-221 26-56 (59)
243 3g7d_A PHPD; non heme Fe(II) d 34.6 1.7E+02 0.0058 26.0 8.3 74 137-212 156-265 (443)
244 2qcs_B CAMP-dependent protein 34.1 78 0.0027 25.5 6.0 49 94-147 62-110 (291)
245 2vn2_A DNAD, chromosome replic 31.8 26 0.00087 25.8 2.4 35 188-222 49-83 (128)
246 2oz6_A Virulence factor regula 30.8 21 0.0007 27.3 1.8 10 191-200 176-185 (207)
247 2dk5_A DNA-directed RNA polyme 30.4 20 0.00068 25.2 1.4 43 180-222 25-68 (91)
248 2v79_A DNA replication protein 30.3 20 0.0007 26.9 1.6 35 188-222 49-83 (135)
249 1eyb_A Homogentisate 1,2-dioxy 29.2 46 0.0016 30.6 3.9 63 82-155 331-398 (471)
250 2gau_A Transcriptional regulat 29.1 26 0.00089 27.3 2.1 10 191-200 192-201 (232)
251 2jt1_A PEFI protein; solution 29.0 20 0.0007 24.4 1.3 32 191-222 25-56 (77)
252 2bgc_A PRFA; bacterial infecti 28.9 21 0.00071 28.3 1.5 10 191-200 181-191 (238)
253 1wgp_A Probable cyclic nucleot 28.8 9.6 0.00033 27.2 -0.5 34 112-146 46-82 (137)
254 3of1_A CAMP-dependent protein 28.6 48 0.0016 25.8 3.7 49 94-146 148-196 (246)
255 1yll_A PA5104, conserved hypot 28.4 1.3E+02 0.0043 24.2 6.2 34 114-151 141-174 (200)
256 3nx6_A 10KDA chaperonin; bacte 28.1 70 0.0024 22.7 4.0 27 131-157 50-76 (95)
257 3e97_A Transcriptional regulat 28.0 31 0.0011 26.8 2.5 9 191-199 187-195 (231)
258 2qdr_A Uncharacterized protein 27.8 58 0.002 27.9 4.1 65 91-173 216-288 (303)
259 3shr_A CGMP-dependent protein 27.8 1.1E+02 0.0038 24.7 6.0 49 94-147 62-110 (299)
260 1xru_A 4-deoxy-L-threo-5-hexos 27.8 1.4E+02 0.0048 25.5 6.6 42 112-158 77-119 (282)
261 3g7d_A PHPD; non heme Fe(II) d 27.3 3.3E+02 0.011 24.1 11.6 77 76-157 320-397 (443)
262 3iwz_A CAP-like, catabolite ac 27.2 26 0.0009 27.2 1.8 10 191-200 199-208 (230)
263 3e6c_C CPRK, cyclic nucleotide 27.1 33 0.0011 27.2 2.5 10 191-200 189-198 (250)
264 4din_B CAMP-dependent protein 26.9 55 0.0019 28.3 4.0 49 97-146 274-324 (381)
265 3ryp_A Catabolite gene activat 26.9 27 0.00092 26.7 1.8 10 191-200 179-188 (210)
266 2cfx_A HTH-type transcriptiona 26.6 36 0.0012 25.1 2.5 34 189-222 18-51 (144)
267 2pn6_A ST1022, 150AA long hypo 26.5 34 0.0012 25.3 2.3 37 186-222 13-49 (150)
268 4ev0_A Transcription regulator 26.1 28 0.00095 26.7 1.8 8 191-198 175-182 (216)
269 2zcw_A TTHA1359, transcription 26.0 29 0.00098 26.6 1.8 10 191-200 158-167 (202)
270 3d0s_A Transcriptional regulat 25.9 30 0.001 26.9 1.9 10 191-200 189-198 (227)
271 2lnb_A Z-DNA-binding protein 1 25.3 19 0.00064 25.0 0.5 35 190-224 34-68 (80)
272 3dkw_A DNR protein; CRP-FNR, H 25.2 27 0.00091 27.1 1.5 10 191-200 190-199 (227)
273 3la7_A Global nitrogen regulat 25.2 31 0.0011 27.4 2.0 10 191-200 205-214 (243)
274 1p3h_A 10 kDa chaperonin; beta 25.1 1.3E+02 0.0045 21.4 5.1 54 101-157 24-79 (99)
275 1s4c_A Protein HI0227; double- 25.0 98 0.0034 23.4 4.7 53 105-157 60-133 (155)
276 3b02_A Transcriptional regulat 24.9 25 0.00086 26.8 1.3 10 191-200 151-160 (195)
277 1qbj_A Protein (double-strande 24.2 31 0.0011 23.6 1.5 33 190-222 27-59 (81)
278 2htj_A P fimbrial regulatory p 23.5 34 0.0012 22.7 1.6 32 190-221 14-45 (81)
279 1zyb_A Transcription regulator 23.5 31 0.0011 27.1 1.6 10 191-200 198-207 (232)
280 3kcc_A Catabolite gene activat 23.4 40 0.0014 27.1 2.3 10 42-51 13-22 (260)
281 3dkq_A PKHD-type hydroxylase S 23.1 1.3E+02 0.0046 24.7 5.5 63 93-158 100-180 (243)
282 2p5v_A Transcriptional regulat 22.5 47 0.0016 25.0 2.4 34 189-222 23-56 (162)
283 2dbb_A Putative HTH-type trans 22.4 39 0.0013 25.0 1.9 35 188-222 21-55 (151)
284 2y75_A HTH-type transcriptiona 21.8 51 0.0018 23.7 2.4 33 190-222 26-58 (129)
285 1qgp_A Protein (double strande 21.0 27 0.00093 23.5 0.6 33 190-222 31-63 (77)
286 2ia0_A Putative HTH-type trans 20.9 52 0.0018 25.3 2.4 35 188-222 29-63 (171)
287 2w25_A Probable transcriptiona 20.7 54 0.0019 24.2 2.4 33 190-222 21-53 (150)
288 3tnp_B CAMP-dependent protein 20.5 74 0.0025 27.9 3.6 52 94-146 290-348 (416)
289 2d1h_A ST1889, 109AA long hypo 20.3 40 0.0014 22.8 1.4 34 189-222 35-68 (109)
No 1
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=100.00 E-value=9e-50 Score=333.93 Aligned_cols=194 Identities=53% Similarity=0.907 Sum_probs=184.1
Q ss_pred cCCCCCcceeecCCCCC-ccccCCCCCCCCCccCCCeee-e-ccCCCcccCCCCceEEEeecccCCCCccccEEEEEEEE
Q 040384 23 ADPDPLQDICIADLDAK-ISVNGFPCKPETEVTSDDFFF-D-LSEEGNLSNAFGRAVTEGNVHEFPGVNTQGISTNRVDL 99 (224)
Q Consensus 23 ~d~~~~~d~cva~~~~~-~~~~g~~ck~~~~vt~~df~f-~-l~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~rv~l 99 (224)
+||||||||||||++++ +++||+||| |+.++++||+| + +++++++.+..|+.++.++..++|+++++|+++.++++
T Consensus 1 ~~~~~~~d~c~~~~~~~~~~~~g~~c~-~~~~~~~df~~~~~~~~~~~~~~~~G~~v~~~~~~~~p~l~~~~~~~~~~~l 79 (201)
T 1fi2_A 1 TDPDPLQDFCVADLDGKAVSVNGHTCK-PMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDF 79 (201)
T ss_dssp CCCCCSSSCCCBCCCTTSCCCSSCCBC-CGGGCCSCTTCCCTTSSCCCCCSTTSEEEEEESTTTCGGGTTSSCEEEEEEE
T ss_pred CCCcccceeEEecCCCCcccccCcccc-cCcccccceEEeeeecCCCCccCCCCcEEEEEecccCCCcccCceEEEEEEE
Confidence 69999999999999988 999999999 99999999999 6 88888888899999999999999999999999999999
Q ss_pred eCCcccCceecCCCCceEEEEeCeEEEEEEeCC---CeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEEeeCCCCc
Q 040384 100 AVGGINPPHLHPRSSESSIVIRGTVLVGIITTD---NVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSFNSQLPG 176 (224)
Q Consensus 100 ~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~---~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~~s~~pg 176 (224)
.||++.+||||+++.|++||++|++++++++.+ ++++.+.|++||++++|+|..|++.|.|++++.++.++++++|+
T Consensus 80 ~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~~~p~ 159 (201)
T 1fi2_A 80 APGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPG 159 (201)
T ss_dssp CTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESSSCCC
T ss_pred CCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCCC
Confidence 999999999999989999999999999998765 67778999999999999999999999999999999999999999
Q ss_pred ceehhhhhhcCCCCCCHHHHHhhcCCCHHHHHHHHhccCCC
Q 040384 177 TQFVHSSLFNTTPPIPNEVLTKTFLVGDEVINAIKAAITSA 217 (224)
Q Consensus 177 ~~~~~~~lf~~~p~~p~evla~af~v~~~~v~~l~~~~~~~ 217 (224)
.+.++.++|+++|++++|+|+++|+++++++++|++.+.++
T Consensus 160 ~~~~~~~~~~~~~~~~~~vl~~af~~~~~~v~~l~~~~~~~ 200 (201)
T 1fi2_A 160 IVFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKSKFAGG 200 (201)
T ss_dssp CEEHHHHHHHCSSCCCHHHHHHHHTSCHHHHHHHHHHSTTC
T ss_pred eEehhhHHhcCCCCCCHHHHHHHHCcCHHHHHHHHHhhcCC
Confidence 99999999999888999999999999999999999988543
No 2
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=100.00 E-value=2e-34 Score=267.35 Aligned_cols=152 Identities=14% Similarity=0.216 Sum_probs=141.8
Q ss_pred CCcccCCCCceEEEeecccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCC-eEEEEEECCC
Q 040384 65 EGNLSNAFGRAVTEGNVHEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDN-VFYSKVVTAG 143 (224)
Q Consensus 65 ~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~-~~~~~~l~~G 143 (224)
.++..++.||+++.+++.+||+|+++|||+++++|.||||++|||||+|+||+||++|+++++++++++ +++..+|++|
T Consensus 296 ~~d~~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~G 375 (466)
T 3kgl_A 296 NADVYKPQLGYISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQG 375 (466)
T ss_dssp GEEEEETTTEEEEEECTTTCTTHHHHTCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETT
T ss_pred cCCcccCCCceEEEechhhCcccccCceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcEEEEeEecCC
Confidence 445568889999999999999999999999999999999999999999999999999999999999874 6789999999
Q ss_pred CEEEecCCCeeEEEecCCccEEEEEEeeCCCCcceehh--hhhhcCCCCCCHHHHHhhcCCCHHHHHHHHhccCCCcce
Q 040384 144 MLFLIPRGLVHFQLNVGKENVLFFPSFNSQLPGTQFVH--SSLFNTTPPIPNEVLTKTFLVGDEVINAIKAAITSAQLG 220 (224)
Q Consensus 144 Dv~vvP~G~~H~~~N~G~~~a~~~~~~~s~~pg~~~~~--~~lf~~~p~~p~evla~af~v~~~~v~~l~~~~~~~~~i 220 (224)
||++||+|++|++ |.|++++.+++++++++|+.+.++ .++|++ +|++||+++|+++.+++++|++.+.+..|+
T Consensus 376 DV~v~P~G~~H~~-~ag~e~~~~l~~f~s~np~~~~LaG~~s~~~~---lP~eVla~aF~v~~~~v~~Lk~~q~e~~i~ 450 (466)
T 3kgl_A 376 QLLSIPQGFSVVK-RATSEQFRWIEFKTNANAQINTLAGRTSVLRG---LPLEVISNGYQISLEEARRVKFNTIETTLT 450 (466)
T ss_dssp CEEEECTTCEEEE-EECSSEEEEEEEESSSSCCEEESSSTTCTGGG---SCHHHHHHHHTCCHHHHHHHHHSCCCSSEE
T ss_pred cEEEECCCCeEEE-EcCCCCEEEEEEECCCCCccccccchhhhhhh---CCHHHHHHHhCcCHHHHHHHHhccCccEEE
Confidence 9999999999998 789999999999999999999987 578887 999999999999999999999999887554
No 3
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=100.00 E-value=1.7e-33 Score=262.82 Aligned_cols=160 Identities=13% Similarity=0.206 Sum_probs=143.5
Q ss_pred eeecc--CCCcccCCCCceEEEeecccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCC-CeE
Q 040384 59 FFDLS--EEGNLSNAFGRAVTEGNVHEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTD-NVF 135 (224)
Q Consensus 59 ~f~l~--~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~-~~~ 135 (224)
.+++. ..++..++.||+++.+++.+||+|+++|||+++++|.||||++|||||+|+||+||++|+++++|++++ +++
T Consensus 323 ~~Ni~~p~~~di~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~ 402 (496)
T 3ksc_A 323 RLNIGPSSSPDIYNPEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGNTV 402 (496)
T ss_dssp EEECSTTSCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEE
T ss_pred hccccccccCCcccCCCeeEEEeCHHHCccccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCCcEE
Confidence 45444 335566888999999999999999999999999999999999999999999999999999999999986 467
Q ss_pred EEEEECCCCEEEecCCCeeEEEecCCccEEEEEEeeCCCCcceehh--hhhhcCCCCCCHHHHHhhcCCCHHHHHHHHhc
Q 040384 136 YSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSFNSQLPGTQFVH--SSLFNTTPPIPNEVLTKTFLVGDEVINAIKAA 213 (224)
Q Consensus 136 ~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~~s~~pg~~~~~--~~lf~~~p~~p~evla~af~v~~~~v~~l~~~ 213 (224)
+.++|++|||++||+|++|++.|. ++++.+++++++++|+.+.++ .++|++ +|++||+++|+++.+++++|++.
T Consensus 403 f~~~l~~GDV~v~P~G~~H~~~a~-~e~~~~l~f~~s~np~~~~LaG~~sv~~~---~p~eVLa~aF~v~~~~v~~Lk~~ 478 (496)
T 3ksc_A 403 FDGELEAGRALTVPQNYAVAAKSL-SDRFSYVAFKTNDRAGIARLAGTSSVINN---LPLDVVAATFNLQRNEARQLKSN 478 (496)
T ss_dssp EEEEEETTCEEEECTTCEEEEEEC-SSEEEEEEEESSTTCCEEESSSTTCTTTT---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred EEEEecCCeEEEECCCCEEEEEeC-CCCEEEEEEECCCCCccccccchhhhhhh---CCHHHHHHHHCcCHHHHHHHHhc
Confidence 889999999999999999998765 778999999999999999887 578886 99999999999999999999999
Q ss_pred cCCCcceecC
Q 040384 214 ITSAQLGHRP 223 (224)
Q Consensus 214 ~~~~~~i~r~ 223 (224)
+.+. .|+++
T Consensus 479 q~e~-~i~~~ 487 (496)
T 3ksc_A 479 NPFK-FLVPA 487 (496)
T ss_dssp CCCS-SEECC
T ss_pred CCcc-EEeCC
Confidence 8886 55554
No 4
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=100.00 E-value=1.1e-33 Score=262.40 Aligned_cols=153 Identities=14% Similarity=0.204 Sum_probs=142.1
Q ss_pred CCCcccCCCCceEEEeecccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCC-CeEEEEEECC
Q 040384 64 EEGNLSNAFGRAVTEGNVHEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTD-NVFYSKVVTA 142 (224)
Q Consensus 64 ~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~-~~~~~~~l~~ 142 (224)
..+++.++.||+++.+++.+||+|+++|+|+++++|.||||++|||||+|+||+||++|+++++|++++ ++++.++|++
T Consensus 295 ~~~dv~~~~gG~v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~ 374 (465)
T 3qac_A 295 SKADVYTPEAGRLTTVNSFNLPILRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELSR 374 (465)
T ss_dssp TTCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEET
T ss_pred ccCCcccCCCceEEEeCHHHCCCccccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEecC
Confidence 345667889999999999999999999999999999999999999999999999999999999999986 4788999999
Q ss_pred CCEEEecCCCeeEEEecCCccEEEEEEeeCCCCcceehh--hhhhcCCCCCCHHHHHhhcCCCHHHHHHHHhccCCCcce
Q 040384 143 GMLFLIPRGLVHFQLNVGKENVLFFPSFNSQLPGTQFVH--SSLFNTTPPIPNEVLTKTFLVGDEVINAIKAAITSAQLG 220 (224)
Q Consensus 143 GDv~vvP~G~~H~~~N~G~~~a~~~~~~~s~~pg~~~~~--~~lf~~~p~~p~evla~af~v~~~~v~~l~~~~~~~~~i 220 (224)
|||++||+|++|++. .|++++.+++++++++|+.+.++ .++|++ +|++||+++|+++.+++++|++++.+..|+
T Consensus 375 GDVfvvP~g~~h~~~-ag~e~~~~l~f~~s~np~~~~LaG~~sv~~~---ip~eVla~aF~v~~e~v~~Lk~~~~e~~i~ 450 (465)
T 3qac_A 375 GQLVVVPQNFAIVKQ-AFEDGFEWVSFKTSENAMFQSLAGRTSAIRS---LPIDVVSNIYQISREEAFGLKFNRPETTLF 450 (465)
T ss_dssp TCEEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSSSBHHHH---SCHHHHHHHHTCCHHHHHHHHHSCCSCSEE
T ss_pred CeEEEECCCcEEEEE-cCCCCeEEEEEecCCCCcccccccchhhhhh---CCHHHHHHHhCCCHHHHHHHHhccCccEEE
Confidence 999999999999985 67889999999999999999987 688886 999999999999999999999999888554
No 5
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=100.00 E-value=8.8e-33 Score=256.72 Aligned_cols=155 Identities=18% Similarity=0.270 Sum_probs=142.9
Q ss_pred CCCcccCCCCceEEEeecccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCC-CeEEEEEECC
Q 040384 64 EEGNLSNAFGRAVTEGNVHEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTD-NVFYSKVVTA 142 (224)
Q Consensus 64 ~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~-~~~~~~~l~~ 142 (224)
..+++.+..||+++.+++.+||+|+++|+|+++++|.|||+++|||||+|+||.||++|++++++++++ ++++..+|++
T Consensus 294 ~~~~~~~~~gG~v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~ 373 (459)
T 2e9q_A 294 ERADVFNPRGGRISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVRE 373 (459)
T ss_dssp SCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEET
T ss_pred ccCCcccCCCeeEEEeccccCccccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeC
Confidence 445556889999999999999999999999999999999999999999999999999999999999976 4677789999
Q ss_pred CCEEEecCCCeeEEEecCCccEEEEEEeeCCCCcceehh--hhhhcCCCCCCHHHHHhhcCCCHHHHHHHHhccCCCcce
Q 040384 143 GMLFLIPRGLVHFQLNVGKENVLFFPSFNSQLPGTQFVH--SSLFNTTPPIPNEVLTKTFLVGDEVINAIKAAITSAQLG 220 (224)
Q Consensus 143 GDv~vvP~G~~H~~~N~G~~~a~~~~~~~s~~pg~~~~~--~~lf~~~p~~p~evla~af~v~~~~v~~l~~~~~~~~~i 220 (224)
||+++||+|++|++.| |++++.+++++++++|+.+.++ .++|++ +|++||+++|+++.+++++|++.+.+.. |
T Consensus 374 GDv~v~P~G~~H~~~n-g~~~~~~l~~~~s~~~~~~~laG~~s~~~~---~p~~Vla~af~v~~~~v~~l~~~~~e~~-i 448 (459)
T 2e9q_A 374 GQVLMIPQNFVVIKRA-SDRGFEWIAFKTNDNAITNLLAGRVSQMRM---LPLGVLSNMYRISREEAQRLKYGQQEMR-V 448 (459)
T ss_dssp TCEEEECTTCEEEEEE-EEEEEEEEEEESSSSCCEEESSSSSSHHHH---SCHHHHHHHHTCCHHHHHHHHHSCCSCS-E
T ss_pred CcEEEECCCCEEEEEe-CCCCeEEEEEecCCCCcceeecchhHHHHh---CCHHHHHHHHCcCHHHHHHHHhcCCccE-E
Confidence 9999999999999999 7888999999999999999997 778887 9999999999999999999999987774 6
Q ss_pred ecC
Q 040384 221 HRP 223 (224)
Q Consensus 221 ~r~ 223 (224)
++|
T Consensus 449 ~~~ 451 (459)
T 2e9q_A 449 LSP 451 (459)
T ss_dssp ECS
T ss_pred eCC
Confidence 655
No 6
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=100.00 E-value=6.3e-33 Score=259.40 Aligned_cols=161 Identities=19% Similarity=0.290 Sum_probs=142.7
Q ss_pred eeecc--CCCcccCCCCceEEEeecccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCC-eE
Q 040384 59 FFDLS--EEGNLSNAFGRAVTEGNVHEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDN-VF 135 (224)
Q Consensus 59 ~f~l~--~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~-~~ 135 (224)
.|++. ..+++.++.||+++.+++.+||+|+++|||+++++|.|||+++|||||+|+||+||++|++++++++++| ++
T Consensus 359 ~~Ni~~ps~~d~~n~~GG~v~~a~~~~fP~L~~LgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~~v 438 (531)
T 3fz3_A 359 KENIGNPERADIFSPRAGRISTLNSHNLPILRFLRLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENGDAI 438 (531)
T ss_dssp EEECCCGGGCSEEETTTEEEEEESTTTCTHHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEE
T ss_pred eeccCCcccCCcccCCCeEEEEeccccCCccccCceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCCCcEE
Confidence 56544 3456778999999999999999999999999999999999999999999999999999999999999864 67
Q ss_pred EEEEECCCCEEEecCCCeeEEEecCCccEEEEEEeeCCCCcceehh--hhhhcCCCCCCHHHHHhhcCCCHHHHHHHHhc
Q 040384 136 YSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSFNSQLPGTQFVH--SSLFNTTPPIPNEVLTKTFLVGDEVINAIKAA 213 (224)
Q Consensus 136 ~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~~s~~pg~~~~~--~~lf~~~p~~p~evla~af~v~~~~v~~l~~~ 213 (224)
++.+|++||+++||+|++|+.. .|++.+.++++.++++|++..++ .++|++ +|++||+++|+++.+++++|++.
T Consensus 439 ~~~~L~~GDV~v~P~G~~H~~~-ag~e~l~flaF~ss~np~~~~LaG~~svf~~---lP~eVLa~aF~v~~e~v~kLk~~ 514 (531)
T 3fz3_A 439 LDQEVQQGQLFIVPQNHGVIQQ-AGNQGFEYFAFKTEENAFINTLAGRTSFLRA---LPDEVLANAYQISREQARQLKYN 514 (531)
T ss_dssp EEEEEETTCEEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSTTCHHHH---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred EEEEecCCeEEEECCCCeEEEe-cCCCCEEEEEEecCCCCcceeccchhHHHHh---CCHHHHHHHhCcCHHHHHHHHhc
Confidence 8999999999999999999875 56666666655556899999887 788897 99999999999999999999999
Q ss_pred cCCCcceecC
Q 040384 214 ITSAQLGHRP 223 (224)
Q Consensus 214 ~~~~~~i~r~ 223 (224)
+.+..|+.+|
T Consensus 515 ~~es~i~~pp 524 (531)
T 3fz3_A 515 RQETIALSSS 524 (531)
T ss_dssp CCCSSEECC-
T ss_pred CCCceEECCC
Confidence 9998777665
No 7
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.98 E-value=4.6e-32 Score=251.23 Aligned_cols=163 Identities=15% Similarity=0.195 Sum_probs=139.4
Q ss_pred cCCCeeeeccCCCcccCCCCceEEEeecccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCC
Q 040384 54 TSDDFFFDLSEEGNLSNAFGRAVTEGNVHEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDN 133 (224)
Q Consensus 54 t~~df~f~l~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~ 133 (224)
....++|.|....+..+..||+++.+++.+||+|+++|+++++++|.||||++|||||+|+||+||++|+++++++++++
T Consensus 243 ~~~~~~~~l~~~~p~~~~~~G~v~~~~~~~fP~L~~l~is~~~v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~ 322 (445)
T 2cav_A 243 SSQDKPFNLRSRDPIYSNNYGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQ 322 (445)
T ss_dssp ---CCCEETTSSCCSEESSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC--
T ss_pred CCcccceeccccCCCccCCCceEEEeChHHCcccccCCCceEEEEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEeCCC
Confidence 34567786544434346778899999999999999999999999999999999999999999999999999999999863
Q ss_pred ---------e--EEEEEECCCCEEEecCCCeeEEEecCCccEEEEEEe-eCCCCcceehh---hhhhcCCCCCCHHHHHh
Q 040384 134 ---------V--FYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSF-NSQLPGTQFVH---SSLFNTTPPIPNEVLTK 198 (224)
Q Consensus 134 ---------~--~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~-~s~~pg~~~~~---~~lf~~~p~~p~evla~ 198 (224)
+ +++.+|++|||++||+|++|++.|. +++.++++. ++++|+.+.++ .++|++ +|++||++
T Consensus 323 ~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~~---~p~~vla~ 397 (445)
T 2cav_A 323 QQQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAA--SDLNMVGIGVNAENNERNFLAGHKENVIRQ---IPRQVSDL 397 (445)
T ss_dssp ---------CCEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEESCTTCCEEESSSSTTBSGGG---SCHHHHHH
T ss_pred cccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcC--CCeEEEEEEccCCCCCcEEcccchhhhhhh---CCHHHHHH
Confidence 3 6899999999999999999999998 357777655 45689999887 689997 99999999
Q ss_pred hcCCCHHHHHHHHhccCCCccee
Q 040384 199 TFLVGDEVINAIKAAITSAQLGH 221 (224)
Q Consensus 199 af~v~~~~v~~l~~~~~~~~~i~ 221 (224)
+|+++.+++++|++.+.++.++-
T Consensus 398 af~v~~~~v~~l~~~~~e~~~~~ 420 (445)
T 2cav_A 398 TFPGSGEEVEELLENQKESYFVD 420 (445)
T ss_dssp HSSSCHHHHHHHHHHCCSCSEEE
T ss_pred HHCcCHHHHHHHHhcCCccEEeC
Confidence 99999999999999998886543
No 8
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.97 E-value=1.1e-31 Score=246.93 Aligned_cols=162 Identities=14% Similarity=0.178 Sum_probs=141.7
Q ss_pred cCCCeeeeccCCCcccCCCCceEEEeecccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCC
Q 040384 54 TSDDFFFDLSEEGNLSNAFGRAVTEGNVHEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDN 133 (224)
Q Consensus 54 t~~df~f~l~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~ 133 (224)
....+.|.|....+..+..+|+++.+++.+||+|+++|+++++++|.|||+++|||||+|+||.||++|+++++++++++
T Consensus 211 ~~~~~~~~l~~~~p~~~~~~G~~~~~~~~~~P~L~~l~is~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g 290 (416)
T 1uij_A 211 SSEDEPFNLRSRNPIYSNNFGKFFEITPEKNPQLRDLDIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGIKE 290 (416)
T ss_dssp GCSSSCEETTSSCCSEECSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEEC-
T ss_pred CCcccceeccccCCCccCCCceEEEEChHHCccchhcCcceEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEcCCC
Confidence 35667885544433335566689999999999999999999999999999999999999999999999999999999876
Q ss_pred --------------eEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEEeeC-CCCcceehh---hhhhcCCCCCCHHH
Q 040384 134 --------------VFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSFNS-QLPGTQFVH---SSLFNTTPPIPNEV 195 (224)
Q Consensus 134 --------------~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~~s-~~pg~~~~~---~~lf~~~p~~p~ev 195 (224)
+.+..+|++||+++||+|++||+.|. +++.+++++++ ++|+.+.++ .++|++ +|++|
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~l~f~~~~~~~~~~~laG~~~sv~~~---~p~~v 365 (416)
T 1uij_A 291 QQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT--SNLNFLAFGINAENNQRNFLAGEKDNVVRQ---IERQV 365 (416)
T ss_dssp -----------CCEEEEEEEEETTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBSGGG---SCHHH
T ss_pred ccccccccccccceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEEcCCCCCcceecccchhhHHHh---CCHHH
Confidence 47788999999999999999999998 57888888865 499999887 688997 99999
Q ss_pred HHhhcCCCHHHHHHHHhccCCCcce
Q 040384 196 LTKTFLVGDEVINAIKAAITSAQLG 220 (224)
Q Consensus 196 la~af~v~~~~v~~l~~~~~~~~~i 220 (224)
|+++|+++++++++|++.+.+..|+
T Consensus 366 la~af~~~~~~v~~l~~~~~~~~~~ 390 (416)
T 1uij_A 366 QELAFPGSAQDVERLLKKQRESYFV 390 (416)
T ss_dssp HHHHSSSCHHHHHHHTTSCCSCSEE
T ss_pred HHHHHCcCHHHHHHHHhcCCccEEE
Confidence 9999999999999999998877544
No 9
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.97 E-value=5.2e-31 Score=243.55 Aligned_cols=163 Identities=16% Similarity=0.228 Sum_probs=141.8
Q ss_pred ccCCCeeeeccCCCcccCCCCceEEEeecccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCC
Q 040384 53 VTSDDFFFDLSEEGNLSNAFGRAVTEGNVHEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTD 132 (224)
Q Consensus 53 vt~~df~f~l~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~ 132 (224)
.....+.|.|....+..+..||+++++++.+||+|+++|+++++++|.||||++|||||+|+||.||++|++++++++++
T Consensus 227 ~~~~~~~~~l~~~~p~~~~~gG~v~~~~~~~~P~L~~l~is~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~ 306 (434)
T 2ea7_A 227 LSSQDEPFNLRNSKPIYSNKFGRWYEMTPEKNPQLKDLDVFISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELVGLS 306 (434)
T ss_dssp TTCSSSCEETTSSCCSEEETTEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEEE
T ss_pred CCCcccceeeccCCCceeCCCcEEEEEChhhCccccccCcceEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEEecC
Confidence 34556778655444434567889999999999999999999999999999999999999999999999999999999885
Q ss_pred C-------------eEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEEee-CCCCcceehh---hhhhcCCCCCCHHH
Q 040384 133 N-------------VFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSFN-SQLPGTQFVH---SSLFNTTPPIPNEV 195 (224)
Q Consensus 133 ~-------------~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~~-s~~pg~~~~~---~~lf~~~p~~p~ev 195 (224)
+ +.+..+|++||+++||+|++||+.|. +++.+++++. +++++.+.++ .++|++ +|++|
T Consensus 307 g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~~---~p~~v 381 (434)
T 2ea7_A 307 DQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINAT--SNLNFFAFGINAENNRRNFLAGGKDNVMSE---IPTEV 381 (434)
T ss_dssp ECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBGGGG---SCHHH
T ss_pred ccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEECCCCCCCceecccchhhhhhh---CCHHH
Confidence 4 36778999999999999999999998 4688887764 4589999888 688997 99999
Q ss_pred HHhhcCCCHHHHHHHHhccCCCcce
Q 040384 196 LTKTFLVGDEVINAIKAAITSAQLG 220 (224)
Q Consensus 196 la~af~v~~~~v~~l~~~~~~~~~i 220 (224)
|+++|+++.+++++|++.+.+..|+
T Consensus 382 la~af~v~~~~v~~l~~~~~e~~~~ 406 (434)
T 2ea7_A 382 LEVSFPASGKKVEKLIKKQSESHFV 406 (434)
T ss_dssp HHHHSSSCHHHHHHHHTTCCSCSEE
T ss_pred HHHHHCcCHHHHHHHHhcCCccEEE
Confidence 9999999999999999998877544
No 10
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.97 E-value=2.9e-31 Score=243.98 Aligned_cols=159 Identities=13% Similarity=0.149 Sum_probs=137.9
Q ss_pred CCeeee-ccCCCcccCCCCceEEEeecccC-CCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCC
Q 040384 56 DDFFFD-LSEEGNLSNAFGRAVTEGNVHEF-PGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDN 133 (224)
Q Consensus 56 ~df~f~-l~~~~~~~~~~g~~~~~~~~~~~-P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~ 133 (224)
..++|+ +.+.+.++ ..+|+++.+++.+| |+|+++|+++++++|.||||++|||||+|+||+||++|+++++++++++
T Consensus 226 ~~~~~nl~~~~p~~~-n~~G~~~~~~~~~~~p~L~~~gis~~r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~ 304 (418)
T 3s7i_A 226 ITNPINLREGEPDLS-NNFGKLFEVKPDKKNPQLQDLDMMLTCVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRK 304 (418)
T ss_dssp CCCCEETTCSCCSEE-ETTEEEEEECSBTTBHHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEE
T ss_pred CCcccccccCCCcee-CCCCeEEEechHHcchhhccCCeeEEEEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCC
Confidence 367785 44445544 55667999999999 9999999999999999999999999999999999999999999998765
Q ss_pred -------------------------eEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEEe-eCCCCcceehhh---hh
Q 040384 134 -------------------------VFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSF-NSQLPGTQFVHS---SL 184 (224)
Q Consensus 134 -------------------------~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~-~s~~pg~~~~~~---~l 184 (224)
+.+..+|++|||++||+|++||+.|.+ ++.++++. ++++|+.+.++. ++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~~~--~l~~v~f~~~~~~~~~~~LAG~~~sv 382 (418)
T 3s7i_A 305 EQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINASS--ELHLLGFGINAENNHRIFLAGDKDNV 382 (418)
T ss_dssp C-------------------CCEEEEEEEEEECTTCEEEECTTCCEEEEESS--CEEEEEEEESCTTCCEEESSSSTTBH
T ss_pred ccccccccccccccccccccccccceEEEeeeCCCCEEEECCCCEEEEECCC--CEEEEEEEcCCCCCcceEccCchhhh
Confidence 567899999999999999999998864 46666654 456899999885 68
Q ss_pred hcCCCCCCHHHHHhhcCCCHHHHHHHHhccCCCcce
Q 040384 185 FNTTPPIPNEVLTKTFLVGDEVINAIKAAITSAQLG 220 (224)
Q Consensus 185 f~~~p~~p~evla~af~v~~~~v~~l~~~~~~~~~i 220 (224)
|++ +|++||++||+++.+++++|++++++..++
T Consensus 383 ~~~---~~~evla~af~v~~~~v~~L~~~q~e~~~~ 415 (418)
T 3s7i_A 383 IDQ---IEKQAKDLAFPGSGEQVEKLIKNQKESHFV 415 (418)
T ss_dssp HHH---SCHHHHHHHSSSCHHHHHHHHHTCCSCSEE
T ss_pred hhc---CCHHHHHHHhCCCHHHHHHHHhcCCcceee
Confidence 887 999999999999999999999999988543
No 11
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.97 E-value=2e-30 Score=243.07 Aligned_cols=155 Identities=14% Similarity=0.244 Sum_probs=142.1
Q ss_pred CCCcccCCCCceEEEeecccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCC-eEEEEEECC
Q 040384 64 EEGNLSNAFGRAVTEGNVHEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDN-VFYSKVVTA 142 (224)
Q Consensus 64 ~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~-~~~~~~l~~ 142 (224)
..+++.+..|++++.+++.+||+|+++++++++++|.||++.+|||||+++|++||++|++++++++++| +++..+|++
T Consensus 344 ~~~~~~~~~gG~v~~~~~~~fP~L~~l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~ 423 (510)
T 3c3v_A 344 RSPDIYNPQAGSLKTANELNLLILRWLGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQE 423 (510)
T ss_dssp SCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEET
T ss_pred ccCCcccCCCeEEEEeccccCcccccceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcC
Confidence 3456678899999999999999999999999999999999999999999999999999999999998864 677888999
Q ss_pred CCEEEecCCCeeEEEecCCccEEEEEEeeCCCCcceehh--hhhhcCCCCCCHHHHHhhcCCCHHHHHHHHhccCCCcce
Q 040384 143 GMLFLIPRGLVHFQLNVGKENVLFFPSFNSQLPGTQFVH--SSLFNTTPPIPNEVLTKTFLVGDEVINAIKAAITSAQLG 220 (224)
Q Consensus 143 GDv~vvP~G~~H~~~N~G~~~a~~~~~~~s~~pg~~~~~--~~lf~~~p~~p~evla~af~v~~~~v~~l~~~~~~~~~i 220 (224)
||+++||+|++|++.| |++++.+++++.+.+|+...++ .++|++ +|++||+++|+++.+++++|++.+.+. .|
T Consensus 424 GDv~viP~G~~H~~~N-g~e~l~~l~f~~s~~p~~~~LaG~~svf~~---lp~eVla~aF~v~~e~v~~L~~~~~e~-~i 498 (510)
T 3c3v_A 424 GHVLVVPQNFAVAGKS-QSDNFEYVAFKTDSRPSIANLAGENSVIDN---LPEEVVANSYGLPREQARQLKNNNPFK-FF 498 (510)
T ss_dssp TCEEEECTTCEEEEEE-CSSEEEEEEEESSSSCCEEESSSTTSTTTT---SCHHHHHHHHTCCHHHHHHHHHSCCCS-SE
T ss_pred CcEEEECCCCeEEEEe-CCCCEEEEEEECCCCcceeecccHhHHHHh---CCHHHHHHHHCcCHHHHHHHHhhCCCc-EE
Confidence 9999999999999999 8888888888878899999997 788997 999999999999999999999998775 56
Q ss_pred ecC
Q 040384 221 HRP 223 (224)
Q Consensus 221 ~r~ 223 (224)
++|
T Consensus 499 ~~p 501 (510)
T 3c3v_A 499 VPP 501 (510)
T ss_dssp ECC
T ss_pred ECC
Confidence 665
No 12
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.97 E-value=4.3e-30 Score=239.64 Aligned_cols=155 Identities=17% Similarity=0.281 Sum_probs=141.8
Q ss_pred CCCcccCCCCceEEEeecccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCC-eEEEEEECC
Q 040384 64 EEGNLSNAFGRAVTEGNVHEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDN-VFYSKVVTA 142 (224)
Q Consensus 64 ~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~-~~~~~~l~~ 142 (224)
..+++.+..||+++.+++.+||+|+++++++++++|.||++++|||||+++|++||++|++++++++++| +.+..+|++
T Consensus 310 ~~~~~~~~~gG~v~~~~~~~~P~L~~l~is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~ 389 (476)
T 1fxz_A 310 SSPDIYNPQAGSVTTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQE 389 (476)
T ss_dssp SCCSEEETTTEEEEEECTTTSGGGTTTTCCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEET
T ss_pred ccCCcccCCCeEEEEeccccCcccccCcceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcC
Confidence 3455668899999999999999999999999999999999999999999999999999999999998764 667788999
Q ss_pred CCEEEecCCCeeEEEecCCccEEEEEEeeCCCCcceehh--hhhhcCCCCCCHHHHHhhcCCCHHHHHHHHhccCCCcce
Q 040384 143 GMLFLIPRGLVHFQLNVGKENVLFFPSFNSQLPGTQFVH--SSLFNTTPPIPNEVLTKTFLVGDEVINAIKAAITSAQLG 220 (224)
Q Consensus 143 GDv~vvP~G~~H~~~N~G~~~a~~~~~~~s~~pg~~~~~--~~lf~~~p~~p~evla~af~v~~~~v~~l~~~~~~~~~i 220 (224)
||+++||+|++|++.| |++.+.+++++++++|+...++ .++|++ +|++||+++|+++++++++|++.+.+.. |
T Consensus 390 GDv~viP~G~~H~~~n-g~~~l~~l~f~~s~~p~~~~laG~~s~~~~---~p~~Vla~af~~~~~~v~~l~~~~~e~~-i 464 (476)
T 1fxz_A 390 GRVLIVPQNFVVAARS-QSDNFEYVSFKTNDTPMIGTLAGANSLLNA---LPEEVIQHTFNLKSQQARQIKNNNPFKF-L 464 (476)
T ss_dssp TCEEEECTTCEEEEEE-CSTTEEEEEEESSSSCCEEESSSTTCTGGG---SCHHHHHHHHTCCHHHHHHHHHSCCCSS-E
T ss_pred CCEEEECCCCeEEEEe-CCCCEEEEEEECCCCCceeEccchhHHHHh---CCHHHHHHHhCcCHHHHHHHHhhCCCcE-E
Confidence 9999999999999999 8888888888878899999987 788997 9999999999999999999999987764 5
Q ss_pred ecC
Q 040384 221 HRP 223 (224)
Q Consensus 221 ~r~ 223 (224)
++|
T Consensus 465 ~~p 467 (476)
T 1fxz_A 465 VPP 467 (476)
T ss_dssp ECC
T ss_pred eCC
Confidence 555
No 13
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.97 E-value=2.2e-30 Score=242.40 Aligned_cols=154 Identities=20% Similarity=0.361 Sum_probs=141.8
Q ss_pred CCCcccCCCCceEEEeecccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCC-CeEEEEEECC
Q 040384 64 EEGNLSNAFGRAVTEGNVHEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTD-NVFYSKVVTA 142 (224)
Q Consensus 64 ~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~-~~~~~~~l~~ 142 (224)
.++++.++.|++++.+++.+||+|+++++++++++|.||++.+||||++++|++||++|++++++++++ ++++..+|++
T Consensus 339 ~~~~~~~~~gG~v~~~~~~~~P~L~~lgls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~ 418 (493)
T 2d5f_A 339 SRADFYNPKAGRISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRR 418 (493)
T ss_dssp GGCSEEETTTEEEEEESTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEET
T ss_pred CCCCcccCCCeEEEEeccccCccccccceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcC
Confidence 456777899999999999999999999999999999999999999999999999999999999999876 4667788999
Q ss_pred CCEEEecCCCeeEEEecCCccEEEEEEeeCCCCcceehhhhhhcCCCCCCHHHHHhhcCCCHHHHHHHHhccCCCcceec
Q 040384 143 GMLFLIPRGLVHFQLNVGKENVLFFPSFNSQLPGTQFVHSSLFNTTPPIPNEVLTKTFLVGDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 143 GDv~vvP~G~~H~~~N~G~~~a~~~~~~~s~~pg~~~~~~~lf~~~p~~p~evla~af~v~~~~v~~l~~~~~~~~~i~r 222 (224)
||+++||+|++|++.| +++++.+++++++++|+.+.+ .++|++ +|++||+++|+++.+++++|++.+.+.. |++
T Consensus 419 GDv~vvP~G~~H~~~n-~~e~~~~l~~~ts~~p~~~~l-~s~~~~---~p~eVla~aF~v~~~~v~~l~~~~~e~~-i~~ 492 (493)
T 2d5f_A 419 GQLLVVPQNFVVAEQG-GEQGLEYVVFKTHHNAVSSYI-KDVFRA---IPSEVLSNSYNLGQSQVRQLKYQGNSGP-LVN 492 (493)
T ss_dssp TCEEEECTTCEEEEEE-EEEEEEEEEEESSTTCCEEEH-HHHHHH---SCHHHHHHHHTCCHHHHHHHHHSSCSSS-EEC
T ss_pred CCEEEECCCCeEeeee-CCCCEEEEEEECCCCCcceeH-HHHHHh---CCHHHHHHHHCcCHHHHHHHHhcCCCce-ecC
Confidence 9999999999999988 457899999999999999999 788897 9999999999999999999999998875 555
Q ss_pred C
Q 040384 223 P 223 (224)
Q Consensus 223 ~ 223 (224)
|
T Consensus 493 p 493 (493)
T 2d5f_A 493 P 493 (493)
T ss_dssp C
T ss_pred C
Confidence 4
No 14
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.97 E-value=8.5e-30 Score=209.29 Aligned_cols=159 Identities=13% Similarity=0.153 Sum_probs=132.8
Q ss_pred CeeeeccCCCcccCCCCceEEEeec-----ccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeC
Q 040384 57 DFFFDLSEEGNLSNAFGRAVTEGNV-----HEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITT 131 (224)
Q Consensus 57 df~f~l~~~~~~~~~~g~~~~~~~~-----~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~ 131 (224)
.|+|.+.+..+.....||+++.++. ..+|+++ ++++.+++++||++.+|| |++++|++||++|+++++++++
T Consensus 3 p~~f~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~pg~~~~pH-h~~a~E~~yVl~G~~~v~v~~~ 79 (178)
T 1dgw_A 3 PYLFRSNKFLTLFKNQHGSLRLLQRFNEDTEKLENLR--DYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVNP 79 (178)
T ss_dssp TTEECGGGEEEEEEETTEEEEEECCTTSSCGGGGGGT--TEEEEEEEECTTEEEEEE-EESSEEEEEEEESEEEEEEEET
T ss_pred CceechhhcccceEcCCCEEEEEcccCCcchhcCCcC--cEEEEEEEecCCcEecCc-CCCCCEEEEEEeEEEEEEEEeC
Confidence 4777655543434678999999877 6678777 699999999999999999 8899999999999999999987
Q ss_pred CCeEEEEEECCCCEEEecCCCeeEEEecCCc-cEEEEEEe-eCCCCcce---ehh-----hhhhcCCCCCCHHHHHhhcC
Q 040384 132 DNVFYSKVVTAGMLFLIPRGLVHFQLNVGKE-NVLFFPSF-NSQLPGTQ---FVH-----SSLFNTTPPIPNEVLTKTFL 201 (224)
Q Consensus 132 ~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~-~a~~~~~~-~s~~pg~~---~~~-----~~lf~~~p~~p~evla~af~ 201 (224)
++. ..+.|++||++++|+|..||++|.|++ +++++.++ .+++|+.+ .++ .++|++ +|+|||+++|+
T Consensus 80 ~~~-~~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v~~~~~~~g~~~~~~l~g~~~~~~~~~~---~p~~vla~af~ 155 (178)
T 1dgw_A 80 DGR-DTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLSA---FSKNFLEASYD 155 (178)
T ss_dssp TEE-EEEEEETTEEEEECTTCCEEEEECCSSSCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGGG---SCHHHHHHHHT
T ss_pred CCc-EEEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEEECCCCCCCceEEeeccCCcCcchhhhh---CCHHHHHHHHC
Confidence 653 478999999999999999999999986 67777664 45677743 332 578887 99999999999
Q ss_pred CCHHHHHHHHhccCCCcceec
Q 040384 202 VGDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 202 v~~~~v~~l~~~~~~~~~i~r 222 (224)
++++++++|+....+++.|+|
T Consensus 156 v~~~~~~~l~~~~~~~~~iv~ 176 (178)
T 1dgw_A 156 SPYDEIEQTLLQEEQEGVIVK 176 (178)
T ss_dssp SCHHHHHHHTTSCCSSSSEEE
T ss_pred cCHHHHHHHhcCcCcCceEEE
Confidence 999999999977667778876
No 15
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.95 E-value=3e-28 Score=222.62 Aligned_cols=150 Identities=15% Similarity=0.146 Sum_probs=126.7
Q ss_pred eeccCCCcccCCCCceEEEeecccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeC------C-
Q 040384 60 FDLSEEGNLSNAFGRAVTEGNVHEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITT------D- 132 (224)
Q Consensus 60 f~l~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~------~- 132 (224)
+++....+..+..+|+++++++.+ +++++++++|.|||+.+|||||+|+||.||++|+++++++++ +
T Consensus 213 ~~l~~~~p~~~n~~G~~~~v~~~~------l~is~a~v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g 286 (397)
T 2phl_A 213 KSLSKQDNTIGNEFGNLTERTDNS------LNVLISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLE 286 (397)
T ss_dssp -------CEEEETTEEEEEEEETT------TTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSC
T ss_pred ccccccCCcccCCCCeEEEEeecc------CCeeEEEEEEcCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCC
Confidence 344444343456677799999988 799999999999999999999999999999999999999997 4
Q ss_pred CeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEEee-CCCCcceehh---hhhhcCCCCCC-----HHHHHhhcCCC
Q 040384 133 NVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSFN-SQLPGTQFVH---SSLFNTTPPIP-----NEVLTKTFLVG 203 (224)
Q Consensus 133 ~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~~-s~~pg~~~~~---~~lf~~~p~~p-----~evla~af~v~ 203 (224)
+++++.+|++||+++||+|++||++|.+ ++.++++.. +++|+.+.++ .++|++ +| ++||+++|+++
T Consensus 287 ~~~~~~~l~~GDV~vvP~G~~h~~~n~~--~l~~l~f~~~s~~~~~~~laG~~~sv~~~---~p~~~~~~eVla~af~v~ 361 (397)
T 2phl_A 287 YESYRAELSKDDVFVIPAAYPVAIKATS--NVNFTGFGINANNNNRNLLAGKTDNVISS---IGRALDGKDVLGLTFSGS 361 (397)
T ss_dssp EEEEEEEEETTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSSSBHHHH---HHTSTTHHHHHHHHSSSC
T ss_pred ceEEEEEecCCCEEEECCCCeEEEEeCC--CeEEEEEECCCCCCcceecccchhhHHhh---CCCccchHHHHHHHhCcC
Confidence 4889999999999999999999999986 678777655 4589998887 788987 66 99999999999
Q ss_pred HHHHHHHHhccCCCcce
Q 040384 204 DEVINAIKAAITSAQLG 220 (224)
Q Consensus 204 ~~~v~~l~~~~~~~~~i 220 (224)
++++++|++.+.+..|+
T Consensus 362 ~~~v~~l~~~~~e~~i~ 378 (397)
T 2phl_A 362 GDEVMKLINKQSGSYFV 378 (397)
T ss_dssp HHHHHHHHTTCCCCSEE
T ss_pred HHHHHHHHhcCCccEEe
Confidence 99999999998777443
No 16
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.95 E-value=2.8e-28 Score=226.43 Aligned_cols=148 Identities=16% Similarity=0.269 Sum_probs=129.0
Q ss_pred CCCCceEEEeecccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCe-EE------------
Q 040384 70 NAFGRAVTEGNVHEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNV-FY------------ 136 (224)
Q Consensus 70 ~~~g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~-~~------------ 136 (224)
...+| .++++..+.|+|+++|++++|++|+|||+++|||| +++|++||++|++++++++++++ .+
T Consensus 42 ~se~G-~~~~~~~~~~~l~~~gvs~~r~~i~pggl~~Ph~h-~a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~ 119 (459)
T 2e9q_A 42 EAEAG-FTEVWDQDNDEFQCAGVNMIRHTIRPKGLLLPGFS-NAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGS 119 (459)
T ss_dssp EETTE-EEEECCTTSHHHHHHTEEEEEEEECTTEEEEEEEE-SSCEEEEEEECEEEEEECCTTCCCCEEECCC-------
T ss_pred ecCCc-EEEecCCCChhhccCceEEEEEEEcCCCEecceec-CCceEEEEEeeEEEEEEEeCCCcchhccchhhcccccc
Confidence 34566 45667788899999999999999999999999999 59999999999999999988652 11
Q ss_pred --------EEEECCCCEEEecCCCeeEEEecCCccEEEEEEeeCCC--------Ccceehh-------------------
Q 040384 137 --------SKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSFNSQL--------PGTQFVH------------------- 181 (224)
Q Consensus 137 --------~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~~s~~--------pg~~~~~------------------- 181 (224)
.++|++||+++||+|++||++|.|++++++++++++.| +..+.++
T Consensus 120 ~~~d~~q~~~~l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ 199 (459)
T 2e9q_A 120 AFKDQHQKIRPFREGDLLVVPAGVSHWMYNRGQSDLVLIVFADTRNVANQIDPYLRKFYLAGRPEQVERGVEEWERSSRK 199 (459)
T ss_dssp CCCEEECCCEEEETTEEEEECTTCCEEEEECSSSCEEEEEEEESSSTTCCSCSSCCEEESSSCCCCCSSTTCC-------
T ss_pred ccccccceeEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEecCCCcccccCcccceeeccCCccccchhhhcccccccc
Confidence 46999999999999999999999999999999998655 3344444
Q ss_pred -------hhhhcCCCCCCHHHHHhhcCCCHHHHHHHHhccCCCcceec
Q 040384 182 -------SSLFNTTPPIPNEVLTKTFLVGDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 182 -------~~lf~~~p~~p~evla~af~v~~~~v~~l~~~~~~~~~i~r 222 (224)
.++|++ |++++|++||+++.++++||++.+.+++.|+|
T Consensus 200 ~~~~~~~~nif~g---f~~evLa~aF~v~~~~v~kL~~~~~~~G~Iv~ 244 (459)
T 2e9q_A 200 GSSGEKSGNIFSG---FADEFLEEAFQIDGGLVRKLKGEDDERDRIVQ 244 (459)
T ss_dssp -----CCCCTTTT---SCHHHHHHHHTCCHHHHHHHHTTTCCSTTEEE
T ss_pred ccccccccchhhc---CCHHHHHhhcCCCHHHHHhhhhcccCCccEEE
Confidence 379997 99999999999999999999999998888886
No 17
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.95 E-value=8.5e-28 Score=224.45 Aligned_cols=148 Identities=12% Similarity=0.228 Sum_probs=128.6
Q ss_pred CCCceEEEeecccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCC-eEE-------------
Q 040384 71 AFGRAVTEGNVHEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDN-VFY------------- 136 (224)
Q Consensus 71 ~~g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~-~~~------------- 136 (224)
..|| +++++..++|+|+++|++++|++|+|||+++|||| +|+|++||++|++.+|++.+++ +.+
T Consensus 26 se~G-~~e~~~~~~~~L~~~gvs~~R~~i~pggl~lPh~~-~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~~ 103 (496)
T 3ksc_A 26 SEGG-LIETWNPNNKQFRCAGVALSRATLQRNALRRPYYS-NAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRR 103 (496)
T ss_dssp ETTE-EEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECCEEEEEECTTCCCC--------------
T ss_pred CCCc-EEEeccccchhhccCCceEEEEEecCCCEeCceEc-CCCEEEEEEeCceEEEEEeCCCCccchhhhhcccccccc
Confidence 4556 67778899999999999999999999999999999 9999999999999999999862 323
Q ss_pred -------EEEECCCCEEEecCCCeeEEEecCCccEEEEEEeeCCCCc--------ceehh--------------------
Q 040384 137 -------SKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSFNSQLPG--------TQFVH-------------------- 181 (224)
Q Consensus 137 -------~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~~s~~pg--------~~~~~-------------------- 181 (224)
.++|++||||+||+|++||++|.|+++++++++|+..++. .+.++
T Consensus 104 ~~d~~qk~~~l~~GDV~viPaG~~h~~~N~G~~~lv~v~~~d~~n~~NQld~~~r~F~LaG~~~~~~~~~~~~~~~~~~~ 183 (496)
T 3ksc_A 104 YRDRHQKVNRFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDIRSSNNQLDQMPRRFYLAGNHEQEFLQYQHQQGGKQEQ 183 (496)
T ss_dssp -CCCCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTGGGCC--------
T ss_pred cccchheeeccCCCCEEEECCCCcEEEEcCCCCCEEEEEEeccCcccccCCCceeeeEecCCCccccccccccccccccc
Confidence 3599999999999999999999999999999999866543 23332
Q ss_pred ----hhhhcCCCCCCHHHHHhhcCCCHHHHHHHH--hccCCCcceecC
Q 040384 182 ----SSLFNTTPPIPNEVLTKTFLVGDEVINAIK--AAITSAQLGHRP 223 (224)
Q Consensus 182 ----~~lf~~~p~~p~evla~af~v~~~~v~~l~--~~~~~~~~i~r~ 223 (224)
.++|++ |+.++|+.||+++.++++||+ +..+.++.|||-
T Consensus 184 ~~~~~ni~sg---F~~e~La~Af~v~~e~~~kl~~~~~~~~rg~IV~v 228 (496)
T 3ksc_A 184 ENEGNNIFSG---FKRDFLEDAFNVNRHIVDRLQGRNEDEEKGAIVKV 228 (496)
T ss_dssp ---CCSGGGG---SCHHHHHHHHTCCHHHHHHHTTTTCCTTTCSEEEC
T ss_pred cccCCCchhh---cCHHHHHHHHCCCHHHHHHHHhhcccccCccEEEe
Confidence 479997 999999999999999999999 677778888863
No 18
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.95 E-value=8.8e-28 Score=222.83 Aligned_cols=149 Identities=17% Similarity=0.279 Sum_probs=128.7
Q ss_pred CCCCceEEEeecccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCC-eEE------------
Q 040384 70 NAFGRAVTEGNVHEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDN-VFY------------ 136 (224)
Q Consensus 70 ~~~g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~-~~~------------ 136 (224)
...||.+..++ .+.+.|+++|++++|++++|||+.+|||| +++|++||++|++++|++.+++ +.|
T Consensus 29 ~se~G~~e~~d-~~~~~l~~~gvs~~R~~i~P~gl~~Ph~h-~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~~~~~~~~ 106 (465)
T 3qac_A 29 QAERGLTEVWD-SNEQEFRCAGVSVIRRTIEPHGLLLPSFT-SAPELIYIEQGNGITGMMIPGCPETYESGSQQFQGGED 106 (465)
T ss_dssp EETTEEEEECC-TTSHHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECEEEEEEECTTCCCCC------------
T ss_pred eCCCcEEEEEC-CCChhhcccceEEEEEEEcCCcCcccEEc-CCCEEEEEEECcEEEEEecCCCCceeecchhccccccc
Confidence 34677555554 56689999999999999999999999999 9999999999999999998753 222
Q ss_pred ------------------------EEEECCCCEEEecCCCeeEEEecCCccEEEEEEeeCCC---------Ccceehh--
Q 040384 137 ------------------------SKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSFNSQL---------PGTQFVH-- 181 (224)
Q Consensus 137 ------------------------~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~~s~~---------pg~~~~~-- 181 (224)
.+++++||++++|+|++||++|+|++++++++++++.| +..+.++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~n~~nqld~~~~r~F~LaG~ 186 (465)
T 3qac_A 107 ERIREQGSRKFGMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILIDTANHANQLDKNFPTRFYLAGK 186 (465)
T ss_dssp ------------------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEECTTSTTCCSCSSSCCEEESSSC
T ss_pred cccccccccccccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCCCcccccccccceeEEecCC
Confidence 45899999999999999999999999999999998654 3445554
Q ss_pred ----------------------hhhhcCCCCCCHHHHHhhcCCCHHHHHHHHhccCCCcceecC
Q 040384 182 ----------------------SSLFNTTPPIPNEVLTKTFLVGDEVINAIKAAITSAQLGHRP 223 (224)
Q Consensus 182 ----------------------~~lf~~~p~~p~evla~af~v~~~~v~~l~~~~~~~~~i~r~ 223 (224)
.++|++ |++++|++||+++.++++||++.+++++.|+|-
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~ni~sg---F~~e~La~Af~v~~~~~~kl~~~q~~rG~Ivrv 247 (465)
T 3qac_A 187 PQQEHSGEHQFSRESRRGERNTGNIFRG---FETRLLAESFGVSEEIAQKLQAEQDDRGNIVRV 247 (465)
T ss_dssp CCCSCC--------------CCCCGGGG---SCHHHHHHHHTCCHHHHHHHHTTTCCSCSEEEC
T ss_pred Cccccccccccccccccccccccchhhc---CCHHHHHHHhCCCHHHHHHhhhccccceeEEEe
Confidence 369997 999999999999999999999999888888863
No 19
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.95 E-value=2.1e-27 Score=221.54 Aligned_cols=148 Identities=14% Similarity=0.187 Sum_probs=125.4
Q ss_pred CCCCceEEEeecccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeE--------------
Q 040384 70 NAFGRAVTEGNVHEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVF-------------- 135 (224)
Q Consensus 70 ~~~g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~-------------- 135 (224)
...+| .++++..+.|+|+++|++++|++|+|||+++||||+ ++|++||++|++++++++++++.
T Consensus 27 ~se~G-~~e~~~~~~~~l~~~gvs~~r~~l~Pggl~~Ph~~~-a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~ 104 (476)
T 1fxz_A 27 ESEGG-LIETWNPNNKPFQCAGVALSRCTLNRNALRRPSYTN-GPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQS 104 (476)
T ss_dssp EETTE-EEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEEES-SCEEEEEEECCEEEEEECTTCCCC-------------
T ss_pred ecCCc-eEEeeCCCChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEecEEEEEEEcCCCcchhhccccccccccc
Confidence 34566 455677778999999999999999999999999995 89999999999999999987531
Q ss_pred --------EEEEECCCCEEEecCCCeeEEEecCCccEEEEEEeeCCCC--------cceehh------------------
Q 040384 136 --------YSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSFNSQLP--------GTQFVH------------------ 181 (224)
Q Consensus 136 --------~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~~s~~p--------g~~~~~------------------ 181 (224)
..++|++||+++||+|++||++|.|++++++++++++.++ ..+.++
T Consensus 105 ~~~~d~~qk~~~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~ 184 (476)
T 1fxz_A 105 SRPQDRHQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFLKYQQEQGGHQ 184 (476)
T ss_dssp -----CCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTHHHHC------
T ss_pred cccccccceEEEEeCCCEEEECCCCcEEEEeCCCCCEEEEEEecCCCcccccCCccceeeccCCcccccccccccccccc
Confidence 2579999999999999999999999999999999985553 334443
Q ss_pred --------------hhhhcCCCCCCHHHHHhhcCCCHHHHHHHHhccC--CCcceec
Q 040384 182 --------------SSLFNTTPPIPNEVLTKTFLVGDEVINAIKAAIT--SAQLGHR 222 (224)
Q Consensus 182 --------------~~lf~~~p~~p~evla~af~v~~~~v~~l~~~~~--~~~~i~r 222 (224)
.++|++ |++++|++||+++.++++||++.+. +++.|+|
T Consensus 185 ~~~~~~~~~~~~~~~~if~g---f~~~vLa~af~v~~~~~~kl~~~~~~~~~g~Iv~ 238 (476)
T 1fxz_A 185 SQKGKHQQEEENEGGSILSG---FTLEFLEHAFSVDKQIAKNLQGENEGEDKGAIVT 238 (476)
T ss_dssp -------------CCCGGGG---SCHHHHHHHHTCCHHHHHHHSCC-----CCSEEE
T ss_pred ccccccccccccccchhhhc---CCHHHHHhhhCCCHHHHHhhhccccccccccEEE
Confidence 379987 9999999999999999999999888 6778876
No 20
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.94 E-value=4.5e-27 Score=214.87 Aligned_cols=164 Identities=13% Similarity=0.100 Sum_probs=135.7
Q ss_pred CCCeeeeccC-CCcccCCCCceEEEe--ecccCCCCcccc-EEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEe
Q 040384 55 SDDFFFDLSE-EGNLSNAFGRAVTEG--NVHEFPGVNTQG-ISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIIT 130 (224)
Q Consensus 55 ~~df~f~l~~-~~~~~~~~g~~~~~~--~~~~~P~l~~~g-is~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~ 130 (224)
.+.|+|.... -.+.....||.++.+ +..+.|.|+++| +++++++++|||+++|||| +++|++||++|++++++++
T Consensus 11 ~~p~~f~~~~~~~~~~~~e~G~i~~l~~~~~~~~~l~~~~~~s~~~~~l~pgg~~~ph~~-~a~ei~yVl~G~~~v~~v~ 89 (397)
T 2phl_A 11 DNPFYFNSDNSWNTLFKNQYGHIRVLQRFDQQSKRLQNLEDYRLVEFRSKPETLLLPQQA-DAELLLVVRSGSAILVLVK 89 (397)
T ss_dssp CCTTEECGGGTEEEEEEETTEEEEEECCHHHHCGGGGGGTTCEEEEEEECSSEEEEEEEE-SEEEEEEEEESEEEEEEEE
T ss_pred CCCcEeccchhccceEEcCCEEEEEecccCCCChhhcccccEEEEEEEECCCcCccCEec-CCCeEEEEEeeeEEEEEEe
Confidence 4567774333 212346788888887 667779999998 9999999999999999999 8999999999999999999
Q ss_pred CCCeEEEEEECCCCE------EEecCCCeeEEEecC-CccEEEEEEeeCCC-C--cceehh-----hhhhcCCCCCCHHH
Q 040384 131 TDNVFYSKVVTAGML------FLIPRGLVHFQLNVG-KENVLFFPSFNSQL-P--GTQFVH-----SSLFNTTPPIPNEV 195 (224)
Q Consensus 131 ~~~~~~~~~l~~GDv------~vvP~G~~H~~~N~G-~~~a~~~~~~~s~~-p--g~~~~~-----~~lf~~~p~~p~ev 195 (224)
++++ .++.|++||+ ++||+|.+||++|.| ++++.+++++++.+ | ..+.++ .++|++ ||++|
T Consensus 90 ~~~~-~~~~l~~GDv~~~~~~~~iP~G~~h~~~N~g~~~~l~~i~~~~~~~~~~~~~f~L~G~~~~~s~~~~---~~~~v 165 (397)
T 2phl_A 90 PDDR-REYFFLTSDNPIFSDHQKIPAGTIFYLVNPDPKEDLRIIQLAMPVNNPQIHEFFLSSTEAQQSYLQE---FSKHI 165 (397)
T ss_dssp TTTE-EEEEEEESSCTTSCSEEEECTTCEEEEEECCSSCCEEEEEEEEESSSSSCCEEECCCBTTBCCGGGG---SCHHH
T ss_pred CCCc-EEEEECCCCcccccceEEECCCCcEEEEeCCCCCCeEEEEeecCCCCccceeeeccCCCchhHHhhc---CCHHH
Confidence 8777 5899999999 999999999999999 78999999987543 3 234443 257886 99999
Q ss_pred HHhhcCCCHHHHHHHHhccC--CCcceecC
Q 040384 196 LTKTFLVGDEVINAIKAAIT--SAQLGHRP 223 (224)
Q Consensus 196 la~af~v~~~~v~~l~~~~~--~~~~i~r~ 223 (224)
|+++|+++.+++++|+.... +++.|+|.
T Consensus 166 La~af~v~~~~v~~l~~~~~~q~~~~Iv~~ 195 (397)
T 2phl_A 166 LEASFNSKFEEINRVLFEEEGQQEGVIVNI 195 (397)
T ss_dssp HHHHHTSCHHHHHHHHTCSTTCBSSSEEEC
T ss_pred HHHHhCCCHHHHHhhhhcccccccCceEEc
Confidence 99999999999999994443 45677765
No 21
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.94 E-value=2.4e-26 Score=212.95 Aligned_cols=163 Identities=13% Similarity=0.136 Sum_probs=133.1
Q ss_pred CCCeeeeccCCCcccCCCCceEEEeec--ccCCCCcccc-EEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeC
Q 040384 55 SDDFFFDLSEEGNLSNAFGRAVTEGNV--HEFPGVNTQG-ISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITT 131 (224)
Q Consensus 55 ~~df~f~l~~~~~~~~~~g~~~~~~~~--~~~P~l~~~g-is~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~ 131 (224)
.+.|+|............+|.+..++. .+.|.++++| +++++++++|||+.+|| |++++|++||++|+++++++++
T Consensus 46 ~~p~vf~~~~~~~~i~~e~G~i~~l~~~~~~~~~l~~~g~~s~~~~~l~Pgg~~~pH-h~~a~E~~yVl~G~g~v~~v~~ 124 (445)
T 2cav_A 46 NNPYLFRSNKFLTLFKNQHGSLRLLQRFNEDTEKLENLRDYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVNP 124 (445)
T ss_dssp CCTTEECGGGEEEEEEETTEEEEEECCTTSSCSTTGGGTTEEEEEEEECSSEEEEEE-EESSEEEEEEEESEEEEEEEET
T ss_pred CCCeEEchhhcCceEEcCCEEEEEEeccCcccccccccCcEEEEEEEECCCcCccCc-CCCCceEEEEEeCEEEEEEEeC
Confidence 455677433221122346777777643 5667999988 99999999999999999 6699999999999999999987
Q ss_pred CCeEEEEEECCCCEEEecCCCeeEEEecC-CccEEEEEEee-CCCCcc---eehh-----hhhhcCCCCCCHHHHHhhcC
Q 040384 132 DNVFYSKVVTAGMLFLIPRGLVHFQLNVG-KENVLFFPSFN-SQLPGT---QFVH-----SSLFNTTPPIPNEVLTKTFL 201 (224)
Q Consensus 132 ~~~~~~~~l~~GDv~vvP~G~~H~~~N~G-~~~a~~~~~~~-s~~pg~---~~~~-----~~lf~~~p~~p~evla~af~ 201 (224)
+++ +.+.+++||++++|+|..||++|.| +++++++++++ +++|+. +.++ .++|++ +|++||+++|+
T Consensus 125 ~~~-~~~~l~~GDv~~~P~G~~H~~~N~g~~~~l~~l~v~~~~~~pg~~~~F~laG~~~~~~~~~~---~~~~vLa~af~ 200 (445)
T 2cav_A 125 DGR-DTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLSA---FSKNFLEASYD 200 (445)
T ss_dssp TEE-EEEEEETTEEEEECTTCCEEEEECCSSCCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGGG---SCHHHHHHHHT
T ss_pred CCC-EEEEecCCCEEEECCCCcEEEEECCCCCCEEEEEEeccCCCCCceeeeeccCCCchhhhhhc---CCHHHHHHHhC
Confidence 655 7899999999999999999999999 89999999887 556653 3344 368887 99999999999
Q ss_pred CCHHHHHHHHhccCCCcceec
Q 040384 202 VGDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 202 v~~~~v~~l~~~~~~~~~i~r 222 (224)
++++++++|++...+++.|+|
T Consensus 201 v~~~~v~~l~~~~~~~g~Iv~ 221 (445)
T 2cav_A 201 SPYDEIEQTLLQEEQEGVIVK 221 (445)
T ss_dssp SCHHHHHHHTTSCCSSSSEEE
T ss_pred CCHHHHHhhhcccCCCCcEEE
Confidence 999999999976666677775
No 22
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.94 E-value=2e-26 Score=211.88 Aligned_cols=162 Identities=17% Similarity=0.171 Sum_probs=133.3
Q ss_pred CCeeee-ccCCCcccCCCCceEEEe--ecccCCCCcccc-EEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeC
Q 040384 56 DDFFFD-LSEEGNLSNAFGRAVTEG--NVHEFPGVNTQG-ISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITT 131 (224)
Q Consensus 56 ~df~f~-l~~~~~~~~~~g~~~~~~--~~~~~P~l~~~g-is~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~ 131 (224)
+.|+|. ...........||++..+ +..+.+.|++++ +++++++++||++.+|| |++++|++||++|+++++++++
T Consensus 9 ~p~~f~~~~~~~~~~~~e~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~E~~yVl~G~g~v~~v~~ 87 (416)
T 1uij_A 9 NPFYFRSSNSFQTLFENQNGRIRLLQRFNKRSPQLENLRDYRIVQFQSKPNTILLPH-HADADFLLFVLSGRAILTLVNN 87 (416)
T ss_dssp CTTEECGGGSEEEEEECSSEEEEEECCHHHHCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESCEEEEEECS
T ss_pred CCeEecccccccceEEcCCEEEEEEeccCCccccccCcccEEEEEEEeccCcCcccc-cCCCceEEEEEeeEEEEEEEEC
Confidence 456664 433333345678888887 445668999998 99999999999999999 6699999999999999999987
Q ss_pred CCeEEEEEECCCCEEEecCCCeeEEEecC-CccEEEEEEee-CCCCcc---eehhh-----hhhcCCCCCCHHHHHhhcC
Q 040384 132 DNVFYSKVVTAGMLFLIPRGLVHFQLNVG-KENVLFFPSFN-SQLPGT---QFVHS-----SLFNTTPPIPNEVLTKTFL 201 (224)
Q Consensus 132 ~~~~~~~~l~~GDv~vvP~G~~H~~~N~G-~~~a~~~~~~~-s~~pg~---~~~~~-----~lf~~~p~~p~evla~af~ 201 (224)
++.+++.+++||++++|+|..||++|.| +++++++++++ +++|+. +.+++ ++|++ +|++||+++|+
T Consensus 88 -~~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e~l~~l~~~~~~~~pg~~~~f~l~g~~~~~~~~~~---~~~~vLa~af~ 163 (416)
T 1uij_A 88 -DDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQNLKMIWLAIPVNKPGRYDDFFLSSTQAQQSYLQG---FSHNILETSFH 163 (416)
T ss_dssp -SCEEEEEECTTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEESSCBSSCCCGGGG---SCHHHHHHHHT
T ss_pred -CCCeEEEecCCCEEEECCCCeEEEEecCCCCCEEEEEEeccCCCCCcceeeeecCCcccchhhhc---CCHHHHHHHhC
Confidence 5567899999999999999999999995 99999999886 556653 34543 47886 99999999999
Q ss_pred CCHHHHHHHH-hccC----CCcceec
Q 040384 202 VGDEVINAIK-AAIT----SAQLGHR 222 (224)
Q Consensus 202 v~~~~v~~l~-~~~~----~~~~i~r 222 (224)
++++++++|+ +.++ +++.|+|
T Consensus 164 v~~~~v~~l~~~~~~~~~~~~g~Iv~ 189 (416)
T 1uij_A 164 SEFEEINRVLFGEEEEQRQQEGVIVE 189 (416)
T ss_dssp SCHHHHHHHHTCTTCGGGSBSSSEEE
T ss_pred cCHHHHHhhhhccccccccCcceEEE
Confidence 9999999999 6653 4567775
No 23
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.94 E-value=2.3e-26 Score=212.45 Aligned_cols=163 Identities=17% Similarity=0.170 Sum_probs=132.7
Q ss_pred CCCeeeeccC-CCcccCCCCceEEEe--ecccCCCCcccc-EEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEe
Q 040384 55 SDDFFFDLSE-EGNLSNAFGRAVTEG--NVHEFPGVNTQG-ISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIIT 130 (224)
Q Consensus 55 ~~df~f~l~~-~~~~~~~~g~~~~~~--~~~~~P~l~~~g-is~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~ 130 (224)
.+.|+|.+.. -.......||++..+ +..+.|.|++++ +++++++++|||+++|| |++++|++||++|++++++++
T Consensus 20 ~~p~~f~~~~~~~~~~~se~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~Ei~yVl~G~g~v~~v~ 98 (434)
T 2ea7_A 20 NNPFYFNSDRWFRTLYRNEWGHIRVLQRFDQRSKQMQNLENYRVVEFKSKPNTLLLPH-HADADFLLVVLNGTAVLTLVN 98 (434)
T ss_dssp GCTTEECTTTSEEEEEEETTEEEEEECCSTTTCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEEC
T ss_pred CCCeEEeccccccceEEcCCEEEEEEeccCCcccccCccccEEEEEEEecCCcCccCc-cCCCceEEEEEecEEEEEEEe
Confidence 3557775444 222335678888887 446778999998 99999999999999999 779999999999999999998
Q ss_pred CCCeEEEEEECCCCEEEecCCCeeEEEecC-CccEEEEEEee-CCCCcc---eehhh-----hhhcCCCCCCHHHHHhhc
Q 040384 131 TDNVFYSKVVTAGMLFLIPRGLVHFQLNVG-KENVLFFPSFN-SQLPGT---QFVHS-----SLFNTTPPIPNEVLTKTF 200 (224)
Q Consensus 131 ~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G-~~~a~~~~~~~-s~~pg~---~~~~~-----~lf~~~p~~p~evla~af 200 (224)
++ +.+.+.+++||++++|+|..||++|.| +++++++++++ +++|+. +.+++ ++|++ +|++||+++|
T Consensus 99 ~~-~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e~l~~l~~~~~s~~pg~~~~f~l~g~~~~~~~~~~---~~~~vLa~af 174 (434)
T 2ea7_A 99 PD-SRDSYILEQGHAQKIPAGTTFFLVNPDDNENLRIIKLAIPVNNPHRFQDFFLSSTEAQQSYLRG---FSKNILEASF 174 (434)
T ss_dssp SS-CEEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEECSCCSSCCCGGGG---SCHHHHHHHH
T ss_pred CC-CCEEEEeCCCCEEEECCCccEEEEeCCCCCCeEEEEEecCCCCCCceeeeeecCCcchhhhhhc---CCHHHHHHHh
Confidence 54 467899999999999999999999998 88999999875 566653 34554 47886 9999999999
Q ss_pred CCCHHHHHHHH-hccC---------CCcceec
Q 040384 201 LVGDEVINAIK-AAIT---------SAQLGHR 222 (224)
Q Consensus 201 ~v~~~~v~~l~-~~~~---------~~~~i~r 222 (224)
+++.+++++|+ +.++ +++.|+|
T Consensus 175 ~v~~~~v~~l~~~~~~~~~~~~~~q~~g~Iv~ 206 (434)
T 2ea7_A 175 DSDFKEINRVLFGEERQQQQGEESREEGVIVE 206 (434)
T ss_dssp TSCHHHHHHHHTCC---------CCCSSSEEE
T ss_pred CCCHHHHHhhhhcccccccccccccccceEEE
Confidence 99999999999 6542 4567765
No 24
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.94 E-value=1.3e-26 Score=216.96 Aligned_cols=147 Identities=16% Similarity=0.288 Sum_probs=127.3
Q ss_pred CCCceEEEeecccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCe----------------
Q 040384 71 AFGRAVTEGNVHEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNV---------------- 134 (224)
Q Consensus 71 ~~g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~---------------- 134 (224)
..|| +++++..+.|+|+++|+++++++|.|||+++||||+ ++|++||++|+++++++.+++.
T Consensus 25 se~G-~~e~~~~~~~~l~~~gv~~~r~~i~pggl~~Ph~~~-~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~ 102 (493)
T 2d5f_A 25 SEGG-LIETWNSQHPELQCAGVTVSKRTLNRNGLHLPSYSP-YPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSR 102 (493)
T ss_dssp CSSE-EEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECEEEEEECCTTCCCCEEECC---------
T ss_pred cCCc-EEEEeCCCChhhccCCEEEEEEEeCCCcEeCceecC-CCeEEEEEeCEEEEEEEeCCCccccccccccccccccc
Confidence 3466 677788888999999999999999999999999995 7899999999999999976631
Q ss_pred ---------EEEEEECCCCEEEecCCCeeEEEecCCccEEEEEEeeCCCC--------cceehh----------------
Q 040384 135 ---------FYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSFNSQLP--------GTQFVH---------------- 181 (224)
Q Consensus 135 ---------~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~~s~~p--------g~~~~~---------------- 181 (224)
-..+.|++||+++||+|++||++|.|+++++++++++..+. ..+.++
T Consensus 103 ~~~~~~d~~qkv~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~ 182 (493)
T 2d5f_A 103 SQQQLQDSHQKIRHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDTSNFNNQLDQNPRVFYLAGNPDIEHPETMQQQQQ 182 (493)
T ss_dssp ----CSEEESCEEEEETTEEEEECTTCCEEEEECSSSCEEEEEEECTTCTTCCSCSSCCCEESSSCCCCSCGGGTC----
T ss_pred cccccccccceEEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEecCcCcccccccccceeeccCCccccchhhhhhccc
Confidence 02468999999999999999999999999999999984432 334444
Q ss_pred -------------------hhhhcCCCCCCHHHHHhhcCCCHHHHHHHHhccCCCcceec
Q 040384 182 -------------------SSLFNTTPPIPNEVLTKTFLVGDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 182 -------------------~~lf~~~p~~p~evla~af~v~~~~v~~l~~~~~~~~~i~r 222 (224)
.++|++ |++++|++||+++.++++||++.+.+++.|+|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~nif~g---f~~e~La~aF~v~~~~v~kl~~~~~~~g~Iv~ 239 (493)
T 2d5f_A 183 QKSHGGRKQGQHQQQEEEGGSVLSG---FSKHFLAQSFNTNEDTAEKLRSPDDERKQIVT 239 (493)
T ss_dssp -----------------CCCCGGGG---SCHHHHHHHTTCCHHHHHHTTCTTCCSCSEEE
T ss_pred ccccccccccccccccccccchhhc---CCHHHHHhHhCCCHHHHHHhhhcccCcccEEE
Confidence 378986 99999999999999999999999998888886
No 25
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.94 E-value=1.8e-26 Score=215.90 Aligned_cols=150 Identities=13% Similarity=0.253 Sum_probs=128.4
Q ss_pred cCCCCceEEEeecccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeE-E-----------
Q 040384 69 SNAFGRAVTEGNVHEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVF-Y----------- 136 (224)
Q Consensus 69 ~~~~g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~-~----------- 136 (224)
....|| +++++..++|+|+++|++++|++|.|+|+++||||+ |+|++||++|++.+||+.|++.. |
T Consensus 26 i~se~G-~~e~w~~~~p~l~~~Gvs~~R~~i~p~Gl~lPh~~~-a~el~yV~qG~g~~G~v~Pgcpet~~~~~~~~~~~~ 103 (531)
T 3fz3_A 26 IQAEAG-QIETWNFNQGDFQCAGVAASRITIQRNGLHLPSYSN-APQLIYIVQGRGVLGAVFSGCPETFEESQQSSQQGR 103 (531)
T ss_dssp EEETTE-EEEECCTTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTCCCCEECCCC------
T ss_pred cccCCc-eEEEeCCCChhhccCcceEEEEEecCCCEeCCccCC-CCeEEEEEECcEEEEEEcCCCccccccccccccccc
Confidence 345666 667777889999999999999999999999999995 99999999999999999885310 0
Q ss_pred ---------------------------------------------------------------------EEEECCCCEEE
Q 040384 137 ---------------------------------------------------------------------SKVVTAGMLFL 147 (224)
Q Consensus 137 ---------------------------------------------------------------------~~~l~~GDv~v 147 (224)
...+++||++.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~vr~GDvia 183 (531)
T 3fz3_A 104 QQEQEQERQQQQQGEQGRQQGQQEQQQERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFRQLDRHQKTRRIREGDVVA 183 (531)
T ss_dssp -------------------------------------------------------------CCSCEESCCEEEETTEEEE
T ss_pred cccccccccccccccccccccccccccccccccccchhccccccccccccccccccccccccccccceeeecccCCcEEE
Confidence 25789999999
Q ss_pred ecCCCeeEEEecCCccEEEEEEeeCCCC--------cceehh--------------------------------------
Q 040384 148 IPRGLVHFQLNVGKENVLFFPSFNSQLP--------GTQFVH-------------------------------------- 181 (224)
Q Consensus 148 vP~G~~H~~~N~G~~~a~~~~~~~s~~p--------g~~~~~-------------------------------------- 181 (224)
||+|.+||++|+|+++++++++++..|. ..++++
T Consensus 184 iPaG~~~w~yN~G~~~l~iv~~~Dt~n~~NQld~~~r~F~LAGn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (531)
T 3fz3_A 184 IPAGVAYWSYNDGDQELVAVNLFHVSSDHNQLDQNPRKFYLAGNPENEFNQQGQSQPRQQGEQGRPGQHQQPFGRPRQQE 263 (531)
T ss_dssp ECTTCCEEEECCSSSCEEEEEEEETTCTTCCSCSSCCEEESSSCCCCTTCC-----------------------------
T ss_pred ECCCCeEEEEeCCCceEEEEEEEccccccccCCCccceeEEcCCCcccccccccccccccccccccccccccccccchhh
Confidence 9999999999999999999999975442 223332
Q ss_pred -----hhhhcCCCCCCHHHHHhhcCCCHHHHHHHHhccCCCcceecC
Q 040384 182 -----SSLFNTTPPIPNEVLTKTFLVGDEVINAIKAAITSAQLGHRP 223 (224)
Q Consensus 182 -----~~lf~~~p~~p~evla~af~v~~~~v~~l~~~~~~~~~i~r~ 223 (224)
.++|++ |+.++|++||+++.++++||++.++.++.|||-
T Consensus 264 ~~~~~~nifsG---Fs~e~La~A~~v~~~~a~kLq~~~~~rg~IVrv 307 (531)
T 3fz3_A 264 QQGNGNNVFSG---FNTQLLAQALNVNEETARNLQGQNDNRNQIIQV 307 (531)
T ss_dssp ---CCSSGGGG---SCHHHHHHHHTSCHHHHHHHHTSSCCSCSEEEC
T ss_pred hcccCCCeeec---CCHHHHHHHHCCCHHHHHHHhcccccCceEEEe
Confidence 379997 999999999999999999999999889999874
No 26
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.93 E-value=3.9e-26 Score=211.86 Aligned_cols=149 Identities=16% Similarity=0.247 Sum_probs=126.5
Q ss_pred CCCCceEEEeecccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeE-E------------
Q 040384 70 NAFGRAVTEGNVHEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVF-Y------------ 136 (224)
Q Consensus 70 ~~~g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~-~------------ 136 (224)
...||.+..++ .+-|+|+++|++++|++++|||+++||||+ |+|++||++|++++|++.+++.. +
T Consensus 22 ~se~G~~e~w~-~~~~~L~~~gvs~~r~~i~p~Gl~lPh~~~-a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~ 99 (466)
T 3kgl_A 22 KAEAGRIEVWD-HHAPQLRCSGVSFVRYIIESKGLYLPSFFS-TAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGS 99 (466)
T ss_dssp EETTEEEEECC-TTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC--
T ss_pred eCCCcEEEEEC-CCChhhccCCeEEEEEEECCCCEeCCeeCC-CCeEEEEEeCeEEEEEecCCCcchhhccccccccccc
Confidence 45677555555 455999999999999999999999999995 99999999999999999885321 1
Q ss_pred ----------------------------------------------EEEECCCCEEEecCCCeeEEEecCCccEEEEEEe
Q 040384 137 ----------------------------------------------SKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSF 170 (224)
Q Consensus 137 ----------------------------------------------~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~ 170 (224)
...|++||+++||+|++||++|.|++++++++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~ 179 (466)
T 3kgl_A 100 PFGEGQGQGQQGQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVL 179 (466)
T ss_dssp ---------------------------------------CCEEESCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccceeeccccCCCEEEECCCCcEEEEeCCCCcEEEEEEE
Confidence 1489999999999999999999999999999999
Q ss_pred eCCCC--------cceehh------------------hhhhcCCCCCCHHHHHhhcCCCHHHHHHHHhccCCCcceecC
Q 040384 171 NSQLP--------GTQFVH------------------SSLFNTTPPIPNEVLTKTFLVGDEVINAIKAAITSAQLGHRP 223 (224)
Q Consensus 171 ~s~~p--------g~~~~~------------------~~lf~~~p~~p~evla~af~v~~~~v~~l~~~~~~~~~i~r~ 223 (224)
+..|. ..+.++ .++|++ |+.++|++||+++.++++||+..+++++.|+|-
T Consensus 180 d~~n~~nQld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ni~sG---F~~e~La~Af~v~~e~~~kL~~~q~~~G~Iv~v 255 (466)
T 3kgl_A 180 DLASHQNQLDRNPRPFYLAGNNPQGQVWIEGREQQPQKNILNG---FTPEVLAKAFKIDVRTAQQLQNQQDNRGNIIRV 255 (466)
T ss_dssp ESSSTTCCSCSSCCEEESSCCBTTCCTTSTTCTTCCBCCGGGG---SCHHHHHHHHTSCHHHHHHHTCTTCCSCSEEEC
T ss_pred cCCCcccccCCceeeeEecCCCccccccccccccccCCCcccc---CCHHHHHHHhCCCHHHHHHHhccccCceeEEEe
Confidence 76543 334554 278886 999999999999999999999998888888863
No 27
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.93 E-value=7.2e-26 Score=212.18 Aligned_cols=149 Identities=13% Similarity=0.193 Sum_probs=127.3
Q ss_pred CCCCceEEEeecccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeE--------------
Q 040384 70 NAFGRAVTEGNVHEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVF-------------- 135 (224)
Q Consensus 70 ~~~g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~-------------- 135 (224)
...|| +++++..+.|+|+++|++++|++|+|||+.+|||| +++|++||++|+++++++++++..
T Consensus 27 ~se~G-~~e~~~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~-~a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~ 104 (510)
T 3c3v_A 27 ESEGG-YIETWNPNNQEFECAGVALSRLVLRRNALRRPFYS-NAPQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQS 104 (510)
T ss_dssp EETTE-EEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEEC-SSCEEEEEEECCEEEEEECTTCCCCEEEECCC------
T ss_pred ccCCc-eEEEeCCCCcccccCcEEEEEEEECCCCCccceec-CCCeEEEEEeCEEEEEEEeCCCcccccccccccccccc
Confidence 34566 67778888899999999999999999999999999 589999999999999999876410
Q ss_pred ---------------------EEEEECCCCEEEecCCCeeEEEecCCccEEEEEEeeCCCC--------cceehh-----
Q 040384 136 ---------------------YSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSFNSQLP--------GTQFVH----- 181 (224)
Q Consensus 136 ---------------------~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~~s~~p--------g~~~~~----- 181 (224)
..+.|++||+++||+|++||++|.|+++++++++++..|+ ..+.++
T Consensus 105 ~~~~~~~~~~~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~n~~nqld~~~r~F~LaG~~~~ 184 (510)
T 3c3v_A 105 QRPPRRLQEEDQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTNNNDNQLDQFPRRFNLAGNHEQ 184 (510)
T ss_dssp --------------CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTBTTCCSCSCCCCEESSCCCCC
T ss_pred ccccccccccccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCCCcccccccccceeEecCCccc
Confidence 1268999999999999999999999999999999986653 223332
Q ss_pred -------------------------------------------------------hhhhcCCCCCCHHHHHhhcCCC-HH
Q 040384 182 -------------------------------------------------------SSLFNTTPPIPNEVLTKTFLVG-DE 205 (224)
Q Consensus 182 -------------------------------------------------------~~lf~~~p~~p~evla~af~v~-~~ 205 (224)
.++|++ |++++|+++|+++ ++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~sg---F~~~~La~af~v~~~~ 261 (510)
T 3c3v_A 185 EFLRYQQQSRQSRRRSLPYSPYSPQSQPRQEEREFSPRGQHSRRERAGQEEEHEGGNIFSG---FTPEFLAQAFQVDDRQ 261 (510)
T ss_dssp TTGGGCC------------------------------------------------CCTGGG---SCHHHHHHHHTCCCHH
T ss_pred ccchhhhccccccccccccccccccccccccccccccccccccccccccccccccccceec---CCHHHHHHHhCCCHHH
Confidence 268897 9999999999999 99
Q ss_pred HHHHHHhccC--CCcceecC
Q 040384 206 VINAIKAAIT--SAQLGHRP 223 (224)
Q Consensus 206 ~v~~l~~~~~--~~~~i~r~ 223 (224)
++++|++.+. +++.|+|-
T Consensus 262 ~~~~l~~~~~~~~~g~Iv~v 281 (510)
T 3c3v_A 262 IVQNLRGENESEEQGAIVTV 281 (510)
T ss_dssp HHHHHTTTTCCTTSCSEEEC
T ss_pred HHHHhhccccccccccEEEe
Confidence 9999998887 67788763
No 28
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.93 E-value=1.1e-25 Score=207.03 Aligned_cols=151 Identities=15% Similarity=0.205 Sum_probs=117.5
Q ss_pred CCeeeeccCCCcccCCCCceEEEee-----cccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEe
Q 040384 56 DDFFFDLSEEGNLSNAFGRAVTEGN-----VHEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIIT 130 (224)
Q Consensus 56 ~df~f~l~~~~~~~~~~g~~~~~~~-----~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~ 130 (224)
+.|+|..+.=........|.+..+. +..+|+|+ ++++++++++|||+.+|| |++|+|++||++|++++++++
T Consensus 5 ~p~~f~~~~f~~~~~se~G~i~~l~~f~~~s~~l~~l~--~~~l~~~~l~p~gl~~Ph-h~~A~ei~yV~~G~g~~g~V~ 81 (418)
T 3s7i_A 5 NPFYFPSRRFSTRYGNQNGRIRVLQRFDQRSRQFQNLQ--NHRIVQIEAKPNTLVLPK-HADADNILVIQQGQATVTVAN 81 (418)
T ss_dssp CTTEECGGGEEEEEECSSEEEEEECCHHHHCGGGGGGT--TCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEEC
T ss_pred CCcccccccccceEEcCCcEEEEecccCCcchhccccc--ceEEEEEEecCCceeeee-eCCCCeEEEEEEeeEEEEEEe
Confidence 4466643221122356777788874 23555555 678889999999999999 789999999999999999999
Q ss_pred CCCeEEEEEECCCCEEEecCCCeeEEEecCCc-cEEEEEE-eeCCCCccee---hh-----hhhhcCCCCCCHHHHHhhc
Q 040384 131 TDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKE-NVLFFPS-FNSQLPGTQF---VH-----SSLFNTTPPIPNEVLTKTF 200 (224)
Q Consensus 131 ~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~-~a~~~~~-~~s~~pg~~~---~~-----~~lf~~~p~~p~evla~af 200 (224)
+++ .+.++|++||+++||+|++||++|.|+. .+.++++ +++++||.+. ++ .++|++ ||++||+++|
T Consensus 82 ~~~-~~~~~l~~GDv~~~P~G~~h~~~N~g~~~~l~i~~l~~~s~~pg~~~~f~laG~~~~~s~~~g---f~~evLa~af 157 (418)
T 3s7i_A 82 GNN-RKSFNLDEGHALRIPSGFISYILNRHDNQNLRVAKISMPVNTPGQFEDFFPASSRDQSSYLQG---FSRNTLEAAF 157 (418)
T ss_dssp SSC-EEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEECSSCCSSCCCGGGG---SCHHHHHHHH
T ss_pred cCC-EEEEEecCCCEEEECCCCeEEEEecCCCccEEEEEeecCcCCCCccceeeccCCcchhHHhhc---CCHHHHHHHH
Confidence 854 4689999999999999999999998755 4555543 4566787533 22 358886 9999999999
Q ss_pred CCCHHHHHHHHhc
Q 040384 201 LVGDEVINAIKAA 213 (224)
Q Consensus 201 ~v~~~~v~~l~~~ 213 (224)
+++++++++|+..
T Consensus 158 ~v~~~~v~kl~~~ 170 (418)
T 3s7i_A 158 NAEFNEIRRVLLE 170 (418)
T ss_dssp TSCHHHHHHHTTS
T ss_pred CcCHHHHHhhhcc
Confidence 9999999999844
No 29
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.92 E-value=2.1e-24 Score=193.33 Aligned_cols=157 Identities=18% Similarity=0.257 Sum_probs=139.2
Q ss_pred CCCccCCCeee-eccCCCcccCCCCceEEEeecccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEE
Q 040384 50 ETEVTSDDFFF-DLSEEGNLSNAFGRAVTEGNVHEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGI 128 (224)
Q Consensus 50 ~~~vt~~df~f-~l~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~ 128 (224)
+...+.++|+| .+..++ ..+..|++++.+...++|+++ ++++.++.++||+..++|||+++.|++||++|++++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~-~~~~~gg~~~~~~~~~~~~~~--~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v 270 (361)
T 2vqa_A 194 QTAKIEVPHTHNLLGQQP-LVSLGGNELRLASAKEFPGSF--NMTGALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTV 270 (361)
T ss_dssp CCCBCCSCCEEECTTSCC-SEEETTEEEEEECTTTCTTST--TCEEEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEE
T ss_pred cCCCCCcceEeccccCCC-cccCCCceEEEEehhhCcCcc--cceEEEEEECCCcccccccCCCCCEEEEEEeCEEEEEE
Confidence 44667889998 565554 346788999999999999988 57889999999999999999988999999999999999
Q ss_pred EeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEEeeCCCCcceehhhhhhcCCCCCCHHHHHhhcCCCHHHHH
Q 040384 129 ITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSFNSQLPGTQFVHSSLFNTTPPIPNEVLTKTFLVGDEVIN 208 (224)
Q Consensus 129 v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~~s~~pg~~~~~~~lf~~~p~~p~evla~af~v~~~~v~ 208 (224)
++++|+.....|++||++++|+|..|++.|.|++++.++.++...+++...++++ +++ +|++||+++|++++++++
T Consensus 271 ~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~~~~~~~~~~~~-~~~---~~~~vl~~~f~~~~~~~~ 346 (361)
T 2vqa_A 271 FASEGKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFNDGDYQSIDLSTW-LAS---NPSSVLGNTFQISPELTK 346 (361)
T ss_dssp ECSTTCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESSSSCCCEEHHHH-HHT---SCHHHHHHHHTCCHHHHT
T ss_pred EcCCCcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECCCCcceeeHHHH-hhh---CCHHHHHHHHCcCHHHHH
Confidence 8877776689999999999999999999999999999999999999999988875 575 999999999999999999
Q ss_pred HHHhc
Q 040384 209 AIKAA 213 (224)
Q Consensus 209 ~l~~~ 213 (224)
+|++.
T Consensus 347 ~l~~~ 351 (361)
T 2vqa_A 347 KLPVQ 351 (361)
T ss_dssp TSCCS
T ss_pred hhhcc
Confidence 99743
No 30
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.88 E-value=9e-22 Score=176.25 Aligned_cols=151 Identities=19% Similarity=0.248 Sum_probs=128.7
Q ss_pred CeeeeccCCCcccCCCCceEEEeecccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEE
Q 040384 57 DFFFDLSEEGNLSNAFGRAVTEGNVHEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFY 136 (224)
Q Consensus 57 df~f~l~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~ 136 (224)
.+.|.+....+. ...||.++.++..++|.+. ++++.++.+.||++.+||||+++.|++||++|++++++++++++..
T Consensus 20 ~~~~~~~~~~~~-~~~~G~~~~~~~~~~p~~~--~~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~ 96 (361)
T 2vqa_A 20 AFTYAFSKTPLV-LYDGGTTKQVGTYNFPVSK--GMAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGKVE 96 (361)
T ss_dssp CSEECGGGSCCE-EETTEEEEEESTTTCTTCC--SCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTTSCEE
T ss_pred ceEEEcccCCce-ecCCceEEEeChhhCcccc--ceeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEE
Confidence 366755444443 3478889999999999988 5799999999999999999988999999999999999998777545
Q ss_pred EEEECCCCEEEecCCCeeEEEecCCccEEEEEEeeCCCCc---ceehhhhhhcCCCCCCHHHHHhhcCCCHHHHHHHHhc
Q 040384 137 SKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSFNSQLPG---TQFVHSSLFNTTPPIPNEVLTKTFLVGDEVINAIKAA 213 (224)
Q Consensus 137 ~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~~s~~pg---~~~~~~~lf~~~p~~p~evla~af~v~~~~v~~l~~~ 213 (224)
...|++||++++|+|..|++.|.|+++++++.+++..++. .+... ++|++ +|.++|+++|+++.+.+++|++.
T Consensus 97 ~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v~~~~~~~~~~~~~~~-~~~~~---~p~~vLa~~~~v~~~~~~~l~~~ 172 (361)
T 2vqa_A 97 IADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLVFNDGTFSEGATFSVT-DWLSH---TPIAWVEENLGWTAAQVAQLPKK 172 (361)
T ss_dssp EEEEETTEEEEECTTCEEEEEECSSSCEEEEEEESSTTCCTTSSEEHH-HHHHT---SCHHHHHHHHTCCHHHHTTSCSS
T ss_pred EEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCccccceecHh-HHHHh---CCHHHHHHHhCcCHHHHHhcccc
Confidence 6899999999999999999999999999999999877665 34444 45676 99999999999999999999865
Q ss_pred c
Q 040384 214 I 214 (224)
Q Consensus 214 ~ 214 (224)
.
T Consensus 173 ~ 173 (361)
T 2vqa_A 173 Q 173 (361)
T ss_dssp C
T ss_pred C
Confidence 4
No 31
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.82 E-value=2.8e-19 Score=161.61 Aligned_cols=153 Identities=18% Similarity=0.301 Sum_probs=128.1
Q ss_pred cCCCeeeeccCCCcccCCCCceEEEeecccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCC
Q 040384 54 TSDDFFFDLSEEGNLSNAFGRAVTEGNVHEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDN 133 (224)
Q Consensus 54 t~~df~f~l~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~ 133 (224)
....|+|........ ...|+.++.+....++..+ ++++.++.++||+..++|||+.+.|++||++|++++.+.+++|
T Consensus 222 ~~~~~v~~~~~~~~~-~~~~g~~~~~~~~~~~~~~--~~~~~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~g 298 (385)
T 1j58_A 222 VPYPFTYRLLEQEPI-ESEGGKVYIADSTNFKVSK--TIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASDG 298 (385)
T ss_dssp CSSCSEEEGGGSCCE-ECSSEEEEEESTTTSTTCC--SCEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEETT
T ss_pred CCCCeeeecccCCCe-eCCCceEEEeecccCCccc--ceEEEEEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcCCC
Confidence 355677743333233 3456778888888888655 6899999999999999999988799999999999999876666
Q ss_pred eEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEEeeCCCCcceehhhhhhcCCCCCCHHHHHhhcCCCHHHHHHHHhc
Q 040384 134 VFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSFNSQLPGTQFVHSSLFNTTPPIPNEVLTKTFLVGDEVINAIKAA 213 (224)
Q Consensus 134 ~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~~s~~pg~~~~~~~lf~~~p~~p~evla~af~v~~~~v~~l~~~ 213 (224)
+-....|++||++++|+|..|++.|.|++++.++.++....+....+..++ +. +|+++++++|+++++++++|++.
T Consensus 299 ~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~~~~~~d~~~~~~l-~~---~~~~v~~~~f~~~~~~~~~l~~~ 374 (385)
T 1j58_A 299 HARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKDDHYADVSLNQWL-AM---LPETFVQAHLDLGKDFTDVLSKE 374 (385)
T ss_dssp EEEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEEESSSSCCCEEHHHHH-HT---SCHHHHHHHHTCCHHHHTTCCSS
T ss_pred cEEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEECCCCccccCHHHHH-Hh---CCHHHHHHHhCCCHHHHHhhhcc
Confidence 556789999999999999999999999999999999988777777776665 65 99999999999999999999854
No 32
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.81 E-value=9.5e-20 Score=164.66 Aligned_cols=147 Identities=24% Similarity=0.316 Sum_probs=123.9
Q ss_pred eeeeccCCCcccCCCCceEEEeecccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEE
Q 040384 58 FFFDLSEEGNLSNAFGRAVTEGNVHEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYS 137 (224)
Q Consensus 58 f~f~l~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~ 137 (224)
++|.+...... ...||+++.++...+|.++ ++++.++.+.||+..++|||+ +.|++||++|++++++++++|+.+.
T Consensus 48 ~~~~~~~~~~~-~~~~G~~~~~~~~~lp~~~--~~~~~~~~l~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~g~~~~ 123 (385)
T 1j58_A 48 MKFSFSDTHNR-LEKGGYAREVTVRELPISE--NLASVNMRLKPGAIRELHWHK-EAEWAYMIYGSARVTIVDEKGRSFI 123 (385)
T ss_dssp CEECGGGSCCE-EETTEEEEEECTTTCTTCS--SCEEEEEEECTTCEEEEEEES-SCEEEEEEEEEEEEEEECTTSCEEE
T ss_pred eEEEcccCCcc-ccCCcEEEEeccccCcccC--ceEEEEEEECCCCCCCCccCC-hheEEEEEeeeEEEEEEeCCCcEEE
Confidence 66754444333 3478889999999999998 789999999999999999997 7999999999999999987787666
Q ss_pred EEECCCCEEEecCCCeeEEEecCCccEEEEEEeeCCCCccee--hhhhhhcCCCCCCHHHHHhhcCCCHHHHHHHHh
Q 040384 138 KVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSFNSQLPGTQF--VHSSLFNTTPPIPNEVLTKTFLVGDEVINAIKA 212 (224)
Q Consensus 138 ~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~~s~~pg~~~--~~~~lf~~~p~~p~evla~af~v~~~~v~~l~~ 212 (224)
+.|++||++++|+|..|++.|.+ +++.++.+|+...+.... ...++|+. +|.++|+++|+++.++++++++
T Consensus 124 ~~l~~GD~~~ip~g~~H~~~n~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~---~p~evla~~~~vs~~~~~~l~~ 196 (385)
T 1j58_A 124 DDVGEGDLWYFPSGLPHSIQALE-EGAEFLLVFDDGSFSENSTFQLTDWLAH---TPKEVIAANFGVTKEEISNLPG 196 (385)
T ss_dssp EEEETTEEEEECTTCCEEEEEEE-EEEEEEEEESCTTCCGGGEEEHHHHHHT---SCHHHHHHHHTCCTGGGTTSCS
T ss_pred EEeCCCCEEEECCCCeEEEEECC-CCEEEEEEECCCCccccchhhhhhhhhc---ccHHHHHHHhCCCHHHHHhccc
Confidence 79999999999999999999997 458888889877665432 22456676 9999999999999999988865
No 33
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=99.81 E-value=1.9e-20 Score=134.64 Aligned_cols=74 Identities=19% Similarity=0.289 Sum_probs=65.1
Q ss_pred ee-ccCCCcccCCCCceEEEeecccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCe
Q 040384 60 FD-LSEEGNLSNAFGRAVTEGNVHEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNV 134 (224)
Q Consensus 60 f~-l~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~ 134 (224)
|+ +++.+.++|..|. ++.+++.++|+|+++|+|++|+++.|||+.+|||||+|+|++||++|++++++|+++|+
T Consensus 4 fnl~~~~p~~~n~~G~-~~~~~~~~~P~Ln~lgls~~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~V~~~g~ 78 (79)
T 1dgw_X 4 FNLRSRDPIYSNNYGK-LYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQQ 78 (79)
T ss_dssp EETTSSCCSEECSSEE-EEEECTTTCHHHHTTTEEEEEEEECTTCEEEEEEESSCEEEEEEEESCEEEEEEEEC--
T ss_pred cccccCCCCccCCCCc-EEEEChhhCcccCcCCcceEEEEEcCCcCcCCccCCCCcEEEEEEeceEEEEEecCCCC
Confidence 53 4556677666665 69999999999999999999999999999999999999999999999999999998764
No 34
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.49 E-value=1.6e-13 Score=104.45 Aligned_cols=84 Identities=20% Similarity=0.245 Sum_probs=72.1
Q ss_pred cEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEEe
Q 040384 91 GISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSF 170 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~ 170 (224)
++.+.++.+.||+..++|||+...|++||++|++++.+ .+++ ...|++||++++|+|..|++.|.+++++.+++++
T Consensus 38 ~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~--~~~~--~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~v~ 113 (125)
T 3h8u_A 38 DSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQ--GNGI--VTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVSVV 113 (125)
T ss_dssp SCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEEC--STTC--EEEEETTEEEEECTTCCCEEEECSSSCEEEEEEE
T ss_pred CEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEE--CCCe--EEEeCCCCEEEECCCCEEEeEeCCCCCEEEEEEE
Confidence 57889999999999999999877899999999999864 1344 6899999999999999999999999999999888
Q ss_pred eCCCCcce
Q 040384 171 NSQLPGTQ 178 (224)
Q Consensus 171 ~s~~pg~~ 178 (224)
....+++.
T Consensus 114 ~p~~~~~~ 121 (125)
T 3h8u_A 114 APGNAGFA 121 (125)
T ss_dssp ESTTCCCC
T ss_pred CCCcccch
Confidence 76655543
No 35
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=99.47 E-value=1.5e-13 Score=117.68 Aligned_cols=83 Identities=18% Similarity=0.162 Sum_probs=70.9
Q ss_pred ccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEE--------EeC-------CCeEEEEEECCCCEEEecCCC
Q 040384 88 NTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGI--------ITT-------DNVFYSKVVTAGMLFLIPRGL 152 (224)
Q Consensus 88 ~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~--------v~~-------~~~~~~~~l~~GDv~vvP~G~ 152 (224)
.+.++++.++.++||+..++|||++..|++||++|++++.+ -+. +++.+...+++||++++|+|.
T Consensus 39 ~~~~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~ 118 (239)
T 2xlg_A 39 KDIGFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHY 118 (239)
T ss_dssp TTEEEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTE
T ss_pred CCCCEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEEECCCC
Confidence 34478999999999999999999989999999999999876 221 124557899999999999999
Q ss_pred eeEEEecCCccEEE-EEEe
Q 040384 153 VHFQLNVGKENVLF-FPSF 170 (224)
Q Consensus 153 ~H~~~N~G~~~a~~-~~~~ 170 (224)
.|.+.|.+++++.+ +..+
T Consensus 119 ~H~~~N~~~~~~~~~l~~~ 137 (239)
T 2xlg_A 119 MHGFVNPTDKTLPIVFVWM 137 (239)
T ss_dssp EEEEECCSSSCEEEEEEEE
T ss_pred CEEEEeCCCCCEEEEEEEE
Confidence 99999999999888 6666
No 36
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=99.45 E-value=8.4e-13 Score=105.23 Aligned_cols=81 Identities=17% Similarity=0.183 Sum_probs=71.2
Q ss_pred cEEEEEEEEeCCc-ccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCC-CeeEEEecCCccEEEEE
Q 040384 91 GISTNRVDLAVGG-INPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRG-LVHFQLNVGKENVLFFP 168 (224)
Q Consensus 91 gis~~rv~l~pgg-~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G-~~H~~~N~G~~~a~~~~ 168 (224)
++.+.++.++||+ ..++|||+...|++||++|++++.+ +++ ...+++||++++|+| ..|++.|.|++++.++.
T Consensus 45 ~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~---~~~--~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~l~ 119 (162)
T 3l2h_A 45 HMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTM---END--QYPIAPGDFVGFPCHAAAHSISNDGTETLVCLV 119 (162)
T ss_dssp SEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEE---TTE--EEEECTTCEEEECTTSCCEEEECCSSSCEEEEE
T ss_pred eEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEE---CCE--EEEeCCCCEEEECCCCceEEeEeCCCCCEEEEE
Confidence 6889999999999 5899999888999999999999886 455 689999999999997 99999999999999888
Q ss_pred EeeCCCCc
Q 040384 169 SFNSQLPG 176 (224)
Q Consensus 169 ~~~s~~pg 176 (224)
+.....+.
T Consensus 120 v~~p~~~~ 127 (162)
T 3l2h_A 120 IGQRLDQD 127 (162)
T ss_dssp EEECCSEE
T ss_pred EECCCCCC
Confidence 77655433
No 37
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=99.44 E-value=2e-12 Score=103.28 Aligned_cols=114 Identities=15% Similarity=0.111 Sum_probs=82.7
Q ss_pred cEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCC----CeEEEEEECCCCEEEecCCCeeEEEecC-CccEE
Q 040384 91 GISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTD----NVFYSKVVTAGMLFLIPRGLVHFQLNVG-KENVL 165 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~----~~~~~~~l~~GDv~vvP~G~~H~~~N~G-~~~a~ 165 (224)
++.+.++.+.||+..++|+|+ ..|++||++|++++.+.+.+ ++.....+++||++++|+|..|++.|.+ ++++.
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~ 118 (163)
T 1lr5_A 40 EVEVWLQTISPGQRTPIHRHS-CEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQ 118 (163)
T ss_dssp SEEEEEEEECTTCBCCEEEES-SCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEE
T ss_pred cEEEEEEEECCCCcCCCeECC-CCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEE
Confidence 688899999999999999995 68999999999999874321 1224789999999999999999999999 88999
Q ss_pred EEEEeeCCCCcceehhhhhhcCCCCCCHHHHHhhcCCCHHHHHH
Q 040384 166 FFPSFNSQLPGTQFVHSSLFNTTPPIPNEVLTKTFLVGDEVINA 209 (224)
Q Consensus 166 ~~~~~~s~~pg~~~~~~~lf~~~p~~p~evla~af~v~~~~v~~ 209 (224)
++.++...........+++ .. +....+...+.++.+.+++
T Consensus 119 ~l~i~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~ 158 (163)
T 1lr5_A 119 VLVIISRPPAKIFLYDDWS-MP---HTAAVLKFPFVWDEDCFEA 158 (163)
T ss_dssp EEEEEESSSCCEEEESSTT-SC---GGGCEEESSCTTTHHHHHH
T ss_pred EEEEECCCCcccccccccc-cC---CcCccceeccccccccccc
Confidence 8888765433333322222 21 3333344445566665554
No 38
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.43 E-value=1.4e-12 Score=94.83 Aligned_cols=79 Identities=19% Similarity=0.259 Sum_probs=69.4
Q ss_pred ccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEE
Q 040384 88 NTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFF 167 (224)
Q Consensus 88 ~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~ 167 (224)
.+.++.+.++.+.||+..++|+|+...|++||++|++++.+ +++ ...+++||++++|+|..|.+.|.+++++.++
T Consensus 24 ~~~~~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~---~~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~ 98 (105)
T 1v70_A 24 QSERMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRV---GEE--EALLAPGMAAFAPAGAPHGVRNESASPALLL 98 (105)
T ss_dssp EETTEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEE---TTE--EEEECTTCEEEECTTSCEEEECCSSSCEEEE
T ss_pred CCCceEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEE---CCE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 34478899999999999999999777799999999999876 344 6899999999999999999999998888888
Q ss_pred EEee
Q 040384 168 PSFN 171 (224)
Q Consensus 168 ~~~~ 171 (224)
.++.
T Consensus 99 ~v~~ 102 (105)
T 1v70_A 99 VVTA 102 (105)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 7764
No 39
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=99.40 E-value=7.7e-12 Score=103.07 Aligned_cols=100 Identities=17% Similarity=0.225 Sum_probs=80.2
Q ss_pred CceEEEeecccCCCCccccEEEEEEEEeCCcc------cCceecC--CCCceEEEEeCeEEEEEEeCCCeEEEEEECCCC
Q 040384 73 GRAVTEGNVHEFPGVNTQGISTNRVDLAVGGI------NPPHLHP--RSSESSIVIRGTVLVGIITTDNVFYSKVVTAGM 144 (224)
Q Consensus 73 g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~------~~pH~Hp--~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GD 144 (224)
+..+..+...-.|... .++.+..+.++||+. .++|+|+ +..|++||++|++.+.+.+..|+.....+++||
T Consensus 49 ~~~~~~v~~l~~~~~~-~~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD 127 (190)
T 1x82_A 49 DPVVYEVYAVEQEEKE-GDLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTPEGDAKWISMEPGT 127 (190)
T ss_dssp CCEEEEEEEECCCSCT-TCEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECTTCCEEEEEECTTC
T ss_pred CceEEEEEEecCCCCC-CCeEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcCcCCcEEEEEECCCc
Confidence 3445555332233332 367888889999998 8899998 347999999999999987766777789999999
Q ss_pred EEEecCCCeeEEEecCCccEEEEEEeeCC
Q 040384 145 LFLIPRGLVHFQLNVGKENVLFFPSFNSQ 173 (224)
Q Consensus 145 v~vvP~G~~H~~~N~G~~~a~~~~~~~s~ 173 (224)
++++|+|..|+..|.|++++.+++++...
T Consensus 128 ~v~ip~g~~H~~~N~g~~~~~~l~v~~~~ 156 (190)
T 1x82_A 128 VVYVPPYWAHRTVNIGDEPFIFLAIYPAD 156 (190)
T ss_dssp EEEECTTCEEEEEECSSSCEEEEEEEETT
T ss_pred EEEECCCCeEEEEECCcccEEEEEEECCC
Confidence 99999999999999999999988877643
No 40
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=99.39 E-value=1.4e-12 Score=95.55 Aligned_cols=77 Identities=17% Similarity=0.273 Sum_probs=66.4
Q ss_pred ccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEE
Q 040384 90 QGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPS 169 (224)
Q Consensus 90 ~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~ 169 (224)
..+.+.+++++||+..++|+|+...|++||++|++++.+ .++. ....|++||.+++|+|..|+..|.|++++.++.+
T Consensus 16 ~~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~--~~g~-~~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l~v 92 (97)
T 2fqp_A 16 ERVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLET--PEGS-VTSQLTRGVSYTRPEGVEHNVINPSDTEFVFVEI 92 (97)
T ss_dssp SSEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEE--TTEE-EEEEECTTCCEEECTTCEEEEECCSSSCEEEEEE
T ss_pred CeEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEEe--CCCC-EEEEEcCCCEEEeCCCCcccCEeCCCCcEEEEEE
Confidence 368899999999999999999876579999999999886 2221 3689999999999999999999999999887764
No 41
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=99.37 E-value=1.7e-11 Score=98.98 Aligned_cols=116 Identities=18% Similarity=0.179 Sum_probs=84.9
Q ss_pred CCccCCCeee-eccCCC---cccCCCCceEEEeecccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEE
Q 040384 51 TEVTSDDFFF-DLSEEG---NLSNAFGRAVTEGNVHEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLV 126 (224)
Q Consensus 51 ~~vt~~df~f-~l~~~~---~~~~~~g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v 126 (224)
.-+..+++.| .+.... ......|...+....... +....++.+.++.++||+..++|||+ ..|++||++|++++
T Consensus 12 ~iv~~~~~~W~~~~~~~~~~~~~~~~g~~~~~L~~~~~-g~~~~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~~ 89 (167)
T 3ibm_A 12 RVLRERDYRWEGTEEEAYKAEGTHFSGARRQTLVGRPA-GQEAPAFETRYFEVEPGGYTTLERHE-HTHVVMVVRGHAEV 89 (167)
T ss_dssp EEECEETTEETTCCCC---------CCEEEEEEECTTT-TCCSSSEEEEEEEECTTCBCCCBBCS-SCEEEEEEESEEEE
T ss_pred ceeecCCcccccceeeeccCCCCcCCCcEEEEEECCCC-CCCCCcEEEEEEEECCCCCCCCccCC-CcEEEEEEeCEEEE
Confidence 4556677777 433211 001224554444443332 22334788999999999999999995 78999999999998
Q ss_pred EEEeCCCeEEEEEECCCCEEEecCCCeeEEEecC-CccEEEEEEeeCC
Q 040384 127 GIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVG-KENVLFFPSFNSQ 173 (224)
Q Consensus 127 ~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G-~~~a~~~~~~~s~ 173 (224)
.+ +++ .+.+++||++++|+|..|++.|.+ ++++.+++++...
T Consensus 90 ~i---~~~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 132 (167)
T 3ibm_A 90 VL---DDR--VEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSD 132 (167)
T ss_dssp EE---TTE--EEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEESS
T ss_pred EE---CCE--EEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeCC
Confidence 86 455 689999999999999999999999 9999988887644
No 42
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=99.36 E-value=5.9e-12 Score=101.20 Aligned_cols=81 Identities=20% Similarity=0.173 Sum_probs=70.9
Q ss_pred cEEEEEEEEeCCccc-CceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCC--CeeEEEecCCccEEEE
Q 040384 91 GISTNRVDLAVGGIN-PPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRG--LVHFQLNVGKENVLFF 167 (224)
Q Consensus 91 gis~~rv~l~pgg~~-~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G--~~H~~~N~G~~~a~~~ 167 (224)
.+.+.++.+.||+.. ++|||+...|++||++|++++.+ +++ ...|++||++++|+| ..|.+.|.++++++++
T Consensus 42 ~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~---~~~--~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~~~l 116 (163)
T 3i7d_A 42 QFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVD---DQG--EHPMVPGDCAAFPAGDPNGHQFVNRTDAPATFL 116 (163)
T ss_dssp SEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEE---TTE--EEEECTTCEEEECTTCCCCBEEECCSSSCEEEE
T ss_pred eEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEE---CCE--EEEeCCCCEEEECCCCCcceEEEECCCCCEEEE
Confidence 688999999999965 79999876899999999999986 454 689999999999999 9999999999999998
Q ss_pred EEeeCCCCc
Q 040384 168 PSFNSQLPG 176 (224)
Q Consensus 168 ~~~~s~~pg 176 (224)
.+.......
T Consensus 117 ~v~~p~~~d 125 (163)
T 3i7d_A 117 VVGTRTPTE 125 (163)
T ss_dssp EEEECCSCE
T ss_pred EEECCCCCC
Confidence 887655443
No 43
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=99.36 E-value=6.4e-12 Score=92.85 Aligned_cols=79 Identities=19% Similarity=0.230 Sum_probs=69.3
Q ss_pred cccEEEEEEEEeCCcccCce--ecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEE
Q 040384 89 TQGISTNRVDLAVGGINPPH--LHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLF 166 (224)
Q Consensus 89 ~~gis~~rv~l~pgg~~~pH--~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~ 166 (224)
..++.+.++.+.||+..++| +|++..|++||++|++++.+ +++ ...+++||++++|+|..|.+.|.+++++.+
T Consensus 18 ~~~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~---~~~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~ 92 (113)
T 2gu9_A 18 LRQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIV---DGH--TQALQAGSLIAIERGQAHEIRNTGDTPLKT 92 (113)
T ss_dssp ETTEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEE---TTE--EEEECTTEEEEECTTCCEEEECCSSSCEEE
T ss_pred CCcEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEE---CCE--EEEeCCCCEEEECCCCcEEeEcCCCCCEEE
Confidence 34688999999999999888 99767899999999999886 454 689999999999999999999999989888
Q ss_pred EEEeeC
Q 040384 167 FPSFNS 172 (224)
Q Consensus 167 ~~~~~s 172 (224)
+.++..
T Consensus 93 ~~v~~~ 98 (113)
T 2gu9_A 93 VNFYHP 98 (113)
T ss_dssp EEEEES
T ss_pred EEEECC
Confidence 877654
No 44
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=99.34 E-value=5.5e-12 Score=99.34 Aligned_cols=84 Identities=19% Similarity=0.266 Sum_probs=70.3
Q ss_pred ccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCe-EEEEEECCCCEEEecCCCeeEEEecCCccEEEEE
Q 040384 90 QGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNV-FYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFP 168 (224)
Q Consensus 90 ~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~-~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~ 168 (224)
.++.+.++.+.||+..++|||+...|++||++|++++.+-+.... .+...|++||++++|+|..|++.|.+++++.++.
T Consensus 41 ~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~ 120 (148)
T 2oa2_A 41 DHLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYS 120 (148)
T ss_dssp SSCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEEE
T ss_pred CceEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCccccceeeEEECCCCEEEECCCCcEEEEECCCCCEEEEE
Confidence 357888999999999999999877799999999999987543211 1348999999999999999999999999998887
Q ss_pred EeeCC
Q 040384 169 SFNSQ 173 (224)
Q Consensus 169 ~~~s~ 173 (224)
++...
T Consensus 121 i~~~~ 125 (148)
T 2oa2_A 121 IYAPP 125 (148)
T ss_dssp EEESC
T ss_pred EECCC
Confidence 76543
No 45
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=99.34 E-value=9.8e-13 Score=97.50 Aligned_cols=79 Identities=14% Similarity=0.150 Sum_probs=68.1
Q ss_pred cccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEE
Q 040384 89 TQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFP 168 (224)
Q Consensus 89 ~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~ 168 (224)
.-.+.+.|++++||+..++|+|+...|++||++|++++.. .+++.....+++||.+++|.|..|...|.|++++.++.
T Consensus 14 n~~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~--~d~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~Ie 91 (98)
T 3lag_A 14 NDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVA--PDGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLE 91 (98)
T ss_dssp SSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEEC--TTSCEECCCBCTTCCEEECTTCEEEEBCCSSSCEEEEE
T ss_pred CCeEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEe--CCCceEEEEecCCcEEEEcCCCcEECEECCCCeEEEEE
Confidence 3468999999999999999999988889999999998764 34544456799999999999999999999999999887
Q ss_pred E
Q 040384 169 S 169 (224)
Q Consensus 169 ~ 169 (224)
+
T Consensus 92 V 92 (98)
T 3lag_A 92 I 92 (98)
T ss_dssp E
T ss_pred E
Confidence 5
No 46
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=99.33 E-value=1.3e-11 Score=95.45 Aligned_cols=84 Identities=19% Similarity=0.295 Sum_probs=71.3
Q ss_pred ccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEE
Q 040384 90 QGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPS 169 (224)
Q Consensus 90 ~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~ 169 (224)
.++++.++.++||+..++|||+ ..|++||++|++++.+.. +++ ...+++||++++|+|..|.+.|.+++++.++.+
T Consensus 37 ~~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~~~-~~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~i 112 (145)
T 3ht1_A 37 DRFVLTEFEVSPNGSTPPHFHE-WEHEIYVLEGSMGLVLPD-QGR--TEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVV 112 (145)
T ss_dssp CSEEEEEEEEEEEEECCCEECS-SCEEEEEEEECEEEEEGG-GTE--EEEECTTCEEEECTTCCBEEECCTTCCEEEEEE
T ss_pred CcEEEEEEEECCCCcCCCccCC-CceEEEEEEeEEEEEEeE-CCE--EEEECCCCEEEECCCCeEEeEcCCCCCEEEEEE
Confidence 3688999999999999999996 578899999999987211 344 689999999999999999999999999998888
Q ss_pred eeCCCCcc
Q 040384 170 FNSQLPGT 177 (224)
Q Consensus 170 ~~s~~pg~ 177 (224)
+....+..
T Consensus 113 ~~~~~~~~ 120 (145)
T 3ht1_A 113 APCERPPV 120 (145)
T ss_dssp EESCCCCC
T ss_pred ECCCCCCe
Confidence 87665554
No 47
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=99.31 E-value=7.5e-12 Score=95.07 Aligned_cols=78 Identities=23% Similarity=0.441 Sum_probs=68.1
Q ss_pred cccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEE
Q 040384 89 TQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFP 168 (224)
Q Consensus 89 ~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~ 168 (224)
+.++.+.++.+.||+..++|+|+. .|++||++|++++.+ +++ ...+++||++++|+|..|.+.|.++ ++.++.
T Consensus 38 ~~~~~~~~~~~~pg~~~~~H~H~~-~e~~~vl~G~~~~~~---~~~--~~~l~~Gd~~~ip~~~~H~~~~~~~-~~~~l~ 110 (126)
T 4e2g_A 38 GKNLMLNWVRIEPNTEMPAHEHPH-EQAGVMLEGTLELTI---GEE--TRVLRPGMAYTIPGGVRHRARTFED-GCLVLD 110 (126)
T ss_dssp CSSCEEEEEEECTTCEEEEECCSS-EEEEEEEEECEEEEE---TTE--EEEECTTEEEEECTTCCEEEECCTT-CEEEEE
T ss_pred CCCeEEEEEEECCCCcCCCccCCC-ceEEEEEEeEEEEEE---CCE--EEEeCCCCEEEECCCCcEEeEECCC-CEEEEE
Confidence 336899999999999999999975 899999999999986 454 6899999999999999999999987 788887
Q ss_pred EeeCC
Q 040384 169 SFNSQ 173 (224)
Q Consensus 169 ~~~s~ 173 (224)
++...
T Consensus 111 v~~p~ 115 (126)
T 4e2g_A 111 IFSPP 115 (126)
T ss_dssp EEESC
T ss_pred EECCC
Confidence 77643
No 48
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.30 E-value=1.5e-11 Score=92.98 Aligned_cols=77 Identities=17% Similarity=0.256 Sum_probs=65.3
Q ss_pred ccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEE
Q 040384 88 NTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFF 167 (224)
Q Consensus 88 ~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~ 167 (224)
++.++.+.++.++||+..++|||+. .|++||++|++++.+ +++ .+.|++||.+++|+|..|.+.|.++....++
T Consensus 32 ~~~~~~v~~~~l~~G~~~~~H~H~~-~e~~~Vl~G~~~~~i---~~~--~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~ 105 (114)
T 3fjs_A 32 KEHRLEVMRMVLPAGKQVGSHSVAG-PSTIQCLEGEVEIGV---DGA--QRRLHQGDLLYLGAGAAHDVNAITNTSLLVT 105 (114)
T ss_dssp EETTEEEEEEEECTTCEEEEECCSS-CEEEEEEESCEEEEE---TTE--EEEECTTEEEEECTTCCEEEEESSSEEEEEE
T ss_pred eCCCEEEEEEEECCCCccCceeCCC-cEEEEEEECEEEEEE---CCE--EEEECCCCEEEECCCCcEEEEeCCCcEEEEE
Confidence 3447899999999999999999975 799999999999986 455 6899999999999999999999876555544
Q ss_pred EEe
Q 040384 168 PSF 170 (224)
Q Consensus 168 ~~~ 170 (224)
.++
T Consensus 106 ~v~ 108 (114)
T 3fjs_A 106 VVL 108 (114)
T ss_dssp EEC
T ss_pred EEe
Confidence 433
No 49
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.30 E-value=1.5e-11 Score=95.30 Aligned_cols=77 Identities=18% Similarity=0.192 Sum_probs=67.5
Q ss_pred cccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEE
Q 040384 89 TQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFP 168 (224)
Q Consensus 89 ~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~ 168 (224)
+..+.+.++.++||+..++|+|++..|++||++|++++.+ +++ ...|++||++++|+|..|++.|.+++++.++.
T Consensus 54 ~~~~~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i---~~~--~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l~ 128 (133)
T 1o4t_A 54 NKARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHD---NGK--DVPIKAGDVCFTDSGESHSIENTGNTDLEFLA 128 (133)
T ss_dssp TSEEEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEE---TTE--EEEEETTEEEEECTTCEEEEECCSSSCEEEEE
T ss_pred CceEEEEEEEECCCCccCceECCCccEEEEEEeCEEEEEE---CCE--EEEeCCCcEEEECCCCcEEeEECCCCCEEEEE
Confidence 4457888999999999999999766899999999999876 454 68999999999999999999999999988776
Q ss_pred Ee
Q 040384 169 SF 170 (224)
Q Consensus 169 ~~ 170 (224)
+.
T Consensus 129 v~ 130 (133)
T 1o4t_A 129 VI 130 (133)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 50
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=99.28 E-value=1.1e-11 Score=101.20 Aligned_cols=80 Identities=21% Similarity=0.261 Sum_probs=70.7
Q ss_pred ccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEE
Q 040384 90 QGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPS 169 (224)
Q Consensus 90 ~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~ 169 (224)
.|..+.+++++||+..++|.|. ..|++||++|++++.+- +++ .+.|++||.+ +|+|..|.+.|.|+++++++.+
T Consensus 77 ~G~~~~~v~l~PG~~~~~H~H~-~eE~~~VLeGel~l~ld--~ge--~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~V 150 (172)
T 3es1_A 77 GGSVIRVVDMLPGKESPMHRTN-SIDYGIVLEGEIELELD--DGA--KRTVRQGGII-VQRGTNHLWRNTTDKPCRIAFI 150 (172)
T ss_dssp CSEEEEEEEECTTCBCCCBCCS-EEEEEEEEESCEEEECG--GGC--EEEECTTCEE-EECSCCBEEECCSSSCEEEEEE
T ss_pred CCeEEEEEEECCCCCCCCeecC-ceEEEEEEeCEEEEEEC--CCe--EEEECCCCEE-EeCCCcEEEEeCCCCCEEEEEE
Confidence 4889999999999999999994 57999999999999862 134 5899999999 9999999999999999999998
Q ss_pred eeCCCC
Q 040384 170 FNSQLP 175 (224)
Q Consensus 170 ~~s~~p 175 (224)
+....|
T Consensus 151 ~~P~~p 156 (172)
T 3es1_A 151 LIEAPA 156 (172)
T ss_dssp EEECCC
T ss_pred EcCCCc
Confidence 876666
No 51
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=99.28 E-value=2.4e-11 Score=97.33 Aligned_cols=78 Identities=17% Similarity=0.147 Sum_probs=69.9
Q ss_pred ccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEE
Q 040384 90 QGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPS 169 (224)
Q Consensus 90 ~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~ 169 (224)
.++.+.+..++||+..++|||+ ..|++||++|++++.+ +++ ...+++||++++|+|..|.+.|.+++++.++++
T Consensus 42 ~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~v~v---~g~--~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i 115 (156)
T 3kgz_A 42 LACEWRYFEVDEGGYSTLERHA-HVHAVMIHRGHGQCLV---GET--ISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCV 115 (156)
T ss_dssp CSEEEEEEEEEEEEECCCBBCS-SCEEEEEEEEEEEEEE---TTE--EEEEETTCEEEECTTCCEEEECCSSSCEEEEEE
T ss_pred CcEEEEEEEECCCCccCceeCC-CcEEEEEEeCEEEEEE---CCE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 4788999999999999999996 5799999999999986 455 689999999999999999999999999999888
Q ss_pred eeCC
Q 040384 170 FNSQ 173 (224)
Q Consensus 170 ~~s~ 173 (224)
++..
T Consensus 116 ~~~~ 119 (156)
T 3kgz_A 116 VNAA 119 (156)
T ss_dssp EESS
T ss_pred EeCC
Confidence 7644
No 52
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=99.27 E-value=2.8e-11 Score=97.93 Aligned_cols=78 Identities=15% Similarity=0.138 Sum_probs=69.6
Q ss_pred ccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEE
Q 040384 90 QGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPS 169 (224)
Q Consensus 90 ~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~ 169 (224)
.++.+.++.+.||+..++|||+. .|++||++|++++.+ +++ ...+++||++++|+|..|.+.|.+++++.++++
T Consensus 51 ~~~~~~~~~l~pG~~~~~H~H~~-~E~~~Vl~G~~~~~v---~g~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i 124 (166)
T 3jzv_A 51 LTGELRYFEVGPGGHSTLERHQH-AHGVMILKGRGHAMV---GRA--VSAVAPYDLVTIPGWSWHQFRAPADEALGFLCM 124 (166)
T ss_dssp CSEEEEEEEEEEEEECCCBBCSS-CEEEEEEEECEEEEE---TTE--EEEECTTCEEEECTTCCEEEECCTTSCEEEEEE
T ss_pred CeEEEEEEEECCCCccCceeCCC-cEEEEEEeCEEEEEE---CCE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 47888999999999999999964 799999999999876 455 689999999999999999999999999998888
Q ss_pred eeCC
Q 040384 170 FNSQ 173 (224)
Q Consensus 170 ~~s~ 173 (224)
+...
T Consensus 125 ~~~~ 128 (166)
T 3jzv_A 125 VNAE 128 (166)
T ss_dssp EESS
T ss_pred EccC
Confidence 7643
No 53
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=99.26 E-value=2.9e-11 Score=90.89 Aligned_cols=73 Identities=19% Similarity=0.329 Sum_probs=64.1
Q ss_pred cEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEE-EECCCCEEEecCCCeeEEEecCCccEEEEEE
Q 040384 91 GISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSK-VVTAGMLFLIPRGLVHFQLNVGKENVLFFPS 169 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~-~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~ 169 (224)
++.+.++.+.||+..++|||+ ..|++||++|++++.+ +++ .. .+++||++++|+|..|...|.+++++.++.+
T Consensus 26 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~i---~~~--~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i 99 (117)
T 2b8m_A 26 HVQINHIVLPRGEQMPKHYSN-SYVHLIIIKGEMTLTL---EDQ--EPHNYKEGNIVYVPFNVKMLIQNINSDILEFFVV 99 (117)
T ss_dssp SCEEEEEEEETTCBCCCEECS-SCEEEEEEESEEEEEE---TTS--CCEEEETTCEEEECTTCEEEEECCSSSEEEEEEE
T ss_pred ceEEEEEEECCCCcCCCEeCC-CcEEEEEEeCEEEEEE---CCE--EEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEE
Confidence 567888999999999999994 6899999999999886 343 36 9999999999999999999999888887766
No 54
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=99.26 E-value=4.6e-11 Score=87.95 Aligned_cols=80 Identities=14% Similarity=0.185 Sum_probs=68.5
Q ss_pred eEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEEee-CCCCcceehhh---hhhcCCCCCCHHHHHhhcCCCHHHHHH
Q 040384 134 VFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSFN-SQLPGTQFVHS---SLFNTTPPIPNEVLTKTFLVGDEVINA 209 (224)
Q Consensus 134 ~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~~-s~~pg~~~~~~---~lf~~~p~~p~evla~af~v~~~~v~~ 209 (224)
+.+...|++||+++||+|++....+.. ++.++++-. .+++..+.+++ +++++ +|.|+++.+|+++.+++++
T Consensus 4 ~~~~~~l~~G~v~vVPq~~~v~~~A~~--~le~v~F~tna~~~~~~~LAG~~~Svl~~---l~~evla~aF~~s~ee~~~ 78 (93)
T 1dgw_Y 4 RRYAATLSEGDIIVIPSSFPVALKAAS--DLNMVGIGVNAENNERNFLAGHKENVIRQ---IPRQVSDLTFPGSGEEVEE 78 (93)
T ss_dssp EEEEEEECTTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSTTBSTTT---SCHHHHHHHSSSCTHHHHH
T ss_pred chhhceecCCcEEEECCCCceeEEecC--CeEEEEEEecCCCCeeeeccCCcccHHHh---CCHHHHHHHcCCCHHHHHH
Confidence 345789999999999999999998764 488888744 44888888864 89997 9999999999999999999
Q ss_pred HHhccCCCc
Q 040384 210 IKAAITSAQ 218 (224)
Q Consensus 210 l~~~~~~~~ 218 (224)
|+..+.+..
T Consensus 79 l~~~q~e~~ 87 (93)
T 1dgw_Y 79 LLENQKESY 87 (93)
T ss_dssp HTTSCCCCS
T ss_pred HHhcCCCce
Confidence 999987764
No 55
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=99.26 E-value=4.8e-11 Score=89.18 Aligned_cols=75 Identities=25% Similarity=0.354 Sum_probs=65.2
Q ss_pred cEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEEe
Q 040384 91 GISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSF 170 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~ 170 (224)
++.+.++.+.||+..++|+|+ ..|++||++|++++.+ +++ ...+++||++++|+|..|.+.|.+ ++.++.++
T Consensus 33 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~---~~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l~v~ 104 (116)
T 2pfw_A 33 ELMAVKIWFDKGAEGYVHAHR-HSQVSYVVEGEFHVNV---DGV--IKVLTAGDSFFVPPHVDHGAVCPT--GGILIDTF 104 (116)
T ss_dssp TEEEEEEEECTTEEEEEECCS-SEEEEEEEEECEEEEE---TTE--EEEECTTCEEEECTTCCEEEEESS--CEEEEEEE
T ss_pred ceEEEEEEECCCCcCCcEECC-cceEEEEEeeEEEEEE---CCE--EEEeCCCCEEEECcCCceeeEeCC--CcEEEEEE
Confidence 588999999999999999996 6899999999999886 455 689999999999999999999987 56777776
Q ss_pred eCC
Q 040384 171 NSQ 173 (224)
Q Consensus 171 ~s~ 173 (224)
...
T Consensus 105 ~p~ 107 (116)
T 2pfw_A 105 SPA 107 (116)
T ss_dssp ESC
T ss_pred CCc
Confidence 544
No 56
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=99.25 E-value=6.1e-11 Score=96.98 Aligned_cols=82 Identities=11% Similarity=0.097 Sum_probs=68.0
Q ss_pred CccccEEEEEEEEeCCcccC---ceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEec-CCc
Q 040384 87 VNTQGISTNRVDLAVGGINP---PHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNV-GKE 162 (224)
Q Consensus 87 l~~~gis~~rv~l~pgg~~~---pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~-G~~ 162 (224)
..+..+.+.++.+.||+..+ +|+|+. .|++||++|++++.+-+ ++....+.|++||.+++|++..|.+.|. +++
T Consensus 112 ~~~~~~~~~~~~~~pg~~~~~~~~h~h~~-~E~~~Vl~G~~~~~~~~-~~~~~~~~l~~GD~~~~~~~~~H~~~n~~~~~ 189 (198)
T 2bnm_A 112 KRAPSLVPLVVDVLTDNPDDAKFNSGHAG-NEFLFVLEGEIHMKWGD-KENPKEALLPTGASMFVEEHVPHAFTAAKGTG 189 (198)
T ss_dssp TTSTTCEEEEEEECCCCGGGCCCCCCCSS-CEEEEEEESCEEEEESC-TTSCEEEEECTTCEEEECTTCCEEEEESTTSC
T ss_pred CCCCcceEEEEEEcCCCCCcccccccCCC-eEEEEEEeeeEEEEECC-cCCcccEEECCCCEEEeCCCCceEEEecCCCC
Confidence 44457889999999999877 699965 89999999999998722 1122368999999999999999999999 999
Q ss_pred cEEEEEEe
Q 040384 163 NVLFFPSF 170 (224)
Q Consensus 163 ~a~~~~~~ 170 (224)
++.++.++
T Consensus 190 ~~~~l~v~ 197 (198)
T 2bnm_A 190 SAKLIAVN 197 (198)
T ss_dssp CEEEEEEE
T ss_pred CeEEEEEe
Confidence 99887764
No 57
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=99.24 E-value=5.8e-11 Score=91.26 Aligned_cols=78 Identities=18% Similarity=0.141 Sum_probs=59.3
Q ss_pred cEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCC-eEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEE
Q 040384 91 GISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDN-VFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPS 169 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~-~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~ 169 (224)
.+.+.++.++||+..++|+|+...|++||++|++++.+ ++ + ...+++||++++|+|..|.+.|.+++ ..++.+
T Consensus 42 ~~~~~~~~~~~g~~~~~H~H~~~~E~~~vl~G~~~~~~---~~~~--~~~l~~Gd~~~ip~g~~H~~~~~~~~-~~~l~~ 115 (134)
T 2o8q_A 42 GAHVIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEY---EDIG--AVMLEAGGSAFQPPGVRHRELRHSDD-LEVLEI 115 (134)
T ss_dssp EEEEEEECC-----CCCEEECCSCEEEEEEESEEEEEE---TTTE--EEEEETTCEEECCTTCCEEEEEECTT-CEEEEE
T ss_pred EEEEEEEecCCCCCCCCEECCCCcEEEEEEeCEEEEEE---CCcE--EEEecCCCEEEECCCCcEEeEeCCCC-eEEEEE
Confidence 34566777778999999999776899999999999886 34 4 68999999999999999999998774 566666
Q ss_pred eeCCC
Q 040384 170 FNSQL 174 (224)
Q Consensus 170 ~~s~~ 174 (224)
+....
T Consensus 116 ~~p~~ 120 (134)
T 2o8q_A 116 VSPAG 120 (134)
T ss_dssp ESSTT
T ss_pred ECCCc
Confidence 65443
No 58
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=99.24 E-value=5.9e-11 Score=90.30 Aligned_cols=75 Identities=24% Similarity=0.312 Sum_probs=66.0
Q ss_pred ccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEE
Q 040384 90 QGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPS 169 (224)
Q Consensus 90 ~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~ 169 (224)
..+.+.+..+.||...++||| +..|++||++|++++.+ +++ ...+++||++++|+|..|.+.|.+++++.++++
T Consensus 32 ~~~~~~~~~~~pg~~~~~H~H-~~~Ei~~v~~G~~~~~i---~~~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i 105 (128)
T 4i4a_A 32 TPFGGAWCIVRPETKSFRHSH-NEYELFIVIQGNAIIRI---NDE--DFPVTKGDLIIIPLDSEHHVINNNQEDFHFYTI 105 (128)
T ss_dssp CSSEEEEEEECTTEECCCBCC-SSEEEEEEEESEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred CCcEEEEEEECCCCccCCEec-CCeEEEEEEeCEEEEEE---CCE--EEEECCCcEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 357888999999999999999 57899999999999887 455 689999999999999999999999888877654
Q ss_pred e
Q 040384 170 F 170 (224)
Q Consensus 170 ~ 170 (224)
.
T Consensus 106 ~ 106 (128)
T 4i4a_A 106 W 106 (128)
T ss_dssp E
T ss_pred E
Confidence 3
No 59
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=99.23 E-value=1.1e-11 Score=91.90 Aligned_cols=77 Identities=14% Similarity=0.154 Sum_probs=63.6
Q ss_pred cEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEE
Q 040384 91 GISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPS 169 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~ 169 (224)
.+.+.+++|+||+....|+|+...+++|+++|++++. ..+|+.....+++||++++|+|..|+..|.|+++++++.+
T Consensus 16 ~v~v~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~--~~dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~v 92 (98)
T 2ozi_A 16 EVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIV--APDGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEI 92 (98)
T ss_dssp SEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEE--CTTSCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEEEE
T ss_pred cEEEEEEEECCCCccCcEeCCCCEEEEEEeeEEEEEE--eCCCcEEEEEECCCCEEEECCCCceeCEECCCCCEEEEEE
Confidence 6889999999999999999976555556678887765 3456533568999999999999999999999999998875
No 60
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=99.23 E-value=3.5e-11 Score=92.12 Aligned_cols=77 Identities=18% Similarity=0.251 Sum_probs=67.7
Q ss_pred cccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEE
Q 040384 89 TQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFP 168 (224)
Q Consensus 89 ~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~ 168 (224)
..++.+.++.++||+..++|+|+ ..|++||++|++++.+ +++ ...+++||++++|+|..|.+.|.+++++.++.
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~i---~~~--~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l~ 118 (126)
T 1vj2_A 45 APNFVMRLFTVEPGGLIDRHSHP-WEHEIFVLKGKLTVLK---EQG--EETVEEGFYIFVEPNEIHGFRNDTDSEVEFLC 118 (126)
T ss_dssp CSSEEEEEEEEEEEEEEEEECCS-SCEEEEEEESEEEEEC---SSC--EEEEETTEEEEECTTCCEEEECCSSSCEEEEE
T ss_pred CCCEEEEEEEECCCCcCCceeCC-CcEEEEEEEeEEEEEE---CCE--EEEECCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 44789999999999999999996 6899999999999876 344 58999999999999999999999988888876
Q ss_pred Eee
Q 040384 169 SFN 171 (224)
Q Consensus 169 ~~~ 171 (224)
++.
T Consensus 119 v~~ 121 (126)
T 1vj2_A 119 LIP 121 (126)
T ss_dssp EEE
T ss_pred EEc
Confidence 653
No 61
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=99.23 E-value=2.8e-11 Score=92.11 Aligned_cols=78 Identities=18% Similarity=0.139 Sum_probs=64.8
Q ss_pred cccEEEEEEEEeCCcccC-ceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEE
Q 040384 89 TQGISTNRVDLAVGGINP-PHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFF 167 (224)
Q Consensus 89 ~~gis~~rv~l~pgg~~~-pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~ 167 (224)
..++.+.+..+.||+..+ +|||+...+++||++|++++.+ +++ ...+++||++++|+|..|.+.|.+++++.++
T Consensus 23 ~~~~~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i---~~~--~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~~ 97 (125)
T 3cew_A 23 LTGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITI---DGE--KIELQAGDWLRIAPDGKRQISAASDSPIGFL 97 (125)
T ss_dssp CSSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEE---TTE--EEEEETTEEEEECTTCCEEEEEBTTBCEEEE
T ss_pred CCCcEEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEE---CCE--EEEeCCCCEEEECCCCcEEEEcCCCCCEEEE
Confidence 446788889999999988 8999654345559999999886 455 6899999999999999999999998888877
Q ss_pred EEee
Q 040384 168 PSFN 171 (224)
Q Consensus 168 ~~~~ 171 (224)
.+.-
T Consensus 98 ~i~~ 101 (125)
T 3cew_A 98 CIQV 101 (125)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 6654
No 62
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.22 E-value=9.8e-11 Score=92.34 Aligned_cols=77 Identities=19% Similarity=0.244 Sum_probs=68.1
Q ss_pred ccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEE-EEECCCCEEEecCCCeeEEEecCCccEEEEE
Q 040384 90 QGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYS-KVVTAGMLFLIPRGLVHFQLNVGKENVLFFP 168 (224)
Q Consensus 90 ~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~-~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~ 168 (224)
.++.+.++.++||+..++|+|+. .|++||++|++++.+ +++ . ..+++||++++|+|..|+..|.+++++.+++
T Consensus 46 ~~~~~~~~~~~pg~~~~~H~H~~-~E~~~Vl~G~~~~~~---~~~--~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~ 119 (147)
T 2f4p_A 46 FNTQVYDVVFEPGARTHWHSHPG-GQILIVTRGKGFYQE---RGK--PARILKKGDVVEIPPNVVHWHGAAPDEELVHIG 119 (147)
T ss_dssp SSCEEEEEEECTTCEECSEECTT-CEEEEEEEEEEEEEE---TTS--CCEEEETTCEEEECTTCCEEEEEBTTBCEEEEE
T ss_pred CcEEEEEEEECCCCccCceECCC-ceEEEEEeCEEEEEE---CCE--EEEEECCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 47899999999999999999976 899999999999886 344 4 7999999999999999999999999998887
Q ss_pred EeeC
Q 040384 169 SFNS 172 (224)
Q Consensus 169 ~~~s 172 (224)
++..
T Consensus 120 v~~~ 123 (147)
T 2f4p_A 120 ISTQ 123 (147)
T ss_dssp EECC
T ss_pred EEcc
Confidence 7653
No 63
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.19 E-value=7.2e-11 Score=101.33 Aligned_cols=78 Identities=14% Similarity=0.139 Sum_probs=66.6
Q ss_pred cccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCC-ccEEEE
Q 040384 89 TQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGK-ENVLFF 167 (224)
Q Consensus 89 ~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~-~~a~~~ 167 (224)
...+.+.++.++||+..+.|||+...|++||++|++++.+ +++ ...|++||++++|+|..|++.|.|+ +++.++
T Consensus 176 ~~~~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i---~~~--~~~l~~GD~i~~~~~~~H~~~n~g~~~~~~~l 250 (261)
T 1rc6_A 176 GFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNL---DNN--WIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYI 250 (261)
T ss_dssp TCSEEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEES---SSC--EEEEETTCEEEECSSEEEEEEEC----CEEEE
T ss_pred CCceEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEE---CCE--EEEeCCCCEEEECCCCcEEeEeCCCCcCEEEE
Confidence 4468899999999999999999878899999999999886 344 6899999999999999999999999 998888
Q ss_pred EEee
Q 040384 168 PSFN 171 (224)
Q Consensus 168 ~~~~ 171 (224)
.+.+
T Consensus 251 ~~~d 254 (261)
T 1rc6_A 251 YSKD 254 (261)
T ss_dssp EEEE
T ss_pred EEec
Confidence 7655
No 64
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=99.17 E-value=2.2e-10 Score=85.35 Aligned_cols=74 Identities=19% Similarity=0.269 Sum_probs=62.5
Q ss_pred cccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEE
Q 040384 89 TQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFP 168 (224)
Q Consensus 89 ~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~ 168 (224)
+.++.+.++.+.||+..++|+|+ ..|++||++|++++.+ +++ ...+++||++++|+|..|.+.|.++ +.++.
T Consensus 37 ~~~~~~~~~~~~~g~~~~~H~H~-~~e~~~vl~G~~~~~~---~~~--~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~~~ 108 (115)
T 1yhf_A 37 RQDLGITVFSLDKGQEIGRHSSP-GDAMVTILSGLAEITI---DQE--TYRVAEGQTIVMPAGIPHALYAVEA--FQMLL 108 (115)
T ss_dssp ETTEEEEEEEECTTCEEEEECCS-SEEEEEEEESEEEEEE---TTE--EEEEETTCEEEECTTSCEEEEESSC--EEEEE
T ss_pred CCceEEEEEEECCCCccCCEECC-CcEEEEEEeCEEEEEE---CCE--EEEECCCCEEEECCCCCEEEEECCC--ceEEE
Confidence 34678899999999999999996 5799999999999876 455 5899999999999999999999873 55444
Q ss_pred Ee
Q 040384 169 SF 170 (224)
Q Consensus 169 ~~ 170 (224)
++
T Consensus 109 v~ 110 (115)
T 1yhf_A 109 VV 110 (115)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 65
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.15 E-value=2.5e-10 Score=102.60 Aligned_cols=90 Identities=16% Similarity=-0.007 Sum_probs=74.0
Q ss_pred CCceEEEeecc-cCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecC
Q 040384 72 FGRAVTEGNVH-EFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPR 150 (224)
Q Consensus 72 ~g~~~~~~~~~-~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~ 150 (224)
.|+.+..++.. ..+.++++ ++....|+||++.++|||+.+ |+.||++|++++.+ +++ +..+++||++++|+
T Consensus 249 ~G~~~~~~np~t~~~~~~ti--~~~~~~l~pG~~~~~H~h~~~-ev~~v~~G~g~~~v---~~~--~~~~~~GD~~~vP~ 320 (354)
T 2d40_A 249 DGYKMRYVNPVTGGYPMPSM--GAFLQLLPKGFASRVARTTDS-TIYHVVEGSGQVII---GNE--TFSFSAKDIFVVPT 320 (354)
T ss_dssp TBEEEEECCTTTSSCSSSSC--EEEEEEECTTCBCCCBEESSC-EEEEEEEEEEEEEE---TTE--EEEEETTCEEEECT
T ss_pred CCeEEEEeCCCcCCCCCCcc--eeEEEEECCCCCCCceecCCc-EEEEEEeCeEEEEE---CCE--EEEEcCCCEEEECC
Confidence 46677777743 67777765 455669999999999999876 99999999999987 454 68999999999999
Q ss_pred CCeeEEEecCCccEEEEEEee
Q 040384 151 GLVHFQLNVGKENVLFFPSFN 171 (224)
Q Consensus 151 G~~H~~~N~G~~~a~~~~~~~ 171 (224)
+..|...|. +++.++++.+
T Consensus 321 ~~~H~~~n~--e~~~l~~~~d 339 (354)
T 2d40_A 321 WHGVSFQTT--QDSVLFSFSD 339 (354)
T ss_dssp TCCEEEEEE--EEEEEEEEES
T ss_pred CCeEEEEeC--CCEEEEEEcC
Confidence 999999994 6777777644
No 66
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=99.15 E-value=1.8e-10 Score=93.91 Aligned_cols=77 Identities=18% Similarity=0.095 Sum_probs=64.8
Q ss_pred ccccEEEEEEEEeCCcccC--ceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEE
Q 040384 88 NTQGISTNRVDLAVGGINP--PHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVL 165 (224)
Q Consensus 88 ~~~gis~~rv~l~pgg~~~--pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~ 165 (224)
.+..+.+.+++++||+..+ +|+| ...|++||++|++++.+ +++ ...|++||.+++|+|..|++.|.+++++
T Consensus 100 ~~~~~~~~~~~~~pg~~~~~~~H~h-~~~E~~~Vl~G~~~~~~---~~~--~~~l~~GD~i~i~~~~~H~~~n~~~~~~- 172 (192)
T 1y9q_A 100 ADTGLEIFEITLLDHHQQMSSPHAL-GVIEYIHVLEGIMKVFF---DEQ--WHELQQGEHIRFFSDQPHGYAAVTEKAV- 172 (192)
T ss_dssp TTTTEEEEEEEECTTCEEEECCCST-TCEEEEEEEESCEEEEE---TTE--EEEECTTCEEEEECSSSEEEEESSSCEE-
T ss_pred CCCcEEEEEEEECCCCCccCCCCCC-CCEEEEEEEEeEEEEEE---CCE--EEEeCCCCEEEEcCCCCeEeECCCCCcE-
Confidence 3446889999999999876 6777 45799999999999876 454 6899999999999999999999999888
Q ss_pred EEEEee
Q 040384 166 FFPSFN 171 (224)
Q Consensus 166 ~~~~~~ 171 (224)
++.++.
T Consensus 173 ~l~v~~ 178 (192)
T 1y9q_A 173 FQNIVA 178 (192)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 666553
No 67
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=99.15 E-value=1.9e-10 Score=93.25 Aligned_cols=74 Identities=20% Similarity=0.132 Sum_probs=64.7
Q ss_pred cEEEEEEEEeC-CcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEE
Q 040384 91 GISTNRVDLAV-GGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPS 169 (224)
Q Consensus 91 gis~~rv~l~p-gg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~ 169 (224)
-+....++++| |+...+|.|.++.|++||++|++.+.+ +++ .+.|++||.+++|+|..|.+.|.++++++++.+
T Consensus 87 ~~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl---~g~--~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll~V 161 (166)
T 2vpv_A 87 YFASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTV---CKN--KFLSVKGSTFQIPAFNEYAIANRGNDEAKMFFV 161 (166)
T ss_dssp SCEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEE---TTE--EEEEETTCEEEECTTCEEEEEECSSSCEEEEEE
T ss_pred cceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEE---CCE--EEEEcCCCEEEECCCCCEEEEECCCCCEEEEEE
Confidence 46777899999 877778777689999999999999987 455 689999999999999999999999999987754
No 68
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=99.13 E-value=2.5e-10 Score=83.99 Aligned_cols=77 Identities=14% Similarity=0.117 Sum_probs=62.5
Q ss_pred cccEEEEEEEEeCCcccCceecCCCCce-EEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEE
Q 040384 89 TQGISTNRVDLAVGGINPPHLHPRSSES-SIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFF 167 (224)
Q Consensus 89 ~~gis~~rv~l~pgg~~~pH~Hp~a~Ei-~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~ 167 (224)
+.++.+.++.+.||...++|+|+...|+ +||++|++++.+- +++ ...+++||++++|+|..|.+.|.++ ..++
T Consensus 30 ~~~~~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~~--~~~--~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~l 103 (110)
T 2q30_A 30 SENFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVGD--GDA--VIPAPRGAVLVAPISTPHGVRAVTD--MKVL 103 (110)
T ss_dssp CSSCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEECG--GGC--EEEECTTEEEEEETTSCEEEEESSS--EEEE
T ss_pred CCCEEEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEeC--CCE--EEEECCCCEEEeCCCCcEEEEEcCC--cEEE
Confidence 3467888999999999999999755688 8999999998751 134 5899999999999999999999875 4455
Q ss_pred EEee
Q 040384 168 PSFN 171 (224)
Q Consensus 168 ~~~~ 171 (224)
.++.
T Consensus 104 ~~~~ 107 (110)
T 2q30_A 104 VTIA 107 (110)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 5543
No 69
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.11 E-value=3.9e-10 Score=95.85 Aligned_cols=79 Identities=15% Similarity=0.132 Sum_probs=68.3
Q ss_pred cEEEEEEEEeC-CcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEE
Q 040384 91 GISTNRVDLAV-GGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPS 169 (224)
Q Consensus 91 gis~~rv~l~p-gg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~ 169 (224)
-+.+..+.++| |+..++|||+. .|++||++|++++.+ +++ ...+++||.+++|+|..|.+.|.|++++.++.+
T Consensus 144 ~~~~~~~~~~p~g~~~~~H~H~~-~e~~~Vl~G~~~~~i---~~~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v 217 (243)
T 3h7j_A 144 WVEIMLAKIPGNGGEMPFHKHRN-EQIGICIGGGYDMTV---EGC--TVEMKFGTAYFCEPREDHGAINRSEKESKSINI 217 (243)
T ss_dssp TEEEEEEEECTTTEEEEEECCSS-EEEEEECSSCEEEEE---TTE--EEEECTTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred eeEEEEEEECCCCCcCCCEeCCC-cEEEEEEECEEEEEE---CCE--EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 35677788999 88999999975 799999999999886 454 678999999999999999999999999999988
Q ss_pred eeCCCC
Q 040384 170 FNSQLP 175 (224)
Q Consensus 170 ~~s~~p 175 (224)
+.....
T Consensus 218 ~~p~~~ 223 (243)
T 3h7j_A 218 FFPPRY 223 (243)
T ss_dssp EESCSS
T ss_pred EcCChh
Confidence 874443
No 70
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.11 E-value=5.3e-10 Score=98.14 Aligned_cols=79 Identities=16% Similarity=0.156 Sum_probs=68.7
Q ss_pred ccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEE
Q 040384 90 QGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPS 169 (224)
Q Consensus 90 ~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~ 169 (224)
..+++.++.+.||+..++|||++..|++||++|++++.+ +++ ...|++||++++|+|..|.+.|.++ ++.++.+
T Consensus 44 ~~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~---~~~--~~~l~~Gd~~~~p~~~~H~~~n~~~-~~~~~~~ 117 (337)
T 1y3t_A 44 DLFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTL---DGE--RYLLISGDYANIPAGTPHSYRMQSH-RTRLVSY 117 (337)
T ss_dssp SSEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEE---TTE--EEEECTTCEEEECTTCCEEEEECST-TEEEEEE
T ss_pred CeEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEE---CCE--EEEECCCCEEEECCCCcEEEEECCC-CeEEEEE
Confidence 368899999999999999999768999999999999986 455 5899999999999999999999987 5877777
Q ss_pred eeCCC
Q 040384 170 FNSQL 174 (224)
Q Consensus 170 ~~s~~ 174 (224)
++...
T Consensus 118 ~~p~~ 122 (337)
T 1y3t_A 118 TMKGN 122 (337)
T ss_dssp EETTS
T ss_pred ECCCC
Confidence 66443
No 71
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.10 E-value=2.1e-10 Score=103.14 Aligned_cols=76 Identities=18% Similarity=0.286 Sum_probs=67.4
Q ss_pred cEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEEe
Q 040384 91 GISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSF 170 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~ 170 (224)
.+.+....+.||+..++|+|+ ..|++||++|++++..++ ++ ...+++||++++|+|..|...|.+++++.++.+.
T Consensus 99 ~l~~~~~~l~PG~~~~~H~H~-~~e~~yVl~G~g~~t~v~--g~--~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~v~ 173 (354)
T 2d40_A 99 TLYAGLQLIMPGEVAPSHRHN-QSALRFIVEGKGAFTAVD--GE--RTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDGL 173 (354)
T ss_dssp SCEEEEEEECTTCEEEEEEES-SCEEEEEEECSSCEEEET--TE--EEECCTTCEEEECTTSCEEEECCSSSCEEEEEEE
T ss_pred cEEEEEEEECCCCCcCCeecC-cceEEEEEEEEEEEEEEC--CE--EEEEcCCCEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 678999999999999999995 679999999999885553 54 6899999999999999999999999999888776
Q ss_pred e
Q 040384 171 N 171 (224)
Q Consensus 171 ~ 171 (224)
+
T Consensus 174 d 174 (354)
T 2d40_A 174 D 174 (354)
T ss_dssp C
T ss_pred C
Confidence 4
No 72
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.09 E-value=5.6e-10 Score=85.38 Aligned_cols=73 Identities=18% Similarity=0.117 Sum_probs=60.5
Q ss_pred cEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEEe
Q 040384 91 GISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSF 170 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~ 170 (224)
.+++..+.++||+-. |||....|++||++|++++.+ +++ ...|++||+++||+|..|++.|.+ +++.++.+.
T Consensus 39 ~~~~~~~~~~pG~~~--~~H~~~~E~~~Vl~G~~~~~~---~g~--~~~l~~GD~v~ip~g~~H~~~~~~-~~~~~l~v~ 110 (119)
T 3lwc_A 39 PITIGYGRYAPGQSL--TETMAVDDVMIVLEGRLSVST---DGE--TVTAGPGEIVYMPKGETVTIRSHE-EGALTAYVT 110 (119)
T ss_dssp CCEEEEEEECTTCEE--EEECSSEEEEEEEEEEEEEEE---TTE--EEEECTTCEEEECTTCEEEEEEEE-EEEEEEEEE
T ss_pred CEEEEEEEECCCCCc--CccCCCCEEEEEEeCEEEEEE---CCE--EEEECCCCEEEECCCCEEEEEcCC-CCeEEEEEE
Confidence 578889999999865 566678899999999999987 455 689999999999999999998875 566666554
Q ss_pred e
Q 040384 171 N 171 (224)
Q Consensus 171 ~ 171 (224)
.
T Consensus 111 ~ 111 (119)
T 3lwc_A 111 Y 111 (119)
T ss_dssp E
T ss_pred C
Confidence 4
No 73
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.08 E-value=1.1e-09 Score=94.66 Aligned_cols=76 Identities=16% Similarity=0.233 Sum_probs=67.2
Q ss_pred ccEEEEEEEEeCCcccCc-eecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCC-ccEEEE
Q 040384 90 QGISTNRVDLAVGGINPP-HLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGK-ENVLFF 167 (224)
Q Consensus 90 ~gis~~rv~l~pgg~~~p-H~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~-~~a~~~ 167 (224)
..+.+.++.++||+..+. |||+ ..|++||++|++++.+ +++ ...|++||++++|++..|++.|.++ +++.++
T Consensus 180 ~~~~~~~~~l~pg~~~~~~H~H~-~~E~~yVl~G~~~~~i---~~~--~~~l~~GD~i~i~~~~~H~~~n~~~~~~~~~l 253 (274)
T 1sef_A 180 FDMNMHILSFEPGASHAYIETHV-QEHGAYLISGQGMYNL---DNE--WYPVEKGDYIFMSAYVPQAAYAVGREEPLMYV 253 (274)
T ss_dssp CSEEEEEEEECTTCBCSSCBCCS-CCEEEEEEECEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEEECSSSCEEEE
T ss_pred CCEEEEEEEECCCCccCcceecc-CeEEEEEEeCEEEEEE---CCE--EEEECCCCEEEECCCCCEEEEeCCCCCCEEEE
Confidence 478899999999999988 9995 5899999999999987 455 6899999999999999999999998 888877
Q ss_pred EEee
Q 040384 168 PSFN 171 (224)
Q Consensus 168 ~~~~ 171 (224)
...+
T Consensus 254 ~~~~ 257 (274)
T 1sef_A 254 YSKD 257 (274)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 6644
No 74
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=99.06 E-value=1.6e-09 Score=80.84 Aligned_cols=71 Identities=10% Similarity=0.167 Sum_probs=59.4
Q ss_pred cEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEE
Q 040384 91 GISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPS 169 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~ 169 (224)
++.+..+.+.||...++|||+ ..|++||++|++++.+ +++ ...|++||.+++|+|..|.+.|.+ ++.++.+
T Consensus 37 ~~~~~~~~~~~g~~~~~H~h~-~~e~~~vl~G~~~~~i---~~~--~~~l~~Gd~i~i~~~~~H~~~~~~--~~~~~~i 107 (114)
T 2ozj_A 37 RVQISLFSFADGESVSEEEYF-GDTLYLILQGEAVITF---DDQ--KIDLVPEDVLMVPAHKIHAIAGKG--RFKMLQI 107 (114)
T ss_dssp SEEEEEEEEETTSSCCCBCCS-SCEEEEEEEEEEEEEE---TTE--EEEECTTCEEEECTTCCBEEEEEE--EEEEEEE
T ss_pred CceEEEEEECCCCccccEECC-CCeEEEEEeCEEEEEE---CCE--EEEecCCCEEEECCCCcEEEEeCC--CcEEEEE
Confidence 456777888999999999996 5899999999999886 454 689999999999999999999863 4555443
No 75
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.03 E-value=2.6e-09 Score=93.70 Aligned_cols=75 Identities=15% Similarity=0.107 Sum_probs=62.5
Q ss_pred EEEEEEeC-CcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEEeeC
Q 040384 94 TNRVDLAV-GGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSFNS 172 (224)
Q Consensus 94 ~~rv~l~p-gg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~~s 172 (224)
...+.+.| |...++|||++..|++||++|++++.+ +++ ...|++||++++|++..|++.|.++ ++.++.+++.
T Consensus 219 ~~~~~~~p~g~~~~~h~H~~~~e~~~vl~G~~~~~i---~~~--~~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v~~~ 292 (337)
T 1y3t_A 219 IVVSSEGPKGDRIVDHYHEYHTETFYCLEGQMTMWT---DGQ--EIQLNPGDFLHVPANTVHSYRLDSH-YTKMVGVLVP 292 (337)
T ss_dssp EEEEEEECSCCCCCCEECSSCEEEEEEEESCEEEEE---TTE--EEEECTTCEEEECTTCCEEEEECSS-SEEEEEEEES
T ss_pred EEEEEEcCCCCCCCCcCCCCCcEEEEEEeCEEEEEE---CCE--EEEECCCCEEEECCCCeEEEEECCC-CeEEEEEEcC
Confidence 34456656 567789999867899999999999987 454 6899999999999999999999998 8888888765
Q ss_pred CC
Q 040384 173 QL 174 (224)
Q Consensus 173 ~~ 174 (224)
..
T Consensus 293 ~~ 294 (337)
T 1y3t_A 293 GL 294 (337)
T ss_dssp ST
T ss_pred cc
Confidence 43
No 76
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=99.03 E-value=1.4e-09 Score=97.42 Aligned_cols=81 Identities=14% Similarity=0.105 Sum_probs=64.2
Q ss_pred cEEEEEEEEeCCcc-cC--ceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEE
Q 040384 91 GISTNRVDLAVGGI-NP--PHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFF 167 (224)
Q Consensus 91 gis~~rv~l~pgg~-~~--pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~ 167 (224)
.+++. ..+.|++. .+ +|||++..|++||++|++++.+-+.+|+...+.|++||++++|+|..|++.|.++++ .++
T Consensus 47 ~~~~~-~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~-~~l 124 (350)
T 1juh_A 47 AFTLM-GTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDT-EMT 124 (350)
T ss_dssp SCEEE-EEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECSTTE-EEE
T ss_pred cEEEE-EEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCCCCC-EEE
Confidence 45666 45556554 45 899987899999999999998866445445789999999999999999999998876 666
Q ss_pred EEeeCC
Q 040384 168 PSFNSQ 173 (224)
Q Consensus 168 ~~~~s~ 173 (224)
.++...
T Consensus 125 ~v~~p~ 130 (350)
T 1juh_A 125 GVIVPG 130 (350)
T ss_dssp EEEESS
T ss_pred EEEcCc
Confidence 666543
No 77
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=99.01 E-value=1e-09 Score=81.11 Aligned_cols=66 Identities=15% Similarity=0.213 Sum_probs=52.0
Q ss_pred EEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCC-eEEEEEECCCCEEEecCCCeeEEEecCCccEEEE
Q 040384 94 TNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDN-VFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFF 167 (224)
Q Consensus 94 ~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~-~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~ 167 (224)
..++.+.||. .++|+|+...|++||++|++++.+ ++ + ...+++||++++|+|..|.+.|.+ ++.++
T Consensus 30 ~~~~~~~~g~-~~~H~H~~~~E~~~Vl~G~~~~~~---~~~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l 96 (107)
T 2i45_A 30 QFHLVKLLGD-YGWHTHGYSDKVLFAVEGDMAVDF---ADGG--SMTIREGEMAVVPKSVSHRPRSEN--GCSLV 96 (107)
T ss_dssp EEEEEEEEEE-CCCBCC--CCEEEEESSSCEEEEE---TTSC--EEEECTTEEEEECTTCCEEEEEEE--EEEEE
T ss_pred EEEEEECCCC-CcceeCCCCCEEEEEEeCEEEEEE---CCCc--EEEECCCCEEEECCCCcEeeEeCC--CeEEE
Confidence 4456677877 459999766899999999999886 33 4 689999999999999999999953 45544
No 78
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=98.99 E-value=2e-09 Score=78.09 Aligned_cols=64 Identities=25% Similarity=0.392 Sum_probs=50.9
Q ss_pred ccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecC
Q 040384 88 NTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVG 160 (224)
Q Consensus 88 ~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G 160 (224)
++..+++.++ . +..++|||+...|++||++|++++.+ +++ ...+++||++++|+|..|...|.+
T Consensus 29 ~~~~~~~~~~--~--~~~~~H~H~~~~e~~~v~~G~~~~~~---~~~--~~~l~~Gd~~~ip~~~~H~~~~~~ 92 (102)
T 3d82_A 29 NDYQFKLVKV--E--GEFVWHEHADTDEVFIVMEGTLQIAF---RDQ--NITLQAGEMYVIPKGVEHKPMAKE 92 (102)
T ss_dssp TTEEEEEEEE--E--EECCCBCCTTCCEEEEEEESEEEEEC---SSC--EEEEETTEEEEECTTCCBEEEEEE
T ss_pred CCCEEEEEEE--C--CCCCceeCCCCcEEEEEEeCEEEEEE---CCE--EEEEcCCCEEEECCCCeEeeEcCC
Confidence 3334444444 3 45889999876899999999999876 344 589999999999999999999974
No 79
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.97 E-value=2.8e-09 Score=97.09 Aligned_cols=78 Identities=15% Similarity=0.172 Sum_probs=68.7
Q ss_pred cccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEe-cCCccEEEE
Q 040384 89 TQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLN-VGKENVLFF 167 (224)
Q Consensus 89 ~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N-~G~~~a~~~ 167 (224)
+-.+.+....+.||+..++|.|.. .|+.||++|++....+ +|+ +..+++||++++|.|..|...| .|+++++++
T Consensus 120 t~~L~a~~~~l~PG~~~~~HrH~~-~ev~~IleG~G~~t~v--~G~--~~~~~~GD~i~~P~g~~H~~~N~~gde~l~~l 194 (394)
T 3bu7_A 120 CGWLFSGIQTMKAGERAGAHRHAA-SALRFIMEGSGAYTIV--DGH--KVELGANDFVLTPNGTWHEHGILESGTECIWQ 194 (394)
T ss_dssp BTTBEEEEEEECTTCBCCCEEESS-CEEEEEEECSCEEEEE--TTE--EEEECTTCEEEECTTCCEEEEECTTCCCEEEE
T ss_pred CCeeEEEEEEECCCCCcCCccCCc-ceEEEEEEeeEEEEEE--CCE--EEEEcCCCEEEECcCCCEEEEcCCCCCCEEEE
Confidence 447899999999999999999965 6999999999966444 465 6899999999999999999999 999999999
Q ss_pred EEee
Q 040384 168 PSFN 171 (224)
Q Consensus 168 ~~~~ 171 (224)
++++
T Consensus 195 ~v~d 198 (394)
T 3bu7_A 195 DGLD 198 (394)
T ss_dssp EEEC
T ss_pred Eccc
Confidence 8765
No 80
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=98.97 E-value=2.1e-09 Score=91.32 Aligned_cols=74 Identities=16% Similarity=0.150 Sum_probs=64.1
Q ss_pred EEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEE-ecCCCeeEEEecCCccEEEEEEe
Q 040384 92 ISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFL-IPRGLVHFQLNVGKENVLFFPSF 170 (224)
Q Consensus 92 is~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~v-vP~G~~H~~~N~G~~~a~~~~~~ 170 (224)
..+.+..++||+..++|||+ ..|++||++|++++.+ +++ ...|++||.++ +|+|..|.+.|.++++++++.+.
T Consensus 34 ~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~~---~~~--~~~l~~Gd~i~~ip~~~~H~~~n~~~~~~~~l~i~ 107 (243)
T 3h7j_A 34 TEVLMSYVPPHTNVEPHQHK-EVQIGMVVSGELMMTV---GDV--TRKMTALESAYIAPPHVPHGARNDTDQEVIAIDIK 107 (243)
T ss_dssp EEEEEEEECTTEEEEEECCS-SEEEEEEEESEEEEEE---TTE--EEEEETTTCEEEECTTCCEEEEECSSSCEEEEEEE
T ss_pred CEEEEEEECCCCccCCEECC-CcEEEEEEEeEEEEEE---CCE--EEEECCCCEEEEcCCCCcEeeEeCCCCcEEEEEEe
Confidence 46667789999999999997 6899999999999986 455 68999999885 99999999999999999887664
Q ss_pred e
Q 040384 171 N 171 (224)
Q Consensus 171 ~ 171 (224)
.
T Consensus 108 r 108 (243)
T 3h7j_A 108 R 108 (243)
T ss_dssp E
T ss_pred c
Confidence 3
No 81
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.97 E-value=6.6e-09 Score=88.55 Aligned_cols=77 Identities=14% Similarity=0.179 Sum_probs=67.5
Q ss_pred cccEEEEEEEEeCCcccCc-eecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEE
Q 040384 89 TQGISTNRVDLAVGGINPP-HLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFF 167 (224)
Q Consensus 89 ~~gis~~rv~l~pgg~~~p-H~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~ 167 (224)
+..+.+.+++++||+..+. |.| ...|.+||++|++.+.+ +++ ...|++||++.++.+..|+++|.|+++++++
T Consensus 162 ~~~~~~~~~tl~PG~~~~~~~~h-~~ee~~~vLeG~~~~~~---~~~--~~~l~~GD~~~~~~~~pH~~~n~g~~~~~yl 235 (246)
T 1sfn_A 162 AFDFMVSTMSFAPGASLPYAEVH-YMEHGLLMLEGEGLYKL---EEN--YYPVTAGDIIWMGAHCPQWYGALGRNWSKYL 235 (246)
T ss_dssp TCSEEEEEEEECTTCBCSSCBCC-SSCEEEEEEECEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEEESSSCEEEE
T ss_pred CCCeEEEEEEECCCCccCcccCC-CceEEEEEEECEEEEEE---CCE--EEEcCCCCEEEECCCCCEEEEcCCCCCEEEE
Confidence 5578999999999999986 556 56899999999999886 565 6799999999999999999999999999887
Q ss_pred EEee
Q 040384 168 PSFN 171 (224)
Q Consensus 168 ~~~~ 171 (224)
.+-|
T Consensus 236 ~~kd 239 (246)
T 1sfn_A 236 LYKD 239 (246)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6654
No 82
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=98.96 E-value=2.5e-09 Score=83.41 Aligned_cols=71 Identities=15% Similarity=0.128 Sum_probs=59.1
Q ss_pred cEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEEe
Q 040384 91 GISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSF 170 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~ 170 (224)
.+++..+.++|| ..|||....|++||++|++++.+ +++ ...|++||.+++|+|..|.+.|. ++++++.++
T Consensus 56 ~~~~~~~~~~pG---~~~~h~~~~E~~~VLeG~~~l~~---~g~--~~~l~~GD~i~~p~g~~h~~~~~--~~~~~l~v~ 125 (133)
T 2pyt_A 56 SMAAGFMQWDNA---FFPWTLNYDEIDMVLEGELHVRH---EGE--TMIAKAGDVMFIPKGSSIEFGTP--TSVRFLYVA 125 (133)
T ss_dssp SSEEEEEEEEEE---EEEEECSSEEEEEEEEEEEEEEE---TTE--EEEEETTCEEEECTTCEEEEEEE--EEEEEEEEE
T ss_pred cEEEEEEEECCC---CccccCCCCEEEEEEECEEEEEE---CCE--EEEECCCcEEEECCCCEEEEEeC--CCEEEEEEE
Confidence 578888999999 46777778999999999999886 455 57999999999999999999874 467766665
Q ss_pred e
Q 040384 171 N 171 (224)
Q Consensus 171 ~ 171 (224)
.
T Consensus 126 ~ 126 (133)
T 2pyt_A 126 W 126 (133)
T ss_dssp E
T ss_pred c
Confidence 4
No 83
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.96 E-value=9.7e-09 Score=93.55 Aligned_cols=75 Identities=15% Similarity=0.115 Sum_probs=66.4
Q ss_pred cEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecC-CccEEEEEE
Q 040384 91 GISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVG-KENVLFFPS 169 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G-~~~a~~~~~ 169 (224)
.+.+....++||+..++|.|. ..|++||++|++++.+ +++ +..+++||++++|+|..|...|.| ++++.++++
T Consensus 293 tl~~~~~~l~PG~~~~~HrH~-~~~v~~VleG~G~~~V---~ge--~~~~~~GD~~~iP~g~~H~~~N~g~~e~~~ll~i 366 (394)
T 3bu7_A 293 TMGASMQMLRPGEHTKAHRHT-GNVIYNVAKGQGYSIV---GGK--RFDWSEHDIFCVPAWTWHEHCNTQERDDACLFSF 366 (394)
T ss_dssp SCEEEEEEECTTCBCCCEEES-SCEEEEEEECCEEEEE---TTE--EEEECTTCEEEECTTCCEEEEECCSSCCEEEEEE
T ss_pred eeeEEEEEECCCCcCCCcccC-CcEEEEEEeCeEEEEE---CCE--EEEEeCCCEEEECCCCeEEeEeCCCCCCeEEEEe
Confidence 578889999999999999996 5699999999998776 455 689999999999999999999998 788888877
Q ss_pred ee
Q 040384 170 FN 171 (224)
Q Consensus 170 ~~ 171 (224)
.+
T Consensus 367 ~D 368 (394)
T 3bu7_A 367 ND 368 (394)
T ss_dssp ES
T ss_pred eC
Confidence 54
No 84
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=98.96 E-value=4.1e-09 Score=79.32 Aligned_cols=80 Identities=15% Similarity=0.247 Sum_probs=59.6
Q ss_pred ccccEEEEEEEEeCCcccCce--ecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCc-cE
Q 040384 88 NTQGISTNRVDLAVGGINPPH--LHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKE-NV 164 (224)
Q Consensus 88 ~~~gis~~rv~l~pgg~~~pH--~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~-~a 164 (224)
++.++.+.++. .+|...+++ +|....|++||++|++++.+ +++.....|++||.+++|+|..|.+.|.+++ ++
T Consensus 27 ~~~~~~i~~i~-~~g~~~~~~~~~~~~~~E~~~Vl~G~~~l~~---~~~~~~~~l~~Gd~i~ipa~~~H~~~n~~~~~~~ 102 (112)
T 2opk_A 27 ERKGLKIERII-SNGQASPPGFWYDSPQDEWVMVVSGSAGIEC---EGDTAPRVMRPGDWLHVPAHCRHRVAWTDGGEPT 102 (112)
T ss_dssp EETTEEEEEEE-ESSCCCCTTCCBCCSSEEEEEEEESCEEEEE---TTCSSCEEECTTEEEEECTTCCEEEEEECSSSCE
T ss_pred cCCCEEEEEEE-eCCccCCCCccccCCccEEEEEEeCeEEEEE---CCEEEEEEECCCCEEEECCCCcEEEEeCCCCCCE
Confidence 44467777775 556555552 34467899999999999987 3331117999999999999999999999976 56
Q ss_pred EEEEEee
Q 040384 165 LFFPSFN 171 (224)
Q Consensus 165 ~~~~~~~ 171 (224)
++++++.
T Consensus 103 ~~l~v~~ 109 (112)
T 2opk_A 103 VWLAVHC 109 (112)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 6676654
No 85
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.95 E-value=1.8e-09 Score=97.56 Aligned_cols=78 Identities=15% Similarity=0.209 Sum_probs=68.4
Q ss_pred ccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEE
Q 040384 90 QGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPS 169 (224)
Q Consensus 90 ~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~ 169 (224)
-.+.+....+.||+..++|.|. ..|+.||++|++....+ +|+ +..+++||++++|.|..|...|.|+++++++.+
T Consensus 101 ~~L~a~~~~l~PG~~~~~HrH~-~~ev~~VleG~G~~~~v--dG~--~~~~~~GD~v~iP~g~~H~~~N~gde~l~~l~v 175 (368)
T 3nw4_A 101 PTMWAAIQYLGPRETAPEHRHS-QNAFRFVVEGEGVWTVV--NGD--PVRMSRGDLLLTPGWCFHGHMNDTDQPMAWIDG 175 (368)
T ss_dssp SSCEEEEEEECTTCEEEEEEES-SCEEEECSSCEEEEEEE--TTE--EEEEETTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred CceEEEEEEECCCCccCceecc-cceEEEEEecceEEEEE--CCE--EEEEeCCCEEEECCCCcEEeEeCCCCCeEEEEe
Confidence 4688999999999999999996 57999999999953333 465 689999999999999999999999999999988
Q ss_pred eeC
Q 040384 170 FNS 172 (224)
Q Consensus 170 ~~s 172 (224)
+|.
T Consensus 176 ~D~ 178 (368)
T 3nw4_A 176 LDI 178 (368)
T ss_dssp ECH
T ss_pred cch
Confidence 763
No 86
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=98.95 E-value=2.3e-09 Score=93.21 Aligned_cols=77 Identities=18% Similarity=0.185 Sum_probs=66.2
Q ss_pred cccEEEEEEEEeCCccc--CceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEE
Q 040384 89 TQGISTNRVDLAVGGIN--PPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLF 166 (224)
Q Consensus 89 ~~gis~~rv~l~pgg~~--~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~ 166 (224)
+..+.+.+++++||+.. +.|.| ...|++||++|++++.+ +++ ...|++||.+++|+|..|.+.|.|++++.+
T Consensus 65 ~~~~~~~~~~l~PG~~~~~~~h~H-~~eE~~~Vl~G~l~v~v---~g~--~~~L~~GD~i~ip~~~~H~~~N~g~~~~~~ 138 (278)
T 1sq4_A 65 AETFSQYIVELAPNGGSDKPEQDP-NAEAVLFVVEGELSLTL---QGQ--VHAMQPGGYAFIPPGADYKVRNTTGQHTRF 138 (278)
T ss_dssp CCSCEEEEEEEEEEEEESSCCCCT-TEEEEEEEEESCEEEEE---SSC--EEEECTTEEEEECTTCCEEEECCSSSCEEE
T ss_pred CCcEEEEEEEECCCCccCCCCcCC-CceEEEEEEeCEEEEEE---CCE--EEEECCCCEEEECCCCcEEEEECCCCCEEE
Confidence 34689999999999877 45778 46899999999999987 344 689999999999999999999999999988
Q ss_pred EEEee
Q 040384 167 FPSFN 171 (224)
Q Consensus 167 ~~~~~ 171 (224)
+.+..
T Consensus 139 l~v~~ 143 (278)
T 1sq4_A 139 HWIRK 143 (278)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 77664
No 87
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=98.92 E-value=3.1e-09 Score=91.08 Aligned_cols=77 Identities=17% Similarity=0.151 Sum_probs=66.1
Q ss_pred ccEEEEEEEEeCCcccCceec-CCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEE
Q 040384 90 QGISTNRVDLAVGGINPPHLH-PRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFP 168 (224)
Q Consensus 90 ~gis~~rv~l~pgg~~~pH~H-p~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~ 168 (224)
..+.+.+++++||+....|.| +...|++||++|++++.+ +++ ...|++||.+++|++..|.+.|.|++++.++.
T Consensus 57 ~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~---~~~--~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l~ 131 (261)
T 1rc6_A 57 ASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKA---EGK--TFALSEGGYLYCPPGSLMTFVNAQAEDSQIFL 131 (261)
T ss_dssp CSSEEEEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEE---TTE--EEEEETTEEEEECTTCCCEEEECSSSCEEEEE
T ss_pred CcEEEEEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEE---CCE--EEEECCCCEEEECCCCCEEEEeCCCCCEEEEE
Confidence 357888999999998776655 456789999999999987 455 68999999999999999999999999998887
Q ss_pred Eee
Q 040384 169 SFN 171 (224)
Q Consensus 169 ~~~ 171 (224)
+..
T Consensus 132 v~~ 134 (261)
T 1rc6_A 132 YKR 134 (261)
T ss_dssp EEE
T ss_pred EEe
Confidence 764
No 88
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=98.92 E-value=5.9e-09 Score=83.66 Aligned_cols=70 Identities=16% Similarity=0.211 Sum_probs=56.6
Q ss_pred EEEEEEEEeCCcccCceecCCCCceEEEEe--CeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEE
Q 040384 92 ISTNRVDLAVGGINPPHLHPRSSESSIVIR--GTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPS 169 (224)
Q Consensus 92 is~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~--G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~ 169 (224)
+++..+.+ ++..++|||+...|++||++ |++++.+ +++ .+.+++||+++||+|..|.+. + ++.++++
T Consensus 47 ~sv~~v~~--g~~~~~H~H~~~~E~~yVLe~~G~g~v~i---dge--~~~l~~GD~v~IPpg~~H~i~--g--~l~~L~I 115 (157)
T 4h7l_A 47 VSVHYTQI--TKAARTHYHREHQEIYVVLDHAAHATIEL---NGQ--SYPLTKLLAISIPPLVRHRIV--G--EATIINI 115 (157)
T ss_dssp CEEEEEEE--CSCCCCBBCSSCEEEEEEEEECTTCEEEE---TTE--EEECCTTEEEEECTTCCEEEE--S--CEEEEEE
T ss_pred EEEEEEeC--CCCccceECCCCcEEEEEEecCcEEEEEE---CCE--EEEeCCCCEEEECCCCeEeeE--C--CEEEEEE
Confidence 34444444 55668999988889999999 9999987 465 689999999999999999997 3 6888877
Q ss_pred eeC
Q 040384 170 FNS 172 (224)
Q Consensus 170 ~~s 172 (224)
+..
T Consensus 116 ~~P 118 (157)
T 4h7l_A 116 VSP 118 (157)
T ss_dssp EES
T ss_pred ECC
Confidence 653
No 89
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.88 E-value=6.2e-09 Score=87.58 Aligned_cols=71 Identities=18% Similarity=0.205 Sum_probs=60.7
Q ss_pred cEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEE
Q 040384 91 GISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFP 168 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~ 168 (224)
.+++..+.++||...++|+|+ ..|++||++|++++.+ +++ ...+++||.+++|+|..|++.|. .+++.++.
T Consensus 152 ~~~~~~~~~~~G~~~~~H~H~-~~e~~~Vl~G~~~~~i---~g~--~~~l~~Gd~i~ip~~~~H~~~~~-~~~~~~ll 222 (227)
T 3rns_A 152 NLVMTIMSFWKGESLDPHKAP-GDALVTVLDGEGKYYV---DGK--PFIVKKGESAVLPANIPHAVEAE-TENFKMLL 222 (227)
T ss_dssp TEEEEEEEECTTCEEEEECCS-SEEEEEEEEEEEEEEE---TTE--EEEEETTEEEEECTTSCEEEECC-SSCEEEEE
T ss_pred CeEEEEEEECCCCccCCEECC-CcEEEEEEeEEEEEEE---CCE--EEEECCCCEEEECCCCcEEEEeC-CCCEEEEE
Confidence 578899999999999999997 5799999999999986 455 68999999999999999999982 34455444
No 90
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=98.86 E-value=1.2e-08 Score=88.66 Aligned_cols=82 Identities=15% Similarity=0.136 Sum_probs=70.6
Q ss_pred CCCccccEEEEEEEEeCCcccCc-eecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCcc
Q 040384 85 PGVNTQGISTNRVDLAVGGINPP-HLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKEN 163 (224)
Q Consensus 85 P~l~~~gis~~rv~l~pgg~~~p-H~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~ 163 (224)
|.-....+.+.+++++||+..+. |.| .-.|.+||++|++.+.+ +++ ...|++||++.++.|..|+++|.|+++
T Consensus 184 p~~~~~~~~~~~~~l~pG~~i~~~~~h-~~e~~~~il~G~~~~~~---~~~--~~~v~~GD~~~~~~~~~h~~~n~g~~~ 257 (278)
T 1sq4_A 184 MSDMRHDMHVNIVNFEPGGVIPFAETH-VMEHGLYVLEGKAVYRL---NQD--WVEVEAGDFMWLRAFCPQACYSGGPGR 257 (278)
T ss_dssp TTCTTCSEEEEEEEECSSSEESCCCCC-SEEEEEEEEECEEEEEE---TTE--EEEEETTCEEEEEESCCEEEECCSSSC
T ss_pred CCCcCCCeEEEEEEECCCCCcCCCCCC-CccEEEEEEeCEEEEEE---CCE--EEEeCCCCEEEECCCCCEEEEcCCCCC
Confidence 43345689999999999999996 556 55789999999999876 565 789999999999999999999999999
Q ss_pred EEEEEEeeC
Q 040384 164 VLFFPSFNS 172 (224)
Q Consensus 164 a~~~~~~~s 172 (224)
++++.+.|-
T Consensus 258 ~~yl~~~d~ 266 (278)
T 1sq4_A 258 FRYLLYKDV 266 (278)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEEc
Confidence 999988863
No 91
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=98.85 E-value=2.6e-08 Score=82.29 Aligned_cols=79 Identities=15% Similarity=0.208 Sum_probs=63.6
Q ss_pred EEEEEEEeCCc----------ccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCc
Q 040384 93 STNRVDLAVGG----------INPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKE 162 (224)
Q Consensus 93 s~~rv~l~pgg----------~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~ 162 (224)
+...+.+.|+. ..++|+|+. .|++||++|++.+.+.+.+++.+...+++||+++||+|..|+..+..+.
T Consensus 75 ~~D~v~~~p~~~p~~~~k~~~~~~~H~H~~-~Ei~yVleG~G~f~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~~ 153 (191)
T 1vr3_A 75 WMDIITICKDTLPNYEEKIKMFFEEHLHLD-EEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKN 153 (191)
T ss_dssp EEEEEEESTTTSTTHHHHHHHHHSCEECSS-CEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECTTC
T ss_pred ceeEEEECCCcCcchhhhhccCCcceECCc-ceEEEEEeceEEEEECCCCCeEEEEEECCCCEEEECcCCcCCcccCCCC
Confidence 45556677765 348899976 7999999999999987654666678999999999999999999887666
Q ss_pred cEEEEEEeeC
Q 040384 163 NVLFFPSFNS 172 (224)
Q Consensus 163 ~a~~~~~~~s 172 (224)
....+-+|..
T Consensus 154 ~~~airlF~~ 163 (191)
T 1vr3_A 154 YVKAMRLFVG 163 (191)
T ss_dssp CEEEEEEESS
T ss_pred CEEEEEEECC
Confidence 6777777753
No 92
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=98.84 E-value=6.9e-09 Score=89.66 Aligned_cols=77 Identities=12% Similarity=0.067 Sum_probs=65.5
Q ss_pred ccEEEEEEEEeCCcccCceec-CCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEE
Q 040384 90 QGISTNRVDLAVGGINPPHLH-PRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFP 168 (224)
Q Consensus 90 ~gis~~rv~l~pgg~~~pH~H-p~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~ 168 (224)
..+.+.+++++||+....|.| +...|++||++|++++.+ +++ ...|++||.+++|++..|.+.|.|++++.++.
T Consensus 60 ~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~---~~~--~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l~ 134 (274)
T 1sef_A 60 ATFVDYIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSD---GQE--THELEAGGYAYFTPEMKMYLANAQEADTEVFL 134 (274)
T ss_dssp CSSEEEEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEEC---SSC--EEEEETTEEEEECTTSCCEEEESSSSCEEEEE
T ss_pred CcEEEEEEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEE---CCE--EEEECCCCEEEECCCCCEEEEeCCCCCEEEEE
Confidence 357888999999998766554 456789999999999986 444 68999999999999999999999999998887
Q ss_pred Eee
Q 040384 169 SFN 171 (224)
Q Consensus 169 ~~~ 171 (224)
+..
T Consensus 135 v~~ 137 (274)
T 1sef_A 135 YKK 137 (274)
T ss_dssp EEE
T ss_pred EEe
Confidence 663
No 93
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=98.83 E-value=1.8e-08 Score=80.45 Aligned_cols=71 Identities=18% Similarity=0.160 Sum_probs=57.4
Q ss_pred cEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEEe
Q 040384 91 GISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSF 170 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~ 170 (224)
.+++..+.+. ++ +.|||....|+.||++|++++.+ +|+ ...+++||.++||+|..|.+.|. ++++++.+.
T Consensus 65 ~~s~g~~~~e-~~--~~~~~~~~eE~~yVLeG~~~l~i---~g~--~~~l~~GD~i~iP~G~~h~~~n~--~~a~~l~V~ 134 (151)
T 4axo_A 65 RLGCGMMEMK-ET--TFDWTLNYDEIDYVIDGTLDIII---DGR--KVSASSGELIFIPKGSKIQFSVP--DYARFIYVT 134 (151)
T ss_dssp SCEEEEEEEE-EE--EEEEECSSEEEEEEEEEEEEEEE---TTE--EEEEETTCEEEECTTCEEEEEEE--EEEEEEEEE
T ss_pred cEEEEEEEEc-Cc--cccEeCCCcEEEEEEEeEEEEEE---CCE--EEEEcCCCEEEECCCCEEEEEeC--CCEEEEEEE
Confidence 4666677776 33 35788788999999999999986 455 68999999999999999999997 567776665
Q ss_pred e
Q 040384 171 N 171 (224)
Q Consensus 171 ~ 171 (224)
.
T Consensus 135 ~ 135 (151)
T 4axo_A 135 Y 135 (151)
T ss_dssp E
T ss_pred C
Confidence 4
No 94
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.82 E-value=4.8e-08 Score=84.63 Aligned_cols=77 Identities=12% Similarity=0.181 Sum_probs=67.6
Q ss_pred cccEEEEEEEEeCCcccCc-eecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEE
Q 040384 89 TQGISTNRVDLAVGGINPP-HLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFF 167 (224)
Q Consensus 89 ~~gis~~rv~l~pgg~~~p-H~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~ 167 (224)
..++.+.+++++||+..+. |.|. ..|.+||++|++.+.+ +++ ...+++||++.++++..|+++|.|++++.++
T Consensus 183 ~~d~~~~~~t~~PG~~~p~~e~H~-~eh~~~vL~G~g~y~l---~~~--~~~V~~GD~i~~~~~~~h~~~n~G~e~~~yl 256 (266)
T 4e2q_A 183 AYDFNIHTMDFQPGEFLNVKEVHY-NQHGLLLLEGQGIYRL---GDN--WYPVQAGDVIWMAPFVPQWYAALGKTRSRYL 256 (266)
T ss_dssp TCSEEEEEEEECTTCBCSSCCCCS-CCEEEEEEECEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEEESSSCEEEE
T ss_pred ccceEEEEEEECCCcCcCCceEcc-cceEEEEEeceEEEEE---CCE--EEEecCCCEEEECCCCcEEEEeCCCCCEEEE
Confidence 5578999999999999996 8885 5699999999999886 555 7899999999999999999999999999887
Q ss_pred EEee
Q 040384 168 PSFN 171 (224)
Q Consensus 168 ~~~~ 171 (224)
..-+
T Consensus 257 ~ykd 260 (266)
T 4e2q_A 257 LYKD 260 (266)
T ss_dssp EEEE
T ss_pred EEcc
Confidence 6543
No 95
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=98.78 E-value=2.4e-08 Score=83.87 Aligned_cols=78 Identities=17% Similarity=0.089 Sum_probs=66.3
Q ss_pred ccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEE
Q 040384 88 NTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFF 167 (224)
Q Consensus 88 ~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~ 167 (224)
....+.+..+.+.||...|.|.|+ ..|+.||++|++++.+. +++ ...+++||++++|.|..|++. ++++|+.++
T Consensus 128 ~s~~l~lG~v~l~PG~~yP~HsHp-~EEiy~VLsG~~e~~v~--~g~--~~~l~pGd~v~ipsgv~Ha~r-t~dePllal 201 (217)
T 4b29_A 128 LTQSLRVTVGYWGPGLDYGWHEHL-PEELYSVVSGRALFHLR--NAP--DLMLEPGQTRFHPANAPHAMT-TLTDPILTL 201 (217)
T ss_dssp ECSSCEEEEEEECSSCEEEEEECS-SEEEEEEEEECEEEEET--TSC--CEEECTTCEEEECTTCCEEEE-CCSSCEEEE
T ss_pred CCCeEEEEEEEECCCCcCCCCCCC-CceEEEEEeCCEEEEEC--CCC--EEecCCCCEEEcCCCCceeEE-ECCccEEEE
Confidence 344789999999999999999997 58999999999998872 233 689999999999999999997 588998766
Q ss_pred EEee
Q 040384 168 PSFN 171 (224)
Q Consensus 168 ~~~~ 171 (224)
-+..
T Consensus 202 wvW~ 205 (217)
T 4b29_A 202 VLWR 205 (217)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5553
No 96
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.78 E-value=2.1e-08 Score=84.28 Aligned_cols=74 Identities=12% Similarity=-0.021 Sum_probs=63.5
Q ss_pred cccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEE
Q 040384 89 TQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFP 168 (224)
Q Consensus 89 ~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~ 168 (224)
+-+.++.++.++||...++|.|| ..|++||++|++++.+ +++ +..|++||++++|+|..|.+.|.. ++.++.
T Consensus 34 ~~~~~~~~~~~~~G~~~~~h~h~-~~~~~~Vl~G~~~~~i---~~~--~~~l~~Gd~~~~p~~~~H~~~a~~--~~~~l~ 105 (227)
T 3rns_A 34 QPNSYISLFSLAKDEEITAEAML-GNRYYYCFNGNGEIFI---ENN--KKTISNGDFLEITANHNYSIEARD--NLKLIE 105 (227)
T ss_dssp CSSEEEEEEEECTTCEEEECSCS-SCEEEEEEESEEEEEE---SSC--EEEEETTEEEEECSSCCEEEEESS--SEEEEE
T ss_pred CCCcEEEEEEECCCCccCccccC-CCEEEEEEeCEEEEEE---CCE--EEEECCCCEEEECCCCCEEEEECC--CcEEEE
Confidence 33678999999999999999997 5899999999999987 344 589999999999999999999864 567766
Q ss_pred Ee
Q 040384 169 SF 170 (224)
Q Consensus 169 ~~ 170 (224)
++
T Consensus 106 i~ 107 (227)
T 3rns_A 106 IG 107 (227)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 97
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.76 E-value=2.7e-08 Score=86.19 Aligned_cols=104 Identities=12% Similarity=0.011 Sum_probs=75.0
Q ss_pred CCCccCCCeee-eccCCCcccCCCCceEEEeecccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEE
Q 040384 50 ETEVTSDDFFF-DLSEEGNLSNAFGRAVTEGNVHEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGI 128 (224)
Q Consensus 50 ~~~vt~~df~f-~l~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~ 128 (224)
.+-++.+|++. .+ | .-.|.++...-... + +..+.+..++++|||..+.|.| ...|++||++|++++.+
T Consensus 37 ~avI~~~~iv~s~l--P----g~~~~~~~vL~sP~---~-G~~f~~~lv~l~PGg~s~~~~h-~~EEfiyVleG~l~l~l 105 (266)
T 4e2q_A 37 HALITPESHVYSPL--P----DWTNTLGAYLITPA---T-GSHFVMYLAKMKEMSSSGLPPQ-DIERLIFVVEGAVTLTN 105 (266)
T ss_dssp EEEECGGGCCCEEC--T----TSSSEEEEEEECGG---G-TCSSEEEEEEECSSEECCCCCT-TEEEEEEEEEECEEEEC
T ss_pred eEEECccceEEeeC--C----CCcCEEEEEEcCCC---C-CCcEEEEEEEECcCCcCCCCCC-CCeEEEEEEEEEEEEEE
Confidence 44555566665 22 1 22344444443333 2 2468899999999999888866 68999999999999987
Q ss_pred EeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEEe
Q 040384 129 ITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSF 170 (224)
Q Consensus 129 v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~ 170 (224)
-+ ++ ++.|++||.+++|++..|++.|. ++++++.+.
T Consensus 106 ~~--g~--~~~L~~Gds~y~p~~~~H~~~N~--~~Ar~l~V~ 141 (266)
T 4e2q_A 106 TS--SS--SKKLTVDSYAYLPPNFHHSLDCV--ESATLVVFE 141 (266)
T ss_dssp ----CC--CEEECTTEEEEECTTCCCEEEES--SCEEEEEEE
T ss_pred CC--Cc--EEEEcCCCEEEECCCCCEEEEeC--CCEEEEEEE
Confidence 31 44 58999999999999999999995 567776654
No 98
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.66 E-value=6.7e-08 Score=71.77 Aligned_cols=63 Identities=19% Similarity=0.140 Sum_probs=49.8
Q ss_pred EEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEE
Q 040384 96 RVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVL 165 (224)
Q Consensus 96 rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~ 165 (224)
...+.||.. +.| | ...|++||++|++++.+- +++ ...|++||++++|+|..|.+.|.++....
T Consensus 35 ~~~~~pg~~-~~h-H-~~~E~~~Vl~G~~~~~i~--~g~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~~ 97 (101)
T 1o5u_A 35 IWEKEVSEF-DWY-Y-DTNETCYILEGKVEVTTE--DGK--KYVIEKGDLVTFPKGLRCRWKVLEPVRKH 97 (101)
T ss_dssp EEEECSEEE-EEE-C-SSCEEEEEEEEEEEEEET--TCC--EEEEETTCEEEECTTCEEEEEEEEEEEEE
T ss_pred EEEeCCCcc-ccc-C-CceEEEEEEeCEEEEEEC--CCC--EEEECCCCEEEECCCCcEEEEeCCCeeEE
Confidence 566778764 345 6 578999999999999861 144 68999999999999999999998765443
No 99
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.66 E-value=1.5e-08 Score=82.93 Aligned_cols=66 Identities=15% Similarity=0.190 Sum_probs=53.6
Q ss_pred cCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEEeeC
Q 040384 105 NPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSFNS 172 (224)
Q Consensus 105 ~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~~s 172 (224)
.++|+|+. .|+.||++|+++..+. .+++.+...+++||++++|+|..|+..+..+.....+-+|..
T Consensus 93 ~~~H~H~~-~Ei~~Vl~G~g~~~i~-~~d~~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~ 158 (179)
T 1zrr_A 93 LNEHTHGE-DEVRFFVEGAGLFCLH-IGDEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDN 158 (179)
T ss_dssp HSCBEESS-CEEEEEEESCCCCCEE-CSSCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECC
T ss_pred ccceECCh-heEEEEEcceEEEEEE-eCCEEEEEEECCCCEEEECCCCeEeeecCCCceEEEEEeccC
Confidence 57899976 8999999999998775 356666778999999999999999987765555666666653
No 100
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.60 E-value=8.1e-08 Score=73.86 Aligned_cols=73 Identities=15% Similarity=0.138 Sum_probs=56.9
Q ss_pred cEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEEe
Q 040384 91 GISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSF 170 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~ 170 (224)
.+++....+.||... .|+|. ..|++||++|++++.+ ++++ ...|++||++++|+|..|.+.|.+... .++.++
T Consensus 48 ~~~~g~w~~~pG~~~-~~~~~-~~E~~~Vl~G~~~l~~--~~g~--~~~l~~GD~~~ip~g~~h~~~~~~~~r-K~yv~~ 120 (123)
T 3bcw_A 48 KVESGVWESTSGSFQ-SNTTG-YIEYCHIIEGEARLVD--PDGT--VHAVKAGDAFIMPEGYTGRWEVDRHVK-KIYFVT 120 (123)
T ss_dssp TEEEEEEEEEEEEEE-CCCTT-EEEEEEEEEEEEEEEC--TTCC--EEEEETTCEEEECTTCCCEEEEEEEEE-EEEEEE
T ss_pred CEEEEEEEECCCcee-eEcCC-CcEEEEEEEEEEEEEE--CCCe--EEEECCCCEEEECCCCeEEEEECCcee-EEEEEE
Confidence 578888899998765 46663 2799999999999875 2454 589999999999999999999987544 334343
No 101
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=98.57 E-value=3.5e-07 Score=73.37 Aligned_cols=73 Identities=15% Similarity=0.175 Sum_probs=61.8
Q ss_pred cEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEec--CCccEEEEE
Q 040384 91 GISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNV--GKENVLFFP 168 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~--G~~~a~~~~ 168 (224)
|..+..++++||+..++|+|+. .|.+||++|+... +.++ ..+++||.+..|.|..|...+. +++.++++.
T Consensus 41 g~~v~lvr~~pG~~~p~H~H~g-~ee~~VL~G~~~~---~e~~----~~~~~Gd~~~~P~g~~H~~~~~~~~~e~~~~~~ 112 (159)
T 3ebr_A 41 GETITLLKAPAGMEMPRHHHTG-TVIVYTVQGSWRY---KEHD----WVAHAGSVVYETASTRHTPQSAYAEGPDIITFN 112 (159)
T ss_dssp TEEEEEEEECSSCBCCCEEESS-CEEEEEEESCEEE---TTSS----CCBCTTCEEEECSSEEECEEESSSSSSCEEEEE
T ss_pred CeEEEEEEECCCCCcccccCCC-CEEEEEEEeEEEE---eCCC----eEECCCeEEEECCCCcceeEeCCCCCCCEEEEE
Confidence 5788899999999999999975 7999999999764 2232 4899999999999999999998 778888777
Q ss_pred Eee
Q 040384 169 SFN 171 (224)
Q Consensus 169 ~~~ 171 (224)
+.+
T Consensus 113 ~~~ 115 (159)
T 3ebr_A 113 IVA 115 (159)
T ss_dssp EEE
T ss_pred Eec
Confidence 554
No 102
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=98.57 E-value=3.7e-07 Score=74.40 Aligned_cols=81 Identities=20% Similarity=0.244 Sum_probs=63.6
Q ss_pred cEEEEEEEEeCCcccCceecCC------CCceEEEEeCeEEEEEEeCCCeE------------------EEEEECCCCEE
Q 040384 91 GISTNRVDLAVGGINPPHLHPR------SSESSIVIRGTVLVGIITTDNVF------------------YSKVVTAGMLF 146 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~------a~Ei~yVl~G~~~v~~v~~~~~~------------------~~~~l~~GDv~ 146 (224)
....-++.+.||...|.|+|+. -.|-++|+.|++++.+ .+++. ....|++||.+
T Consensus 52 ~Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~--~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesv 129 (175)
T 2y0o_A 52 RYCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYV--EGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQY 129 (175)
T ss_dssp SEEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEE--SSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEE
T ss_pred CceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEE--CCccccCcceeccCCceeeecCCcEEEECCCCEE
Confidence 3777889999999999999998 8899999999988876 22221 24699999999
Q ss_pred EecCCCeeEEEecCCccEEEEEEeeCCCC
Q 040384 147 LIPRGLVHFQLNVGKENVLFFPSFNSQLP 175 (224)
Q Consensus 147 vvP~G~~H~~~N~G~~~a~~~~~~~s~~p 175 (224)
.+|+|..|+++| |.+. .++.-+++.+-
T Consensus 130 tIppg~~H~f~a-geeg-vli~EvSt~~d 156 (175)
T 2y0o_A 130 TIPPNTKHWFQA-GEEG-AVVTEMSSTST 156 (175)
T ss_dssp EECTTCCEEEEE-EEEE-EEEEEEEECCC
T ss_pred EECCCCcEEEEe-CCCC-EEEEEEeCCCC
Confidence 999999999998 3333 45555554443
No 103
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=98.53 E-value=2.7e-07 Score=76.22 Aligned_cols=71 Identities=15% Similarity=0.176 Sum_probs=60.3
Q ss_pred cEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEEe
Q 040384 91 GISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSF 170 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~ 170 (224)
+..+..+.++||+..+.|+|+ ..|+.||++|+.. +.. ..+++||.+++|.|..|...+.+++.+++++++
T Consensus 124 ~~~v~l~~~~pG~~~p~H~H~-g~E~~~VL~G~f~----de~-----~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~~~ 193 (195)
T 2q1z_B 124 EAIARLLWIPGGQAVPDHGHR-GLELTLVLQGAFR----DET-----DRFGAGDIEIADQELEHTPVAERGLDCICLAAT 193 (195)
T ss_dssp SSEEEEEEECTTCBCCCCCCS-SCEEEEEEESEEE----CSS-----SEEETTCEEEECSSCCCCCEECSSSCEEEEEEE
T ss_pred CcEEEEEEECCCCCCCCcCCC-CeEEEEEEEEEEE----CCc-----EEECCCeEEEeCcCCccCCEeCCCCCEEEEEEe
Confidence 346678999999999999995 6799999999954 322 579999999999999999988777888888876
Q ss_pred e
Q 040384 171 N 171 (224)
Q Consensus 171 ~ 171 (224)
+
T Consensus 194 d 194 (195)
T 2q1z_B 194 D 194 (195)
T ss_dssp C
T ss_pred c
Confidence 5
No 104
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.52 E-value=2.5e-07 Score=78.72 Aligned_cols=71 Identities=11% Similarity=0.121 Sum_probs=60.0
Q ss_pred ccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEE
Q 040384 90 QGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPS 169 (224)
Q Consensus 90 ~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~ 169 (224)
..+.+.+++++||+....|+ ..|++||++|++++.+ +++ ...|++||.+++|++..|.+.|. +++.++.+
T Consensus 48 ~~~~~~~~~l~Pg~~~~~~~---~ee~~~Vl~G~~~~~~---~~~--~~~l~~Gd~~~~p~~~~H~~~n~--~~~~~l~v 117 (246)
T 1sfn_A 48 ARFVQFTAEMPAGAQATESV---YQRFAFVLSGEVDVAV---GGE--TRTLREYDYVYLPAGEKHMLTAK--TDARVSVF 117 (246)
T ss_dssp CSSEEEEEEECTTCEEECCS---SEEEEEEEEEEEEEEC---SSC--EEEECTTEEEEECTTCCCEEEEE--EEEEEEEE
T ss_pred CcEEEEEEEECCCCcCCCCc---eeEEEEEEECEEEEEE---CCE--EEEECCCCEEEECCCCCEEEEeC--CCEEEEEE
Confidence 35788899999999887774 6799999999999986 344 68999999999999999999998 56766655
Q ss_pred e
Q 040384 170 F 170 (224)
Q Consensus 170 ~ 170 (224)
.
T Consensus 118 ~ 118 (246)
T 1sfn_A 118 E 118 (246)
T ss_dssp E
T ss_pred E
Confidence 4
No 105
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.51 E-value=6.6e-07 Score=79.99 Aligned_cols=80 Identities=14% Similarity=0.145 Sum_probs=63.7
Q ss_pred CCCccccEEEEEEEEeC---CcccCceecCCCCceEEEEeCeEEEEEEeCCC-eEEEEEECCCCEEEecCCCeeEEEecC
Q 040384 85 PGVNTQGISTNRVDLAV---GGINPPHLHPRSSESSIVIRGTVLVGIITTDN-VFYSKVVTAGMLFLIPRGLVHFQLNVG 160 (224)
Q Consensus 85 P~l~~~gis~~rv~l~p---gg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~-~~~~~~l~~GDv~vvP~G~~H~~~N~G 160 (224)
+..+...+++.++++.+ |+..+.|.|+ ..|++||++|++++.+ +| + ...|++||++++|+|..|.+.|.+
T Consensus 242 ~~~~~~~f~~~~i~~~~~~~g~~~~~h~~~-~~~~~~vleG~~~i~i---~g~~--~~~l~~Gd~~~iPag~~h~~~~~~ 315 (350)
T 1juh_A 242 TQAQDTNYTLSTISMSTTPSTVTVPTWSFP-GACAFQVQEGRVVVQI---GDYA--ATELGSGDVAFIPGGVEFKYYSEA 315 (350)
T ss_dssp HHHGGGCEEEEEEEECCCCTTSCCCCBCCS-SCEEEEEEESCEEEEE---TTSC--CEEECTTCEEEECTTCCEEEEESS
T ss_pred CcCceeEEEEEEEeeccccCCCCCCcccCC-CcEEEEEEeeEEEEEE---CCeE--EEEeCCCCEEEECCCCCEEEEecC
Confidence 34454468898999988 4577788885 6899999999999998 34 4 589999999999999999999986
Q ss_pred CccEEEEEEee
Q 040384 161 KENVLFFPSFN 171 (224)
Q Consensus 161 ~~~a~~~~~~~ 171 (224)
+. ..++.+.+
T Consensus 316 ~~-~~~l~~~~ 325 (350)
T 1juh_A 316 YF-SKVLFVSS 325 (350)
T ss_dssp SS-EEEEEEEE
T ss_pred Ce-EEEEEEec
Confidence 54 55555554
No 106
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=98.50 E-value=4.5e-07 Score=80.11 Aligned_cols=84 Identities=19% Similarity=0.229 Sum_probs=65.9
Q ss_pred EEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCC-CeEEEEEECC-C---CEEEecCCCeeEEEecCCccEEEE
Q 040384 93 STNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTD-NVFYSKVVTA-G---MLFLIPRGLVHFQLNVGKENVLFF 167 (224)
Q Consensus 93 s~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~-~~~~~~~l~~-G---Dv~vvP~G~~H~~~N~G~~~a~~~ 167 (224)
.....+..||.....|||.+..|.++|++|++++.+-++. ++. ..++. | |++.+|+|..|.+.|.|+++++++
T Consensus 273 q~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~~ 350 (369)
T 3st7_A 273 QVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEI--IEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTI 350 (369)
T ss_dssp EEEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETTCCCC--EEEEEETTBCCEEEECTTEEEEEEECSSSCEEEE
T ss_pred eEEEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCCCCcE--EEEEecCCcceEEEeCCCceEEeEEcCCCcEEEE
Confidence 3445678999999999999999999999999998776543 443 44444 6 999999999999999998888877
Q ss_pred EE----eeCCCCcce
Q 040384 168 PS----FNSQLPGTQ 178 (224)
Q Consensus 168 ~~----~~s~~pg~~ 178 (224)
.. |+.++|..+
T Consensus 351 ~~~~~~y~~~~~d~~ 365 (369)
T 3st7_A 351 MWVNEMFDPNQPDTY 365 (369)
T ss_dssp EEESSCCCSSSCCCE
T ss_pred EecCcccCCCCCccc
Confidence 64 344455544
No 107
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=98.49 E-value=1.7e-06 Score=70.25 Aligned_cols=85 Identities=19% Similarity=0.266 Sum_probs=71.6
Q ss_pred cEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeC-CCe---EEEEEECCCCEEEecCCCeeEEEecCCccEEE
Q 040384 91 GISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITT-DNV---FYSKVVTAGMLFLIPRGLVHFQLNVGKENVLF 166 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~-~~~---~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~ 166 (224)
++++..+...||...++|-|.++..+++|++|+++..+... +++ .....+++||++++|++.+|.+.|.++++++-
T Consensus 68 ~~~v~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~~~aVS 147 (171)
T 3eqe_A 68 ELEIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPTSERMVS 147 (171)
T ss_dssp SCEEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEECCSSSCEEE
T ss_pred CeEEEEEEECCCCCcccccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEECCCCCCEEE
Confidence 56888999999999999999888899999999999876532 232 23578999999999999999999999999988
Q ss_pred EEEeeCCCC
Q 040384 167 FPSFNSQLP 175 (224)
Q Consensus 167 ~~~~~s~~p 175 (224)
+-++..+..
T Consensus 148 lHvY~pp~~ 156 (171)
T 3eqe_A 148 LHVYSPPLE 156 (171)
T ss_dssp EEEEESCCC
T ss_pred EEEeCCCcc
Confidence 888875543
No 108
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.43 E-value=1.5e-06 Score=78.41 Aligned_cols=89 Identities=15% Similarity=0.083 Sum_probs=69.8
Q ss_pred Cce-EEEeecc-cCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecC
Q 040384 73 GRA-VTEGNVH-EFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPR 150 (224)
Q Consensus 73 g~~-~~~~~~~-~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~ 150 (224)
|.. +..++.. .-+.++ -|++....|.||....+|-|. ++++++|++|++++.+ +++ +...++||+|++|.
T Consensus 260 g~~~~~y~NP~tg~~~~p--ti~~~~~~L~pG~~t~~hRht-~s~Vy~V~eG~G~~~I---~~~--~~~w~~gD~fvvP~ 331 (368)
T 3nw4_A 260 GHAAIRYVNPTTGGDVMP--TLRCEFHRLRAGTETATRNEV-GSTVFQVFEGAGAVVM---NGE--TTKLEKGDMFVVPS 331 (368)
T ss_dssp TEEEEECBCTTTSSBSSS--SCEEEEEEECTTCBCCCEEES-SCEEEEEEESCEEEEE---TTE--EEEECTTCEEEECT
T ss_pred ceEEEEEeCCCCCCCcch--hHHhheEEECCCCccCCeecc-ccEEEEEEeCcEEEEE---CCE--EEEecCCCEEEECC
Confidence 555 5556643 334455 456777789999999999995 5799999999999987 454 68999999999999
Q ss_pred CCeeEEEecCCccEEEEEEee
Q 040384 151 GLVHFQLNVGKENVLFFPSFN 171 (224)
Q Consensus 151 G~~H~~~N~G~~~a~~~~~~~ 171 (224)
+..|...|. +++.++.+-|
T Consensus 332 w~~h~~~n~--~~a~Lf~~~D 350 (368)
T 3nw4_A 332 WVPWSLQAE--TQFDLFRFSD 350 (368)
T ss_dssp TCCEEEEES--SSEEEEEEES
T ss_pred CCcEEEEeC--CCEEEEEEeC
Confidence 999999996 4677765543
No 109
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.42 E-value=2e-06 Score=69.65 Aligned_cols=60 Identities=17% Similarity=0.118 Sum_probs=51.3
Q ss_pred EeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecC
Q 040384 99 LAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVG 160 (224)
Q Consensus 99 l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G 160 (224)
-.||+-...|.| ...|++||++|++++.+.+ +|+.....|++||++++|+|..|+-...+
T Consensus 42 ~Gpn~r~d~H~h-~~dE~FyvlkG~m~i~v~d-~g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 42 GGPNHRTDYHDD-PLEEFFYQLRGNAYLNLWV-DGRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp CSCBCCCCEEEC-SSCEEEEEEESCEEEEEEE-TTEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred cCCCcCccCcCC-CCceEEEEEeeEEEEEEEc-CCceeeEEECCCCEEEeCCCCCcCccccC
Confidence 356777889988 5799999999999999987 45566799999999999999999986554
No 110
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.41 E-value=1.1e-06 Score=68.90 Aligned_cols=67 Identities=12% Similarity=0.252 Sum_probs=52.5
Q ss_pred CCcccCceecCCCCceEEEEeCeEEEEEEeCC-C--eEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEE
Q 040384 101 VGGINPPHLHPRSSESSIVIRGTVLVGIITTD-N--VFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPS 169 (224)
Q Consensus 101 pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~-~--~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~ 169 (224)
++++...|.|++..|+++|++|++++.+-+.. + +.....|++|++++||+|..|.-.... .+.++.+
T Consensus 38 ~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~~--e~~vLLi 107 (140)
T 3d0j_A 38 IEGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQK--DTKMMYV 107 (140)
T ss_dssp TTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEECT--TCEEEEE
T ss_pred cccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCCC--ceEEEEE
Confidence 35677899999999999999999999987421 1 234689999999999999999987644 3444433
No 111
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=98.38 E-value=3.7e-07 Score=71.80 Aligned_cols=77 Identities=18% Similarity=0.074 Sum_probs=58.5
Q ss_pred cEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeE-EEEEECCCCEEEecCCCeeE-EEecCCccEEEEE
Q 040384 91 GISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVF-YSKVVTAGMLFLIPRGLVHF-QLNVGKENVLFFP 168 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~-~~~~l~~GDv~vvP~G~~H~-~~N~G~~~a~~~~ 168 (224)
|-.+.+++++||+..++|+|+. .|.+||++|+++.. ++.. ....+++||.+++|.|..|. ..+ .+.++++.
T Consensus 43 g~~~~~~~~~pG~~~p~H~H~~-~ee~~VL~G~~~~~----~g~~~~~~~~~~Gd~~~~p~g~~H~p~~~--~e~~~~l~ 115 (145)
T 2o1q_A 43 GSWTAIFDCPAGSSFAAHVHVG-PGEYFLTKGKMDVR----GGKAAGGDTAIAPGYGYESANARHDKTEF--PVASEFYM 115 (145)
T ss_dssp TEEEEEEEECTTEEECCEEESS-CEEEEEEEEEEEET----TCGGGTSEEEESSEEEEECTTCEESCCEE--EEEEEEEE
T ss_pred ccEEEEEEECCCCCCCccCCCC-CEEEEEEEeEEEEc----CCCEecceEeCCCEEEEECcCCccCCeEC--CCCeEEEE
Confidence 3467789999999999999975 67799999998743 3321 12789999999999999999 543 34466676
Q ss_pred EeeCCC
Q 040384 169 SFNSQL 174 (224)
Q Consensus 169 ~~~s~~ 174 (224)
+++...
T Consensus 116 ~~~gp~ 121 (145)
T 2o1q_A 116 SFLGPL 121 (145)
T ss_dssp EEESCE
T ss_pred EECCcc
Confidence 766443
No 112
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=98.34 E-value=1.3e-06 Score=70.43 Aligned_cols=74 Identities=20% Similarity=0.218 Sum_probs=58.7
Q ss_pred cEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecC--CccEEEEE
Q 040384 91 GISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVG--KENVLFFP 168 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G--~~~a~~~~ 168 (224)
|..+..+.++||+..++|+|+. .|.+||++|+...+ ++. ...+++||.+..|.|..|...+.. +++++.+.
T Consensus 42 g~~v~lvr~~pG~~~p~H~H~g-~ee~~VL~G~f~~~----~~~--~~~~~aGd~~~~P~g~~H~~~a~~~~~~gci~l~ 114 (165)
T 3cjx_A 42 GLMVMRASFAPGLTLPLHFHTG-TVHMYTISGCWYYT----EYP--GQKQTAGCYLYEPGGSIHQFNTPRDNEGQTEVIF 114 (165)
T ss_dssp TEEEEEEEECTTCBCCEEEESS-CEEEEEEESEEEET----TCT--TSCEETTEEEEECTTCEECEECCTTCSSCEEEEE
T ss_pred CcEEEEEEECCCCcCCcccCCC-CEEEEEEEEEEEEC----CCc--eEEECCCeEEEeCCCCceeeEeCCCCCCCcEEEE
Confidence 5678899999999999999974 79999999998752 220 257899999999999999998864 33675555
Q ss_pred Eee
Q 040384 169 SFN 171 (224)
Q Consensus 169 ~~~ 171 (224)
+.+
T Consensus 115 v~~ 117 (165)
T 3cjx_A 115 MLS 117 (165)
T ss_dssp EEE
T ss_pred EEe
Confidence 444
No 113
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=98.33 E-value=5.3e-06 Score=69.23 Aligned_cols=81 Identities=14% Similarity=0.069 Sum_probs=67.6
Q ss_pred cEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEe--CCCeE----EEEEECCCCEEEecC--CCeeEEEec-CC
Q 040384 91 GISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIIT--TDNVF----YSKVVTAGMLFLIPR--GLVHFQLNV-GK 161 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~--~~~~~----~~~~l~~GDv~vvP~--G~~H~~~N~-G~ 161 (224)
.+++..+...||...++|-|.. ..+++|++|+++..+.. .+|+. ...++++||++.++. |.+|.+.|. ++
T Consensus 78 ~~~v~~l~w~PGq~spiHdH~~-~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~ 156 (208)
T 2gm6_A 78 RFSIVSFVWGPGQRTPIHDHTV-WGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDD 156 (208)
T ss_dssp SCEEEEEEECTTCBCCSBCCSS-CEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEeCCCcccCcccCCc-ceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCC
Confidence 4688889999999999999976 89999999999887653 23322 157999999999999 999999999 68
Q ss_pred ccEEEEEEeeC
Q 040384 162 ENVLFFPSFNS 172 (224)
Q Consensus 162 ~~a~~~~~~~s 172 (224)
++++.+-++..
T Consensus 157 ~~avsLHvY~~ 167 (208)
T 2gm6_A 157 RVSISIHVYGA 167 (208)
T ss_dssp SCEEEEEEESS
T ss_pred CcEEEEEEEcC
Confidence 88888877753
No 114
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.21 E-value=8.3e-06 Score=66.06 Aligned_cols=59 Identities=15% Similarity=0.319 Sum_probs=48.9
Q ss_pred eCCcccCceecCCCCceEEEEeCeEEEEEEeCCC----eEEEEEECCCCEEEecCCCeeEEEecC
Q 040384 100 AVGGINPPHLHPRSSESSIVIRGTVLVGIITTDN----VFYSKVVTAGMLFLIPRGLVHFQLNVG 160 (224)
Q Consensus 100 ~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~----~~~~~~l~~GDv~vvP~G~~H~~~N~G 160 (224)
.|+.-.-.|.| ...|++|+++|+..+.+.+. | +.....|++||++++|+|..|+-....
T Consensus 42 GPn~r~D~H~~-~~eE~Fy~lkG~m~l~v~d~-g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~~ 104 (176)
T 1zvf_A 42 GPNERTDYHIN-PTPEWFYQKKGSMLLKVVDE-TDAEPKFIDIIINEGDSYLLPGNVPHSPVRFA 104 (176)
T ss_dssp SSBCCSCEEEC-SSCEEEEEEESCEEEEEEEC-SSSSCEEEEEEECTTEEEEECTTCCEEEEECT
T ss_pred CCCcCCcCcCC-CCceEEEEEeCEEEEEEEcC-CCcccceeeEEECCCCEEEcCCCCCcCCcccC
Confidence 34566778955 57899999999999999883 4 566899999999999999999985543
No 115
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.18 E-value=1.1e-05 Score=62.51 Aligned_cols=60 Identities=20% Similarity=0.205 Sum_probs=47.4
Q ss_pred CceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCC-ccEEEE-EEee
Q 040384 106 PPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGK-ENVLFF-PSFN 171 (224)
Q Consensus 106 ~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~-~~a~~~-~~~~ 171 (224)
.||.| +.-|++||++|++++.+ +++ .+.+++||++++|+|..|...+.++ ++...+ ..|+
T Consensus 32 ~p~~h-~~~~i~~v~~G~~~~~i---~~~--~~~l~~Gd~~~i~p~~~H~~~~~~~~~~~~~~~i~f~ 93 (164)
T 2arc_A 32 RPLGM-KGYILNLTIRGQGVVKN---QGR--EFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFR 93 (164)
T ss_dssp ETTCC-SSEEEEEEEEECEEEEE---TTE--EEEECTTCEEEECTTCCEEEEECTTSSEEEEEEEEEC
T ss_pred cccCC-CceEEEEEEEeEEEEEE---CCE--EEEecCCeEEEEcCCCCEEEEeCCCCCcEEEEEEEEC
Confidence 48889 46799999999999886 455 6899999999999999999888663 544433 3443
No 116
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.14 E-value=1.3e-05 Score=69.41 Aligned_cols=56 Identities=16% Similarity=0.294 Sum_probs=48.7
Q ss_pred ccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCC
Q 040384 104 INPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGK 161 (224)
Q Consensus 104 ~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~ 161 (224)
-...| |....|++|+++|..++.+.+ +|+.....+++||++++|+|..|.=....+
T Consensus 43 R~d~H-~~~~dE~FyqlkG~m~l~~~d-~g~~~~V~i~eGemfllP~gv~HsP~r~~e 98 (286)
T 2qnk_A 43 RKDYH-IEEGEEVFYQLEGDMVLRVLE-QGKHRDVVIRQGEIFLLPARVPHSPQRFAN 98 (286)
T ss_dssp CCCEE-ECSSCEEEEEEESCEEEEEEE-TTEEEEEEECTTEEEEECTTCCEEEEECTT
T ss_pred CccCc-CCCCCeEEEEEeCeEEEEEEe-CCceeeEEECCCeEEEeCCCCCcCCcccCC
Confidence 36788 888999999999999999987 466678999999999999999999866443
No 117
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=98.12 E-value=4.8e-05 Score=63.06 Aligned_cols=85 Identities=12% Similarity=0.024 Sum_probs=69.6
Q ss_pred cEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeC--CC-----eEEEEEECCCCEEEe-cCCCeeEEEecC-C
Q 040384 91 GISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITT--DN-----VFYSKVVTAGMLFLI-PRGLVHFQLNVG-K 161 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~--~~-----~~~~~~l~~GDv~vv-P~G~~H~~~N~G-~ 161 (224)
.+++..+...||...++|-|.++..+++|++|+++..+.+- ++ .....++++||+..+ |++.+|.+.|.+ +
T Consensus 69 ~~~l~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~ 148 (200)
T 3eln_A 69 KFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHT 148 (200)
T ss_dssp TCEEEEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSS
T ss_pred ceEEEEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCC
Confidence 47888899999999999999878999999999999886542 11 123689999999999 888899999998 6
Q ss_pred ccEEEEEEeeCCCC
Q 040384 162 ENVLFFPSFNSQLP 175 (224)
Q Consensus 162 ~~a~~~~~~~s~~p 175 (224)
++++-+=++..+..
T Consensus 149 ~~avSlHvY~pp~~ 162 (200)
T 3eln_A 149 EPAVSLHLYSPPFD 162 (200)
T ss_dssp CCEEEEEEEESCCS
T ss_pred CCEEEEEeCCCCcc
Confidence 78877766665544
No 118
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=98.07 E-value=4.3e-06 Score=66.70 Aligned_cols=77 Identities=14% Similarity=0.044 Sum_probs=58.6
Q ss_pred CCCceEEEeecccCCCCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCe-EEEEEECCCCEEEec
Q 040384 71 AFGRAVTEGNVHEFPGVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNV-FYSKVVTAGMLFLIP 149 (224)
Q Consensus 71 ~~g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~-~~~~~l~~GDv~vvP 149 (224)
..|..+..+.. -| ..|-...+++++||+..++|+|+. .|.+|||+|+...+ +|. .....+++|+.+..|
T Consensus 30 ~~Gv~~k~L~~--~~---e~g~~t~lvr~~pG~~~p~H~H~g-~ee~~VL~G~~~~~----~Gd~~~~~~~~aGsYv~eP 99 (153)
T 3bal_A 30 DGGITWQLLHS--SP---ETSSWTAIFNCPAGSSFASHIHAG-PGEYFLTKGKMEVR----GGEQEGGSTAYAPSYGFES 99 (153)
T ss_dssp ESCCEEEEEEE--ET---TTTEEEEEEEECTTEEECCEEESS-CEEEEEEESEEEET----TCGGGTSEEEESSEEEEEC
T ss_pred CCCeEEEEEEE--CC---ccceEEEEEEeCCCCCccCccCCC-CEEEEEEEEEEEec----CccccCccccCCCeEEEcC
Confidence 34555655522 23 247889999999999999999975 78899999998764 222 114688999999999
Q ss_pred CCCeeEEE
Q 040384 150 RGLVHFQL 157 (224)
Q Consensus 150 ~G~~H~~~ 157 (224)
+|..|+..
T Consensus 100 pGs~H~p~ 107 (153)
T 3bal_A 100 SGALHGKT 107 (153)
T ss_dssp TTCEESCC
T ss_pred CCCcccce
Confidence 99999843
No 119
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=98.04 E-value=2.4e-05 Score=65.94 Aligned_cols=69 Identities=23% Similarity=0.213 Sum_probs=57.4
Q ss_pred cEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEEe
Q 040384 91 GISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSF 170 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~ 170 (224)
+..+..+.++||+..++|+|+ ..|.+||++|+.. +. ...+.+||.+..|.|..|.... ++.+++++.+
T Consensus 42 g~~~~lvr~~pG~~~p~H~H~-g~Ee~~VL~G~f~----d~-----~~~~~~Gd~~~~P~g~~H~p~a--~~gc~~~vk~ 109 (223)
T 3o14_A 42 ARATSIVRYAPGSRFSAHTHD-GGEEFIVLDGVFQ----DE-----HGDYPAGTYVRNPPTTSHVPGS--AEGCTIFVKL 109 (223)
T ss_dssp CEEEEEEEECTTEECCCEECT-TCEEEEEEEEEEE----ET-----TEEEETTEEEEECTTCEECCEE--SSCEEEEEEE
T ss_pred ccEEEEEEECCCCCcccccCC-CCEEEEEEEeEEE----EC-----CeEECCCeEEEeCCCCccccEe--CCCCEEEEEe
Confidence 556778999999999999996 5799999999965 32 2589999999999999999775 4567877776
Q ss_pred e
Q 040384 171 N 171 (224)
Q Consensus 171 ~ 171 (224)
.
T Consensus 110 ~ 110 (223)
T 3o14_A 110 W 110 (223)
T ss_dssp S
T ss_pred c
Confidence 4
No 120
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=97.82 E-value=0.00052 Score=55.45 Aligned_cols=132 Identities=18% Similarity=0.160 Sum_probs=89.2
Q ss_pred CCCCceEEEeecccCC-CCccccEEEEEEEEeCCcccCceecCCCCceEEEEeCe-EEEEEEeCCCeEEEEE----ECCC
Q 040384 70 NAFGRAVTEGNVHEFP-GVNTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGT-VLVGIITTDNVFYSKV----VTAG 143 (224)
Q Consensus 70 ~~~g~~~~~~~~~~~P-~l~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~-~~v~~v~~~~~~~~~~----l~~G 143 (224)
.+.||..++.....-+ .-.....+....-|.+|....+|.. ++.|+.|...|. +++.+++++++..+.+ +.+|
T Consensus 26 HPEGG~yret~rs~~~~~~~R~~~T~IYfLL~~g~~S~~HRv-~sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG~dv~~G 104 (170)
T 1yud_A 26 HVEGGFYRSSYRSETAFDPSRQLWSSIYFLLRTGEVSHFHRL-TADEMWYFHAGQSLTIYMISPEGELTTAQLGLDLAAG 104 (170)
T ss_dssp CTTSSEEEEEEECSSBSSSSSBSCEEEEEEEETTCCEEEEEC-SSCEEEEEEEESCEEEEEECTTSCEEEEEESSCTTTT
T ss_pred CCCCceEEEeecCCCCCCCCCccceEEEEEECCCCCCeeEEc-CCCEEEEEEcCCCEEEEEEcCCCCEEEEEeCCCcccC
Confidence 5688989888866411 1122235777888999998777777 689999999998 4888888888765554 5789
Q ss_pred CE--EEecCCCeeEEEecCCccEEEEEEeeCCCCcceehhhhhhcCCCCCCHHHHHhhcCCCHHHHHHHH
Q 040384 144 ML--FLIPRGLVHFQLNVGKENVLFFPSFNSQLPGTQFVHSSLFNTTPPIPNEVLTKTFLVGDEVINAIK 211 (224)
Q Consensus 144 Dv--~vvP~G~~H~~~N~G~~~a~~~~~~~s~~pg~~~~~~~lf~~~p~~p~evla~af~v~~~~v~~l~ 211 (224)
|. ++||+|.++...+.+.+-+.+-+.. .||+..-...+ .+.+-|.+.|---.+.|++|.
T Consensus 105 e~pQ~vVP~G~wqaa~~~~g~~~LV~C~V---aPGF~f~dfel------~~~~~L~~~~P~~~~~I~~lt 165 (170)
T 1yud_A 105 ERPQFLVPKGCIFGSAMNQDGFSLVGCMV---SPGFTFDDFEL------FSQEALLAMYPQHKAVVQKLS 165 (170)
T ss_dssp EESCEEECTTCEEEEEESSSSEEEEEEEE---SSCCCGGGCCB------CBHHHHHHSCCTTHHHHTTSC
T ss_pred ceeEEEECCCCEEEEEECCCCcEEEEEEE---CCCccCCceEE------cCHHHHHhHCchhHHHHHHhh
Confidence 99 9999999999988722333333332 35554332222 345566666666666666654
No 121
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=97.79 E-value=0.00048 Score=53.98 Aligned_cols=94 Identities=9% Similarity=0.034 Sum_probs=65.2
Q ss_pred CCceEEEeec-ccCCCCccccEEEEE-EEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCC-EEEe
Q 040384 72 FGRAVTEGNV-HEFPGVNTQGISTNR-VDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGM-LFLI 148 (224)
Q Consensus 72 ~g~~~~~~~~-~~~P~l~~~gis~~r-v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GD-v~vv 148 (224)
..|.++.+.. .+.|- .- -.+.. ...+||....+|.|....|++++++|+..+-+-+ +....+..|.+.. .+.|
T Consensus 16 ~RG~L~~~e~~~~ipf-~i--kRvy~~~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldD-g~~~~~~~L~~~~~gL~I 91 (141)
T 2pa7_A 16 SRGSLVAIEENKNIPF-SI--KRVYYIFDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDD-GNIIQEITLDSPAVGLYV 91 (141)
T ss_dssp TTEEEEEEETTTTSSS-CC--CEEEEEESCCSSCCEEEEEESSCCEEEEEEESCEEEEEEC-SSCEEEEEECCTTEEEEE
T ss_pred CCCcEEEEeccCCCCC-Cc--cEEEEEEecCCCCEECcCcCCCceEEEEEEccEEEEEEEC-CcEEEEEEECCCCcEEEe
Confidence 4566777766 33333 21 12222 3345888999999999999999999999998843 2233456675554 5899
Q ss_pred cCCCeeEEEecCCccEEEEEEe
Q 040384 149 PRGLVHFQLNVGKENVLFFPSF 170 (224)
Q Consensus 149 P~G~~H~~~N~G~~~a~~~~~~ 170 (224)
|+|.+|.+.+.++. ++++.+-
T Consensus 92 ppgvWh~~~~~s~~-avllvla 112 (141)
T 2pa7_A 92 GPAVWHEMHDFSSD-CVMMVLA 112 (141)
T ss_dssp CTTCEEEEECCCTT-CEEEEEE
T ss_pred CCCEEEEEEEcCCC-eEEEEEC
Confidence 99999999998775 6655443
No 122
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=97.77 E-value=0.00027 Score=57.33 Aligned_cols=73 Identities=12% Similarity=0.009 Sum_probs=60.2
Q ss_pred EeCCcccCceecCCCCceEEEEeCeEEEEEEeCC------CeEEEEEEC---CCCEEEecCCCeeEEEecCCccEEEEEE
Q 040384 99 LAVGGINPPHLHPRSSESSIVIRGTVLVGIITTD------NVFYSKVVT---AGMLFLIPRGLVHFQLNVGKENVLFFPS 169 (224)
Q Consensus 99 l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~------~~~~~~~l~---~GDv~vvP~G~~H~~~N~G~~~a~~~~~ 169 (224)
..+|-++..|+|..-.++++|++|++..-++|-. |+.....|. ....+.||+|++|-+.|.++++++++..
T Consensus 60 s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~~av~ly~ 139 (174)
T 3ejk_A 60 VLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALVANC 139 (174)
T ss_dssp ECBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTSCEEEEEE
T ss_pred CCCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccCCCEEEEEE
Confidence 4788899999998888999999999999988743 456777887 6689999999999999998866766544
Q ss_pred ee
Q 040384 170 FN 171 (224)
Q Consensus 170 ~~ 171 (224)
-+
T Consensus 140 ~s 141 (174)
T 3ejk_A 140 TD 141 (174)
T ss_dssp ES
T ss_pred CC
Confidence 43
No 123
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.71 E-value=0.00018 Score=61.12 Aligned_cols=72 Identities=19% Similarity=0.164 Sum_probs=54.6
Q ss_pred cEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEEe
Q 040384 91 GISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSF 170 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~ 170 (224)
++++..+.+ .|...... +| .+|++||++|++++.. +|+ ..++++||+++||+|..|.+...+... .++..+
T Consensus 46 ~~~~G~~~~-~g~~~v~~-~p-~dE~~~VleG~~~lt~---~g~--~~~~~~Gd~~~ip~G~~~~w~~~~~~~-~~y~~~ 116 (238)
T 3myx_A 46 GIAAGIVEF-GTALSVEA-YP-YTEMLVMHRGSVTLTS---GTD--SVTLSTGESAVIGRGTQVRIDAQPESL-WAFCAS 116 (238)
T ss_dssp SEEEEEEEE-CSEEEESS-CS-SEEEEEEEESEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEECTTEE-EEEEEE
T ss_pred CeEEEEEEe-cccccccc-CC-CcEEEEEEEeEEEEEC---CCe--EEEEcCCCEEEECCCCEEEEEecCCeE-EEEEec
Confidence 678888888 55544322 22 3799999999999885 455 688999999999999999998776543 345566
Q ss_pred e
Q 040384 171 N 171 (224)
Q Consensus 171 ~ 171 (224)
.
T Consensus 117 ~ 117 (238)
T 3myx_A 117 T 117 (238)
T ss_dssp C
T ss_pred c
Confidence 6
No 124
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=97.69 E-value=0.00065 Score=56.71 Aligned_cols=82 Identities=15% Similarity=0.071 Sum_probs=65.9
Q ss_pred cEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEe--CCCeEE----EEEECCCCEEEecCC--CeeEEEecC-C
Q 040384 91 GISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIIT--TDNVFY----SKVVTAGMLFLIPRG--LVHFQLNVG-K 161 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~--~~~~~~----~~~l~~GDv~vvP~G--~~H~~~N~G-~ 161 (224)
.+++..+...||...++|=|. +..++.|++|+.+..+.. ++++.. ...+++||+.+++.+ .+|.+.|.+ +
T Consensus 72 ~f~v~~l~W~PGq~spiHDH~-swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d 150 (211)
T 3uss_A 72 RFSVVSFVWGPGQITPVHDHR-VWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSD 150 (211)
T ss_dssp SCEEEEEEECTTCBCCSBCCS-SCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEECCCCcCCCCCCC-eeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccCCCC
Confidence 467888999999999999997 899999999999877643 234322 378999999999987 899999984 7
Q ss_pred ccEEEEEEeeCC
Q 040384 162 ENVLFFPSFNSQ 173 (224)
Q Consensus 162 ~~a~~~~~~~s~ 173 (224)
++++-+=++...
T Consensus 151 ~~avSLHvYg~p 162 (211)
T 3uss_A 151 RTSISIHVYGAN 162 (211)
T ss_dssp SCEEEEEEESSC
T ss_pred CCEEEEEEcCCC
Confidence 778766666533
No 125
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.59 E-value=0.00025 Score=53.88 Aligned_cols=63 Identities=16% Similarity=0.081 Sum_probs=47.5
Q ss_pred EEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecC
Q 040384 92 ISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVG 160 (224)
Q Consensus 92 is~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G 160 (224)
..+......||...- +++ ...|++||++|++++.. .+|+ ...+++||++++|+|....+.-..
T Consensus 42 ~~~GvWe~tPG~~~~-~~~-~~~E~~~iLeG~~~lt~--ddG~--~~~l~aGD~~~~P~G~~gtWev~e 104 (116)
T 3es4_A 42 TIVAVWMAEPGIYNY-AGR-DLEETFVVVEGEALYSQ--ADAD--PVKIGPGSIVSIAKGVPSRLEILS 104 (116)
T ss_dssp CEEEEEEECSEEEEE-CCC-SEEEEEEEEECCEEEEE--TTCC--CEEECTTEEEEECTTCCEEEEECS
T ss_pred EEEEEEecCCceeEC-eeC-CCcEEEEEEEeEEEEEe--CCCe--EEEECCCCEEEECCCCeEEEEEeE
Confidence 455566888887653 233 22499999999999874 3454 589999999999999998886543
No 126
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.49 E-value=0.00069 Score=57.54 Aligned_cols=64 Identities=16% Similarity=0.124 Sum_probs=50.7
Q ss_pred cEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecC
Q 040384 91 GISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVG 160 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G 160 (224)
.++.......||.....++ +..|+.||++|++++.- .+|+ ..++++||+++||+|..-.|.-..
T Consensus 166 ~~~~GiW~~tpG~~~~~~~--~~~E~~~ILeG~v~lt~--~~G~--~~~~~aGD~~~~P~G~~~tWev~e 229 (238)
T 3myx_A 166 TLRIGVWDSTPYERISRPH--KIHELMNLIEGRVVLSL--ENGS--SLTVNTGDTVFVAQGAPCKWTSTG 229 (238)
T ss_dssp SCEEEEEEECCEEBCCEEC--SSCEEEEEEECCEEEEE--TTSC--EEEECTTCEEEECTTCEEEEEESS
T ss_pred CEEEeEEEeCCCEEECCcC--CCCEEEEEEEeEEEEEe--CCCC--EEEECCCCEEEECCCCEEEEEECc
Confidence 4778888889988554333 35799999999998763 4565 689999999999999988887653
No 127
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.14 E-value=0.0023 Score=53.86 Aligned_cols=65 Identities=12% Similarity=0.028 Sum_probs=48.4
Q ss_pred cEEEEEEEEeCCc--ccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEec
Q 040384 91 GISTNRVDLAVGG--INPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNV 159 (224)
Q Consensus 91 gis~~rv~l~pgg--~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~ 159 (224)
++-+....+.... ...+||| +.-|++||.+|++. .+ + +.......+++||++++|+|..|.+...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~G~~~-~i-~-~~~~~~~~l~~g~l~~i~p~~~h~~~~~ 72 (276)
T 3gbg_A 6 SFQTNVYRMSKFDTYIFNNLYI-NDYKMFWIDSGIAK-LI-D-KNCLVSYEINSSSIILLKKNSIQRFSLT 72 (276)
T ss_dssp TEEEEEEEECTTCEEEEEEEEC-SSCEEEEESSSCEE-EE-E-TTTTEEEEECTTEEEEECTTCEEEEEEE
T ss_pred hhhhhhhhhhcccchhccHhhh-cceEEEEEecCceE-EE-C-CccceeEEEcCCCEEEEcCCCceeeccc
Confidence 4445556666554 3478999 66899999999999 55 4 2201147899999999999999998765
No 128
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=97.00 E-value=0.0032 Score=51.95 Aligned_cols=69 Identities=19% Similarity=0.176 Sum_probs=56.9
Q ss_pred eCCcccCceecCCCCceEEEEe-CeEEEEEEeCC-----CeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEEe
Q 040384 100 AVGGINPPHLHPRSSESSIVIR-GTVLVGIITTD-----NVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSF 170 (224)
Q Consensus 100 ~pgg~~~pH~Hp~a~Ei~yVl~-G~~~v~~v~~~-----~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~ 170 (224)
.+|.++-.|+|+ -.++++|++ |++..-++|-. ++.....|..+..+.||+|.+|-..+.++. ++++...
T Consensus 68 ~~GvlRGlH~h~-q~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~-a~~~y~~ 142 (197)
T 1nxm_A 68 RKNVLRGLHAEP-WDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDF-VAYSYLV 142 (197)
T ss_dssp ETTBEEEEEECS-SCEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSE-EEEEEEE
T ss_pred CCCCcceeeecc-cceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCC-eEEEEEC
Confidence 678899999995 569999999 99877777765 677888999999999999999999998765 5544333
No 129
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=96.98 E-value=0.0057 Score=50.74 Aligned_cols=67 Identities=16% Similarity=0.298 Sum_probs=53.6
Q ss_pred eCCcccCceecC---CCCceEEEEeCeEEEEEEeCC------CeEEEEEECC--CCEEEecCCCeeEEEecCCccEEEE
Q 040384 100 AVGGINPPHLHP---RSSESSIVIRGTVLVGIITTD------NVFYSKVVTA--GMLFLIPRGLVHFQLNVGKENVLFF 167 (224)
Q Consensus 100 ~pgg~~~pH~Hp---~a~Ei~yVl~G~~~v~~v~~~------~~~~~~~l~~--GDv~vvP~G~~H~~~N~G~~~a~~~ 167 (224)
.+|-++-.|+|. .-.++++|++|++..-++|-. |+.....|.+ +..+.||+|++|-+.+.+++ +.++
T Consensus 78 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~-a~~~ 155 (205)
T 3ryk_A 78 EAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPH-TIVM 155 (205)
T ss_dssp STTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSS-EEEE
T ss_pred CCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCC-EEEE
Confidence 578899999994 257999999999877677632 5667778865 79999999999999999865 4443
No 130
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=96.95 E-value=0.011 Score=48.32 Aligned_cols=69 Identities=19% Similarity=0.252 Sum_probs=54.7
Q ss_pred eCCcccCceec--CCCCceEEEEeCeEEEEEEeCC------CeEEEEEECC--CCEEEecCCCeeEEEecCCccEEEEEE
Q 040384 100 AVGGINPPHLH--PRSSESSIVIRGTVLVGIITTD------NVFYSKVVTA--GMLFLIPRGLVHFQLNVGKENVLFFPS 169 (224)
Q Consensus 100 ~pgg~~~pH~H--p~a~Ei~yVl~G~~~v~~v~~~------~~~~~~~l~~--GDv~vvP~G~~H~~~N~G~~~a~~~~~ 169 (224)
.+|-++-.|+| ..-.++++|++|++..-++|-. |+.....|.+ +..+.||+|++|-+.+.+++ ++++..
T Consensus 56 ~~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~ 134 (185)
T 1ep0_A 56 VRGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDE-CIVNYK 134 (185)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEE
T ss_pred cCCeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEEe
Confidence 37889999999 6668999999999876666643 4667777754 68999999999999999876 554433
No 131
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=96.86 E-value=0.0039 Score=53.41 Aligned_cols=70 Identities=19% Similarity=0.255 Sum_probs=54.0
Q ss_pred EEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEec--CCCeeEEEecCC-ccEEEE
Q 040384 94 TNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIP--RGLVHFQLNVGK-ENVLFF 167 (224)
Q Consensus 94 ~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP--~G~~H~~~N~G~-~~a~~~ 167 (224)
+....+.||.-.++|-|.+-..+.||++|+++-. |+.|. ..++++||+-... +|..|..+|..+ +++.++
T Consensus 66 ln~~~~~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~Gn--~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~l 138 (256)
T 2vec_A 66 LNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYR--DSEGN--HVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRM 138 (256)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEEESEEEEE--ETTSC--EEEEETTEEEEECCCTTCCEEEEECCSSSCEEEE
T ss_pred ccccccCCCCccCCcCCCCcEEEEEEEeeEEEEE--eCCCC--EEEECCCeEEEEECCCCeEEEEEECCCCceEEEE
Confidence 4466788998899999966544779999998765 55555 5899999999995 467999999754 566544
No 132
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=96.84 E-value=0.013 Score=47.70 Aligned_cols=69 Identities=16% Similarity=0.166 Sum_probs=54.5
Q ss_pred eCCcccCceec--CCCCceEEEEeCeEEEEEEeCC------CeEEEEEECC--CCEEEecCCCeeEEEecCCccEEEEEE
Q 040384 100 AVGGINPPHLH--PRSSESSIVIRGTVLVGIITTD------NVFYSKVVTA--GMLFLIPRGLVHFQLNVGKENVLFFPS 169 (224)
Q Consensus 100 ~pgg~~~pH~H--p~a~Ei~yVl~G~~~v~~v~~~------~~~~~~~l~~--GDv~vvP~G~~H~~~N~G~~~a~~~~~ 169 (224)
.+|-++-.|+| ..-.++++|++|++..-++|-. |+.....|.+ +..+.||+|++|-+.+.+++ ++++..
T Consensus 57 ~~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~ 135 (184)
T 2ixk_A 57 ARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEY-AEFLYK 135 (184)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEE
T ss_pred CCCceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC-EEEEEe
Confidence 37889999999 6667999999999876666642 4667777755 68999999999999999876 554433
No 133
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=96.84 E-value=0.007 Score=53.73 Aligned_cols=71 Identities=21% Similarity=0.194 Sum_probs=52.4
Q ss_pred EEEeC-CcccCceecCCCCceEEEEeCeEEEEEE-eCC---------------------------------CeEEEEEEC
Q 040384 97 VDLAV-GGINPPHLHPRSSESSIVIRGTVLVGII-TTD---------------------------------NVFYSKVVT 141 (224)
Q Consensus 97 v~l~p-gg~~~pH~Hp~a~Ei~yVl~G~~~v~~v-~~~---------------------------------~~~~~~~l~ 141 (224)
+-+.| |+..++|+.+. .-++..++|+=+..+. .++ ...+..+|+
T Consensus 145 ~~~gp~g~~~~~H~D~~-dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~ 223 (342)
T 1vrb_A 145 VYAAKNGGGFKAHFDAY-TNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLT 223 (342)
T ss_dssp EEEECSSCCCCSEECSS-EEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEEC
T ss_pred EEEeCCCCCCCCeECCh-hcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEEC
Confidence 55556 88899999854 5677788899888877 332 012467999
Q ss_pred CCCEEEecCCCeeEEEecCCccEEEEE
Q 040384 142 AGMLFLIPRGLVHFQLNVGKENVLFFP 168 (224)
Q Consensus 142 ~GDv~vvP~G~~H~~~N~G~~~a~~~~ 168 (224)
+||++++|+|++|+..+.++++..-++
T Consensus 224 pGD~LyiP~gwwH~v~s~~~~~slsvs 250 (342)
T 1vrb_A 224 PGTMLYLPRGLWHSTKSDQATLALNIT 250 (342)
T ss_dssp TTCEEEECTTCEEEEECSSCEEEEEEE
T ss_pred CCcEEEeCCCccEEEEECCCCceEEEE
Confidence 999999999999999988544444343
No 134
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=96.83 E-value=0.013 Score=48.26 Aligned_cols=67 Identities=13% Similarity=0.262 Sum_probs=52.9
Q ss_pred eCCcccCceecCC---CCceEEEEeCeEEEEEEeCC------CeEEEEEECC--CCEEEecCCCeeEEEecCCccEEEE
Q 040384 100 AVGGINPPHLHPR---SSESSIVIRGTVLVGIITTD------NVFYSKVVTA--GMLFLIPRGLVHFQLNVGKENVLFF 167 (224)
Q Consensus 100 ~pgg~~~pH~Hp~---a~Ei~yVl~G~~~v~~v~~~------~~~~~~~l~~--GDv~vvP~G~~H~~~N~G~~~a~~~ 167 (224)
.+|-++-.|+|.. -.++++|++|++..-++|-. |+.....|.+ +..+.||+|++|-+.+.+++ ++++
T Consensus 73 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~-a~~l 150 (196)
T 1wlt_A 73 RKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDS-IVIY 150 (196)
T ss_dssp CTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSE-EEEE
T ss_pred CCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEE
Confidence 4788899999953 46999999999976667642 4567778864 79999999999999999874 4443
No 135
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=96.80 E-value=0.018 Score=46.84 Aligned_cols=67 Identities=13% Similarity=0.157 Sum_probs=53.0
Q ss_pred eCCcccCceecC---CCCceEEEEeCeEEEEEEeCC------CeEEEEEECC--CCEEEecCCCeeEEEecCCccEEEE
Q 040384 100 AVGGINPPHLHP---RSSESSIVIRGTVLVGIITTD------NVFYSKVVTA--GMLFLIPRGLVHFQLNVGKENVLFF 167 (224)
Q Consensus 100 ~pgg~~~pH~Hp---~a~Ei~yVl~G~~~v~~v~~~------~~~~~~~l~~--GDv~vvP~G~~H~~~N~G~~~a~~~ 167 (224)
.+|-++-.|+|. .-.++++|++|++..-++|-. |+.....|.+ +..+.||+|++|-+.+.+++ ++++
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~ 132 (183)
T 1dzr_A 55 KKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEY-AEFL 132 (183)
T ss_dssp ETTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEE
T ss_pred CCCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEE
Confidence 378899999995 457999999999876666643 4566777755 68999999999999999876 4443
No 136
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=96.79 E-value=0.018 Score=47.63 Aligned_cols=68 Identities=13% Similarity=0.164 Sum_probs=53.7
Q ss_pred eCCcccCceecCC---CCceEEEEeCeEEEEEEeCC------CeEEEEEECC--CCEEEecCCCeeEEEecCCccEEEEE
Q 040384 100 AVGGINPPHLHPR---SSESSIVIRGTVLVGIITTD------NVFYSKVVTA--GMLFLIPRGLVHFQLNVGKENVLFFP 168 (224)
Q Consensus 100 ~pgg~~~pH~Hp~---a~Ei~yVl~G~~~v~~v~~~------~~~~~~~l~~--GDv~vvP~G~~H~~~N~G~~~a~~~~ 168 (224)
.+|-++-.|+|.. -.++++|++|++..-++|-. |+.....|.+ +..+.||+|++|-+.+.+++ ++++.
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (205)
T 1oi6_A 55 KRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDD-TVMSY 133 (205)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTT-EEEEE
T ss_pred CCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCC-eEEEE
Confidence 4788899999953 47999999999876667642 4567788866 58999999999999999876 44443
No 137
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=96.71 E-value=0.02 Score=47.74 Aligned_cols=67 Identities=12% Similarity=0.166 Sum_probs=52.7
Q ss_pred eCCcccCceecCC---CCceEEEEeCeEEEEEEeCC------CeEEEEEECC--CCEEEecCCCeeEEEecCCccEEEE
Q 040384 100 AVGGINPPHLHPR---SSESSIVIRGTVLVGIITTD------NVFYSKVVTA--GMLFLIPRGLVHFQLNVGKENVLFF 167 (224)
Q Consensus 100 ~pgg~~~pH~Hp~---a~Ei~yVl~G~~~v~~v~~~------~~~~~~~l~~--GDv~vvP~G~~H~~~N~G~~~a~~~ 167 (224)
.+|-++-.|+|.. -.++++|++|++..-++|-. |+.....|.+ +..+.||+|++|-+.+.+++ ++++
T Consensus 63 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a~~l 140 (216)
T 2c0z_A 63 VRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDE-ATLC 140 (216)
T ss_dssp ETTBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEE
T ss_pred CCCcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCC-eEEE
Confidence 4788999999954 47999999999876666642 4566777765 58999999999999999876 4443
No 138
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=96.64 E-value=0.015 Score=48.00 Aligned_cols=67 Identities=13% Similarity=0.179 Sum_probs=53.7
Q ss_pred eCCcccCceecC---CCCceEEEEeCeEEEEEEeCC------CeEEEEEECC--CCEEEecCCCeeEEEecCCccEEEE
Q 040384 100 AVGGINPPHLHP---RSSESSIVIRGTVLVGIITTD------NVFYSKVVTA--GMLFLIPRGLVHFQLNVGKENVLFF 167 (224)
Q Consensus 100 ~pgg~~~pH~Hp---~a~Ei~yVl~G~~~v~~v~~~------~~~~~~~l~~--GDv~vvP~G~~H~~~N~G~~~a~~~ 167 (224)
.+|-++.+|+|. .-..+++|++|++.--+||-. |+.....|.+ +..++||+|+.|-+.+.+++ +.++
T Consensus 52 ~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~-a~~~ 129 (201)
T 4hn1_A 52 HRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDD-ATLV 129 (201)
T ss_dssp CTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTT-EEEE
T ss_pred CCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCC-eEEE
Confidence 578899999994 357999999999887777742 5666777765 88999999999999998765 4443
No 139
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=96.60 E-value=0.0027 Score=53.27 Aligned_cols=65 Identities=15% Similarity=0.230 Sum_probs=52.5
Q ss_pred EEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEE
Q 040384 93 STNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPS 169 (224)
Q Consensus 93 s~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~ 169 (224)
.+..+.++||...++|.| ...|+ +||+|++. + ++ .++.+|+-+..|.|..|.... |++.+.++.-
T Consensus 147 ~v~l~r~~~G~~~~~~~h-gG~Ei-lVL~G~~~----d-~~----~~~~~GsWlR~P~gs~h~~~a-g~~g~~i~~k 211 (223)
T 3o14_A 147 TVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVT----V-ND----EVLGRNAWLRLPEGEALSATA-GARGAKIWMK 211 (223)
T ss_dssp EEEEEEECTTCEEEECCS-SCEEE-EEEEEEEE----E-TT----EEECTTEEEEECTTCCEEEEE-EEEEEEEEEE
T ss_pred EEEEEEECCCCccCCCCC-CcEEE-EEEEeEEE----E-CC----ceECCCeEEEeCCCCccCcEE-CCCCeEEEEE
Confidence 456678899999999999 88886 99999965 3 22 689999999999999998876 5666766543
No 140
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=96.57 E-value=0.031 Score=46.96 Aligned_cols=67 Identities=13% Similarity=0.206 Sum_probs=52.6
Q ss_pred eCCcccCceecCC---CCceEEEEeCeEEEEEEeCC------CeEEEEEECC--CCEEEecCCCeeEEEecCCccEEEE
Q 040384 100 AVGGINPPHLHPR---SSESSIVIRGTVLVGIITTD------NVFYSKVVTA--GMLFLIPRGLVHFQLNVGKENVLFF 167 (224)
Q Consensus 100 ~pgg~~~pH~Hp~---a~Ei~yVl~G~~~v~~v~~~------~~~~~~~l~~--GDv~vvP~G~~H~~~N~G~~~a~~~ 167 (224)
.+|-++-.|+|.. -.++++|++|++..-++|-. |+.....|.+ +..+.||+|++|-+.+.+++ ++++
T Consensus 74 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a~vl 151 (225)
T 1upi_A 74 SAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDN-STVM 151 (225)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSS-EEEE
T ss_pred CCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCC-EEEE
Confidence 4788899999953 47999999999876666632 4566777765 58999999999999999876 4443
No 141
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=96.55 E-value=0.013 Score=49.67 Aligned_cols=71 Identities=21% Similarity=0.227 Sum_probs=54.5
Q ss_pred EEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEe--cCCCeeEEEecCC-ccEEEE
Q 040384 93 STNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLI--PRGLVHFQLNVGK-ENVLFF 167 (224)
Q Consensus 93 s~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vv--P~G~~H~~~N~G~-~~a~~~ 167 (224)
.+....+.||.-.++|-|.+-..+.||++|+++-. |+.|. ..++++||+-.. -+|..|..+|..+ +++.++
T Consensus 42 v~n~d~i~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~Gn--~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~l 115 (242)
T 1tq5_A 42 VINDDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQ--DSMGN--KEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLY 115 (242)
T ss_dssp EEEEEEECTTCEEEEEEECSCEEEEEEEESEEEEE--ESSSC--EEEEETTCEEEEECTTCEEEEEECCCSSCCEEEE
T ss_pred eeccceeCCCCcCCCcCCCCcEEEEEEEEeEEEEE--eCCCC--cEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEE
Confidence 34467788988889999966555889999998765 55454 589999999999 5568999999753 566544
No 142
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=96.54 E-value=0.012 Score=48.08 Aligned_cols=66 Identities=18% Similarity=0.354 Sum_probs=49.3
Q ss_pred EEEEEeCCc-ccCceecCCCCceEEEEeCeEEEEEEeCCC----------------------------------eEEEEE
Q 040384 95 NRVDLAVGG-INPPHLHPRSSESSIVIRGTVLVGIITTDN----------------------------------VFYSKV 139 (224)
Q Consensus 95 ~rv~l~pgg-~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~----------------------------------~~~~~~ 139 (224)
..+-+.++| ..++|+.+. .-+..+++|+=+..+..++. +.+..+
T Consensus 126 ~~~wiG~~gs~t~~H~D~~-~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~ 204 (235)
T 4gjz_A 126 INAWFGPQGTISPLHQDPQ-QNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCI 204 (235)
T ss_dssp EEEEEECTTCEEEEECCSS-EEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEE
T ss_pred eEEEEeCCCCCceeeeccc-cceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEE
Confidence 345566655 455677754 56778999999988876531 124678
Q ss_pred ECCCCEEEecCCCeeEEEecCC
Q 040384 140 VTAGMLFLIPRGLVHFQLNVGK 161 (224)
Q Consensus 140 l~~GDv~vvP~G~~H~~~N~G~ 161 (224)
|++||+++||+|..|.+.|.+.
T Consensus 205 l~pGD~LyiP~gW~H~V~~l~~ 226 (235)
T 4gjz_A 205 LSPGEILFIPVKYWHYVRALDL 226 (235)
T ss_dssp ECTTCEEEECTTCEEEEEESSS
T ss_pred ECCCCEEEeCCCCcEEEEECCC
Confidence 9999999999999999999864
No 143
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=96.45 E-value=0.011 Score=45.35 Aligned_cols=70 Identities=20% Similarity=0.189 Sum_probs=53.8
Q ss_pred eCCcccCce----ecCCCCceEEEEeCeEEEEEEeCCCe---EEEEEECCCCEEEecCCCeeEEEecCCccEEE-EEEe
Q 040384 100 AVGGINPPH----LHPRSSESSIVIRGTVLVGIITTDNV---FYSKVVTAGMLFLIPRGLVHFQLNVGKENVLF-FPSF 170 (224)
Q Consensus 100 ~pgg~~~pH----~Hp~a~Ei~yVl~G~~~v~~v~~~~~---~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~-~~~~ 170 (224)
-|+++...| +|+.-.+.+.|++|++++...+++|. .......+|+..++|++.+|.+.-..+ ++.+ +.++
T Consensus 22 lP~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsd-d~~f~leFy 99 (127)
T 3bb6_A 22 APAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTD-DTYFNIDFF 99 (127)
T ss_dssp SCGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESST-TCEEEEEEE
T ss_pred ChHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCC-CEEEEEEEE
Confidence 367788899 58777789999999999887766553 234667999999999999999987544 5555 4444
No 144
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=96.36 E-value=0.0098 Score=50.29 Aligned_cols=71 Identities=18% Similarity=0.243 Sum_probs=54.2
Q ss_pred cEEEEEEEEeCCcccCceecCCCCceEEEEeC-eEEEEEEeC--C-------------CeEE------EEEECCCCEEEe
Q 040384 91 GISTNRVDLAVGGINPPHLHPRSSESSIVIRG-TVLVGIITT--D-------------NVFY------SKVVTAGMLFLI 148 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G-~~~v~~v~~--~-------------~~~~------~~~l~~GDv~vv 148 (224)
-..--.+.+.+|...|.|+|+.-.|=+++.-| .+.+.+..+ + |+.. ..+|++|+.+-+
T Consensus 105 ~YaeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl 184 (246)
T 3kmh_A 105 CYAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICL 184 (246)
T ss_dssp CEEEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEE
T ss_pred cceeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEec
Confidence 35666778899999999999999999999988 554444333 2 1111 358999999999
Q ss_pred cCCCeeEEEecCC
Q 040384 149 PRGLVHFQLNVGK 161 (224)
Q Consensus 149 P~G~~H~~~N~G~ 161 (224)
|+|..||++..+.
T Consensus 185 ~Pg~~H~F~ae~g 197 (246)
T 3kmh_A 185 PPGLYHSFWAEAG 197 (246)
T ss_dssp CTTEEEEEEECTT
T ss_pred CCCCEEEEEecCC
Confidence 9999999986654
No 145
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=96.34 E-value=0.014 Score=51.83 Aligned_cols=74 Identities=18% Similarity=0.193 Sum_probs=54.9
Q ss_pred EEEEeCC-cccCceecCCCCceEEEEeCeEEEEEEeCCC-----------------------------------eEEEEE
Q 040384 96 RVDLAVG-GINPPHLHPRSSESSIVIRGTVLVGIITTDN-----------------------------------VFYSKV 139 (224)
Q Consensus 96 rv~l~pg-g~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~-----------------------------------~~~~~~ 139 (224)
.+-+.+. +..++|+.+. .-+..+++|+=++.+..+.. +.+..+
T Consensus 186 ~l~iG~~gs~t~~H~D~~-~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~ 264 (349)
T 3d8c_A 186 LLLIGMEGNVTPAHYGEQ-QNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETV 264 (349)
T ss_dssp EEEEECTTCEEEEECCSE-EEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEE
T ss_pred eEEEECCCCCccceECCh-hcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEE
Confidence 3556654 5678898865 57888999998888765421 346789
Q ss_pred ECCCCEEEecCCCeeEEEecCC-ccEEEEEEe
Q 040384 140 VTAGMLFLIPRGLVHFQLNVGK-ENVLFFPSF 170 (224)
Q Consensus 140 l~~GDv~vvP~G~~H~~~N~G~-~~a~~~~~~ 170 (224)
|++||+++||+|..|...|.++ ...+.+.+.
T Consensus 265 l~pGD~LyiP~gWwH~V~~l~d~~~sisvn~w 296 (349)
T 3d8c_A 265 VGPGDVLYIPMYWWHHIESLLNGGITITVNFW 296 (349)
T ss_dssp ECTTCEEEECTTCEEEEEECTTSCCEEEEEEE
T ss_pred ECCCCEEEECCCCcEEEEEcCCCCcEEEEEEE
Confidence 9999999999999999999873 334444443
No 146
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=95.88 E-value=0.031 Score=51.36 Aligned_cols=65 Identities=18% Similarity=0.273 Sum_probs=48.2
Q ss_pred EEEEEeCCccc--CceecCCCCceEEEEeCeEEEEEEeCCC----------------eEEEEEECCCCEEEecCCCeeEE
Q 040384 95 NRVDLAVGGIN--PPHLHPRSSESSIVIRGTVLVGIITTDN----------------VFYSKVVTAGMLFLIPRGLVHFQ 156 (224)
Q Consensus 95 ~rv~l~pgg~~--~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~----------------~~~~~~l~~GDv~vvP~G~~H~~ 156 (224)
..+.+.|+|.. ++||-+ ..-++..++|+=+..+..+.. ..+..+|++||++++|+|++|+.
T Consensus 141 ~n~y~~~~g~~g~~~H~D~-~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~ 219 (442)
T 2xdv_A 141 SNVYITPAGSQGLPPHYDD-VEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQA 219 (442)
T ss_dssp EEEEEECTTCBCSCSEECS-SEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEE
T ss_pred cceEECCCCCCCccceECC-cceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEE
Confidence 34456666643 599974 456777888988887766531 12468999999999999999999
Q ss_pred EecC
Q 040384 157 LNVG 160 (224)
Q Consensus 157 ~N~G 160 (224)
.+.+
T Consensus 220 ~s~~ 223 (442)
T 2xdv_A 220 DTPA 223 (442)
T ss_dssp ECCS
T ss_pred EecC
Confidence 8775
No 147
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=95.45 E-value=0.056 Score=47.86 Aligned_cols=67 Identities=15% Similarity=0.194 Sum_probs=50.5
Q ss_pred EEEEeCC-cccCceecCCCC-ceEEEEeCeEEEEEEeCCC---------------------------------------e
Q 040384 96 RVDLAVG-GINPPHLHPRSS-ESSIVIRGTVLVGIITTDN---------------------------------------V 134 (224)
Q Consensus 96 rv~l~pg-g~~~pH~Hp~a~-Ei~yVl~G~~~v~~v~~~~---------------------------------------~ 134 (224)
.+-+.+. ...+.|+++..+ -+..+++|+=+..+..++. +
T Consensus 175 ~~~~G~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~~~~~~~~~~~~w~~~~~P~~~~~~~p~~~~ 254 (336)
T 3k2o_A 175 WFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFK 254 (336)
T ss_dssp EEEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHHHHGGGTTCHHHHHHHTGGGGGSTTSCGGGC
T ss_pred EEEECCCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCcccccCCCccchhhhhhhhCcchhhhcccccCc
Confidence 3556664 456788887653 5888999988887775431 1
Q ss_pred EEEEEECCCCEEEecCCCeeEEEecCCc
Q 040384 135 FYSKVVTAGMLFLIPRGLVHFQLNVGKE 162 (224)
Q Consensus 135 ~~~~~l~~GDv~vvP~G~~H~~~N~G~~ 162 (224)
.+...+++||++++|.|..|+..|.++.
T Consensus 255 ~~~~~l~pGd~l~iP~gw~H~v~~~~~s 282 (336)
T 3k2o_A 255 PLEILQKPGETVFVPGGWWHVVLNLDTT 282 (336)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSCE
T ss_pred eEEEEECCCCEEEeCCCCcEEEecCCCe
Confidence 2467899999999999999999998753
No 148
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=95.39 E-value=0.05 Score=50.10 Aligned_cols=79 Identities=16% Similarity=0.099 Sum_probs=56.1
Q ss_pred EEEEeC-CcccCceecCCCC-ceEEEEeCeEEEEEEeCCC-------------------------eEEEEEECCCCEEEe
Q 040384 96 RVDLAV-GGINPPHLHPRSS-ESSIVIRGTVLVGIITTDN-------------------------VFYSKVVTAGMLFLI 148 (224)
Q Consensus 96 rv~l~p-gg~~~pH~Hp~a~-Ei~yVl~G~~~v~~v~~~~-------------------------~~~~~~l~~GDv~vv 148 (224)
.+-|.| |...+.|+.+.++ -+..+++|+=+.-+..|.. +.+...+++||+++|
T Consensus 199 ~~~mGp~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~~~v~l~pGE~LfI 278 (451)
T 2yu1_A 199 YCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDCQRIELKQGYTFVI 278 (451)
T ss_dssp EEEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCCEEEEECTTCEEEE
T ss_pred EEEEccCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccceEEEECCCcEEEe
Confidence 345555 4466779988754 4667999998888876541 235678999999999
Q ss_pred cCCCeeEEEecCCccEEEEEEeeCCC
Q 040384 149 PRGLVHFQLNVGKENVLFFPSFNSQL 174 (224)
Q Consensus 149 P~G~~H~~~N~G~~~a~~~~~~~s~~ 174 (224)
|.|+.|.+.|..+.-++-.-++++.|
T Consensus 279 PsGWwH~V~nledsIait~NF~~~~n 304 (451)
T 2yu1_A 279 PSGWIHAVYTPTDTLVFGGNFLHSFN 304 (451)
T ss_dssp CTTCEEEEECSSCEEEEEEEECCSSS
T ss_pred CCCceEEEecCCCeEEEeeeeCCccc
Confidence 99999999998654333233455544
No 149
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=95.30 E-value=0.03 Score=48.72 Aligned_cols=71 Identities=15% Similarity=0.135 Sum_probs=48.0
Q ss_pred EEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCC--CeE-----EEEEECCCCEEEecCCCeeEEEecCCccE
Q 040384 92 ISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTD--NVF-----YSKVVTAGMLFLIPRGLVHFQLNVGKENV 164 (224)
Q Consensus 92 is~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~--~~~-----~~~~l~~GDv~vvP~G~~H~~~N~G~~~a 164 (224)
+..+|+.+.||+.+.||.=+ .|+....+|..++.+--.. +.. ....+++|+++++-....|+..|.|+++-
T Consensus 91 l~~vRlrL~PG~~I~~HrD~--~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~GE~w~~d~~~~H~v~N~g~~~R 168 (290)
T 1e5r_A 91 LQMARSRNLKNAIVIPHRDF--VELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRPGEIWFLDAATVHSAVNFSEISR 168 (290)
T ss_dssp EEEEEEEEEESEEEEEECCC----------CBCCEEEECSCCTTEEEEETTEEECCCTTEEEECCTTSCEEEEESSSSCC
T ss_pred hheEEEEeCCCCEeeCccCc--cccccccCCceEEEeeEecCCCcEEEECCEEEecCCCCEEEEcCCCeeEEEcCCCCCe
Confidence 47788899999999888443 3555555777766554221 111 25789999999999999999999998653
No 150
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=95.27 E-value=0.049 Score=48.00 Aligned_cols=74 Identities=14% Similarity=0.053 Sum_probs=53.1
Q ss_pred EEEEEEEEeCC-cccCceecCCCCceEEEEeCeEEEEEEeCCC------------------------------eEEEEEE
Q 040384 92 ISTNRVDLAVG-GINPPHLHPRSSESSIVIRGTVLVGIITTDN------------------------------VFYSKVV 140 (224)
Q Consensus 92 is~~rv~l~pg-g~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~------------------------------~~~~~~l 140 (224)
+....+-+.+. +...+|+-+. .-+..+++|+=+..+..+.. +.+..+|
T Consensus 166 ~~~s~l~~g~~g~~~~~H~D~~-~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L 244 (338)
T 3al5_A 166 FFSSVFRISSPGLQLWTHYDVM-DNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSL 244 (338)
T ss_dssp EEEEEEEEECTTCEEEEECCSS-EEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEE
T ss_pred cccceeEECCCCCCccceECCc-ccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEE
Confidence 33344555554 4567798764 56777889998888765420 2467899
Q ss_pred CCCCEEEecCCCeeEEEecCCccEEEEE
Q 040384 141 TAGMLFLIPRGLVHFQLNVGKENVLFFP 168 (224)
Q Consensus 141 ~~GDv~vvP~G~~H~~~N~G~~~a~~~~ 168 (224)
++||+++||+|+.|...|.+. .+.+.
T Consensus 245 ~pGD~LyiP~gWwH~v~~l~~--sisvn 270 (338)
T 3al5_A 245 EAGDVLFIPALWFHNVISEEF--GVGVN 270 (338)
T ss_dssp CTTCEEEECTTCEEEEEESSC--EEEEE
T ss_pred CCCCEEEECCCCeEEEeeCCC--EEEEE
Confidence 999999999999999999853 44454
No 151
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=95.17 E-value=0.041 Score=51.15 Aligned_cols=65 Identities=20% Similarity=0.284 Sum_probs=50.6
Q ss_pred EEEeC-CcccCceecCCCC-ceEEEEeCeEEEEEEeCC-------------------------CeEEEEEECCCCEEEec
Q 040384 97 VDLAV-GGINPPHLHPRSS-ESSIVIRGTVLVGIITTD-------------------------NVFYSKVVTAGMLFLIP 149 (224)
Q Consensus 97 v~l~p-gg~~~pH~Hp~a~-Ei~yVl~G~~~v~~v~~~-------------------------~~~~~~~l~~GDv~vvP 149 (224)
+-|.| |...+.|+.+..+ -+..+++|+=+.-+..|. .+.+...+++||+++||
T Consensus 270 ~~mG~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIP 349 (488)
T 3kv5_D 270 CLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVP 349 (488)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEEC
T ss_pred EEEcCCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeC
Confidence 45555 5567789998765 356799999888888663 12356899999999999
Q ss_pred CCCeeEEEecCC
Q 040384 150 RGLVHFQLNVGK 161 (224)
Q Consensus 150 ~G~~H~~~N~G~ 161 (224)
.|+.|++.|..+
T Consensus 350 sGWwH~V~nled 361 (488)
T 3kv5_D 350 TGWIHAVLTSQD 361 (488)
T ss_dssp TTCEEEEEEEEE
T ss_pred CCceEEeeCCCC
Confidence 999999999854
No 152
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=95.16 E-value=0.18 Score=43.25 Aligned_cols=72 Identities=24% Similarity=0.250 Sum_probs=58.1
Q ss_pred ccccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCee-EEEecCCccEEE
Q 040384 88 NTQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVH-FQLNVGKENVLF 166 (224)
Q Consensus 88 ~~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H-~~~N~G~~~a~~ 166 (224)
..-|-|-.++.++|+--.|+-.|.--.| +||++|++.++ + ..+.+|....+|+|+.- .+.-.|++++.+
T Consensus 87 ~d~GaSTl~V~fpp~~~~P~Gi~~ad~E-~fVL~G~i~~G-----~----~~l~~h~Y~f~PaGV~~~~~kv~~~~g~~i 156 (303)
T 2qdr_A 87 HDSGASTSRVVLPPKFEAPSGIFTADLE-IFVIKGAIQLG-----E----WQLNKHSYSFIPAGVRIGSWKVLGGEEAEI 156 (303)
T ss_dssp CTTSCEEEEEEECTTCEECCBEESSCEE-EEEEESEEEET-----T----EEECTTEEEEECTTCCBCCEEEETTSCEEE
T ss_pred CCCCcceEEEEecCCCCCCCcccccceE-EEEEEeEEEeC-----C----EEecCCceEEecCCCccCceeecCCCCcEE
Confidence 4457888999999999999988854456 99999998875 3 68999999999999843 355567788877
Q ss_pred EEE
Q 040384 167 FPS 169 (224)
Q Consensus 167 ~~~ 169 (224)
+-+
T Consensus 157 L~f 159 (303)
T 2qdr_A 157 LWM 159 (303)
T ss_dssp EEE
T ss_pred EEE
Confidence 766
No 153
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=94.93 E-value=0.14 Score=47.66 Aligned_cols=69 Identities=19% Similarity=0.245 Sum_probs=47.8
Q ss_pred EEEEEeCCcc--cCceecCCCCceEEEEeCeEEEEEEeCCC--------------------eEEEEEECCCCEEEecCCC
Q 040384 95 NRVDLAVGGI--NPPHLHPRSSESSIVIRGTVLVGIITTDN--------------------VFYSKVVTAGMLFLIPRGL 152 (224)
Q Consensus 95 ~rv~l~pgg~--~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~--------------------~~~~~~l~~GDv~vvP~G~ 152 (224)
+.+.+.|+|. .+|||-+. .-++.-++|+=+..+..+.. .....+|++||++++|+|+
T Consensus 166 ~N~Y~tp~Gs~g~~pH~D~~-DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~ 244 (489)
T 4diq_A 166 SNVYLTPPNSQGFAPHYDDI-EAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGF 244 (489)
T ss_dssp EEEEEECSSBCCSCCBCCSS-EEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTC
T ss_pred ceEEecCCCcccccCccCCc-ceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCC
Confidence 3456667664 46998753 44555566766666655431 1246899999999999999
Q ss_pred eeEEEecCCccE
Q 040384 153 VHFQLNVGKENV 164 (224)
Q Consensus 153 ~H~~~N~G~~~a 164 (224)
+|+..+.+++..
T Consensus 245 ~H~~~s~~~~~S 256 (489)
T 4diq_A 245 IHQAECQDGVHS 256 (489)
T ss_dssp EEEEEBCSSCCE
T ss_pred ceEEEecCCCce
Confidence 999998865443
No 154
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=94.91 E-value=0.19 Score=43.19 Aligned_cols=65 Identities=18% Similarity=0.144 Sum_probs=51.2
Q ss_pred EEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecC--CCeeEEEecCCccEEE
Q 040384 98 DLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPR--GLVHFQLNVGKENVLF 166 (224)
Q Consensus 98 ~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~--G~~H~~~N~G~~~a~~ 166 (224)
...++.-.++|=|.+-.-+.||++|+++-. |+-|. ...+++||+=..-+ |..|.-+|..++++..
T Consensus 45 ~~~~~~gf~~HPHrg~EtVTyvl~G~~~H~--DS~Gn--~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~ 111 (277)
T 2p17_A 45 DIFERGTFDVHPHRGIETVTYVISGELEHF--DSKAG--HSTLGPGDVQWMTAGRGVVHKEDPASGSTVHS 111 (277)
T ss_dssp EEECTTCCCCEEECSEEEEEEEEESCEEEE--ETTTE--EEEECTTCEEEEECTTCEEEEEEECTTCCEEE
T ss_pred CCCCCCCCCCCCCCCcEEEEEEEEeEEEEe--eCCCC--ceEECCCeEEEEeCCCCEEEEeecCCCCCEEE
Confidence 667888899999955444779999998765 66565 68999999988876 6789999987666654
No 155
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=94.87 E-value=0.22 Score=42.86 Aligned_cols=92 Identities=16% Similarity=0.189 Sum_probs=55.6
Q ss_pred eEEEeecccCCCCccccEEEEEEEEeCCccc---CceecCCC--C------ceEEE-Ee---CeEEEEEEeCCC-eEEEE
Q 040384 75 AVTEGNVHEFPGVNTQGISTNRVDLAVGGIN---PPHLHPRS--S------ESSIV-IR---GTVLVGIITTDN-VFYSK 138 (224)
Q Consensus 75 ~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~---~pH~Hp~a--~------Ei~yV-l~---G~~~v~~v~~~~-~~~~~ 138 (224)
.|......+.| .-.+-+..+ +.|||.- |||.|.+. . |+.|- +. |-+.-.+-.+++ --...
T Consensus 139 ~V~~i~~~~~~---a~~LlvgEv-~tpgG~WSSyPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d~~~de~~ 214 (270)
T 2qjv_A 139 LVHNILPDSQL---ADSLLVVEV-YTNAGATSSWPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDRSLDECM 214 (270)
T ss_dssp EEEEEECTTSC---CSSCEEEEE-EECTTCEESCSCEECEEEETTTEEECEEEEEEEEESTTCEEEEEEECTTSSSEEEE
T ss_pred hhhhhcCCCCC---cceEEEEEE-EcCCCccccCCCcccccccCcccccceeEEEEECCCCCCEEEEEEeCCCCCCceEE
Confidence 34344333444 334666666 8898865 99999764 5 88864 33 444333322222 12358
Q ss_pred EECCCCEEEecCCCeeEEEecCCccEEEEEEee
Q 040384 139 VVTAGMLFLIPRGLVHFQLNVGKENVLFFPSFN 171 (224)
Q Consensus 139 ~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~~ 171 (224)
.++-||++.+|+|. |-....-.....++-++-
T Consensus 215 ~V~~~d~VlvP~Gy-Hp~~a~pGy~~YylwvMa 246 (270)
T 2qjv_A 215 AVYNRDVVXVPXGY-HPVATIAGYDNYYLNVMA 246 (270)
T ss_dssp EEETTCEEEESSSB-CCEEECTTCEEEEEEEEE
T ss_pred EEECCCEEecCCCc-CCCcCCCCcccEEEEEEE
Confidence 99999999999999 996544223344444443
No 156
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=94.87 E-value=0.091 Score=48.35 Aligned_cols=78 Identities=19% Similarity=0.163 Sum_probs=55.0
Q ss_pred EEEeC-CcccCceecCCCC-ceEEEEeCeEEEEEEeCCC-------------------------eEEEEEECCCCEEEec
Q 040384 97 VDLAV-GGINPPHLHPRSS-ESSIVIRGTVLVGIITTDN-------------------------VFYSKVVTAGMLFLIP 149 (224)
Q Consensus 97 v~l~p-gg~~~pH~Hp~a~-Ei~yVl~G~~~v~~v~~~~-------------------------~~~~~~l~~GDv~vvP 149 (224)
+-+.| |+....|.-+..+ -+..|++|+=+.-+..|.. +.+...+++||++++|
T Consensus 235 ~~mG~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGetlfIP 314 (447)
T 3kv4_A 235 CLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIP 314 (447)
T ss_dssp EEEECTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTCEEEEC
T ss_pred EEEeCCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCcEEecC
Confidence 44554 5567789888765 3567999998888876541 2356899999999999
Q ss_pred CCCeeEEEecCCccEEEEEEeeCCC
Q 040384 150 RGLVHFQLNVGKENVLFFPSFNSQL 174 (224)
Q Consensus 150 ~G~~H~~~N~G~~~a~~~~~~~s~~ 174 (224)
.|..|++.|..+.=++---++++.|
T Consensus 315 sGWwH~V~nledsIai~~NF~~~~n 339 (447)
T 3kv4_A 315 TGWIHAVLTPVDCLAFGGNFLHSLN 339 (447)
T ss_dssp TTCEEEEEESSCEEEEEEEECCSTT
T ss_pred CCCeEEEecCCCEEEEccccccccC
Confidence 9999999998654222223444443
No 157
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=94.84 E-value=0.21 Score=46.01 Aligned_cols=56 Identities=13% Similarity=0.067 Sum_probs=43.8
Q ss_pred cCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEE
Q 040384 105 NPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFF 167 (224)
Q Consensus 105 ~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~ 167 (224)
...-++-++.|++++.+|++++.- +-|+ ..+++||++|||+|+.+.+.=.+ +++.+
T Consensus 170 ~~~f~NaDGD~Livpq~G~l~i~T--EfG~---L~v~pgei~VIPRGi~frv~l~~--p~Rgy 225 (471)
T 1eyb_A 170 NRCFYNSDGDFLIVPQKGNLLIYT--EFGK---MLVQPNEICVIQRGMRFSIDVFE--ETRGY 225 (471)
T ss_dssp SEEEEESSEEEEEEEEESCEEEEE--TTEE---EEECTTEEEEECTTCCEEEECSS--SEEEE
T ss_pred cceeecCCCCEEEEEEeCCEEEEE--eccc---EEeccCCEEEECCccEEEEeeCC--CceEE
Confidence 345667789999999999998774 3354 67999999999999999986554 55443
No 158
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=94.75 E-value=0.068 Score=48.03 Aligned_cols=66 Identities=21% Similarity=0.274 Sum_probs=50.7
Q ss_pred EEEeC-CcccCceecCCCCc-eEEEEeCeEEEEEEeCCC-------------------------eEEEEEECCCCEEEec
Q 040384 97 VDLAV-GGINPPHLHPRSSE-SSIVIRGTVLVGIITTDN-------------------------VFYSKVVTAGMLFLIP 149 (224)
Q Consensus 97 v~l~p-gg~~~pH~Hp~a~E-i~yVl~G~~~v~~v~~~~-------------------------~~~~~~l~~GDv~vvP 149 (224)
+-+.| |+..+.|+.+..+- +..+++|+=+.-+..|.. +.+...+++||++++|
T Consensus 151 l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtLfIP 230 (371)
T 3k3o_A 151 CLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIP 230 (371)
T ss_dssp EEEECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCEEEEEETTCEEEEC
T ss_pred EEEcCCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCceEEEEECCCcEEEeC
Confidence 44554 55677899988664 557999998888875431 2357899999999999
Q ss_pred CCCeeEEEecCCc
Q 040384 150 RGLVHFQLNVGKE 162 (224)
Q Consensus 150 ~G~~H~~~N~G~~ 162 (224)
.|..|++.|..+.
T Consensus 231 sGWwH~V~nledS 243 (371)
T 3k3o_A 231 TGWIHAVLTPVDC 243 (371)
T ss_dssp TTCEEEEEEEEEE
T ss_pred CCCeEEEecCCCe
Confidence 9999999997543
No 159
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=94.51 E-value=0.084 Score=47.85 Aligned_cols=66 Identities=20% Similarity=0.281 Sum_probs=50.9
Q ss_pred EEEEeC-CcccCceecCCCCc-eEEEEeCeEEEEEEeCCC-------------------------eEEEEEECCCCEEEe
Q 040384 96 RVDLAV-GGINPPHLHPRSSE-SSIVIRGTVLVGIITTDN-------------------------VFYSKVVTAGMLFLI 148 (224)
Q Consensus 96 rv~l~p-gg~~~pH~Hp~a~E-i~yVl~G~~~v~~v~~~~-------------------------~~~~~~l~~GDv~vv 148 (224)
.+-+.| |+..+.|+.+..+- +..+++|+=+.-+..|.. +.+...+++||++++
T Consensus 178 ~l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~~v~l~pGe~lfI 257 (397)
T 3kv9_A 178 YCLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFV 257 (397)
T ss_dssp EEEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEEEEEETTCEEEE
T ss_pred EEEEcCCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceEEEEECCCCEEEe
Confidence 355655 55667799987654 567999998888876531 235679999999999
Q ss_pred cCCCeeEEEecCC
Q 040384 149 PRGLVHFQLNVGK 161 (224)
Q Consensus 149 P~G~~H~~~N~G~ 161 (224)
|.|..|+..|..+
T Consensus 258 PsGW~H~V~nled 270 (397)
T 3kv9_A 258 PTGWIHAVLTSQD 270 (397)
T ss_dssp CTTCEEEEEEEEE
T ss_pred CCCCeEEccCCcC
Confidence 9999999999854
No 160
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=94.31 E-value=0.32 Score=42.08 Aligned_cols=88 Identities=16% Similarity=0.162 Sum_probs=59.9
Q ss_pred CceEEEeecccCCCCcccc--EEEEEEEEeCCcccCceecCCCCceEEEE-eCeEEEEEEeCCCeEEEEEECCCCEEEec
Q 040384 73 GRAVTEGNVHEFPGVNTQG--ISTNRVDLAVGGINPPHLHPRSSESSIVI-RGTVLVGIITTDNVFYSKVVTAGMLFLIP 149 (224)
Q Consensus 73 g~~~~~~~~~~~P~l~~~g--is~~rv~l~pgg~~~pH~Hp~a~Ei~yVl-~G~~~v~~v~~~~~~~~~~l~~GDv~vvP 149 (224)
|..++.+. ..|.+...| +-+....+.|+.-.++|=|.+-.-+.||+ +|+++-. |+.|. ...+++||+-..-
T Consensus 21 G~~v~R~~--~~~~~~~~gpf~~ld~~~~~~~~Gf~~HPHrg~EtVTyvl~~G~~~H~--DS~Gn--~~~i~~GdvQwMt 94 (290)
T 1j1l_A 21 GARVRRSI--GRPELKNLDPFLLFDEFKGGRPGGFPDHPHRGFETVSYLLEGGSMAHE--DFCGH--TGKMNPGDLQWMT 94 (290)
T ss_dssp TEEEEECT--TSTTCCCCTTEEEEEEEEECTTCBEEEEEEBSEEEEEEECSSSCEEEE--ETTSC--EEEECTTCEEEEE
T ss_pred CeEEEEeC--CCccccccCcEEEEEccccCCCCCCCCCCCCCeEEEEEECcceEEEEe--eCCCC--ceEECCCcEEEEe
Confidence 34444443 344444333 24445567788778999995543377999 9998765 65555 5899999998887
Q ss_pred C--CCeeEEEecCCccEEE
Q 040384 150 R--GLVHFQLNVGKENVLF 166 (224)
Q Consensus 150 ~--G~~H~~~N~G~~~a~~ 166 (224)
+ |..|.-+|..++++..
T Consensus 95 AG~GI~HsE~~~~~~~~~~ 113 (290)
T 1j1l_A 95 AGRGILHAEMPCSEEPAHG 113 (290)
T ss_dssp CTTCEEEEEEECSSSCEEE
T ss_pred CCCCEEEEeEcCCCCCEEE
Confidence 5 6789999986666654
No 161
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=94.20 E-value=0.26 Score=40.42 Aligned_cols=89 Identities=12% Similarity=0.130 Sum_probs=58.1
Q ss_pred cccCCCCcccc-EEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCC-CeE-----EEEEECCCCEEEecCCCe
Q 040384 81 VHEFPGVNTQG-ISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTD-NVF-----YSKVVTAGMLFLIPRGLV 153 (224)
Q Consensus 81 ~~~~P~l~~~g-is~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~-~~~-----~~~~l~~GDv~vvP~G~~ 153 (224)
.+++|.+.... -++....|.||+.+.||..+....+-+ -++++.++ +.. .....++|+.+++--...
T Consensus 90 L~~ip~~~~~~~~~a~fs~L~pG~~I~pH~g~~n~~lR~------HL~L~~p~~~~~i~V~~~~~~w~eGe~~~fDds~~ 163 (197)
T 3rcq_A 90 LEKFPETTGCRRGQIKYSIMHPGTHVWPHTGPTNCRLRM------HLGLVIPKEGCKIRCANETKTWEEGKVLIFDDSFE 163 (197)
T ss_dssp HTTCHHHHTCTTCEEEEEEECTTEEEEEECCSCTTEEEE------EEEEECCSSSEEEEETTEEECCCBTCEEEECTTSC
T ss_pred HHhCcccccCCcceEEEEEeCCCCCcCCeeCCCCCeEEE------EEEEEeCCCCcEEEECCEEEEeeCCcEEEEcCCeE
Confidence 35566544211 156778899999999999875433322 22333222 110 267899999999999999
Q ss_pred eEEEecCCccEEEEEEeeCCCCc
Q 040384 154 HFQLNVGKENVLFFPSFNSQLPG 176 (224)
Q Consensus 154 H~~~N~G~~~a~~~~~~~s~~pg 176 (224)
|+..|.++++- ++.+++-..|.
T Consensus 164 Hev~N~~d~~R-vvL~~D~~rPd 185 (197)
T 3rcq_A 164 HEVWQDASSFR-LIFIVDVWHPE 185 (197)
T ss_dssp EEEEECSSSCE-EEEEEEEECTT
T ss_pred EEEEECCCCCE-EEEEEeeeCCC
Confidence 99999998754 44455544443
No 162
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=93.85 E-value=0.23 Score=42.94 Aligned_cols=56 Identities=9% Similarity=-0.010 Sum_probs=41.4
Q ss_pred EeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCC
Q 040384 99 LAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGK 161 (224)
Q Consensus 99 l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~ 161 (224)
+.+|.....-. ...-|+++++|+..+.+ +++ ++.|++||.+.||+|..|.+.-..+
T Consensus 214 ~G~Ges~~~~~--~~d~wiWqLEGss~Vt~---~~q--~~~L~~~DsLLIpa~~~y~~~r~~g 269 (286)
T 2qnk_A 214 YGQGSSEGLRQ--NVDVWLWQLEGSSVVTM---GGR--RLSLAPDDSLLVLAGTSYAWERTQG 269 (286)
T ss_dssp ECSEEEEECCC--SSCEEEEEEESCEEEEE---TTE--EEEECTTEEEEECTTCCEEEEECTT
T ss_pred EcCCccccccC--cCcEEEEEEcCceEEEE---CCe--EEeccCCCEEEecCCCeEEEEecCC
Confidence 66665432211 23678999999998776 555 7899999999999999999875433
No 163
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=93.84 E-value=0.14 Score=46.32 Aligned_cols=66 Identities=18% Similarity=0.240 Sum_probs=50.3
Q ss_pred EEEeC-CcccCceecCCCC-ceEEEEeCeEEEEEEeCCC-------------------------eEEEEEECCCCEEEec
Q 040384 97 VDLAV-GGINPPHLHPRSS-ESSIVIRGTVLVGIITTDN-------------------------VFYSKVVTAGMLFLIP 149 (224)
Q Consensus 97 v~l~p-gg~~~pH~Hp~a~-Ei~yVl~G~~~v~~v~~~~-------------------------~~~~~~l~~GDv~vvP 149 (224)
+-+.| |+....|.-+.++ -+..+++|+=+.-+..|.. +.+...+++||++++|
T Consensus 178 ~~mGp~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtlfIP 257 (392)
T 3pua_A 178 CLICVKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKCYKCIVKQGQTLFIP 257 (392)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCCEEEEEETTCEEEEC
T ss_pred EEEeCCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccceEEEEECCCcEEeeC
Confidence 44554 5567789888765 4667999998887776531 2357899999999999
Q ss_pred CCCeeEEEecCCc
Q 040384 150 RGLVHFQLNVGKE 162 (224)
Q Consensus 150 ~G~~H~~~N~G~~ 162 (224)
.|..|++.|..+.
T Consensus 258 sGWwH~V~nledS 270 (392)
T 3pua_A 258 SGWIYATLTPVDC 270 (392)
T ss_dssp TTCEEEEEEEEEE
T ss_pred CCceEEEecCCCE
Confidence 9999999998543
No 164
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=93.71 E-value=2 Score=35.84 Aligned_cols=148 Identities=16% Similarity=0.166 Sum_probs=89.7
Q ss_pred CCccCCCeeeeccCCCcccCCCCceEEEeecccCC------CCccccEEEEEEEEeCCcccCceecC-CCCceEEEEeCe
Q 040384 51 TEVTSDDFFFDLSEEGNLSNAFGRAVTEGNVHEFP------GVNTQGISTNRVDLAVGGINPPHLHP-RSSESSIVIRGT 123 (224)
Q Consensus 51 ~~vt~~df~f~l~~~~~~~~~~g~~~~~~~~~~~P------~l~~~gis~~rv~l~pgg~~~pH~Hp-~a~Ei~yVl~G~ 123 (224)
...++++++=.|.-.+ .+.||..++.+....- +-+ ...+....-|.+|.. -|||- ++.|+.+-..|.
T Consensus 17 ~~~ta~~lI~~L~L~P---HPEGG~yrEt~Rs~~~v~~~~~~~R-~~~TaIYfLL~~g~~--S~~HRv~sdEiW~~h~G~ 90 (225)
T 3m3i_A 17 PQNTAEFWIKRLQLVP---HPEGGYYSEVVRSAHKVDNEEGNRR-HAYTTIYFLCTPESP--SHLHRLCSDETWMYHAGD 90 (225)
T ss_dssp -CCCHHHHHHHTTCEE---CTTSSEEEEEEECSSEEECTTSCEE-ESCEEEEEEECSSSC--EEEEECSSEEEEEEEEES
T ss_pred CCCCHHHHHHHCCCcc---CCCCceEEEEEECCCcccCCCCCCc-ccceeEEEEecCCCC--cccEEecCCEEEEEECCC
Confidence 3445555543332222 4688988888765442 111 124555566777775 46662 588999999997
Q ss_pred -EEEEEEeCCC----------------------------eEEEEEE----CCCC--EEEecCCCeeEEEecCCc-----c
Q 040384 124 -VLVGIITTDN----------------------------VFYSKVV----TAGM--LFLIPRGLVHFQLNVGKE-----N 163 (224)
Q Consensus 124 -~~v~~v~~~~----------------------------~~~~~~l----~~GD--v~vvP~G~~H~~~N~G~~-----~ 163 (224)
+++.++.++| +..+..| .+|+ -++||.|.+....-.+++ .
T Consensus 91 pL~l~li~~dG~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~LG~d~~~Ge~pQ~vVP~G~WqaA~~~~~~~~~~~~ 170 (225)
T 3m3i_A 91 PLQLHVILKDPQDEDRIAAQPPAAPQAETDTADARPKYQVYRRVLVGARVERGELLQYTVPGGAIFGSSVAADGADGQAG 170 (225)
T ss_dssp CEEEEEEESSSTTTTC------------------CCSSCEEEEEEESSCGGGTCBSEEEECTTCEEEEECCSSSTTCSSS
T ss_pred CEEEEEEcCCCcccccccccccccccccccccccccccCceEEEEeCCCccCCceeEEEeCCCEEEEEEECCCCcCcCCC
Confidence 6788888777 4555666 3466 578999998777655543 3
Q ss_pred EEEEEEeeCCCCcceehhhhhhcCCCCCCHHHHHhhcCCCHHHHHHHHh
Q 040384 164 VLFFPSFNSQLPGTQFVHSSLFNTTPPIPNEVLTKTFLVGDEVINAIKA 212 (224)
Q Consensus 164 a~~~~~~~s~~pg~~~~~~~lf~~~p~~p~evla~af~v~~~~v~~l~~ 212 (224)
..+++.. -.||+..-...+ ++.+-|.+.|.--++.|++|-.
T Consensus 171 ~sLVsCt--VaPGFdF~DFel------~~~~~L~~~~P~~~~~I~~lt~ 211 (225)
T 3m3i_A 171 YSLVSCI--VSPGFDYRDFEI------FTQAQLMELYPQHEAVIKQMAY 211 (225)
T ss_dssp CEEEEEE--EESCCCGGGCEE------CBHHHHHHHCGGGHHHHHHHSB
T ss_pred eEEEEEE--EcCCccchhcEe------cCHHHHHHHCchHHHHHHHhch
Confidence 3444322 235554433222 4566677777777778887753
No 165
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=93.34 E-value=2.5 Score=33.77 Aligned_cols=128 Identities=18% Similarity=0.194 Sum_probs=83.2
Q ss_pred CCC-CceEEEeecccC-------CCCccccEEEEEEEEeCCcccCceecC-CCCceEEEEeCe-EEEEEEeCCCeEEEEE
Q 040384 70 NAF-GRAVTEGNVHEF-------PGVNTQGISTNRVDLAVGGINPPHLHP-RSSESSIVIRGT-VLVGIITTDNVFYSKV 139 (224)
Q Consensus 70 ~~~-g~~~~~~~~~~~-------P~l~~~gis~~rv~l~pgg~~~pH~Hp-~a~Ei~yVl~G~-~~v~~v~~~~~~~~~~ 139 (224)
.+. ||..++...... .+-+ ...+....-|.+|... |||- ++.|+.+-..|. +++.+++++|+..+..
T Consensus 24 HPEEGG~yrEt~rs~~~v~~~~~~~~R-~~~TaIYfLL~~~~~S--~~HRv~sdEiW~~~~G~pL~l~~~~~dG~~~~~~ 100 (172)
T 3loi_A 24 HPASGGWFRETYRSDVQVEAEGFDGKR-SVLTMIYYLMQAGQPD--PFHRVKSDETFVHNLGGSMKIHMIHPDGSYSCSI 100 (172)
T ss_dssp CTTSSSEEEEEEECSCEECCTTSSSCE-ESCEEEEEEEETTCCE--EEEECSSEEEEEEEEESCEEEEEECTTSCEEEEE
T ss_pred CCcCCCeEEEEEECcCcccCCCCCCCc-ccceEEEEEEcCCCCc--cCEEecCCEEEEEEcCCCEEEEEEcCCCceEEEE
Confidence 466 888888776532 2222 2346666677888754 5552 589999999996 6899999888776766
Q ss_pred E----CCCC---EEEecCCCeeEEEecCCccEEEEEEeeCCCCcceehhhhhhcCCCCCCHHHHHhhcCCCHHHHHHHH
Q 040384 140 V----TAGM---LFLIPRGLVHFQLNVGKENVLFFPSFNSQLPGTQFVHSSLFNTTPPIPNEVLTKTFLVGDEVINAIK 211 (224)
Q Consensus 140 l----~~GD---v~vvP~G~~H~~~N~G~~~a~~~~~~~s~~pg~~~~~~~lf~~~p~~p~evla~af~v~~~~v~~l~ 211 (224)
| .+|+ -++||+|.+..... | ...+++.. -.||+..-...+ .+.+-|.+.|.--++.|++|-
T Consensus 101 LG~d~~~Ge~~pQ~vVP~G~WqaA~~-~--~~~LVsct--VaPGF~f~dfel------~~~~~L~~~~P~~~~~I~~lt 168 (172)
T 3loi_A 101 LGNPLEHPEARHQVVVPRRVWFAQEV-D--GYCLASVL--VAPGFDFKDFSL------GKREELIKEYPQHRDVIMRCT 168 (172)
T ss_dssp ESCTTTSTTCBSEEEECTTCEEEEEE-S--SEEEEEEE--EESCCCGGGCEE------CCHHHHHHHCGGGHHHHHHTS
T ss_pred eCCCcccCCcceEEEECCCEEEEEEe-C--CcEEEEEE--EcCCccchhcEE------cCHHHHHHHCchHHHHHHHhc
Confidence 6 4678 78999999877665 3 23333322 235554433222 456667777776677777764
No 166
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=92.79 E-value=0.68 Score=33.51 Aligned_cols=61 Identities=11% Similarity=0.049 Sum_probs=45.2
Q ss_pred EEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEec
Q 040384 93 STNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNV 159 (224)
Q Consensus 93 s~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~ 159 (224)
....-.|.||- .+....+.|++-|++|++++.+- |....+++++||.|.+|.+.-.-++..
T Consensus 24 ~~TvGVm~pGe---ytF~T~~~E~M~vvsG~~~V~lp---g~~ew~~~~aGesF~Vpans~F~l~v~ 84 (94)
T 2oyz_A 24 DVSVGVMLPGE---YTFGTQAPERMTVVKGALVVKRV---GEADWTTYSSGESFDVEGNSSFELQVK 84 (94)
T ss_dssp EEEEEEECSEE---EEEEESSCEEEEEEESEEEEEET---TCSSCEEEETTCEEEECSSEEEEEEES
T ss_pred CEEEEEEeceE---EEEcCCCeEEEEEEEeEEEEEcC---CCCcCEEECCCCEEEECCCCEEEEEEc
Confidence 33444567765 34455689999999999999873 322378999999999999987666543
No 167
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=92.44 E-value=0.22 Score=46.63 Aligned_cols=65 Identities=20% Similarity=0.256 Sum_probs=48.9
Q ss_pred EEEeC-CcccCceecCCCC-ceEEEEeCeEEEEEEeCCC-------------------------eEEEEEECCCCEEEec
Q 040384 97 VDLAV-GGINPPHLHPRSS-ESSIVIRGTVLVGIITTDN-------------------------VFYSKVVTAGMLFLIP 149 (224)
Q Consensus 97 v~l~p-gg~~~pH~Hp~a~-Ei~yVl~G~~~v~~v~~~~-------------------------~~~~~~l~~GDv~vvP 149 (224)
+-+.| |+....|.-+.++ -+.+|++|+=+.-++.|.. +.+...+++||+++||
T Consensus 300 ~lmg~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~w~~s~~~~~wfgd~l~~~~~~v~l~pGEtlfIP 379 (528)
T 3pur_A 300 CLAGMAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVIKEGQTLLIP 379 (528)
T ss_dssp EEEECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSSCCSCCGGGGTTTCCEEEEEETTCEEEEC
T ss_pred EEEeCCCCCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhhhccCCchhhhhcccccccEEEEEECCCCEEEec
Confidence 44444 5566788887765 4667999998887776541 2246789999999999
Q ss_pred CCCeeEEEecCC
Q 040384 150 RGLVHFQLNVGK 161 (224)
Q Consensus 150 ~G~~H~~~N~G~ 161 (224)
.|.+|+++|..+
T Consensus 380 sGW~HaV~tleD 391 (528)
T 3pur_A 380 AGWIHAVLTPVD 391 (528)
T ss_dssp TTCEEEEEEEEE
T ss_pred CCceEEEecCCC
Confidence 999999999754
No 168
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=92.43 E-value=0.29 Score=40.32 Aligned_cols=73 Identities=23% Similarity=0.255 Sum_probs=45.4
Q ss_pred EEEEEeCCcccCceecCCCC--ceEEEEe--CeEEEEEEeCC------------------CeEEEEEECCCCEEEecCCC
Q 040384 95 NRVDLAVGGINPPHLHPRSS--ESSIVIR--GTVLVGIITTD------------------NVFYSKVVTAGMLFLIPRGL 152 (224)
Q Consensus 95 ~rv~l~pgg~~~pH~Hp~a~--Ei~yVl~--G~~~v~~v~~~------------------~~~~~~~l~~GDv~vvP~G~ 152 (224)
=...+++|+...+|.|+++. -++|+-. +.+.+.|.++. .......-++||+++||.-+
T Consensus 106 W~~~~~~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFpS~l 185 (216)
T 2rg4_A 106 WINILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWESWL 185 (216)
T ss_dssp EEEEECTTCCEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEETTS
T ss_pred EEEEcCCCCcccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEECCCC
Confidence 34567889999999998642 2334433 22334444542 11124566999999999999
Q ss_pred eeEEEe-cCCccEEEE
Q 040384 153 VHFQLN-VGKENVLFF 167 (224)
Q Consensus 153 ~H~~~N-~G~~~a~~~ 167 (224)
.|.+.- .++++-+-+
T Consensus 186 ~H~V~p~~~~~~RiSI 201 (216)
T 2rg4_A 186 RHEVPMNMAEEDRISV 201 (216)
T ss_dssp CEEECCCCSSSCEEEE
T ss_pred EEeccCCCCCCCEEEE
Confidence 999864 344443333
No 169
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=91.31 E-value=5.3 Score=32.75 Aligned_cols=148 Identities=16% Similarity=0.137 Sum_probs=85.7
Q ss_pred CccCCCeeeeccCCCcccCCCCceEEEeecccC----CC--Cc--------ccc-EEEEEEEEeCCc-ccCceecCCCCc
Q 040384 52 EVTSDDFFFDLSEEGNLSNAFGRAVTEGNVHEF----PG--VN--------TQG-ISTNRVDLAVGG-INPPHLHPRSSE 115 (224)
Q Consensus 52 ~vt~~df~f~l~~~~~~~~~~g~~~~~~~~~~~----P~--l~--------~~g-is~~rv~l~pgg-~~~pH~Hp~a~E 115 (224)
..++++++=.|.-.+ .+.||..++...... +. +. ... .+....-|.+++ ....|-- ++.|
T Consensus 27 ~~~a~~lI~~L~L~P---HPEGG~yrET~Rs~~~~~~~~~~~~~~~~~~~~~R~~~TaIYfLL~~~~~~S~wHRv-~sdE 102 (203)
T 1xe7_A 27 PSSLQQLINDWQLIK---HREGGYFKETDRSPYTMEVEKPVNGGSGNTEMVTRNQSTLIYYLLTPDSPIGKFHKN-INRI 102 (203)
T ss_dssp CHHHHHHHHHHTCEE---CTTSSEEEEEEECSCEEEECCCC--------CEEEESCEEEEEEEBTTBCEEEEEEE-SSCE
T ss_pred CCCHHHHHHHcCCcc---CCCCceEEEEEecccccccCccccccccccCCCCccceeEEEEEEcCCCCcccceee-CCCE
Confidence 445555443332222 568998888775532 11 11 112 345555566675 4544444 5899
Q ss_pred eEEEEeCeEEEEEEeCCCeEEEEEECC----CC--EEEecCCCeeEEEec-CCcc--EEEEEEeeCCCCcceehhhhhhc
Q 040384 116 SSIVIRGTVLVGIITTDNVFYSKVVTA----GM--LFLIPRGLVHFQLNV-GKEN--VLFFPSFNSQLPGTQFVHSSLFN 186 (224)
Q Consensus 116 i~yVl~G~~~v~~v~~~~~~~~~~l~~----GD--v~vvP~G~~H~~~N~-G~~~--a~~~~~~~s~~pg~~~~~~~lf~ 186 (224)
+.+-..|....-++.++|+..+..|.. |+ -++||+|.+...... +.+- ..+++.. -.||+..-...+
T Consensus 103 iW~~h~G~p~~~li~~dg~~~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~~~~~~~~~~tLVgCt--VaPGFdF~dFel-- 178 (203)
T 1xe7_A 103 IHILQRGKGQYVLVYPDGQVKSFKVGFDYKNGEVSQWVVPGGVFKASFLLPNEEFDNGFLISEV--VVPGFDFEDHTF-- 178 (203)
T ss_dssp EEEEEEECEEEEEECTTSCEEEEEESSCGGGTCBSEEEECTTCEEEEEECCCTTTTTCEEEEEE--ESSCCCGGGEEE--
T ss_pred EEEEEcCCccEEEEcCCCCEEEEEeCCCcccCcccEEEEcCCEEEEeEecCCCCcccceEEEEE--ecCCccchhcEe--
Confidence 999999966656778888766666643 55 489999988776544 2222 1344332 236654433222
Q ss_pred CCCCCCHH-HHHhhcCCCHHHHHHHHhc
Q 040384 187 TTPPIPNE-VLTKTFLVGDEVINAIKAA 213 (224)
Q Consensus 187 ~~p~~p~e-vla~af~v~~~~v~~l~~~ 213 (224)
.+.+ -|.+-|. ++.++.|+-.
T Consensus 179 ----~~~~~~L~~~~P--~~~~~~l~~l 200 (203)
T 1xe7_A 179 ----LKGEDELKHLVG--PEKAAELAFL 200 (203)
T ss_dssp ----CCHHHHHHHHHC--HHHHHHTGGG
T ss_pred ----cCCcHHHHHHCC--HHHHHHHHHH
Confidence 4455 5555564 7888887643
No 170
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=90.55 E-value=1.3 Score=38.26 Aligned_cols=75 Identities=20% Similarity=0.234 Sum_probs=48.5
Q ss_pred CccccEEEEEEEEeCCc---ccCceecCCCCceEEEEe----CeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEec
Q 040384 87 VNTQGISTNRVDLAVGG---INPPHLHPRSSESSIVIR----GTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNV 159 (224)
Q Consensus 87 l~~~gis~~rv~l~pgg---~~~pH~Hp~a~Ei~yVl~----G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~ 159 (224)
++.-.+-+..-.+.||| ..|||.|.+..|..|--+ |. .++++.+.++.....++-||++++|....|. -.
T Consensus 175 ~~~~qllmg~evltpgg~WSSyPpHkHDrr~EeyyYF~l~~~gf-v~q~~g~p~Etrhi~V~n~daVlvP~wh~h~--~~ 251 (282)
T 1xru_A 175 LETCQLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDAC-VFHMMGQPQETRHIVMHNEQAVISPSWSIHS--GV 251 (282)
T ss_dssp CCCSSCEEEEEEECTTCCEESCSEEECTTEEEEEEEESCCTTCC-EEEEEEETTEEEEEEECSSEEEEECTTCEEE--EE
T ss_pred CchhhEEEEEEEEeCCCCcCCCCCccCCCCceEEEEEEeCCCCE-EEEEeCCCCCeeEEEEECCCEEEeCCCCCCC--CC
Confidence 34345667777888888 369999977666666443 33 3444443344344578999999999656666 34
Q ss_pred CCccE
Q 040384 160 GKENV 164 (224)
Q Consensus 160 G~~~a 164 (224)
|.+.-
T Consensus 252 G~~~Y 256 (282)
T 1xru_A 252 GTKAY 256 (282)
T ss_dssp ESSCC
T ss_pred Cccce
Confidence 66554
No 171
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=90.48 E-value=1.1 Score=33.31 Aligned_cols=67 Identities=18% Similarity=0.154 Sum_probs=48.6
Q ss_pred EEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEEE
Q 040384 97 VDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPS 169 (224)
Q Consensus 97 v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~ 169 (224)
-.|.||- .+.+....+.|+.-|++|++++.+- |...++++++|+.|.+|.+.-.-++.. ++...++.
T Consensus 42 GVm~PGe-~~YtF~T~~~E~MevvsG~l~V~Lp---g~~eW~~~~aGesF~VpanssF~lkv~--~~~~Y~C~ 108 (111)
T 3hqx_A 42 GVILPTE-QPLTFETHVPERMEIISGECRVKIA---DSTESELFRAGQSFYVPGNSLFKIETD--EVLDYVCH 108 (111)
T ss_dssp EEECCCS-SCEEEECSSCEEEEEEESEEEEEET---TCSSCEEEETTCEEEECTTCEEEEECS--SCEEEEEE
T ss_pred EEEeccc-cceEEcCCCcEEEEEEEeEEEEEcC---CcccCEEeCCCCEEEECCCCcEEEEEC--cceeEEEE
Confidence 4567762 2356667789999999999999873 322478999999999999988766543 34444443
No 172
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=89.04 E-value=1.7 Score=34.18 Aligned_cols=125 Identities=14% Similarity=0.027 Sum_probs=76.2
Q ss_pred EEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCe-EEEEEECCCCEEEec-----CC--CeeEEEecCCccEEE
Q 040384 95 NRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNV-FYSKVVTAGMLFLIP-----RG--LVHFQLNVGKENVLF 166 (224)
Q Consensus 95 ~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~-~~~~~l~~GDv~vvP-----~G--~~H~~~N~G~~~a~~ 166 (224)
....+++|..+-.. ......+.+|++|.+++...+++|+ .....+.+||++.+. .+ ..+..... ++..+
T Consensus 27 ~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~a~--~~~~~ 103 (220)
T 3dv8_A 27 ITQHVKKGTIIHNG-NMDCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMCLLSASCIMRSIQFEVTIEAE--KDTDL 103 (220)
T ss_dssp EEEEECTTCEEEEG-GGCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESGGGGGGCTTCCCCCEEEES--SCEEE
T ss_pred ceEEeCCCCEEECC-CCCcceEEEEEeceEEEEEECCCCCEEEEEecCCCCeeehhHHHHhCCCCCceEEEEe--eeeEE
Confidence 35667777765322 2235789999999999998887765 345678999996321 12 22223332 34444
Q ss_pred EEEee-------CCCCccee----------------------------hhh------hhhcC-CCCCCHHHHHhhcCCCH
Q 040384 167 FPSFN-------SQLPGTQF----------------------------VHS------SLFNT-TPPIPNEVLTKTFLVGD 204 (224)
Q Consensus 167 ~~~~~-------s~~pg~~~----------------------------~~~------~lf~~-~p~~p~evla~af~v~~ 204 (224)
+.+=. ..+|.... ++. ...+. .-.++.+-||...|++.
T Consensus 104 ~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~t~~~lA~~lg~sr 183 (220)
T 3dv8_A 104 WIIPAEIYKGIMKDSAPVANYTNELMATRFSDVMWLIEQIMWKSLDKRVASFLLEETSIEGTNELKITHETIANHLGSHR 183 (220)
T ss_dssp EEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTSSEECCCHHHHHHHHTCCH
T ss_pred EEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcCCceecCCHHHHHHHhCCCH
Confidence 43211 12333210 000 11110 00288999999999999
Q ss_pred HHHHHHHhccCCCcceec
Q 040384 205 EVINAIKAAITSAQLGHR 222 (224)
Q Consensus 205 ~~v~~l~~~~~~~~~i~r 222 (224)
+.+.++.+.+.+.++|..
T Consensus 184 ~tvsR~l~~L~~~g~I~~ 201 (220)
T 3dv8_A 184 EVITRMLRYFQVEGLVKL 201 (220)
T ss_dssp HHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHHCCCEEe
Confidence 999999999888888754
No 173
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=88.58 E-value=1.1 Score=40.23 Aligned_cols=58 Identities=16% Similarity=0.158 Sum_probs=41.9
Q ss_pred cEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEE
Q 040384 91 GISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQ 156 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~ 156 (224)
.+++.++++.++.. +.-.++..++.|++|++++.. +++ ...|++||.+++|.+...+.
T Consensus 323 ~F~v~~~~l~~~~~---~~~~~~~~il~v~~G~~~l~~---~~~--~~~l~~G~~~fvpa~~~~~~ 380 (394)
T 2wfp_A 323 DFAFSLHDLALQET---SIGQHSAAILFCVEGEAVLRK---DEQ--RLVLKPGESAFIGADESPVN 380 (394)
T ss_dssp SCEEEEEECCSSCE---EECCSSCEEEEEEEEEEEEEE---TTE--EEEECTTCEEEECGGGCCEE
T ss_pred EEEEEEEEEcCCeE---EecCCCcEEEEEEeceEEEEE---CCe--EEEEccCcEEEEeCCCceEE
Confidence 57788888875522 222256789999999998763 333 57999999999999864443
No 174
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=88.39 E-value=2 Score=33.95 Aligned_cols=122 Identities=10% Similarity=0.023 Sum_probs=75.5
Q ss_pred EEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCe-EEEEEECCCCEEEecCCCeeEEEecCCccEEEEEEee--
Q 040384 95 NRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNV-FYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSFN-- 171 (224)
Q Consensus 95 ~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~-~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~~-- 171 (224)
....+++|..+-.. ...+..+.+|++|.+++. .+++|+ .....+.+||++- ....+..... ++..++.+=.
T Consensus 24 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~fG--~~~~~~~~A~--~~~~v~~i~~~~ 97 (222)
T 1ft9_A 24 RSKIHAKGSLVCTG-EGDENGVFVVVDGRLRVY-LVGEEREISLFYLTSGDMFC--MHSGCLVEAT--ERTEVRFADIRT 97 (222)
T ss_dssp EEEEECTTCEEECT-TCCCCCEEEEEESEEEEE-EEETTEEEEEEEEETTCEEE--SCSSCEEEES--SCEEEEEECHHH
T ss_pred cEEEECCCCEEECC-CCCCCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEec--CCCCEEEEEc--cceEEEEEeHHH
Confidence 45667777765322 223567999999999995 666665 3456889999998 3333344433 3444443211
Q ss_pred -----CCCCccee----------------------------hhhhhh------cC--------CCCCCHHHHHhhcCCCH
Q 040384 172 -----SQLPGTQF----------------------------VHSSLF------NT--------TPPIPNEVLTKTFLVGD 204 (224)
Q Consensus 172 -----s~~pg~~~----------------------------~~~~lf------~~--------~p~~p~evla~af~v~~ 204 (224)
..+|.... ++..+. +. ...++.+-||...|++.
T Consensus 98 ~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~~t~~~lA~~lG~sr 177 (222)
T 1ft9_A 98 FEQKLQTCPSMAWGLIAILGRALTSCMRTIEDLMFHDIKQRIAGFFIDHANTTGRQTQGGVIVSVDFTVEEIANLIGSSR 177 (222)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTCBCCCSCC--CCCCEECCCHHHHHHHHCSCH
T ss_pred HHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCcEEEeccCCHHHHHHHhCCcH
Confidence 12444311 001110 00 01278999999999999
Q ss_pred HHHHHHHhccCCCcceec
Q 040384 205 EVINAIKAAITSAQLGHR 222 (224)
Q Consensus 205 ~~v~~l~~~~~~~~~i~r 222 (224)
+++.++.+.+.+.++|.+
T Consensus 178 ~tvsR~l~~L~~~g~I~~ 195 (222)
T 1ft9_A 178 QTTSTALNSLIKEGYISR 195 (222)
T ss_dssp HHHHHHHHHHHHTTSSEE
T ss_pred HHHHHHHHHHHHCCcEEE
Confidence 999999998888888754
No 175
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=87.77 E-value=2.4 Score=36.95 Aligned_cols=58 Identities=19% Similarity=0.210 Sum_probs=41.8
Q ss_pred cEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEE
Q 040384 91 GISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQ 156 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~ 156 (224)
-+++.++++..+... ...+...++.|++|++++.. +++ ...|++||.+++|++.-.+.
T Consensus 250 ~F~~~~~~~~~~~~~---~~~~~~~il~v~~G~~~l~~---~~~--~~~l~~G~~~~vpa~~~~~~ 307 (319)
T 1qwr_A 250 YFSVYKWDINGEAEM---AQDESFLICSVIEGSGLLKY---EDK--TCPLKKGDHFILPAQMPDFT 307 (319)
T ss_dssp SCEEEEEEEEEEEEE---CCCSSCEEEEEEEEEEEEEE---TTE--EEEEETTCEEEECTTCCCEE
T ss_pred EEEEEEEEECCceEE---ccCCccEEEEEEcCeEEEEE---CCE--EEEEcCCcEEEEeCCCceEE
Confidence 467778887744322 22356789999999998864 344 56899999999999874443
No 176
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=87.40 E-value=1.1 Score=33.18 Aligned_cols=56 Identities=18% Similarity=0.049 Sum_probs=43.3
Q ss_pred EEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEe
Q 040384 97 VDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLN 158 (224)
Q Consensus 97 v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N 158 (224)
-.|.||- .+....+.|++-|++|++++.+- |...++++++||.|.+|.+.-.-++.
T Consensus 41 GVm~PGe---Y~F~T~~~E~MevvsG~l~V~Lp---G~~eW~~~~aGesF~VpanssF~lkv 96 (106)
T 3eo6_A 41 TLLHPGV---YTLSSEVAETIRVLSGMAYYHAE---GANDVQELHAGDSMVIPANQSYRLEV 96 (106)
T ss_dssp EEECSEE---EEECCSSCEEEEEEEEEEEEECT---TCSSCEEEETTCEEEECSSSCEEEEE
T ss_pred EEEeeeE---EEecCCCcEEEEEEEeEEEEECC---CCccCEEECCCCEEEECCCCcEEEEE
Confidence 4566763 45666789999999999999872 32247899999999999998766653
No 177
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=87.24 E-value=2.7 Score=38.40 Aligned_cols=77 Identities=14% Similarity=0.145 Sum_probs=47.1
Q ss_pred cEEEEEEEEe--CCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEec---CCccEE
Q 040384 91 GISTNRVDLA--VGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNV---GKENVL 165 (224)
Q Consensus 91 gis~~rv~l~--pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~---G~~~a~ 165 (224)
.+++.++++. +++... ........+++|++|++++.. .+++.....|++||++++|.+..-.+.+. +.+.+.
T Consensus 356 eF~v~~~~~~~~~~~~~~-~~~~~~~~illv~~G~g~i~~--~~~~~~~~~l~~G~~~fvpa~~~~~i~g~~~~~~~~~~ 432 (440)
T 1pmi_A 356 EFSVLQTIFDKSKGGKQV-IEGLNGPSIVIATNGKGTIQI--TGDDSTKQKIDTGYVFFVAPGSSIELTADSANQDQDFT 432 (440)
T ss_dssp SCEEEEEECCTTTCCEEE-ECCCSSCEEEEEEESEEEEEE--TTCGGGCEEEETTCEEEECTTCCEEEEECSSCCSSCCE
T ss_pred eEEEEEEEecCCCCceeE-EecCCCcEEEEEEeCeEEEEe--CCcccceEEeccCCEEEEeCCCcEEEEEecccCCCcEE
Confidence 5788888887 342211 112246789999999999875 12210004899999999999843334443 134455
Q ss_pred EEEEe
Q 040384 166 FFPSF 170 (224)
Q Consensus 166 ~~~~~ 170 (224)
++.++
T Consensus 433 ~~~a~ 437 (440)
T 1pmi_A 433 TYRAF 437 (440)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55443
No 178
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=86.63 E-value=2.5 Score=31.76 Aligned_cols=62 Identities=16% Similarity=0.077 Sum_probs=41.6
Q ss_pred cccCceecCCC-CceEEEEeCeEEEEEEeCCCe---EEEEEECCCCEEEecCCCeeEEEecCCccEEE
Q 040384 103 GINPPHLHPRS-SESSIVIRGTVLVGIITTDNV---FYSKVVTAGMLFLIPRGLVHFQLNVGKENVLF 166 (224)
Q Consensus 103 g~~~pH~Hp~a-~Ei~yVl~G~~~v~~v~~~~~---~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~ 166 (224)
++...|.-... -..+-|++|+++....++++. .....+.+|+.-++|+..+|.+.-.+ ++.+
T Consensus 27 ~l~~~HnTK~GtWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~sd--D~~f 92 (119)
T 3dl3_A 27 ALLTHHNTAVDVFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIELSD--DAQF 92 (119)
T ss_dssp HHHSSBCCCTTEEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEECT--TCEE
T ss_pred HHHhccCCCCcEEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEECC--CeEE
Confidence 44445533221 234579999999887664432 23468899999999999999999333 4454
No 179
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=86.58 E-value=6.2 Score=33.92 Aligned_cols=78 Identities=12% Similarity=0.026 Sum_probs=50.2
Q ss_pred cccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEE
Q 040384 89 TQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFP 168 (224)
Q Consensus 89 ~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~ 168 (224)
...+.+..+.|++|+.......+...-++||++|++.++ +++ ....+.++.+++...|..-.+.+.+.+++.++.
T Consensus 166 ~~~~~~~~~~l~~g~~~~~~l~~~~~~~lyv~~G~v~v~----g~~-~~~~~~~~~~~~l~~gd~~~i~~~a~~~a~~LL 240 (290)
T 1j1l_A 166 RTPTLYLDFKLDPGAKHSQPIPKGWTSFIYTISGDVYIG----PDD-AQQKIEPHHTAVLGEGDSVQVENKDPKRSHFVL 240 (290)
T ss_dssp SSCEEEEEEEECTTCEEEEECCTTCEEEEEEEESCEEES----CTT-SCEEECTTEEEEECSCSEEEEECCSSSCEEEEE
T ss_pred cCCcEEEEEEECCCCEEEeecCCCCEEEEEEEeCeEEEC----Ccc-cceeccCceEEEecCCCEEEEEEcCCCCcEEEE
Confidence 346888899999999774443334457899999999874 110 013566777777776665555554455666654
Q ss_pred Eee
Q 040384 169 SFN 171 (224)
Q Consensus 169 ~~~ 171 (224)
+-.
T Consensus 241 l~G 243 (290)
T 1j1l_A 241 IAG 243 (290)
T ss_dssp EEE
T ss_pred EEc
Confidence 433
No 180
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=86.45 E-value=3.4 Score=35.67 Aligned_cols=68 Identities=15% Similarity=0.161 Sum_probs=37.4
Q ss_pred CccccEEEEEEEEeCCcc---cCceecCCCCceEEEEe----CeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeE
Q 040384 87 VNTQGISTNRVDLAVGGI---NPPHLHPRSSESSIVIR----GTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHF 155 (224)
Q Consensus 87 l~~~gis~~rv~l~pgg~---~~pH~Hp~a~Ei~yVl~----G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~ 155 (224)
+....+-+..-.+.|||. .|||.|.+..|..|--+ |. .+.+..+-++.....++-||++++|+|-.|.
T Consensus 175 ~~s~qllmg~evltpGg~WSSyPpHkHDrr~E~yyYF~l~p~~~-v~h~~g~pdEtrh~~V~n~daVlvP~wgyHp 249 (289)
T 1ywk_A 175 CESCQLQMGYTILEPGSAWNTMPCHTHERRMEAYVYFDMEEDTR-IFHMMGKPDETKHLVMSNEQAAISPSWSIHS 249 (289)
T ss_dssp CCCSSCEEEEEEECTTCCCCC--------CEEEEEEESCCTTCC-EEEEESSTTSCEEEEECTTEEEEECTTSCCC
T ss_pred CchheEEEEEEEEeCCCCcCCCCCccCCCCCeeEEEEEeCCCCe-EEEECCCCCceEEEEEECCCEEEeCCCcccC
Confidence 333455677778888883 58999987667665332 22 2222222233334678999999999998886
No 181
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=86.07 E-value=1.9 Score=36.12 Aligned_cols=68 Identities=10% Similarity=-0.030 Sum_probs=46.6
Q ss_pred ccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEEE
Q 040384 90 QGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFP 168 (224)
Q Consensus 90 ~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~ 168 (224)
..+.+..+.|++|+....-..++..-++||++|+++++ + ..+++||.+++..+..-.+.+. +++.++.
T Consensus 158 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~v~~G~v~v~-----g----~~l~~gd~~~~~~~~~l~l~a~--~~a~~Ll 225 (242)
T 1tq5_A 158 QDMELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTIN-----G----VKASTSDGLAIWDEQAISIHAD--SDSEVLL 225 (242)
T ss_dssp SSCEEEEEEECTTCEEEECCCTTCEEEEEEEESEEEET-----T----EEEETTCEEEEESCSCEEEEES--SSEEEEE
T ss_pred CCCEEEEEEECCCCEEEeecCCCcEEEEEEccCcEEEC-----C----EEeCCCCEEEECCCCeEEEEeC--CCCEEEE
Confidence 36788889999998764333334456799999998763 4 3699999999987654344442 3455443
No 182
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=85.81 E-value=3.8 Score=32.19 Aligned_cols=120 Identities=13% Similarity=0.149 Sum_probs=76.2
Q ss_pred EEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCe-EEEEEECCCCEEEecCCCeeEEEecCCccEEEEEEee--
Q 040384 95 NRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNV-FYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSFN-- 171 (224)
Q Consensus 95 ~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~-~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~~-- 171 (224)
....+++|..+-.- -..+..+.+|++|.+++ ..+++|+ .....+.+||++-.|. .+..... ++..++.+=.
T Consensus 28 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~-~~~~~G~~~~~~~~~~G~~~G~~~--~~~~~A~--~~~~v~~i~~~~ 101 (220)
T 2fmy_A 28 REQRYSKKAILYTP-NTERNLVFLVKSGRVRV-YLAYEDKEFTLAILEAGDIFCTHT--RAFIQAM--EDTTILYTDIRN 101 (220)
T ss_dssp EEEEECTTCEEECT-TCSSCEEEEEEESEEEE-EEECSSCEEEEEEEETTCEEESCS--SSEEEES--SSEEEEEEEHHH
T ss_pred heeEeCCCCEEECC-CCCCCeEEEEEecEEEE-EECCCCCEEEEEEcCCCCEeCCcc--ceEEEEc--CcEEEEEEeHHH
Confidence 45667777765321 22356899999999999 4666664 4457889999997732 2333333 3444443211
Q ss_pred -----CCCCccee----------------------------hhhhh----------------hcCCCCCCHHHHHhhcCC
Q 040384 172 -----SQLPGTQF----------------------------VHSSL----------------FNTTPPIPNEVLTKTFLV 202 (224)
Q Consensus 172 -----s~~pg~~~----------------------------~~~~l----------------f~~~p~~p~evla~af~v 202 (224)
..+|.... ++..+ +.- .++.+-||...|+
T Consensus 102 ~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~g~~~~~~~~~~~--~~t~~~lA~~lg~ 179 (220)
T 2fmy_A 102 FQNIVVEFPAFSLNMVKVLGDLLKNSLTIINGLVFKDARLRLAEFLVQAAMDTGLKVPQGIKLEL--GLNTEEIALMLGT 179 (220)
T ss_dssp HHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCEEETTEEEEEC--SSCHHHHHHHHTS
T ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhCCCCCCcEEEec--cCCHHHHHHHhCC
Confidence 13443310 00000 111 3899999999999
Q ss_pred CHHHHHHHHhccCCCcceec
Q 040384 203 GDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 203 ~~~~v~~l~~~~~~~~~i~r 222 (224)
+.+++.++.+.+.+.++|.+
T Consensus 180 sr~tvsR~l~~l~~~g~I~~ 199 (220)
T 2fmy_A 180 TRQTVSVLLNDFKKMGILER 199 (220)
T ss_dssp CHHHHHHHHHHHHHTTSEEE
T ss_pred cHHHHHHHHHHHHHCCCEEE
Confidence 99999999999988888865
No 183
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=85.51 E-value=5 Score=33.87 Aligned_cols=71 Identities=15% Similarity=0.038 Sum_probs=47.1
Q ss_pred ccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecCCccEEEE
Q 040384 90 QGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVGKENVLFF 167 (224)
Q Consensus 90 ~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~ 167 (224)
..+.+..+.|++|+........+. -++||++|+++++ +.++ ....|.+||.+++-.+..-.+.. .+++.++
T Consensus 180 ~~~~~~~~~L~~g~~~~~~~~~~~-~~l~v~~G~v~v~--g~~~--~~~~l~~gd~~~l~~~~~l~l~a--~~~a~~L 250 (256)
T 2vec_A 180 QQVWLHHIVLDKGESANFQLHGPR-AYLQSIHGKFHAL--THHE--EKAALTCGDGAFIRDEANITLVA--DSPLRAL 250 (256)
T ss_dssp SSCEEEEEEECTTCEEEEECSSSE-EEEEEEESCEEEE--ETTE--EEEEECTTCEEEEESCSEEEEEE--SSSEEEE
T ss_pred CCcEEEEEEECCCCEEEEecCCCe-EEEEEEECEEEEC--Cccc--cceEECCCCEEEECCCCeEEEEe--CCCCEEE
Confidence 367788889999987654444334 6889999998875 2111 23579999999997665433433 2345444
No 184
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=85.25 E-value=5 Score=34.21 Aligned_cols=56 Identities=13% Similarity=0.117 Sum_probs=42.0
Q ss_pred cccEEEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecC-C
Q 040384 89 TQGISTNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPR-G 151 (224)
Q Consensus 89 ~~gis~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~-G 151 (224)
...+.+..+.|++|+.......+...-++||++|+++++ +. ...+++||.+++.. |
T Consensus 164 ~~~~~~~~~~L~~g~~~~~~~~~~~~~~lyv~~G~v~v~-----g~--~~~l~~~d~~~~~~~~ 220 (277)
T 2p17_A 164 IVPVTMVEMIVEPGTTVVQDLPGHYNGFLYILEGSGVFG-----AD--NIEGKAGQALFFSRHN 220 (277)
T ss_dssp SSCEEEEEEEECTTCEEEEEEETTCEEEEEEEESEEEET-----TT--TEEEETTEEEEECCCC
T ss_pred CCCCEEEEEEECCCCEEEeccCCCCEEEEEEEeCeEEEC-----CC--ceEeCCCcEEEEcCCC
Confidence 347889999999999775444444457899999998763 31 14699999999985 6
No 185
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=83.54 E-value=5.8 Score=34.17 Aligned_cols=57 Identities=12% Similarity=0.104 Sum_probs=40.9
Q ss_pred cEEEEEEEEeCCcccCceecCCCC-ceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEE
Q 040384 91 GISTNRVDLAVGGINPPHLHPRSS-ESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQL 157 (224)
Q Consensus 91 gis~~rv~l~pgg~~~pH~Hp~a~-Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~ 157 (224)
-+++.++++..... +.. ++. .++.|++| +++.. +++ ...+++||.+++|++.-.+..
T Consensus 229 ~F~v~~~~~~~~~~---~~~-~~~~~il~v~~G-~~i~~---~~~--~~~l~~G~~~~ipa~~~~~~i 286 (300)
T 1zx5_A 229 NFGLEVVDVTGTAE---IKT-GGVMNILYAAEG-YFILR---GKE--TADLHRGYSCLVPASTDSFTV 286 (300)
T ss_dssp SEEEEEEEEEEEEE---EEC-CSBCEEEEEEES-CEEEE---SSS--EEEECTTCEEEECTTCCEEEE
T ss_pred eEEEEEEEECCceE---Eec-CCceEEEEEccc-EEEEe---CCe--EEEEccceEEEEeCCCceEEE
Confidence 47888888874222 233 566 89999999 88764 343 468999999999998755543
No 186
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=81.47 E-value=17 Score=28.36 Aligned_cols=88 Identities=13% Similarity=0.068 Sum_probs=61.7
Q ss_pred CCCCceEEEeecccCCCCccccEEEEEEEEeCCcccCceecC--CCCceEEEEeCe-EEEEEEeCCCeEEEEEE----CC
Q 040384 70 NAFGRAVTEGNVHEFPGVNTQGISTNRVDLAVGGINPPHLHP--RSSESSIVIRGT-VLVGIITTDNVFYSKVV----TA 142 (224)
Q Consensus 70 ~~~g~~~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~pH~Hp--~a~Ei~yVl~G~-~~v~~v~~~~~~~~~~l----~~ 142 (224)
.+.||..++.......+-+. -.+....-|.+|... |||. ++.|+.+-..|. +++.+..++++..+.+| .+
T Consensus 19 HPEGG~yrEt~Rs~~~~~R~-~~TaIYfLL~~g~~S--~wHRv~~sdEiW~~h~G~pL~l~~~~~dg~~~~~~LG~d~~~ 95 (154)
T 1znp_A 19 HPEGGFYHQTFRDKAGGERG-HSTAIYYLLEKGVRS--HWHRVTDAVEVWHYYAGAPIALHLSQDGREVQTFTLGPAILE 95 (154)
T ss_dssp CTTSSEEEEEEECSSSTTTC-SCEEEEEEEESSCCE--EEEEETTSCEEEEEEEESCEEEEEESSSSCCEEEEESSCTTT
T ss_pred CCCCccEEEEEeCCCCCCCc-ceeEEEEEecCCCCC--cceeccCCCEEEEeECCCCEEEEEEcCCCcEEEEEeCCCccc
Confidence 56899999888765433332 245555567777654 5653 589999999987 78888887776555655 45
Q ss_pred CCE--EEecCCCeeEEEecC
Q 040384 143 GML--FLIPRGLVHFQLNVG 160 (224)
Q Consensus 143 GDv--~vvP~G~~H~~~N~G 160 (224)
|+. ++||+|........|
T Consensus 96 Ge~pQ~vVP~G~WqaA~~~g 115 (154)
T 1znp_A 96 GERPQVIVPANCWQSAESLG 115 (154)
T ss_dssp TEESEEEECTTCEEEEEESS
T ss_pred CcccEEEEcCCEEEEeeECC
Confidence 764 899999988776554
No 187
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=78.47 E-value=4.4 Score=29.28 Aligned_cols=52 Identities=21% Similarity=0.115 Sum_probs=36.8
Q ss_pred EEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCe-EEEEEECCCCEEE
Q 040384 95 NRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNV-FYSKVVTAGMLFL 147 (224)
Q Consensus 95 ~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~-~~~~~l~~GDv~v 147 (224)
....+++|..+-.. ...+..+.+|++|.+++...+++|+ .....+.+||++-
T Consensus 29 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 81 (149)
T 2pqq_A 29 SEVTLARGDTLFHE-GDPGDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELIG 81 (149)
T ss_dssp EEEEECTTCEEECT-TSEECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEES
T ss_pred eEEEeCCCCEEECC-CCCCCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEec
Confidence 45677777765321 1124679999999999988777664 4457889999873
No 188
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=75.18 E-value=3.1 Score=37.39 Aligned_cols=39 Identities=13% Similarity=0.073 Sum_probs=30.2
Q ss_pred EEEEECCCCEEEecCCCeeEEEecCCccEEEEEEeeCCC
Q 040384 136 YSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFPSFNSQL 174 (224)
Q Consensus 136 ~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~~~~s~~ 174 (224)
++..-++||.++||+|.+|.+.|..+.--+..-+++.++
T Consensus 293 ~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~spe~ 331 (392)
T 2ypd_A 293 CTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEH 331 (392)
T ss_dssp EEEEEETTCEEEECTTCEEEEEESSEEEEEEEEECCGGG
T ss_pred EEEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcChhh
Confidence 567779999999999999999999865444455555443
No 189
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=74.12 E-value=7.9 Score=30.00 Aligned_cols=125 Identities=15% Similarity=0.054 Sum_probs=76.3
Q ss_pred EEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCe-EEEEEECCCCEEEec----C-CCeeEEEecCCccEEEEE
Q 040384 95 NRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNV-FYSKVVTAGMLFLIP----R-GLVHFQLNVGKENVLFFP 168 (224)
Q Consensus 95 ~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~-~~~~~l~~GDv~vvP----~-G~~H~~~N~G~~~a~~~~ 168 (224)
....+++|..+-.. ...+..+.+|++|.+++...+++|+ .....+.+||++-.. . -..+..... ++..++.
T Consensus 23 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~--~~~~v~~ 99 (216)
T 4ev0_A 23 QRRLYPQGKPIFYQ-GDLGQALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEMSLLDEGERSASAVAV--EDTELLA 99 (216)
T ss_dssp EEEEECTTCEEECT-TCBCCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEECHHHHHHCCBCSSEEEES--SSEEEEE
T ss_pred eEEEeCCCCEEEeC-CCCCCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEeehhhcCCCCcceEEEEc--CCEEEEE
Confidence 34567777755322 2235689999999999998877764 445788999998431 1 112223332 3344433
Q ss_pred Eee-------CCCCccee----------------------------hhhhhh---cC----CCCCCHHHHHhhcCCCHHH
Q 040384 169 SFN-------SQLPGTQF----------------------------VHSSLF---NT----TPPIPNEVLTKTFLVGDEV 206 (224)
Q Consensus 169 ~~~-------s~~pg~~~----------------------------~~~~lf---~~----~p~~p~evla~af~v~~~~ 206 (224)
+-. ..+|.... ++..+. .. ...++.+-+|.-.|++.+.
T Consensus 100 i~~~~~~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~t~~~lA~~lg~sr~t 179 (216)
T 4ev0_A 100 LFREDYLALIRRLPLVAHNLAALLARRLREADLELDLLSFEEARNRVAYALLKLLRQGLGPLFQIRHHELAALAGTSRET 179 (216)
T ss_dssp EEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCHHHHHHHHTSCHHH
T ss_pred EcHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccCCCCCHHHHHHHhCCCHHH
Confidence 211 12333210 111111 00 1137899999999999999
Q ss_pred HHHHHhccCCCcceec
Q 040384 207 INAIKAAITSAQLGHR 222 (224)
Q Consensus 207 v~~l~~~~~~~~~i~r 222 (224)
+.++.+.+.+.++|.+
T Consensus 180 vsR~l~~l~~~g~I~~ 195 (216)
T 4ev0_A 180 VSRVLHALAEEGVVRL 195 (216)
T ss_dssp HHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHCCCEEe
Confidence 9999999998888854
No 190
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=73.07 E-value=9.2 Score=29.38 Aligned_cols=123 Identities=13% Similarity=0.078 Sum_probs=74.8
Q ss_pred EEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCe-EEEEEECCCCEEEecCC---------CeeEEEecCCccEE
Q 040384 96 RVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNV-FYSKVVTAGMLFLIPRG---------LVHFQLNVGKENVL 165 (224)
Q Consensus 96 rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~-~~~~~l~~GDv~vvP~G---------~~H~~~N~G~~~a~ 165 (224)
...+++|..+-. -...+..+.+|++|.+++...+++|+ .....+.+||++-.-.- ..+..... ++..
T Consensus 15 ~~~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~A~--~~~~ 91 (207)
T 2oz6_A 15 RRRYTAKSTIIY-AGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFEKEGSEQERSAWVRAK--VECE 91 (207)
T ss_dssp EEEECTTCEEEC-TTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEESCTTTCC-----CBCCSEEEES--SCEE
T ss_pred eEEECCCCEEEc-CCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCcccHHHhcCCCCCCCcceEEEEC--CcEE
Confidence 456777765522 22235679999999999988877664 34568899999843311 12223332 3334
Q ss_pred EEEEee--------CCCCccee----------------------------hhhhhh--cCC-----------CCCCHHHH
Q 040384 166 FFPSFN--------SQLPGTQF----------------------------VHSSLF--NTT-----------PPIPNEVL 196 (224)
Q Consensus 166 ~~~~~~--------s~~pg~~~----------------------------~~~~lf--~~~-----------p~~p~evl 196 (224)
++. ++ ..+|.... ++..+. ... -.++.+-|
T Consensus 92 v~~-i~~~~~~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~l 170 (207)
T 2oz6_A 92 VAE-ISYAKFRELSQQDSEILYTLGSQMADRLRKTTRKVGDLAFLDVTGRVARTLLDLCQQPDAMTHPDGMQIKITRQEI 170 (207)
T ss_dssp EEE-EEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHTTSTTCEEETTEEEEECCHHHH
T ss_pred EEE-ECHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCCceecccCHHHH
Confidence 332 22 12333210 001110 000 02788999
Q ss_pred HhhcCCCHHHHHHHHhccCCCcceec
Q 040384 197 TKTFLVGDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 197 a~af~v~~~~v~~l~~~~~~~~~i~r 222 (224)
|...|++.+.+.++.+.+.+.++|.+
T Consensus 171 A~~lg~sr~tvsR~l~~l~~~g~I~~ 196 (207)
T 2oz6_A 171 GRIVGCSREMVGRVLKSLEEQGLVHV 196 (207)
T ss_dssp HHHHTSCHHHHHHHHHHHHHTTSEEE
T ss_pred HHHhCCCHHHHHHHHHHHHHCCCEEe
Confidence 99999999999999999988888764
No 191
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=72.69 E-value=23 Score=30.10 Aligned_cols=69 Identities=10% Similarity=0.136 Sum_probs=45.6
Q ss_pred EEEEEEEEeCCcccCceecCCCCceE-EEEeCeEEEEEEeCCCeEEEEEECC--------CCEEEecCCCeeEEEecCCc
Q 040384 92 ISTNRVDLAVGGINPPHLHPRSSESS-IVIRGTVLVGIITTDNVFYSKVVTA--------GMLFLIPRGLVHFQLNVGKE 162 (224)
Q Consensus 92 is~~rv~l~pgg~~~pH~Hp~a~Ei~-yVl~G~~~v~~v~~~~~~~~~~l~~--------GDv~vvP~G~~H~~~N~G~~ 162 (224)
+++..+.|++|.......- + .|+. +.+.|++.+.+ +++.+...-++ .|.+++|+|.--.+...+
T Consensus 29 ~~f~~~~L~~Ge~~~~~~~-~-~E~~iv~l~G~~~V~~---~g~~~~~~g~R~svF~~~~p~~lYvp~g~~v~i~a~~-- 101 (270)
T 2qjv_A 29 VGFDVWQLXAGESITLPSD-E-RERCLVLVAGLASVXA---ADSFFYRIGQRMSPFERIPAYSVYLPHHTEAXVTAET-- 101 (270)
T ss_dssp CEEEEEEECTTCEEEECCS-S-EEEEEEEEESCEEEEE---TTEEEEEECCCSSGGGCSCCCEEEECSSCCEEEEESS--
T ss_pred eEEEEEEecCCCEEEecCC-C-cEEEEEEecceEEEEE---CCEEEeccccccccccCCCCcEEEECCCCEEEEEecC--
Confidence 6777888999998766554 3 3555 56789999886 45533222233 599999999954454443
Q ss_pred cEEEE
Q 040384 163 NVLFF 167 (224)
Q Consensus 163 ~a~~~ 167 (224)
++.+.
T Consensus 102 ~~~~~ 106 (270)
T 2qjv_A 102 DLELA 106 (270)
T ss_dssp SEEEE
T ss_pred CceEE
Confidence 45543
No 192
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=72.09 E-value=9.6 Score=29.81 Aligned_cols=125 Identities=11% Similarity=0.037 Sum_probs=76.6
Q ss_pred EEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCe-EEEEEECCCCEEEecC----C--CeeEEEecCCccEEEE
Q 040384 95 NRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNV-FYSKVVTAGMLFLIPR----G--LVHFQLNVGKENVLFF 167 (224)
Q Consensus 95 ~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~-~~~~~l~~GDv~vvP~----G--~~H~~~N~G~~~a~~~ 167 (224)
....+++|..+-.. ...+..+.+|++|.+++...+++|+ .....+.+||++-... + ..+..... ++..++
T Consensus 35 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~--~~~~v~ 111 (230)
T 3iwz_A 35 HRRRYPTRTDVFRP-GDPAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVGEMGLFIESDTREVILRTR--TQCELA 111 (230)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCGGGTSCCSBCCSEEEES--SCEEEE
T ss_pred eEEEeCCCCEEECC-CCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEEehhhhcCCCCceeEEEEc--CcEEEE
Confidence 35667777755322 2235689999999999998887765 3456789999985322 1 12223332 334433
Q ss_pred EEee-------CCC-----Cccee----------------------------hhhhhh--cC------CC-----CCCHH
Q 040384 168 PSFN-------SQL-----PGTQF----------------------------VHSSLF--NT------TP-----PIPNE 194 (224)
Q Consensus 168 ~~~~-------s~~-----pg~~~----------------------------~~~~lf--~~------~p-----~~p~e 194 (224)
.+=. ..+ |.... ++..+. .. .| .++.+
T Consensus 112 ~i~~~~~~~l~~~~~~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~lt~~ 191 (230)
T 3iwz_A 112 EISYERLQQLFQTSLSPDAPRILYAIGVQLSKRLLDTTRKASRLAFLDVTDRIVRTLHDLSKEPEAMSHPQGTQLRVSRQ 191 (230)
T ss_dssp EEEHHHHHHHHHTTTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHTTSTTCEEETTEEEEECCHH
T ss_pred EEeHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhCCCCCCCceecCCCHH
Confidence 2210 234 44310 001111 00 00 27899
Q ss_pred HHHhhcCCCHHHHHHHHhccCCCcceec
Q 040384 195 VLTKTFLVGDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 195 vla~af~v~~~~v~~l~~~~~~~~~i~r 222 (224)
-||.-.|++.+.+.++.+.+.+.++|.+
T Consensus 192 ~lA~~lg~sr~tvsR~l~~L~~~g~I~~ 219 (230)
T 3iwz_A 192 ELARLVGCSREMAGRVLKKLQADGLLHA 219 (230)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHhCCcHHHHHHHHHHHHHCCCEEE
Confidence 9999999999999999999998888864
No 193
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=71.97 E-value=8.4 Score=30.47 Aligned_cols=122 Identities=14% Similarity=0.031 Sum_probs=73.4
Q ss_pred EEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCe-EEEEEECCCCEEEec-----CCCeeEEEecCCccEEEEE
Q 040384 95 NRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNV-FYSKVVTAGMLFLIP-----RGLVHFQLNVGKENVLFFP 168 (224)
Q Consensus 95 ~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~-~~~~~l~~GDv~vvP-----~G~~H~~~N~G~~~a~~~~ 168 (224)
....+.+|..+-.. ...+..+.+|++|.+++...+++|+ .....+.+||++-.. .-..+..... ++..++.
T Consensus 35 ~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~a~--~~~~v~~ 111 (237)
T 3fx3_A 35 VWRSYDRGETLFLQ-EEKAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESFGEAVALRNTPYPVSAEAV--TPCEVMH 111 (237)
T ss_dssp EEEEECTTCEEECT-TSCCCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEECHHHHHHTCCCSSEEEES--SSEEEEE
T ss_pred EEEEECCCCEEEcC-CCccceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEechHHHhcCCCCCceEEEC--CceEEEE
Confidence 35667777765322 2235689999999999998877765 345678999988431 1112223332 3344332
Q ss_pred Eee-------CCCCccee----------------------------hhhhh------------hcCCCCCCHHHHHhhcC
Q 040384 169 SFN-------SQLPGTQF----------------------------VHSSL------------FNTTPPIPNEVLTKTFL 201 (224)
Q Consensus 169 ~~~-------s~~pg~~~----------------------------~~~~l------------f~~~p~~p~evla~af~ 201 (224)
+=. ..+|.... ++..+ +.- ++..+-||...|
T Consensus 112 i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~~~~~~~~~~~~~l--~~t~~~iA~~lg 189 (237)
T 3fx3_A 112 IPSPVFVSLMRRDPEICISILATTFGHLHSLVAQLEQLKAQTGAQRVAEFLLELCDCDTGACEVTL--PYDKMLIAGRLG 189 (237)
T ss_dssp EEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC-----EEEC--CSCTHHHHHHTT
T ss_pred EcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCCeEEEe--cCCHHHHHHHhC
Confidence 211 12333210 00111 111 245889999999
Q ss_pred CCHHHHHHHHhccCCCccee
Q 040384 202 VGDEVINAIKAAITSAQLGH 221 (224)
Q Consensus 202 v~~~~v~~l~~~~~~~~~i~ 221 (224)
++.+.+.++.+.+.+.+++.
T Consensus 190 ~sr~tvsR~l~~L~~~gi~~ 209 (237)
T 3fx3_A 190 MKPESLSRAFSRLKAAGVTV 209 (237)
T ss_dssp CCHHHHHHHHHHHGGGTEEC
T ss_pred CCHHHHHHHHHHHHHCCeEe
Confidence 99999999999988888643
No 194
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=71.90 E-value=8.9 Score=30.17 Aligned_cols=123 Identities=7% Similarity=-0.022 Sum_probs=74.9
Q ss_pred EEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCe-EEEEEECCCCEEEecC---CC--eeEEEecCCccEEEE
Q 040384 94 TNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNV-FYSKVVTAGMLFLIPR---GL--VHFQLNVGKENVLFF 167 (224)
Q Consensus 94 ~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~-~~~~~l~~GDv~vvP~---G~--~H~~~N~G~~~a~~~ 167 (224)
+....+++|..+-.. -..+..+.+|++|.+++...+++|+ .....+.+||++-... +. .+.... .++..++
T Consensus 29 ~~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a--~~~~~v~ 105 (231)
T 3e97_A 29 VTERNFQPDELVVEQ-DAEGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVGETAVLAHQERSASVRA--LTPVRTL 105 (231)
T ss_dssp EEEEEECTTCBCCCT-TCTTTCEEEECSSEEEEEEECC--CEEEEEEEESSEEESTTTTTCCCCCCEEEEE--SSCEEEE
T ss_pred cEEEEECCCCEEEeC-CCCCCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEeeHHHhCCCCceEEEEE--CCcEEEE
Confidence 346677888765432 2235789999999999988877664 4457889999874321 11 122222 2334433
Q ss_pred EEeeC--------CCCcce---------------------------ehh-------hh--------hhcCCCCCCHHHHH
Q 040384 168 PSFNS--------QLPGTQ---------------------------FVH-------SS--------LFNTTPPIPNEVLT 197 (224)
Q Consensus 168 ~~~~s--------~~pg~~---------------------------~~~-------~~--------lf~~~p~~p~evla 197 (224)
. ++. .+|... .++ .. .+.- .++.+-||
T Consensus 106 ~-i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~~~~~--~~t~~~iA 182 (231)
T 3e97_A 106 M-LHREHFELILRRHPRVLWNLAEMLARRVTFLNDELIAFGQNTEAALTHVFANLYRQRLAAGVPQPEVL--PLGTQDIM 182 (231)
T ss_dssp E-ECHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTCSSTTEE--CCCHHHHH
T ss_pred E-EeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHhcCCCCCCceEec--CCCHHHHH
Confidence 2 221 122210 000 00 1111 37899999
Q ss_pred hhcCCCHHHHHHHHhccCCCcceec
Q 040384 198 KTFLVGDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 198 ~af~v~~~~v~~l~~~~~~~~~i~r 222 (224)
.-.|++.+.+.++.+.+.+.++|..
T Consensus 183 ~~lg~sr~tvsR~l~~L~~~g~I~~ 207 (231)
T 3e97_A 183 ARTSSSRETVSRVLKRLEAHNILEV 207 (231)
T ss_dssp HHHTCCHHHHHHHHHHHHHTTSEEE
T ss_pred HHhCCcHHHHHHHHHHHHHCCcEEe
Confidence 9999999999999999888888764
No 195
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=71.31 E-value=11 Score=29.46 Aligned_cols=122 Identities=15% Similarity=0.076 Sum_probs=75.7
Q ss_pred EEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCe-EEEEEECCCCEEEec-----CCCeeEEEecCCccEEEEEE
Q 040384 96 RVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNV-FYSKVVTAGMLFLIP-----RGLVHFQLNVGKENVLFFPS 169 (224)
Q Consensus 96 rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~-~~~~~l~~GDv~vvP-----~G~~H~~~N~G~~~a~~~~~ 169 (224)
...+++|..+-. -...+..+.+|++|.+++...+++|+ .....+.+||++-.. ....+..... ++..++.+
T Consensus 31 ~~~~~~g~~i~~-~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~--~~~~v~~i 107 (227)
T 3d0s_A 31 PVDFPRGHTVFA-EGEPGDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTI--TEVRAVSM 107 (227)
T ss_dssp EEEECTTCEEEC-TTCCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCHHHHSCSCCSSEEEES--SCEEEEEE
T ss_pred EEEeCCCCEEEc-CCCcCCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEeeHHHcCCCCceeEEEEc--ccEEEEEE
Confidence 566777765522 12235678999999999988877664 345688999988421 1122233333 33443332
Q ss_pred ee-------CCCCccee----------------------------hhhhh----------------hcCCCCCCHHHHHh
Q 040384 170 FN-------SQLPGTQF----------------------------VHSSL----------------FNTTPPIPNEVLTK 198 (224)
Q Consensus 170 ~~-------s~~pg~~~----------------------------~~~~l----------------f~~~p~~p~evla~ 198 (224)
=. ..+|.... ++..+ +.- .++.+-||.
T Consensus 108 ~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~i~~--~~t~~~lA~ 185 (227)
T 3d0s_A 108 DRDALRSWIADRPEISEQLLRVLARRLRRTNNNLADLIFTDVPGRVAKQLLQLAQRFGTQEGGALRVTH--DLTQEEIAQ 185 (227)
T ss_dssp EHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHEEEETTEEEEEC--CCCHHHHHH
T ss_pred eHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCcCCCceEEcC--CCCHHHHHH
Confidence 10 23443210 00111 121 389999999
Q ss_pred hcCCCHHHHHHHHhccCCCcceec
Q 040384 199 TFLVGDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 199 af~v~~~~v~~l~~~~~~~~~i~r 222 (224)
..|++.+.+.++.+.+.+.++|.+
T Consensus 186 ~lg~sr~tvsR~l~~l~~~g~I~~ 209 (227)
T 3d0s_A 186 LVGASRETVNKALADFAHRGWIRL 209 (227)
T ss_dssp HHTSCHHHHHHHHHHHHHTTSEEE
T ss_pred HhCCcHHHHHHHHHHHHHCCCEEe
Confidence 999999999999999888888764
No 196
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=71.01 E-value=3.1 Score=35.92 Aligned_cols=44 Identities=18% Similarity=0.176 Sum_probs=34.6
Q ss_pred CceEEEEe-CeEEEEEEeCC-----------Ce------EEEEEECCCCEEEecCCCeeEEE
Q 040384 114 SESSIVIR-GTVLVGIITTD-----------NV------FYSKVVTAGMLFLIPRGLVHFQL 157 (224)
Q Consensus 114 ~Ei~yVl~-G~~~v~~v~~~-----------~~------~~~~~l~~GDv~vvP~G~~H~~~ 157 (224)
+|+.|++. .++..||-... ++ +....+++||.+++|+|.+|...
T Consensus 118 pE~~y~L~~~~~~~Gf~~~~~~~~~~~~l~~~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~ 179 (300)
T 1zx5_A 118 ESAWLVFNKGKAYAGFKEDVKIEELEEKLKEEDFDFKTLLNTFETTPYDTFVIRPGIPHAGE 179 (300)
T ss_dssp CEEEEECSSCEEEEEESSCCCHHHHHHHHTSSSCCGGGGEEEEECCTTCEEEECTTCCEEEE
T ss_pred cEEEEEcccHHHhhCCCCCCCHHHHHHHHHhCchhHHHHhceeECCCCCEEEcCCCCceEcC
Confidence 79999998 57778864321 22 45688999999999999999973
No 197
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=70.72 E-value=11 Score=28.90 Aligned_cols=124 Identities=10% Similarity=0.039 Sum_probs=75.4
Q ss_pred EEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCe-EEEEEECCCCEEEecC----C--CeeEEEecCCccEEEEE
Q 040384 96 RVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNV-FYSKVVTAGMLFLIPR----G--LVHFQLNVGKENVLFFP 168 (224)
Q Consensus 96 rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~-~~~~~l~~GDv~vvP~----G--~~H~~~N~G~~~a~~~~ 168 (224)
...+++|..+-.. ...+..+.+|++|.+++...+++|+ .....+.+||++-... + ..+..... ++..++.
T Consensus 21 ~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~--~~~~v~~ 97 (210)
T 3ryp_A 21 IHKYPSKSTLIHQ-GEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAK--TACEVAE 97 (210)
T ss_dssp EEEECTTCEEECT-TSBCCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCSSEEEES--SCEEEEE
T ss_pred EEEeCCCCEEECC-CCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHHhcCCCCceEEEEEC--CcEEEEE
Confidence 4566777654322 2235689999999999998877765 3456789999984321 1 22223332 3444443
Q ss_pred Eee-------CCCCccee----------------------------hhhhhh--cCC-----------CCCCHHHHHhhc
Q 040384 169 SFN-------SQLPGTQF----------------------------VHSSLF--NTT-----------PPIPNEVLTKTF 200 (224)
Q Consensus 169 ~~~-------s~~pg~~~----------------------------~~~~lf--~~~-----------p~~p~evla~af 200 (224)
+=. ..+|.... ++..+. ... -.++.+-||.-.
T Consensus 98 i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~iA~~l 177 (210)
T 3ryp_A 98 ISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIV 177 (210)
T ss_dssp EEHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHTTSTTCEEETTEEEEECCHHHHHHHH
T ss_pred EcHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcCcCCCCCceEeccCHHHHHHHh
Confidence 211 12343311 001110 000 027889999999
Q ss_pred CCCHHHHHHHHhccCCCcceec
Q 040384 201 LVGDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 201 ~v~~~~v~~l~~~~~~~~~i~r 222 (224)
|++.+++.++.+.+.+.++|..
T Consensus 178 g~sr~tvsR~l~~L~~~g~I~~ 199 (210)
T 3ryp_A 178 GCSRETVGRILKMLEDQNLISA 199 (210)
T ss_dssp TCCHHHHHHHHHHHHHTTSEEE
T ss_pred CCcHHHHHHHHHHHHHCCcEEe
Confidence 9999999999999988888764
No 198
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=70.71 E-value=9.9 Score=29.28 Aligned_cols=52 Identities=12% Similarity=-0.064 Sum_probs=37.6
Q ss_pred EEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCe-EEEEEECCCCEE
Q 040384 94 TNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNV-FYSKVVTAGMLF 146 (224)
Q Consensus 94 ~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~-~~~~~l~~GDv~ 146 (224)
+....+.+|..+-.- -..+..+.+|++|++++...+++|+ .....+.+||++
T Consensus 62 ~~~~~~~~ge~i~~~-G~~~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 62 MQCYAAPRDCQLLTE-GDPGDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAII 114 (187)
T ss_dssp CEEEEECTTCEEECT-TSCCCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEE
T ss_pred cEEEEeCCCCEEEcC-CCCCCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCee
Confidence 445677777765322 2235789999999999998887775 345688999987
No 199
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=69.93 E-value=6.9 Score=27.98 Aligned_cols=53 Identities=11% Similarity=0.108 Sum_probs=32.8
Q ss_pred EEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCe-EE---EEEECCCCEEE
Q 040384 94 TNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNV-FY---SKVVTAGMLFL 147 (224)
Q Consensus 94 ~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~-~~---~~~l~~GDv~v 147 (224)
+....+.+|..+-. -...+..+.+|++|++++...+++|+ .. ...+.+||++=
T Consensus 29 ~~~~~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~fG 85 (142)
T 3mdp_A 29 SEEKSFPTGSVIFK-ENSKADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIFG 85 (142)
T ss_dssp EEEEEECTTCEEEC-TTSBCCEEEEEEESCEEEECC---------CEEEEECTTCEEC
T ss_pred hcEEecCCCCEEEe-CCCCCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEec
Confidence 34566777775422 22235789999999999887666653 33 46789999884
No 200
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=69.20 E-value=13 Score=28.56 Aligned_cols=123 Identities=12% Similarity=0.121 Sum_probs=74.4
Q ss_pred EEEEeCCcccCceecCCC--CceEEEEeCeEEEEEEeCCCe-EEEEEECCCCEEEe----cCCCeeEEEecCCccEEEEE
Q 040384 96 RVDLAVGGINPPHLHPRS--SESSIVIRGTVLVGIITTDNV-FYSKVVTAGMLFLI----PRGLVHFQLNVGKENVLFFP 168 (224)
Q Consensus 96 rv~l~pgg~~~pH~Hp~a--~Ei~yVl~G~~~v~~v~~~~~-~~~~~l~~GDv~vv----P~G~~H~~~N~G~~~a~~~~ 168 (224)
...+++|..+-.. .... ..+.+|++|.+++...+++|+ .....+.+||++-. .....+..... ++..++.
T Consensus 7 ~~~~~~g~~i~~~-g~~~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A~--~~~~v~~ 83 (202)
T 2zcw_A 7 TVSFKAGDVILYP-GVPGPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQERIYFAEAA--TDVRLEP 83 (202)
T ss_dssp CEEECTTCEEECS-BSCCTTCCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECTHHHHTCCBCSEEEES--SCEEEEE
T ss_pred EEEECCCCEEECC-CCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeeehhcCCCCcceEEEEc--ccEEEEE
Confidence 3456666654322 2124 578999999999988877765 34567899998854 11122333333 3444444
Q ss_pred EeeCC-CCccee----------------------------hhhhhhc--C-----------CCCCCHHHHHhhcCCCHHH
Q 040384 169 SFNSQ-LPGTQF----------------------------VHSSLFN--T-----------TPPIPNEVLTKTFLVGDEV 206 (224)
Q Consensus 169 ~~~s~-~pg~~~----------------------------~~~~lf~--~-----------~p~~p~evla~af~v~~~~ 206 (224)
+ ... .|.... ++..+.. . ...++.+-||.-.|++.+.
T Consensus 84 i-~~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~lA~~lg~sr~t 162 (202)
T 2zcw_A 84 L-PENPDPELLKDLAQHLSQGLAEAYRRIERLATQRLKNRMAAALLELSETPLAHEEEGKVVLKATHDELAAAVGSVRET 162 (202)
T ss_dssp C-CSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHTTSTTEEEETTEEEEECCHHHHHHHHTCCHHH
T ss_pred E-hHhcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCcEEccCCCHHHHHHHhCCCHHH
Confidence 4 221 122210 0011110 0 0127889999999999999
Q ss_pred HHHHHhccCCCcceec
Q 040384 207 INAIKAAITSAQLGHR 222 (224)
Q Consensus 207 v~~l~~~~~~~~~i~r 222 (224)
+.++.+.+.+.++|.+
T Consensus 163 vsR~l~~L~~~g~I~~ 178 (202)
T 2zcw_A 163 VTKVIGELAREGYIRS 178 (202)
T ss_dssp HHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHCCCEEe
Confidence 9999999888888764
No 201
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=68.75 E-value=15 Score=29.44 Aligned_cols=126 Identities=13% Similarity=0.060 Sum_probs=77.2
Q ss_pred EEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeE-EEEEECCCCEEEe--cCCCeeEEEecCCccEEEEEEee
Q 040384 95 NRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVF-YSKVVTAGMLFLI--PRGLVHFQLNVGKENVLFFPSFN 171 (224)
Q Consensus 95 ~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~-~~~~l~~GDv~vv--P~G~~H~~~N~G~~~a~~~~~~~ 171 (224)
....+++|..+-.- -..+..+.+|++|.+++...+++|+. ....+.+||++-. -....+.... .++..++.+=.
T Consensus 33 ~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~l~~~~~~~~~A--~~~~~v~~i~~ 109 (250)
T 3e6c_C 33 LIRDFAKGSAVIMP-GEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATA--MEPTRTCWFSE 109 (250)
T ss_dssp EEEEECTTCEEECT-TCCCCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEECCCSCCSCCEEEEE--SSSEEEEEECH
T ss_pred eEEEECCCCEEECC-CCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEeeecCCCCceEEEE--cccEEEEEEcH
Confidence 45667777755322 22356899999999999988777653 4567899999853 1112222322 23344332210
Q ss_pred -------CCCCccee----------------------------hhhhh------hcC--------CCCCCHHHHHhhcCC
Q 040384 172 -------SQLPGTQF----------------------------VHSSL------FNT--------TPPIPNEVLTKTFLV 202 (224)
Q Consensus 172 -------s~~pg~~~----------------------------~~~~l------f~~--------~p~~p~evla~af~v 202 (224)
..+|.... ++..+ ++. ...++.+-||...|+
T Consensus 110 ~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~i~~~~t~~~iA~~lG~ 189 (250)
T 3e6c_C 110 KSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAEMNTYNPTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGEITGV 189 (250)
T ss_dssp HHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHCEEETTEEEEECCCCHHHHHHHHTC
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCcEecCCCCHHHHHHHhCC
Confidence 12343310 00111 110 113899999999999
Q ss_pred CHHHHHHHHhccCCCcceecC
Q 040384 203 GDEVINAIKAAITSAQLGHRP 223 (224)
Q Consensus 203 ~~~~v~~l~~~~~~~~~i~r~ 223 (224)
+.+++.++.+.+.+.++|.+.
T Consensus 190 sr~tvsR~l~~L~~~g~I~~~ 210 (250)
T 3e6c_C 190 HHVTVSRVLASLKRENILDKK 210 (250)
T ss_dssp CHHHHHHHHHHHHHTTSEEEC
T ss_pred cHHHHHHHHHHHHHCCCeEeC
Confidence 999999999999988888653
No 202
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=68.64 E-value=12 Score=29.94 Aligned_cols=126 Identities=6% Similarity=0.028 Sum_probs=77.4
Q ss_pred EEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCe-EEEEEECCCCEEEec---CCCe----eEEEecCCccEE
Q 040384 94 TNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNV-FYSKVVTAGMLFLIP---RGLV----HFQLNVGKENVL 165 (224)
Q Consensus 94 ~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~-~~~~~l~~GDv~vvP---~G~~----H~~~N~G~~~a~ 165 (224)
+....+++|..+-.- -..+..+.+|++|.+++...+++|+ .....+.+||++-.. .+.. ..... .++..
T Consensus 43 ~~~~~~~~ge~i~~~-G~~~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~G~~~~~~~~~~~~~~~~~A--~~~~~ 119 (243)
T 3la7_A 43 PVVETFERNKTIFFP-GDPAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFGVLSLLTGNKSDRFYHAVA--FTPVE 119 (243)
T ss_dssp CEEEEECTTCEEECT-TSBCCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEESCHHHHSSCCSBCCEEEEE--SSSEE
T ss_pred heeEEECCCCEEEcC-CCCCceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEcchHHhCCCCCcceEEEEE--ccceE
Confidence 346677888765322 2235689999999999998887775 345778999987432 1111 22222 23444
Q ss_pred EEEEee-------CCCCccee----------------------------hhhhhh------c--------CCCCCCHHHH
Q 040384 166 FFPSFN-------SQLPGTQF----------------------------VHSSLF------N--------TTPPIPNEVL 196 (224)
Q Consensus 166 ~~~~~~-------s~~pg~~~----------------------------~~~~lf------~--------~~p~~p~evl 196 (224)
++.+=. ..+|.... ++..+. + -...++.+-|
T Consensus 120 v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rla~~L~~l~~~~g~~~~~~~~i~~~lt~~~l 199 (243)
T 3la7_A 120 LLSAPIEQVEQALKENPELSMLMLRGLSSRILQTEMMIETLAHRDMGSRLVSFLLILCRDFGVPCADGITIDLKLSHQAI 199 (243)
T ss_dssp EEEEEHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHEEECSSSEEECSCCCHHHH
T ss_pred EEEEcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCeEEeccCCHHHH
Confidence 433211 23443310 001110 0 0113889999
Q ss_pred HhhcCCCHHHHHHHHhccCCCcceec
Q 040384 197 TKTFLVGDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 197 a~af~v~~~~v~~l~~~~~~~~~i~r 222 (224)
|...|++.+.+.++.+.+.+.++|.+
T Consensus 200 A~~lG~sr~tvsR~l~~L~~~GlI~~ 225 (243)
T 3la7_A 200 AEAIGSTRVTVTRLLGDLREKKMISI 225 (243)
T ss_dssp HHHHTCCHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHCCcHHHHHHHHHHHHHCCCEEE
Confidence 99999999999999999888888754
No 203
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=68.58 E-value=3.7 Score=35.68 Aligned_cols=44 Identities=16% Similarity=0.363 Sum_probs=31.4
Q ss_pred CCceEEEEeC----eEEEEEEeCC----------C----eEEEEEECCCCEEEecCCCeeEE
Q 040384 113 SSESSIVIRG----TVLVGIITTD----------N----VFYSKVVTAGMLFLIPRGLVHFQ 156 (224)
Q Consensus 113 a~Ei~yVl~G----~~~v~~v~~~----------~----~~~~~~l~~GDv~vvP~G~~H~~ 156 (224)
-+|+.|++.. ++.+|.-..+ + -+....+++||.+++|+|.+|..
T Consensus 117 KpE~~y~L~~~~~~~~~~G~~~~~~e~l~~~i~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~ 178 (319)
T 1qwr_A 117 KTECWYIIDCKENAEIIYGHTARSKTELVTMINSGDWEGLLRRIKIKPGDFYYVPSGTLHAL 178 (319)
T ss_dssp CCEEEEEEEECTTCEEEEEECCSSHHHHHHHHHTTCHHHHEEEEECCTTCEEEECTTCCEEE
T ss_pred CCEEEEEccCCCchhheeCCCCCCHHHHHHHHHcCCHHHhceEEEcCCCCEEEcCCCCceEe
Confidence 4899999984 4555521100 0 02468999999999999999997
No 204
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=68.54 E-value=3.9 Score=29.82 Aligned_cols=52 Identities=17% Similarity=0.121 Sum_probs=33.8
Q ss_pred EEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCe-EEEEEECCCCEE
Q 040384 94 TNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNV-FYSKVVTAGMLF 146 (224)
Q Consensus 94 ~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~-~~~~~l~~GDv~ 146 (224)
+....+++|..+-..-. .+..+.+|++|.+++...+++|+ .....+.+||++
T Consensus 35 ~~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 87 (154)
T 2z69_A 35 SDLVNLDKGAYVFRQGE-PAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTF 87 (154)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEESCEEEECCCC-----CCEEECTTEEE
T ss_pred CcEEEecCCCEEecCCC-ccceEEEEEeCEEEEEEECCCCCEEEEEEccCCCee
Confidence 44566777776533222 35679999999999887665554 234688999987
No 205
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=67.75 E-value=12 Score=26.94 Aligned_cols=50 Identities=18% Similarity=0.182 Sum_probs=31.1
Q ss_pred CCcccCceecCCCCceEEEEe-CeEEEEEEeCCCeEEEEEECCCCEEEecCCCe
Q 040384 101 VGGINPPHLHPRSSESSIVIR-GTVLVGIITTDNVFYSKVVTAGMLFLIPRGLV 153 (224)
Q Consensus 101 pgg~~~pH~Hp~a~Ei~yVl~-G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~ 153 (224)
.||+..|-....-.....|+. |.++. +.+|+.....++.||.+++++|+.
T Consensus 22 ~gGI~LP~sakeKp~~G~VvAVG~G~~---~~~G~~~p~~VkvGD~Vlf~k~y~ 72 (97)
T 1pcq_O 22 AGGIVLTGSAAAKSTRGEVLAVGNGRI---LENGEVKPLDVKVGDIVIFNDGYG 72 (97)
T ss_dssp TTSSCCCCCCSCCCCEEEEEEECSEEC---TTSSSCEECSCCTTCEEEECCCSS
T ss_pred cceEEeCcccccCCcccEEEEEcCcee---cCCCCEEecccCCCCEEEECCccC
Confidence 467777754433333333333 65542 345665667899999999999544
No 206
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=67.30 E-value=9.9 Score=29.70 Aligned_cols=124 Identities=10% Similarity=0.091 Sum_probs=45.4
Q ss_pred EEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCe-EEEEEECCCCEEEec----CC--CeeEEEecCCccEEEE
Q 040384 95 NRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNV-FYSKVVTAGMLFLIP----RG--LVHFQLNVGKENVLFF 167 (224)
Q Consensus 95 ~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~-~~~~~l~~GDv~vvP----~G--~~H~~~N~G~~~a~~~ 167 (224)
....+++|..+-.. ...+..+.+|++|.+++...+++|+ .....+.+||++-.- .+ ..+..... ++..++
T Consensus 23 ~~~~~~~g~~i~~~-G~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~~A~--~~~~v~ 99 (213)
T 1o5l_A 23 KVIVFRKGEIVKHQ-DDPIEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQIIASGFIFSSEPRFPVNVVAG--ENSKIL 99 (213)
T ss_dssp EEEEECTTCEEECT-TCBCCEEEEEEESCEEEEEECTTSCEEEEEEECSSEESSGGGTTSSSCBCSSEEEES--SSEEEE
T ss_pred EEEEECCCCEEEcC-CCccceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEeeeHHHhcCCCCceEEEEEc--cceEEE
Confidence 45667777765322 2235678999999999988877765 345678999987322 11 22333333 334433
Q ss_pred EEee--------CCCCccee----------------------------hhhhhhc-------CCCCCCHHHHHhhcCCCH
Q 040384 168 PSFN--------SQLPGTQF----------------------------VHSSLFN-------TTPPIPNEVLTKTFLVGD 204 (224)
Q Consensus 168 ~~~~--------s~~pg~~~----------------------------~~~~lf~-------~~p~~p~evla~af~v~~ 204 (224)
. ++ ..+|.... ++..+.. -...++.+-||.-.|++.
T Consensus 100 ~-i~~~~~~~l~~~~p~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~Rl~~~L~~~~~~~g~~~~~~t~~~lA~~lg~sr 178 (213)
T 1o5l_A 100 S-IPKEVFLDLLMKDRELLLFFLKDVSEHFRVVSEKLFFLTTKTLREKLMNFLVRHMNEKRELTLPVTLEELSRLFGCAR 178 (213)
T ss_dssp E-EEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------------------------------------
T ss_pred E-EeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHhccCCcccCCCCHHHHHHHhCCCH
Confidence 2 22 12333210 1111110 001378899999999999
Q ss_pred HHHHHHHhccCCCcceec
Q 040384 205 EVINAIKAAITSAQLGHR 222 (224)
Q Consensus 205 ~~v~~l~~~~~~~~~i~r 222 (224)
+.+.++.+.+.+.++|.+
T Consensus 179 ~tvsR~l~~L~~~G~I~~ 196 (213)
T 1o5l_A 179 PALSRVFQELEREGYIEK 196 (213)
T ss_dssp ------------------
T ss_pred HHHHHHHHHHHHCCeEEE
Confidence 999999999999988864
No 207
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=66.93 E-value=12 Score=28.71 Aligned_cols=107 Identities=12% Similarity=0.018 Sum_probs=65.6
Q ss_pred CCceEEEEeCeEEEEEEeCCCe-EEEEEECCCCEEEe--cCC--CeeEEEecCCccEEEEEEeeCCC--Cccee------
Q 040384 113 SSESSIVIRGTVLVGIITTDNV-FYSKVVTAGMLFLI--PRG--LVHFQLNVGKENVLFFPSFNSQL--PGTQF------ 179 (224)
Q Consensus 113 a~Ei~yVl~G~~~v~~v~~~~~-~~~~~l~~GDv~vv--P~G--~~H~~~N~G~~~a~~~~~~~s~~--pg~~~------ 179 (224)
+..+.+|++|.+++...+++|+ .....+.+||++=. -.+ ..+.... .++..++. ++... |....
T Consensus 17 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~Ge~~~~~~~~~~~~~A--~~~~~v~~-i~~~~~~p~~~~~~~~~l 93 (195)
T 3b02_A 17 ARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFGEEALEGKAYRYTAEA--MTEAVVQG-LEPRAMDHEALHRVARNL 93 (195)
T ss_dssp CCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEECGGGGTCSBCSSEEEE--SSSEEEEE-ECGGGCCHHHHHHHHHHH
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEechhhhCCCCceeEEEE--CCcEEEEE-EcHHHcCHHHHHHHHHHH
Confidence 5679999999999988877764 44578899999843 011 1122222 23344332 22211 22100
Q ss_pred ----------------------hhhhh------hcC-------CCCCCHHHHHhhcCCCHHHHHHHHhccCCCcceec
Q 040384 180 ----------------------VHSSL------FNT-------TPPIPNEVLTKTFLVGDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 180 ----------------------~~~~l------f~~-------~p~~p~evla~af~v~~~~v~~l~~~~~~~~~i~r 222 (224)
++..+ ++. ...++.+-||...|++.+++.++.+.+.+.++|.+
T Consensus 94 ~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~lA~~lg~sr~tvsR~l~~L~~~g~I~~ 171 (195)
T 3b02_A 94 ARQMRRVQAYEAHLQTGELRARIARYLLFLADTPLSARDRQGIYVTVSHEEIADATASIRESVSKVLADLRREGLIAT 171 (195)
T ss_dssp HHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTSTTEEEETTEEEEECCHHHHHHTTTSCHHHHHHHHHHHHHHTSEEE
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCCCeeeccCCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEe
Confidence 11111 110 01378999999999999999999998888887754
No 208
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=66.31 E-value=10 Score=29.24 Aligned_cols=49 Identities=12% Similarity=0.100 Sum_probs=34.8
Q ss_pred EEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEE
Q 040384 94 TNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLF 146 (224)
Q Consensus 94 ~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~ 146 (224)
+....+.||..+--. ...+..+.+|++|++.+.. ++|+ ....+.+||+|
T Consensus 94 ~~~~~~~~ge~I~~~-G~~~~~ly~I~~G~v~~~~--~~g~-~~~~l~~G~~f 142 (198)
T 2ptm_A 94 LEFEVFQPADYVIQE-GTFGDRMFFIQQGIVDIIM--SDGV-IATSLSDGSYF 142 (198)
T ss_dssp CEEEEECTTCEEECT-TSCCSEEEEEEECCEEEEC--TTSC-EEEEECTTCEE
T ss_pred ccceeeCCCCEEEEC-CCcCcEEEEEEeCEEEEEe--cCCe-EEEEecCCCEe
Confidence 456677787765322 2235689999999998764 5566 56789999987
No 209
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=65.94 E-value=13 Score=29.55 Aligned_cols=123 Identities=8% Similarity=0.042 Sum_probs=74.3
Q ss_pred EEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEE-EEEECCCCEEEecC---CC----eeEEEecCCccEEEE
Q 040384 96 RVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFY-SKVVTAGMLFLIPR---GL----VHFQLNVGKENVLFF 167 (224)
Q Consensus 96 rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~-~~~l~~GDv~vvP~---G~----~H~~~N~G~~~a~~~ 167 (224)
...+++|..+-. --..+..+.+|++|.+++...+++|+.. ...+ +||++-... +. .+...... ++..++
T Consensus 20 ~~~~~~ge~i~~-~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~-~G~~~Ge~~~~~~~~~~~~~~~~a~~-~~~~v~ 96 (238)
T 2bgc_A 20 PKQFHKKELIFN-QWDPQEYCIFLYDGITKLTSISENGTIMNLQYY-KGAFVIMSGFIDTETSVGYYNLEVIS-EQATAY 96 (238)
T ss_dssp CEEEETTCEEEC-TTCCCCEEEEEEESEEEEEEECTTSCEEEEEEE-ESSEEEESBCTTTCCBSCCCEEEECS-SEEEEE
T ss_pred EEEECCCCEEEe-CCCCCceEEEEEecEEEEEEECCCCCEEEEEEc-CCCEecchhhhcCCCcCcceeEEEEE-cceEEE
Confidence 456677776522 1223567889999999998888777543 3455 899985542 22 23333332 344444
Q ss_pred EEeeC--------CCCccee----------------------------hhhhh------hcC--------C-CCCCHHHH
Q 040384 168 PSFNS--------QLPGTQF----------------------------VHSSL------FNT--------T-PPIPNEVL 196 (224)
Q Consensus 168 ~~~~s--------~~pg~~~----------------------------~~~~l------f~~--------~-p~~p~evl 196 (224)
. ++. .+|.... ++..+ ++. . |.++.+-|
T Consensus 97 ~-i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rla~~L~~l~~~~g~~~~~~~~i~~~~~t~~~l 175 (238)
T 2bgc_A 97 V-IKINELKELLSKNLTHFFYVFQTLQKQVSYSLAKFNDFSINGKLGSICSQLLILTYVYGKETPDGIKITLDNLTMQEL 175 (238)
T ss_dssp E-EEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHEEEETTEEEECCSCCCHHHH
T ss_pred E-EeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhCCCCCCceEEEeccCCHHHH
Confidence 3 321 2333210 00111 110 1 13889999
Q ss_pred HhhcCCCH-HHHHHHHhccCCCcceec
Q 040384 197 TKTFLVGD-EVINAIKAAITSAQLGHR 222 (224)
Q Consensus 197 a~af~v~~-~~v~~l~~~~~~~~~i~r 222 (224)
|...|++. +.+.++.+.+.+.++|..
T Consensus 176 A~~lG~sr~etvsR~l~~l~~~glI~~ 202 (238)
T 2bgc_A 176 GYSSGIAHSSAVSRIISKLKQEKVIVY 202 (238)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHTTSEEE
T ss_pred HHHhCCChHHHHHHHHHHHHHCCCEEe
Confidence 99999999 899999998888888754
No 210
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=65.85 E-value=8.5 Score=30.56 Aligned_cols=126 Identities=8% Similarity=0.012 Sum_probs=77.0
Q ss_pred EEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCe-EEEEEECCCCEEEec----CC--CeeEEEecCCccEEE
Q 040384 94 TNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNV-FYSKVVTAGMLFLIP----RG--LVHFQLNVGKENVLF 166 (224)
Q Consensus 94 ~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~-~~~~~l~~GDv~vvP----~G--~~H~~~N~G~~~a~~ 166 (224)
+....+.+|..+-.- -..+..+.+|++|.+++...+++|+ .....+.+||++-.- .. ..+..... ++..+
T Consensus 43 ~~~~~~~~ge~i~~~-G~~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~fG~~~~~~~~~~~~~~~~A~--~~~~v 119 (232)
T 1zyb_A 43 LHFIKHKAGETIIKS-GNPCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIEPQSLFGMNTNYASSYVAH--TEVHT 119 (232)
T ss_dssp CEEEEECTTCEEECT-TSBCCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEECGGGGSSSCCBCSSEEEES--SCEEE
T ss_pred cEEEEECCCCEEECC-CCcccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCeeeehHHhCCCCCCceEEEEc--cceEE
Confidence 456777888765332 2235689999999999988776653 445678999988432 11 23333333 33443
Q ss_pred EEEee-------CCCCccee----------------------------hhhhhhc--CCC------CCCHHHHHhhcCCC
Q 040384 167 FPSFN-------SQLPGTQF----------------------------VHSSLFN--TTP------PIPNEVLTKTFLVG 203 (224)
Q Consensus 167 ~~~~~-------s~~pg~~~----------------------------~~~~lf~--~~p------~~p~evla~af~v~ 203 (224)
+.+-. ..+|.... ++..+.. ..+ .++.+-||...|++
T Consensus 120 ~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~t~~~lA~~lG~s 199 (232)
T 1zyb_A 120 VCISKAFVLSDLFRYDIFRLNYMNIVSNRAQNLYSRLWDEPTLDLKSKIIRFFLSHCEKPQGEKTFKVKMDDLARCLDDT 199 (232)
T ss_dssp EEEEHHHHHHTGGGSHHHHHHHHHHHHHHHHHHHHHTTSCCCCSHHHHHHHHHHTTCSSSSSCEEEECCHHHHHHHHTSC
T ss_pred EEEEHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHhhcCCeEEecCCHHHHHHHhCCC
Confidence 32211 12333210 1111111 011 27899999999999
Q ss_pred HHHHHHHHhccCCCcceec
Q 040384 204 DEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 204 ~~~v~~l~~~~~~~~~i~r 222 (224)
.+.+.++.+.+.+.++|.+
T Consensus 200 r~tvsR~l~~l~~~glI~~ 218 (232)
T 1zyb_A 200 RLNISKTLNELQDNGLIEL 218 (232)
T ss_dssp HHHHHHHHHHHHHTTSCEE
T ss_pred hhHHHHHHHHHHHCCCEEe
Confidence 9999999998888888754
No 211
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=65.78 E-value=14 Score=29.98 Aligned_cols=127 Identities=9% Similarity=0.037 Sum_probs=77.6
Q ss_pred EEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCe-EEEEEECCCCEEEecC----C--CeeEEEecCCccEEE
Q 040384 94 TNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNV-FYSKVVTAGMLFLIPR----G--LVHFQLNVGKENVLF 166 (224)
Q Consensus 94 ~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~-~~~~~l~~GDv~vvP~----G--~~H~~~N~G~~~a~~ 166 (224)
+....+++|..+-.- -.....+.+|++|.+++...+++|+ .....+.+||++-... + ........ ++..+
T Consensus 69 ~~~~~~~~ge~i~~~-G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~Ge~~~~~~~~~~~~~~~A~--~~~~l 145 (260)
T 3kcc_A 69 CHIHKYPSKSTLIHQ-GEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAK--TACEV 145 (260)
T ss_dssp SEEEEECTTCEEECT-TCBCCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCCSEEEES--SCEEE
T ss_pred CEEEEECCCCEEECC-CCcCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehHHhCCCCCCceEEEEC--CCeEE
Confidence 346677888765322 2235689999999999998877765 3457889999984322 1 12223333 33443
Q ss_pred EEEee-------CCCCccee----------------------------hhhhhh--cCC-----------CCCCHHHHHh
Q 040384 167 FPSFN-------SQLPGTQF----------------------------VHSSLF--NTT-----------PPIPNEVLTK 198 (224)
Q Consensus 167 ~~~~~-------s~~pg~~~----------------------------~~~~lf--~~~-----------p~~p~evla~ 198 (224)
+.+=. ..+|.... ++..+. ... -.++.+-||.
T Consensus 146 ~~i~~~~~~~l~~~~p~l~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rla~~Ll~l~~~~~~~~~~~~~~l~lt~~~lA~ 225 (260)
T 3kcc_A 146 AEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLLVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQ 225 (260)
T ss_dssp EEEEHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHTSTTCEEETTEEEEECCHHHHHH
T ss_pred EEEcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCCceeecCCHHHHHH
Confidence 33211 12343311 001110 000 0278899999
Q ss_pred hcCCCHHHHHHHHhccCCCcceecC
Q 040384 199 TFLVGDEVINAIKAAITSAQLGHRP 223 (224)
Q Consensus 199 af~v~~~~v~~l~~~~~~~~~i~r~ 223 (224)
..|++.+.+.++.+.+.+.++|.+.
T Consensus 226 ~lG~sr~tvsR~l~~L~~~GlI~~~ 250 (260)
T 3kcc_A 226 IVGCSRETVGRILKMLEDQNLISAH 250 (260)
T ss_dssp HHTCCHHHHHHHHHHHHHTTSEEEC
T ss_pred HhCCCHHHHHHHHHHHHHCCCEEEc
Confidence 9999999999999999998888653
No 212
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=65.60 E-value=18 Score=27.45 Aligned_cols=52 Identities=6% Similarity=-0.016 Sum_probs=37.1
Q ss_pred EEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCe-EEEEEECCCCEEE
Q 040384 95 NRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNV-FYSKVVTAGMLFL 147 (224)
Q Consensus 95 ~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~-~~~~~l~~GDv~v 147 (224)
....+++|...-. -...+..+.+|++|.+++...+++|+ .....+.+||++-
T Consensus 31 ~~~~~~~g~~l~~-~G~~~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~g 83 (194)
T 3dn7_A 31 QLKKVRKKETLLK-TGEICRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLS 83 (194)
T ss_dssp EEEEECTTCEEEC-TTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEC
T ss_pred EEEEEcCCCEEEC-CCCeeeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEe
Confidence 3566777775422 22235689999999999998887775 3456789999985
No 213
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=65.24 E-value=8.3 Score=30.37 Aligned_cols=126 Identities=10% Similarity=-0.019 Sum_probs=73.0
Q ss_pred EEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCe-EEEEEECCCCEEEec----C-CCeeEEEecCCccEEEE
Q 040384 94 TNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNV-FYSKVVTAGMLFLIP----R-GLVHFQLNVGKENVLFF 167 (224)
Q Consensus 94 ~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~-~~~~~l~~GDv~vvP----~-G~~H~~~N~G~~~a~~~ 167 (224)
+....+++|..+-.. ...+..+.+|++|.+++...+++|+ .....+.+||++-.. . ...+..... ++..++
T Consensus 33 ~~~~~~~~g~~i~~~-g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~--~~~~v~ 109 (232)
T 2gau_A 33 IQPFPCKKASTVFSE-GDIPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFFGMRPYFAEETCSSTAIAV--ENSKVL 109 (232)
T ss_dssp CEEEEECTTCEEECT-TCCCCEEEEEEESCEEEEC-----CCCEEEEECTTCEESHHHHHHTSCCSSEEEES--SCEEEE
T ss_pred CeEEEECCCCEEEeC-CCCCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEeeeehhhCCCCcceEEEEe--cceEEE
Confidence 445677777765322 2235678999999999987766553 346788999988322 1 122233333 334433
Q ss_pred EEee-------CCCCccee----------------------------hhhhh------hc-------CCCCCCHHHHHhh
Q 040384 168 PSFN-------SQLPGTQF----------------------------VHSSL------FN-------TTPPIPNEVLTKT 199 (224)
Q Consensus 168 ~~~~-------s~~pg~~~----------------------------~~~~l------f~-------~~p~~p~evla~a 199 (224)
.+=. ..+|.... ++..+ ++ -...++.+-||.-
T Consensus 110 ~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~lA~~ 189 (232)
T 2gau_A 110 AIPVEAIEALLKGNTSFCRYFLKALAKELGYAERRTVTLTQKHVRGRLAETLLILKENFGFENDGATLSIYLSREELATL 189 (232)
T ss_dssp EEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHCBCTTSSBBSCCCCHHHHHHH
T ss_pred EEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCCcEEEcccCHHHHHHH
Confidence 2210 12332210 11111 11 0114899999999
Q ss_pred cCCCHHHHHHHHhccCCCcceec
Q 040384 200 FLVGDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 200 f~v~~~~v~~l~~~~~~~~~i~r 222 (224)
.|++.+.+.++.+.+.+.++|.+
T Consensus 190 lg~sr~tvsR~l~~l~~~g~I~~ 212 (232)
T 2gau_A 190 SNMTVSNAIRTLSTFVSERMLAL 212 (232)
T ss_dssp TTSCHHHHHHHHHHHHHTTSEEE
T ss_pred hCCCHHHHHHHHHHHHHCCCEee
Confidence 99999999999999988888764
No 214
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=62.07 E-value=24 Score=25.91 Aligned_cols=51 Identities=14% Similarity=-0.021 Sum_probs=35.3
Q ss_pred EEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCe-EEEEEECCCCEE
Q 040384 94 TNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNV-FYSKVVTAGMLF 146 (224)
Q Consensus 94 ~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~-~~~~~l~~GDv~ 146 (224)
+....+.+|..+- +-...+..+.+|++|++++.. +.+|+ .....+.+||++
T Consensus 61 ~~~~~~~~g~~i~-~~G~~~~~~y~i~~G~v~~~~-~~~g~~~~~~~~~~G~~f 112 (161)
T 3idb_B 61 MFEKLVKEGEHVI-DQGDDGDNFYVIDRGTFDIYV-KCDGVGRCVGNYDNRGSF 112 (161)
T ss_dssp CEEEEECTTCEEE-CTTSCCCEEEEEEESEEEEEE-EETTEEEEEEEEESCCEE
T ss_pred cceeEeCCCCEEE-eCCCCCcEEEEEEeCEEEEEE-cCCCCeEEEEEcCCCCEe
Confidence 3456777777653 223346789999999999987 55664 345678899976
No 215
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=61.64 E-value=14 Score=30.91 Aligned_cols=51 Identities=16% Similarity=0.154 Sum_probs=37.3
Q ss_pred EEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEE
Q 040384 95 NRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLF 146 (224)
Q Consensus 95 ~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~ 146 (224)
....+++|..+-- --..+..+.+|++|++++...+.+|+.....+.+||+|
T Consensus 37 ~~~~~~~g~~i~~-~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~f 87 (333)
T 4ava_A 37 QPLRAAAGQVLLR-QGEPAVSFLLISSGSAEVSHVGDDGVAIIARALPGMIV 87 (333)
T ss_dssp EEEEECTTCEEEC-TTSBCCCEEEEEECCEEEEEECTTCCEEEEEECTTCEE
T ss_pred eEEEECCCCEEEe-CCCcCCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEe
Confidence 3556677665422 22235679999999999988887776667889999987
No 216
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=60.91 E-value=20 Score=29.10 Aligned_cols=52 Identities=15% Similarity=0.099 Sum_probs=37.2
Q ss_pred EEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCC--eEEEEEECCCCEE
Q 040384 94 TNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDN--VFYSKVVTAGMLF 146 (224)
Q Consensus 94 ~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~--~~~~~~l~~GDv~ 146 (224)
+....+.+|..+-.. ...+..+.+|++|++.+.....++ ......+.+||+|
T Consensus 180 ~~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~f 233 (291)
T 2qcs_B 180 LEPVQFEDGQKIVVQ-GEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYF 233 (291)
T ss_dssp CEEEEECTTCEEECT-TSCCCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEE
T ss_pred cEEEEECCCCEEEeC-CccCCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEe
Confidence 456677777765432 224578999999999988765554 3456789999988
No 217
>2k02_A Ferrous iron transport protein C; FEOC, iron-sulfur, metal-binding, metal binding protein; NMR {Klebsiella pneumoniae subsp}
Probab=60.75 E-value=4.3 Score=28.70 Aligned_cols=34 Identities=12% Similarity=0.113 Sum_probs=30.2
Q ss_pred CCCHHHHHhhcCCCHHHHHHHHhccCCCcceecC
Q 040384 190 PIPNEVLTKTFLVGDEVINAIKAAITSAQLGHRP 223 (224)
Q Consensus 190 ~~p~evla~af~v~~~~v~~l~~~~~~~~~i~r~ 223 (224)
.+..+-|++.|++++.+|++......+.+.|.|-
T Consensus 16 ~vsv~eLA~~l~VS~~TIRrDL~~Le~~G~l~R~ 49 (87)
T 2k02_A 16 RMEAKQLSARLQTPQPLIDAMLERMEAMGKVVRI 49 (87)
T ss_dssp SEEHHHHHHHTTCCHHHHHHHHHHHHTTCCSEEE
T ss_pred CCcHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEE
Confidence 3778889999999999999999999998888873
No 218
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=60.57 E-value=7.1 Score=34.99 Aligned_cols=23 Identities=13% Similarity=0.093 Sum_probs=20.3
Q ss_pred EEEEEECCCCEEEecCCCeeEEE
Q 040384 135 FYSKVVTAGMLFLIPRGLVHFQL 157 (224)
Q Consensus 135 ~~~~~l~~GDv~vvP~G~~H~~~ 157 (224)
+....|++||.+++|+|.+|...
T Consensus 239 Ln~v~l~pGd~~fipAG~~HAy~ 261 (394)
T 2wfp_A 239 LNVVKLNPGEAMFLFAETPHAYL 261 (394)
T ss_dssp EEEEEECTTCEEEECTTCCEEEE
T ss_pred heEEECCCCCEEEcCCCCceEcC
Confidence 44678999999999999999974
No 219
>1xsq_A Ureidoglycolate hydrolase; northeast structural genomics consortium, NESG, structural genomics, protein structure initiative, PSI, ET81, X-RAY; 1.60A {Escherichia coli} SCOP: b.82.1.14 PDB: 1xsr_A 1yqc_A
Probab=59.85 E-value=30 Score=27.25 Aligned_cols=77 Identities=21% Similarity=0.207 Sum_probs=52.0
Q ss_pred cEEEEEEEEe--CCcccCceecCCCCceEEEEeCeEEEEEEeCCC------eEEEEEECCCCEEEecCCCeeEEEecCCc
Q 040384 91 GISTNRVDLA--VGGINPPHLHPRSSESSIVIRGTVLVGIITTDN------VFYSKVVTAGMLFLIPRGLVHFQLNVGKE 162 (224)
Q Consensus 91 gis~~rv~l~--pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~------~~~~~~l~~GDv~vvP~G~~H~~~N~G~~ 162 (224)
++++.|..-. |=-+...=.||..++.+.-+.|...+-+|.+++ ++..+....|+-+.+-+|.+|.-.-.-++
T Consensus 53 ~i~ifr~~~r~~p~~v~~lERHp~~sQafiPl~~~~~lVvVA~~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~ 132 (168)
T 1xsq_A 53 LISINRAQPANLPLTIHELERHPLGTQAFIPMKGEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQR 132 (168)
T ss_dssp EEEEEEECBCCSSCEEEEEEECTTBCEEEEESBCCCCEEEEEECSSSCEEEEEEEEECCSSCEEEECTTCEECCCCBSSS
T ss_pred EEEEEEecCCCCCceeeEEeeCCCCceEEEECCCCEEEEEEeCCCCCCChhheEEEEecCCeEEEeCCCceecccccCCC
Confidence 4555554322 223444678999999999999986644444432 56678999999999999999995433334
Q ss_pred cEEEE
Q 040384 163 NVLFF 167 (224)
Q Consensus 163 ~a~~~ 167 (224)
+..++
T Consensus 133 ~~~F~ 137 (168)
T 1xsq_A 133 VTDFL 137 (168)
T ss_dssp CEEEE
T ss_pred cceEE
Confidence 45555
No 220
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=59.61 E-value=14 Score=32.36 Aligned_cols=32 Identities=31% Similarity=0.381 Sum_probs=26.3
Q ss_pred EEEEECCCCEEEecCCCeeEEEecCCccEEEE
Q 040384 136 YSKVVTAGMLFLIPRGLVHFQLNVGKENVLFF 167 (224)
Q Consensus 136 ~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~ 167 (224)
+...=++||.+++++|..||.+|.|-.-.+.+
T Consensus 279 yr~~QkpGd~Vi~~PgayH~v~n~G~~~n~aw 310 (332)
T 2xxz_A 279 YRFVQRPGDLVWINAGTVHWVQATGWCNNIAW 310 (332)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSSEEEEEE
T ss_pred EEEEECCCCEEEECCCceEEEEecceeeEEEE
Confidence 45677999999999999999999996544444
No 221
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=56.56 E-value=14 Score=28.67 Aligned_cols=48 Identities=17% Similarity=0.070 Sum_probs=32.5
Q ss_pred EEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEE
Q 040384 94 TNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLF 146 (224)
Q Consensus 94 ~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~ 146 (224)
+....+.||..+-..-. .+.++.+|++|++.+. .++|+ ...+.+||+|
T Consensus 95 ~~~~~~~~ge~I~~~g~-~~~~ly~I~~G~v~v~--~~~g~--~~~l~~G~~f 142 (202)
T 3bpz_A 95 LKFEVFQPGDYIIREGT-IGKKMYFIQHGVVSVL--TKGNK--EMKLSDGSYF 142 (202)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEECEEEEE--CTTSC--CEEEETTCEE
T ss_pred CCceEECCCCEEEECCC-cCCeEEEEeccEEEEE--ECCCe--EEEEcCCCEe
Confidence 34567778776533222 3568999999998874 35555 2478999987
No 222
>2bdr_A Ureidoglycolate hydrolase; all beta protein, structural genomics, PSI, protein structur initiative, northeast structural genomics consortium; 1.60A {Pseudomonas putida} SCOP: b.82.1.14
Probab=55.49 E-value=37 Score=26.85 Aligned_cols=77 Identities=17% Similarity=0.096 Sum_probs=52.3
Q ss_pred cEEEEEEEEe--CCcccCceecCCCCceEEEEeCeEEEEEEeCCC------eEEEEEECCCCEEEecCCCeeEEEecCCc
Q 040384 91 GISTNRVDLA--VGGINPPHLHPRSSESSIVIRGTVLVGIITTDN------VFYSKVVTAGMLFLIPRGLVHFQLNVGKE 162 (224)
Q Consensus 91 gis~~rv~l~--pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~------~~~~~~l~~GDv~vvP~G~~H~~~N~G~~ 162 (224)
++++.|..-. |=-+...=.||..++.+.-+.|.-.+-+|.+++ ++..+....|+-+.+-+|.+|.-.-.-++
T Consensus 55 ~isifr~~~r~~p~~v~~lERHp~~sQafiPl~~~~~lVvVAp~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~ 134 (175)
T 2bdr_A 55 IISIFRADAQDMPLTVRMLERHPLGSQAFIPLLGNPFLIVVAPVGDAPVSGLVRAFRSNGRQGVNYHRGVWHHPVLTIEK 134 (175)
T ss_dssp EEEEEEEECCCSSEEECEEEECTTBCEEEEESSCCCEEEEEECSSSSCCGGGCEEEEECSSCEEEECTTCEECSCEESSS
T ss_pred EEEEEEccccCCCceeeEEeeCCCCceEEEECCCCEEEEEEeCCCCCCCccceEEEEeCCCeEEEeCCCceecccccCCC
Confidence 3555555333 223445678999999999999986555555543 46689999999999999999975333333
Q ss_pred cEEEE
Q 040384 163 NVLFF 167 (224)
Q Consensus 163 ~a~~~ 167 (224)
+..++
T Consensus 135 ~~dF~ 139 (175)
T 2bdr_A 135 RDDFL 139 (175)
T ss_dssp EEEEE
T ss_pred CceEE
Confidence 44444
No 223
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=54.48 E-value=28 Score=24.79 Aligned_cols=47 Identities=17% Similarity=0.070 Sum_probs=32.3
Q ss_pred EEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEE
Q 040384 95 NRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLF 146 (224)
Q Consensus 95 ~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~ 146 (224)
....+.+|..+-- -...+..+.+|++|++++.- +++ ....+.+||++
T Consensus 47 ~~~~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~~---~g~-~~~~~~~G~~f 93 (139)
T 3ocp_A 47 YPVEYGKDSCIIK-EGDVGSLVYVMEDGKVEVTK---EGV-KLCTMGPGKVF 93 (139)
T ss_dssp EEEEECSSCEEEC-TTSCCCEEEEEEECCEEEEE---TTE-EEEEECTTCEE
T ss_pred EEEecCCCCEEEe-CCCcCCEEEEEEeCEEEEEE---CCE-EEEEeCCCCEe
Confidence 4566777775532 22246789999999998842 455 45788999987
No 224
>1xn7_A Hypothetical protein YHGG; alpha+beta, GFT structural genomics, protein structure initiative, PSI, NESG; NMR {Escherichia coli} SCOP: a.4.5.62
Probab=52.73 E-value=6 Score=27.18 Aligned_cols=33 Identities=18% Similarity=0.219 Sum_probs=29.2
Q ss_pred CCCHHHHHhhcCCCHHHHHHHHhccCCCcceec
Q 040384 190 PIPNEVLTKTFLVGDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 190 ~~p~evla~af~v~~~~v~~l~~~~~~~~~i~r 222 (224)
.+..+-|++.|++++++|++......+.+.|.|
T Consensus 16 ~vsv~eLa~~l~VS~~TIRrdL~~Le~~G~l~R 48 (78)
T 1xn7_A 16 RMEAAQISQTLNTPQPMINAMLQQLESMGKAVR 48 (78)
T ss_dssp SBCHHHHHHHTTCCHHHHHHHHHHHHHHTSEEE
T ss_pred CCcHHHHHHHHCcCHHHHHHHHHHHHHCCCEEE
Confidence 378889999999999999999988888888776
No 225
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=51.67 E-value=18 Score=25.71 Aligned_cols=47 Identities=17% Similarity=0.135 Sum_probs=31.4
Q ss_pred EEEEEe-CCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEE
Q 040384 95 NRVDLA-VGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLF 146 (224)
Q Consensus 95 ~rv~l~-pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~ 146 (224)
....+. +|..+- +-...+..+.+|++|++++. ..+|+. ..+.+||++
T Consensus 40 ~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~--~~~g~~--~~l~~G~~f 87 (134)
T 2d93_A 40 IFEVVEQAGAIIL-EDGQELDSWYVILNGTVEIS--HPDGKV--ENLFMGNSF 87 (134)
T ss_dssp EEEEECSSSCEEE-CTTCEECEEEECCBSCEEEE--CSSSCE--EEECTTCEE
T ss_pred eEEEecCCCCEEE-eCCCCCCeEEEEEeCEEEEE--cCCCcE--EEecCCCcc
Confidence 455666 666442 22223567899999999876 355664 668999977
No 226
>2dkz_A Hypothetical protein LOC64762; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.28 E-value=9.4 Score=26.85 Aligned_cols=33 Identities=18% Similarity=0.377 Sum_probs=27.8
Q ss_pred hhhhhhcCCCCCCHHHHHhhcCCCHHHHHHHHhccC
Q 040384 180 VHSSLFNTTPPIPNEVLTKTFLVGDEVINAIKAAIT 215 (224)
Q Consensus 180 ~~~~lf~~~p~~p~evla~af~v~~~~v~~l~~~~~ 215 (224)
+.+++|-. +++|+|..-|+++.-+++||.+-+.
T Consensus 45 IDG~lL~~---L~ee~L~edf~ls~Lq~kKi~~fI~ 77 (84)
T 2dkz_A 45 IDGNLLVQ---LTEEILSEDFKLSKLQVKKIMQFIN 77 (84)
T ss_dssp CCHHHHHH---CCHHHHHHTSCCCHHHHHHHHHHHH
T ss_pred cchHHHHh---CCHHHHHhhcCCCHHHHHHHHHHHh
Confidence 44667775 9999999999999999999987654
No 227
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=50.75 E-value=39 Score=24.51 Aligned_cols=48 Identities=17% Similarity=0.167 Sum_probs=33.3
Q ss_pred EEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEE
Q 040384 94 TNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLF 146 (224)
Q Consensus 94 ~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~ 146 (224)
+....+.+|..+-- -...+..+.+|++|.+++.. +++ ....+.+||++
T Consensus 61 ~~~~~~~~g~~i~~-~G~~~~~~y~i~~G~v~~~~---~~~-~~~~~~~G~~f 108 (154)
T 3pna_A 61 MFPVSFIAGETVIQ-QGDEGDNFYVIDQGEMDVYV---NNE-WATSVGEGGSF 108 (154)
T ss_dssp CEEEEECTTCEEEC-TTSCCCEEEEEEESCEEEEE---TTE-EEEEECTTCEE
T ss_pred ceEEEECCCCEEEe-CCCCCCeEEEEEecEEEEEE---CCE-EEEEecCCCEe
Confidence 34567777776532 22246789999999999875 455 34578999986
No 228
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=50.57 E-value=23 Score=33.12 Aligned_cols=33 Identities=27% Similarity=0.389 Sum_probs=26.9
Q ss_pred EEEEECCCCEEEecCCCeeEEEecCCccEEEEE
Q 040384 136 YSKVVTAGMLFLIPRGLVHFQLNVGKENVLFFP 168 (224)
Q Consensus 136 ~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~~ 168 (224)
+...=++||.+++++|..||.+|.|-.-.+.+-
T Consensus 338 yr~vQkpGd~Vi~~PgayH~v~n~G~~~n~awN 370 (531)
T 3avr_A 338 YRFIQRPGDLVWINAGTVHWVQAIGWCNNIAWN 370 (531)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSSEEEEEEE
T ss_pred EEEEECCCCEEEECCCceEEEEecceeeeeEEE
Confidence 456779999999999999999999965444443
No 229
>2heo_A Z-DNA binding protein 1; protein DLM1-Z-DNA complex, immune system-DNA complex; 1.70A {Mus musculus} PDB: 1j75_A
Probab=48.90 E-value=4.6 Score=26.60 Aligned_cols=34 Identities=18% Similarity=0.212 Sum_probs=29.5
Q ss_pred CCCHHHHHhhcCCCHHHHHHHHhccCCCcceecC
Q 040384 190 PIPNEVLTKTFLVGDEVINAIKAAITSAQLGHRP 223 (224)
Q Consensus 190 ~~p~evla~af~v~~~~v~~l~~~~~~~~~i~r~ 223 (224)
.++..-||+.++++..+|.++.+.....++|..+
T Consensus 25 ~~s~~eLA~~lglsr~tv~~~l~~L~~~G~I~~~ 58 (67)
T 2heo_A 25 PVAIFQLVKKCQVPKKTLNQVLYRLKKEDRVSSP 58 (67)
T ss_dssp CEEHHHHHHHHCSCHHHHHHHHHHHHHTTSEEEE
T ss_pred CcCHHHHHHHHCcCHHHHHHHHHHHHHCCcEecC
Confidence 4888899999999999999999888888887653
No 230
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=44.98 E-value=18 Score=32.92 Aligned_cols=22 Identities=9% Similarity=0.036 Sum_probs=19.5
Q ss_pred EEEEECCCCEEEecCCCeeEEE
Q 040384 136 YSKVVTAGMLFLIPRGLVHFQL 157 (224)
Q Consensus 136 ~~~~l~~GDv~vvP~G~~H~~~ 157 (224)
....|++||.+++|+|.+|...
T Consensus 266 N~v~L~pGea~flpAg~~HAYl 287 (440)
T 1pmi_A 266 NHVGLNKGEAMFLQAKDPHAYI 287 (440)
T ss_dssp EEEEECTTCEEEECTTCCEEEE
T ss_pred ceEecCCCCEEecCCCCccccC
Confidence 3567999999999999999974
No 231
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=44.25 E-value=81 Score=27.05 Aligned_cols=65 Identities=12% Similarity=0.175 Sum_probs=40.6
Q ss_pred EEEeCCcccCceecCCCCceEE-EEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEecC--CccEEE
Q 040384 97 VDLAVGGINPPHLHPRSSESSI-VIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLNVG--KENVLF 166 (224)
Q Consensus 97 v~l~pgg~~~pH~Hp~a~Ei~y-Vl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N~G--~~~a~~ 166 (224)
+.|+.+....-.+-....|+.+ .+.|++.|.+ +|+ ++.|..-|.+++|+|.-....... .+++.+
T Consensus 62 l~L~~~~~~~~~~fl~~rE~~iV~lgG~~~V~v---dg~--~f~lg~~dalYVp~G~~~v~~as~d~~~~a~f 129 (289)
T 1ywk_A 62 LEIILDKELGVDYFLERRELGVINIGGPGFIEI---DGA--KETMKKQDGYYIGKETKHVRFSSENPDNPAKF 129 (289)
T ss_dssp EECCCSGGGTSSSTTTTEEEEEEECSSCEEEEE---TTE--EEEECTTCEEEECTTCCCEEEEESCTTSCCCE
T ss_pred EEcCCCceecccccCCCcEEEEEEccCeEEEEE---CCE--EEecCCCCEEEeCCCCeEEEEEecCCCCCeEE
Confidence 4555554443333334456665 5678988876 565 458899999999999765544332 334544
No 232
>1tc3_C Protein (TC3 transposase); DNA binding, helix-turn-helix, TC1/mariner family, complex (transposase/DNA), DNA binding protein/DNA complex; HET: DNA; 2.45A {Caenorhabditis elegans} SCOP: a.4.1.2
Probab=43.20 E-value=30 Score=19.62 Aligned_cols=29 Identities=7% Similarity=0.001 Sum_probs=24.5
Q ss_pred CCCHHHHHhhcCCCHHHHHHHHhccCCCc
Q 040384 190 PIPNEVLTKTFLVGDEVINAIKAAITSAQ 218 (224)
Q Consensus 190 ~~p~evla~af~v~~~~v~~l~~~~~~~~ 218 (224)
+++..-+|+.++++..+|.+....+...+
T Consensus 21 g~s~~~IA~~lgis~~Tv~~~~~~~~~~g 49 (51)
T 1tc3_C 21 NVSLHEMSRKISRSRHCIRVYLKDPVSYG 49 (51)
T ss_dssp TCCHHHHHHHHTCCHHHHHHHHHCSTTTT
T ss_pred CCCHHHHHHHHCcCHHHHHHHHhhHHhcC
Confidence 38889999999999999999887766544
No 233
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=42.92 E-value=51 Score=28.97 Aligned_cols=52 Identities=12% Similarity=-0.093 Sum_probs=35.8
Q ss_pred EEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCC-eEEEEEECCCCEEE
Q 040384 94 TNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDN-VFYSKVVTAGMLFL 147 (224)
Q Consensus 94 ~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~-~~~~~~l~~GDv~v 147 (224)
+....+.+|..+--.=. .+..+.+|++|++.+.. +.+| ......+.+||+|=
T Consensus 168 ~~~~~~~~Ge~I~~qGd-~~d~~YiI~sG~v~v~~-~~~G~~~~v~~l~~G~~fG 220 (416)
T 3tnp_B 168 MFEKLVKEGEHVIDQGD-DGDNFYVIDRGTFDIYV-KCDGVGRCVGNYDNRGSFG 220 (416)
T ss_dssp CEEEEECTTCEEECTTS-CCCEEEEEEECEEEEEE-ECSSCEEEEEEEESCCEEC
T ss_pred cEEEEeCCCCEEEeCCC-CCceEEEEEeeEEEEEE-ecCCCEEEEEEecCCCEEe
Confidence 44567777776533222 35788999999999877 4444 34457889999774
No 234
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=42.61 E-value=37 Score=31.52 Aligned_cols=32 Identities=31% Similarity=0.381 Sum_probs=26.1
Q ss_pred EEEEECCCCEEEecCCCeeEEEecCCccEEEE
Q 040384 136 YSKVVTAGMLFLIPRGLVHFQLNVGKENVLFF 167 (224)
Q Consensus 136 ~~~~l~~GDv~vvP~G~~H~~~N~G~~~a~~~ 167 (224)
+...=++||++++++|..||.+|.|-...+.+
T Consensus 313 yr~iQkPGdfVit~PgtyH~Vqs~Gf~~niaW 344 (510)
T 4ask_A 313 YRFVQRPGDLVWINAGTVHWVQATGWCNNIAW 344 (510)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSSEEEEEE
T ss_pred EEEEECCCCEEEECCCceEEEEecCeeeeeEE
Confidence 45677999999999999999999996444444
No 235
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=41.65 E-value=19 Score=25.54 Aligned_cols=45 Identities=18% Similarity=0.208 Sum_probs=30.3
Q ss_pred EEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEE
Q 040384 95 NRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLF 146 (224)
Q Consensus 95 ~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~ 146 (224)
....+++|..+-..-. .+..+.+|++|.+++... + ...+.+||++
T Consensus 35 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~---~---~~~~~~G~~~ 79 (138)
T 1vp6_A 35 RARTVPAGAVICRIGE-PGDRMFFVVEGSVSVATP---N---PVELGPGAFF 79 (138)
T ss_dssp EEEEECTTCEEECTTS-CCCEEEEEEESCEEECSS---S---CEEECTTCEE
T ss_pred cEEEeCCCCEEEeCCC-CcceEEEEEeeEEEEEeC---C---cceECCCCEe
Confidence 4567777776533222 356799999999988642 2 2478888876
No 236
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=40.64 E-value=42 Score=24.15 Aligned_cols=49 Identities=18% Similarity=0.137 Sum_probs=32.3
Q ss_pred EEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEe
Q 040384 95 NRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLI 148 (224)
Q Consensus 95 ~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vv 148 (224)
....+.+|..+-. -...+..+.+|++|++++.. .+ .....+.+||++-.
T Consensus 51 ~~~~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~~---~~-~~~~~~~~G~~fG~ 99 (160)
T 4f8a_A 51 QTVHCAPGDLIYH-AGESVDSLCFVVSGSLEVIQ---DD-EVVAILGKGDVFGD 99 (160)
T ss_dssp EEEEECTTCEEEC-TTSBCCEEEEEEESEEEEEE---TT-EEEEEEETTCEEEC
T ss_pred eeeeeCCCCEEEe-CCCCccEEEEEEeeEEEEEE---CC-EEEEEecCCCEeCc
Confidence 3456666665422 12235789999999999864 22 24578899998854
No 237
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=38.81 E-value=55 Score=28.68 Aligned_cols=54 Identities=15% Similarity=-0.010 Sum_probs=38.7
Q ss_pred EEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCe---EEEEEECCCCEEEe
Q 040384 94 TNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNV---FYSKVVTAGMLFLI 148 (224)
Q Consensus 94 ~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~---~~~~~l~~GDv~vv 148 (224)
+....+.+|..+-- -...+..+.+|++|++.+...+++|+ .....+.+||+|=.
T Consensus 65 ~~~~~~~~g~~i~~-~Gd~~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fGe 121 (469)
T 1o7f_A 65 GYYENLEKGITLFR-QGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGE 121 (469)
T ss_dssp CEEEEECTTCEEEC-TTSBCCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEECG
T ss_pred ceEEEECCCCEEEe-CCCCCCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcch
Confidence 34557777775522 22235789999999999988776663 56789999998854
No 238
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=38.60 E-value=35 Score=27.85 Aligned_cols=51 Identities=16% Similarity=0.167 Sum_probs=34.7
Q ss_pred EEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEe-CCC-eEEEEEECCCCEE
Q 040384 95 NRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIIT-TDN-VFYSKVVTAGMLF 146 (224)
Q Consensus 95 ~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~-~~~-~~~~~~l~~GDv~ 146 (224)
....+.+|..+-- --..+..+.+|++|++++...+ .+| ......+.+||+|
T Consensus 181 ~~~~~~~g~~I~~-~G~~~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~f 233 (299)
T 3shr_A 181 EETHYENGEYIIR-QGARGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWF 233 (299)
T ss_dssp EEEEECTTCEEEC-TTCEECEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEE
T ss_pred cEEEECCCCEEEe-CCCCCCEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEe
Confidence 4556677765422 1223467889999999998765 344 3456789999988
No 239
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=37.97 E-value=8 Score=30.24 Aligned_cols=124 Identities=15% Similarity=0.140 Sum_probs=74.1
Q ss_pred EEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCe-EEEEEECCCCEEEecC---C---CeeEEEecCCccEEEE
Q 040384 95 NRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNV-FYSKVVTAGMLFLIPR---G---LVHFQLNVGKENVLFF 167 (224)
Q Consensus 95 ~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~-~~~~~l~~GDv~vvP~---G---~~H~~~N~G~~~a~~~ 167 (224)
....+++|..+-.. ...+..+.+|++|.+++...+++|+ .....+.+||++-... + ..+...... +..++
T Consensus 33 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~~--~~~v~ 109 (227)
T 3dkw_A 33 DLVNLDKGAYVFRQ-GEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEAMMFMDTPNYVATAQAVV--PSQLF 109 (227)
T ss_dssp EEEECCTTEEEECT-TSBCCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEESCTTTTTTCSBCSSCEEESS--CCEEE
T ss_pred EEEEECCCCEEEcC-CCccceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHhcCCCCCCceEEEEcC--cEEEE
Confidence 34566677655322 2235679999999999887666553 2346788999885322 1 122233322 33333
Q ss_pred EEee--------CCCCccee----------------------------hhhhhh---c--------CCCCCCHHHHHhhc
Q 040384 168 PSFN--------SQLPGTQF----------------------------VHSSLF---N--------TTPPIPNEVLTKTF 200 (224)
Q Consensus 168 ~~~~--------s~~pg~~~----------------------------~~~~lf---~--------~~p~~p~evla~af 200 (224)
. ++ ..+|.... ++..+. . -...++.+-||...
T Consensus 110 ~-i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~~~~~t~~~lA~~l 188 (227)
T 3dkw_A 110 R-FSNKAYLRQLQDNTPLALALLAKLSTRLHQRIDEIETLSLKNATHRVVRYLLTLAAHAPGENCRVEIPVAKQLVAGHL 188 (227)
T ss_dssp E-EESHHHHHHHSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSSSCCCCCCCSCTHHHHHHT
T ss_pred E-EeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcCCCCeEEEecCCHHHHHHHh
Confidence 2 22 23444311 011110 0 01137889999999
Q ss_pred CCCHHHHHHHHhccCCCcceec
Q 040384 201 LVGDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 201 ~v~~~~v~~l~~~~~~~~~i~r 222 (224)
|++.+++.++.+.+.+.|+|.+
T Consensus 189 g~sr~tvsR~l~~l~~~g~I~~ 210 (227)
T 3dkw_A 189 SIQPETFSRIMHRLGDEGIIHL 210 (227)
T ss_dssp TSCHHHHHHHHHHHHHHTSEEE
T ss_pred CCCHHHHHHHHHHHHHCCcEEe
Confidence 9999999999998888888754
No 240
>1we3_O CPN10(groes); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: b.35.1.1 PDB: 1wf4_o* 1wnr_A
Probab=36.12 E-value=52 Score=23.68 Aligned_cols=54 Identities=20% Similarity=0.114 Sum_probs=33.2
Q ss_pred CCcccCceecCCCCceEEEEe-CeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEE
Q 040384 101 VGGINPPHLHPRSSESSIVIR-GTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQL 157 (224)
Q Consensus 101 pgg~~~pH~Hp~a~Ei~yVl~-G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~ 157 (224)
.||+..|-....-.....|+. |.+.. +.+|+.....++.||.+++++..-.-+.
T Consensus 27 ~gGI~LP~sakeKp~~G~VvAVG~G~~---~~~G~~~p~~VkvGD~Vlf~ky~Gtevk 81 (100)
T 1we3_O 27 KGGIVLPDTAKEKPQKGKVIAVGTGRV---LENGQRVPLEVKEGDIVVFAKYGGTEIE 81 (100)
T ss_dssp TTCCCCCTTTSCCCSEEEESCCCCCEE---CTTSCEECCSCCTTCEEEECTTCSEEEE
T ss_pred cceEEeCcccccCCcCCEEEEECCCcC---CCCCCEEeeecCCCCEEEECCCCCeEEE
Confidence 477777755433344444443 55532 3456656667999999999996544443
No 241
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=34.99 E-value=57 Score=25.10 Aligned_cols=51 Identities=18% Similarity=0.019 Sum_probs=34.6
Q ss_pred EEEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEe
Q 040384 93 STNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLI 148 (224)
Q Consensus 93 s~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vv 148 (224)
.+....+.||..+--- ...+.++.+|++|++.+.. ++. ....+.+||+|=.
T Consensus 97 ~~~~~~~~~ge~I~~~-G~~~~~ly~I~~G~v~v~~---~~~-~~~~l~~G~~fGe 147 (212)
T 3ukn_A 97 IIKTSFCAPGEFLIRQ-GDALQAIYFVCSGSMEVLK---DNT-VLAILGKGDLIGS 147 (212)
T ss_dssp HCEEEEECTTCEEECT-TSBCCEEEEEEECCEEEES---SSC-EEEEECTTCEEEC
T ss_pred HhheEEeCCCCEEEEC-CCcccEEEEEEecEEEEEE---CCe-EEEEecCCCCcCc
Confidence 3445677788765322 2235789999999998763 343 4578999998853
No 242
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=34.97 E-value=14 Score=24.11 Aligned_cols=31 Identities=16% Similarity=0.173 Sum_probs=27.0
Q ss_pred CCHHHHHhhcCCCHHHHHHHHhccCCCccee
Q 040384 191 IPNEVLTKTFLVGDEVINAIKAAITSAQLGH 221 (224)
Q Consensus 191 ~p~evla~af~v~~~~v~~l~~~~~~~~~i~ 221 (224)
++-+-.++-|+++.++|-++.++..+.|+|.
T Consensus 26 ldI~~~a~kygV~kdeV~~~LrrLe~KGLI~ 56 (59)
T 2xvc_A 26 LDIEHFSKVYGVEKQEVVKLLEALKNKGLIA 56 (59)
T ss_dssp EEHHHHHHHHCCCHHHHHHHHHHHHHTTSEE
T ss_pred EeHHHHHHHhCCCHHHHHHHHHHHHHCCCee
Confidence 6677889999999999999998888888874
No 243
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=34.65 E-value=1.7e+02 Score=25.96 Aligned_cols=74 Identities=12% Similarity=-0.008 Sum_probs=52.9
Q ss_pred EEEECC---------CCEEEecCCCeeEEEecCCccEEEEEEeeCCCCcc---------------------------eeh
Q 040384 137 SKVVTA---------GMLFLIPRGLVHFQLNVGKENVLFFPSFNSQLPGT---------------------------QFV 180 (224)
Q Consensus 137 ~~~l~~---------GDv~vvP~G~~H~~~N~G~~~a~~~~~~~s~~pg~---------------------------~~~ 180 (224)
..+|++ ||..|-|...+|...=.++.|+.+++.-...|-.. ..+
T Consensus 156 wr~l~~~~~~~~w~~gdsyveps~cphty~l~~d~parivsyt~~s~l~~l~~e~n~w~~~a~e~~l~~l~~~~aagv~L 235 (443)
T 3g7d_A 156 WRVLHANHGGDRWITGDSYVEPSYCPHSYSLAGDAPARIVSYTAQSNISPLMTEANNWSTGAFEEALKALSGKVSAGSVL 235 (443)
T ss_dssp EEEECBCCSSCTTSCBCEEEECTTCCCEEEESSSSCEEEEEEECCCTTHHHHHHHTTSCHHHHHHHHHHHSSCCCHHHHH
T ss_pred heeeccCCCCCccccCCcccccccCCcccccccCCchheEeeccccchHHHHHhhcccccHHHHHHHHhhcccchHHHHH
Confidence 567787 99999999999999888999999886553332111 001
Q ss_pred hhhhhcCCCCCCHHHHHhhcCCCHHHHHHHHh
Q 040384 181 HSSLFNTTPPIPNEVLTKTFLVGDEVINAIKA 212 (224)
Q Consensus 181 ~~~lf~~~p~~p~evla~af~v~~~~v~~l~~ 212 (224)
...+-+. +++.+=||+..|++.+.+..+..
T Consensus 236 R~ar~Re--glTQ~~LAe~TGIPq~hISeMen 265 (443)
T 3g7d_A 236 DLFLARR--AHTRTSAAEAAGVPPADLEAALR 265 (443)
T ss_dssp HHHHHHT--TCCHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHhc--CCCHHHHHHHhCCCHHHHHHHhc
Confidence 1222223 48999999999999998877643
No 244
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=34.14 E-value=78 Score=25.46 Aligned_cols=49 Identities=16% Similarity=0.153 Sum_probs=34.2
Q ss_pred EEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEE
Q 040384 94 TNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFL 147 (224)
Q Consensus 94 ~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~v 147 (224)
+....+.+|..+--. ...+..+.+|++|++.+.. +|+ ....+.+||+|=
T Consensus 62 ~~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~---~g~-~~~~l~~G~~fG 110 (291)
T 2qcs_B 62 MFPVSFIAGETVIQQ-GDEGDNFYVIDQGEMDVYV---NNE-WATSVGEGGSFG 110 (291)
T ss_dssp CEEEEECTTCEEECT-TSBCCEEEEEEECCEEEEE---TTE-EEEEECTTCEEC
T ss_pred ccEEEECCCCEEEeC-CCCCceEEEEeeeEEEEEE---CCe-EEEEcCCCCccc
Confidence 345677777765322 2245789999999998875 454 467899999883
No 245
>2vn2_A DNAD, chromosome replication initiation protein; DNA replication, primosome; 2.3A {Geobacillus kaustophilus HTA426}
Probab=31.78 E-value=26 Score=25.81 Aligned_cols=35 Identities=6% Similarity=-0.113 Sum_probs=30.2
Q ss_pred CCCCCHHHHHhhcCCCHHHHHHHHhccCCCcceec
Q 040384 188 TPPIPNEVLTKTFLVGDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 188 ~p~~p~evla~af~v~~~~v~~l~~~~~~~~~i~r 222 (224)
++..+.+.||+.++++..+|.+.....-..|+|.|
T Consensus 49 ~~~ps~~~LA~~l~~s~~~V~~~l~~Le~kGlI~~ 83 (128)
T 2vn2_A 49 VLFPTPAELAERMTVSAAECMEMVRRLLQKGMIAI 83 (128)
T ss_dssp CSSCCHHHHHHTSSSCHHHHHHHHHHHHHTTSSEE
T ss_pred CCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEE
Confidence 44578999999999999999999888888888766
No 246
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=30.78 E-value=21 Score=27.29 Aligned_cols=10 Identities=10% Similarity=0.341 Sum_probs=7.4
Q ss_pred CCHHHHHhhc
Q 040384 191 IPNEVLTKTF 200 (224)
Q Consensus 191 ~p~evla~af 200 (224)
+.++.+.+.+
T Consensus 176 ~sr~tvsR~l 185 (207)
T 2oz6_A 176 CSREMVGRVL 185 (207)
T ss_dssp SCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 7888888644
No 247
>2dk5_A DNA-directed RNA polymerase III 39 kDa polypeptide; structural genomics, winged helix domain, NPPSFA; NMR {Homo sapiens} SCOP: a.4.5.85
Probab=30.38 E-value=20 Score=25.16 Aligned_cols=43 Identities=16% Similarity=-0.018 Sum_probs=35.0
Q ss_pred hhhhhhc-CCCCCCHHHHHhhcCCCHHHHHHHHhccCCCcceec
Q 040384 180 VHSSLFN-TTPPIPNEVLTKTFLVGDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 180 ~~~~lf~-~~p~~p~evla~af~v~~~~v~~l~~~~~~~~~i~r 222 (224)
+-..|+. +++++...-|++..+++..++.++....-..++|.|
T Consensus 25 Vl~~I~~~g~~gi~qkeLa~~~~l~~~tvt~iLk~LE~kglIkr 68 (91)
T 2dk5_A 25 VYQIIEDAGNKGIWSRDVRYKSNLPLTEINKILKNLESKKLIKA 68 (91)
T ss_dssp HHHHHHHHCTTCEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHcCCCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEE
Confidence 3344443 355799999999999999999999998888899985
No 248
>2v79_A DNA replication protein DNAD; primosome, DNA-binding protein; HET: DNA; 2.00A {Bacillus subtilis}
Probab=30.34 E-value=20 Score=26.94 Aligned_cols=35 Identities=6% Similarity=-0.148 Sum_probs=28.6
Q ss_pred CCCCCHHHHHhhcCCCHHHHHHHHhccCCCcceec
Q 040384 188 TPPIPNEVLTKTFLVGDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 188 ~p~~p~evla~af~v~~~~v~~l~~~~~~~~~i~r 222 (224)
++..+.+.||+.+++++.++.++....-+.++|.+
T Consensus 49 ~~~ps~~~LA~~~~~s~~~v~~~L~~L~~KGlI~i 83 (135)
T 2v79_A 49 SYFPTPNQLQEGMSISVEECTNRLRMFIQKGFLFI 83 (135)
T ss_dssp CCSCCHHHHHTTSSSCHHHHHHHHHHHHHHTSCEE
T ss_pred CCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEE
Confidence 45678999999999999999999877766666654
No 249
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=29.19 E-value=46 Score=30.58 Aligned_cols=63 Identities=25% Similarity=0.096 Sum_probs=43.1
Q ss_pred ccCCCCccccEEEE----EEEEeCCcccCceecCC-CCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeE
Q 040384 82 HEFPGVNTQGISTN----RVDLAVGGINPPHLHPR-SSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHF 155 (224)
Q Consensus 82 ~~~P~l~~~gis~~----rv~l~pgg~~~pH~Hp~-a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~ 155 (224)
...|+.- -+.+. |....++.+.+|-+|.| .+|+++.+.|.-.. | ..-+.+|.+-.-|.+..|-
T Consensus 331 s~~pg~a--v~dFViFpPRw~v~e~TfrpPyyHrNv~SEfmgli~G~y~a-------k--~~Gf~pGg~SLH~~~~pHG 398 (471)
T 1eyb_A 331 SVRPGVA--IADFVIFPPRWGVADKTFRPPYYHRNCMSEFMGLIRGHYEA-------K--QGGFLPGGGSLHSTMTPHG 398 (471)
T ss_dssp CSSTTCE--EEEEEEECSEEECCSSSCCSCCCBCCSCEEEEEECCC-----------------CCTTCEEEECTTCCBC
T ss_pred CCCCCce--EEeEeecCCccCCCCCccCCCCCccchhhhhhhhccccccc-------c--ccCcCCCceeccCCCcCCC
Confidence 3445544 34444 67888999999999966 45899999998432 1 1358999999999999986
No 250
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=29.06 E-value=26 Score=27.34 Aligned_cols=10 Identities=10% Similarity=0.129 Sum_probs=6.7
Q ss_pred CCHHHHHhhc
Q 040384 191 IPNEVLTKTF 200 (224)
Q Consensus 191 ~p~evla~af 200 (224)
+.++.+.+.+
T Consensus 192 ~sr~tvsR~l 201 (232)
T 2gau_A 192 MTVSNAIRTL 201 (232)
T ss_dssp SCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 7777777543
No 251
>2jt1_A PEFI protein; solution structure, winged helix-turn-helix, transcripti regulatory protein, structural genomics, PSI-2; NMR {Salmonella typhimurium LT2}
Probab=29.03 E-value=20 Score=24.38 Aligned_cols=32 Identities=0% Similarity=-0.057 Sum_probs=26.7
Q ss_pred CCHHHHHhhcCCCHHHHHHHHhccCCCcceec
Q 040384 191 IPNEVLTKTFLVGDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 191 ~p~evla~af~v~~~~v~~l~~~~~~~~~i~r 222 (224)
...+=|+++|+++..+|++-.....+.|.|.|
T Consensus 25 psv~EIa~~lgvS~~TVrr~L~~Le~kG~I~R 56 (77)
T 2jt1_A 25 VKTRDIADAAGLSIYQVRLYLEQLHDVGVLEK 56 (77)
T ss_dssp EEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEE
T ss_pred cCHHHHHHHHCCCHHHHHHHHHHHHHCCcEEe
Confidence 45677999999999999998888777777765
No 252
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=28.89 E-value=21 Score=28.31 Aligned_cols=10 Identities=10% Similarity=0.408 Sum_probs=6.3
Q ss_pred CCH-HHHHhhc
Q 040384 191 IPN-EVLTKTF 200 (224)
Q Consensus 191 ~p~-evla~af 200 (224)
+++ +.+.+.+
T Consensus 181 ~sr~etvsR~l 191 (238)
T 2bgc_A 181 IAHSSAVSRII 191 (238)
T ss_dssp CCCHHHHHHHH
T ss_pred CChHHHHHHHH
Confidence 667 6777543
No 253
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=28.76 E-value=9.6 Score=27.17 Aligned_cols=34 Identities=18% Similarity=0.238 Sum_probs=22.8
Q ss_pred CCCceEEEEeCeEEEEEEeCCCeE-E--EEEECCCCEE
Q 040384 112 RSSESSIVIRGTVLVGIITTDNVF-Y--SKVVTAGMLF 146 (224)
Q Consensus 112 ~a~Ei~yVl~G~~~v~~v~~~~~~-~--~~~l~~GDv~ 146 (224)
.+..+.+|++|++++. .+++|+. . ...+.+||++
T Consensus 46 ~~~~~y~i~~G~v~~~-~~~~g~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 46 PVNEMLFIIRGRLESV-TTDGGRSGFYNRSLLKEGDFC 82 (137)
T ss_dssp BCSEEEEEEECCCEEE-CCSSCSSSSSCEEECCTTCBS
T ss_pred CCCeEEEEEeeEEEEE-EcCCCcceeeeeeeecCCCEe
Confidence 3567899999999954 4445542 1 2278888876
No 254
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=28.57 E-value=48 Score=25.76 Aligned_cols=49 Identities=10% Similarity=-0.045 Sum_probs=31.9
Q ss_pred EEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEE
Q 040384 94 TNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLF 146 (224)
Q Consensus 94 ~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~ 146 (224)
+....+.+|..+--. -..+..+.+|.+|++++...+ .. ....+.+||+|
T Consensus 148 ~~~~~~~~g~~i~~~-g~~~~~~y~I~~G~v~v~~~~--~~-~~~~l~~g~~f 196 (246)
T 3of1_A 148 LDTKIYQPGETIIRE-GDQGENFYLIEYGAVDVSKKG--QG-VINKLKDHDYF 196 (246)
T ss_dssp CEEEEECTTCEEECT-TSBCCEEEEEEECEEEEEETT--TE-EEEEEETTCEE
T ss_pred hheEEeCCCCEEEeC-CCcCCEEEEEEecEEEEEEcC--Cc-eEEEcCCCCcc
Confidence 345566777655322 223578889999999886532 22 45788899877
No 255
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=28.37 E-value=1.3e+02 Score=24.22 Aligned_cols=34 Identities=6% Similarity=-0.102 Sum_probs=26.2
Q ss_pred CceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCC
Q 040384 114 SESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRG 151 (224)
Q Consensus 114 ~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G 151 (224)
.-++|+++|++.+.. ++. ....|.+||.+++-..
T Consensus 141 ~~~v~~l~G~~~v~~---~~~-~~~~L~~~d~l~~~~~ 174 (200)
T 1yll_A 141 TLLLFAQQDGVAISL---QGQ-PRGQLAAHDCLCAEGL 174 (200)
T ss_dssp EEEEEESSSCEEEEE---TTE-EEEEECTTCEEEEESC
T ss_pred EEEEEEccCcEEEEc---CCC-ceeecCCCCEEEEeCC
Confidence 578999999998864 222 3689999999998554
No 256
>3nx6_A 10KDA chaperonin; bacterial blight, XOO4289, groes, xanthomonas oryzae PV. ORY KACC10331, chaperone; 1.97A {Xanthomonas oryzae PV} SCOP: b.35.1.0
Probab=28.11 E-value=70 Score=22.75 Aligned_cols=27 Identities=11% Similarity=-0.032 Sum_probs=19.6
Q ss_pred CCCeEEEEEECCCCEEEecCCCeeEEE
Q 040384 131 TDNVFYSKVVTAGMLFLIPRGLVHFQL 157 (224)
Q Consensus 131 ~~~~~~~~~l~~GDv~vvP~G~~H~~~ 157 (224)
.+|+.....++.||.+++++..-.-+.
T Consensus 50 ~~G~~~p~~VkvGD~Vl~~ky~Gtevk 76 (95)
T 3nx6_A 50 DNGSLHAPVVKVGDKVIYGQYAGSSYK 76 (95)
T ss_dssp TTSCEECCSCCTTCEEEECTTCSEEEE
T ss_pred CCCCEEccccCCCCEEEECCcCCeEEE
Confidence 346656668999999999986554443
No 257
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=28.03 E-value=31 Score=26.83 Aligned_cols=9 Identities=11% Similarity=0.316 Sum_probs=5.3
Q ss_pred CCHHHHHhh
Q 040384 191 IPNEVLTKT 199 (224)
Q Consensus 191 ~p~evla~a 199 (224)
+.++.+.+.
T Consensus 187 ~sr~tvsR~ 195 (231)
T 3e97_A 187 SSRETVSRV 195 (231)
T ss_dssp CCHHHHHHH
T ss_pred CcHHHHHHH
Confidence 566666653
No 258
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=27.83 E-value=58 Score=27.85 Aligned_cols=65 Identities=12% Similarity=0.088 Sum_probs=42.8
Q ss_pred cEEEEEEEEeCCcccC-ceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeE-------EEecCCc
Q 040384 91 GISTNRVDLAVGGINP-PHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHF-------QLNVGKE 162 (224)
Q Consensus 91 gis~~rv~l~pgg~~~-pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~-------~~N~G~~ 162 (224)
|.....+.+.||.-.. .-.| +-.|=+|+++|.. ..|+.++-|.|+.|. -+-. +.
T Consensus 216 G~~TrLlr~~Pg~dt~~v~iH-dy~EEvY~LeG~~----------------d~G~Y~~RPpg~~HGps~~~~ppf~S-e~ 277 (303)
T 2qdr_A 216 GGGVWLLAILPHFDNKYQMIQ-PYNEEGYCLTGYC----------------DVGDYRIVKDHYWYCPSFSTLPRHIT-DD 277 (303)
T ss_dssp SCEEEEEEECSSEECCSEEEE-CSCEEEEEEEEEE----------------EETTEEEETTEEEEECTTEEECCEEE-SS
T ss_pred CCeEEEEEECCCCCCCCceee-ccceeEEEEeeec----------------cCceeeEcCCCCccCccccCCCCcCc-CC
Confidence 4556667777876443 3446 4578899999976 338889999999998 3322 34
Q ss_pred cEEEEEEeeCC
Q 040384 163 NVLFFPSFNSQ 173 (224)
Q Consensus 163 ~a~~~~~~~s~ 173 (224)
.+.++.-.+.+
T Consensus 278 G~l~fvR~Dgd 288 (303)
T 2qdr_A 278 GGLFFVRVDRD 288 (303)
T ss_dssp CEEEEEEESSC
T ss_pred ceEEEEEeCcc
Confidence 45555555443
No 259
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=27.83 E-value=1.1e+02 Score=24.67 Aligned_cols=49 Identities=16% Similarity=0.042 Sum_probs=33.7
Q ss_pred EEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEE
Q 040384 94 TNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFL 147 (224)
Q Consensus 94 ~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~v 147 (224)
+....+.+|..+--.-. .+..+.+|++|++++.. +|+ ....+.+||++=
T Consensus 62 ~~~~~~~~g~~i~~~G~-~~~~~yiI~~G~v~v~~---~g~-~~~~~~~G~~fG 110 (299)
T 3shr_A 62 MYPVEYGKDSCIIKEGD-VGSLVYVMEDGKVEVTK---EGV-KLCTMGPGKVFG 110 (299)
T ss_dssp CEEEEECTTCEEECTTC-BCCCEEEEEESCEEEEE---TTE-EEEEECTTCEES
T ss_pred cCeEEECCCCEEEcCCC-cCceEEEEEEEEEEEEE---CCE-EEEEeCCCCeee
Confidence 34567777776533222 35789999999999842 454 457899999874
No 260
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=27.81 E-value=1.4e+02 Score=25.45 Aligned_cols=42 Identities=12% Similarity=0.159 Sum_probs=30.4
Q ss_pred CCCceEE-EEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCeeEEEe
Q 040384 112 RSSESSI-VIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVHFQLN 158 (224)
Q Consensus 112 ~a~Ei~y-Vl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H~~~N 158 (224)
...|+.+ .+.|++.+.+ +|+ ++.|..-|.+++|+|.-.....
T Consensus 77 ~~rE~~iV~l~G~~~V~v---dG~--~f~lg~~dalYVp~g~~~v~~a 119 (282)
T 1xru_A 77 ERRELGVINIGGAGTITV---DGQ--CYEIGHRDALYVGKGAKEVVFA 119 (282)
T ss_dssp TTEEEEEEECSSCEEEEE---TTE--EEEECTTCEEEECTTCCCEEEE
T ss_pred CCcEEEEEEccCeEEEEE---CCE--EEecCCCCEEEeCCCCeEEEEE
Confidence 3456665 5678988876 565 4588899999999998644443
No 261
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=27.33 E-value=3.3e+02 Score=24.14 Aligned_cols=77 Identities=9% Similarity=-0.038 Sum_probs=48.5
Q ss_pred EEEeecccCCCCccccEEEEEEEEeCCcccCc-eecCCCCceEEEEeCeEEEEEEeCCCeEEEEEECCCCEEEecCCCee
Q 040384 76 VTEGNVHEFPGVNTQGISTNRVDLAVGGINPP-HLHPRSSESSIVIRGTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVH 154 (224)
Q Consensus 76 ~~~~~~~~~P~l~~~gis~~rv~l~pgg~~~p-H~Hp~a~Ei~yVl~G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H 154 (224)
.+.+.....|-+..+ ....+++..++...- --| +.--..|.+|++++.+-.++|. .+..|.++|...+-+-+.|
T Consensus 320 Ye~AS~A~~phlPdl--~g~~l~Vd~~d~~~DL~d~--ge~hY~v~~G~lTL~W~~~dGt-~~a~L~PDgSAwv~PFV~H 394 (443)
T 3g7d_A 320 YEAASMASAAHLPDL--VGSFLRVDADGRGADLIDH--AENHYVVTEGRLTLEWDGPDGP-ASVELEPDGSAWTGPFVRH 394 (443)
T ss_dssp EEEEECCCCTTCTTC--EEEEEEEC------CBCCS--SEEEEEEEESCEEEEEEETTEE-EEEEECTTCEEEECTTCCE
T ss_pred eehhhhhccccCCCc--eeEEEEecCCCcchhhhhc--ccceEEEecCceEEEecCCCCc-cceEECCCCceeecccccc
Confidence 455566666666533 333333333322211 112 2222348899999999777766 8899999999999999999
Q ss_pred EEE
Q 040384 155 FQL 157 (224)
Q Consensus 155 ~~~ 157 (224)
.|.
T Consensus 395 ~w~ 397 (443)
T 3g7d_A 395 RWH 397 (443)
T ss_dssp EEE
T ss_pred ccc
Confidence 997
No 262
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=27.18 E-value=26 Score=27.17 Aligned_cols=10 Identities=10% Similarity=0.242 Sum_probs=6.8
Q ss_pred CCHHHHHhhc
Q 040384 191 IPNEVLTKTF 200 (224)
Q Consensus 191 ~p~evla~af 200 (224)
+.++.+.+.+
T Consensus 199 ~sr~tvsR~l 208 (230)
T 3iwz_A 199 CSREMAGRVL 208 (230)
T ss_dssp CCHHHHHHHH
T ss_pred CcHHHHHHHH
Confidence 7778777643
No 263
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=27.09 E-value=33 Score=27.25 Aligned_cols=10 Identities=0% Similarity=0.311 Sum_probs=7.4
Q ss_pred CCHHHHHhhc
Q 040384 191 IPNEVLTKTF 200 (224)
Q Consensus 191 ~p~evla~af 200 (224)
+.++.+.+.+
T Consensus 189 ~sr~tvsR~l 198 (250)
T 3e6c_C 189 VHHVTVSRVL 198 (250)
T ss_dssp CCHHHHHHHH
T ss_pred CcHHHHHHHH
Confidence 7888888654
No 264
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=26.94 E-value=55 Score=28.27 Aligned_cols=49 Identities=16% Similarity=0.062 Sum_probs=32.2
Q ss_pred EEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCCC--eEEEEEECCCCEE
Q 040384 97 VDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTDN--VFYSKVVTAGMLF 146 (224)
Q Consensus 97 v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~--~~~~~~l~~GDv~ 146 (224)
..+.+|..+--- -..+..+.+|++|++++...++++ ......+.+||+|
T Consensus 274 ~~~~~ge~I~~e-Gd~~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~Gd~f 324 (381)
T 4din_B 274 VQFEDGEKIVVQ-GEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYF 324 (381)
T ss_dssp CCBCSSCBSSCT-TSBCCEEEEEEESCEEEECCSSSSSCCCEEEEECTTCEE
T ss_pred ccCCCCCEEEeC-CCcCCEEEEEEeCEEEEEEecCCCCceEEEEEeCCCCEe
Confidence 445555544222 223578889999999988765443 2345789999987
No 265
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=26.89 E-value=27 Score=26.66 Aligned_cols=10 Identities=10% Similarity=0.268 Sum_probs=7.2
Q ss_pred CCHHHHHhhc
Q 040384 191 IPNEVLTKTF 200 (224)
Q Consensus 191 ~p~evla~af 200 (224)
+.++.+.+.+
T Consensus 179 ~sr~tvsR~l 188 (210)
T 3ryp_A 179 CSRETVGRIL 188 (210)
T ss_dssp CCHHHHHHHH
T ss_pred CcHHHHHHHH
Confidence 7888888644
No 266
>2cfx_A HTH-type transcriptional regulator LRPC; transcriptional regulation, DNA binding, FFRP; 2.4A {Bacillus subtilis} SCOP: a.4.5.32 d.58.4.2
Probab=26.57 E-value=36 Score=25.11 Aligned_cols=34 Identities=6% Similarity=0.045 Sum_probs=29.6
Q ss_pred CCCCHHHHHhhcCCCHHHHHHHHhccCCCcceec
Q 040384 189 PPIPNEVLTKTFLVGDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 189 p~~p~evla~af~v~~~~v~~l~~~~~~~~~i~r 222 (224)
+.++..-||+.+|+++.++.+..+...+.|+|.|
T Consensus 18 ~~~s~~ela~~lg~s~~tv~~~l~~L~~~G~i~~ 51 (144)
T 2cfx_A 18 SRLSMRELGRKIKLSPPSVTERVRQLESFGIIKQ 51 (144)
T ss_dssp SCCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEE
T ss_pred CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEE
Confidence 3589999999999999999998888888888865
No 267
>2pn6_A ST1022, 150AA long hypothetical transcriptional regulator; LRP/ASNC family Gln binding, structural genomics, NPPSFA; HET: GLN; 1.44A {Sulfolobus tokodaii} PDB: 2efn_A* 2e7x_A* 2e7w_A* 2yx4_A* 2efq_A* 2pmh_A* 2yx7_A* 2efp_A* 2efo_A*
Probab=26.54 E-value=34 Score=25.31 Aligned_cols=37 Identities=0% Similarity=-0.016 Sum_probs=31.3
Q ss_pred cCCCCCCHHHHHhhcCCCHHHHHHHHhccCCCcceec
Q 040384 186 NTTPPIPNEVLTKTFLVGDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 186 ~~~p~~p~evla~af~v~~~~v~~l~~~~~~~~~i~r 222 (224)
..++.++..-||+.+|+++.++.+..+...+.|+|.|
T Consensus 13 ~~~~~~~~~ela~~lg~s~~tv~~~l~~L~~~G~i~~ 49 (150)
T 2pn6_A 13 QYNAKYSLDEIAREIRIPKATLSYRIKKLEKDGVIKG 49 (150)
T ss_dssp TTCTTSCHHHHHHHHTSCHHHHHHHHHHHHHTTSSCC
T ss_pred HHcCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCcEEE
Confidence 3344689999999999999999999888888888876
No 268
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=26.13 E-value=28 Score=26.73 Aligned_cols=8 Identities=13% Similarity=0.405 Sum_probs=4.6
Q ss_pred CCHHHHHh
Q 040384 191 IPNEVLTK 198 (224)
Q Consensus 191 ~p~evla~ 198 (224)
+.++.+.+
T Consensus 175 ~sr~tvsR 182 (216)
T 4ev0_A 175 TSRETVSR 182 (216)
T ss_dssp SCHHHHHH
T ss_pred CCHHHHHH
Confidence 55555554
No 269
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=26.04 E-value=29 Score=26.57 Aligned_cols=10 Identities=30% Similarity=0.295 Sum_probs=7.2
Q ss_pred CCHHHHHhhc
Q 040384 191 IPNEVLTKTF 200 (224)
Q Consensus 191 ~p~evla~af 200 (224)
+.++.+.+.+
T Consensus 158 ~sr~tvsR~l 167 (202)
T 2zcw_A 158 SVRETVTKVI 167 (202)
T ss_dssp CCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 7888887644
No 270
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=25.87 E-value=30 Score=26.90 Aligned_cols=10 Identities=20% Similarity=0.388 Sum_probs=7.1
Q ss_pred CCHHHHHhhc
Q 040384 191 IPNEVLTKTF 200 (224)
Q Consensus 191 ~p~evla~af 200 (224)
+.++.+.+.+
T Consensus 189 ~sr~tvsR~l 198 (227)
T 3d0s_A 189 ASRETVNKAL 198 (227)
T ss_dssp SCHHHHHHHH
T ss_pred CcHHHHHHHH
Confidence 7788887644
No 271
>2lnb_A Z-DNA-binding protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, immune system; NMR {Homo sapiens}
Probab=25.33 E-value=19 Score=25.04 Aligned_cols=35 Identities=11% Similarity=0.059 Sum_probs=29.2
Q ss_pred CCCHHHHHhhcCCCHHHHHHHHhccCCCcceecCC
Q 040384 190 PIPNEVLTKTFLVGDEVINAIKAAITSAQLGHRPK 224 (224)
Q Consensus 190 ~~p~evla~af~v~~~~v~~l~~~~~~~~~i~r~~ 224 (224)
++...=+++..|++..+|++........+.|.-||
T Consensus 34 PlkageIae~~GvdKKeVdKaik~LKkEgkI~SPk 68 (80)
T 2lnb_A 34 PVKLAQLVKECQAPKRELNQVLYRMKKELKVSLTS 68 (80)
T ss_dssp CEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEE
T ss_pred CCCHHHHHHHHCCCHHHHHHHHHHHHHcCCccCCC
Confidence 47788899999999999999988888777777653
No 272
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=25.18 E-value=27 Score=27.07 Aligned_cols=10 Identities=20% Similarity=0.458 Sum_probs=7.4
Q ss_pred CCHHHHHhhc
Q 040384 191 IPNEVLTKTF 200 (224)
Q Consensus 191 ~p~evla~af 200 (224)
+.++.+.+.+
T Consensus 190 ~sr~tvsR~l 199 (227)
T 3dkw_A 190 IQPETFSRIM 199 (227)
T ss_dssp SCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 7888888644
No 273
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=25.17 E-value=31 Score=27.36 Aligned_cols=10 Identities=10% Similarity=0.149 Sum_probs=7.1
Q ss_pred CCHHHHHhhc
Q 040384 191 IPNEVLTKTF 200 (224)
Q Consensus 191 ~p~evla~af 200 (224)
+.++.+.+.+
T Consensus 205 ~sr~tvsR~l 214 (243)
T 3la7_A 205 STRVTVTRLL 214 (243)
T ss_dssp CCHHHHHHHH
T ss_pred CcHHHHHHHH
Confidence 7788887643
No 274
>1p3h_A 10 kDa chaperonin; beta barrel, acidic cluster, flexible loop, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: b.35.1.1 PDB: 1hx5_A 1lep_A 1p82_A 1p83_A
Probab=25.06 E-value=1.3e+02 Score=21.43 Aligned_cols=54 Identities=13% Similarity=0.019 Sum_probs=29.2
Q ss_pred CCcccCceecCCCCceEEEE-eCeEEEEEEeCCC-eEEEEEECCCCEEEecCCCeeEEE
Q 040384 101 VGGINPPHLHPRSSESSIVI-RGTVLVGIITTDN-VFYSKVVTAGMLFLIPRGLVHFQL 157 (224)
Q Consensus 101 pgg~~~pH~Hp~a~Ei~yVl-~G~~~v~~v~~~~-~~~~~~l~~GDv~vvP~G~~H~~~ 157 (224)
.||+..|-....-.....|+ =|.++. +.+| +.....++.||.+++++..-.-+.
T Consensus 24 ~gGI~LP~sakeKp~~G~VvAVG~G~~---~~~G~~~~p~~VkvGD~Vlf~ky~Gtevk 79 (99)
T 1p3h_A 24 ASGLVIPDTAKEKPQEGTVVAVGPGRW---DEDGEKRIPLDVAEGDTVIYSKYGGTEIK 79 (99)
T ss_dssp TTSCBCCCSSCCSEEEEEEEEECCCEE---CSSSSCEECCSCCTTCEEEEECTTCEEEE
T ss_pred cceEEeCcccccCCceEEEEEECCCcC---cCCCCEEEccccCCCCEEEECCcCCeEEE
Confidence 47777765432222222222 133321 2345 555567999999999985544443
No 275
>1s4c_A Protein HI0227; double-stranded beta-helix, structural genomics, unknown function, structural genomics, unknown function; 2.20A {Haemophilus influenzae} SCOP: b.82.2.7 PDB: 1jop_A
Probab=25.01 E-value=98 Score=23.41 Aligned_cols=53 Identities=17% Similarity=0.176 Sum_probs=37.5
Q ss_pred cCceecCCCCceEEEEeCeEEEEEEeCCC--------------eE-------EEEEECCCCEEEecCCCeeEEE
Q 040384 105 NPPHLHPRSSESSIVIRGTVLVGIITTDN--------------VF-------YSKVVTAGMLFLIPRGLVHFQL 157 (224)
Q Consensus 105 ~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~~--------------~~-------~~~~l~~GDv~vvP~G~~H~~~ 157 (224)
..+=.|.+--.+-|+++|+=++++....+ .. ....|++|+..++-++-+|.-.
T Consensus 60 ~~~E~Hr~YiDIq~~l~G~E~i~~~~~~~~~~~~~~y~~e~D~~~~~~~~~~~~v~l~~G~FaiFfP~d~H~p~ 133 (155)
T 1s4c_A 60 KKAELHHEYLDVQVLIRGTENIEVGATYPNLSKYEDYNEADDYQLCADIDDKFTVTMKPKMFAVFYPYEPHKPC 133 (155)
T ss_dssp SCEEECSSEEEEEEEEESCEEEEECCSCCCGGGSCCCBTTTTBEEESCCTTCEEEEECTTEEEEECTTCCEEEE
T ss_pred cccccccceEEEEecceeeEEEEEEecccCcccCCCCCcCCCEEecCCCCccEEEEeCCCEEEEECCCcccccc
Confidence 45566777778889999987777754211 01 2357899999999999999853
No 276
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=24.92 E-value=25 Score=26.79 Aligned_cols=10 Identities=20% Similarity=0.235 Sum_probs=7.5
Q ss_pred CCHHHHHhhc
Q 040384 191 IPNEVLTKTF 200 (224)
Q Consensus 191 ~p~evla~af 200 (224)
++++.+.+.+
T Consensus 151 ~sr~tvsR~l 160 (195)
T 3b02_A 151 SIRESVSKVL 160 (195)
T ss_dssp SCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 7888888654
No 277
>1qbj_A Protein (double-stranded RNA specific adenosine D (ADAR1)); protein-Z-DNA complex, hydrolase-DNA complex; HET: DNA; 2.10A {Homo sapiens} SCOP: a.4.5.19 PDB: 3f21_A* 3f22_A* 3f23_A* 3irr_A* 3irq_D* 2gxb_A 2acj_A 2l54_A
Probab=24.22 E-value=31 Score=23.60 Aligned_cols=33 Identities=9% Similarity=0.042 Sum_probs=28.2
Q ss_pred CCCHHHHHhhcCCCHHHHHHHHhccCCCcceec
Q 040384 190 PIPNEVLTKTFLVGDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 190 ~~p~evla~af~v~~~~v~~l~~~~~~~~~i~r 222 (224)
.++..-||+.++++..+|++-.......++|.+
T Consensus 27 ~~t~~eLA~~Lgvsr~tV~~~L~~Le~~G~I~~ 59 (81)
T 1qbj_A 27 ATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQK 59 (81)
T ss_dssp CBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEE
T ss_pred CcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEe
Confidence 588899999999999999998888777777754
No 278
>2htj_A P fimbrial regulatory protein KS71A; winged helix-turn-helix, PAP PILI, transcription activator; NMR {Escherichia coli} SCOP: a.4.5.73
Probab=23.46 E-value=34 Score=22.65 Aligned_cols=32 Identities=9% Similarity=-0.021 Sum_probs=27.5
Q ss_pred CCCHHHHHhhcCCCHHHHHHHHhccCCCccee
Q 040384 190 PIPNEVLTKTFLVGDEVINAIKAAITSAQLGH 221 (224)
Q Consensus 190 ~~p~evla~af~v~~~~v~~l~~~~~~~~~i~ 221 (224)
++...-||+.++++..++.+..+...+.++|.
T Consensus 14 ~~s~~eLa~~lgvs~~tv~r~L~~L~~~GlI~ 45 (81)
T 2htj_A 14 GGKTAEIAEALAVTDYQARYYLLLLEKAGMVQ 45 (81)
T ss_dssp CCCHHHHHHHHTSCHHHHHHHHHHHHHHTSEE
T ss_pred CCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEE
Confidence 48888999999999999999888777777776
No 279
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=23.46 E-value=31 Score=27.09 Aligned_cols=10 Identities=20% Similarity=0.122 Sum_probs=7.1
Q ss_pred CCHHHHHhhc
Q 040384 191 IPNEVLTKTF 200 (224)
Q Consensus 191 ~p~evla~af 200 (224)
+.++.+.+.+
T Consensus 198 ~sr~tvsR~l 207 (232)
T 1zyb_A 198 DTRLNISKTL 207 (232)
T ss_dssp SCHHHHHHHH
T ss_pred CChhHHHHHH
Confidence 7888887643
No 280
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=23.39 E-value=40 Score=27.13 Aligned_cols=10 Identities=20% Similarity=0.102 Sum_probs=0.0
Q ss_pred ccCCCCCCCC
Q 040384 42 VNGFPCKPET 51 (224)
Q Consensus 42 ~~g~~ck~~~ 51 (224)
+.|.-||+.+
T Consensus 13 ~~~~~~~~~~ 22 (260)
T 3kcc_A 13 PRGSGMKETA 22 (260)
T ss_dssp ----------
T ss_pred cCCccchhhh
Confidence 3444555543
No 281
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=23.12 E-value=1.3e+02 Score=24.72 Aligned_cols=63 Identities=19% Similarity=0.116 Sum_probs=37.4
Q ss_pred EEEEEEEeCCcccCceecCC------------CCceEEEEe------CeEEEEEEeCCCeEEEEEECCCCEEEecCCCee
Q 040384 93 STNRVDLAVGGINPPHLHPR------------SSESSIVIR------GTVLVGIITTDNVFYSKVVTAGMLFLIPRGLVH 154 (224)
Q Consensus 93 s~~rv~l~pgg~~~pH~Hp~------------a~Ei~yVl~------G~~~v~~v~~~~~~~~~~l~~GDv~vvP~G~~H 154 (224)
..-...+.+|+...+|+--- .+-++|.-. |+..+ .+.. .......++|+++++|.+..|
T Consensus 100 ~~~~~rY~~G~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf--~~~~-~~~~V~P~~G~~v~F~s~~lH 176 (243)
T 3dkq_A 100 PPLFNRYQGGETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVI--QDTY-GQQSIKLSAGSLVLYPSSSLH 176 (243)
T ss_dssp EEEEEEECTTCEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEE--EETT-EEEEECCCTTCEEEEETTSEE
T ss_pred cceEEEECCCCeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEE--eeCC-CcEEEecCCCEEEEECCCCeE
Confidence 35566788999988886411 111222222 22221 1111 123466799999999999999
Q ss_pred EEEe
Q 040384 155 FQLN 158 (224)
Q Consensus 155 ~~~N 158 (224)
...-
T Consensus 177 ~v~p 180 (243)
T 3dkq_A 177 QVTP 180 (243)
T ss_dssp EECC
T ss_pred cCcc
Confidence 9754
No 282
>2p5v_A Transcriptional regulator, LRP/ASNC family; NMB0573, structu genomics; 1.99A {Neisseria meningitidis} PDB: 2p6s_A 2p6t_A
Probab=22.49 E-value=47 Score=24.98 Aligned_cols=34 Identities=9% Similarity=0.023 Sum_probs=29.6
Q ss_pred CCCCHHHHHhhcCCCHHHHHHHHhccCCCcceec
Q 040384 189 PPIPNEVLTKTFLVGDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 189 p~~p~evla~af~v~~~~v~~l~~~~~~~~~i~r 222 (224)
+.++..-||+.+|+++.++.+..+...+.|+|.|
T Consensus 23 ~~~s~~ela~~lg~s~~tv~~~l~~L~~~G~i~~ 56 (162)
T 2p5v_A 23 GRLTNVELSERVALSPSPCLRRLKQLEDAGIVRQ 56 (162)
T ss_dssp TTCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEE
T ss_pred CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEee
Confidence 3589999999999999999998888888888865
No 283
>2dbb_A Putative HTH-type transcriptional regulator PH006; ASNC family, helix-turn-helix (HTH) domain, structural genom NPPSFA; 2.00A {Pyrococcus horikoshii}
Probab=22.41 E-value=39 Score=25.00 Aligned_cols=35 Identities=6% Similarity=0.022 Sum_probs=29.2
Q ss_pred CCCCCHHHHHhhcCCCHHHHHHHHhccCCCcceec
Q 040384 188 TPPIPNEVLTKTFLVGDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 188 ~p~~p~evla~af~v~~~~v~~l~~~~~~~~~i~r 222 (224)
++.++..-||+.+|+++.++.+..+...+.|+|.|
T Consensus 21 ~~~~s~~ela~~lg~s~~tv~~~l~~L~~~G~i~~ 55 (151)
T 2dbb_A 21 NSRLTYRELADILNTTRQRIARRIDKLKKLGIIRK 55 (151)
T ss_dssp CTTCCHHHHHHHTTSCHHHHHHHHHHHHHHTSEEE
T ss_pred cCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEE
Confidence 34589999999999999999988887777777764
No 284
>2y75_A HTH-type transcriptional regulator CYMR; DNA binding protein; 2.00A {Bacillus subtilis}
Probab=21.78 E-value=51 Score=23.75 Aligned_cols=33 Identities=12% Similarity=0.225 Sum_probs=28.8
Q ss_pred CCCHHHHHhhcCCCHHHHHHHHhccCCCcceec
Q 040384 190 PIPNEVLTKTFLVGDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 190 ~~p~evla~af~v~~~~v~~l~~~~~~~~~i~r 222 (224)
.++.+-||+.++++...++++.+.....|+|..
T Consensus 26 ~~s~~ela~~~~i~~~~v~~il~~L~~~Glv~~ 58 (129)
T 2y75_A 26 PTSLKSIAQTNNLSEHYLEQLVSPLRNAGLVKS 58 (129)
T ss_dssp CBCHHHHHHHTTSCHHHHHHHHHHHHHTTSEEE
T ss_pred cCCHHHHHHHHCcCHHHHHHHHHHHHHCCceEe
Confidence 478889999999999999999988888887754
No 285
>1qgp_A Protein (double stranded RNA adenosine deaminase); Z-alpha-Z-DNA binding domain, RNA-editing, Z-DNA recognition, ADAR1, helix- turn-helix; NMR {Homo sapiens} SCOP: a.4.5.19
Probab=21.01 E-value=27 Score=23.49 Aligned_cols=33 Identities=9% Similarity=0.042 Sum_probs=27.9
Q ss_pred CCCHHHHHhhcCCCHHHHHHHHhccCCCcceec
Q 040384 190 PIPNEVLTKTFLVGDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 190 ~~p~evla~af~v~~~~v~~l~~~~~~~~~i~r 222 (224)
.++..-||+.++++..+|++........++|.|
T Consensus 31 ~~t~~eLA~~Lgvs~~tV~~~L~~L~~~G~I~~ 63 (77)
T 1qgp_A 31 ATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQK 63 (77)
T ss_dssp CEEHHHHHHHHCCCHHHHHHHHHHHHHHTSEEE
T ss_pred CcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEe
Confidence 588899999999999999998887777777654
No 286
>2ia0_A Putative HTH-type transcriptional regulator PF086; ASNC, PSI, structural genomics, southeast collaboratory for structural genomics; 2.37A {Pyrococcus furiosus}
Probab=20.94 E-value=52 Score=25.29 Aligned_cols=35 Identities=9% Similarity=0.054 Sum_probs=30.2
Q ss_pred CCCCCHHHHHhhcCCCHHHHHHHHhccCCCcceec
Q 040384 188 TPPIPNEVLTKTFLVGDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 188 ~p~~p~evla~af~v~~~~v~~l~~~~~~~~~i~r 222 (224)
++.++..-||+.+++++.++.+..+...+.|+|.|
T Consensus 29 ~~~~s~~eLA~~lglS~~tv~~~l~~L~~~G~I~~ 63 (171)
T 2ia0_A 29 DARLTISELSEQLKKPESTIHFRIKKLQERGVIER 63 (171)
T ss_dssp CTTCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEE
T ss_pred cCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEe
Confidence 34589999999999999999998888888888864
No 287
>2w25_A Probable transcriptional regulatory protein; transcription regulation, mutant, RV3291C, Glu104Ala, DNA-binding; 2.15A {Mycobacterium tuberculosis} PDB: 2vbw_A* 2vbx_A* 2vby_A* 2vbz_A* 2vc0_A 2vc1_A 2w24_A 2ivm_A 2w29_A 2qz8_A
Probab=20.68 E-value=54 Score=24.21 Aligned_cols=33 Identities=6% Similarity=-0.071 Sum_probs=29.2
Q ss_pred CCCHHHHHhhcCCCHHHHHHHHhccCCCcceec
Q 040384 190 PIPNEVLTKTFLVGDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 190 ~~p~evla~af~v~~~~v~~l~~~~~~~~~i~r 222 (224)
.++..-||+.+++++.++.+..+...+.|+|.|
T Consensus 21 ~~s~~ela~~lg~s~~tv~~~l~~L~~~G~i~~ 53 (150)
T 2w25_A 21 RATLSELATRAGLSVSAVQSRVRRLESRGVVQG 53 (150)
T ss_dssp TCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEE
T ss_pred CCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEE
Confidence 589999999999999999999888888888864
No 288
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=20.46 E-value=74 Score=27.91 Aligned_cols=52 Identities=15% Similarity=0.019 Sum_probs=32.4
Q ss_pred EEEEEEeCCcccCceecCCCCceEEEEeCeEEEEEEeCC------C-eEEEEEECCCCEE
Q 040384 94 TNRVDLAVGGINPPHLHPRSSESSIVIRGTVLVGIITTD------N-VFYSKVVTAGMLF 146 (224)
Q Consensus 94 ~~rv~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~v~~~------~-~~~~~~l~~GDv~ 146 (224)
+....+.+|..+-. --..+..+.+|++|++++...+.+ | ......+.+||+|
T Consensus 290 l~~~~~~~Ge~I~~-eGd~~~~~yiI~sG~v~v~~~~~~~~~~~~g~~~~l~~l~~G~~f 348 (416)
T 3tnp_B 290 IGTKVYNDGEQIIA-QGDLADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFRGQYF 348 (416)
T ss_dssp CEEEEECTTCEEEC-TTSCCCEEEEEEEEEEEEECC------------CEEEEECTTCEE
T ss_pred ceEEEECCCCEEEe-CCCcCCEEEEEEeCEEEEEEecCCcccccCCceeEEEEeCCCCEe
Confidence 34556677765432 222457888999999998765543 3 2345788999987
No 289
>2d1h_A ST1889, 109AA long hypothetical transcriptional regulator; helix-turn-helix, intermolecular and intramolecular S-S bond structural genomics; 2.05A {Sulfolobus tokodaii} SCOP: a.4.5.50
Probab=20.26 E-value=40 Score=22.81 Aligned_cols=34 Identities=21% Similarity=0.279 Sum_probs=29.1
Q ss_pred CCCCHHHHHhhcCCCHHHHHHHHhccCCCcceec
Q 040384 189 PPIPNEVLTKTFLVGDEVINAIKAAITSAQLGHR 222 (224)
Q Consensus 189 p~~p~evla~af~v~~~~v~~l~~~~~~~~~i~r 222 (224)
++++..-|++.++++..++.+..+...+.++|.|
T Consensus 35 ~~~t~~ela~~l~is~~tv~~~l~~L~~~g~v~~ 68 (109)
T 2d1h_A 35 KPITSEELADIFKLSKTTVENSLKKLIELGLVVR 68 (109)
T ss_dssp SCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEE
T ss_pred CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEe
Confidence 3588899999999999999999888877777765
Done!