BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040388
(226 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q48082|RS1_HAEIN 30S ribosomal protein S1 OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=rpsA PE=3 SV=1
Length = 549
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 16 LELQFCKLESLRNNVTLSSLRKLCSSHVYEDDQVIEDFVAGCP-------LIEYMHVFDC 68
LE + KL+ RNNV +S + S + E +QV+E+ V G L EY D
Sbjct: 152 LEFKVIKLDQKRNNVVVSRRAVIESENSQEREQVLENLVEGSEVKGVVKNLTEYGAFVDL 211
Query: 69 GGLKCL 74
GG+ L
Sbjct: 212 GGVDGL 217
>sp|Q9UKJ8|ADA21_HUMAN Disintegrin and metalloproteinase domain-containing protein 21
OS=Homo sapiens GN=ADAM21 PE=2 SV=2
Length = 722
Score = 36.2 bits (82), Expect = 0.21, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Query: 64 HVFD--CGGLKCLELPDLNNLKEFKAYDNFRLQRLHINGVNVCSIDLASRRTLSDI 117
H+ D CG ++C + D+ L+ D+F LQ HINGV ID R +SDI
Sbjct: 554 HISDVFCGRVQCENVRDIPLLQ-----DHFTLQHTHINGVTCWGIDYHLRMNISDI 604
>sp|Q84W80|FBL42_ARATH F-box/LRR-repeat protein At3g03360 OS=Arabidopsis thaliana
GN=At3g03360 PE=2 SV=2
Length = 481
Score = 35.0 bits (79), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 2 NLPQVAFNAESIVVLELQF-CKLESLRNN----VTLSSLRKLCSSHVYEDDQVIEDFVAG 56
++P+ + S+ L L F CK + + N V+ +SL+ L H D+ I ++G
Sbjct: 151 DIPEFLYINSSLKQLYLDFGCKKDFISLNPKCSVSWTSLKNLSLYHCNISDESIAIILSG 210
Query: 57 CPLIEYMHVFDCGGLKCLEL 76
CP++E + +F C LK L+L
Sbjct: 211 CPILESLLLFFCKKLKVLDL 230
>sp|Q3EA38|FDL48_ARATH Putative F-box/FBD/LRR-repeat protein At4g13965 OS=Arabidopsis
thaliana GN=At4g13965 PE=4 SV=2
Length = 427
Score = 35.0 bits (79), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 2 NLPQVAFNAESIVVLELQFCKLESLRNNVTLSSLRKLCSSHV-YEDDQVIEDFVAGCPLI 60
++P+ +N E++ LEL++ L + +++ L SLR L +V ++D++ + ++GCP +
Sbjct: 128 SIPESLYNCETLDTLELKYSILMDVPSSICLKSLRTLHLHYVDFKDNESALNLLSGCPNL 187
Query: 61 E--YMHVFDCGGLKCLELPDLNNLKEFKAY 88
E +H + +K + +++LK Y
Sbjct: 188 ENLVVHRYPFSSVKTYTI-AVSSLKRLTIY 216
>sp|Q9LXJ7|FBD11_ARATH FBD-associated F-box protein At3g52670 OS=Arabidopsis thaliana
GN=At3g52670 PE=1 SV=2
Length = 416
Score = 34.7 bits (78), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 14/87 (16%)
Query: 30 VTLSSLRKLCSSHV-YEDDQVIEDFVAGCPLIEYMHVF-----------DCGGLKCLELP 77
V L SLR L V Y+D++ I + ++ CP++E + V+ + LK LE+
Sbjct: 152 VLLKSLRTLHLDSVSYKDEESIRNLLSSCPILENLVVYEYWYNVVNFDIEVPSLKRLEIC 211
Query: 78 DLNNLKEFKAYD-NFR-LQRLHINGVN 102
D+ + KEF+ Y N L+ L I G+N
Sbjct: 212 DVLHKKEFRRYTINVPCLKYLRIEGLN 238
>sp|Q9LV26|FBL45_ARATH Putative F-box/LRR-repeat protein At3g18150 OS=Arabidopsis thaliana
GN=At3g18150 PE=4 SV=2
Length = 456
Score = 34.3 bits (77), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 17/99 (17%)
Query: 35 LRKLCSSHVYEDDQVIEDFVAGCPLIEYMHVFDCGGLKCLELPDLNNLKEFKAYDNFRLQ 94
L+KL S D+ + + + GCP++E + + CGGL+ L+L + RL+
Sbjct: 170 LKKLYLSTCLLSDESMANILFGCPILESLTLDHCGGLRVLDLS-----------KSLRLR 218
Query: 95 RLHINGVNVCSIDLASRRTLSDINVAPCKHLEKLKLSGL 133
L IN N+ +L + + VAP H +L+ S L
Sbjct: 219 TLEIN-CNIWVPELTAMQI-----VAPHTHCLRLRNSKL 251
>sp|Q9SMT9|FBD9_ARATH FBD-associated F-box protein At3g49020 OS=Arabidopsis thaliana
GN=At3g49020 PE=2 SV=1
Length = 447
Score = 34.3 bits (77), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 11 ESIVVLELQFCKLESLRNNVTLSSLRKLCSSHV-YEDDQVIEDFVAGCPLIE 61
+++ +LEL++C L + V L SLRKL HV + D++ + + + GCP +E
Sbjct: 146 DTLEILELKYCILLDFPSLVCLKSLRKLYLYHVRFNDEESVCNLLCGCPSLE 197
>sp|Q9FH83|WRK52_ARATH Probable WRKY transcription factor 52 OS=Arabidopsis thaliana
GN=WRKY52 PE=2 SV=3
Length = 1288
Score = 33.9 bits (76), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 28/138 (20%)
Query: 67 DCGGLKCLELPDLNNLKEFKAYDNFRLQRLHINGVNVCSIDLASRRTLSDINVAPCKHLE 126
D G L CLEL D + L+ N L L ++G CS +L+ I P + L+
Sbjct: 722 DLGKLICLELKDCSCLQSLPNMANLDLNVLDLSG---CS-------SLNSIQGFP-RFLK 770
Query: 127 KLKLSGLYI--IDECPSN---------------QVSKLQFLEYLHIDCCMKLRSAKISSR 169
+L L G I + + P + ++ L+FL+ L + C +L + + R
Sbjct: 771 QLYLGGTAIREVPQLPQSLEILNAHGSCLRSLPNMANLEFLKVLDLSGCSELETIQGFPR 830
Query: 170 CLKKLFFKGEFMLDTSNL 187
LK+L+F G + + L
Sbjct: 831 NLKELYFAGTTLREVPQL 848
>sp|Q9FZ70|FDL1_ARATH F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana
GN=At1g13570 PE=2 SV=1
Length = 416
Score = 33.9 bits (76), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 2 NLPQVAFNAESIVVLELQFCKLESLRNNVTLSSLRKLCSSHVYEDDQVIEDFVAGCPLIE 61
+P FN + LEL C+ + + S L+ L + +VIE ++GCPL+E
Sbjct: 124 RVPACLFNCLKLTCLELCHCEFDPPQYFKGFSYLKSLNLHQILVAPEVIESLISGCPLLE 183
Query: 62 YM 63
++
Sbjct: 184 FL 185
>sp|O80741|FB351_ARATH Probable F-box protein At1g60180 OS=Arabidopsis thaliana
GN=At1g60180 PE=4 SV=1
Length = 322
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 21/104 (20%)
Query: 27 RNNVTLSSLRKLCSSHVYEDDQVIEDFVAGCPLIEYMHVFDCGGLKCLELPDLNNLKEFK 86
R +V+ +SL+KL D+ I ++GCP++E + + C L L+L
Sbjct: 30 RCSVSWTSLKKLSLRFCELSDECIAKILSGCPILESLTLSHCIYLTVLDLS--------- 80
Query: 87 AYDNFRLQRLHINGVNVCSIDLASRRTLSDINVAPCKHLEKLKL 130
+ RL+ L I C+ID R + VAP H+ +L+L
Sbjct: 81 --KSLRLRTLEI----ACNIDNTRPRQI----VAP--HIHRLRL 112
>sp|A5WD44|Y630_PSYWF UPF0761 membrane protein PsycPRwf_0630 OS=Psychrobacter sp. (strain
PRwf-1) GN=PsycPRwf_0630 PE=3 SV=1
Length = 538
Score = 32.0 bits (71), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 181 MLDTSNLSTFEYQGNLVSFSSNALALSQIILFLSTVISLTSI 222
+L S L EY N SSN A+ + LF++T+++LT+I
Sbjct: 78 LLPQSGLQVSEYINNFAEKSSNLTAIGALALFVTTIMTLTTI 119
>sp|Q8EP25|TRMB_OCEIH tRNA (guanine-N(7)-)-methyltransferase OS=Oceanobacillus iheyensis
(strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831)
GN=trmB PE=3 SV=1
Length = 213
Score = 32.0 bits (71), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 178 GEFMLDTSNLSTFEYQGNLVSFSSNALALSQIILFLSTVISLTSIST 224
GE +L T N FEY ++VSFS N + +++I + L + T++ T
Sbjct: 147 GEVILKTDNRGLFEY--SVVSFSQNGMNINEINVDLHAIQDETNVMT 191
>sp|Q9LXJ6|FDL21_ARATH F-box/FBD/LRR-repeat protein At3g52680 OS=Arabidopsis thaliana
GN=At3g52680 PE=2 SV=2
Length = 456
Score = 32.0 bits (71), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Query: 12 SIVVLELQFCKLESLRNNVTLSSLRKLCSSHV-YEDDQVIEDFVAGCPLIEYMHVF---- 66
++ L+L C L + + V + SLR L V Y+D+ + + ++GCP +E + ++
Sbjct: 149 TLETLKLVLCILVDIPSPVLMKSLRTLHLEFVRYKDESSVRNLLSGCPGLEELRLYRGDD 208
Query: 67 --------DCGGLKCLELPDLNNLKEFKAY 88
+ L+ L + D N+ EF Y
Sbjct: 209 SDIKVFTIEVPSLQRLTIHDNNDGPEFWGY 238
>sp|Q9LZ15|FBL78_ARATH Putative F-box/LRR-repeat protein At5g02700 OS=Arabidopsis thaliana
GN=At5g02700 PE=4 SV=1
Length = 456
Score = 31.6 bits (70), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 29 NVTLSSLRKLCSSHVYEDDQVIEDFVAGCPLIEYMHVFDCGGLKCLELPDLNNLKEFKAY 88
V+ SLR L D+ I + ++GCP++E + + C L+ L+L NL+
Sbjct: 164 TVSWKSLRNLTLRFCQIPDESIHNILSGCPILESLTLDTCRLLERLDLSKSPNLRRLDIN 223
Query: 89 DNFR 92
+R
Sbjct: 224 QQYR 227
>sp|Q96ME1|FXL18_HUMAN F-box/LRR-repeat protein 18 OS=Homo sapiens GN=FBXL18 PE=1 SV=2
Length = 805
Score = 31.2 bits (69), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 118 NVAPCKHLEKLKLSGLYIIDECPSNQVSKLQFLEYLHIDCCMKLRSAKISSRCLKKL 174
+VA C+ L K+ LSG ++ S +S LQ L L ID ++++SS C L
Sbjct: 114 HVARCRSLVKVNLSGCHLTSLRLSKMLSALQHLRSLAIDVSPGFDASQLSSECKATL 170
>sp|Q8H1M0|FDL16_ARATH F-box/FBD/LRR-repeat protein At2g26030 OS=Arabidopsis thaliana
GN=At2g26030 PE=2 SV=2
Length = 442
Score = 31.2 bits (69), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 3 LPQVAFNAESIVVLELQFCKLESLRNNVTLSSLRKLCSSHV--YEDDQVIEDFVAGCPLI 60
+PQ + ++V L L +E+ V+L SL+ + V Y+D ++E ++GCP++
Sbjct: 121 MPQNIYKCNTLVSLMLVTVGIENPEFVVSLPSLKIMHLEDVWYYDDPLIMEKIISGCPVL 180
Query: 61 E 61
E
Sbjct: 181 E 181
>sp|Q3EAE5|FDL24_ARATH Putative F-box/FBD/LRR-repeat protein At4g00315 OS=Arabidopsis
thaliana GN=At4g00315 PE=4 SV=1
Length = 441
Score = 31.2 bits (69), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 1 NNLPQVAFNAESIVVLELQFCKLESLRNNVTLSSLRKLCSSHV-YEDDQVIEDFVAGCPL 59
LP+ + +SIV+L+L+ L + V L SL+ L V Y D+ + ++ CP+
Sbjct: 123 TKLPKSLYKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGRVTYSDEDSLHRLLSNCPV 182
Query: 60 IE 61
+E
Sbjct: 183 LE 184
>sp|Q9FNJ4|FDL32_ARATH Putative F-box/FBD/LRR-repeat protein At5g22670 OS=Arabidopsis
thaliana GN=At5g22670 PE=4 SV=1
Length = 443
Score = 31.2 bits (69), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 3 LPQVAFNAESIVVLELQFCKLESLRNNVTLSSLRKL-CSSHVYEDDQVIEDFVAGCPLIE 61
+P + E++V L L L ++V+L L+ + ++Y +D ++E+ ++ CP++E
Sbjct: 127 IPHSLYTCETLVSLRLHNVSLPDF-DHVSLPRLKTMHLIDNIYPNDALLENLISSCPVLE 185
Query: 62 YMHV 65
++V
Sbjct: 186 DLNV 189
>sp|Q4PSI6|FBD13_ARATH FBD-associated F-box protein At4g13985 OS=Arabidopsis thaliana
GN=At4g13985 PE=2 SV=1
Length = 459
Score = 30.8 bits (68), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 3 LPQVAFNAESIVVLELQFCKLESLRNNVTLSSLRKLC-SSHVYEDDQVIEDFVAGCPLIE 61
+P F S++ L L L + R V+L SL+ + + V+++D E V+GCP++E
Sbjct: 147 IPPTVFTCGSLISLNLYDVYLPN-REFVSLPSLKVIVLDAVVFDEDFAFEMLVSGCPVLE 205
Query: 62 YMHV 65
+ V
Sbjct: 206 SLSV 209
>sp|Q9LYZ2|FBL80_ARATH Putative F-box/LRR-repeat protein At5g02930 OS=Arabidopsis thaliana
GN=At5g02930 PE=4 SV=1
Length = 469
Score = 30.8 bits (68), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 17/122 (13%)
Query: 8 FNAESIVVLELQFCKLESLRNNVTLSSLRKLCSSHVYEDDQVIEDFVAGCPLIEYMHVFD 67
+ S+ +EL++ L R V+ +SL+ L + D+ + ++GCP++E + +
Sbjct: 145 YTNSSLKRVELRYVDLMP-RCMVSWTSLKNLSLTDCTMSDESFLEILSGCPILESLSLKF 203
Query: 68 CGGLKCLELPDLNNLKEFKAYDNFRLQRLHINGVNVCSIDLASRRTLSDINVAPCKHLEK 127
C LK L L + RL RL I ++ + S + VAP H +
Sbjct: 204 CMSLKYLNL-----------SKSLRLTRLEIERISYIRAPMLSMQI-----VAPYIHYLR 247
Query: 128 LK 129
L+
Sbjct: 248 LR 249
>sp|Q7KML2|ACOX1_DROME Probable peroxisomal acyl-coenzyme A oxidase 1 OS=Drosophila
melanogaster GN=CG5009 PE=1 SV=1
Length = 669
Score = 30.8 bits (68), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 123 KHLEKLKLSGLYIIDECPSNQVSKLQFLEYLHIDCCMKLRSAKISSRCLKKLFFKGEFML 182
K LEKL L + D+ P + +S + E+ LR A I ++KL GE +
Sbjct: 39 KALEKLFLEDPALQDDLPISYLSHKELYEH-------SLRKACIIGEKIRKLRADGEDGV 91
Query: 183 DTSNLSTFEYQGNLVSFSSNALALSQIILFLSTVISLTSI 222
DT N G+ + N LAL ++F+ T++ ++
Sbjct: 92 DTYNALLGGSLGSAILKEGNPLAL-HYVMFVPTIMGQGTM 130
>sp|Q8RWU5|FBL3_ARATH F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana GN=FBL3 PE=2
SV=1
Length = 665
Score = 30.8 bits (68), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 18/147 (12%)
Query: 23 LESLRNNVTLSSLRKLCSSHVYE-DDQVIEDFVAGCPLIEYMHVFDCGGLKCLELPDLNN 81
L+SLR++ SL+KL +S + + ++G ++ + + C + L+ ++
Sbjct: 244 LKSLRHDC--KSLKKLDASSCQNLTHRGLTSLLSGAGYLQRLDLSHCSSVISLDFA--SS 299
Query: 82 LKEFKAYDNFRLQRLHINGVNVCSIDLASRRTLSDINVAPCKHLEKLKLSG-LYIIDECP 140
LK+ A LQ + ++G +V L + TL C L+++ LS + + DE
Sbjct: 300 LKKVSA-----LQSIRLDGCSVTPDGLKAIGTL-------CNSLKEVSLSKCVSVTDEGL 347
Query: 141 SNQVSKLQFLEYLHIDCCMKLRSAKIS 167
S+ V KL+ L L I CC KL I+
Sbjct: 348 SSLVMKLKDLRKLDITCCRKLSRVSIT 374
>sp|Q9LXQ6|FB193_ARATH Putative F-box protein At3g44060 OS=Arabidopsis thaliana
GN=At3g44060 PE=4 SV=1
Length = 427
Score = 30.4 bits (67), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 2 NLPQVAFNAESIVVLELQ---FCKLESLRNNVTLSSLRKLC-SSHVYEDDQVIEDFVAGC 57
++P FN+ ++V L L +C S + +L +L+ L S ++ DDQ+ F+A C
Sbjct: 120 SIPSKVFNSSTLVKLSLGSRLYC--PSFPPDTSLPALKVLLLDSILFRDDQLSNVFLAAC 177
Query: 58 PLIE 61
P +E
Sbjct: 178 PALE 181
>sp|Q9QZH7|FXL20_RAT F-box/LRR-repeat protein 20 OS=Rattus norvegicus GN=Fbxl20 PE=1
SV=1
Length = 276
Score = 30.4 bits (67), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 43/107 (40%), Gaps = 26/107 (24%)
Query: 1 NNLPQVAFNAESIVVLELQFCKLESLRNNVTLSSLRKLCSSHVYED--------DQVIED 52
N L A N +I VL L C + + T +SL K CS + D + ++
Sbjct: 107 NALRTFAQNCRNIEVLSLNGCTKTT---DATCTSLSKFCSKLRHLDLASCTSITNMSLKA 163
Query: 53 FVAGCPLIEYMH---------------VFDCGGLKCLELPDLNNLKE 84
GCPL+E ++ V CGGLK L L L++
Sbjct: 164 LSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLED 210
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,805,255
Number of Sequences: 539616
Number of extensions: 2818727
Number of successful extensions: 7256
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 7237
Number of HSP's gapped (non-prelim): 55
length of query: 226
length of database: 191,569,459
effective HSP length: 113
effective length of query: 113
effective length of database: 130,592,851
effective search space: 14756992163
effective search space used: 14756992163
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 59 (27.3 bits)