BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040385
(827 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O22207|UBP5_ARATH Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana
GN=UBP5 PE=1 SV=2
Length = 924
Score = 1127 bits (2916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/880 (64%), Positives = 665/880 (75%), Gaps = 65/880 (7%)
Query: 1 WWQHWIDYVNQDQPNNTGDGSSLLEHFNSAGSSASKRPSGIDNSDLVNDATAEDPGAGPE 60
WWQ WI+YVNQDQP NT DGSSL EH +S GSS K+PS IDNSDL+ D++ EDP E
Sbjct: 48 WWQEWIEYVNQDQPCNTNDGSSLSEHCDSPGSSTLKKPSRIDNSDLIYDSSLEDPSNTSE 107
Query: 61 IVDTLLEGRDYILLPQEVWNQLHSWYGGGPTLARKVISSGLSQTELAVEVYPLRLQLLVM 120
I++TL EGRDY+LLPQEVWNQL SWYGGGPTLAR+VISSGLSQTELAVEVYPLRLQLL+M
Sbjct: 108 IIETLQEGRDYVLLPQEVWNQLRSWYGGGPTLARRVISSGLSQTELAVEVYPLRLQLLLM 167
Query: 121 PRGECSTIRISKKETIGELHRRACSIFYLNLEQICIWDYYGHRKHALMNDMDRTLDDANI 180
P+ + S IRISKKETI ELHRRAC IF L+ E + IWDYYGH+K++LMND+D+TLDDAN+
Sbjct: 168 PKSDHSAIRISKKETIRELHRRACEIFDLDSEHVRIWDYYGHQKYSLMNDLDKTLDDANL 227
Query: 181 QMDQDILVEVLDNVNGTNCKSSIQ---DNGFAEKKASSVLVEPSKSSLSIAGGWSASKGT 237
QMDQDILVEVLD +NGT + IQ +NG + ++S+L+EPSKSSL+ AGG+S+S+
Sbjct: 228 QMDQDILVEVLD-INGTLSSAHIQSAQENGLVDGDSTSILIEPSKSSLAAAGGFSSSRNA 286
Query: 238 SRNHSSEISTSPNLASARDSDNTLGSSGVTTRGASVGLTGLLNLGNTCFMNSAIQCLVHT 297
R S E+S S DNT S+GVTTRG++ GLTGLLNLGNTCFMNSAIQCLVHT
Sbjct: 287 FRTGSVEVSQS--------FDNTYSSTGVTTRGSTAGLTGLLNLGNTCFMNSAIQCLVHT 338
Query: 298 PEFARYFREDYRREINWQNPLGMV------------------------------------ 321
PEFA YF+EDY +EINWQNPLGMV
Sbjct: 339 PEFASYFQEDYHQEINWQNPLGMVGELALAFGDLLRKLWAPGRTPIAPRPFKAKLARFAP 398
Query: 322 -----------ELLAFLLDGLHEDLNRVKHKPYIKSKDADGRPDEEVADEYWANHIARND 370
ELLAFLLDGLHEDLNRVKHKPYI S+DADGRPDEEVADE+W NHIARND
Sbjct: 399 QFSGYNQHDSQELLAFLLDGLHEDLNRVKHKPYINSRDADGRPDEEVADEFWKNHIARND 458
Query: 371 SIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQATTTRTMTVTVFTSDGSALPST 430
SIIVDVCQGQYKSTLVCP+CNKVSVTFDPFMYLSLPLQ TTR +TVTVF+ D +ALPST
Sbjct: 459 SIIVDVCQGQYKSTLVCPICNKVSVTFDPFMYLSLPLQFNTTRAITVTVFSCDKTALPST 518
Query: 431 YTVTVPKHGRCRDLIQVLGNICSLKQSEELKVAEIQNHSIQRFLDDPLISLSTIKDDDHL 490
TV V K GRCRDLIQ L N CSLKQSEELK+AEI+N+ I R +DPLI LS+IKDDDHL
Sbjct: 519 ITVNVSKQGRCRDLIQALTNACSLKQSEELKLAEIRNNFIHRLFEDPLIPLSSIKDDDHL 578
Query: 491 AAYRVPKLVKKAVFLQLIHRLQEQEPGAAQTTSQWKAYGTPLVSSISRDDVISSGKIQST 550
AAY++ K + L+L+ R ++Q+ G ++T Q K GTPL+SS S D ++ GKI
Sbjct: 579 AAYKLSKSSENTTLLRLVLRRRDQKAGERESTVQLKPCGTPLLSSASCGDALTKGKIHCL 638
Query: 551 VQRMLSPFLKKESL---MHADSFDPSSMVTTVDPSGEAHSNSSSNIAKEDASSSKAVTLP 607
VQ MLSPF ++ES+ ++DS P + + E + + K S+S +
Sbjct: 639 VQNMLSPFRREESVGKKGNSDSSIPERRSARFNNTEE--EDKVGGLKKAKKSNSSDLGAS 696
Query: 608 NLPLQLVDESNVCFDLSVEGDKTIRIPSSSTSIVVYVDWSQKLLEKYNTHFLENLLEVFK 667
L LQL+DE N +L + +++PSS+T + +Y+DW+ +L Y+ LE+L EV K
Sbjct: 697 KLSLQLIDEDNKTINLPDNEAEAMKLPSSAT-VTIYLDWTPELSGMYDITCLESLPEVLK 755
Query: 668 NGPVTKKARTEPLSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVI 727
GP TKKAR+EPLSLY CLEAFLREEPLVP++MW+CPQC ERRQASKKLDLWRLPEVLVI
Sbjct: 756 YGPTTKKARSEPLSLYACLEAFLREEPLVPDEMWFCPQCNERRQASKKLDLWRLPEVLVI 815
Query: 728 HLKRFSYSRSMKHKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHY 787
HLKRFSYSRSMKHKLETFVNFPIHD +LTKYVANKN S+ QLYELYALTNHYGGMGSGHY
Sbjct: 816 HLKRFSYSRSMKHKLETFVNFPIHDLDLTKYVANKNLSQPQLYELYALTNHYGGMGSGHY 875
Query: 788 TAHIKLLDENRWYNFDDSHISPINEDDVKSAAAYVLFYRR 827
TAHIKLLD++RWYNFDDSHIS INEDDVKS AAYVLFYRR
Sbjct: 876 TAHIKLLDDSRWYNFDDSHISHINEDDVKSGAAYVLFYRR 915
>sp|Q93Y01|UBP9_ARATH Ubiquitin carboxyl-terminal hydrolase 9 OS=Arabidopsis thaliana
GN=UBP9 PE=2 SV=1
Length = 910
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/880 (44%), Positives = 541/880 (61%), Gaps = 91/880 (10%)
Query: 1 WWQHWIDYVNQDQPNNTGDGSSLLEHFNSAGSSASKRPSGIDNSDLVNDATAEDPGAGPE 60
W+ W YV Q + + S SS + RP IDN D++ +E P+
Sbjct: 52 WYTSWEKYVEQST-----------KEYISGESSEASRPGPIDNHDIIE---SESDVNDPQ 97
Query: 61 IVDTLLEGRDYILLPQEVWNQLHSWYGGGPTLARKVISSGLSQTELAVEVYPLRLQLLVM 120
+ L+E DY+L+PQEVW +L WY GGP + RK+I G +VEVYPL L +L
Sbjct: 98 LRRLLMERVDYVLVPQEVWKRLVEWYSGGPPIERKLICQGFYTRSYSVEVYPLCL-MLTD 156
Query: 121 PRGECST-IRISKKETIGELHRRACSIFYLNLEQICIWDYYGHRKHALMNDMD-RTLDDA 178
R E T IR+ K+ +I EL+ + C++ + E+ IWDY+ RK+ L++ + ++L+++
Sbjct: 157 GRDESRTVIRLGKQASIRELYEKVCALTGVPQEKAHIWDYFDKRKNGLLDSLSYKSLEES 216
Query: 179 NIQMDQDILVEVLDNVNGTNCKSSIQDNGFAEKKASSVLVEPSKSSLSIAGGWSASKGTS 238
++ MDQDIL+EV D + + S N A V +EPS+SS++IAGG + S G S
Sbjct: 217 SLHMDQDILLEV-DGSSSSQSAMSSTGNELA-----LVPLEPSRSSVTIAGGPTLSNGHS 270
Query: 239 RNHSSEISTSPNLASARDSDNTLGSSGVTTRGASVGLTGLLNLGNTCFMNSAIQCLVHTP 298
+S S P + S D N+L G +G GL GL NLGNTCFMNSA+QCL HTP
Sbjct: 271 T--TSNFSLFPRITSEDDGSNSLSILG---KGEKGGLAGLSNLGNTCFMNSALQCLAHTP 325
Query: 299 EFARYFREDYRREINWQNPLGMV------------------------------------- 321
YF +DY +IN NPLGM
Sbjct: 326 PIVEYFLQDYSDDINRDNPLGMCGELAIAFGDLLKKLWSSGRNSVAPRAFKTKLARFAPQ 385
Query: 322 ----------ELLAFLLDGLHEDLNRVKHKPYIKSKDADGRPDEEVADEYWANHIARNDS 371
ELLAFLLDGLHEDLN+VK KPYI+ KD+D RPD+EVA+E W H ARNDS
Sbjct: 386 FSGYNQHDSQELLAFLLDGLHEDLNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDS 445
Query: 372 IIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQATTTRTMTVTVFTSDGSALPSTY 431
+IVDVCQGQYKSTLVCP C K+S+TFDPFMYLS+PL +T TR+MTVTVF DGS LP Y
Sbjct: 446 VIVDVCQGQYKSTLVCPACGKISITFDPFMYLSVPLPSTLTRSMTVTVFYCDGSHLPMPY 505
Query: 432 TVTVPKHGRCRDLIQVLGNICSLKQSEELKVAEIQNHSIQRFLDDPLISLSTIKDDDHLA 491
TV VPK+G RDLI LG C L + E L +AE+ +H I ++ ++PL SLS+IKDD+H+
Sbjct: 506 TVIVPKNGSIRDLITALGTACLLAEDESLLLAEVYDHKIFKYFENPLDSLSSIKDDEHIV 565
Query: 492 AYRVPKLVKKA--VFLQLIHRLQEQEPGAAQTTSQWKAYGTPLVSSISRDDVISSGKIQS 549
AYR+ ++ K + L+++H Q++ + K +GTP V+ ++ + +S I +
Sbjct: 566 AYRLNQMPKGSGKAKLEILHGGQKRPILESVRGRDVKLFGTPFVTYVNTEP-LSGADIDA 624
Query: 550 TVQRMLSPFLK--KESLMHADSFDPSSMVTTVDPSGEAHSNSSSNIAKEDASSSKAVTLP 607
+ R LSP K S +H S + TVD + E S+ + I +DAS +
Sbjct: 625 VLSRFLSPLHKVHAPSKIHNGSENGHLPDATVDEASEILSSPDTEI--DDASDREL---- 678
Query: 608 NLPLQLVDESNVCFDLSVEGDKTIRIPSSSTSIVVYVDWSQKLLEKYNTHFLENLLEVFK 667
+ + L DE + F ++ + +I + + V V+W++ E+Y++ +L +L EV K
Sbjct: 679 SFRIFLTDERGLNFK-PLQSESSISL---GIATRVLVEWNEGEHERYDSSYLSDLPEVHK 734
Query: 668 NGPVTKKARTEPLSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVI 727
KK R E +SL++CLEAFL EEPL P+DMW+CP CKE RQA+KKLDLW+LP++LV
Sbjct: 735 TSFSAKKTRQESISLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVF 794
Query: 728 HLKRFSYSRSMKHKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHY 787
HLKRF+YSR +K+K++TFVNFP+HD +L+KYV NKN + LYELYA++NHYGG+G GHY
Sbjct: 795 HLKRFTYSRYLKNKIDTFVNFPVHDLDLSKYVKNKN-DQSYLYELYAVSNHYGGLGGGHY 853
Query: 788 TAHIKLLDENRWYNFDDSHISPINEDDVKSAAAYVLFYRR 827
TA+ KL+D+N WY+FDDSH+S +NE ++K++AAYVLFYRR
Sbjct: 854 TAYAKLIDDNEWYHFDDSHVSSVNESEIKNSAAYVLFYRR 893
>sp|Q9ZSB5|UBP10_ARATH Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana
GN=UBP10 PE=2 SV=2
Length = 923
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/882 (44%), Positives = 541/882 (61%), Gaps = 94/882 (10%)
Query: 1 WWQHWIDYVNQDQPNNTGDGSSLLEHFNSAGSSASKRPSGIDNSDLV-NDATAEDPGAGP 59
W+ W +YV ++ N G S S + RP IDN D++ +D+ DP
Sbjct: 52 WYTSWQEYV-ENSANECSTGES----------SEAPRPGPIDNHDIIESDSDINDP---- 96
Query: 60 EIVDTLLEGRDYILLPQEVWNQLHSWYGGGPTLARKVISSGLSQTELAVEVYPLRLQLLV 119
++ L+EG DY+L+P++VW +L WY GGP + RK+I G +VEVYPL L +L
Sbjct: 97 QLRRLLVEGEDYVLVPKQVWKRLVEWYSGGPPIERKLICQGFYTRSYSVEVYPLCL-MLT 155
Query: 120 MPRGECST-IRISKKETIGELHRRACSIFYLNLEQICIWDYYGHRKHALMNDMD-RTLDD 177
R E T IR+ K+ +I EL+ + C++ + E+ IWDY+ RK+ L++ + ++L++
Sbjct: 156 DGRDESRTVIRLGKQASIRELYEKVCAMTGVPQEKAHIWDYFDKRKNGLLDPLSYKSLEE 215
Query: 178 ANIQMDQDILVEVLDNVNGTNCKSSIQDNGFAEKKASSVLVEPSKSSLSIAGGWSASKGT 237
+++ MDQDILVEV + + S N A V +EPS+S ++IAGG + S G
Sbjct: 216 SSLHMDQDILVEVDGLSSSSQSAMSSTGNELA-----LVPLEPSRSIVTIAGGPTLSNGH 270
Query: 238 SRNHSSEISTSPNLASARDSDNTLGSSGVTTRGASVGLTGLLNLGNTCFMNSAIQCLVHT 297
S +S S P + S D ++L G +G GL GL NLGNTCFMNSA+QCL HT
Sbjct: 271 ST--TSNFSLFPRITSEDDGRDSLSILG---KGEKGGLAGLSNLGNTCFMNSALQCLAHT 325
Query: 298 PEFARYFREDYRREINWQNPLGMV------------------------------------ 321
P YF +DY +IN NPLGM
Sbjct: 326 PPIVEYFLQDYSDDINRDNPLGMCGELAIAFGDLLKKLWSSGRNAVAPRAFKTKLARFAP 385
Query: 322 -----------ELLAFLLDGLHEDLNRVKHKPYIKSKDADGRPDEEVADEYWANHIARND 370
ELLAFLLDGLHEDLN+VK KPYI+ KD+D RPD+EVA+E W H ARND
Sbjct: 386 QFSGYNQHDSQELLAFLLDGLHEDLNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARND 445
Query: 371 SIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQATTTRTMTVTVFTSDGSALPST 430
S+IVDVCQGQYKSTLVCPVC K+S+TFDPFMYLS+PL +T TR+MT+TVF DGS LP
Sbjct: 446 SVIVDVCQGQYKSTLVCPVCGKISITFDPFMYLSVPLPSTLTRSMTITVFYCDGSRLPMP 505
Query: 431 YTVTVPKHGRCRDLIQVLGNICSLKQSEELKVAEIQNHSIQRFLDDPLISLSTIKDDDHL 490
YTV VPK G RDLI LG C L + E L +AE+ +H I R+ + PL SLS IKDD+H+
Sbjct: 506 YTVIVPKQGSIRDLITALGTACCLAEDESLLLAEVYDHKIFRYFEIPLDSLSAIKDDEHI 565
Query: 491 AAYR---VPKLVKKAVFLQLIHRLQEQEPGAAQTTSQWKAYGTPLVSSISRDDVISSGKI 547
AYR +PK +KA L+++H QE+ + S K +GTP V+ ++ + +S I
Sbjct: 566 VAYRLNQIPKGSRKAK-LEILHGGQERAVLDSVRGSDVKLFGTPFVTYVNTEP-LSGTDI 623
Query: 548 QSTVQRMLSPFLK--KESLMHADSFDPSSMVTTVDPSGEAHSNSSSNIAKEDASSSKAVT 605
+ + LSP K S +H S + TVD + S+ + I D +S + ++
Sbjct: 624 DAVISGFLSPLHKVHAPSKIHNGSDNGHLADATVDQASGILSSPDTEI---DNASDRELS 680
Query: 606 LPNLPLQLVDESNVCFDLSVEGDKTIRIPSSSTSIVVYVDWSQKLLEKYNTHFLENLLEV 665
+ L DE L+++ ++ S T V V+W++ E+Y++ +L +L EV
Sbjct: 681 ---FRIFLTDERG----LNIKPLQSESSISPGTVTRVLVEWNEGEHERYDSSYLSDLPEV 733
Query: 666 FKNGPVTKKARTEPLSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVL 725
K KK R E +SL++CLEAFL EEPL P+DMW+CP CKE RQA+KKLDLW+LP++L
Sbjct: 734 HKTSFSAKKTRQESISLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDIL 793
Query: 726 VIHLKRFSYSRSMKHKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSG 785
V HLKRF+YSR +K+K++TFVNFP+HD +L+KYV NKN + LYELYA++NHYGG+G G
Sbjct: 794 VFHLKRFTYSRYLKNKIDTFVNFPVHDLDLSKYVKNKN-GQSYLYELYAVSNHYGGLGGG 852
Query: 786 HYTAHIKLLDENRWYNFDDSHISPINEDDVKSAAAYVLFYRR 827
HYTA+ KL+D+N+WY+FDDSH+S +NE +++++AAYVLFYRR
Sbjct: 853 HYTAYAKLIDDNKWYHFDDSHVSSVNESEIRNSAAYVLFYRR 894
>sp|Q9MAQ3|UBP11_ARATH Putative ubiquitin carboxyl-terminal hydrolase 11 OS=Arabidopsis
thaliana GN=UBP11 PE=3 SV=2
Length = 892
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/880 (42%), Positives = 522/880 (59%), Gaps = 103/880 (11%)
Query: 1 WWQHWIDYVNQDQPNNTGDGSSLLEHFNSAGSSASKRPSGIDNSDLVNDATAEDPGAGPE 60
W+ W +V L E F S S RP IDN D+++ +E + P+
Sbjct: 50 WYTRWQRFVGL-----------LTEEFRSGEPSEVTRPGPIDNHDIID---SESDASDPQ 95
Query: 61 IVDTLLEGRDYILLPQEVWNQLHSWYGGGPTLARKVISSGLSQTELAVEVYPLRLQLLVM 120
+ L EG DY L+ QEVW +L WY GGP + RK+IS G +VEVY L L L
Sbjct: 96 LRMMLEEGVDYTLVQQEVWRKLVKWYKGGPPVPRKLISQGFYTKSFSVEVYLLCLTLTDS 155
Query: 121 PRGECSTIRISKKETIGELHRRACSIFYLNLEQICIWDYYGHRKHALMN-DMDRTLDDAN 179
+ IR+SK+ +IG+L+ C+ + E+ IWDY+ +K L++ ++++++A
Sbjct: 156 RDESTTIIRLSKQASIGQLYEMVCAGKGVAKEKARIWDYFEKKKSVLLDPSSEQSVEEAG 215
Query: 180 IQMDQDILVEVLDNVNGTNCKSSIQDNGFAEKKASSVLVEPSKSSLS--IAGGWSASKGT 237
+Q +QDIL+EV +G+ + AE + + V +EP +S + GG + S G
Sbjct: 216 LQFNQDILLEV----DGSASSQFVM--SLAENELAMVPLEPMRSDAMDIVRGGGTLSNG- 268
Query: 238 SRNHSSEISTSPNLASARDSDNTLGSSGVTTRGASVGLTGLLNLGNTCFMNSAIQCLVHT 297
HS+ S R++ SS +G GL GL NLGNTCFMNS +QCL HT
Sbjct: 269 ---HSNGFKFS---FFGRNTFKDDVSSRTFGKGEKRGLGGLQNLGNTCFMNSTLQCLAHT 322
Query: 298 PEFARYFREDYRREINWQNPLGM------------------------------------- 320
P YF +DYR +IN +NPLGM
Sbjct: 323 PPIVEYFLQDYRSDINAKNPLGMRGELAIAFGELLRKLWSSGQNTVAPRAFKTKLARFAP 382
Query: 321 ----------VELLAFLLDGLHEDLNRVKHKPYIKSKDADGRPDEEVADEYWANHIARND 370
E+LAFLLDGLHEDLN+VK KPYI++KD+DGRPD+EVA+E W H ARND
Sbjct: 383 QFSGYNQHDSQEMLAFLLDGLHEDLNKVKRKPYIEAKDSDGRPDDEVAEEKWKYHKARND 442
Query: 371 SIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQATTTRTMTVTVFTSDGSALPST 430
S+IVDV QGQYKSTLVCP C K+S+TFDPFMYLSLPL ++ TR+MTVTVF DGS LP
Sbjct: 443 SVIVDVFQGQYKSTLVCPDCGKISITFDPFMYLSLPLPSSRTRSMTVTVFYGDGSHLPMP 502
Query: 431 YTVTVPKHGRCRDLIQVLGNICSLKQSEELKVAEIQNHSIQRFLDDPLISLSTIKDDDHL 490
YTVTVPK G CRDL LG C L E L +AE+ +H + ++ ++P L+ IKD++H+
Sbjct: 503 YTVTVPKDGSCRDLSNALGTACCLDNDESLLLAEVYDHKVFKYYENPRELLNGIKDNEHI 562
Query: 491 AAYRVPKLVK--KAVFLQLIHRLQEQEPGAAQTTSQWKAYGTPLVSSISRDDVISSGKIQ 548
AYR ++ K V L+++H QE+ K +GTPLV+ I+++ +S I
Sbjct: 563 VAYRFKQMHKGPGKVKLEILHGEQEKSSDRGP-----KCFGTPLVTYINKEP-LSGTDIA 616
Query: 549 STVQRMLSPFLKKESLMHADSFDPSSMVTTVDPSGEAHSNSSSNIAKEDASSSKAVTLPN 608
+++ +LSP + +H S +V + + +G SS +I D +
Sbjct: 617 TSISGLLSPLRR----VHM-----SCVVNSGNENGHVPDESSRSILSRDTETEDNDR--E 665
Query: 609 LPLQLVDESNVCFDLS-VEGDKTIRIPSSSTSIVVYVDWSQKLLEKYNTHFLENLLEVFK 667
L L L+ + F+L +E D + P S T ++ V W++K EKY++ +L +L +V K
Sbjct: 666 LSLSLLRDY-YSFNLQPLESDSVVN-PGSVTKVL--VKWNEKEHEKYDSSYLNDLPKVHK 721
Query: 668 NGPVTKKARTEPLSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVI 727
N + KK E +SL++CLEAFL EEPL P+DMWYCP CKE RQA+KKLDLW+LP++LV
Sbjct: 722 N-VLAKKTMQEGISLFSCLEAFLAEEPLGPDDMWYCPGCKEHRQANKKLDLWKLPDILVF 780
Query: 728 HLKRFSYSRSMKHKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHY 787
HLKRF+YSR K+K++T VNF IHD +L+KYV N++ + LYELYA++NHYGG+G GHY
Sbjct: 781 HLKRFTYSRYFKNKIDTLVNFHIHDLDLSKYVKNED-GQSYLYELYAISNHYGGLGGGHY 839
Query: 788 TAHIKLLDENRWYNFDDSHISPINEDDVKSAAAYVLFYRR 827
TA+ KL+DE +WYNFDDS +S +NE ++K++AAYVLFY+R
Sbjct: 840 TAYAKLMDETKWYNFDDSRVSAVNESEIKTSAAYVLFYQR 879
>sp|Q9C585|UBP8_ARATH Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana
GN=UBP8 PE=1 SV=2
Length = 871
Score = 593 bits (1528), Expect = e-168, Method: Compositional matrix adjust.
Identities = 348/878 (39%), Positives = 493/878 (56%), Gaps = 93/878 (10%)
Query: 1 WWQHWIDYVNQDQPNNTGDGSSLLEHFNSAGSSAS---KRPSGIDNSDLVNDATAE-DPG 56
WW+ D + P+ + + +L + S GSS K + I NSD++ D E D
Sbjct: 33 WWKDAQDSM----PSESVEKREIL-YTASCGSSYGGPMKLINNIFNSDILFDLRREGDAL 87
Query: 57 AGPEIVDTLLEGRDYILLPQEVWNQLHSWYGGGPTLARKVISSGLSQTELAVEVYPLRLQ 116
E + + GRD+ L+ ++W Q WY + V S + +VYP++L+
Sbjct: 88 QNGETGEASVSGRDFALVSSDMWLQALKWYHDDKNTEKGVKSFSAGGVDRG-DVYPVQLR 146
Query: 117 LLVMPRGECSTIRISKKETIGELHRRACSIFYLNLEQICIWDYYGHRKHALMNDMDRTLD 176
L V+ ++I KK+ E RRAC IF L+ EQ+ IWD G +D+ +
Sbjct: 147 LSVLQETNSLAVKICKKDNSVECFRRACKIFSLDSEQLRIWDISGQTTLFFESDVSNS-K 205
Query: 177 DANIQMDQDILVEVLDNVNGTNCKSSIQDNGFAEKKASSVLVEPSKSSLSIAGGWSASKG 236
D Q DQ+IL+E+ + G + ++++ KK + + + + GG G
Sbjct: 206 DCQQQADQEILLEL--QIYGLSDSIKLKES----KKEDGSTQQTNGITNGMNGGTVFRFG 259
Query: 237 TSRNHSSEISTSPNLASARDSDNTLGSSGVTTRGASVGLTGLLNLGNTCFMNSAIQCLVH 296
S N+L G ++GLTGL NLGNTCFMNS++QCL H
Sbjct: 260 RS--------------------NSLSFLGKAGEAGTLGLTGLQNLGNTCFMNSSLQCLAH 299
Query: 297 TPEFARYFREDYRREINWQNPLGMV----------------------------------- 321
TP+ +F +Y +EIN NPLGM
Sbjct: 300 TPKLVDFFLGEYSKEINLDNPLGMKGEIALAFGDLLRSLWAPGASTVAPRTFKAKLARFA 359
Query: 322 ------------ELLAFLLDGLHEDLNRVKHKPYIKSKDADGRPDEEVADEYWANHIARN 369
ELLAFLLDGLHEDLNRVK+KPY+++KD DGRPD EVADEYW NH+ARN
Sbjct: 360 PQFSGFNQHDSQELLAFLLDGLHEDLNRVKNKPYVEAKDGDGRPDAEVADEYWRNHVARN 419
Query: 370 DSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQATTTRTMTVTVFTSDGSALPS 429
DSIIVDVCQGQYKSTLVCP+C KVSV FDPFMYLSLPL T+ RTM +TV ++DGS+LP
Sbjct: 420 DSIIVDVCQGQYKSTLVCPICKKVSVMFDPFMYLSLPLPCTSMRTMDLTVMSADGSSLPI 479
Query: 430 TYTVTVPKHGRCRDLIQVLGNICSLKQSEELKVAEIQNHSIQRFLDDPLISLSTIKDDDH 489
TV VPK G+ DL + L CSL + E L V E+ N+ I RFL++P SL+ I+D D
Sbjct: 480 PLTVNVPKFGKFEDLHKALVTACSLPEEETLLVTEVYNNRIIRFLEEPTDSLTLIRDGDK 539
Query: 490 LAAYRVPKLVKKAVFLQLIHRLQEQEPGAAQTTSQWKAYGTPLVSSISRDDVISSGKIQS 549
L YR+ K + + +H+ E++ + +++ WKA+G PLVS + DV + +++
Sbjct: 540 LVVYRLKKDANNSPLIVYMHQKLEEQFISGKSSPTWKAFGIPLVSRLC--DVENGSDVEN 597
Query: 550 TVQRMLSPFLKKESLMHADSFDPSSMVTTVDPSGEAHSNSSSNIAKEDASSSKAVTLPNL 609
++LS F + +P+ T + ++ + + +++++ P L
Sbjct: 598 LYLKLLSSFKMPTEFFTENLENPTEEEATDKTDTDGTTSVEDTNSTDVKETTESLPDPVL 657
Query: 610 PLQLVDESNVCFDLSVEGDKTIRIPSSSTSIVVYVDWSQKLLEKYNTHFLENLLEVFKNG 669
L L D+ + + +K + + S + V W K L+ Y+T L +L EV K+G
Sbjct: 658 RLYLTDDRGNSIEAEMLKEKPV---NKSKRLNVLARWPVKELDVYDTCLLSSLPEVSKSG 714
Query: 670 PVTKKARTEPLSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHL 729
TK+ + E +SL+ CLEAFL EEPL P+DMWYCP CKE RQA KKLDLWRLPE+LVIHL
Sbjct: 715 --TKRPQ-ESVSLFKCLEAFLTEEPLGPDDMWYCPGCKEHRQAIKKLDLWRLPEILVIHL 771
Query: 730 KRFSYSRSMKHKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTA 789
KRFSYSR MK+KLE +V+FP+ + +L+ Y++ KN Y LYA++NHYG MG GHYTA
Sbjct: 772 KRFSYSRFMKNKLEAYVDFPLDNLDLSSYISYKNGQTTYRYMLYAISNHYGSMGGGHYTA 831
Query: 790 HIKLLDENRWYNFDDSHISPINEDDVKSAAAYVLFYRR 827
++ +RWY+FDDSH+ I+++ +K++AAYVLFY+R
Sbjct: 832 YVH-HGGDRWYDFDDSHVHQISQEKIKTSAAYVLFYKR 868
>sp|B2GUZ1|UBP4_RAT Ubiquitin carboxyl-terminal hydrolase 4 OS=Rattus norvegicus
GN=Usp4 PE=1 SV=1
Length = 961
Score = 421 bits (1083), Expect = e-117, Method: Compositional matrix adjust.
Identities = 306/933 (32%), Positives = 453/933 (48%), Gaps = 159/933 (17%)
Query: 1 WWQHWIDYVNQDQPNNTGDGSSLLEHFNSAGSSASKRPSGIDNSDLVNDATAEDPGAGPE 60
W++ W YV D + D ++ EH + P IDNS L +D ++
Sbjct: 41 WFKQWKKYVGFD----SWDMYNVGEH--------NLFPGPIDNSGLFSDPESQT------ 82
Query: 61 IVDTLLEGRDYILLPQEVWNQLHSWYG---GGPTLARKVISSGLSQTELAVEVYPLRLQL 117
+ + L++ DY+L+P E WN+L +WYG G + RKV+ GL VEVY L L+L
Sbjct: 83 LKEHLIDELDYVLVPTEAWNKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKL 142
Query: 118 LVM--PRGECSTIRISKKETIGELHRRACSIFYLNLE-QICIWDYYGHRKHALMNDMDRT 174
P S SK +TI + + +F + E + +W+ Y + ++ +D T
Sbjct: 143 CENSDPTNVLS-CHFSKADTIATIEKEMRKLFNIPAERETRLWNKYMSNTYEQLSKLDNT 201
Query: 175 LDDANIQMDQDILVEVLDNVNGTNCKSSIQDNGFAEKKASSVLVEPSKSSLSIAGGWSAS 234
+ DA + Q +++E N +GT + ++Q SKSS + + ++ S
Sbjct: 202 IQDAGLYQGQVLVIEP-QNEDGTWPRQTLQ----------------SKSSTAPSRNFTTS 244
Query: 235 KGTSRNHSSEISTSPNLASARDSDNTLG--SSGVTTRGASV----------------GLT 276
S + S +S S L + DS N+ G +SGV+ GA GL
Sbjct: 245 SKPSASPYSSMSAS--LIANGDSTNSSGMHNSGVSRGGAGFSASYNCQEPPSPHIQPGLC 302
Query: 277 GLLNLGNTCFMNSAIQCLVHTPEFARYF-REDYRREINWQNPLGMV-------------- 321
GL NLGNTCFMNSA+QCL +T YF +++Y EIN NPLGM
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTGPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 362
Query: 322 ---------------------------------ELLAFLLDGLHEDLNRVKHKPYIKSKD 348
ELLAF+LDGLHEDLNRVK KPY++ KD
Sbjct: 363 WSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPYLEPKD 422
Query: 349 ADGRPDEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQ 408
A+GRPD VA E W NH RNDS+IVD G +KSTLVCP C KVSVTFDPF YL+LPL
Sbjct: 423 ANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLP 482
Query: 409 ATTTRTMTVTVFTSDGSALPSTYTVTVPKHGRCRDLIQVLGNICSLKQSEELKVAEIQNH 468
R M V + +D P Y VTVP G DL + L + + +E + V ++ NH
Sbjct: 483 LKKDRIMEVFLVPADPHCRPIQYRVTVPLMGAISDLCEALSKLSGIA-AENMVVTDVYNH 541
Query: 469 SIQR-FLDDPLISLSTIKDDDHLAAYRVPKL-VKKAVFLQLIHRLQEQEPGAAQTTSQWK 526
+ F D +S T +DD + Y + + + ++ L +E++ + T+S
Sbjct: 542 RFHKIFQMDEGLSHITPRDD--IFVYEICTTPMDGSEYITLPVYFREKKSRPSSTSSGAV 599
Query: 527 AYGTPLVSSISRDDVISSGKIQSTVQRMLSPFLKK------------------------- 561
YG PL+ S+ + + Q+ +R +S ++K+
Sbjct: 600 LYGQPLLVSVPKHRLTLESLYQAVCER-ISRYIKQPLPEEFLSSPLEPGACNGSRGSYEG 658
Query: 562 --ESLMHADSFDPSSMVTTVDPSGEAHSNSSSNIAKEDASSSKAVTLPN----LPLQLVD 615
E + H + + ++ V+ SGE S ++ KA P LV+
Sbjct: 659 DEEEMDHQE--EGKEQLSEVEESGE-----DSQGGDPTETTQKAKGPPRHKRLFTFSLVN 711
Query: 616 ESNVCFDLSVEGD-KTIRIPSSSTSIVVYVDWSQKLLEKYNTHFLENLLEVFKNGPVTKK 674
S+ D K +++ S ST + +DW + Y E + +K
Sbjct: 712 SCGTADINSLATDGKLLKLNSRST---LAIDWDSETRSLYFDEQESEACEKHTSMSQPQK 768
Query: 675 ARTEPLSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSY 734
+ ++L C+E F E L D WYCP CK+ +QA+KK DLW LP++LV+HLKRFSY
Sbjct: 769 KKKAAIALRECIELFTTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPKILVVHLKRFSY 828
Query: 735 SRSMKHKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTAHIKLL 794
+R + KL+T V FP+ N++++V ++ ++R +Y+L A++NHYG MG GHYTA+ K
Sbjct: 829 NRYWRDKLDTVVEFPVRALNMSEFVCDR-AARPYVYDLIAVSNHYGAMGVGHYTAYAKNR 887
Query: 795 DENRWYNFDDSHISPINEDDVKSAAAYVLFYRR 827
+WY FDDS +S +ED + + AAYVLFY+R
Sbjct: 888 LNGKWYYFDDSSVSLASEDQIVTKAAYVLFYQR 920
>sp|P35123|UBP4_MOUSE Ubiquitin carboxyl-terminal hydrolase 4 OS=Mus musculus GN=Usp4
PE=1 SV=3
Length = 962
Score = 411 bits (1056), Expect = e-113, Method: Compositional matrix adjust.
Identities = 301/918 (32%), Positives = 442/918 (48%), Gaps = 128/918 (13%)
Query: 1 WWQHWIDYVNQDQPNNTGDGSSLLEHFNSAGSSASKRPSGIDNSDLVNDATAEDPGAGPE 60
W++ W YV D + D ++ EH + P IDNS L +D ++
Sbjct: 41 WFKQWKKYVGFD----SWDMYNVGEH--------NLFPGPIDNSGLFSDPESQ------T 82
Query: 61 IVDTLLEGRDYILLPQEVWNQLHSWYG---GGPTLARKVISSGLSQTELAVEVYPLRLQL 117
+ + L++ DY+L+P E WN+L +WYG G + RKV+ GL VEVY L L+L
Sbjct: 83 LKEHLIDELDYVLVPAEAWNKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKL 142
Query: 118 LVM--PRGECSTIRISKKETIGELHRRACSIFYLNLE-QICIWDYYGHRKHALMNDMDRT 174
P S SK +TI + + +F + E + +W+ Y + ++ +D T
Sbjct: 143 CENSDPTNVLS-CHFSKADTIATIEKEMRKLFNIPAERETRLWNKYMSNTYEQLSKLDNT 201
Query: 175 LDDANIQMDQDILVEVLDNVNGTNCKSSIQD-NGFAEKKASSVLVEPSKSSLSIAGGWSA 233
+ DA + Q +++E N +GT + S+Q + A + + +PS S
Sbjct: 202 IQDAGLYQGQVLVIEP-QNEDGTWPRQSLQSKSSTAPSRNFTTSSKPSASPYCSVSASLI 260
Query: 234 SKGTSRNHSSEISTSPNLASARDSDNTLGSSGVTTRGASVGLTGLLNLGNTCFMNSAIQC 293
+ G S N SS + +S + + GL GL NLGNTCFMNSA+QC
Sbjct: 261 ANGDSTN-SSGMHSSGVSRGGSGFSASYNCQEPPSPHIQPGLCGLGNLGNTCFMNSALQC 319
Query: 294 LVHTPEFARYF-REDYRREINWQNPLGMV------------------------------- 321
L +T YF +++Y EIN NPLGM
Sbjct: 320 LSNTAPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDTHVAPRMFKTQV 379
Query: 322 ----------------ELLAFLLDGLHEDLNRVKHKPYIKSKDADGRPDEEVADEYWANH 365
ELLAF+LDGLHEDLNRVK KPY++ KDA+GRPD VA E W NH
Sbjct: 380 GRFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPYLEPKDANGRPDAVVAKEAWENH 439
Query: 366 IARNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQATTTRTMTVTVFTSDGS 425
RNDS+IVD G +KSTLVCP C KVSVTFDPF YL+LPL R M V + +D
Sbjct: 440 RLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRIMEVFLVPADPQ 499
Query: 426 ALPSTYTVTVPKHGRCRDLIQVLGNICSLKQSEELKVAEIQNHSIQR-FLDDPLISLSTI 484
P Y VTVP G DL + L + + +E + V ++ NH + F D +S T
Sbjct: 500 CRPIQYRVTVPLMGAISDLCEALSKLSGIA-AENMVVTDVYNHRFHKIFQMDEGLSHITP 558
Query: 485 KDDDHLAAYRVPKLV---KKAVFLQLIHRLQEQEPGAAQTTSQWKAYGTPLVSSISRDDV 541
+DD + Y V + + L + R ++ P +A +S YG PL+ S+ + +
Sbjct: 559 RDD--IFVYEVCNTSMDGSECITLPVYFREKKSRPSSA--SSGAVLYGQPLLVSVPKHKL 614
Query: 542 ISSGKIQSTVQRMLSPFLKK--ESLMHADSFDPSS------------------------M 575
Q+ R +S ++K+ + +P +
Sbjct: 615 TLESLYQAVCDR-ISRYIKQPLPDEFLSSPLEPGACNGSRSSYEGDEEEEMDHQEEGKEQ 673
Query: 576 VTTVDPSGE-----AHSNSSSNIAKEDASSSKAVTLPNLPLQLVDESNVCFDLSVEGD-K 629
++ V+ SGE HS S+ + K + T LV+ S+ D K
Sbjct: 674 LSEVEGSGEDDQGDDHSESAQKV-KGQPRHKRLFT-----FSLVNSCGTADINSLATDGK 727
Query: 630 TIRIPSSSTSIVVYVDWSQKLLEKYNTHFLENLLEVFKNGPVTKKARTEPLSLYTCLEAF 689
+++ S ST + +DW + Y E + +K + ++L C+E F
Sbjct: 728 LLKLNSRST---LAIDWDSETRSLYFDEQESEACEKHLSMSQPQKKKKAAVALRECIELF 784
Query: 690 LREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFP 749
E L D WYCP CK+ +QA+KK DLW LP++LV+HLKRFSY+R + KL+T V FP
Sbjct: 785 TTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFP 844
Query: 750 IHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTAHIKLLDENRWYNFDDSHISP 809
+ N++++V ++ S+R +Y+L A++NHYG MG GHYTA+ K +WY FDDS +S
Sbjct: 845 VRALNMSEFVCDR-SARPYVYDLIAVSNHYGAMGVGHYTAYAKNRLNGKWYYFDDSSVSL 903
Query: 810 INEDDVKSAAAYVLFYRR 827
+ED + + AAYVLFY+R
Sbjct: 904 ASEDQIVTKAAYVLFYQR 921
>sp|F6Z5C0|UBP15_XENTR Ubiquitin carboxyl-terminal hydrolase 15 OS=Xenopus tropicalis
GN=usp15 PE=2 SV=2
Length = 982
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 315/940 (33%), Positives = 446/940 (47%), Gaps = 157/940 (16%)
Query: 1 WWQHWIDYVNQDQPNNTGDGSSLLEHFNSAGSSASKRPSGIDNSDLVNDATAEDPGAGPE 60
W++ W YV D + G + P IDNS L+ D +
Sbjct: 37 WFKQWKKYVGFDSWDKYQMGDQ------------NVYPGPIDNSGLLKDTDTQ------S 78
Query: 61 IVDTLLEGRDYILLPQEVWNQLHSWYG---GGPTLARKVISSGLSQTELAVEVYPLRLQL 117
+ + L++ DYILLP E WN+L SWY +ARKV+ G+ VEVY L+L
Sbjct: 79 LKEHLIDELDYILLPTEGWNKLVSWYSVVESQQPIARKVVEQGMFVKHCKVEVYLTELKL 138
Query: 118 LVMPR-GECSTIRISKKETIGELHRRACSIFYLNLE-QICIWDYYGHRKHALMNDMDRTL 175
T R SK +TI + + +IF + E + +W+ Y +N + T+
Sbjct: 139 CENGNMNNVVTRRFSKADTIDMIEKEMRTIFSIPDEKETRLWNKYMSNTFEPLNKPESTI 198
Query: 176 DDANIQMDQDILVEVLDNVNGTNCKSSIQDNGFAEKKASSVLVEPSKSSLSIAGGWSASK 235
DA + Q +++E N G + S+ K+S + P+ S+L S S
Sbjct: 199 QDAGLYQGQMLVIEQ-KNQEGQWPRGSM-------PKSSGI---PNFSTLPKISPSSLSN 247
Query: 236 GTSRNHSSEISTSPNLASARDSDNTLGSSGVTTRGASVGLTGLLNLGNTCFMNSAIQCLV 295
+ +S + S + + S GL GL NLGNTCFMNSAIQCL
Sbjct: 248 NYNNFNSRIMKNSNYCLPSYAAYKNYEYSEPGRHNEQPGLCGLSNLGNTCFMNSAIQCLS 307
Query: 296 HTPEFARYFRED-YRREINWQNPLGM---------------------------------- 320
+TP YF D Y+ E+N NPLGM
Sbjct: 308 NTPPLTEYFLNDKYQDELNMDNPLGMRGEIAKSYAELIKQMWSGKYSYVTPRAFKTQVGR 367
Query: 321 -------------VELLAFLLDGLHEDLNRVKHKPYIKSKDADGRPDEEVADEYWANHIA 367
ELLAFLLDGLHEDLNR++ KPYI+ KDADGRPD+ VA+E W NHI
Sbjct: 368 FAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHIK 427
Query: 368 RNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQATTTRTMTVTVFTSDGSAL 427
RNDSIIVD+ G +KSTLVCP C+K+SVTFDPF YL+LPL R + V + D A
Sbjct: 428 RNDSIIVDIFHGLFKSTLVCPECSKISVTFDPFCYLTLPLPMKKERALEVYLVRMDPLAK 487
Query: 428 PSTYTVTVPKHGRCRDLIQVLGNICSLKQSEELKVAEIQNHSIQRF--LDDPLISLSTIK 485
P Y V VPK G DL L ++ + E++ V +I NH R +D+ +LS+I
Sbjct: 488 PMQYKVIVPKIGNIMDLCTALSSLSGIA-PEKMVVTDIYNHRFHRIFAMDE---NLSSIM 543
Query: 486 DDDHLAAYRVPKLVKKAVFLQLIHRLQEQEPGAAQTTSQWKA---YGTPLVSSISRDDVI 542
+ D + + + + Q+I + +E + S +G P + ++ R+ I
Sbjct: 544 ERDDIYVFET-SINRTEDTEQVIIPVYLREKFRHTSYSHHHGSTLFGQPFLITVPRN--I 600
Query: 543 SSGKIQSTVQRMLSPFLK---------------KESLMHADSFD-------PSSMVTTVD 580
+ K+ + + + ++K KE ++ + + PS M T +
Sbjct: 601 TEDKLYNLLLLRMCRYVKATNDTEENDGSLHCNKEHTVNGNGPNGIHEEGSPSEMETD-E 659
Query: 581 PSGEAHSNSSSNIAKEDASSSKAVTLPNLPLQLVDESNVCFDLSVEGDK----TIRIPSS 636
P E+ + E++ S +V N + + C SV G K T + +
Sbjct: 660 PDDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEDTCKGQSVTGQKKRLFTFQFSNL 719
Query: 637 STSIVVYV------------------------DWSQKLLEKYNTHFLENLLEVFKNGPVT 672
+S + Y+ DW KL +K+ F EN E F+
Sbjct: 720 GSSDITYIKDDTKYIRFDERQLRLDERSYLALDWDPKLKKKF---FDENAAEDFEKHESV 776
Query: 673 -----KKARTEPLSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVI 727
KKA + L C+E F +E L ED WYCP CKE +QA+KKLDLW LP VLV+
Sbjct: 777 DFTPQKKAF---MKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVV 833
Query: 728 HLKRFSYSRSMKHKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHY 787
HLKRFSYSR M+ KL+T V+FPI D +++ ++ N N+ Y L A++NHYGGMG GHY
Sbjct: 834 HLKRFSYSRYMRDKLDTLVDFPISDLDMSTFLINPNAG-PCCYNLIAVSNHYGGMGGGHY 892
Query: 788 TAHIKLLDENRWYNFDDSHISPINEDDVKSAAAYVLFYRR 827
TA K D+ +WY FDDS +S +E+ + S AAYVLFY+R
Sbjct: 893 TAFAKNKDDGKWYYFDDSSVSTASEEQIVSKAAYVLFYQR 932
>sp|Q8R5H1|UBP15_MOUSE Ubiquitin carboxyl-terminal hydrolase 15 OS=Mus musculus GN=Usp15
PE=2 SV=1
Length = 981
Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust.
Identities = 314/944 (33%), Positives = 439/944 (46%), Gaps = 165/944 (17%)
Query: 1 WWQHWIDYVNQDQPNNTGDGSSLLEHFNSAGSSASKRPSGIDNSDLVNDATAEDPGAGPE 60
W++ W YV D + G + P IDNS L+ D A+
Sbjct: 37 WFKQWKKYVGFDSWDKYQMGDQ------------NVYPGPIDNSGLLKDGDAQ------S 78
Query: 61 IVDTLLEGRDYILLPQEVWNQLHSWYG---GGPTLARKVISSGLSQTELAVEVYPLRLQL 117
+ + L++ DYILLP E WN+L SWY G +ARKV+ G+ VEVY L+L
Sbjct: 79 LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKL 138
Query: 118 LVMPR-GECSTIRISKKETIGELHRRACSIFYLNLEQIC-IWDYYGHRKHALMNDMDRTL 175
T R SK +TI + + IF + E+ +W+ Y +N D T+
Sbjct: 139 CENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKEARLWNKYMSNTFEPLNKPDSTI 198
Query: 176 DDANIQMDQDILVEVLDNVNGTNCKSSIQDNGFAEKKASSVLVEPSKSSLSIAGGWSASK 235
DA + Q +++E N +GT + S P S+ S S S
Sbjct: 199 QDAGLYQGQVLVIEQ-KNEDGT------------WPRGPSTPKSPGASNFSTLPKISPSS 245
Query: 236 GTSRNHSSEISTS-------PNLASARDSDNTLGSSGVTTRGASVGLTGLLNLGNTCFMN 288
++ ++ P+ + ++ D S GL GL NLGNTCFMN
Sbjct: 246 LSNNYNNINNRNVKNSNYCLPSYTAYKNYD----YSEPGRNNEQPGLCGLSNLGNTCFMN 301
Query: 289 SAIQCLVHTPEFARYFRED-YRREINWQNPLGM--------------------------- 320
SAIQCL +TP YF D Y+ E+N+ NPLGM
Sbjct: 302 SAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRA 361
Query: 321 --------------------VELLAFLLDGLHEDLNRVKHKPYIKSKDADGRPDEEVADE 360
ELLAFLLDGLHEDLNR++ KPYI+ KDADGRPD+ VA+E
Sbjct: 362 FKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEE 421
Query: 361 YWANHIARNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQATTTRTMTVTVF 420
W NH+ RNDSIIVD+ G +KSTLVCP C K+SVTFDPF YL+LPL R++ V +
Sbjct: 422 AWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERSLEVYLV 481
Query: 421 TSDGSALPSTYTVTVPKHGRCRDLIQVLGNICSLKQSEELKVAEIQNHSIQRFL--DDPL 478
D A P Y V VPK G DL L + + ++++ V +I NH R D+
Sbjct: 482 RMDPLAKPMQYKVIVPKIGNILDLCTALSALSGVP-ADKMIVTDIYNHRFHRIFAVDE-- 538
Query: 479 ISLSTIKDDDHLAAYRVPKLVKKA-----VFLQLIHRLQEQEPGAAQTTSQWKAYGTPLV 533
+LS+I + D + + + + +A V + + R + + T +G P +
Sbjct: 539 -NLSSIMERDDIYVFEIN--INRAEDTEHVVIPVCLREKFRHSSYTHHTGS-SLFGQPFL 594
Query: 534 SSISRDDVISSGKIQSTVQRMLSPFLK--------------------------------K 561
+I R++ + K+ + + + ++K
Sbjct: 595 MAIPRNN--TEDKLYNLLLLRMCRYVKMSTETEETDGHLRCCEDQNINGNGPNGLHEEGS 652
Query: 562 ESLMHADSFDPSSMVTTVDPSGEAHSNSSSNIAKEDASSSKAVTLPNLPLQLVDESNVCF 621
S M D D S PS +S S ++ ++ S + T QL F
Sbjct: 653 PSEMETDEPDDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEETCKGQLTGHKKRLF 712
Query: 622 DLSVE--GDKTIRIPSSSTSIVVY--------------VDWSQKLLEKYNTHFLENLLEV 665
G+ I TS + + +DW L ++Y F EN E
Sbjct: 713 TFQFNNLGNNDINYIKDDTSHIRFDDRQLRLDERSFLALDWDPDLKKRY---FDENAAED 769
Query: 666 F-KNGPVTKKARTEPL-SLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPE 723
F K+ V K P L C+E F +E L ED WYCP CKE +QA+KKLDLW LP
Sbjct: 770 FEKHESVEYKPPKRPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPP 829
Query: 724 VLVIHLKRFSYSRSMKHKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMG 783
VLV+HLKRFSYSR M+ KL+T V+FPI D ++++++ N N+ + Y L A++NHYGGMG
Sbjct: 830 VLVVHLKRFSYSRYMRDKLDTLVDFPISDLDMSEFLINPNAGPCR-YNLIAVSNHYGGMG 888
Query: 784 SGHYTAHIKLLDENRWYNFDDSHISPINEDDVKSAAAYVLFYRR 827
GHYTA K D+ +WY FDDS +S +ED + S AAYVLFY+R
Sbjct: 889 GGHYTAFAKNKDDGKWYYFDDSSVSTASEDQIVSKAAYVLFYQR 932
>sp|Q9Y4E8|UBP15_HUMAN Ubiquitin carboxyl-terminal hydrolase 15 OS=Homo sapiens GN=USP15
PE=1 SV=3
Length = 981
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 311/942 (33%), Positives = 437/942 (46%), Gaps = 161/942 (17%)
Query: 1 WWQHWIDYVNQDQPNNTGDGSSLLEHFNSAGSSASKRPSGIDNSDLVNDATAEDPGAGPE 60
W++ W YV D + G + P IDNS L+ D A+
Sbjct: 37 WFKQWKKYVGFDSWDKYQMGDQ------------NVYPGPIDNSGLLKDGDAQ------S 78
Query: 61 IVDTLLEGRDYILLPQEVWNQLHSWYG---GGPTLARKVISSGLSQTELAVEVYPLRLQL 117
+ + L++ DYILLP E WN+L SWY G +ARKV+ G+ VEVY L+L
Sbjct: 79 LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKL 138
Query: 118 LVMPR-GECSTIRISKKETIGELHRRACSIFYLNLE-QICIWDYYGHRKHALMNDMDRTL 175
T R SK +TI + + IF + E + +W+ Y +N D T+
Sbjct: 139 CENGNMNNVVTRRFSKADTIDTIEKEIRKIFSIPDEKETRLWNKYMSNTFEPLNKPDSTI 198
Query: 176 DDANIQMDQDILVEVLDNVNGTNCKSSIQDNGFAEKKASSVLVEPSKSSLSIAGGWSASK 235
DA + Q +++E N +GT + S P S+ S S S
Sbjct: 199 QDAGLYQGQVLVIEQ-KNEDGT------------WPRGPSTPKSPGASNFSTLPKISPSS 245
Query: 236 GTSRNHSSEISTS-------PNLASARDSDNTLGSSGVTTRGASVGLTGLLNLGNTCFMN 288
++ ++ P+ + ++ D S GL GL NLGNTCFMN
Sbjct: 246 LSNNYNNMNNRNVKNSNYCLPSYTAYKNYD----YSEPGRNNEQPGLCGLSNLGNTCFMN 301
Query: 289 SAIQCLVHTPEFARYFRED-YRREINWQNPLGM--------------------------- 320
SAIQCL +TP YF D Y+ E+N+ NPLGM
Sbjct: 302 SAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRA 361
Query: 321 --------------------VELLAFLLDGLHEDLNRVKHKPYIKSKDADGRPDEEVADE 360
ELLAFLLDGLHEDLNR++ KPYI+ KDADGRPD+ VA+E
Sbjct: 362 FKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEE 421
Query: 361 YWANHIARNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQATTTRTMTVTVF 420
W NH+ RNDSIIVD+ G +KSTLVCP C K+SVTFDPF YL+LPL RT+ V +
Sbjct: 422 AWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLV 481
Query: 421 TSDGSALPSTYTVTVPKHGRCRDLIQVLGNICSLKQSEELKVAEIQNHSIQR-FLDDPLI 479
D P Y V VPK G DL L + + ++++ V +I NH R F D +
Sbjct: 482 RMDPLTKPMQYKVVVPKIGNILDLCTALSALSGIP-ADKMIVTDIYNHRFHRIFAMDENL 540
Query: 480 SLSTIKDDDHLAAYRVPKLVK-KAVFLQLIHRLQEQEPGAAQTTSQWKAYGTPLVSSISR 538
S +DD ++ + + + V + + R + + T +G P + ++ R
Sbjct: 541 SSIMERDDIYVFEININRTEDTEHVIIPVCLREKFRHSSYTHHTGS-SLFGQPFLMAVPR 599
Query: 539 DDVISSGKIQSTVQRMLSPFLK--------------------------------KESLMH 566
++ + K+ + + + ++K S M
Sbjct: 600 NN--TEDKLYNLLLLRMCRYVKISTETEETEGSLHCCKDQNINGNGPNGIHEEGSPSEME 657
Query: 567 ADSFDPSSMVTTVDPSGEAHSNSSSNIAKEDASSSKAVTLPNLPLQLVDESNVCFDLSVE 626
D D S PS +S S ++ ++ S + T QL F
Sbjct: 658 TDEPDDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEDTCKGQLTGHKKRLFTFQFN 717
Query: 627 G-------------------DKTIRIPSSSTSIVVYVDWSQKLLEKYNTHFLENLLEVF- 666
D+ +R+ S + +DW L ++Y F EN E F
Sbjct: 718 NLGNTDINYIKDDTRHIRFDDRQLRLDERS---FLALDWDPDLKKRY---FDENAAEDFE 771
Query: 667 KNGPVTKKARTEPL-SLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVL 725
K+ V K +P L C+E F +E L ED WYCP CKE +QA+KKLDLW LP VL
Sbjct: 772 KHESVEYKPPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVL 831
Query: 726 VIHLKRFSYSRSMKHKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSG 785
V+HLKRFSYSR M+ KL+T V+FPI+D ++++++ N N+ + Y L A++NHYGGMG G
Sbjct: 832 VVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCR-YNLIAVSNHYGGMGGG 890
Query: 786 HYTAHIKLLDENRWYNFDDSHISPINEDDVKSAAAYVLFYRR 827
HYTA K D+ +WY FDDS +S +ED + S AAYVLFY+R
Sbjct: 891 HYTAFAKNKDDGKWYYFDDSSVSTASEDQIVSKAAYVLFYQR 932
>sp|Q9R085|UBP15_RAT Ubiquitin carboxyl-terminal hydrolase 15 OS=Rattus norvegicus
GN=Usp15 PE=1 SV=1
Length = 952
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 307/933 (32%), Positives = 428/933 (45%), Gaps = 172/933 (18%)
Query: 1 WWQHWIDYVNQDQPNNTGDGSSLLEHFNSAGSSASKRPSGIDNSDLVNDATAEDPGAGPE 60
W++ W YV D + G + P IDNS L+ D A+
Sbjct: 37 WFKQWKKYVGFDSWDKYQMGDQ------------NVYPGPIDNSGLLKDGDAQ------S 78
Query: 61 IVDTLLEGRDYILLPQEVWNQLHSWYG---GGPTLARKVISSGLSQTELAVEVYPLRLQL 117
+ + L++ DYILLP E WN+L SWY G +ARKV+ G+ VEVY L+L
Sbjct: 79 LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKL 138
Query: 118 LVMPR-GECSTIRISKKETIGELHRRACSIFYLNLEQIC-IWDYYGHRKHALMNDMDRTL 175
T R SK +TI + + IF + E+ +W+ Y +N D T+
Sbjct: 139 CENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKEARLWNKYMSNTFEPLNKPDSTI 198
Query: 176 DDANIQMDQDILVEVLDNVNGTNCKSSIQDNGFAEKKASSVLVEPSKSSLSIAGGWSASK 235
DA + Q +++E ++G + S+ V+ S L ++A K
Sbjct: 199 QDAGLYQGQVLVIE------------QKNEDGTWPRGPSAPNVKNSNYCLP---SYTAYK 243
Query: 236 GTSRNHSSEISTSPNLASARDSDNTLGSSGVTTRGASVGLTGLLNLGNTCFMNSAIQCLV 295
+ + P GL GL NLGNTCFMNSAIQCL
Sbjct: 244 NYDYSEPGRNNEQP------------------------GLCGLSNLGNTCFMNSAIQCLS 279
Query: 296 HTPEFARYFRED-YRREINWQNPLGM---------------------------------- 320
+TP YF D Y+ E+N+ NPLGM
Sbjct: 280 NTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGR 339
Query: 321 -------------VELLAFLLDGLHEDLNRVKHKPYIKSKDADGRPDEEVADEYWANHIA 367
ELLAFLLDGLHEDLNR++ KPYI+ KDADGRPD+ VA+E W NH+
Sbjct: 340 FAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLK 399
Query: 368 RNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQATTTRTMTVTVFTSDGSAL 427
RNDSIIVD+ G +KSTLVCP C K+SVTFDPF YL+LPL R++ V + D A
Sbjct: 400 RNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAK 459
Query: 428 PSTYTVTVPKHGRCRDLIQVLGNICSLKQSEELKVAEIQNHSIQR-FLDDPLISLSTIKD 486
P Y V VPK G DL L + + ++++ V +I NH R F D +S +D
Sbjct: 460 PMQYKVIVPKIGNILDLCTALSALSGVP-ADKMIVTDIYNHRFHRIFAMDENLSSIMERD 518
Query: 487 DDHLAAYRVPKLVK-KAVFLQLIHRLQEQEPGAAQTTSQWKAYGTPLVSSISRDD----- 540
D ++ + + + V + + R + + T +G P + ++ R++
Sbjct: 519 DIYVFEININRTEDTEHVVIPVCLREKFRHSSYTHHTGS-SLFGQPFLMAVPRNNTEDKL 577
Query: 541 -------VISSGKIQSTVQRMLSPFLKKE------------------SLMHADSFDPSSM 575
+ K+ + + P E S M D D S
Sbjct: 578 YNLLLLRMCRYVKMSTETEETDGPLRCCEDQNINGNGPNGIHEEGSPSEMETDEPDDESS 637
Query: 576 VTTVDPSGEAHSNSSSNIAKEDASSSKAVTLPNLPLQLVDESNVCFDLSVEG-------- 627
PS +S S ++ ++ S + T +L F
Sbjct: 638 QDQELPSENENSQSEDSVGGDNDSENGLCTEETCKGRLTGHKKRLFTFQFNNLGNTDINY 697
Query: 628 -----------DKTIRIPSSSTSIVVYVDWSQKLLEKYNTHFLENLLEVF-KNGPVTKKA 675
D+ +R+ S + +DW L ++Y F EN E F K+ V K
Sbjct: 698 IKDDTRHIRFDDRQLRLDERS---FLALDWDPDLKKRY---FDENAAEDFEKHESVEYKP 751
Query: 676 RTEPL-SLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSY 734
P L C+E F +E L ED WYCP CKE +QA+KKLDLW LP VLV+HLKRFSY
Sbjct: 752 PKRPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSY 811
Query: 735 SRSMKHKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTAHIKLL 794
SR M+ KL+T V+FPI D ++++++ N N+ + Y L A++NHYGGMG GHYTA K
Sbjct: 812 SRYMRDKLDTLVDFPISDLDMSEFLINPNAGPCR-YNLIAVSNHYGGMGGGHYTAFAKNK 870
Query: 795 DENRWYNFDDSHISPINEDDVKSAAAYVLFYRR 827
D+ +WY FDDS +S +ED + S AAYVLFY+R
Sbjct: 871 DDGKWYYFDDSSVSSASEDQIVSKAAYVLFYQR 903
>sp|Q2HJE4|UBP15_BOVIN Ubiquitin carboxyl-terminal hydrolase 15 OS=Bos taurus GN=USP15
PE=2 SV=1
Length = 952
Score = 405 bits (1040), Expect = e-112, Method: Compositional matrix adjust.
Identities = 307/935 (32%), Positives = 431/935 (46%), Gaps = 176/935 (18%)
Query: 1 WWQHWIDYVNQDQPNNTGDGSSLLEHFNSAGSSASKRPSGIDNSDLVNDATAEDPGAGPE 60
W++ W YV D + G + P IDNS L+ D A+
Sbjct: 37 WFKQWKKYVGFDSWDKYQMGDQ------------NVYPGPIDNSGLLRDGDAQ------S 78
Query: 61 IVDTLLEGRDYILLPQEVWNQLHSWYG---GGPTLARKVISSGLSQTELAVEVYPLRLQL 117
+ + L++ DYILLP E WN+L SWY G +ARKV+ G+ VEVY L+L
Sbjct: 79 LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKL 138
Query: 118 LVMPR-GECSTIRISKKETIGELHRRACSIFYLNLE-QICIWDYYGHRKHALMNDMDRTL 175
T R SK +TI + + IF + E + +W+ Y +N D T+
Sbjct: 139 CENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKYMSNTFEPLNKPDSTI 198
Query: 176 DDANIQMDQDILVEVLDNVNGTNCKSSIQDNGFAEKKASSVLVEPSKSSLSIAGGWSASK 235
DA + Q +++E ++G + S+ V+ S L ++A K
Sbjct: 199 QDAGLYQGQVLVIE------------QKNEDGTWPRGPSTPNVKNSNYCLP---SYTAYK 243
Query: 236 GTSRNHSSEISTSPNLASARDSDNTLGSSGVTTRGASVGLTGLLNLGNTCFMNSAIQCLV 295
+ + P GL GL NLGNTCFMNSA QCL
Sbjct: 244 NYDYSEPGRNNEQP------------------------GLCGLSNLGNTCFMNSAFQCLS 279
Query: 296 HTPEFARYFRED-YRREINWQNPLGM---------------------------------- 320
+TP YF D Y+ E+N+ NPLGM
Sbjct: 280 NTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKYSYVTPRAFKTQVGR 339
Query: 321 -------------VELLAFLLDGLHEDLNRVKHKPYIKSKDADGRPDEEVADEYWANHIA 367
ELLAFLLDGLHEDLNR++ KPYI+ KDADGRPD+ VA+E W NH+
Sbjct: 340 FAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLK 399
Query: 368 RNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQATTTRTMTVTVFTSDGSAL 427
RNDSIIVD+ G +KSTLVCP C K+SVTFDPF YL+LPL RT+ V + D
Sbjct: 400 RNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLTK 459
Query: 428 PSTYTVTVPKHGRCRDLIQVLGNICSLKQSEELKVAEIQNHSIQR-FLDDPLISLSTIKD 486
P Y V VPK G DL L ++ S ++++ V +I NH R F D +S +D
Sbjct: 460 PMQYKVVVPKIGNILDLCTAL-SLLSGVPADKMIVTDIYNHRFHRIFAMDENLSSIMERD 518
Query: 487 DDHLAAYRVPKLVK-KAVFLQLIHRLQEQEPGAAQTTSQWKAYGTPLVSSISRDDVISSG 545
D ++ + + + V + + R + + T +G P + ++ R++ +
Sbjct: 519 DIYVFEININRTEDTEHVIIPVCLREKFRHSSYTHHTGS-SLFGQPFLMAVPRNN--TED 575
Query: 546 KIQSTVQRMLSPFLK--------------------------------KESLMHADSFDPS 573
K+ + + + ++K S M D D
Sbjct: 576 KLYNLLLVRMCRYVKISTDTEDTEGSLHCCKDQNINGNGPNGIHEEGSPSEMETDEPDDE 635
Query: 574 SMVTTVDPSGEAHSNSSSNIAKEDASSSKAVTLPNLPLQLVDESNVCFDLSVEG------ 627
S PS +S S ++ ++ S + T QL F
Sbjct: 636 SSQDQELPSENENSQSEDSVGGDNDSENGLCTEETCRGQLTGHKKRLFTFQFNNLGNTDI 695
Query: 628 -------------DKTIRIPSSSTSIVVYVDWSQKLLEKYNTHFLENLLEVF-KNGPVTK 673
D+ +R+ S + +DW L ++Y F EN E F K+ V
Sbjct: 696 NYIKDDTRHIRFDDRQLRLDERS---FLALDWDPDLKKRY---FDENAAEDFEKHESVEY 749
Query: 674 KARTEPL-SLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRF 732
K +P L C+E F +E L ED WYCP CKE +QA+KKLDLW LP VLV+HLKRF
Sbjct: 750 KPPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRF 809
Query: 733 SYSRSMKHKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTAHIK 792
SYSR M+ KL+T V+FPI+D ++++++ N N+ + Y L A++NHYGGMG GHYTA K
Sbjct: 810 SYSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCR-YNLIAVSNHYGGMGGGHYTAFAK 868
Query: 793 LLDENRWYNFDDSHISPINEDDVKSAAAYVLFYRR 827
D+ +WY FDDS +S +ED + S AAYVLFY+R
Sbjct: 869 NKDDGKWYYFDDSSVSTASEDQIVSKAAYVLFYQR 903
>sp|Q13107|UBP4_HUMAN Ubiquitin carboxyl-terminal hydrolase 4 OS=Homo sapiens GN=USP4
PE=1 SV=3
Length = 963
Score = 403 bits (1036), Expect = e-111, Method: Compositional matrix adjust.
Identities = 307/921 (33%), Positives = 443/921 (48%), Gaps = 133/921 (14%)
Query: 1 WWQHWIDYVNQDQPNNTGDGSSLLEHFNSAGSSASKRPSGIDNSDLVNDATAEDPGAGPE 60
W++ W YV D + D ++ EH + P IDNS L +D ++
Sbjct: 41 WFKQWKKYVGFD----SWDMYNVGEH--------NLFPGPIDNSGLFSDPESQ------T 82
Query: 61 IVDTLLEGRDYILLPQEVWNQLHSWYG---GGPTLARKVISSGLSQTELAVEVYPLRLQL 117
+ + L++ DY+L+P E WN+L +WYG G + RKV+ GL VEVY L L+L
Sbjct: 83 LKEHLIDELDYVLVPTEAWNKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKL 142
Query: 118 LVM--PRGECSTIRISKKETIGELHRRACSIFYLNLE-QICIWDYYGHRKHALMNDMDRT 174
P S SK +TI + + +F + E + +W+ Y + ++ +D T
Sbjct: 143 CENSDPTNVLS-CHFSKADTIATIEKEMRKLFNIPAERETRLWNKYMSNTYEQLSKLDNT 201
Query: 175 LDDANIQMDQDILVEVLDNVNGTNCKSSIQDN-------GFAEKKASSVLVEPSKSSLSI 227
+ DA + Q +++E N +GT + ++Q F SS S S+ I
Sbjct: 202 VQDAGLYQGQVLVIEP-QNEDGTWPRQTLQSKSSTAPSRNFTTSPKSSASPYSSVSASLI 260
Query: 228 AGGWSASKGTSRNHSSEISTSPNLASARDSDNTLGSSGVTTRGASVGLTGLLNLGNTCFM 287
A G S S T HSS +S + SA + SS + GL GL NLGNTCFM
Sbjct: 261 ANGDSTS--TCGMHSSGVSRGGSGFSASYNCQEPPSSHIQP-----GLCGLGNLGNTCFM 313
Query: 288 NSAIQCLVHTPEFARYF-REDYRREINWQNPLGMV------------------------- 321
NSA+QCL +T YF +++Y EIN NPLGM
Sbjct: 314 NSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPR 373
Query: 322 ----------------------ELLAFLLDGLHEDLNRVKHKPYIKSKDADGRPDEEVAD 359
ELLAFLLDGLHEDLNRVK KPY++ KDA+GRPD VA
Sbjct: 374 MFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAK 433
Query: 360 EYWANHIARNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQATTTRTMTVTV 419
E W NH RNDS+IVD G +KSTLVCP C KVSVTFDPF YL+LPL R M V +
Sbjct: 434 EAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEVFL 493
Query: 420 FTSDGSALPSTYTVTVPKHGRCRDLIQVLGNICSLKQSEELKVAEIQNHSIQRF--LDDP 477
+D P+ Y VTVP G DL + L + + +E + VA++ NH + +D+
Sbjct: 494 VPADPHCRPTQYRVTVPLMGAVSDLCEALSRLSGIA-AENMVVADVYNHRFHKIFQMDE- 551
Query: 478 LISLSTIKDDDHLAAYRVPKL-VKKAVFLQLIHRLQEQEPGAAQTTSQWKAYGTPLVSSI 536
L+ I D + Y V V + + L +E++ + T+S YG PL+ S+
Sbjct: 552 --GLNHIMPRDDIFVYEVCSTSVDGSECVTLPVYFRERKSRPSSTSSASALYGQPLLLSV 609
Query: 537 SRDDVISSGKIQSTVQRMLSPFLKKESLMHADSFDPSSM--------------------- 575
+ + Q+ R +S ++K+ D F S +
Sbjct: 610 PKHKLTLESLYQAVCDR-ISRYVKQPL---PDEFGSSPLEPGACNGSRNSCEGEDEEEME 665
Query: 576 --------VTTVDPSGEAHSNSSSNIAKEDASSSKAVTLPNLPLQLVDESNVCFDLSVEG 627
++ + SGE + + + + LV+ S+
Sbjct: 666 HQEEGKEQLSETEGSGEDEPGNDPSETTQKKIKGQPCPKRLFTFSLVNSYGTADINSLAA 725
Query: 628 D-KTIRIPSSSTSIVVYVDWSQKLLEKYNTHFLENLLEVFKNGPVTKKARTEPLSLYTCL 686
D K +++ S ST + +DW + Y E + +K + ++L C+
Sbjct: 726 DGKLLKLNSRST---LAMDWDSETRRLYYDEQESEAYEKHVSMLQPQKKKKTTVALRDCI 782
Query: 687 EAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFV 746
E F E L D WYCP CK+ +QA+KK DLW LP++LV+HLKRFSY+R + KL+T V
Sbjct: 783 ELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVV 842
Query: 747 NFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTAHIKLLDENRWYNFDDSH 806
FPI N++++V N S+R +Y+L A++NHYG MG GHYTA+ K +WY FDDS+
Sbjct: 843 EFPIRGLNMSEFVCNL-SARPYVYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSN 901
Query: 807 ISPINEDDVKSAAAYVLFYRR 827
+S +ED + + AAYVLFY+R
Sbjct: 902 VSLASEDQIVTKAAYVLFYQR 922
>sp|A6QR55|UBP4_BOVIN Ubiquitin carboxyl-terminal hydrolase 4 OS=Bos taurus GN=USP4 PE=2
SV=1
Length = 963
Score = 401 bits (1031), Expect = e-110, Method: Compositional matrix adjust.
Identities = 296/920 (32%), Positives = 435/920 (47%), Gaps = 131/920 (14%)
Query: 1 WWQHWIDYVNQDQPNNTGDGSSLLEHFNSAGSSASKRPSGIDNSDLVNDATAEDPGAGPE 60
W++ W YV D + D ++ EH + P IDNS L +D ++
Sbjct: 41 WFKQWKKYVGFD----SWDMYNVGEH--------NLYPGPIDNSGLFSDPESQ------T 82
Query: 61 IVDTLLEGRDYILLPQEVWNQLHSWYG---GGPTLARKVISSGLSQTELAVEVYPLRLQL 117
+ + L++ DY+L+P E WN+L +WYG G + RKV+ GL VEVY L L+L
Sbjct: 83 LKEHLIDELDYVLVPAEAWNKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKL 142
Query: 118 LVM--PRGECSTIRISKKETIGELHRRACSIFYLNLE-QICIWDYYGHRKHALMNDMDRT 174
P S SK +TI + + +F + E + +W+ Y + ++ +D T
Sbjct: 143 CENSDPTNVLS-CHFSKADTIATIEKEMRKLFNIPAERETRLWNKYMSNTYEQLSKLDNT 201
Query: 175 LDDANIQMDQDILVEVLDNVNGTNCKSSIQDN-------GFAEKKASSVLVEPSKSSLSI 227
+ DA + Q +++E N +GT + + Q F SS S S+ I
Sbjct: 202 VQDAGLYQGQVLVIEP-QNEDGTWPRQTQQSKSSTAPSRNFTTSPKSSASPYSSVSASPI 260
Query: 228 AGGWSASKGTSRNHSSEISTSPNLASARDSDNTLGSSGVTTRGASVGLTGLLNLGNTCFM 287
A G S + + S AS ++ L GL GL NLGNTCFM
Sbjct: 261 ANGDSTNTSGMHSSGVSRGGSGFSASYNCQESPLTH-------VQPGLCGLGNLGNTCFM 313
Query: 288 NSAIQCLVHTPEFARYF-REDYRREINWQNPLGMV------------------------- 321
NSA+QCL +T YF +++Y EIN NPLGM
Sbjct: 314 NSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPR 373
Query: 322 ----------------------ELLAFLLDGLHEDLNRVKHKPYIKSKDADGRPDEEVAD 359
ELLAFLLDGLHEDLNRVK KPY++ KDA+GRPD VA
Sbjct: 374 MFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAK 433
Query: 360 EYWANHIARNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQATTTRTMTVTV 419
E W NH RNDS+IVD G +KSTLVCP C KVSVTFDPF YL+LPL R M + +
Sbjct: 434 EAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEIFL 493
Query: 420 FTSDGSALPSTYTVTVPKHGRCRDLIQVLGNICSLKQSEELKVAEIQNHSIQRF--LDDP 477
+D P+ Y V VP G DL + L + + +E + V ++ NH + +D+
Sbjct: 494 VPADPRCRPTQYRVVVPLMGAVSDLCEALSKLSGIA-AENMVVTDVYNHRFHKIFQMDE- 551
Query: 478 LISLSTIKDDDHLAAYRVPKLV---KKAVFLQLIHRLQEQEPGAAQTTSQWKAYGTPLVS 534
L+ I D + Y V + V L + R ++ P + T + YG PL+
Sbjct: 552 --GLNHIMPRDDIFVYEVCSTSPDGSECVTLPVYFRERKSRPSSTSTGA--VLYGQPLLV 607
Query: 535 SISRDDVISSGKIQSTVQRMLSPFLKK-------ESLMHADSFDPS-------------- 573
S+ + + Q+ +R +S ++K+ S + + + S
Sbjct: 608 SVPKHKLTLESLYQAVCER-ISRYIKQPLPDESGSSPLELGACNGSRSGCAGEDEEEMEH 666
Query: 574 -----SMVTTVDPSGEAHSNSSSNIAKEDASSSKAVTLPNLPLQLVDESNVCFDLSVEGD 628
++ + SG+ S A + + + LV+ S+ D
Sbjct: 667 QEEGREQLSETEGSGDDEPGSDHGEATQKKNKGRPCPRRLFTFSLVNSYGTADINSLATD 726
Query: 629 -KTIRIPSSSTSIVVYVDWSQKLLEKYNTHFLENLLEVFKNGPVTKKARTEPLSLYTCLE 687
K +++ S ST + +DW + Y E + +K + ++L C+E
Sbjct: 727 GKLLKLNSRST---LAIDWDSETRSCYYNEQESETYEKHVSMLQPQKKKKTAVALRDCIE 783
Query: 688 AFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVN 747
F E L D WYCP CK+ +QA+KK DLW LP++LV+HLKRFSY+R + KL+T V
Sbjct: 784 LFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVE 843
Query: 748 FPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTAHIKLLDENRWYNFDDSHI 807
FP+ N++++V + S+R +Y+L A++NHYG MG GHYTA+ K +WY FDDS++
Sbjct: 844 FPVRGLNMSEFVCDP-SARPYVYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNV 902
Query: 808 SPINEDDVKSAAAYVLFYRR 827
S ED + + AAYVLFY+R
Sbjct: 903 SLACEDQIVTKAAYVLFYQR 922
>sp|Q5RCD3|UBP4_PONAB Ubiquitin carboxyl-terminal hydrolase 4 OS=Pongo abelii GN=USP4
PE=2 SV=1
Length = 963
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 311/927 (33%), Positives = 449/927 (48%), Gaps = 145/927 (15%)
Query: 1 WWQHWIDYVNQDQPNNTGDGSSLLEHFNSAGSSASKRPSGIDNSDLVNDATAEDPGAGPE 60
W++ W YV + D ++ EH + P IDNS L +D ++
Sbjct: 41 WFKQWKKYVG----FGSWDMYNVGEH--------NLFPGPIDNSGLFSDPESQ------T 82
Query: 61 IVDTLLEGRDYILLPQEVWNQLHSWYG---GGPTLARKVISSGLSQTELAVEVYPLRLQL 117
+ + L++ DY+L+P E WN+L +WYG G + RKV+ GL VEVY L L+L
Sbjct: 83 LKEHLIDELDYVLVPTEAWNKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKL 142
Query: 118 LVM--PRGECSTIRISKKETIGELHRRACSIFYLNLEQIC-IWDYYGHRKHALMNDMDRT 174
P S SK +TI + + +F + E+ +W+ Y + ++ +D T
Sbjct: 143 CENSDPTNVLS-CHFSKADTIATIEKEMRKLFNIPAEREARLWNKYMSNTYEQLSKLDNT 201
Query: 175 LDDANIQMDQDILVEVLDNVNGTNCKSSIQD--------NGFAEKKASSVLVEPSKSSLS 226
+ DA + + Q +++E N +GT + ++Q N K+S+ SL
Sbjct: 202 VQDAGLYLGQVLVIEP-QNEDGTWPRQTLQSKSSTAPSRNFTTSPKSSASPYSSVSDSL- 259
Query: 227 IAGGWSASKGTSRNHSSEISTSPNLASARDSDNTLGSSGVTTRGASVGLTGLLNLGNTCF 286
IA G S S T HSS +S + SA + SS + GL GL NLGNTCF
Sbjct: 260 IANGDSTS--TCGMHSSGVSRGGSGFSASYNCQEPPSSHIQP-----GLCGLGNLGNTCF 312
Query: 287 MNSAIQCLVHTPEFARYF-REDYRREINWQNPLGMV------------------------ 321
MNSA+QCL +T YF +++Y EIN NPLGM
Sbjct: 313 MNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAP 372
Query: 322 -----------------------ELLAFLLDGLHEDLNRVKHKPYIKSKDADGRPDEEVA 358
ELLAFLLDGLHEDLNRVK KPY++ KDA+GRPD VA
Sbjct: 373 RMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDVVVA 432
Query: 359 DEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQATTTRTMTVT 418
E W NH RNDS+IVD G +KSTLVCP C KVSVTFDPF YL+LPL R M V
Sbjct: 433 KEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEVF 492
Query: 419 VFTSDGSALPSTYTVTVPKHGRCRDLIQVLGNICSLKQSEELKVAEIQNHSIQRF--LDD 476
+ +D P+ Y VTVP G DL + L + + +E + VA++ NH + +D+
Sbjct: 493 LVPADPHCRPTQYRVTVPLMGAVSDLCEALSRLSGIA-AENMVVADVYNHRFHKIFQMDE 551
Query: 477 PLISLSTIKDDDHLAAYRVPKL-VKKAVFLQLIHRLQEQEPGAAQTTSQWKAYGTPLVSS 535
L+ I D + Y V V + + L +E++ + T+S YG PL+ S
Sbjct: 552 ---GLNHIMPRDDIFVYEVCSTSVDGSECVTLPVYFRERKSRPSSTSSASALYGQPLLLS 608
Query: 536 ISRDDVISSGKIQSTVQRMLSPFLKKESLMHADSFDPSSM-------------------- 575
+ + + Q+ R +S ++K+ D F S +
Sbjct: 609 VPKHKLTLESLYQAVCDR-ISRYVKQPL---PDEFGSSPLEPGACNGSRNSCEGEDEEEM 664
Query: 576 ---------VTTVDPSGEAHSNSSSNIAKEDASSSKAVTLPNLPLQLVDESNVCFDLSVE 626
++ + SGE S + + + LV+ S+
Sbjct: 665 EHQEEGKEQLSETEGSGEDEPGSDPSETTQKKIKGQPCPKRLFTFSLVNSYGTADINSLA 724
Query: 627 GD-KTIRIPSSSTSIVVYVDWSQKLLEKYNTHFLENLLEVFKN-----GPVTKKARTEPL 680
D K +++ S ST + +DW E + ++ E E ++ P KK T +
Sbjct: 725 ADGKLLKLNSRST---LAMDWDS---ETRSLYYDEQESEAYEKHVSMLQPQKKKKTT--V 776
Query: 681 SLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKH 740
+L C+E F E L D WYCP CK+ +QA+KK DLW LP++LV+HLKRFSY+R +
Sbjct: 777 ALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKSDLWSLPKILVVHLKRFSYNRYWRD 836
Query: 741 KLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTAHIKLLDENRWY 800
KL+T V FPI N++++V N S+R +Y+L A++NHYG MG GHYTA+ K +WY
Sbjct: 837 KLDTVVEFPIRGLNMSEFVCNL-SARPYVYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWY 895
Query: 801 NFDDSHISPINEDDVKSAAAYVLFYRR 827
FDDS++S +ED + + AAYVLFY+R
Sbjct: 896 YFDDSNVSLASEDQIVTKAAYVLFYQR 922
>sp|P51784|UBP11_HUMAN Ubiquitin carboxyl-terminal hydrolase 11 OS=Homo sapiens GN=USP11
PE=1 SV=3
Length = 963
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 295/918 (32%), Positives = 412/918 (44%), Gaps = 188/918 (20%)
Query: 1 WWQHWIDYVNQDQPNNTGDGSSLLEHFNSAGSSASKRPSGIDNSDLVNDATAEDPGAGPE 60
W++ W YV GD S S P I+N+ L D
Sbjct: 109 WYKQWEAYVQ------GGDQDS------------STFPGCINNATLFQDEINW------R 144
Query: 61 IVDTLLEGRDYILLPQEVWNQLHSWYG---GGPTLARKVISSGLSQTELAVEVYPLRLQL 117
+ + L+EG DY+LLP W+ L SWYG G P + RKVI Q VEVYP+ L L
Sbjct: 145 LKEGLVEGEDYVLLPAAAWHYLVSWYGLEHGQPPIERKVIELPNIQ---KVEVYPVEL-L 200
Query: 118 LVMPR--GECSTIRISKKETIGELHRRACSIFYLN-LEQICIWDYYGHRKHALMNDMDRT 174
LV G+ T++ S ++IG + R A F + E +W + D T
Sbjct: 201 LVRHNDLGKSHTVQFSHTDSIGLVLRTARERFLVEPQEDTRLWAKNSEGSLDRLYDTHIT 260
Query: 175 LDDANIQMDQDILVEVLDNVNGTNCKSSIQDNGFAEKKASSVLVEPSKSSLSIAGGWSAS 234
+ DA ++ Q I++E KK G W
Sbjct: 261 VLDAALETGQLIIME-------------------TRKKD---------------GTWP-- 284
Query: 235 KGTSRNHSSEISTSPNLASARDSDNTLGSSGVTTRGASVGLTGLLNLGNTCFMNSAIQCL 294
S+++ N S D D G+ GL NLGNTCFMNSA+QCL
Sbjct: 285 -------SAQLHVMNNNMSEEDEDFK----------GQPGICGLTNLGNTCFMNSALQCL 327
Query: 295 VHTPEFARYFRED-YRREINWQNPLGMV-------------------------------- 321
+ P+ YF + Y E+N++NPLGM
Sbjct: 328 SNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQAWSGHHRSIVPHVFKNKVG 387
Query: 322 ---------------ELLAFLLDGLHEDLNRVKHKPYIKSKDADGRPDEEVADEYWANHI 366
ELL+FLLDGLHEDLNRVK K Y++ DA GRPD+EVA E W NH
Sbjct: 388 HFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCDAAGRPDQEVAQEAWQNHK 447
Query: 367 ARNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQATTTRTMTVTVFTSDGSA 426
RNDS+IVD G +KSTLVCP C VSVTFDPF YLS+PL + R + V D
Sbjct: 448 RRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPLPISHKRVLEVFFIPMDPRR 507
Query: 427 LPSTYTVTVPKHGRCRDLIQVLGNICSLKQSEELKVAEIQNHSIQRF--LDDPLISLSTI 484
P + + VPK G+ DL L + E + VA++ +H + L++PL S+I
Sbjct: 508 KPEQHRLVVPKKGKISDLCVALSKHTGIS-PERMMVADVFSHRFYKLYQLEEPL---SSI 563
Query: 485 KDDDHLAAYRVPKLV------KKAVFLQLIHRLQEQEPGAAQTTSQWKA--YGTPLVSSI 536
D D + Y V + ++ + + + L+E+ P S + +G PL+ S+
Sbjct: 564 LDRDDIFVYEVSGRIEAIEGSREDIVVPVY--LRERTPARDYNNSYYGLMLFGHPLLVSV 621
Query: 537 SRDDVISSGKIQSTVQRMLSPFLKKESLMHADSF-------------DPSSMVTTVDPSG 583
RD G + R+ K S D PS+ + DP
Sbjct: 622 PRDRFTWEGLYNVLMYRLSRYVTKPNSDDEDDGDEKEDDEEDKDDVPGPSTGGSLRDPEP 681
Query: 584 EAHSNSSSNIAKEDASSSKAVTLPNLP----------LQLVDESNVCFDLSVEGDKTIRI 633
E SS + + P LQ V+ + D+T
Sbjct: 682 EQAGPSSGVTNRCPFLLDNCLGTSQWPPRRRRKQLFTLQTVNSNGT-------SDRTTSP 734
Query: 634 PSSSTSIVVYVDWSQKLLEKYNTHF-LENLLEVFKNGPVTKKARTEPLSLYTCLEAFLRE 692
+ +DW ++ ++Y E ++ G V KKA P+ L C+E F
Sbjct: 735 EEVHAQPYIAIDWEPEMKKRYYDEVEAEGYVKHDCVGYVMKKA---PVRLQECIELFTTV 791
Query: 693 EPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHD 752
E L E+ WYCP CK+ + A+KKLDLW LPE+L+IHLKRFSY++ + KL+T V FPI D
Sbjct: 792 ETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRD 851
Query: 753 FNLTKYVAN-KNSSRRQL--YELYALTNHYGGMGSGHYTAHIKLLDENRWYNFDDSHISP 809
+ +++V +N S +L Y+L A++NHYGGM GHYT D +W+ FDD+ +SP
Sbjct: 852 LDFSEFVIQPQNESNPELYKYDLIAVSNHYGGMRDGHYTTFACNKDSGQWHYFDDNSVSP 911
Query: 810 INEDDVKSAAAYVLFYRR 827
+NE+ ++S AAYVLFY+R
Sbjct: 912 VNENQIESKAAYVLFYQR 929
>sp|Q99K46|UBP11_MOUSE Ubiquitin carboxyl-terminal hydrolase 11 OS=Mus musculus GN=Usp11
PE=2 SV=4
Length = 921
Score = 356 bits (913), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 285/903 (31%), Positives = 410/903 (45%), Gaps = 180/903 (19%)
Query: 26 HFNSAGSSASKRPSGIDNSDLVNDATAEDPGAGPEIVDTLLEGRDYILLPQEVWNQLHSW 85
+ AS P I+N+ L D + + + LLEG DY+LLP WN + SW
Sbjct: 65 YVKGGDQDASTFPGCINNAGLFEDQISW------HLRERLLEGDDYVLLPAPAWNYMVSW 118
Query: 86 YG---GGPTLARKVIS-SGLSQTELAVEVYPLRLQLLVMPRGECS-TIRISKKETIGELH 140
YG G P + RKVI G+ + VEVYPL L L+ E + TI+ S +++ +
Sbjct: 119 YGLMDGQPPIERKVIELPGIRK----VEVYPLELLLVQHSDMETALTIQFSYTDSVELVL 174
Query: 141 RRACSIFYLN-LEQICIWDYYGHRKHALMNDMDRTLDDANIQMDQDILVEVLDNVNGTNC 199
+ A F + E +W + + TL DA ++ Q +++E N +GT
Sbjct: 175 QTAREQFLVEPQEDTRLWTKNSEGSLDRLCNTQITLLDACLETGQLVIMET-RNKDGT-- 231
Query: 200 KSSIQDNGFAEKKASSVLVEPSKSSLSIAGGWSASKGTSRNHSSEISTSPNLASARDSDN 259
W +++ N+ + + ++
Sbjct: 232 -------------------------------WPSAQLCGMNNIPD-----------EDED 249
Query: 260 TLGSSGVTTRGASVGLTGLLNLGNTCFMNSAIQCLVHTPEFARYFRED-YRREINWQNPL 318
G G+ GL NLGNTCFMNSA+QCL + P+ YF + Y E+N++NPL
Sbjct: 250 FQGQPGI---------CGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPL 300
Query: 319 GM-----------------------------------------------VELLAFLLDGL 331
GM ELL+FLLDGL
Sbjct: 301 GMKGELAEAYADLVKQTWSGYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGL 360
Query: 332 HEDLNRVKHKPYIKSKDADGRPDEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCN 391
HEDLNRVK K Y++ + GRPD EVA E W NH RNDS+IVD G +KSTLVCP C
Sbjct: 361 HEDLNRVKKKEYVELCNGAGRPDLEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCG 420
Query: 392 KVSVTFDPFMYLSLPLQATTTRTMTVTVFTSDGSALPSTYTVTVPKHGRCRDLIQVLGNI 451
VSVTFDPF YLS+PL + R + V D P + V VPK G DL L
Sbjct: 421 NVSVTFDPFCYLSVPLPVCSRRVLEVFFVPMDPRRKPEQHRVVVPKKGNISDLCVALSTH 480
Query: 452 CSLKQSEELKVAEIQNHSIQRF--LDDPLISLSTIKDDDHLAAYRVPKLVKKAVF----L 505
S+ +++ VA++ +H + L+DP LS I D D + Y V ++ +
Sbjct: 481 TSVA-PDKMIVADVFSHRFYKLYQLEDP---LSGILDRDDIFVYEVTGRIEPVEGSRDDI 536
Query: 506 QLIHRLQEQEPGAAQTTSQWK--AYGTPLVSSISRDDVISSGKIQSTVQRMLSPFLKKES 563
+ L+E+ P S + +G PL+ S+ RD G + R LS ++ K +
Sbjct: 537 VVPVYLRERTPSRDYNNSYYGLILFGHPLLVSVPRDRFSWEGLYNILMYR-LSRYVTKPT 595
Query: 564 -------------LMHADSFDPSSMVTTVDPSGEAHSNSSSNIAKEDASSSKAVT--LPN 608
D SS + S ++ + +E A +S VT P+
Sbjct: 596 SDEDDGDEKVDEDEDEDVEDDSSSEEEKEEMSAPTVNDGTREAEQEQAGTSSGVTERCPS 655
Query: 609 L--------------------PLQLVDESNVCFDLSVEGDKTIRIPSSSTSIVVYVDWSQ 648
L LQ V+ + D+T T + +DW
Sbjct: 656 LLDNSLRASQWPPRRRRKQLFTLQTVNSNGT-------SDRTTSPEEMQTQPYIAMDWEP 708
Query: 649 KLLEKYNTHFLENLLEVF-KNGPVTKKARTEPLSLYTCLEAFLREEPLVPEDMWYCPQCK 707
+ +Y + E E + K+ V + P+ L C++ F E L E+ WYC CK
Sbjct: 709 DMKRRY---YDEVEAEGYVKHDCVGYMLKKSPVQLKECIKLFTTVETLEKENPWYCSSCK 765
Query: 708 ERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHDFNLTKYVAN-KNSSR 766
+ + A+KKLDLW LPEVL+IHLKRFS+S+ + KL+T V FPI D + +++V KN S
Sbjct: 766 QHQLATKKLDLWMLPEVLIIHLKRFSFSKISREKLDTLVQFPIRDLDFSEFVIKPKNESS 825
Query: 767 RQL--YELYALTNHYGGMGSGHYTAHIKLLDENRWYNFDDSHISPINEDDVKSAAAYVLF 824
L Y+L A++NHYGGM GHYT D +W+ FDD+ +SP+NE+ ++S AAYVLF
Sbjct: 826 PDLYKYDLIAVSNHYGGMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLF 885
Query: 825 YRR 827
Y+R
Sbjct: 886 YQR 888
>sp|Q8BUM9|UBP43_MOUSE Ubiquitin carboxyl-terminal hydrolase 43 OS=Mus musculus GN=Usp43
PE=2 SV=2
Length = 1132
Score = 199 bits (507), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 177/684 (25%), Positives = 292/684 (42%), Gaps = 148/684 (21%)
Query: 248 SPNLASARDSDNTLGSSGVTTRGASV---GLTGLLNLGNTCFMNSAIQCLV--------- 295
+P A + D GS + G G GL N GNTCFMN+ +QCL
Sbjct: 70 APASAGSPGPDRPPGSQPQISSGDGARPPGAQGLKNHGNTCFMNAVVQCLSNTDLLAEFL 129
Query: 296 -----------------------------HTPEFARYFR---EDYRREINWQNPLGMVEL 323
+TP+ + F+ Y + + +E
Sbjct: 130 ALGRYRAAPGRAEVTEQLAALVRALWTREYTPQLSAEFKNAVSKYGSQFQGNSQHDALEF 189
Query: 324 LAFLLDGLHEDLNRVKH-------KPYIKSKDADGRPDEEVADEYWANHIARNDSIIVDV 376
L +LLD +HEDL H P + D RP A + S +
Sbjct: 190 LLWLLDRVHEDLEGSAHGLVSEQLPPEVSKISEDLRPS--------AAPTSLGPSFVQSH 241
Query: 377 CQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQATTTRTMTVT-VFTSD-------GSALP 428
Q QY+S+L CP C K S TFDPF+ +SLP+ TR ++VT VF S G A+P
Sbjct: 242 FQAQYRSSLTCPHCLKQSNTFDPFLCVSLPIPLRQTRFLSVTLVFPSKSQRFLRVGLAVP 301
Query: 429 STYTVTVPKHGRCRDLIQVLGNICSLKQSEELKVAEIQNHSIQR-FLDDPLISLSTIKDD 487
TV R ++ G + +EE+ + E+ + QR F D+ L+TI +
Sbjct: 302 ILSTVAA-----LRKMVAEEGGV----PAEEVILVELYPNGFQRSFFDE--EDLNTIAEG 350
Query: 488 DHLAAYRVPK------LVKKAVFLQLIHRLQEQEPGAAQTTSQWKAYGTPLVSS----IS 537
D++ A++VP L L + RL ++ + + PL S
Sbjct: 351 DNVYAFQVPPSPGLGTLSAHPSGLSVSPRLPVRDS---------QRFSGPLHSENRVVFL 401
Query: 538 RDDVISSGKIQSTVQRMLSPFLKKESLMHADSFDPSSMVTTVDPSGEAHSNSSSNIAKED 597
+++ SG+ S R PFL +E + + +++ V + + +
Sbjct: 402 FCNLVGSGQQAS---RFGPPFLIREDRTISWAQLQQCILSKV-----------RCLMRSE 447
Query: 598 ASSSKAVTLPNLPLQLVDESNVCFDLSVEGDKTI-----------RIPSSSTSIVVYVDW 646
S+ TL +++V S C LS + ++ + R P + + V+W
Sbjct: 448 VSAQDLGTL--FSIRVVGLSLACSYLSPKDNRPLCHWAVDRALHLRRPGGPPHVKLAVEW 505
Query: 647 SQKLLEKYNTHFLENLLEVFKNGPVTKKARTEP-LSLYTCLEAFLREEPLVPEDMWYCPQ 705
+ E+ E ++ + ++A +P +L C +++ +EE L +D W CP
Sbjct: 506 DSSVTERLFGSLQEERVQDADSVWRQQQAHQQPSCTLDECFQSYTKEEQLAQDDAWKCPH 565
Query: 706 CKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHDFNLTKYVANKNSS 765
C+ +Q KL LW LP++L+IHLKRF ++KL T V FP+ N+ +VA ++++
Sbjct: 566 CQVLQQGVVKLSLWTLPDILIIHLKRFCQVGERRNKLSTLVKFPLSGLNMAPHVARRSTN 625
Query: 766 RRQ----------------------LYELYALTNHYGGMGSGHYTAHIKLLDENRWYNFD 803
+ LY+LYA+ NH+G + GHYTA+ + + +WY++D
Sbjct: 626 SKAGPGPWSSWKQPICLPTTYPLDFLYDLYAVCNHHGSLQGGHYTAYCRNSLDGQWYSYD 685
Query: 804 DSHISPINEDDVKSAAAYVLFYRR 827
DS + + ED+V + AY+LFY++
Sbjct: 686 DSTVEALREDEVNTRGAYILFYQK 709
>sp|Q70EL4|UBP43_HUMAN Ubiquitin carboxyl-terminal hydrolase 43 OS=Homo sapiens GN=USP43
PE=1 SV=2
Length = 1123
Score = 193 bits (490), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 167/654 (25%), Positives = 271/654 (41%), Gaps = 143/654 (21%)
Query: 274 GLTGLLNLGNTCFMNSAIQCLV-------------------------------------- 295
G GL N GNTCFMN+ +QCL
Sbjct: 99 GAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYRAAPGRAEVTEQLAALVRALWTRE 158
Query: 296 HTPEFARYFR---EDYRREINWQNPLGMVELLAFLLDGLHEDLNRVKHKPYIKSKDADGR 352
+TP+ + F+ Y + + +E L +LLD +HEDL P + +
Sbjct: 159 YTPQLSAEFKNAVSKYGSQFQGNSQHDALEFLLWLLDRVHEDLEGSSRGPVSEKLPPEAT 218
Query: 353 PDEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQATTT 412
E A + S + Q QY+S+L CP C K S TFDPF+ +SLP+ T
Sbjct: 219 KTSENCLSPSA-QLPLGQSFVQSHFQAQYRSSLTCPHCLKQSNTFDPFLCVSLPIPLRQT 277
Query: 413 RTMTVT-VFTSD-------GSALPSTYTVTVPKHGRCRDLIQVLGNICSLKQSEELKVAE 464
R ++VT VF S G A+P TV R ++ G + ++E+ + E
Sbjct: 278 RFLSVTLVFPSKSQRFLRVGLAVPILSTVAA-----LRKMVAEEGGV----PADEVILVE 328
Query: 465 IQNHSIQR-FLDDPLISLSTIKDDDHLAAYRVPK------LVKKAVFLQLIHRLQEQEP- 516
+ QR F D+ L+TI + D++ A++VP L + L RL +E
Sbjct: 329 LYPSGFQRSFFDE--EDLNTIAEGDNVYAFQVPPSPSQGTLSAHPLGLSASPRLAAREGQ 386
Query: 517 --------------------GAAQTTSQWKAYGTPLVSSISRDDVISSGKIQSTVQRMLS 556
G+ Q S+ +G P + I D +S ++Q ++ +
Sbjct: 387 RFSLSLHSESKVLILFCNLVGSGQQASR---FGPPFL--IREDRAVSWAQLQQSILSKVR 441
Query: 557 PFLKKESLMHADSFDPSSMVTTVDPSGEAHSNSSSNIAKEDASSSKAVTLPNLPLQLVDE 616
+K E+ + N S + S A + L D
Sbjct: 442 HLMKSEAPVQ---------------------NLGSLFSIRVVGLSVACSY----LSPKDS 476
Query: 617 SNVCFDLSVEGDKTIRIPSSSTSIVVYVDWSQKLLEK-YNTHFLENLLEVFKNGPVTKKA 675
+C +V+ +R P + + V+W + E+ + + E + +
Sbjct: 477 RPLCH-WAVDRVLHLRRPGGPPHVKLAVEWDSSVKERLFGSLQEERAQDADSVWQQQQAH 535
Query: 676 RTEPLSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYS 735
+ +L C + + +EE L +D W CP C+ +Q KL LW LP++L+IHLKRF
Sbjct: 536 QQHSCTLDECFQFYTKEEQLAQDDAWKCPHCQVLQQGMVKLSLWTLPDILIIHLKRFCQV 595
Query: 736 RSMKHKLETFVNFPIHDFNLTKYVANKNSSRRQ----------------------LYELY 773
++KL T V FP+ N+ +VA +++S LY+LY
Sbjct: 596 GERRNKLSTLVKFPLSGLNMAPHVAQRSTSPEAGLGPWPSWKQPDCLPTSYPLDFLYDLY 655
Query: 774 ALTNHYGGMGSGHYTAHIKLLDENRWYNFDDSHISPINEDDVKSAAAYVLFYRR 827
A+ NH+G + GHYTA+ + + +WY++DDS + P+ ED+V + AY+LFY++
Sbjct: 656 AVCNHHGNLQGGHYTAYCRNSLDGQWYSYDDSTVEPLREDEVNTRGAYILFYQK 709
>sp|Q8NFA0|UBP32_HUMAN Ubiquitin carboxyl-terminal hydrolase 32 OS=Homo sapiens GN=USP32
PE=1 SV=1
Length = 1604
Score = 190 bits (482), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 163/561 (29%), Positives = 238/561 (42%), Gaps = 151/561 (26%)
Query: 18 GDGSSLLEHFNSAGSSASKRPSGIDNSDLVNDATAED-----PGAGPEIVDTLLEGRDYI 72
G ++L H N ++P IDN LV + G + L+ GRDY
Sbjct: 507 GANGNILLHLNP------QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLIHGRDYE 560
Query: 73 LLPQEVWNQLHSWYGGGPTLARKVISSGLSQTELA-VEVYP---LRLQLLVMPRGECSTI 128
++P+ VW L+ WYG L R VI + S+T++ +E++P L L+ R + S I
Sbjct: 561 MVPEPVWRALYHWYGANLALPRPVIKN--SKTDIPELELFPRYLLFLRQQPATRTQQSNI 618
Query: 129 RI----------------------SKKETIGELHRRACSIFYLNLEQICIWDYYGHRKHA 166
+ S+ +TI E+H + E + +W Y
Sbjct: 619 WVNMGNVPSPNAPLKRVLAYTGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLYNSENYLT 678
Query: 167 LMNDMDRTLDDANIQMDQDILVEVLDNVNGTNCKSSIQDNGFAEKKASSVLVEPSKSSLS 226
L++ D+D +E L IQD +++E +S
Sbjct: 679 LLD-------------DEDHKLEYL----------KIQDE-------QHLVIEVRNKDMS 708
Query: 227 IAGGWSASKGTSRNHSSEISTSPNLASARDSDNTLGSSGVTTRGASVGLTGLLNLGNTCF 286
S +S+ ++ T G TGL NLGNTCF
Sbjct: 709 WPEEMSFIANSSKIDRHKVPTEK------------------------GATGLSNLGNTCF 744
Query: 287 MNSAIQCLVHTPEFARYF---REDYRREINWQNPLGMV---------------------- 321
MNS+IQC+ +T +YF R Y E+N NP+GM
Sbjct: 745 MNSSIQCVSNTQPLTQYFISGRHLY--ELNRTNPIGMKGHMAKCYGDLVQELWSGTQKNV 802
Query: 322 -------------------------ELLAFLLDGLHEDLNRVKHKPYIKSKDADGRPDEE 356
ELLAFLLDGLHEDLNRV KPY++ KD+DGRPD E
Sbjct: 803 APLKLRWTIAKYAPRFNGFQQQDSQELLAFLLDGLHEDLNRVHEKPYVELKDSDGRPDWE 862
Query: 357 VADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQATTTRTMT 416
VA E W NH+ RN SI+VD+ GQ +S + C C +SV FDPF +LSLPL + +
Sbjct: 863 VAAEAWDNHLRRNRSIVVDLFHGQLRSQVKCKTCGHISVRFDPFNFLSLPLPMDSYMHLE 922
Query: 417 VTVFTSDGSALPSTYTVTVPKHGRCRDLIQVLGNICSLKQSEELKVAEIQNHSIQRF-LD 475
+TV DG+ P Y + + + L + L ++C L SE++ +AE+ +I+ F D
Sbjct: 923 ITVIKLDGTT-PVRYGLRLNMDEKYTGLKKQLSDLCGL-NSEQILLAEVHGSNIKNFPQD 980
Query: 476 DPLISLSTIKDDDHLAAYRVP 496
+ + LS L A+ +P
Sbjct: 981 NQKVRLSV---SGFLCAFEIP 998
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 74/125 (59%), Gaps = 2/125 (1%)
Query: 642 VYVDWSQKLLE-KYNTHFLENLLEVFKNGPVTKKARTEPLSLYTCLEAFLREEPLVPEDM 700
+ VDW L +Y T E +++ ++ +++A+ EP++L +CL AF EE L +M
Sbjct: 1195 IAVDWDPTALHLRYQTS-QERVVDEHESVEQSRRAQAEPINLDSCLRAFTSEEELGENEM 1253
Query: 701 WYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHDFNLTKYVA 760
+YC +CK A+KKLDLWRLP +L+IHLKRF + K + V FP F+ + ++
Sbjct: 1254 YYCSKCKTHCLATKKLDLWRLPPILIIHLKRFQFVNGRWIKSQKIVKFPRESFDPSAFLV 1313
Query: 761 NKNSS 765
++ +
Sbjct: 1314 PRDPA 1318
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 767 RQLYELYALTNHYGGMGSGHYTAHIKLLDEN-RWYNFDDSHISPINEDDVKSAAAYVLFY 825
+ +Y LYA++ H G +G GHY + K + N +WY ++DS ++ D++ + +AY+LFY
Sbjct: 1507 KPIYNLYAISCHSGILGGGHYVTYAK--NPNCKWYCYNDSSCKELHPDEIDTDSAYILFY 1564
Query: 826 RR 827
+
Sbjct: 1565 EQ 1566
>sp|O60079|UBP12_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 12
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp12 PE=1 SV=1
Length = 979
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 168/601 (27%), Positives = 251/601 (41%), Gaps = 105/601 (17%)
Query: 38 PSGIDNSDLVNDATAEDPGAGPEIVDTLLEGRDYILLPQEVWNQLHSWYG-GGPTLARKV 96
P +D D+ A E P+ L E D+ ++ ++VW+ L WYG GP R+
Sbjct: 99 PGPVDQEDI---ADLETGTLKPD----LQEEIDFTIISRDVWDLLVRWYGLKGPEFPRET 151
Query: 97 ISSGL-SQTELAVEVYPLRLQLLVMPRGECST--------IRISKKETIGELHRRACSIF 147
++ G S L VEVYP L ++ I +S K T+ +L
Sbjct: 152 VNLGSESHPHLVVEVYPPIFSLTLLSTNAVDANESHKPKKISLSSKSTLEDLLEGVKYTL 211
Query: 148 YLNLEQICIWDYYGHRKHALMNDMDRTLDDAN-IQMDQDILVEVLDNVNGTNCKSSIQDN 206
L +Q +W + + RT+D ++ I+++ E++D
Sbjct: 212 SLPSDQFRLW------RVDTDQPLHRTIDPSSFIKINSK---EIID-------------- 248
Query: 207 GFAEKKASSVLVEPSKSSLSIAGGWSASKGTSRNHSSEISTSPNLASARDSDNTLGSSGV 266
F EK S LVE L + S N + + + L N S+
Sbjct: 249 -FLEK--SKTLVE-----LGMDSSCSLVAECMINETWPVDRALRLQFLIQQRNNQSSNEE 300
Query: 267 TTRGASV-GLTGLLNLGNTCFMNSAIQCLVHTPEFARYFRED-YRREINWQNPLGM---- 320
+ V G GL NLGNTC+MNSA+QCL HT E +F D ++ ++N NPLGM
Sbjct: 301 QKQEKRVPGTCGLSNLGNTCYMNSALQCLTHTRELRDFFTSDEWKNQVNESNPLGMGGQV 360
Query: 321 -------------------------------------------VELLAFLLDGLHEDLNR 337
E LAFLLDGLHEDLNR
Sbjct: 361 ASIFASLIKSLYSPEHSSFAPRQFKATIGKFNHSFLGYGQQDSQEFLAFLLDGLHEDLNR 420
Query: 338 VKHKPYIKSKD---ADGRPDEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNKVS 394
+ KPY D D + A+E W H RNDS+IVD+ QG Y+STLVCPVCN VS
Sbjct: 421 IYQKPYTSKPDLYEVDEEKIKNTAEECWRLHKLRNDSLIVDLFQGMYRSTLVCPVCNTVS 480
Query: 395 VTFDPFMYLSLPLQATTTRTMTVTVFTSDGSALPSTYTVTVP-KHGRCRDLIQVLGNICS 453
+TFDPFM L+LPL + TVT +D + P V + K DL++ +
Sbjct: 481 ITFDPFMDLTLPLPVKQVWSHTVTFIPADTNLTPLAIEVVLESKAATIEDLVKYVAEKSG 540
Query: 454 LKQSEELKVAEIQNHSIQRFLDDPLIS-LSTIKDDDHLAAYRVPKLVKKAV--FLQLIHR 510
++ V E RFL S L I ++D + Y + + + L ++
Sbjct: 541 CSDYRKILVTETYKGRFYRFLTQLSKSLLMEISEEDEIYLYELERPYEDGSDDILVPVYH 600
Query: 511 LQEQEPGAAQTTSQWKAYGTPLVSSISRDDVISSGKIQSTVQRMLSPFLKKESLMHADSF 570
+ + +A + + +G P V +S ++V + I ++ F ++L + DS
Sbjct: 601 ISDDSTNSANSYMSSRDFGHPFVLQLSDNEVTDASFISEKLKLKYQQFTTLKNLKNIDSL 660
Query: 571 D 571
+
Sbjct: 661 E 661
Score = 147 bits (370), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/268 (36%), Positives = 149/268 (55%), Gaps = 21/268 (7%)
Query: 571 DPSSMVTTVDPSGEAHSNSSSNIAKEDASSSKAVTLPNLPLQLVDESNVCFD------LS 624
D + +TVDP +AHS I +ED S K V + P N L
Sbjct: 719 DKKDLESTVDPL-DAHS-----IEEEDDSEFKDVAPGSYPEPSKSNENTKLTAKENDRLL 772
Query: 625 VEGDKTI-RIPSSSTSIVVYVDWSQKLLEKYNTHFLENLLEVFKNGPVTKKARTEPLSLY 683
++GD + P S V V S + + + +LE+ + ++ +RT ++L
Sbjct: 773 IQGDLLVCEWPEKSYQFVFSVAPSSPQMGR--SLWLESKTILSDKKDDSEDSRT--ITLN 828
Query: 684 TCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLE 743
CL+ F + E L ED WYCP CKE RQASK++++WR PE+L+ HLKRFS R + K++
Sbjct: 829 DCLDEFEKTEQLGEEDPWYCPTCKEFRQASKQMEIWRCPEILIFHLKRFSSERRFRDKID 888
Query: 744 TFVNFPIHDFNLT----KYVANKNSSRRQLYELYALTNHYGGMGSGHYTAHIKLLDENRW 799
V FPI + +++ Y ++ + + +YELYA+ NHYGG+G GHYTA K D ++
Sbjct: 889 DLVEFPIDNLDMSMRTGSYKLSEKENPKLIYELYAVDNHYGGLGGGHYTAFAKNPDNGQF 948
Query: 800 YNFDDSHISPINEDDVKSAAAYVLFYRR 827
Y FDDS ++P+ ++ ++AAY+LFYRR
Sbjct: 949 YCFDDSRVTPVCPEETVTSAAYLLFYRR 976
>sp|Q6J1Y9|UBP19_RAT Ubiquitin carboxyl-terminal hydrolase 19 OS=Rattus norvegicus
GN=Usp19 PE=1 SV=1
Length = 1357
Score = 182 bits (463), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 155/292 (53%), Gaps = 57/292 (19%)
Query: 274 GLTGLLNLGNTCFMNSAIQCLVHTPEFARYFRE-DYRREINWQNPLG------------- 319
G TGL+NLGNTCFMNS IQ L +T E +F + + EIN+ NPLG
Sbjct: 534 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 593
Query: 320 ----------------------------------MVELLAFLLDGLHEDLNRVKHKPYIK 345
E +AFLLDGLHEDLNR+++KPY +
Sbjct: 594 RALWKGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 653
Query: 346 SKDADGRPDEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSL 405
+ D+DGRPDE VA+E W H RNDS IVD+ QGQYKS LVCPVC KVS+TFDPF+YL +
Sbjct: 654 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 713
Query: 406 PLQATTTRTMTVTVFTSDGSALPSTYTVTVPK-HGRCRDLIQVLGNICSLKQSEELKVAE 464
PL + + + F + + P + V+V K + ++++ L +K E L++AE
Sbjct: 714 PL-PQKQKVLPIYYFAREPHSKPIKFLVSVSKENSSASEVLESLSQSVHVK-PESLRLAE 771
Query: 465 IQNHSIQR-FLDDPLISLSTIKDDDHLAAYRV--PKLVK-KAVFLQLIHRLQ 512
+ + R FL P SL + D L + + P+L K + V L++ R Q
Sbjct: 772 VIKNRFHRVFL--PSHSLDAVSPTDVLLCFELLSPELAKERVVVLEVQQRPQ 821
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 102/168 (60%), Gaps = 10/168 (5%)
Query: 669 GPVTKKARTEPLSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIH 728
G + AR +L CL F R E L PE+ WYCPQCK+ R+ASK+L LWRLP VL++
Sbjct: 1086 GSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLWRLPNVLIVQ 1145
Query: 729 LKRFSYSRSM--KHKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGH 786
LKRFS+ RS + K+ V FP+ + +L+K+ + + Y+LYA+ NHYGGM GH
Sbjct: 1146 LKRFSF-RSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINHYGGMIGGH 1204
Query: 787 YTAHIKLLDENR-------WYNFDDSHISPINEDDVKSAAAYVLFYRR 827
YTA +L + W FDDS ++ ++E V + AYVLFYRR
Sbjct: 1205 YTACARLPSDRSSQRSDVGWRLFDDSTVTTVDESQVVTRYAYVLFYRR 1252
>sp|Q3UJD6|UBP19_MOUSE Ubiquitin carboxyl-terminal hydrolase 19 OS=Mus musculus GN=Usp19
PE=2 SV=1
Length = 1360
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 154/292 (52%), Gaps = 57/292 (19%)
Query: 274 GLTGLLNLGNTCFMNSAIQCLVHTPEFARYFRE-DYRREINWQNPLG------------- 319
G TGL+NLGNTCFMNS IQ L +T E +F + + EIN+ NPLG
Sbjct: 537 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 596
Query: 320 ----------------------------------MVELLAFLLDGLHEDLNRVKHKPYIK 345
E +AFLLDGLHEDLNR+++KPY +
Sbjct: 597 RALWKGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 656
Query: 346 SKDADGRPDEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSL 405
+ D+DGRPDE VA+E W H RNDS IVD+ QGQYKS LVCPVC KVS+TFDPF+YL +
Sbjct: 657 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 716
Query: 406 PLQATTTRTMTVTVFTSDGSALPSTYTVTVPK-HGRCRDLIQVLGNICSLKQSEELKVAE 464
PL + + + F + + P + V+V K + +++ L +K E L++AE
Sbjct: 717 PL-PQKQKVLPIFYFAREPHSKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 774
Query: 465 IQNHSIQR-FLDDPLISLSTIKDDDHLAAYRV--PKLVK-KAVFLQLIHRLQ 512
+ + R FL P SL + D L + + P+L K + V L++ R Q
Sbjct: 775 VIKNRFHRVFL--PSHSLDAVSPTDVLLCFELLSPELAKERVVVLEVQQRPQ 824
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 161/339 (47%), Gaps = 54/339 (15%)
Query: 505 LQLIHRLQEQEPGAAQTTSQWKAYGTPLVSSISRDDVISSGKIQSTVQRMLSPFLKKESL 564
LQL+ + E + GA + P S +S ++++SG I+ P L E +
Sbjct: 955 LQLVTPVAEGDTGAHRVWPPADRGPVPSTSGLS-SEMLASGPIEGC------PLLAGERV 1007
Query: 565 MHADSFDPSSMVTTVDPSGEAHSNSSSNIAKEDASSSKAVTLPNLPLQLVDESNVCFDLS 624
++ P G HS+ S N P + +D SN L
Sbjct: 1008 SRPEAAVP----------GYQHSSESVN-----------THTPQFFIYKIDASNREQRLE 1046
Query: 625 VEGDKTIRIPSSSTSIVVYVDWSQKLLEKYNTHFLENLLEVFKN-------GPVTKKART 677
+G+ T + + D S L+ + N E +L K G + AR
Sbjct: 1047 DKGE---------TPLELGDDCSLALVWRNNERLQEFVLVASKELECAEDPGSAGEAARA 1097
Query: 678 EPLSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRS 737
+L CL F R E L PE+ WYCPQCK+ R+ASK+L LWRLP VL++ LKRFS+ RS
Sbjct: 1098 GHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLWRLPNVLIVQLKRFSF-RS 1156
Query: 738 M--KHKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTAHIKLLD 795
+ K+ V FP+ + +L+K+ + + Y+LYA+ NHYGGM GHYTA +L +
Sbjct: 1157 FIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINHYGGMIGGHYTACARLPN 1216
Query: 796 ENR-------WYNFDDSHISPINEDDVKSAAAYVLFYRR 827
+ W FDDS ++ ++E V + AYVLFYRR
Sbjct: 1217 DRSSQRSDVGWRLFDDSTVTTVDESQVVTRYAYVLFYRR 1255
>sp|O94966|UBP19_HUMAN Ubiquitin carboxyl-terminal hydrolase 19 OS=Homo sapiens GN=USP19
PE=1 SV=2
Length = 1318
Score = 181 bits (458), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/292 (39%), Positives = 154/292 (52%), Gaps = 57/292 (19%)
Query: 274 GLTGLLNLGNTCFMNSAIQCLVHTPEFARYFRE-DYRREINWQNPLG------------- 319
G TGL+NLGNTCFMNS IQ L +T E +F + + EIN+ NPLG
Sbjct: 495 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 554
Query: 320 ----------------------------------MVELLAFLLDGLHEDLNRVKHKPYIK 345
E +AFLLDGLHEDLNR+++KPY +
Sbjct: 555 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 614
Query: 346 SKDADGRPDEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSL 405
+ D+DGRPDE VA+E W H RNDS IVD+ QGQYKS LVCPVC KVS+TFDPF+YL +
Sbjct: 615 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 674
Query: 406 PLQATTTRTMTVTVFTSDGSALPSTYTVTVPK-HGRCRDLIQVLGNICSLKQSEELKVAE 464
PL + + V F + + P + V+V K + +++ L +K E L++AE
Sbjct: 675 PL-PQKQKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 732
Query: 465 IQNHSIQR-FLDDPLISLSTIKDDDHLAAYRV--PKLVK-KAVFLQLIHRLQ 512
+ + R FL P SL T+ D L + + +L K + V L++ R Q
Sbjct: 733 VIKNRFHRVFL--PSHSLDTVSPSDTLLCFELLSSELAKERVVVLEVQQRPQ 782
Score = 154 bits (388), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 136/264 (51%), Gaps = 27/264 (10%)
Query: 581 PSGEAHSNSSSNI-AKEDASSSKAVTLPNLPLQLVDESNVCFDLSVEGDKTIRIPSSSTS 639
P+GE S + + + S + P + +D SN L +GD T
Sbjct: 960 PAGERVSRPEAAVPGYQHPSEAMNAHTPQFFIYKIDSSNREQRLEDKGD---------TP 1010
Query: 640 IVVYVDWSQKLLEKYNTHFLENLLEVFKN-------GPVTKKARTEPLSLYTCLEAFLRE 692
+ + D S L+ + N E +L K G + AR +L CL F R
Sbjct: 1011 LELGDDCSLALVWRNNERLQEFVLVASKELECAEDPGSAGEAARAGHFTLDQCLNLFTRP 1070
Query: 693 EPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSM--KHKLETFVNFPI 750
E L PE+ WYCPQCK+ R+ASK+L LWRLP VL++ LKRFS+ RS + K+ V FP+
Sbjct: 1071 EVLAPEEAWYCPQCKQHREASKQLLLWRLPNVLIVQLKRFSF-RSFIWRDKINDLVEFPV 1129
Query: 751 HDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTAHIKLLDENR-------WYNFD 803
+ +L+K+ + + Y+LYA+ NHYGGM GHYTA +L ++ W FD
Sbjct: 1130 RNLDLSKFCIGQKEEQLPSYDLYAVINHYGGMIGGHYTACARLPNDRSSQRSDVGWRLFD 1189
Query: 804 DSHISPINEDDVKSAAAYVLFYRR 827
DS ++ ++E V + AYVLFYRR
Sbjct: 1190 DSTVTTVDESQVVTRYAYVLFYRR 1213
>sp|P35125|UBP6_HUMAN Ubiquitin carboxyl-terminal hydrolase 6 OS=Homo sapiens GN=USP6
PE=1 SV=2
Length = 1406
Score = 169 bits (429), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 102/253 (40%), Positives = 134/253 (52%), Gaps = 54/253 (21%)
Query: 274 GLTGLLNLGNTCFMNSAIQCLVHTPEFARYF---REDYRREINWQNPLGMV--------- 321
G TGL NLGNTCFMNS+IQC+ +T +YF R Y E+N NP+GM
Sbjct: 530 GATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLY--ELNRTNPIGMKGHMAKCYGD 587
Query: 322 --------------------------------------ELLAFLLDGLHEDLNRVKHKPY 343
ELLAFLLDGLHEDLNRV KPY
Sbjct: 588 LVQELWSGTQKSVAPLKLRRTIAKYAPKFDGFQQQDSQELLAFLLDGLHEDLNRVHEKPY 647
Query: 344 IKSKDADGRPDEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYL 403
++ KD+DGRPD EVA E W NH+ RN SIIVD+ GQ +S + C C +SV FDPF +L
Sbjct: 648 VELKDSDGRPDWEVAAEAWDNHLRRNRSIIVDLFHGQLRSQVKCKTCGHISVRFDPFNFL 707
Query: 404 SLPLQATTTRTMTVTVFTSDGSALPSTYTVTVPKHGRCRDLIQVLGNICSLKQSEELKVA 463
SLPL + + +TV DG+ P Y + + + L + L ++C L SE++ +A
Sbjct: 708 SLPLPMDSYMDLEITVIKLDGTT-PVRYGLRLNMDEKYTGLKKQLRDLCGLN-SEQILLA 765
Query: 464 EIQNHSIQRFLDD 476
E+ + +I+ F D
Sbjct: 766 EVHDSNIKNFPQD 778
Score = 83.2 bits (204), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 72/125 (57%), Gaps = 2/125 (1%)
Query: 642 VYVDWSQKLLE-KYNTHFLENLLEVFKNGPVTKKARTEPLSLYTCLEAFLREEPLVPEDM 700
+ VDW L +Y T E +++ ++ +++A+ EP++L +CL AF EE L +M
Sbjct: 993 IAVDWHPTALHLRYQTS-QERVVDKHESVEQSRRAQAEPINLDSCLRAFTSEEELGESEM 1051
Query: 701 WYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHDFNLTKYVA 760
+YC +CK A+KKLDLWRLP L+IHLKRF + K + V F F+ + ++
Sbjct: 1052 YYCSKCKTHCLATKKLDLWRLPPFLIIHLKRFQFVNDQWIKSQKIVRFLRESFDPSAFLV 1111
Query: 761 NKNSS 765
++ +
Sbjct: 1112 PRDPA 1116
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 767 RQLYELYALTNHYGGMGSGHYTAHIKLLDENRWYNFDDSHISPINEDDVKSAAAYVLFYR 826
+ +Y LYA++ H G + GHY + K + +WY ++DS ++ D++ + +AY+LFY
Sbjct: 1309 KPIYNLYAISCHSGILSGGHYITYAKNPN-CKWYCYNDSSCEELHPDEIDTDSAYILFYE 1367
Query: 827 R 827
+
Sbjct: 1368 Q 1368
>sp|Q01988|UBP11_CANFA Ubiquitin carboxyl-terminal hydrolase 11 (Fragment) OS=Canis
familiaris GN=USP11 PE=2 SV=1
Length = 445
Score = 154 bits (388), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 119/190 (62%), Gaps = 7/190 (3%)
Query: 642 VYVDWSQKLLEKYNTHF-LENLLEVFKNGPVTKKARTEPLSLYTCLEAFLREEPLVPEDM 700
+ +DW ++ ++Y E ++ G V KKA P+ L C+E F E L E+
Sbjct: 225 IAIDWEPEMKKRYYDEVEAEGYVKHDCVGYVLKKA---PVRLQECIELFTTVETLEKENP 281
Query: 701 WYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHDFNLTKYVA 760
W+CP CK+ + A+KKLDLW LPE L+IHLKRFSY++ + KL+T V FPI D + +++V
Sbjct: 282 WFCPTCKQHQLATKKLDLWMLPETLIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVI 341
Query: 761 N-KNSSRRQL--YELYALTNHYGGMGSGHYTAHIKLLDENRWYNFDDSHISPINEDDVKS 817
+N S +L Y+L A++NHYGG+ GHYT D + FDD+ +SP+ E+ ++S
Sbjct: 342 KPQNESAPELYKYDLIAVSNHYGGLRDGHYTTFACNKDSGQSDYFDDNSVSPVTENQIES 401
Query: 818 AAAYVLFYRR 827
AAYVLFY+R
Sbjct: 402 KAAYVLFYQR 411
>sp|P39538|UBP12_YEAST Ubiquitin carboxyl-terminal hydrolase 12 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBP12 PE=1 SV=1
Length = 1254
Score = 153 bits (386), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 104/153 (67%)
Query: 675 ARTEPLSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSY 734
A+ ++L CL+ F + E L D WYCP CKE RQA+K++ LW P++L+IHLKRF
Sbjct: 957 AKERTITLDDCLQLFSKPEILGLTDSWYCPTCKEHRQATKQIQLWNTPDILLIHLKRFES 1016
Query: 735 SRSMKHKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTAHIKLL 794
RS K++ VNFPI D +L++YV K+ R +Y+LYA+ NHYGG+G GHYTA++K
Sbjct: 1017 QRSFSDKIDATVNFPITDLDLSRYVVYKDDPRGLIYDLYAVDNHYGGLGGGHYTAYVKNF 1076
Query: 795 DENRWYNFDDSHISPINEDDVKSAAAYVLFYRR 827
+N+WY FDDS ++ ++ + +AY+LFY R
Sbjct: 1077 ADNKWYYFDDSRVTETAPENSIAGSAYLLFYIR 1109
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 149/349 (42%), Gaps = 82/349 (23%)
Query: 274 GLTGLLNLGNTCFMNSAIQCLVHTPEFARYFRED-YRREINWQNPL---GMV-------- 321
G TGL+NLGNTC+MNSA+QCLVH P+ YF D Y EIN +NPL G V
Sbjct: 362 GTTGLVNLGNTCYMNSALQCLVHIPQLRDYFLYDGYEDEINEENPLGYHGYVARAFSDLV 421
Query: 322 ------------------------------------------ELLAFLLDGLHEDLNRVK 339
E LAFLLD LHEDLNR+
Sbjct: 422 QKLFQNRMSIMQRNAAFPPSMFKSTIGHFNSMFSGYMQQDSQEFLAFLLDSLHEDLNRII 481
Query: 340 HKPYIKSKDADGRPD-------EEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNK 392
K Y + D +++AD+ W H+ RN S+I D+ G YKSTL CP C
Sbjct: 482 KKEYTEKPSLSPGDDVNDWNVVKKLADDTWEMHLKRNCSVITDLFVGMYKSTLYCPECQN 541
Query: 393 VSVTFDPFMYLSLPLQATTTRTMTVTVFTSDGSALPSTYTVTVPKHGRCRDLIQVLGNIC 452
VS+TFDP+ ++LPL T T+ +F + P V + K DL +G +
Sbjct: 542 VSITFDPYNDVTLPLPVDTVWDKTIKIFPMNSP--PLLLEVELSKSSTYMDLKNYVGKMS 599
Query: 453 SLKQ---------SEELKVAEIQNHSIQRFLDDPLISLSTIKDDDHLAAYRVPKLVKKAV 503
L S ++ V S +FL L L IK D + Y +P V
Sbjct: 600 GLDPNTLFGCEIFSNQIYVNYESTESNAQFL--TLQEL--IKPADDVIFYELPVTNDNEV 655
Query: 504 FLQLIHRLQEQEPGAAQTTSQWKAYGTPLVSSISRDDVISSGKIQSTVQ 552
+ +++ E+ A +G P ++ D++ + G I+ +Q
Sbjct: 656 IVPVLNTRIEKGYKNAM------LFGVPFFITLKEDELNNPGAIRMKLQ 698
>sp|Q9USM5|UBP1_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp1 PE=3 SV=1
Length = 849
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 155/345 (44%), Gaps = 71/345 (20%)
Query: 268 TRGASVGLTGLLNLGNTCFMNSAIQCLVHTPEFARYFRED-YRREINWQNPLGMV----- 321
T +GL GL NLGN+C+MNSA+QC++HT E +YF D Y ++IN+ NPLGM+
Sbjct: 271 TINKEIGLCGLYNLGNSCYMNSALQCMIHTHELTKYFLSDSYEKDINYNNPLGMMGKVAL 330
Query: 322 -------------------------------------------ELLAFLLDGLHEDLNRV 338
E +AF LDGLHEDLNR+
Sbjct: 331 SYASLLKMIHHTADMHSVSPSSFKFIIGEFNTYFSGYRQQDSQEFIAFFLDGLHEDLNRI 390
Query: 339 KHKPYIKSKDA-DGRP--DEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNKVSV 395
+ KPY + D D P + VA++ W H RNDSIIV + QG YKSTL C +C + S
Sbjct: 391 QIKPYFERPDLFDEHPLHVQRVANQCWDIHTKRNDSIIVQLFQGMYKSTLECSICYQKST 450
Query: 396 TFDPFMYLSLPLQATTTRTMTVTVFTSDGSALPSTY-------TVTVPKHGRCRDLIQVL 448
FDPFMYL+LPL + V G+ P + + + + +Q +
Sbjct: 451 AFDPFMYLTLPLPTSAKWRHKVVYVPPFGTQSPVELYLELLMESTVIQMKFQATEKLQKM 510
Query: 449 GNICSLKQSEELKVAEIQNHSIQRFLDDPLISLSTIKDDDHLAAYRVPKLVKKAVFLQLI 508
G C EL +I + + L + I DH+ Y + + ++
Sbjct: 511 GLECG-----ELTACDIYRGKVYKVLKNKDKISKKIHKWDHVVLYGS---TANGLTIPIV 562
Query: 509 HRLQEQE-PGAAQTTSQWKAYGTPLVSSISRDDVISSGKIQSTVQ 552
H + PG+ Q+ +G PL ++ +V+++ ++ V+
Sbjct: 563 HGCKRPAMPGSYQSND---VFGFPLQLNVRSRNVLTNDLVKEIVE 604
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 98/159 (61%), Gaps = 10/159 (6%)
Query: 678 EPLSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFS---Y 734
E ++L CL F + E L +D WYCP CK R A+K+L++WRLP++LVIHL RFS
Sbjct: 688 ESITLEDCLLEFSKPEQLDLQDSWYCPGCKAFRPATKRLEIWRLPKILVIHLNRFSGHGG 747
Query: 735 SRSMKHKLETFVNFPIHDFNLTKYVAN-------KNSSRRQLYELYALTNHYGGMGSGHY 787
+ K V +P+ D NL ++++ +S + LY+LYA+ NH+G M +GHY
Sbjct: 748 DLRRRRKRRDLVVYPVFDLNLKQFLSPFIKDHEWLSSQKSMLYDLYAVDNHHGFMSNGHY 807
Query: 788 TAHIKLLDENRWYNFDDSHISPINEDDVKSAAAYVLFYR 826
TA+ + ++ FDD+ I I+ +D+ +++AYVLFYR
Sbjct: 808 TAYARDASSQTFFKFDDTAICEIDPEDIVTSSAYVLFYR 846
Score = 36.2 bits (82), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 60 EIVDTLLEGRDYILLPQEVWNQLHSWYG-GGPTLARKVISSGL-SQTELAVEVYPLRLQL 117
E+ +L E DY ++ +W+ L W+G G + RKV+ GL ++ + V++YP+ L
Sbjct: 82 ELKHSLEESIDYSIVSASLWHMLVEWFGLEGLAIERKVLLVGLAAEQKPFVDIYPINFTL 141
Query: 118 LVM 120
V+
Sbjct: 142 HVL 144
>sp|Q80U87|UBP8_MOUSE Ubiquitin carboxyl-terminal hydrolase 8 OS=Mus musculus GN=Usp8 PE=1
SV=2
Length = 1080
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 101/151 (66%), Gaps = 1/151 (0%)
Query: 675 ARTEPLSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSY 734
A T +L CL F +EE L + +YC C+ RR + KK+++W+LP VL++HLKRFSY
Sbjct: 919 ASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSY 978
Query: 735 SRSMKHKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTAHIKLL 794
K KL+T V+FP+ + +L++YV +S ++ Y L++++NHYGG+ GHYTA+ K
Sbjct: 979 DGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKK-YNLFSVSNHYGGLDGGHYTAYCKNA 1037
Query: 795 DENRWYNFDDSHISPINEDDVKSAAAYVLFY 825
RW+ FDD +S I+ V+S+AAY+LFY
Sbjct: 1038 ARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1068
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 96/194 (49%), Gaps = 48/194 (24%)
Query: 270 GASVGLTGLLNLGNTCFMNSAIQCLVHTPEFARYF-REDYRREINWQNPLGMV------- 321
G+ LTGL NLGNTC+MNS +QCL + P A YF R Y+ +IN N LG
Sbjct: 733 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 792
Query: 322 ----------------------------------------ELLAFLLDGLHEDLNRVKHK 341
ELL FL+DGLHEDLN+ ++
Sbjct: 793 GIIMKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKADNR 852
Query: 342 PYIKSKDADGRPDEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFM 401
K ++ + D + A+ W H N+SIIV + QGQ+KST+ C C + S TF+ FM
Sbjct: 853 KRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCRRRSRTFEAFM 912
Query: 402 YLSLPLQATTTRTM 415
YLSLPL +T+ T+
Sbjct: 913 YLSLPLASTSKCTL 926
>sp|P40818|UBP8_HUMAN Ubiquitin carboxyl-terminal hydrolase 8 OS=Homo sapiens GN=USP8 PE=1
SV=1
Length = 1118
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 101/151 (66%), Gaps = 1/151 (0%)
Query: 675 ARTEPLSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSY 734
A T +L CL F +EE L + +YC C+ RR + KK+++W+LP VL++HLKRFSY
Sbjct: 957 ASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSY 1016
Query: 735 SRSMKHKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTAHIKLL 794
K KL+T V+FP+ + +L++YV ++ ++ Y L++++NHYGG+ GHYTA+ K
Sbjct: 1017 DGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK-YNLFSVSNHYGGLDGGHYTAYCKNA 1075
Query: 795 DENRWYNFDDSHISPINEDDVKSAAAYVLFY 825
RW+ FDD +S I+ VKS+AAY+LFY
Sbjct: 1076 ARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
Score = 126 bits (316), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 97/194 (50%), Gaps = 48/194 (24%)
Query: 270 GASVGLTGLLNLGNTCFMNSAIQCLVHTPEFARYF-REDYRREINWQNPLGMV------- 321
G+ LTGL NLGNTC+MNS +QCL + P A YF R Y+ +IN N LG
Sbjct: 771 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 830
Query: 322 ----------------------------------------ELLAFLLDGLHEDLNRVKHK 341
ELL FL+DGLHEDLN+ ++
Sbjct: 831 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 890
Query: 342 PYIKSKDADGRPDEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFM 401
K ++ D D + A+ W H N+SIIV + QGQ+KST+ C C+K S TF+ FM
Sbjct: 891 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 950
Query: 402 YLSLPLQATTTRTM 415
YLSLPL +T+ T+
Sbjct: 951 YLSLPLASTSKCTL 964
>sp|Q70CQ4|UBP31_HUMAN Ubiquitin carboxyl-terminal hydrolase 31 OS=Homo sapiens GN=USP31
PE=2 SV=2
Length = 1352
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 96/168 (57%), Gaps = 21/168 (12%)
Query: 681 SLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKH 740
+L C + + +EE L P+D W CP CK+ +Q S L LW LP+VL+IHLKRF +
Sbjct: 597 TLSQCFQLYTKEERLAPDDAWRCPHCKQLQQGSITLSLWTLPDVLIIHLKRFRQEGDRRM 656
Query: 741 KLETFVNFPIHDFNLTKYVANKNSS-----------RRQ----------LYELYALTNHY 779
KL+ V FP+ ++T +V ++ S RR +Y+LYA+ NH+
Sbjct: 657 KLQNMVKFPLTGLDMTPHVVKRSQSSWSLPSHWSPWRRPYGLGRDPEDYIYDLYAVCNHH 716
Query: 780 GGMGSGHYTAHIKLLDENRWYNFDDSHISPINEDDVKSAAAYVLFYRR 827
G M GHYTA+ K + WY FDDS + ++ED+V + AY+LFY+R
Sbjct: 717 GTMQGGHYTAYCKNSVDGLWYCFDDSDVQQLSEDEVCTQTAYILFYQR 764
Score = 76.6 bits (187), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 114/293 (38%), Gaps = 71/293 (24%)
Query: 274 GLTGLLNLGNTCFMNSAIQCLVHTPEFARYFR-EDYRR-----EINWQNPLG-------- 319
G+ GL N GNTCFMN+ +QCL +T FA Y YR + + P G
Sbjct: 126 GVAGLRNHGNTCFMNATLQCLSNTELFAEYLALGQYRAGRPEPSPDPEQPAGRGAQGQGE 185
Query: 320 MVELLAFLL-------------------------------------------DGLHEDLN 336
+ E LA L+ D +HEDLN
Sbjct: 186 VTEQLAHLVRALWTLEYTPQHSRDFKTIVSKNALQYRGNSQHDAQEFLLWLLDRVHEDLN 245
Query: 337 R-VKHKPYIKSKDADGRPDEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNKVSV 395
VK +S +P E + + ++ Q QY+S+L CP C K S
Sbjct: 246 HSVK-----QSGQPPLKPPSETDMMPEGPSFPVCSTFVQELFQAQYRSSLTCPHCQKQSN 300
Query: 396 TFDPFMYLSLPLQATTTRTMTVTVFTSDGSALPSTYTVTVPKHG---RCRDLIQVLGNIC 452
TFDPF+ +SLP+ TR + VTV + V VP G R R+ + + I
Sbjct: 301 TFDPFLCISLPIPLPHTRPLYVTVVYQGKCSHCMRIGVAVPLSGTVARLREAVSMETKI- 359
Query: 453 SLKQSEELKVAEIQNHSIQRFLDDPLISLSTIKDDDHLAAYRVPKLVKKAVFL 505
++++ + E+ R D L T+ + D + A+ P++ + L
Sbjct: 360 ---PTDQIVLTEMYYDGFHRSFCD-TDDLETVHESDCIFAFETPEIFRPEGIL 408
>sp|O57429|UBP2_CHICK Ubiquitin carboxyl-terminal hydrolase 2 OS=Gallus gallus GN=USP2
PE=2 SV=1
Length = 357
Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 98/156 (62%), Gaps = 3/156 (1%)
Query: 670 PVTKKARTEPLSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHL 729
P+ KK E ++L CL F +E+ L ++ C +CK R + +KK + + P++LV+HL
Sbjct: 196 PIPKKGYGE-VTLMDCLRLFTKEDVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLHL 254
Query: 730 KRFSYSRSMKHKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTA 789
KRFS +R KL TFVNFP+ D +L ++ + S +Y LYA++NH G GHYTA
Sbjct: 255 KRFSEARIRASKLTTFVNFPLKDLDLREFAS--QSCNHAVYNLYAVSNHSGTTMGGHYTA 312
Query: 790 HIKLLDENRWYNFDDSHISPINEDDVKSAAAYVLFY 825
+ K + W++F+DS ++P++ V+S+ AY+LFY
Sbjct: 313 YCKSPISSEWHSFNDSRVTPMSSSHVRSSDAYLLFY 348
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 85/190 (44%), Gaps = 49/190 (25%)
Query: 267 TTRGASV--GLTGLLNLGNTCFMNSAIQCLVHTPEFARY-FREDYRREIN---------- 313
T R + V GLTGL NLGNTCFMNS +QCL +T E Y + Y R++N
Sbjct: 8 TPRSSKVVQGLTGLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTALM 67
Query: 314 ----------WQ--------------------------NPLGMVELLAFLLDGLHEDLNR 337
W N E L FLLDGLH ++NR
Sbjct: 68 SEFAKLIQLLWTSSPNDSVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHGEVNR 127
Query: 338 VKHKPYIKSKDADGRPDEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNKVSVTF 397
V +P + D PD+E + + W + R DS + D+ GQ KS+L C C S F
Sbjct: 128 VLVRPRANADTLDHLPDDEKSRQMWRRYQEREDSRVSDLFVGQLKSSLTCSECGYCSTAF 187
Query: 398 DPFMYLSLPL 407
DPF LSLP+
Sbjct: 188 DPFWDLSLPI 197
>sp|A5PN09|UBP20_DANRE Ubiquitin carboxyl-terminal hydrolase 20 OS=Danio rerio GN=usp20
PE=2 SV=1
Length = 911
Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 92/148 (62%)
Query: 680 LSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMK 739
++L CL AF + L ++M+ C +CK+ R K + RLPE+L IHLKRF +
Sbjct: 537 VTLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYS 596
Query: 740 HKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTAHIKLLDENRW 799
K+ + V+FP+ +L ++A ++ S+ Y+L ++ H+G GSGHY A+ + + +W
Sbjct: 597 FKINSHVSFPLEGLDLKPFLAKESPSQITTYDLLSVICHHGTAGSGHYIAYCQNVINGQW 656
Query: 800 YNFDDSHISPINEDDVKSAAAYVLFYRR 827
Y FDD +++ ++E V++A AYVLFYR+
Sbjct: 657 YEFDDQYVTEVHETVVQNAEAYVLFYRK 684
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 274 GLTGLLNLGNTCFMNSAIQCLVHTPEFARYFRE 306
GLTG+ N+GN+C+MN+A+Q L + P ++F++
Sbjct: 146 GLTGMKNIGNSCYMNAALQALSNCPPLTQFFQD 178
Score = 37.4 bits (85), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 88/230 (38%), Gaps = 35/230 (15%)
Query: 367 ARNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQATTTRTMTVTVFTSDGSA 426
+R S+I D+ G S + C C++VS T + F LSLP+ D +
Sbjct: 439 SRFRSVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPG-----------KEDLAK 487
Query: 427 LPSTYTVTVP-KHGRCRDLIQVLGNICSLKQSEELKVAEIQNHSIQRFLDDPLISLSTIK 485
L S+ + P K G C D G I + S + I + P+++L
Sbjct: 488 LHSSIHQSAPVKAGVCTDGYAAQGWISYIMDS----IRRFVVSCIPSWFWGPMVTL---- 539
Query: 486 DDDHLAAYRVPKLVKKAVFLQLIHRLQEQEPGAAQTTSQWKAYGTPLVSSIS----RDDV 541
+D LAA+ +K R ++ G K P + I R +V
Sbjct: 540 -EDCLAAFFAADELKGDNMYS-CERCKKLRNGVKYC----KVLRLPEILCIHLKRFRHEV 593
Query: 542 ISSGKIQSTVQRM-----LSPFLKKESLMHADSFDPSSMVTTVDPSGEAH 586
+ S KI S V L PFL KES ++D S++ +G H
Sbjct: 594 MYSFKINSHVSFPLEGLDLKPFLAKESPSQITTYDLLSVICHHGTAGSGH 643
Score = 34.3 bits (77), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 65 LLEGRDYILLPQEVWNQLHSWYGGGPTLA-RKVIS 98
L +G DY + +E W L S YGGGP +A R+ IS
Sbjct: 858 LKQGADYGQISEETWQYLLSIYGGGPEIAVRQTIS 892
>sp|B1WBD7|UBP20_XENLA Ubiquitin carboxyl-terminal hydrolase 20 OS=Xenopus laevis GN=usp20
PE=2 SV=1
Length = 840
Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 90/148 (60%)
Query: 680 LSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMK 739
++L CL AF + L ++M+ C +CK+ R K + RLPEVL IHLKRF +
Sbjct: 463 ITLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEVLCIHLKRFRHEVMYS 522
Query: 740 HKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTAHIKLLDENRW 799
K+ + V+FP+ NL ++A + SR Y+L A+ H+G SGHY ++ + + +W
Sbjct: 523 FKIGSHVSFPLEGLNLRPFLAKECVSRITTYDLLAVICHHGSASSGHYISYCQNVINGQW 582
Query: 800 YNFDDSHISPINEDDVKSAAAYVLFYRR 827
Y FDD +++ ++E V++A AYVLFYR+
Sbjct: 583 YEFDDQYVTEVHETVVQNAEAYVLFYRK 610
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 274 GLTGLLNLGNTCFMNSAIQCLVHTPEFARYFRE 306
GLTG+ N+GN+C+MN+A+Q L + P ++F E
Sbjct: 99 GLTGMKNIGNSCYMNAALQALSNCPPLTQFFLE 131
Score = 34.7 bits (78), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 368 RNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQATTTRTMTVTVFTSDGSAL 427
R S+I D+ G S + C C++VS T + F LSLP+ D + L
Sbjct: 366 RYRSVISDIFDGSILSLVQCLTCDRVSTTIETFQDLSLPIPG-----------KEDLAKL 414
Query: 428 PST-YTVTVPKHGRCRD 443
ST + TV K G C D
Sbjct: 415 HSTIHQSTVIKAGTCGD 431
Score = 33.9 bits (76), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 65 LLEGRDYILLPQEVWNQLHSWYGGGPTLA 93
L +G DY + +E WN L + YGGGP +A
Sbjct: 785 LKQGADYGQISEETWNYLLNIYGGGPEIA 813
>sp|A0JM59|UBP20_XENTR Ubiquitin carboxyl-terminal hydrolase 20 OS=Xenopus tropicalis
GN=usp20 PE=2 SV=1
Length = 884
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 90/148 (60%)
Query: 680 LSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMK 739
++L CL AF + L ++M+ C +CK+ R K + RLPE+L IHLKRF +
Sbjct: 507 ITLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYS 566
Query: 740 HKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTAHIKLLDENRW 799
K+ + V+FP+ NL ++A + SR Y+L A+ H+G SGHY ++ + + +W
Sbjct: 567 FKIGSHVSFPLEGLNLRPFLAKECVSRITTYDLLAVICHHGSASSGHYISYCQNVINGQW 626
Query: 800 YNFDDSHISPINEDDVKSAAAYVLFYRR 827
Y FDD +++ ++E V++A AYVLFYR+
Sbjct: 627 YEFDDQYVTEVHETVVQNAEAYVLFYRK 654
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 274 GLTGLLNLGNTCFMNSAIQCLVHTPEFARYFRE 306
GLTG+ N+GN+C+MN+A+Q L + P ++F E
Sbjct: 143 GLTGMKNIGNSCYMNAALQALSNCPPLTQFFLE 175
Score = 33.9 bits (76), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 65 LLEGRDYILLPQEVWNQLHSWYGGGPTLA 93
L +G DY + +E WN L + YGGGP +A
Sbjct: 829 LKQGADYGQISEETWNYLLNVYGGGPEIA 857
Score = 33.9 bits (76), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 368 RNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPL 407
R S+I D+ G S + C C++VS T + F LSLP+
Sbjct: 410 RYRSVISDIFDGSILSLVQCLTCDRVSTTIETFQDLSLPI 449
>sp|A7Z056|UBP20_BOVIN Ubiquitin carboxyl-terminal hydrolase 20 OS=Bos taurus GN=USP20
PE=2 SV=1
Length = 912
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 92/148 (62%)
Query: 680 LSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMK 739
++L CL AF + L ++M+ C +CK+ R K + RLPE+L IHLKRF +
Sbjct: 535 VTLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYS 594
Query: 740 HKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTAHIKLLDENRW 799
K+ + V+FP+ +L ++A + +S+ Y+L ++ H+G GSGHY A+ + + +W
Sbjct: 595 FKISSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTAGSGHYIAYCQNVINGQW 654
Query: 800 YNFDDSHISPINEDDVKSAAAYVLFYRR 827
Y FDD +++ ++E V++A AYVLFYR+
Sbjct: 655 YEFDDQYVTEVHETVVQNAEAYVLFYRK 682
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 274 GLTGLLNLGNTCFMNSAIQCLVHTPEFARYFRE 306
GLTG+ NLGN+C+MN+A+Q L + P ++F E
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLE 175
Score = 34.3 bits (77), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 72 ILLPQEVWNQLHSWYGGGPTLARKVISSGLSQTEL 106
++LPQ VW L+S +GGGP + + S + Q E+
Sbjct: 752 VILPQNVWEHLYSRFGGGPAVNHLYVCS-ICQVEI 785
>sp|Q5R5Z6|UBP20_PONAB Ubiquitin carboxyl-terminal hydrolase 20 OS=Pongo abelii GN=USP20
PE=2 SV=1
Length = 913
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 91/148 (61%)
Query: 680 LSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMK 739
++L CL AF + L ++M+ C +CK+ R K + RLPE+L IHLKRF +
Sbjct: 536 VTLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYS 595
Query: 740 HKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTAHIKLLDENRW 799
K+ + V+FP+ +L ++A + +S+ Y+L ++ H+G GSGHY A+ + + +W
Sbjct: 596 FKINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTAGSGHYIAYCQNVINGQW 655
Query: 800 YNFDDSHISPINEDDVKSAAAYVLFYRR 827
Y FDD +++ ++E V++A YVLFYR+
Sbjct: 656 YEFDDQYVTEVHETVVQNAEGYVLFYRK 683
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 274 GLTGLLNLGNTCFMNSAIQCLVHTPEFARYFRE 306
GLTG+ NLGN+C+MN+A+Q L + P ++F E
Sbjct: 142 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLE 174
Score = 36.6 bits (83), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 38 PSGIDNSDLVNDATAEDPGAGPEIVDTLLEGRDYILLPQEVWNQLHSWYGGGPTLA-RKV 96
P IDNS + A+ G+G L +G DY + +E W L+S YGGGP +A R+
Sbjct: 839 PGPIDNSRI-----AQVKGSGHV---QLKQGADYGQISEETWTYLNSLYGGGPEIAIRQS 890
Query: 97 ISSGLSQTELAVE 109
++ L L E
Sbjct: 891 VAQPLGPESLHGE 903
Score = 33.5 bits (75), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 368 RNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPL 407
R S+I D+ G S + C C++VS T + F LSLP+
Sbjct: 439 RYRSVISDIFDGSILSLVQCLTCDRVSATVETFQDLSLPI 478
>sp|Q9Y2K6|UBP20_HUMAN Ubiquitin carboxyl-terminal hydrolase 20 OS=Homo sapiens GN=USP20
PE=1 SV=2
Length = 914
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 91/148 (61%)
Query: 680 LSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMK 739
++L CL AF + L ++M+ C +CK+ R K + RLPE+L IHLKRF +
Sbjct: 537 VTLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYS 596
Query: 740 HKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTAHIKLLDENRW 799
K+ + V+FP+ +L ++A + +S+ Y+L ++ H+G GSGHY A+ + + +W
Sbjct: 597 FKINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTAGSGHYIAYCQNVINGQW 656
Query: 800 YNFDDSHISPINEDDVKSAAAYVLFYRR 827
Y FDD +++ ++E V++A YVLFYR+
Sbjct: 657 YEFDDQYVTEVHETVVQNAEGYVLFYRK 684
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 274 GLTGLLNLGNTCFMNSAIQCLVHTPEFARYFRE 306
GLTG+ NLGN+C+MN+A+Q L + P ++F E
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLE 175
Score = 36.2 bits (82), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 38 PSGIDNSDLVNDATAEDPGAGPEIVDTLLEGRDYILLPQEVWNQLHSWYGGGPTLA-RKV 96
P IDNS + A+ G+G L +G DY + +E W L+S YGGGP +A R+
Sbjct: 840 PGPIDNSRI-----AQVKGSGHV---QLKQGADYGQISEETWTYLNSLYGGGPEIAIRQS 891
Query: 97 ISSGLSQTELAVE 109
++ L L E
Sbjct: 892 VAQPLGPENLHGE 904
Score = 33.5 bits (75), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 368 RNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPL 407
R S+I D+ G S + C C++VS T + F LSLP+
Sbjct: 440 RYRSVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPI 479
>sp|Q28CN3|UBP33_XENTR Ubiquitin carboxyl-terminal hydrolase 33 OS=Xenopus tropicalis
GN=usp33 PE=2 SV=1
Length = 892
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 94/169 (55%), Gaps = 11/169 (6%)
Query: 662 LLEVFKN---GPVTKKARTEPLSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDL 718
LE FK+ GP ++L CL AF + L ++M+ C +CK+ R K +
Sbjct: 504 FLEYFKSWFWGPT--------VTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKV 555
Query: 719 WRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNH 778
+ PE+L IHLKRF + K+ T V+FP+ +L ++A + S+ Y+L ++ H
Sbjct: 556 QKFPEILCIHLKRFRHELMFSTKIGTHVSFPLEGLDLQPFLAKDSPSQIVTYDLLSVICH 615
Query: 779 YGGMGSGHYTAHIKLLDENRWYNFDDSHISPINEDDVKSAAAYVLFYRR 827
+G SGHY A+ + N WY FDD ++ ++E V++A AYVLFYR+
Sbjct: 616 HGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSEATVQNAEAYVLFYRK 664
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 232 SASKGTSRNHSSEISTSPNLA--SARDSDNTLGSSGVTTRGASVGLTGLLNLGNTCFMNS 289
SA S S++S+S L +A S+N + GLTGL N+GNTC+MN+
Sbjct: 102 SAKLQDSHTQESKMSSSLTLKIPAAVVSENLDIELEEEDELKTRGLTGLKNIGNTCYMNA 161
Query: 290 AIQCLVHTPEFARYF 304
A+Q L + P YF
Sbjct: 162 ALQALSNCPPLTHYF 176
Score = 36.6 bits (83), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 371 SIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPL 407
S+I D+ G S++ C C++VSVT + F LSLP+
Sbjct: 431 SVIADIFDGTIVSSVQCLTCDRVSVTLETFQDLSLPI 467
Score = 35.8 bits (81), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 38 PSGIDNSDLVNDATAEDPGAGPEIVDTLLEGRDYILLPQEVWNQLHSWYGGGPTL 92
P I N+D + P I D + ++LPQ +W+ L+S YGGGP +
Sbjct: 706 PGPISNNDFLCIHGGVPPRKASFIEDLV------VMLPQNIWDYLYSRYGGGPAV 754
>sp|Q9QZL6|UBP21_MOUSE Ubiquitin carboxyl-terminal hydrolase 21 OS=Mus musculus GN=Usp21
PE=1 SV=1
Length = 566
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 107/193 (55%), Gaps = 7/193 (3%)
Query: 637 STSIVVYVDWSQKLLEKYNTHFLENLLEVFKNG--PVTKKA-RTEPLSLYTCLEAFLREE 693
S + ++V + L+ + EVF + P+ KK +SL C F +EE
Sbjct: 369 SKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEE 428
Query: 694 PLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHDF 753
L E+ C +C+++ +++KKL + R P +LV+HL RFS SR K V+FP+
Sbjct: 429 ELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDFPLQRL 488
Query: 754 NLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTAHIKLLDENRWYNFDDSHISPINED 813
+L + ++K S +Y+LYAL NH G + GHYTA + + W+ ++DS +SP++E+
Sbjct: 489 SLGDFASDKAGS--PVYQLYALCNHSGSVHYGHYTALCRC--QTGWHVYNDSRVSPVSEN 544
Query: 814 DVKSAAAYVLFYR 826
V S+ YVLFY+
Sbjct: 545 QVASSEGYVLFYQ 557
Score = 70.1 bits (170), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 77/196 (39%), Gaps = 62/196 (31%)
Query: 274 GLTGLLNLGNTCFMNSAIQCLVHTPEFARY-FREDYRREIN------------------- 313
G GL NLGNTCF+N+ +QCL T + R D+R+E+
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 314 WQ-------NPLGMV-------------------ELLAFLLDGLHEDLNRVKHK--PYIK 345
W NP E L L++ LH ++NR + P +
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 329
Query: 346 SKDADGRP--------------DEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCN 391
S P D++ A+ W ++ R DS IVD+ GQ KS L C C
Sbjct: 330 SGPVPSPPRRGGGALHEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACG 389
Query: 392 KVSVTFDPFMYLSLPL 407
S TF+ F LSLP+
Sbjct: 390 YRSTTFEVFCDLSLPI 405
>sp|Q9UK80|UBP21_HUMAN Ubiquitin carboxyl-terminal hydrolase 21 OS=Homo sapiens GN=USP21
PE=1 SV=1
Length = 565
Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 107/193 (55%), Gaps = 7/193 (3%)
Query: 637 STSIVVYVDWSQKLLEKYNTHFLENLLEVFKNG--PVTKKA-RTEPLSLYTCLEAFLREE 693
S + ++V + L+ + EVF + P+ KK +SL C F +EE
Sbjct: 368 SKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEE 427
Query: 694 PLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHDF 753
L E+ C +C+++ +++KKL + R P +LV+HL RFS SR K V+FP+
Sbjct: 428 ELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRL 487
Query: 754 NLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTAHIKLLDENRWYNFDDSHISPINED 813
+L + ++K S +Y+LYAL NH G + GHYTA + + W+ ++DS +SP++E+
Sbjct: 488 SLGDFASDKAGS--PVYQLYALCNHSGSVHYGHYTALCRC--QTGWHVYNDSRVSPVSEN 543
Query: 814 DVKSAAAYVLFYR 826
V S+ YVLFY+
Sbjct: 544 QVASSEGYVLFYQ 556
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 77/195 (39%), Gaps = 61/195 (31%)
Query: 274 GLTGLLNLGNTCFMNSAIQCLVHTPEFARY-FREDYRREIN------------------- 313
G GL NLGNTCF+N+ +QCL T + R D+R+E+
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 314 WQ-------NPLGMV-------------------ELLAFLLDGLHEDLNRVKHK--PYIK 345
W NP E L L++ LH ++NR + P +
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 329
Query: 346 SKDADGRP-------------DEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNK 392
+ P D++ A+ W ++ R DS IVD+ GQ KS L C C
Sbjct: 330 NGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACGY 389
Query: 393 VSVTFDPFMYLSLPL 407
S TF+ F LSLP+
Sbjct: 390 RSTTFEVFCDLSLPI 404
>sp|Q2KJ72|UBP21_BOVIN Ubiquitin carboxyl-terminal hydrolase 21 OS=Bos taurus GN=USP21
PE=2 SV=1
Length = 565
Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 107/193 (55%), Gaps = 7/193 (3%)
Query: 637 STSIVVYVDWSQKLLEKYNTHFLENLLEVFKNG--PVTKKA-RTEPLSLYTCLEAFLREE 693
S + ++V + L+ + EVF + P+ KK +SL C F +EE
Sbjct: 368 SKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEE 427
Query: 694 PLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHDF 753
L E+ C +C+++ +++KKL + R P +LV+HL RFS SR K V+FP+
Sbjct: 428 ELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRL 487
Query: 754 NLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTAHIKLLDENRWYNFDDSHISPINED 813
+L + ++K S +Y+LYAL NH G + GHYTA + + W+ ++DS +SP++E+
Sbjct: 488 SLGDFASDKAGS--PVYQLYALCNHSGSVHYGHYTALCRC--QTGWHVYNDSRVSPVSEN 543
Query: 814 DVKSAAAYVLFYR 826
V S+ YVLFY+
Sbjct: 544 QVASSEGYVLFYQ 556
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 78/195 (40%), Gaps = 61/195 (31%)
Query: 274 GLTGLLNLGNTCFMNSAIQCLVHTPEFARY-FREDYRREIN------------------- 313
G GL NLGNTCF+N+ +QCL T + R D+R+E+
Sbjct: 210 GHVGLRNLGNTCFLNALLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 314 WQ-------NPLGMV-------------------ELLAFLLDGLHEDLNRVKHK--PYIK 345
W NP E L L++ LH ++NR + P +
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 329
Query: 346 SKDADGRP-------------DEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNK 392
S A P D++ A+ W ++ R DS IVD+ GQ KS L C C
Sbjct: 330 SSPAPHPPRLGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACGY 389
Query: 393 VSVTFDPFMYLSLPL 407
S TF+ F LSLP+
Sbjct: 390 RSTTFEVFCDLSLPI 404
>sp|Q8C6M1|UBP20_MOUSE Ubiquitin carboxyl-terminal hydrolase 20 OS=Mus musculus GN=Usp20
PE=1 SV=1
Length = 916
Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 90/148 (60%)
Query: 680 LSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMK 739
++L CL AF + L ++M+ C +CK+ R K + LPE+L +HLKRF +
Sbjct: 539 VTLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLCLPEILCVHLKRFRHEVMYS 598
Query: 740 HKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTAHIKLLDENRW 799
K+ + V+FP+ +L ++A + +S+ Y+L ++ H+G GSGHY A+ + + +W
Sbjct: 599 FKVSSHVSFPLEGLDLRPFLAKECTSQVTTYDLLSVICHHGTAGSGHYIAYCQNVINGQW 658
Query: 800 YNFDDSHISPINEDDVKSAAAYVLFYRR 827
Y FDD +++ ++E V++ AYVLFYR+
Sbjct: 659 YEFDDQYVTEVHETVVQNVEAYVLFYRK 686
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 274 GLTGLLNLGNTCFMNSAIQCLVHTPEFARYFRE 306
GLTG+ NLGN+C+MN+A+Q L + P ++F E
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLE 175
Score = 34.7 bits (78), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 72 ILLPQEVWNQLHSWYGGGPTLARKVISSGLSQTELAVEVYPLRLQL 117
++LPQ VW L+S +GGGP + + S + Q E+ R+++
Sbjct: 756 VILPQSVWEHLYSRFGGGPAVNHLYVCS-ICQVEIEALAKRRRVEI 800
>sp|B2GUX4|UBP21_RAT Ubiquitin carboxyl-terminal hydrolase 21 OS=Rattus norvegicus
GN=Usp21 PE=2 SV=1
Length = 565
Score = 116 bits (291), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 107/193 (55%), Gaps = 7/193 (3%)
Query: 637 STSIVVYVDWSQKLLEKYNTHFLENLLEVFKNG--PVTKKA-RTEPLSLYTCLEAFLREE 693
S + ++V + L+ + EVF + P+ KK +SL C F +EE
Sbjct: 368 SKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEE 427
Query: 694 PLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHDF 753
L E+ C +C+++ +++KKL + R P +LV+HL RFS SR K V+FP+
Sbjct: 428 ELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDFPLQRL 487
Query: 754 NLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTAHIKLLDENRWYNFDDSHISPINED 813
+L + ++K S +Y+LYAL NH G + GHYTA + + W+ ++DS +SP++E+
Sbjct: 488 SLGDFASDKVGS--PVYQLYALCNHSGSVHYGHYTALCRC--QTGWHVYNDSRVSPVSEN 543
Query: 814 DVKSAAAYVLFYR 826
V S+ YVLFY+
Sbjct: 544 QVASSEGYVLFYQ 556
Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 77/195 (39%), Gaps = 61/195 (31%)
Query: 274 GLTGLLNLGNTCFMNSAIQCLVHTPEFARY-FREDYRREIN------------------- 313
G GL NLGNTCF+N+ +QCL T + R D+R+E+
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 314 WQ-------NPLGMV-------------------ELLAFLLDGLHEDLNRVKHK--PYIK 345
W NP E L L++ LH ++NR + P +
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 329
Query: 346 SKDADGRP-------------DEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNK 392
S P D++ A+ W ++ R DS IVD+ GQ KS L C C
Sbjct: 330 SGPVPSPPRRGGALHEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACGY 389
Query: 393 VSVTFDPFMYLSLPL 407
S TF+ F LSLP+
Sbjct: 390 RSTTFEVFCDLSLPI 404
>sp|Q8R5K2|UBP33_MOUSE Ubiquitin carboxyl-terminal hydrolase 33 OS=Mus musculus GN=Usp33
PE=1 SV=2
Length = 909
Score = 116 bits (291), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 87/148 (58%)
Query: 680 LSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMK 739
++L CL AF + L ++M+ C +CK+ R K + + PE+L IHLKRF +
Sbjct: 534 VTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFS 593
Query: 740 HKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTAHIKLLDENRW 799
K+ T V+FP+ +L ++A + ++ Y+L ++ H+G SGHY A+ + N W
Sbjct: 594 TKISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTASSGHYIAYCRNNLNNLW 653
Query: 800 YNFDDSHISPINEDDVKSAAAYVLFYRR 827
Y FDD ++ ++E V++A AYVLFYR+
Sbjct: 654 YEFDDQSVTEVSESTVQNAEAYVLFYRK 681
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 274 GLTGLLNLGNTCFMNSAIQCLVHTPEFARYF 304
GLTGL N+GNTC+MN+A+Q L + P ++F
Sbjct: 152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFF 182
Score = 36.2 bits (82), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 38 PSGIDNSDLVNDATAEDPGAGPEIVDTLLEGRDYILLPQEVWNQLHSWYGGGPTL 92
P I N+D + P I D +L +LPQ +W+ L+S YGGGP +
Sbjct: 723 PGPISNNDFLCIHGGIPPRKASYIEDLVL------MLPQNIWDNLYSRYGGGPAV 771
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 11/71 (15%)
Query: 371 SIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQATTTRTMTVTVFTSDGSALPST 430
S+I D+ G S++ C C++VS+T + F LSLP+ D + L S+
Sbjct: 441 SVISDIFDGTVISSVQCLTCDRVSITLETFQDLSLPIPG-----------KEDLAKLHSS 489
Query: 431 YTVTVPKHGRC 441
T+ K G C
Sbjct: 490 SHPTIVKAGSC 500
>sp|Q5REG5|UBP33_PONAB Ubiquitin carboxyl-terminal hydrolase 33 OS=Pongo abelii GN=USP33
PE=2 SV=1
Length = 914
Score = 116 bits (291), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 87/148 (58%)
Query: 680 LSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMK 739
++L CL AF + L ++M+ C +CK+ R K + + PE+L IHLKRF +
Sbjct: 535 VTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFS 594
Query: 740 HKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTAHIKLLDENRW 799
K+ T V+FP+ +L ++A + ++ Y+L ++ H+G SGHY A+ + N W
Sbjct: 595 TKISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTASSGHYIAYCRNNLNNLW 654
Query: 800 YNFDDSHISPINEDDVKSAAAYVLFYRR 827
Y FDD ++ ++E V++A AYVLFYR+
Sbjct: 655 YEFDDQSVTEVSESTVQNAEAYVLFYRK 682
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 274 GLTGLLNLGNTCFMNSAIQCLVHTPEFARYF 304
GLTGL N+GNTC+MN+A+Q L + P ++F
Sbjct: 152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFF 182
Score = 36.6 bits (83), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 38 PSGIDNSDLVNDATAEDPGAGPEIVDTLLEGRDYILLPQEVWNQLHSWYGGGPTL 92
P I N+D + P I D +L +LPQ +W+ L+S YGGGP +
Sbjct: 724 PGPISNNDFLCIHGGVPPRKAGYIEDLVL------MLPQNIWDNLYSRYGGGPAV 772
Score = 35.4 bits (80), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 371 SIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPL 407
S+I D+ G S++ C C++VSVT + F LSLP+
Sbjct: 441 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPI 477
>sp|A6QNM7|UBP33_BOVIN Ubiquitin carboxyl-terminal hydrolase 33 OS=Bos taurus GN=USP33
PE=2 SV=1
Length = 912
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 86/148 (58%)
Query: 680 LSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMK 739
++L CL AF + L ++M+ C +CK+ R K + + PE+L IHLKRF +
Sbjct: 537 VTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFS 596
Query: 740 HKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTAHIKLLDENRW 799
K+ T V+FP+ +L ++A + + Y+L ++ H+G SGHY A+ + N W
Sbjct: 597 TKISTHVSFPLEGLDLQPFLAKDSPVQIVTYDLLSVICHHGTASSGHYIAYCRNNLNNLW 656
Query: 800 YNFDDSHISPINEDDVKSAAAYVLFYRR 827
Y FDD ++ ++E V++A AYVLFYR+
Sbjct: 657 YEFDDQSVTEVSESTVQNAEAYVLFYRK 684
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 274 GLTGLLNLGNTCFMNSAIQCLVHTPEFARYF 304
GLTGL N+GNTC+MN+A+Q L + P ++F
Sbjct: 152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFF 182
Score = 36.6 bits (83), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 38 PSGIDNSDLVNDATAEDPGAGPEIVDTLLEGRDYILLPQEVWNQLHSWYGGGPTL 92
P I N+D + P I D +L +LPQ +W+ L+S YGGGP +
Sbjct: 726 PGPISNNDFLCIHGGVPPRKAGYIEDLVL------MLPQNIWDNLYSRYGGGPAV 774
Score = 35.4 bits (80), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 371 SIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPL 407
S+I D+ G S++ C C++VSVT + F LSLP+
Sbjct: 443 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPI 479
>sp|Q8TEY7|UBP33_HUMAN Ubiquitin carboxyl-terminal hydrolase 33 OS=Homo sapiens GN=USP33
PE=1 SV=2
Length = 942
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 86/148 (58%)
Query: 680 LSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMK 739
++L CL AF + L ++M+ C +CK+ R K + PE+L IHLKRF +
Sbjct: 567 VTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQNFPEILCIHLKRFRHELMFS 626
Query: 740 HKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTAHIKLLDENRW 799
K+ T V+FP+ +L ++A + ++ Y+L ++ H+G SGHY A+ + N W
Sbjct: 627 TKISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTASSGHYIAYCRNNLNNLW 686
Query: 800 YNFDDSHISPINEDDVKSAAAYVLFYRR 827
Y FDD ++ ++E V++A AYVLFYR+
Sbjct: 687 YEFDDQSVTEVSESTVQNAEAYVLFYRK 714
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 274 GLTGLLNLGNTCFMNSAIQCLVHTPEFARYF 304
GLTGL N+GNTC+MN+A+Q L + P ++F
Sbjct: 183 GLTGLKNIGNTCYMNAALQALSNCPPLTQFF 213
Score = 36.6 bits (83), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 38 PSGIDNSDLVNDATAEDPGAGPEIVDTLLEGRDYILLPQEVWNQLHSWYGGGPTL 92
P I N+D + P I D +L +LPQ +W+ L+S YGGGP +
Sbjct: 756 PGPISNNDFLCIHGGVPPRKAGYIEDLVL------MLPQNIWDNLYSRYGGGPAV 804
Score = 35.4 bits (80), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 371 SIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPL 407
S+I D+ G S++ C C++VSVT + F LSLP+
Sbjct: 473 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPI 509
>sp|Q5UQR3|UBPL1_MIMIV Probable ubiquitin carboxyl-terminal hydrolase R319 OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_R319 PE=3 SV=1
Length = 468
Score = 113 bits (282), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 89/156 (57%), Gaps = 4/156 (2%)
Query: 674 KARTEPLSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFS 733
K E L++Y CL + +E L +++W C C E+ QA KK LW P VLVI KRF
Sbjct: 308 KNMYEQLNVYDCLREYFSQETLDADNLWNCEGCHEKVQAIKKTKLWTTPYVLVIQFKRFG 367
Query: 734 YSRSMKHKLETFVNFPIHDFNLTKYVANKN--SSRRQLYELYALTNHYGGMGSGHYTAHI 791
+R K F+N+P+ + +++ + ++ S + Y+L + NH+GG+ +GHY +
Sbjct: 368 MTRIAKD--NRFINYPMDELDVSSVICSQQFEDSVQTKYKLQCVINHHGGLNNGHYFTYS 425
Query: 792 KLLDENRWYNFDDSHISPINEDDVKSAAAYVLFYRR 827
K+ + WY F+D++ + ++ + + AY+LFY R
Sbjct: 426 KIENTGEWYEFNDTYTGKVTDNHIVNQNAYILFYIR 461
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 274 GLTGLLNLGNTCFMNSAIQCLVHTPEFARY 303
G+TG++NLGNTC+MNSA+Q L H Y
Sbjct: 40 GITGIMNLGNTCYMNSALQALSHNYLLINY 69
>sp|A5PMR2|UBP33_DANRE Ubiquitin carboxyl-terminal hydrolase 33 OS=Danio rerio GN=usp33
PE=2 SV=1
Length = 897
Score = 112 bits (281), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 85/148 (57%)
Query: 680 LSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMK 739
++L CL AF + L ++M+ C +CK+ R K + LPE+L IHLKRF +
Sbjct: 522 VTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQSLPEILCIHLKRFRHELMFS 581
Query: 740 HKLETFVNFPIHDFNLTKYVANKNSSRRQLYELYALTNHYGGMGSGHYTAHIKLLDENRW 799
K+ T V+FP+ + ++A +S+ Y+L ++ H+G SGHY A+ + W
Sbjct: 582 TKIGTHVSFPLEGLEMQPFLAKDSSALTTTYDLLSVICHHGTASSGHYIAYCRNELNQLW 641
Query: 800 YNFDDSHISPINEDDVKSAAAYVLFYRR 827
Y FDD ++ ++E V++A AYVLFY++
Sbjct: 642 YEFDDQSVTEVSESCVQNAEAYVLFYKK 669
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 274 GLTGLLNLGNTCFMNSAIQCLVHTPEFARYFRE 306
GLTGL N+GNTC+MN+A+Q L + P ++F E
Sbjct: 154 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLE 186
Score = 36.2 bits (82), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 38 PSGIDNSDLVNDATAEDPGAGPEIVDTLLEGRDYILLPQEVWNQLHSWYGGGPTL 92
P I N D + P I D +L ++PQ VW+ L+S YGGGP +
Sbjct: 711 PGPISNHDFLCAHGGIPPNKAAYIDDLVL------MIPQNVWDHLYSRYGGGPAV 759
Score = 34.7 bits (78), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 13/77 (16%)
Query: 38 PSGIDNSDLVNDATAEDPGAGPEIVDTLLEGRDYILLPQEVWNQLHSWYGGGPTL-ARKV 96
P IDNS + + TL G D + +E WN LH+ +GGGP + R
Sbjct: 825 PGPIDNSKIAVNKNGHI---------TLKPGADSGQISEETWNFLHNIHGGGPVVTVRPS 875
Query: 97 IS---SGLSQTELAVEV 110
+S S SQ+E +EV
Sbjct: 876 VSHQESETSQSEEKIEV 892
Score = 33.9 bits (76), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 371 SIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPL 407
SII +V G S++ C C++VSVT + F +SLP+
Sbjct: 436 SIISEVFDGTIVSSVQCLTCDRVSVTLENFQDISLPI 472
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 312,469,215
Number of Sequences: 539616
Number of extensions: 13455569
Number of successful extensions: 39187
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 277
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 37880
Number of HSP's gapped (non-prelim): 964
length of query: 827
length of database: 191,569,459
effective HSP length: 126
effective length of query: 701
effective length of database: 123,577,843
effective search space: 86628067943
effective search space used: 86628067943
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)