BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040392
(470 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 155/310 (50%), Gaps = 17/310 (5%)
Query: 148 PSNDANMPSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNL 207
P+ + + + FS EL A+D FS N++GRGGFG VYK RL DG VAVK L
Sbjct: 13 PAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVK--RL 70
Query: 208 QCGRALKG---FDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMY--- 261
+ R G F E EM+ HRNL+++ C + LV YM +GS+ +
Sbjct: 71 KEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP 130
Query: 262 SSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAK 321
S LD +R I + A L YLH IIH D+K +N+LLD+ A + DF +AK
Sbjct: 131 ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 190
Query: 322 LLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIF-- 379
L+ +D + TIG++APEY G+ S DV+ +G+ML+E TG++ +
Sbjct: 191 LMDYKDXHVXXA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLA 249
Query: 380 -NGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQR 438
+ ++ L WV L +E L D+ K++ V + +A+ CT SP +R
Sbjct: 250 NDDDVMLLDWVKGLLKEKKLEA-----LVDVDLQGNYKDEEVEQLIQVALLCTQSSPMER 304
Query: 439 INAREIVAKL 448
E+V L
Sbjct: 305 PKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 153/310 (49%), Gaps = 17/310 (5%)
Query: 148 PSNDANMPSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNL 207
P+ + + + FS EL A+D F N++GRGGFG VYK RL DG VAVK L
Sbjct: 5 PAEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVK--RL 62
Query: 208 QCGRALKG---FDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMY--- 261
+ R G F E EM+ HRNL+++ C + LV YM +GS+ +
Sbjct: 63 KEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP 122
Query: 262 SSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAK 321
S LD +R I + A L YLH IIH D+K +N+LLD+ A + DF +AK
Sbjct: 123 ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 182
Query: 322 LLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIF-- 379
L+ +D + IG++APEY G+ S DV+ +G+ML+E TG++ +
Sbjct: 183 LMDYKDXHVXXA-VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLA 241
Query: 380 -NGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQR 438
+ ++ L WV L +E L D+ K++ V + +A+ CT SP +R
Sbjct: 242 NDDDVMLLDWVKGLLKEKKLEA-----LVDVDLQGNYKDEEVEQLIQVALLCTQSSPMER 296
Query: 439 INAREIVAKL 448
E+V L
Sbjct: 297 PKMSEVVRML 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 156/299 (52%), Gaps = 17/299 (5%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKS 225
++L AT+ F LIG G FG VYK L DG +VA+K + + ++ F+ E E +
Sbjct: 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSN---YILDIFQRLNIMIDVASA 282
RH +L+ +I C L+ +YM +G+L++++Y S+ + QRL I I A
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 283 LEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
L YLH + IIH D+K N+LLD+N V ++DF I+K T DQ+ T+GY+
Sbjct: 152 LHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYI 208
Query: 343 APEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMT-LKHWVNDWLPISTME-V 400
PEY +GR++ DVYSFG++L E + + EM L W + +E +
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268
Query: 401 VGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL---LKIRDSLL 456
V NL + + + + + A++C S E R + +++ KL L++++S++
Sbjct: 269 VDPNLADK------IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESVI 321
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 155/299 (51%), Gaps = 17/299 (5%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKS 225
++L AT+ F LIG G FG VYK L DG +VA+K + + ++ F+ E E +
Sbjct: 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSN---YILDIFQRLNIMIDVASA 282
RH +L+ +I C L+ +YM +G+L++++Y S+ + QRL I I A
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 283 LEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
L YLH + IIH D+K N+LLD+N V ++DF I+K T Q+ T+GY+
Sbjct: 152 LHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYI 208
Query: 343 APEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMT-LKHWVNDWLPISTME-V 400
PEY +GR++ DVYSFG++L E + + EM L W + +E +
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268
Query: 401 VGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL---LKIRDSLL 456
V NL + + + + + A++C S E R + +++ KL L++++S++
Sbjct: 269 VDPNLADK------IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESVI 321
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 119/234 (50%), Gaps = 17/234 (7%)
Query: 156 SIATWRTFSHLELCRATDGFSEN------NLIGRGGFGSVYKARLGDGMEVAVK----VF 205
S + +FS EL T+ F E N +G GGFG VYK + + VAVK +
Sbjct: 8 SDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMV 66
Query: 206 NLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYM--YSS 263
++ + FD E ++M +H NL++++ S+ + LV YMP+GSL +
Sbjct: 67 DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG 126
Query: 264 NYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 323
L R I A+ + +LH + IH D+K +N+LLD+ A +SDF +A+
Sbjct: 127 TPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARAS 183
Query: 324 TGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNE 377
Q++ ++ + T YMAPE R G ++ D+YSFG++L+E TG +E
Sbjct: 184 EKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE 236
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 119/234 (50%), Gaps = 17/234 (7%)
Query: 156 SIATWRTFSHLELCRATDGFSEN------NLIGRGGFGSVYKARLGDGMEVAVK----VF 205
S + +FS EL T+ F E N +G GGFG VYK + + VAVK +
Sbjct: 8 SDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMV 66
Query: 206 NLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNY 265
++ + FD E ++M +H NL++++ S+ + LV YMP+GSL + +
Sbjct: 67 DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG 126
Query: 266 I--LDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 323
L R I A+ + +LH + IH D+K +N+LLD+ A +SDF +A+
Sbjct: 127 TPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARAS 183
Query: 324 TGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNE 377
Q++ + + T YMAPE R G ++ D+YSFG++L+E TG +E
Sbjct: 184 EKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE 236
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 118/234 (50%), Gaps = 17/234 (7%)
Query: 156 SIATWRTFSHLELCRATDGFSEN------NLIGRGGFGSVYKARLGDGMEVAVK----VF 205
S + +FS EL T+ F E N +G GGFG VYK + + VAVK +
Sbjct: 2 SDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMV 60
Query: 206 NLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNY 265
++ + FD E ++M +H NL++++ S+ + LV YMP+GSL + +
Sbjct: 61 DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG 120
Query: 266 I--LDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 323
L R I A+ + +LH + IH D+K +N+LLD+ A +SDF +A+
Sbjct: 121 TPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARAS 177
Query: 324 TGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNE 377
Q + + + T YMAPE R G ++ D+YSFG++L+E TG +E
Sbjct: 178 EKFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE 230
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 128/286 (44%), Gaps = 45/286 (15%)
Query: 181 IGRGGFGSVYKAR------LGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKV 234
+G G FG V+ A D M VAVK A K F E E++ +++H +++K
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYS---------------SNYILDIFQRLNIMIDV 279
C + + +V EYM HG L K++ + + L + Q L+I +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
AS + YL S +H DL N L+ N++ + DF +++ + D T+ I
Sbjct: 143 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 340 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTM 398
+M PE + +T DV+SFG++L E FT GK+P W +S
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP-----------------WFQLSNT 242
Query: 399 EVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREI 444
EV+ ++Q + C V+++ + C P+QR+N +EI
Sbjct: 243 EVI--ECITQGRV-LERPRVCPKEVYDVMLGCWQREPQQRLNIKEI 285
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRA--LKGFDVECEMMKSIRHRNLIKVISTC 238
IG G FG+V++A G +VAVK+ Q A + F E +MK +RH N++ +
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 239 SNEEFKALVLEYMPHGSLEKYMYSSNY--ILDIFQRLNIMIDVASALEYLHFGYSAPIIH 296
+ ++V EY+ GSL + ++ S LD +RL++ DVA + YLH + PI+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 297 CDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG 356
DLK N+L+D + DF +++L + T +MAPE R+ +
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSRLKAS--XFLXSKXAAGTPEWMAPEVLRDEPSNEKS 220
Query: 357 DVYSFGIMLMETFTGKKP 374
DVYSFG++L E T ++P
Sbjct: 221 DVYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 105/198 (53%), Gaps = 8/198 (4%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRA--LKGFDVECEMMKSIRHRNLIKVISTC 238
IG G FG+V++A G +VAVK+ Q A + F E +MK +RH N++ +
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 239 SNEEFKALVLEYMPHGSLEKYMYSSNY--ILDIFQRLNIMIDVASALEYLHFGYSAPIIH 296
+ ++V EY+ GSL + ++ S LD +RL++ DVA + YLH + PI+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 297 CDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG 356
+LK N+L+D + DF +++L ++ T +MAPE R+ +
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRLKAS--TFLSSKSAAGTPEWMAPEVLRDEPSNEKS 220
Query: 357 DVYSFGIMLMETFTGKKP 374
DVYSFG++L E T ++P
Sbjct: 221 DVYSFGVILWELATLQQP 238
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 148/305 (48%), Gaps = 37/305 (12%)
Query: 176 SENNLIGRGGFGSVYKARLGDG---MEVAVKVFNLQCGRALK---GFDVECEMMKSIRHR 229
+ +IG G FG VYK L EV V + L+ G K F E +M H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 230 NLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL-HF 288
N+I++ S + ++ EYM +G+L+K++ + + Q + ++ +A+ ++YL +
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM 166
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQTQTLATIGYMAPEYG 347
Y +H DL N+L++ N+V +SDF ++++L + + + T + I + APE
Sbjct: 167 NY----VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 348 REGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLL 406
+ ++ DV+SFGI++ E T G++P E+ N E+ +ND G L
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKA--IND----------GFRLP 270
Query: 407 SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVA---KLLKIRDSLLRNVGDRC 463
+ D C S ++ L M+C + +R +IV+ KL++ DS L+ + D
Sbjct: 271 TPMD--------CPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDS-LKTLADFD 321
Query: 464 IRQSI 468
R SI
Sbjct: 322 PRVSI 326
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 17/230 (7%)
Query: 160 WRTFSHLELCRATDGFSE------NNLIGRGGFGSVYKARLGDGMEVAVK----VFNLQC 209
+ +FS EL T+ F E N G GGFG VYK + + VAVK + ++
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 61
Query: 210 GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYM--YSSNYIL 267
+ FD E ++ +H NL++++ S+ + LV Y P+GSL + L
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPL 121
Query: 268 DIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327
R I A+ + +LH + IH D+K +N+LLD+ A +SDF +A+
Sbjct: 122 SWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 178
Query: 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNE 377
Q + ++ + T Y APE R G ++ D+YSFG++L+E TG +E
Sbjct: 179 QXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE 227
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 139/310 (44%), Gaps = 42/310 (13%)
Query: 170 RATDGFSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRALKGFDVE 219
R F E +L +G+G FGSV R L D G VAVK L+ F+ E
Sbjct: 6 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 65
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFK--ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMI 277
E++KS++H N++K C + + L++EY+P+GSL Y+ +D + L
Sbjct: 66 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 125
Query: 278 DVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT-L 336
+ +EYL + IH DL N+L+++ + DF + K+L + + +
Sbjct: 126 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 182
Query: 337 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GKKPTNEIF-------NGEMTL 385
+ I + APE E + S DV+SFG++L E FT K P E G+M +
Sbjct: 183 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 242
Query: 386 KHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIV 445
H + L + + + C ++ + EC + QR + R++
Sbjct: 243 FHLIE---------------LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLA 287
Query: 446 AKLLKIRDSL 455
++ +IRD++
Sbjct: 288 LRVDQIRDNM 297
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 139/310 (44%), Gaps = 42/310 (13%)
Query: 170 RATDGFSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRALKGFDVE 219
R F E +L +G+G FGSV R L D G VAVK L+ F+ E
Sbjct: 1 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 60
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFK--ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMI 277
E++KS++H N++K C + + L++EY+P+GSL Y+ +D + L
Sbjct: 61 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 120
Query: 278 DVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT-L 336
+ +EYL + IH DL N+L+++ + DF + K+L + + +
Sbjct: 121 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 177
Query: 337 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GKKPTNEIF-------NGEMTL 385
+ I + APE E + S DV+SFG++L E FT K P E G+M +
Sbjct: 178 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 237
Query: 386 KHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIV 445
H + L + + + C ++ + EC + QR + R++
Sbjct: 238 FHLIE---------------LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLA 282
Query: 446 AKLLKIRDSL 455
++ +IRD++
Sbjct: 283 LRVDQIRDNM 292
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 139/310 (44%), Gaps = 42/310 (13%)
Query: 170 RATDGFSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRALKGFDVE 219
R F E +L +G+G FGSV R L D G VAVK L+ F+ E
Sbjct: 2 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 61
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFK--ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMI 277
E++KS++H N++K C + + L++EY+P+GSL Y+ +D + L
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 121
Query: 278 DVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT-L 336
+ +EYL + IH DL N+L+++ + DF + K+L + + +
Sbjct: 122 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 178
Query: 337 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GKKPTNEIF-------NGEMTL 385
+ I + APE E + S DV+SFG++L E FT K P E G+M +
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 238
Query: 386 KHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIV 445
H + L + + + C ++ + EC + QR + R++
Sbjct: 239 FHLIE---------------LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLA 283
Query: 446 AKLLKIRDSL 455
++ +IRD++
Sbjct: 284 LRVDQIRDNM 293
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 139/310 (44%), Gaps = 42/310 (13%)
Query: 170 RATDGFSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRALKGFDVE 219
R F E +L +G+G FGSV R L D G VAVK L+ F+ E
Sbjct: 8 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 67
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFK--ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMI 277
E++KS++H N++K C + + L++EY+P+GSL Y+ +D + L
Sbjct: 68 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 127
Query: 278 DVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM-TQTQTL 336
+ +EYL + IH DL N+L+++ + DF + K+L + + +
Sbjct: 128 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 184
Query: 337 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GKKPTNEIF-------NGEMTL 385
+ I + APE E + S DV+SFG++L E FT K P E G+M +
Sbjct: 185 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 244
Query: 386 KHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIV 445
H + L + + + C ++ + EC + QR + R++
Sbjct: 245 FHLIE---------------LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLA 289
Query: 446 AKLLKIRDSL 455
++ +IRD++
Sbjct: 290 LRVDQIRDNM 299
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 134/294 (45%), Gaps = 37/294 (12%)
Query: 181 IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVI 235
+G+G FGSV R L D G VAVK L+ F+ E E++KS++H N++K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 236 STCSNEEFK--ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAP 293
C + + L++EY+P+GSL Y+ +D + L + +EYL +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 152
Query: 294 IIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEYGREGRV 352
IH DL N+L+++ + DF + K+L + + + + I + APE E +
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 212
Query: 353 STNGDVYSFGIMLMETFT----GKKPTNEIF-------NGEMTLKHWVNDWLPISTMEVV 401
S DV+SFG++L E FT K P E G+M + H +
Sbjct: 213 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE----------- 261
Query: 402 GANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSL 455
L + + + C ++ + EC + QR + R++ ++ +IRD++
Sbjct: 262 ----LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 134/294 (45%), Gaps = 37/294 (12%)
Query: 181 IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVI 235
+G+G FGSV R L D G VAVK L+ F+ E E++KS++H N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 236 STCSNEEFK--ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAP 293
C + + L++EY+P+GSL Y+ +D + L + +EYL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 134
Query: 294 IIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRV 352
IH DL N+L+++ + DF + K+L + + + + I + APE E +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 194
Query: 353 STNGDVYSFGIMLMETFT----GKKPTNEIF-------NGEMTLKHWVNDWLPISTMEVV 401
S DV+SFG++L E FT K P E G+M + H +
Sbjct: 195 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE----------- 243
Query: 402 GANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSL 455
L + + + C ++ + EC + QR + R++ ++ +IRD++
Sbjct: 244 ----LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 139/310 (44%), Gaps = 42/310 (13%)
Query: 170 RATDGFSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRALKGFDVE 219
R F E +L +G+G FGSV R L D G VAVK L+ F+ E
Sbjct: 7 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 66
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFK--ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMI 277
E++KS++H N++K C + + L++EY+P+GSL Y+ +D + L
Sbjct: 67 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 126
Query: 278 DVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT-L 336
+ +EYL + IH DL N+L+++ + DF + K+L + + +
Sbjct: 127 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 183
Query: 337 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GKKPTNEIF-------NGEMTL 385
+ I + APE E + S DV+SFG++L E FT K P E G+M +
Sbjct: 184 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 243
Query: 386 KHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIV 445
H + L + + + C ++ + EC + QR + R++
Sbjct: 244 FHLIE---------------LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLA 288
Query: 446 AKLLKIRDSL 455
++ +IRD++
Sbjct: 289 LRVDQIRDNM 298
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 139/310 (44%), Gaps = 42/310 (13%)
Query: 170 RATDGFSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRALKGFDVE 219
R F E +L +G+G FGSV R L D G VAVK L+ F+ E
Sbjct: 9 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 68
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFK--ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMI 277
E++KS++H N++K C + + L++EY+P+GSL Y+ +D + L
Sbjct: 69 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 128
Query: 278 DVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT-L 336
+ +EYL + IH DL N+L+++ + DF + K+L + + +
Sbjct: 129 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 185
Query: 337 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GKKPTNEIF-------NGEMTL 385
+ I + APE E + S DV+SFG++L E FT K P E G+M +
Sbjct: 186 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 245
Query: 386 KHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIV 445
H + L + + + C ++ + EC + QR + R++
Sbjct: 246 FHLIE---------------LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLA 290
Query: 446 AKLLKIRDSL 455
++ +IRD++
Sbjct: 291 LRVDQIRDNM 300
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 140/310 (45%), Gaps = 42/310 (13%)
Query: 170 RATDGFSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRALKGFDVE 219
R F E +L +G+G FGSV R L D G VAVK L+ F+ E
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 64
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFK--ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMI 277
E++KS++H N++K C + + L++EY+P+GSL Y+ + +D + L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTS 124
Query: 278 DVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT-L 336
+ +EYL + IH DL N+L+++ + DF + K+L + + +
Sbjct: 125 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 181
Query: 337 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GKKPTNEIF-------NGEMTL 385
+ I + APE E + S DV+SFG++L E FT K P E G+M +
Sbjct: 182 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 241
Query: 386 KHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIV 445
H + L + + + C ++ + EC + QR + R++
Sbjct: 242 FHLIE---------------LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLA 286
Query: 446 AKLLKIRDSL 455
++ +IRD++
Sbjct: 287 LRVDQIRDNM 296
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 138/310 (44%), Gaps = 42/310 (13%)
Query: 170 RATDGFSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRALKGFDVE 219
R F E +L +G+G FGSV R L D G VAVK L+ F+ E
Sbjct: 33 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 92
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFK--ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMI 277
E++KS++H N++K C + + L++EY+P+GSL Y+ +D + L
Sbjct: 93 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 152
Query: 278 DVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT-L 336
+ +EYL + IH DL N+L+++ + DF + K+L + + +
Sbjct: 153 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 209
Query: 337 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GKKPTNEIF-------NGEMTL 385
+ I + APE E + S DV+SFG++L E FT K P E G+M +
Sbjct: 210 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 269
Query: 386 KHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIV 445
H + L + + + C ++ + EC + QR + R++
Sbjct: 270 FHLIE---------------LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLA 314
Query: 446 AKLLKIRDSL 455
++ +IRD +
Sbjct: 315 LRVDQIRDQM 324
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 139/310 (44%), Gaps = 42/310 (13%)
Query: 170 RATDGFSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRALKGFDVE 219
R F E +L +G+G FGSV R L D G VAVK L+ F+ E
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 64
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFK--ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMI 277
E++KS++H N++K C + + L++EY+P+GSL Y+ +D + L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 124
Query: 278 DVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT-L 336
+ +EYL + IH DL N+L+++ + DF + K+L + + +
Sbjct: 125 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 181
Query: 337 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GKKPTNEIF-------NGEMTL 385
+ I + APE E + S DV+SFG++L E FT K P E G+M +
Sbjct: 182 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 241
Query: 386 KHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIV 445
H + L + + + C ++ + EC + QR + R++
Sbjct: 242 FHLIE---------------LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLA 286
Query: 446 AKLLKIRDSL 455
++ +IRD++
Sbjct: 287 LRVDQIRDNM 296
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 134/294 (45%), Gaps = 37/294 (12%)
Query: 181 IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVI 235
+G+G FGSV R L D G VAVK L+ F+ E E++KS++H N++K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 236 STCSNEEFK--ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAP 293
C + + L++EY+P+GSL Y+ +D + L + +EYL +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 152
Query: 294 IIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEYGREGRV 352
IH DL N+L+++ + DF + K+L + + + + I + APE E +
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 212
Query: 353 STNGDVYSFGIMLMETFT----GKKPTNEIF-------NGEMTLKHWVNDWLPISTMEVV 401
S DV+SFG++L E FT K P E G+M + H +
Sbjct: 213 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE----------- 261
Query: 402 GANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSL 455
L + + + C ++ + EC + QR + R++ ++ +IRD++
Sbjct: 262 ----LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 133/294 (45%), Gaps = 37/294 (12%)
Query: 181 IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVI 235
+G+G FGSV R L D G VAVK L+ F+ E E++KS++H N++K
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 236 STCSNEEFK--ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAP 293
C + + L++EY+P+GSL Y+ +D + L + +EYL +
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 132
Query: 294 IIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRV 352
IH DL N+L+++ + DF + K+L + + + + I + APE E +
Sbjct: 133 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 192
Query: 353 STNGDVYSFGIMLMETFT----GKKPTNEIF-------NGEMTLKHWVNDWLPISTMEVV 401
S DV+SFG++L E FT K P E G+M + H +
Sbjct: 193 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE----------- 241
Query: 402 GANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSL 455
L + + + C ++ + EC + QR + R++ ++ +IRD +
Sbjct: 242 ----LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 291
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 134/294 (45%), Gaps = 37/294 (12%)
Query: 181 IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVI 235
+G+G FGSV R L D G VAVK L+ F+ E E++KS++H N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 236 STCSNEEFK--ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAP 293
C + + L++EY+P+GSL Y+ +D + L + +EYL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 134
Query: 294 IIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRV 352
IH DL N+L+++ + DF + K+L + + + + I + APE E +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKF 194
Query: 353 STNGDVYSFGIMLMETFT----GKKPTNEIF-------NGEMTLKHWVNDWLPISTMEVV 401
S DV+SFG++L E FT K P E G+M + H +
Sbjct: 195 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE----------- 243
Query: 402 GANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSL 455
L + + + C ++ + EC + QR + R++ ++ +IRD++
Sbjct: 244 ----LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 121/282 (42%), Gaps = 40/282 (14%)
Query: 181 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKG-FDVECEMMKSIRHRNLIKVISTC 238
IGRG FG V+ RL D VAVK LK F E ++K H N++++I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 239 SNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
+ ++ +V+E + G ++ + L + L ++ D A+ +EYL S IH D
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRD 238
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDV 358
L N L+ + V +SDF +++ + + + + APE GR S+ DV
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDV 298
Query: 359 YSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAK- 416
+SFGI+L ETF+ G P NL +Q+ FV K
Sbjct: 299 WSFGILLWETFSLGASPY---------------------------PNLSNQQTREFVEKG 331
Query: 417 ------EQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIR 452
E C VF L +C P QR + I +L IR
Sbjct: 332 GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 140/310 (45%), Gaps = 42/310 (13%)
Query: 170 RATDGFSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRALKGFDVE 219
R F E +L +G+G FGSV R L D G VAVK L+ F+ E
Sbjct: 5 RDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 64
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFK--ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMI 277
E++KS++H N++K C + + L++E++P+GSL +Y+ +D + L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTS 124
Query: 278 DVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT-L 336
+ +EYL + IH DL N+L+++ + DF + K+L + + +
Sbjct: 125 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 181
Query: 337 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GKKPTNEIF-------NGEMTL 385
+ I + APE E + S DV+SFG++L E FT K P E G+M +
Sbjct: 182 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 241
Query: 386 KHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIV 445
H + L + + + C ++ + EC + QR + R++
Sbjct: 242 FHLIE---------------LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLA 286
Query: 446 AKLLKIRDSL 455
++ +IRD++
Sbjct: 287 LRVDQIRDNM 296
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 121/282 (42%), Gaps = 40/282 (14%)
Query: 181 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKG-FDVECEMMKSIRHRNLIKVISTC 238
IGRG FG V+ RL D VAVK LK F E ++K H N++++I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 239 SNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
+ ++ +V+E + G ++ + L + L ++ D A+ +EYL S IH D
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRD 238
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDV 358
L N L+ + V +SDF +++ + + + + APE GR S+ DV
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDV 298
Query: 359 YSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAK- 416
+SFGI+L ETF+ G P NL +Q+ FV K
Sbjct: 299 WSFGILLWETFSLGASPY---------------------------PNLSNQQTREFVEKG 331
Query: 417 ------EQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIR 452
E C VF L +C P QR + I +L IR
Sbjct: 332 GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 139/310 (44%), Gaps = 42/310 (13%)
Query: 170 RATDGFSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRALKGFDVE 219
R F E +L +G+G FGSV R L D G VAVK L+ F+ E
Sbjct: 3 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 62
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFK--ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMI 277
E++KS++H N++K C + + L++EY+P+GSL Y+ +D + L
Sbjct: 63 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 122
Query: 278 DVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT-L 336
+ +EYL + IH +L N+L+++ + DF + K+L + + +
Sbjct: 123 QICKGMEYLG---TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGE 179
Query: 337 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GKKPTNEIF-------NGEMTL 385
+ I + APE E + S DV+SFG++L E FT K P E G+M +
Sbjct: 180 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 239
Query: 386 KHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIV 445
H + L + + + C ++ + EC + QR + R++
Sbjct: 240 FHLIE---------------LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLA 284
Query: 446 AKLLKIRDSL 455
++ +IRD++
Sbjct: 285 LRVDQIRDNM 294
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 21/208 (10%)
Query: 180 LIGRGGFGSVYKA-RLGDGMEVAVKVF----NLQCGRALKGFDVECEMMKSIRHRNLIKV 234
+IG GGFG VY+A +GD EVAVK + + ++ E ++ ++H N+I +
Sbjct: 14 IIGIGGFGKVYRAFWIGD--EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPI 294
C E LV+E+ G L + + DI +N + +A + YLH PI
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL--VNWAVQIARGMNYLHDEAIVPI 129
Query: 295 IHCDLKPSNVLLDD--------NMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
IH DLK SN+L+ N + ++DF +A+ E T+ +MAPE
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRTTKMSAAGAYAWMAPEV 185
Query: 347 GREGRVSTNGDVYSFGIMLMETFTGKKP 374
R S DV+S+G++L E TG+ P
Sbjct: 186 IRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 134/274 (48%), Gaps = 28/274 (10%)
Query: 181 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCG--RALKGFDVECEMMKSIRHRNLIKVIST 237
IG G FG+VYK + GD VAVK+ N+ + L+ F E +++ RH N++ +
Sbjct: 20 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
+ + A+V ++ SL ++++S ++ + ++I A ++YLH + IIH
Sbjct: 77 STKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHR 132
Query: 298 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVST 354
DLK +N+ L ++ + DF +A + + S Q +I +MAPE R S
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 192
Query: 355 NGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFV 414
DVY+FGI+L E TG+ P + I N + + E+VG LS D+ V
Sbjct: 193 QSDVYAFGIVLYELMTGQLPYSNINNRDQII-------------EMVGRGSLS-PDLSKV 238
Query: 415 AKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
+ C + L EC + ++R + I+A++
Sbjct: 239 -RSNCPKRMKRLMAECLKKKRDERPSFPRILAEI 271
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 124/292 (42%), Gaps = 50/292 (17%)
Query: 181 IGRGGFGSVYKARL------GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKV 234
+G G FG V+ A D M VAVK A + F E E++ ++H+++++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYS--------------SNYILDIFQRLNIMIDVA 280
C+ +V EYM HG L +++ S + L + Q L + VA
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 281 SALEYL---HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA 337
+ + YL HF +H DL N L+ +V + DF +++ + D +T+
Sbjct: 169 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 222
Query: 338 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPIS 396
I +M PE + +T DV+SFG++L E FT GK+P W +S
Sbjct: 223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP-----------------WYQLS 265
Query: 397 TMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
E + +E C V+ + C P+QR + +++ A+L
Sbjct: 266 NTEAIDCITQGRE---LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 314
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 124/292 (42%), Gaps = 50/292 (17%)
Query: 181 IGRGGFGSVYKARL------GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKV 234
+G G FG V+ A D M VAVK A + F E E++ ++H+++++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYS--------------SNYILDIFQRLNIMIDVA 280
C+ +V EYM HG L +++ S + L + Q L + VA
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 281 SALEYL---HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA 337
+ + YL HF +H DL N L+ +V + DF +++ + D +T+
Sbjct: 140 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
Query: 338 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPIS 396
I +M PE + +T DV+SFG++L E FT GK+P W +S
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP-----------------WYQLS 236
Query: 397 TMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
E + +E C V+ + C P+QR + +++ A+L
Sbjct: 237 NTEAIDCITQGRE---LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 285
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 124/292 (42%), Gaps = 50/292 (17%)
Query: 181 IGRGGFGSVYKARL------GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKV 234
+G G FG V+ A D M VAVK A + F E E++ ++H+++++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYS--------------SNYILDIFQRLNIMIDVA 280
C+ +V EYM HG L +++ S + L + Q L + VA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 281 SALEYL---HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA 337
+ + YL HF +H DL N L+ +V + DF +++ + D +T+
Sbjct: 146 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
Query: 338 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPIS 396
I +M PE + +T DV+SFG++L E FT GK+P W +S
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP-----------------WYQLS 242
Query: 397 TMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
E + +E C V+ + C P+QR + +++ A+L
Sbjct: 243 NTEAIDCITQGRE---LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 291
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 100/205 (48%), Gaps = 6/205 (2%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
IG G FG V+ + +VA+K + + + F E E+M + H L+++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLK 300
+ LV E+M HG L Y+ + + L + +DV + YL A +IH DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHRDLA 130
Query: 301 PSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYS 360
N L+ +N V +SDF + + + +DQ + T T + + +PE R S+ DV+S
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 361 FGIMLMETFT-GKKPTNEIFNGEMT 384
FG+++ E F+ GK P N E+
Sbjct: 190 FGVLMWEVFSEGKIPYENRSNSEVV 214
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 125/278 (44%), Gaps = 28/278 (10%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
IG G FG V+ + +VA+K + + + F E E+M + H L+++ C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLK 300
+ LV E+M HG L Y+ + + L + +DV + YL A +IH DL
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLA 133
Query: 301 PSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYS 360
N L+ +N V +SDF + + + +DQ + T T + + +PE R S+ DV+S
Sbjct: 134 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 192
Query: 361 FGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPIST-MEVVGANLLSQEDIHFVAKEQ 418
FG+++ E F+ GK P N E+ V D IST + L S
Sbjct: 193 FGVLMWEVFSEGKIPYENRSNSEV-----VED---ISTGFRLYKPRLASTH--------- 235
Query: 419 CVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL 456
V+ + C E PE R ++ +L +I +S L
Sbjct: 236 ----VYQIMNHCWRERPEDRPAFSRLLRQLAEIAESGL 269
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 125/278 (44%), Gaps = 28/278 (10%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
IG G FG V+ + +VA+K + + + F E E+M + H L+++ C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLK 300
+ LV E+M HG L Y+ + + L + +DV + YL A +IH DL
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLA 128
Query: 301 PSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYS 360
N L+ +N V +SDF + + + +DQ + T T + + +PE R S+ DV+S
Sbjct: 129 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 187
Query: 361 FGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPIST-MEVVGANLLSQEDIHFVAKEQ 418
FG+++ E F+ GK P N E+ V D IST + L S
Sbjct: 188 FGVLMWEVFSEGKIPYENRSNSEV-----VED---ISTGFRLYKPRLASTH--------- 230
Query: 419 CVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL 456
V+ + C E PE R ++ +L +I +S L
Sbjct: 231 ----VYQIMNHCWKERPEDRPAFSRLLRQLAEIAESGL 264
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 125/278 (44%), Gaps = 28/278 (10%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
IG G FG V+ + +VA+K + + + F E E+M + H L+++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLK 300
+ LV E+M HG L Y+ + + L + +DV + YL A +IH DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLA 130
Query: 301 PSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYS 360
N L+ +N V +SDF + + + +DQ + T T + + +PE R S+ DV+S
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 361 FGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPIST-MEVVGANLLSQEDIHFVAKEQ 418
FG+++ E F+ GK P N E+ V D IST + L S
Sbjct: 190 FGVLMWEVFSEGKIPYENRSNSEV-----VED---ISTGFRLYKPRLASTH--------- 232
Query: 419 CVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL 456
V+ + C E PE R ++ +L +I +S L
Sbjct: 233 ----VYQIMNHCWKERPEDRPAFSRLLRQLAEIAESGL 266
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 133/274 (48%), Gaps = 28/274 (10%)
Query: 181 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCG--RALKGFDVECEMMKSIRHRNLIKVIST 237
IG G FG+VYK + GD VAVK+ N+ + L+ F E +++ RH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
+ + A+V ++ SL ++++S ++ + ++I A ++YLH + IIH
Sbjct: 89 STKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHR 144
Query: 298 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVST 354
DLK +N+ L ++ + DF +A + S Q +I +MAPE R S
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 355 NGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFV 414
DVY+FGI+L E TG+ P + I N + + E+VG LS D+ V
Sbjct: 205 QSDVYAFGIVLYELMTGQLPYSNINNRDQII-------------EMVGRGSLS-PDLSKV 250
Query: 415 AKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
+ C + L EC + ++R + I+A++
Sbjct: 251 -RSNCPKRMKRLMAECLKKKRDERPSFPRILAEI 283
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 120/283 (42%), Gaps = 42/283 (14%)
Query: 181 IGRGGFGSVYKARL------GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKV 234
+G G FG V+ A D + VAVK A K F E E++ +++H +++K
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSN------------YILDIFQRLNIMIDVASA 282
C + +V EYM HG L K++ + L Q L+I +A+
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 283 LEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
+ YL S +H DL N L+ +N++ + DF +++ + D T+ I +M
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 343 APEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVV 401
PE + +T DV+S G++L E FT GK+P W +S EV+
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP-----------------WYQLSNNEVI 240
Query: 402 GANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREI 444
++Q + C V+ L + C P R N + I
Sbjct: 241 --ECITQGRV-LQRPRTCPQEVYELMLGCWQREPHMRKNIKGI 280
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 139/293 (47%), Gaps = 36/293 (12%)
Query: 176 SENNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RALKGFDVECEMMKSIRHRN 230
S + ++G G FG V RL E++V + L+ G + + F E +M H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL-HFG 289
+I++ + + +V EYM +GSL+ ++ + + Q + ++ +AS ++YL G
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 290 YSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ-TLATIGYMAPEYGR 348
Y +H DL N+L++ N+V +SDF +A++L + ++ T+ I + +PE
Sbjct: 168 Y----VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 349 EGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLS 407
+ ++ DV+S+GI+L E + G++P +W +S +V+ A
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERP------------YW-----EMSNQDVIKA---V 263
Query: 408 QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRNVG 460
E C + ++ L ++C + R +IV+ I D L+RN G
Sbjct: 264 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPG 312
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 12/207 (5%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-ALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G+G FG V+ VA+K L+ G + + F E ++MK +RH L+++ + S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 240 NEEFKALVLEYMPHGSLEKYMY-SSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E +V EYM GSL ++ + L + Q +++ +AS + Y+ +H D
Sbjct: 74 EEPI-XIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 129
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGD 357
L+ +N+L+ +N+V ++DF +A+L+ ED T Q I + APE GR + D
Sbjct: 130 LRAANILVGENLVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 187
Query: 358 VYSFGIMLME-TFTGKKPTNEIFNGEM 383
V+SFGI+L E T G+ P + N E+
Sbjct: 188 VWSFGILLTELTTKGRVPYPGMVNREV 214
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 125/278 (44%), Gaps = 28/278 (10%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
IG G FG V+ + +VA+K + + + F E E+M + H L+++ C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLK 300
+ LV E+M HG L Y+ + + L + +DV + YL A +IH DL
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLA 131
Query: 301 PSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYS 360
N L+ +N V +SDF + + + +DQ + T T + + +PE R S+ DV+S
Sbjct: 132 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 190
Query: 361 FGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPIST-MEVVGANLLSQEDIHFVAKEQ 418
FG+++ E F+ GK P N E+ V D IST + L S
Sbjct: 191 FGVLMWEVFSEGKIPYENRSNSEV-----VED---ISTGFRLYKPRLASTH--------- 233
Query: 419 CVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL 456
V+ + C E PE R ++ +L +I +S L
Sbjct: 234 ----VYQIMNHCWRERPEDRPAFSRLLRQLAEIAESGL 267
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 124/278 (44%), Gaps = 28/278 (10%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
IG G FG V+ + +VA+K + + F E E+M + H L+++ C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLK 300
+ LV E+M HG L Y+ + + L + +DV + YL A +IH DL
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLA 150
Query: 301 PSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYS 360
N L+ +N V +SDF + + + +DQ + T T + + +PE R S+ DV+S
Sbjct: 151 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 209
Query: 361 FGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPIST-MEVVGANLLSQEDIHFVAKEQ 418
FG+++ E F+ GK P N E+ V D IST + L S
Sbjct: 210 FGVLMWEVFSEGKIPYENRSNSEV-----VED---ISTGFRLYKPRLASTH--------- 252
Query: 419 CVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL 456
V+ + C E PE R ++ +L +I +S L
Sbjct: 253 ----VYQIMNHCWKERPEDRPAFSRLLRQLAEIAESGL 286
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 104/203 (51%), Gaps = 18/203 (8%)
Query: 181 IGRGGFGSVYKARLGD--GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTC 238
IG+G FG V LGD G +VAVK ++ + F E +M +RH NL++++
Sbjct: 14 IGKGEFGDVM---LGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 239 SNEEFK-ALVLEYMPHGSLEKYMYS-SNYILDIFQRLNIMIDVASALEYLHFGYSAPIIH 296
E+ +V EYM GSL Y+ S +L L +DV A+EYL +H
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVH 125
Query: 297 CDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG 356
DL NVL+ ++ VA +SDF + K + S TQ + + APE RE + ST
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKS 180
Query: 357 DVYSFGIMLMETFT-GKKPTNEI 378
DV+SFGI+L E ++ G+ P I
Sbjct: 181 DVWSFGILLWEIYSFGRVPYPRI 203
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 104/203 (51%), Gaps = 18/203 (8%)
Query: 181 IGRGGFGSVYKARLGD--GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTC 238
IG+G FG V LGD G +VAVK ++ + F E +M +RH NL++++
Sbjct: 29 IGKGEFGDVM---LGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 239 SNEEFK-ALVLEYMPHGSLEKYMYS-SNYILDIFQRLNIMIDVASALEYLHFGYSAPIIH 296
E+ +V EYM GSL Y+ S +L L +DV A+EYL +H
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVH 140
Query: 297 CDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG 356
DL NVL+ ++ VA +SDF + K + S TQ + + APE RE + ST
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKS 195
Query: 357 DVYSFGIMLMETFT-GKKPTNEI 378
DV+SFGI+L E ++ G+ P I
Sbjct: 196 DVWSFGILLWEIYSFGRVPYPRI 218
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 133/274 (48%), Gaps = 28/274 (10%)
Query: 181 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCG--RALKGFDVECEMMKSIRHRNLIKVIST 237
IG G FG+VYK + GD VAVK+ N+ + L+ F E +++ RH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
+ + A+V ++ SL ++++S ++ + ++I A ++YLH + IIH
Sbjct: 89 STAPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHR 144
Query: 298 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVST 354
DLK +N+ L ++ + DF +A + S Q +I +MAPE R S
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 355 NGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFV 414
DVY+FGI+L E TG+ P + I N + + E+VG LS D+ V
Sbjct: 205 QSDVYAFGIVLYELMTGQLPYSNINNRDQII-------------EMVGRGSLS-PDLSKV 250
Query: 415 AKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
+ C + L EC + ++R + I+A++
Sbjct: 251 -RSNCPKRMKRLMAECLKKKRDERPSFPRILAEI 283
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 13/211 (6%)
Query: 181 IGRGGFGSVYKARL-GDGMEVAVKVFNL--QCGRALKGFDVECEMMKSIRHRNLIKVIST 237
IG G FG+VYK + GD VAVK+ + + F E +++ RH N++ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
+ + A+V ++ SL K+++ +FQ ++I A ++YLH + IIH
Sbjct: 101 MTKDNL-AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHR 156
Query: 298 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVST 354
D+K +N+ L + + + DF +A + + S Q ++ +MAPE R S
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF 216
Query: 355 NGDVYSFGIMLMETFTGKKPTNEIFNGEMTL 385
DVYS+GI+L E TG+ P + I N + +
Sbjct: 217 QSDVYSYGIVLYELMTGELPYSHINNRDQII 247
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 12/207 (5%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-ALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G+G FG V+ VA+K L+ G + + F E ++MK +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 240 NEEFKALVLEYMPHGSLEKYMYSS-NYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E +V+EYM GSL ++ L + Q +++ +AS + Y+ +H D
Sbjct: 84 EEPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGD 357
L+ +N+L+ +N+V ++DF +A+L+ ED T Q I + APE GR + D
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 358 VYSFGIMLME-TFTGKKPTNEIFNGEM 383
V+SFGI+L E T G+ P + N E+
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVNREV 224
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 103/203 (50%), Gaps = 18/203 (8%)
Query: 181 IGRGGFGSVYKARLGD--GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTC 238
IG+G FG V LGD G +VAVK ++ + F E +M +RH NL++++
Sbjct: 20 IGKGEFGDVM---LGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 239 SNEEFK-ALVLEYMPHGSLEKYMYS-SNYILDIFQRLNIMIDVASALEYLHFGYSAPIIH 296
E+ +V EYM GSL Y+ S +L L +DV A+EYL +H
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVH 131
Query: 297 CDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG 356
DL NVL+ ++ VA +SDF + K + S TQ + + APE RE ST
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREAAFSTKS 186
Query: 357 DVYSFGIMLMETFT-GKKPTNEI 378
DV+SFGI+L E ++ G+ P I
Sbjct: 187 DVWSFGILLWEIYSFGRVPYPRI 209
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 104/203 (51%), Gaps = 18/203 (8%)
Query: 181 IGRGGFGSVYKARLGD--GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTC 238
IG+G FG V LGD G +VAVK ++ + F E +M +RH NL++++
Sbjct: 201 IGKGEFGDVM---LGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 239 SNEEFK-ALVLEYMPHGSLEKYMYS-SNYILDIFQRLNIMIDVASALEYLHFGYSAPIIH 296
E+ +V EYM GSL Y+ S +L L +DV A+EYL +H
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVH 312
Query: 297 CDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG 356
DL NVL+ ++ VA +SDF + K + S TQ + + APE RE + ST
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKS 367
Query: 357 DVYSFGIMLMETFT-GKKPTNEI 378
DV+SFGI+L E ++ G+ P I
Sbjct: 368 DVWSFGILLWEIYSFGRVPYPRI 390
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 12/207 (5%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-ALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G+G FG V+ VA+K L+ G + + F E ++MK IRH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 240 NEEFKALVLEYMPHGSLEKYMYSS-NYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E +V EYM GSL ++ L + Q +++ +AS + Y+ +H D
Sbjct: 84 EEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGD 357
L+ +N+L+ +N+V ++DF +A+L+ ED T Q I + APE GR + D
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 358 VYSFGIMLME-TFTGKKPTNEIFNGEM 383
V+SFGI+L E T G+ P + N E+
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVNREV 224
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 28/281 (9%)
Query: 181 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCG--RALKGFDVECEMMKSIRHRNLIKVIST 237
IG G FG+VYK + GD VAVK+ N+ + L+ F E +++ RH N++ +
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
+ + A+V ++ SL +++ ++ + ++I A ++YLH + IIH
Sbjct: 78 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 133
Query: 298 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVST 354
DLK +N+ L +++ + DF +A + + S Q +I +MAPE R + S
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 355 NGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFV 414
DVY+FGI+L E TG+ P + I N + + +VG LS D+ V
Sbjct: 194 QSDVYAFGIVLYELMTGQLPYSNINNRDQII-------------FMVGRGYLS-PDLSKV 239
Query: 415 AKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSL 455
+ C + L EC + ++R +I+A + + SL
Sbjct: 240 -RSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 279
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 28/281 (9%)
Query: 181 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCG--RALKGFDVECEMMKSIRHRNLIKVIST 237
IG G FG+VYK + GD VAVK+ N+ + L+ F E +++ RH N++ +
Sbjct: 18 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
+ + A+V ++ SL +++ ++ + ++I A ++YLH + IIH
Sbjct: 75 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 130
Query: 298 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVST 354
DLK +N+ L +++ + DF +A + + S Q +I +MAPE R + S
Sbjct: 131 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 190
Query: 355 NGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFV 414
DVY+FGI+L E TG+ P + I N + + +VG LS D+ V
Sbjct: 191 QSDVYAFGIVLYELMTGQLPYSNINNRDQII-------------FMVGRGYLS-PDLSKV 236
Query: 415 AKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSL 455
+ C + L EC + ++R +I+A + + SL
Sbjct: 237 -RSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 276
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 28/281 (9%)
Query: 181 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCG--RALKGFDVECEMMKSIRHRNLIKVIST 237
IG G FG+VYK + GD VAVK+ N+ + L+ F E +++ RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
+ + A+V ++ SL +++ ++ + ++I A ++YLH + IIH
Sbjct: 73 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 128
Query: 298 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVST 354
DLK +N+ L +++ + DF +A + + S Q +I +MAPE R + S
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 355 NGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFV 414
DVY+FGI+L E TG+ P + I N + + +VG LS D+ V
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQII-------------FMVGRGYLS-PDLSKV 234
Query: 415 AKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSL 455
+ C + L EC + ++R +I+A + + SL
Sbjct: 235 -RSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 274
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 12/207 (5%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-ALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G+G FG V+ VA+K L+ G + + F E ++MK +RH L+++ + S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 240 NEEFKALVLEYMPHGSLEKYMY-SSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E +V EYM GSL ++ + L + Q +++ +AS + Y+ +H D
Sbjct: 77 EEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 132
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGD 357
L+ +N+L+ +N+V ++DF +A+L+ ED T Q I + APE GR + D
Sbjct: 133 LRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 190
Query: 358 VYSFGIMLME-TFTGKKPTNEIFNGEM 383
V+SFGI+L E T G+ P + N E+
Sbjct: 191 VWSFGILLTELTTKGRVPYPGMVNREV 217
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 12/207 (5%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-ALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G+G FG V+ VA+K L+ G + + F E ++MK +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 240 NEEFKALVLEYMPHGSLEKYMYSS-NYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E +V+EYM GSL ++ L + Q +++ +AS + Y+ +H D
Sbjct: 84 EEPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGD 357
L+ +N+L+ +N+V ++DF +A+L+ ED T Q I + APE GR + D
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 358 VYSFGIMLME-TFTGKKPTNEIFNGEM 383
V+SFGI+L E T G+ P + N E+
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVNREV 224
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 115/229 (50%), Gaps = 20/229 (8%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNL---QCGRALKGFDVECEMMKSIRHRNLIKVIS 236
+G GG +VY A ++VA+K + + LK F+ E + H+N++ +I
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 237 TCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIH 296
++ LV+EY+ +L +Y+ S+ L + +N + +++ H I+H
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYI-ESHGPLSVDTAINFTNQILDGIKHAH---DMRIVH 134
Query: 297 CDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT-QTLATIGYMAPEYGREGRVSTN 355
D+KP N+L+D N + DF IAK L+ + S+TQT L T+ Y +PE +
Sbjct: 135 RDIKPQNILIDSNKTLKIFDFGIAKALS--ETSLTQTNHVLGTVQYFSPEQAKGEATDEC 192
Query: 356 GDVYSFGIMLMETFTGKKPTNEIFNGE----MTLKHWVNDWLPISTMEV 400
D+YS GI+L E G+ P FNGE + +KH + D +P T +V
Sbjct: 193 TDIYSIGIVLYEMLVGEPP----FNGETAVSIAIKH-IQDSVPNVTTDV 236
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 139/294 (47%), Gaps = 36/294 (12%)
Query: 175 FSENNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RALKGFDVECEMMKSIRHR 229
S + ++G G FG V RL E++V + L+ G + + F E +M H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 230 NLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL-HF 288
N+I++ + + +V EYM +GSL+ ++ + + Q + ++ +AS ++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ-TLATIGYMAPEYG 347
GY +H DL N+L++ N+V +SDF ++++L + ++ T+ I + +PE
Sbjct: 167 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 348 REGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLL 406
+ ++ DV+S+GI+L E + G++P +W +S +V+ A
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERP------------YW-----EMSNQDVIKA--- 262
Query: 407 SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRNVG 460
E C + ++ L ++C + R +IV+ I D L+RN G
Sbjct: 263 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPG 312
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 139/294 (47%), Gaps = 36/294 (12%)
Query: 175 FSENNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RALKGFDVECEMMKSIRHR 229
S + ++G G FG V RL E++V + L+ G + + F E +M H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 230 NLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL-HF 288
N+I++ + + +V EYM +GSL+ ++ + + Q + ++ +AS ++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ-TLATIGYMAPEYG 347
GY +H DL N+L++ N+V +SDF ++++L + ++ T+ I + +PE
Sbjct: 167 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 348 REGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLL 406
+ ++ DV+S+GI+L E + G++P +W +S +V+ A
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERP------------YW-----EMSNQDVIKA--- 262
Query: 407 SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRNVG 460
E C + ++ L ++C + R +IV+ I D L+RN G
Sbjct: 263 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPG 312
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 139/293 (47%), Gaps = 36/293 (12%)
Query: 176 SENNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RALKGFDVECEMMKSIRHRN 230
S + ++G G FG V RL E++V + L+ G + + F E +M H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL-HFG 289
+I++ + + +V EYM +GSL+ ++ + + Q + ++ +AS ++YL G
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 290 YSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ-TLATIGYMAPEYGR 348
Y +H DL N+L++ N+V +SDF ++++L + ++ T+ I + +PE
Sbjct: 168 Y----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 349 EGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLS 407
+ ++ DV+S+GI+L E + G++P +W +S +V+ A
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERP------------YW-----EMSNQDVIKA---V 263
Query: 408 QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRNVG 460
E C + ++ L ++C + R +IV+ I D L+RN G
Sbjct: 264 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPG 312
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 28/281 (9%)
Query: 181 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCG--RALKGFDVECEMMKSIRHRNLIKVIST 237
IG G FG+VYK + GD VAVK+ N+ + L+ F E +++ RH N++ +
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
+ + A+V ++ SL +++ ++ + ++I A ++YLH + IIH
Sbjct: 78 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 133
Query: 298 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVST 354
DLK +N+ L +++ + DF +A + + S Q +I +MAPE R + S
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 355 NGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFV 414
DVY+FGI+L E TG+ P + I N + + +VG LS D+ V
Sbjct: 194 QSDVYAFGIVLYELMTGQLPYSNINNRDQII-------------FMVGRGYLS-PDLSKV 239
Query: 415 AKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSL 455
+ C + L EC + ++R +I+A + + SL
Sbjct: 240 -RSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 279
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 139/294 (47%), Gaps = 36/294 (12%)
Query: 175 FSENNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RALKGFDVECEMMKSIRHR 229
S + ++G G FG V RL E++V + L+ G + + F E +M H
Sbjct: 45 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 104
Query: 230 NLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL-HF 288
N+I++ + + +V EYM +GSL+ ++ + + Q + ++ +AS ++YL
Sbjct: 105 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 164
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ-TLATIGYMAPEYG 347
GY +H DL N+L++ N+V +SDF ++++L + ++ T+ I + +PE
Sbjct: 165 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 220
Query: 348 REGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLL 406
+ ++ DV+S+GI+L E + G++P +W +S +V+ A
Sbjct: 221 AYRKFTSASDVWSYGIVLWEVMSYGERP------------YW-----EMSNQDVIKA--- 260
Query: 407 SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRNVG 460
E C + ++ L ++C + R +IV+ I D L+RN G
Sbjct: 261 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPG 310
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 132/274 (48%), Gaps = 28/274 (10%)
Query: 181 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCG--RALKGFDVECEMMKSIRHRNLIKVIST 237
IG G FG+VYK + GD VAVK+ N+ + L+ F E +++ RH N++ +
Sbjct: 43 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
+ + A+V ++ SL +++ ++ + ++I A ++YLH + IIH
Sbjct: 100 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 155
Query: 298 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVST 354
DLK +N+ L +++ + DF +A + + S Q +I +MAPE R + S
Sbjct: 156 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 215
Query: 355 NGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFV 414
DVY+FGI+L E TG+ P + I N + + +VG LS D+ V
Sbjct: 216 QSDVYAFGIVLYELMTGQLPYSNINNRDQII-------------FMVGRGYLS-PDLSKV 261
Query: 415 AKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
+ C + L EC + ++R +I+A +
Sbjct: 262 -RSNCPKAMKRLMAECLKKKRDERPLFPQILASI 294
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 139/294 (47%), Gaps = 36/294 (12%)
Query: 175 FSENNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RALKGFDVECEMMKSIRHR 229
S + ++G G FG V RL E++V + L+ G + + F E +M H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 230 NLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL-HF 288
N+I++ + + +V EYM +GSL+ ++ + + Q + ++ +AS ++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ-TLATIGYMAPEYG 347
GY +H DL N+L++ N+V +SDF ++++L + ++ T+ I + +PE
Sbjct: 167 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 348 REGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLL 406
+ ++ DV+S+GI+L E + G++P +W +S +V+ A
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERP------------YW-----EMSNQDVIKA--- 262
Query: 407 SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRNVG 460
E C + ++ L ++C + R +IV+ I D L+RN G
Sbjct: 263 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPG 312
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 132/274 (48%), Gaps = 28/274 (10%)
Query: 181 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCG--RALKGFDVECEMMKSIRHRNLIKVIST 237
IG G FG+VYK + GD VAVK+ N+ + L+ F E +++ RH N++ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
+ + A+V ++ SL +++ ++ + ++I A ++YLH + IIH
Sbjct: 101 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 156
Query: 298 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVST 354
DLK +N+ L +++ + DF +A + + S Q +I +MAPE R + S
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 355 NGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFV 414
DVY+FGI+L E TG+ P + I N + + +VG LS D+ V
Sbjct: 217 QSDVYAFGIVLYELMTGQLPYSNINNRDQII-------------FMVGRGYLS-PDLSKV 262
Query: 415 AKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
+ C + L EC + ++R +I+A +
Sbjct: 263 -RSNCPKAMKRLMAECLKKKRDERPLFPQILASI 295
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 12/207 (5%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-ALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G+G FG V+ VA+K L+ G + + F E ++MK +RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 240 NEEFKALVLEYMPHGSLEKYMY-SSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E +V EYM GSL ++ + L + Q +++ +AS + Y+ +H D
Sbjct: 250 EEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 305
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGD 357
L+ +N+L+ +N+V ++DF +A+L+ ED T Q I + APE GR + D
Sbjct: 306 LRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 358 VYSFGIMLME-TFTGKKPTNEIFNGEM 383
V+SFGI+L E T G+ P + N E+
Sbjct: 364 VWSFGILLTELTTKGRVPYPGMVNREV 390
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 139/294 (47%), Gaps = 36/294 (12%)
Query: 175 FSENNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RALKGFDVECEMMKSIRHR 229
S + ++G G FG V RL E++V + L+ G + + F E +M H
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 230 NLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL-HF 288
N+I++ + + +V EYM +GSL+ ++ + + Q + ++ +AS ++YL
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 137
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ-TLATIGYMAPEYG 347
GY +H DL N+L++ N+V +SDF ++++L + ++ T+ I + +PE
Sbjct: 138 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 348 REGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLL 406
+ ++ DV+S+GI+L E + G++P +W +S +V+ A
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMSYGERP------------YW-----EMSNQDVIKA--- 233
Query: 407 SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRNVG 460
E C + ++ L ++C + R +IV+ I D L+RN G
Sbjct: 234 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPG 283
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 12/207 (5%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-ALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G+G FG V+ VA+K L+ G + + F E ++MK +RH L+++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 240 NEEFKALVLEYMPHGSLEKYMY-SSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E +V EYM GSL ++ + L + Q +++ +AS + Y+ +H D
Sbjct: 81 EEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRD 136
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGD 357
L+ +N+L+ +N+V ++DF +A+L+ ED T Q I + APE GR + D
Sbjct: 137 LRAANILVGENLVCKVADFGLARLI--EDNEWTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 358 VYSFGIMLME-TFTGKKPTNEIFNGEM 383
V+SFGI+L E T G+ P + N E+
Sbjct: 195 VWSFGILLTELTTKGRVPYPGMVNREV 221
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 139/294 (47%), Gaps = 36/294 (12%)
Query: 175 FSENNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RALKGFDVECEMMKSIRHR 229
S + ++G G FG V RL E++V + L+ G + + F E +M H
Sbjct: 35 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 94
Query: 230 NLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL-HF 288
N+I++ + + +V EYM +GSL+ ++ + + Q + ++ +AS ++YL
Sbjct: 95 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 154
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ-TLATIGYMAPEYG 347
GY +H DL N+L++ N+V +SDF ++++L + ++ T+ I + +PE
Sbjct: 155 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 210
Query: 348 REGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLL 406
+ ++ DV+S+GI+L E + G++P +W +S +V+ A
Sbjct: 211 AYRKFTSASDVWSYGIVLWEVMSYGERP------------YW-----EMSNQDVIKA--- 250
Query: 407 SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRNVG 460
E C + ++ L ++C + R +IV+ I D L+RN G
Sbjct: 251 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPG 300
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 138/293 (47%), Gaps = 36/293 (12%)
Query: 176 SENNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RALKGFDVECEMMKSIRHRN 230
S + ++G G FG V RL E++V + L+ G + + F E +M H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL-HFG 289
+I++ + + +V EYM +GSL+ ++ + + Q + ++ +AS ++YL G
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 290 YSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ-TLATIGYMAPEYGR 348
Y +H DL N+L++ N+V +SDF + ++L + ++ T+ I + +PE
Sbjct: 168 Y----VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 349 EGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLS 407
+ ++ DV+S+GI+L E + G++P +W +S +V+ A
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERP------------YW-----EMSNQDVIKA---V 263
Query: 408 QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRNVG 460
E C + ++ L ++C + R +IV+ I D L+RN G
Sbjct: 264 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPG 312
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 12/207 (5%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-ALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G+G FG V+ VA+K L+ G + + F E ++MK +RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 240 NEEFKALVLEYMPHGSLEKYMY-SSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E +V EYM GSL ++ + L + Q +++ +AS + Y+ +H D
Sbjct: 250 EEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 305
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGD 357
L+ +N+L+ +N+V ++DF +A+L+ ED T Q I + APE GR + D
Sbjct: 306 LRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 358 VYSFGIMLME-TFTGKKPTNEIFNGEM 383
V+SFGI+L E T G+ P + N E+
Sbjct: 364 VWSFGILLTELTTKGRVPYPGMVNREV 390
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 28/281 (9%)
Query: 181 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCG--RALKGFDVECEMMKSIRHRNLIKVIST 237
IG G FG+VYK + GD VAVK+ N+ + L+ F E +++ RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
+ + A+V ++ SL +++ ++ + ++I A ++YLH + IIH
Sbjct: 73 STAPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 128
Query: 298 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVST 354
DLK +N+ L +++ + DF +A + + S Q +I +MAPE R + S
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 355 NGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFV 414
DVY+FGI+L E TG+ P + I N + + +VG LS D+ V
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQII-------------FMVGRGYLS-PDLSKV 234
Query: 415 AKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSL 455
+ C + L EC + ++R +I+A + + SL
Sbjct: 235 -RSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 274
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 12/207 (5%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-ALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G+G FG V+ VA+K L+ G + + F E ++MK +RH L+++ + S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 240 NEEFKALVLEYMPHGSLEKYMYSS-NYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E +V EYM GSL ++ L + Q +++ +AS + Y+ +H D
Sbjct: 73 EEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 128
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGD 357
L+ +N+L+ +N+V ++DF +A+L+ ED T Q I + APE GR + D
Sbjct: 129 LRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 186
Query: 358 VYSFGIMLME-TFTGKKPTNEIFNGEM 383
V+SFGI+L E T G+ P + N E+
Sbjct: 187 VWSFGILLTELTTKGRVPYPGMVNREV 213
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 12/207 (5%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-ALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G+G FG V+ VA+K L+ G + + F E ++MK +RH L+++ + S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 240 NEEFKALVLEYMPHGSLEKYMYSS-NYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E +V EYM GSL ++ L + Q +++ +AS + Y+ +H D
Sbjct: 75 EEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 130
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGD 357
L+ +N+L+ +N+V ++DF +A+L+ ED T Q I + APE GR + D
Sbjct: 131 LRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 358 VYSFGIMLME-TFTGKKPTNEIFNGEM 383
V+SFGI+L E T G+ P + N E+
Sbjct: 189 VWSFGILLTELTTKGRVPYPGMVNREV 215
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 12/207 (5%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-ALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G+G FG V+ VA+K L+ G + + F E ++MK +RH L+++ + S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 240 NEEFKALVLEYMPHGSLEKYMYS-SNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E +V EYM GSL ++ + L + Q +++ +AS + Y+ +H D
Sbjct: 333 EEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 388
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGD 357
L+ +N+L+ +N+V ++DF +A+L+ ED T Q I + APE GR + D
Sbjct: 389 LRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 446
Query: 358 VYSFGIMLME-TFTGKKPTNEIFNGEM 383
V+SFGI+L E T G+ P + N E+
Sbjct: 447 VWSFGILLTELTTKGRVPYPGMVNREV 473
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 12/207 (5%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-ALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G+G FG V+ VA+K L+ G + + F E ++MK +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 240 NEEFKALVLEYMPHGSLEKYMYSS-NYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E +V EYM GSL ++ L + Q +++ +AS + Y+ +H D
Sbjct: 84 EEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGD 357
L+ +N+L+ +N+V ++DF +A+L+ ED T Q I + APE GR + D
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 358 VYSFGIMLME-TFTGKKPTNEIFNGEM 383
V+SFGI+L E T G+ P + N E+
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVNREV 224
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 12/207 (5%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-ALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G+G FG V+ VA+K L+ G + + F E ++MK +RH L+++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 240 NEEFKALVLEYMPHGSLEKYMY-SSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E +V EYM GSL ++ + L + Q +++ +AS + Y+ +H D
Sbjct: 81 EEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRD 136
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGD 357
L+ +N+L+ +N+V ++DF +A+L+ ED T Q I + APE GR + D
Sbjct: 137 LRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 358 VYSFGIMLME-TFTGKKPTNEIFNGEM 383
V+SFGI+L E T G+ P + N E+
Sbjct: 195 VWSFGILLTELTTKGRVPYPGMVNREV 221
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 12/207 (5%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-ALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G+G FG V+ VA+K L+ G + + F E ++MK +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 240 NEEFKALVLEYMPHGSLEKYMYSS-NYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E +V EYM GSL ++ L + Q +++ +AS + Y+ +H D
Sbjct: 84 EEPI-YIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGD 357
L+ +N+L+ +N+V ++DF +A+L+ ED T Q I + APE GR + D
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 358 VYSFGIMLME-TFTGKKPTNEIFNGEM 383
V+SFGI+L E T G+ P + N E+
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVNREV 224
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 132/291 (45%), Gaps = 30/291 (10%)
Query: 165 HLELCRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMK 224
H+EL R + +G G FG V + +VAVK+ + + F E + M
Sbjct: 2 HMELKREEITLLKE--LGSGQFGVVKLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMM 58
Query: 225 SIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALE 284
+ H L+K CS E +V EY+ +G L Y+ S L+ Q L + DV +
Sbjct: 59 KLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMA 118
Query: 285 YLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
+L S IH DL N L+D ++ +SDF + + + +DQ ++ T + + AP
Sbjct: 119 FLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVL-DDQYVSSVGTKFPVKWSAP 174
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGA 403
E + S+ DV++FGI++ E F+ GK P + N E+ LK
Sbjct: 175 EVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLK----------------- 217
Query: 404 NLLSQEDIHFVAKEQCVS-CVFNLAMECTVESPEQRINAREIVAKLLKIRD 453
+SQ H + + S ++ + C E PE+R +++++ + +R+
Sbjct: 218 --VSQG--HRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 36/289 (12%)
Query: 178 NNLIGRGGFGSVYKARL--GDGMEVAVKVFNLQCG---RALKGFDVECEMMKSIRHRNLI 232
+IG G G V RL +V V + L+ G R + F E +M H N+I
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 233 KVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL-HFGYS 291
++ + +V EYM +GSL+ ++ + + I Q + ++ V + + YL GY
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY- 172
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQTQTLATIGYMAPEYGREG 350
+H DL NVL+D N+V +SDF ++++L + D + T T I + APE
Sbjct: 173 ---VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFR 229
Query: 351 RVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
S+ DV+SFG+++ E G++P + N ++ IS++E E
Sbjct: 230 TFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV-----------ISSVE---------E 269
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRN 458
A C + L ++C + QR +IV+ L D+L+R+
Sbjct: 270 GYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL----DALIRS 314
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 12/207 (5%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-ALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G+G FG V+ VA+K L+ G + + F E ++MK +RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 240 NEEFKALVLEYMPHGSLEKYMY-SSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E +V EYM GSL ++ + L + Q +++ +AS + Y+ +H D
Sbjct: 250 EEPI-YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 305
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGD 357
L+ +N+L+ +N+V ++DF +A+L+ ED T Q I + APE GR + D
Sbjct: 306 LRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 358 VYSFGIMLME-TFTGKKPTNEIFNGEM 383
V+SFGI+L E T G+ P + N E+
Sbjct: 364 VWSFGILLTELTTKGRVPYPGMVNREV 390
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 36/289 (12%)
Query: 178 NNLIGRGGFGSVYKARL--GDGMEVAVKVFNLQCG---RALKGFDVECEMMKSIRHRNLI 232
+IG G G V RL +V V + L+ G R + F E +M H N+I
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 233 KVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL-HFGYS 291
++ + +V EYM +GSL+ ++ + + I Q + ++ V + + YL GY
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY- 172
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQTQTLATIGYMAPEYGREG 350
+H DL NVL+D N+V +SDF ++++L + D + T T I + APE
Sbjct: 173 ---VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFR 229
Query: 351 RVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
S+ DV+SFG+++ E G++P + N ++ IS++E E
Sbjct: 230 TFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV-----------ISSVE---------E 269
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRN 458
A C + L ++C + QR +IV+ L D+L+R+
Sbjct: 270 GYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL----DALIRS 314
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 134/281 (47%), Gaps = 28/281 (9%)
Query: 181 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCG--RALKGFDVECEMMKSIRHRNLIKVIST 237
IG G FG+VYK + GD VAVK+ N+ + L+ F E +++ RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
+ + A+V ++ SL +++ ++ + ++I A ++YLH + IIH
Sbjct: 73 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 128
Query: 298 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVST 354
DLK +N+ L +++ + DF +A + S Q +I +MAPE R + S
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 355 NGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFV 414
DVY+FGI+L E TG+ P + I N + + +VG LS D+ V
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQII-------------FMVGRGYLS-PDLSKV 234
Query: 415 AKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSL 455
+ C + L EC + ++R +I+A + + SL
Sbjct: 235 -RSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 274
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 131/274 (47%), Gaps = 28/274 (10%)
Query: 181 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCG--RALKGFDVECEMMKSIRHRNLIKVIST 237
IG G FG+VYK + GD VAVK+ N+ + L+ F E +++ RH N++ +
Sbjct: 36 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
+ + A+V ++ SL +++ ++ + ++I A ++YLH + IIH
Sbjct: 93 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 148
Query: 298 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVST 354
DLK +N+ L +++ + DF +A + S Q +I +MAPE R + S
Sbjct: 149 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 208
Query: 355 NGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFV 414
DVY+FGI+L E TG+ P + I N + + +VG LS D+ V
Sbjct: 209 QSDVYAFGIVLYELMTGQLPYSNINNRDQII-------------FMVGRGYLS-PDLSKV 254
Query: 415 AKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
+ C + L EC + ++R +I+A +
Sbjct: 255 -RSNCPKAMKRLMAECLKKKRDERPLFPQILASI 287
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 139/293 (47%), Gaps = 36/293 (12%)
Query: 176 SENNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RALKGFDVECEMMKSIRHRN 230
S + ++G G FG V RL E++V + L+ G + + F E +M H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL-HFG 289
+I++ + + +V EYM +GSL+ ++ + + Q + ++ +AS ++YL G
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 290 YSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ-TLATIGYMAPEYGR 348
+ +H DL N+L++ N+V +SDF ++++L + ++ T+ I + +PE
Sbjct: 168 F----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 349 EGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLS 407
+ ++ DV+S+GI+L E + G++P +W +S +V+ A
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERP------------YW-----EMSNQDVIKA---V 263
Query: 408 QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRNVG 460
E C + ++ L ++C + R +IV+ I D L+RN G
Sbjct: 264 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPG 312
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 108/207 (52%), Gaps = 12/207 (5%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-ALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G+G FG V+ VA+K L+ G + + F E ++MK +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 240 NEEFKALVLEYMPHGSLEKYMYSS-NYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E +V+EYM G L ++ L + Q +++ +AS + Y+ +H D
Sbjct: 84 EEPI-YIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGD 357
L+ +N+L+ +N+V ++DF +A+L+ ED T Q I + APE GR + D
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 358 VYSFGIMLME-TFTGKKPTNEIFNGEM 383
V+SFGI+L E T G+ P + N E+
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVNREV 224
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 131/274 (47%), Gaps = 28/274 (10%)
Query: 181 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCG--RALKGFDVECEMMKSIRHRNLIKVIST 237
IG G FG+VYK + GD VAVK+ N+ + L+ F E +++ RH N++ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
+ + A+V ++ SL +++ ++ + ++I A ++YLH + IIH
Sbjct: 101 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 156
Query: 298 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVST 354
DLK +N+ L +++ + DF +A + S Q +I +MAPE R + S
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 355 NGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFV 414
DVY+FGI+L E TG+ P + I N + + +VG LS D+ V
Sbjct: 217 QSDVYAFGIVLYELMTGQLPYSNINNRDQII-------------FMVGRGYLS-PDLSKV 262
Query: 415 AKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
+ C + L EC + ++R +I+A +
Sbjct: 263 -RSNCPKAMKRLMAECLKKKRDERPLFPQILASI 295
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 12/207 (5%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-ALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G+G FG V+ VA+K L+ G + + F E ++MK +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 240 NEEFKALVLEYMPHGSLEKYMYSS-NYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E +V EYM GSL ++ L + Q +++ +AS + Y+ +H D
Sbjct: 84 EEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGD 357
L +N+L+ +N+V ++DF +A+L+ ED T Q I + APE GR + D
Sbjct: 140 LAAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 358 VYSFGIMLME-TFTGKKPTNEIFNGEM 383
V+SFGI+L E T G+ P + N E+
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVNREV 224
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 12/207 (5%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-ALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G+G FG V+ VA+K L+ G + + F E ++MK +RH L+++ + S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 240 NEEFKALVLEYMPHGSLEKYMYSS-NYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E +V EYM GSL ++ L + Q +++ +AS + Y+ +H D
Sbjct: 251 EEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 306
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGD 357
L+ +N+L+ +N+V ++DF + +L+ ED T Q I + APE GR + D
Sbjct: 307 LRAANILVGENLVCKVADFGLGRLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 364
Query: 358 VYSFGIMLME-TFTGKKPTNEIFNGEM 383
V+SFGI+L E T G+ P + N E+
Sbjct: 365 VWSFGILLTELTTKGRVPYPGMVNREV 391
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 134/303 (44%), Gaps = 38/303 (12%)
Query: 162 TFSHLELCRATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALK---GFD 217
T SHL +D + ++G GG V+ AR L D +VAVKV R F
Sbjct: 6 TPSHL-----SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR 60
Query: 218 VECEMMKSIRHRNLIKVISTCSNE----EFKALVLEYMPHGSLEKYMYSSNYILDIFQRL 273
E + ++ H ++ V T E +V+EY+ +L +++ + +
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKR 117
Query: 274 NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 333
I + +A A + L+F + IIH D+KP+N+++ + DF IA+ + S+TQT
Sbjct: 118 AIEV-IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 334 QT-LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDW 392
+ T Y++PE R V DVYS G +L E TG+ P + +H D
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDP 236
Query: 393 LPISTMEVVGANLLSQEDIHFVAKEQCVSCVFN-LAMECTVESPEQRIN-AREIVAKLLK 450
+P S A+ + +S + + ++ ++PE R A E+ A L++
Sbjct: 237 IPPS------------------ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 278
Query: 451 IRD 453
+ +
Sbjct: 279 VHN 281
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 12/207 (5%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-ALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G+G FG V+ VA+K L+ G + + F E ++MK +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 240 NEEFKALVLEYMPHGSLEKYMYSS-NYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E +V EYM G L ++ L + Q +++ +AS + Y+ +H D
Sbjct: 84 EEPI-YIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGD 357
L+ +N+L+ +N+V ++DF +A+L+ ED T Q I + APE GR + D
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 358 VYSFGIMLME-TFTGKKPTNEIFNGEM 383
V+SFGI+L E T G+ P + N E+
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVNREV 224
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 138/294 (46%), Gaps = 36/294 (12%)
Query: 175 FSENNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RALKGFDVECEMMKSIRHR 229
S + ++G G FG V RL E++V + L+ G + + F E +M H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 230 NLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL-HF 288
N+I++ + + +V E M +GSL+ ++ + + Q + ++ +AS ++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ-TLATIGYMAPEYG 347
GY +H DL N+L++ N+V +SDF ++++L + ++ T+ I + +PE
Sbjct: 167 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 348 REGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLL 406
+ ++ DV+S+GI+L E + G++P +W +S +V+ A
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERP------------YW-----EMSNQDVIKA--- 262
Query: 407 SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRNVG 460
E C + ++ L ++C + R +IV+ I D L+RN G
Sbjct: 263 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPG 312
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 138/294 (46%), Gaps = 36/294 (12%)
Query: 175 FSENNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RALKGFDVECEMMKSIRHR 229
S + ++G G FG V RL E++V + L+ G + + F E +M H
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 230 NLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL-HF 288
N+I++ + + +V E M +GSL+ ++ + + Q + ++ +AS ++YL
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 137
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ-TLATIGYMAPEYG 347
GY +H DL N+L++ N+V +SDF ++++L + ++ T+ I + +PE
Sbjct: 138 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 348 REGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLL 406
+ ++ DV+S+GI+L E + G++P +W +S +V+ A
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMSYGERP------------YW-----EMSNQDVIKA--- 233
Query: 407 SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRNVG 460
E C + ++ L ++C + R +IV+ I D L+RN G
Sbjct: 234 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPG 283
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 137/307 (44%), Gaps = 46/307 (14%)
Query: 162 TFSHLELCRATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALK---GFD 217
T SHL +D + ++G GG V+ AR L D +VAVKV R F
Sbjct: 6 TPSHL-----SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR 60
Query: 218 VECEMMKSIRHRNLIKVISTCSNE----EFKALVLEYMPHGSLEKYMYSSNYILDIFQRL 273
E + ++ H ++ V T E +V+EY+ +L +++ + +
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKR 117
Query: 274 NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 333
I + +A A + L+F + IIH D+KP+N+++ + DF IA+ + S+TQT
Sbjct: 118 AIEV-IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 334 QT-LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGE----MTLKHW 388
+ T Y++PE R V DVYS G +L E TG+ P F G+ + +H
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHV 232
Query: 389 VNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFN-LAMECTVESPEQRIN-AREIVA 446
D +P S A+ + +S + + ++ ++PE R A E+ A
Sbjct: 233 REDPIPPS------------------ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 274
Query: 447 KLLKIRD 453
L+++ +
Sbjct: 275 DLVRVHN 281
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 178 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCGRALKGFDVECEMMKSIRHRNLI 232
N +IGRG FG VY L G + AVK N + + F E +MK H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 233 KVISTCSNEEFKALV-LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
++ C E LV L YM HG L ++ + + + + + VA ++YL S
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 150
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLAT--IGYMAPEYGRE 349
+H DL N +LD+ ++DF +A+ + ++ +T A + +MA E +
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQT 210
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
+ +T DV+SFG++L E T P N I+ + G LL
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----------FDITVYLLQGRRLLQ-- 257
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL 456
E C ++ + ++C E R + E+V+++ I + +
Sbjct: 258 ------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 298
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 178 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCGRALKGFDVECEMMKSIRHRNLI 232
N +IGRG FG VY L G + AVK N + + F E +MK H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 233 KVISTCSNEEFKALV-LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
++ C E LV L YM HG L ++ + + + + + VA ++YL S
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 149
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLAT--IGYMAPEYGRE 349
+H DL N +LD+ ++DF +A+ + ++ +T A + +MA E +
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 209
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
+ +T DV+SFG++L E T P N I+ + G LL
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----------FDITVYLLQGRRLLQ-- 256
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL 456
E C ++ + ++C E R + E+V+++ I + +
Sbjct: 257 ------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 297
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 178 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCGRALKGFDVECEMMKSIRHRNLI 232
N +IGRG FG VY L G + AVK N + + F E +MK H N++
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 233 KVISTCSNEEFKALV-LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
++ C E LV L YM HG L ++ + + + + + VA ++YL S
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 146
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLAT--IGYMAPEYGRE 349
+H DL N +LD+ ++DF +A+ + ++ +T A + +MA E +
Sbjct: 147 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 206
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
+ +T DV+SFG++L E T P N I+ + G LL
Sbjct: 207 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----------FDITVYLLQGRRLLQ-- 253
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL 456
E C ++ + ++C E R + E+V+++ I + +
Sbjct: 254 ------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 178 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCGRALKGFDVECEMMKSIRHRNLI 232
N +IGRG FG VY L G + AVK N + + F E +MK H N++
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 233 KVISTCSNEEFKALV-LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
++ C E LV L YM HG L ++ + + + + + VA ++YL S
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 143
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLAT--IGYMAPEYGRE 349
+H DL N +LD+ ++DF +A+ + ++ +T A + +MA E +
Sbjct: 144 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 203
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
+ +T DV+SFG++L E T P N I+ + G LL
Sbjct: 204 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----------FDITVYLLQGRRLLQ-- 250
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL 456
E C ++ + ++C E R + E+V+++ I + +
Sbjct: 251 ------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 291
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 131/284 (46%), Gaps = 42/284 (14%)
Query: 181 IGRGGFGSVYKARL-GDGMEVAVKVFNL-------QCGRALKGFDVECEMMKSIRHRNLI 232
IG+GGFG V+K RL D VA+K L + + F E +M ++ H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 233 KVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
K+ N +V+E++P G L + + + +L +M+D+A +EY+ +
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNP 143
Query: 293 PIIHCDLKPSNVL---LDDN--MVAHLSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEY 346
PI+H DL+ N+ LD+N + A ++DFS+++ QS+ + + L +MAPE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ------QSVHSVSGLLGNFQWMAPET 197
Query: 347 --GREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN 404
E + D YSF ++L TG+ P +E G++ N
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF-----------------IN 240
Query: 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
++ +E + E C + N+ C P++R + IV +L
Sbjct: 241 MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 178 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCGRALKGFDVECEMMKSIRHRNLI 232
N +IGRG FG VY L G + AVK N + + F E +MK H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 233 KVISTCSNEEFKALV-LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
++ C E LV L YM HG L ++ + + + + + VA ++YL S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 151
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLAT--IGYMAPEYGRE 349
+H DL N +LD+ ++DF +A+ + ++ +T A + +MA E +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
+ +T DV+SFG++L E T P N I+ + G LL
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----------FDITVYLLQGRRLLQ-- 258
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL 456
E C ++ + ++C E R + E+V+++ I + +
Sbjct: 259 ------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 94/203 (46%), Gaps = 11/203 (5%)
Query: 178 NNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
++GRG FG V KA+ +VA+K + R K F VE + + H N++K+
Sbjct: 14 EEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGA 70
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYI--LDIFQRLNIMIDVASALEYLHFGYSAPII 295
C N LV+EY GSL ++ + + ++ + + + YLH +I
Sbjct: 71 CLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 128
Query: 296 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTN 355
H DLKP N+LL VA + I T D T + +MAPE S
Sbjct: 129 HRDLKPPNLLL----VAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEK 184
Query: 356 GDVYSFGIMLMETFTGKKPTNEI 378
DV+S+GI+L E T +KP +EI
Sbjct: 185 CDVFSWGIILWEVITRRKPFDEI 207
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 113/249 (45%), Gaps = 26/249 (10%)
Query: 162 TFSHLELCRATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALK---GFD 217
T SHL +D + ++G GG V+ AR L D +VAVKV R F
Sbjct: 6 TPSHL-----SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR 60
Query: 218 VECEMMKSIRHRNLIKVISTCSNE----EFKALVLEYMPHGSLEKYMYSSNYILDIFQRL 273
E + ++ H ++ V T E +V+EY+ +L +++ + +
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKR 117
Query: 274 NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 333
I + +A A + L+F + IIH D+KP+N+L+ + DF IA+ + S+ QT
Sbjct: 118 AIEV-IADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQT 176
Query: 334 QT-LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGE----MTLKHW 388
+ T Y++PE R V DVYS G +L E TG+ P F G+ + +H
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHV 232
Query: 389 VNDWLPIST 397
D +P S
Sbjct: 233 REDPIPPSA 241
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 94/203 (46%), Gaps = 11/203 (5%)
Query: 178 NNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
++GRG FG V KA+ +VA+K + R K F VE + + H N++K+
Sbjct: 13 EEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGA 69
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYI--LDIFQRLNIMIDVASALEYLHFGYSAPII 295
C N LV+EY GSL ++ + + ++ + + + YLH +I
Sbjct: 70 CLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127
Query: 296 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTN 355
H DLKP N+LL VA + I T D T + +MAPE S
Sbjct: 128 HRDLKPPNLLL----VAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEK 183
Query: 356 GDVYSFGIMLMETFTGKKPTNEI 378
DV+S+GI+L E T +KP +EI
Sbjct: 184 CDVFSWGIILWEVITRRKPFDEI 206
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 178 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCGRALKGFDVECEMMKSIRHRNLI 232
N +IGRG FG VY L G + AVK N + + F E +MK H N++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 233 KVISTCSNEEFKALV-LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
++ C E LV L YM HG L ++ + + + + + VA ++YL S
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 148
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLAT--IGYMAPEYGRE 349
+H DL N +LD+ ++DF +A+ + ++ +T A + +MA E +
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 208
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
+ +T DV+SFG++L E T P N I+ + G LL
Sbjct: 209 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----------FDITVYLLQGRRLLQ-- 255
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL 456
E C ++ + ++C E R + E+V+++ I + +
Sbjct: 256 ------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 296
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 178 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCGRALKGFDVECEMMKSIRHRNLI 232
N +IGRG FG VY L G + AVK N + + F E +MK H N++
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 233 KVISTCSNEEFKALV-LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
++ C E LV L YM HG L ++ + + + + + VA ++YL S
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 170
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLAT--IGYMAPEYGRE 349
+H DL N +LD+ ++DF +A+ + ++ +T A + +MA E +
Sbjct: 171 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 230
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
+ +T DV+SFG++L E T P N I+ + G LL
Sbjct: 231 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----------FDITVYLLQGRRLLQ-- 277
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL 456
E C ++ + ++C E R + E+V+++ I + +
Sbjct: 278 ------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 318
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 178 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCGRALKGFDVECEMMKSIRHRNLI 232
N +IGRG FG VY L G + AVK N + + F E +MK H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 233 KVISTCSNEEFKALV-LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
++ C E LV L YM HG L ++ + + + + + VA ++YL S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 151
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLAT--IGYMAPEYGRE 349
+H DL N +LD+ ++DF +A+ + ++ +T A + +MA E +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
+ +T DV+SFG++L E T P N I+ + G LL
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----------FDITVYLLQGRRLLQ-- 258
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL 456
E C ++ + ++C E R + E+V+++ I + +
Sbjct: 259 ------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 178 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCGRALKGFDVECEMMKSIRHRNLI 232
N +IGRG FG VY L G + AVK N + + F E +MK H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 233 KVISTCSNEEFKALV-LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
++ C E LV L YM HG L ++ + + + + + VA ++YL S
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 150
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLAT--IGYMAPEYGRE 349
+H DL N +LD+ ++DF +A+ + ++ +T A + +MA E +
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 210
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
+ +T DV+SFG++L E T P N I+ + G LL
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----------FDITVYLLQGRRLLQ-- 257
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL 456
E C ++ + ++C E R + E+V+++ I + +
Sbjct: 258 ------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 298
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 178 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCGRALKGFDVECEMMKSIRHRNLI 232
N +IGRG FG VY L G + AVK N + + F E +MK H N++
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 233 KVISTCSNEEFKALV-LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
++ C E LV L YM HG L ++ + + + + + VA ++YL S
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 169
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLAT--IGYMAPEYGRE 349
+H DL N +LD+ ++DF +A+ + ++ +T A + +MA E +
Sbjct: 170 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 229
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
+ +T DV+SFG++L E T P N I+ + G LL
Sbjct: 230 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----------FDITVYLLQGRRLLQ-- 276
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL 456
E C ++ + ++C E R + E+V+++ I + +
Sbjct: 277 ------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 317
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 136/293 (46%), Gaps = 34/293 (11%)
Query: 175 FSENNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RALKGFDVECEMMKSIRHR 229
S + ++G G FG V RL E++V + L+ G + + F E +M H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 230 NLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFG 289
N+I++ + + +V E M +GSL+ ++ + + Q + ++ +AS ++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS-- 164
Query: 290 YSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ-TLATIGYMAPEYGR 348
+H DL N+L++ N+V +SDF ++++L + ++ T+ I + +PE
Sbjct: 165 -DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 349 EGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLS 407
+ ++ DV+S+GI+L E + G++P +W +S +V+ A
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERP------------YW-----EMSNQDVIKA---V 263
Query: 408 QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRNVG 460
E C + ++ L ++C + R +IV+ I D L+RN G
Sbjct: 264 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPG 312
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 30/261 (11%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
+G G FG V+ +VAVK Q + F E +MK ++H+ L+++ + +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
E ++ EYM +GSL ++ + + I L I + L++ +A + ++ IH DL
Sbjct: 82 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 137
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDV 358
+ +N+L+ D + ++DF +A+L+ ED T + I + APE G + DV
Sbjct: 138 RAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 195
Query: 359 YSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKE 417
+SFGI+L E T G+ P + N E V NL + V +
Sbjct: 196 WSFGILLTEIVTHGRIPYPGMTNPE------------------VIQNL--ERGYRMVRPD 235
Query: 418 QCVSCVFNLAMECTVESPEQR 438
C ++ L C E PE R
Sbjct: 236 NCPEELYQLMRLCWKERPEDR 256
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 119/261 (45%), Gaps = 30/261 (11%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
+G G FG V+ +VAVK Q + F E +MK ++H+ L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
E ++ EYM +GSL ++ + + I L I + L++ +A + ++ IH DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 135
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDV 358
+ +N+L+ D + ++DF +A+L+ ED T + I + APE G + DV
Sbjct: 136 RAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 359 YSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKE 417
+SFGI+L E T G+ P + N E+ I +E V +
Sbjct: 194 WSFGILLTEIVTHGRIPYPGMTNPEV-----------IQNLE---------RGYRMVRPD 233
Query: 418 QCVSCVFNLAMECTVESPEQR 438
C ++ L C E PE R
Sbjct: 234 NCPEELYQLMRLCWKERPEDR 254
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 30/261 (11%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
+G G FG V+ +VAVK Q + F E +MK ++H+ L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
E ++ EYM +GSL ++ + + I L I + L++ +A + ++ IH DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 135
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDV 358
+ +N+L+ D + ++DF +A+L+ ED T + I + APE G + DV
Sbjct: 136 RAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 359 YSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKE 417
+SFGI+L E T G+ P + N E V NL + V +
Sbjct: 194 WSFGILLTEIVTHGRIPYPGMTNPE------------------VIQNL--ERGYRMVRPD 233
Query: 418 QCVSCVFNLAMECTVESPEQR 438
C ++ L C E PE R
Sbjct: 234 NCPEELYQLMRLCWKERPEDR 254
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 30/261 (11%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
+G G FG V+ +VAVK Q + F E +MK ++H+ L+++ + +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
E ++ EYM +GSL ++ + + I L I + L++ +A + ++ IH DL
Sbjct: 81 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 136
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDV 358
+ +N+L+ D + ++DF +A+L+ ED T + I + APE G + DV
Sbjct: 137 RAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 194
Query: 359 YSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKE 417
+SFGI+L E T G+ P + N E V NL + V +
Sbjct: 195 WSFGILLTEIVTHGRIPYPGMTNPE------------------VIQNL--ERGYRMVRPD 234
Query: 418 QCVSCVFNLAMECTVESPEQR 438
C ++ L C E PE R
Sbjct: 235 NCPEELYQLMRLCWKERPEDR 255
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 30/261 (11%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
+G G FG V+ +VAVK Q + F E +MK ++H+ L+++ + +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
E ++ EYM +GSL ++ + + I L I + L++ +A + ++ IH DL
Sbjct: 89 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 144
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDV 358
+ +N+L+ D + ++DF +A+L+ ED T + I + APE G + DV
Sbjct: 145 RAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 202
Query: 359 YSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKE 417
+SFGI+L E T G+ P + N E V NL + V +
Sbjct: 203 WSFGILLTEIVTHGRIPYPGMTNPE------------------VIQNL--ERGYRMVRPD 242
Query: 418 QCVSCVFNLAMECTVESPEQR 438
C ++ L C E PE R
Sbjct: 243 NCPEELYQLMRLCWKERPEDR 263
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 30/261 (11%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
+G G FG V+ +VAVK Q + F E +MK ++H+ L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
E ++ EYM +GSL ++ + + I L I + L++ +A + ++ IH DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 135
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDV 358
+ +N+L+ D + ++DF +A+L+ ED T + I + APE G + DV
Sbjct: 136 RAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 359 YSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKE 417
+SFGI+L E T G+ P + N E V NL + V +
Sbjct: 194 WSFGILLTEIVTHGRIPYPGMTNPE------------------VIQNL--ERGYRMVRPD 233
Query: 418 QCVSCVFNLAMECTVESPEQR 438
C ++ L C E PE R
Sbjct: 234 NCPEELYQLMRLCWKERPEDR 254
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 119/261 (45%), Gaps = 30/261 (11%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
+G G FG V+ +VAVK Q + F E +MK ++H+ L+++ + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
E ++ EYM +GSL ++ + + I L I + L++ +A + ++ IH DL
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 141
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDV 358
+ +N+L+ D + ++DF +A+L+ ED T + I + APE G + DV
Sbjct: 142 RAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 199
Query: 359 YSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKE 417
+SFGI+L E T G+ P + N E+ I +E V +
Sbjct: 200 WSFGILLTEIVTHGRIPYPGMTNPEV-----------IQNLE---------RGYRMVRPD 239
Query: 418 QCVSCVFNLAMECTVESPEQR 438
C ++ L C E PE R
Sbjct: 240 NCPEELYQLMRLCWKERPEDR 260
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 119/261 (45%), Gaps = 30/261 (11%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
+G G FG V+ +VAVK Q + F E +MK ++H+ L+++ + +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
E ++ EYM +GSL ++ + + I L I + L++ +A + ++ IH DL
Sbjct: 88 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 143
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDV 358
+ +N+L+ D + ++DF +A+L+ ED T + I + APE G + DV
Sbjct: 144 RAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 201
Query: 359 YSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKE 417
+SFGI+L E T G+ P + N E+ I +E V +
Sbjct: 202 WSFGILLTEIVTHGRIPYPGMTNPEV-----------IQNLE---------RGYRMVRPD 241
Query: 418 QCVSCVFNLAMECTVESPEQR 438
C ++ L C E PE R
Sbjct: 242 NCPEELYQLMRLCWKERPEDR 262
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 30/261 (11%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
+G G FG V+ +VAVK Q + F E +MK ++H+ L+++ + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
E ++ EYM +GSL ++ + + I L I + L++ +A + ++ IH DL
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 141
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDV 358
+ +N+L+ D + ++DF +A+L+ ED T + I + APE G + DV
Sbjct: 142 RAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 199
Query: 359 YSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKE 417
+SFGI+L E T G+ P + N E V NL + V +
Sbjct: 200 WSFGILLTEIVTHGRIPYPGMTNPE------------------VIQNL--ERGYRMVRPD 239
Query: 418 QCVSCVFNLAMECTVESPEQR 438
C ++ L C E PE R
Sbjct: 240 NCPEELYQLMRLCWKERPEDR 260
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 30/261 (11%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
+G G FG V+ +VAVK Q + F E +MK ++H+ L+++ + +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
E ++ EYM +GSL ++ + + I L I + L++ +A + ++ IH DL
Sbjct: 85 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 140
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDV 358
+ +N+L+ D + ++DF +A+L+ ED T + I + APE G + DV
Sbjct: 141 RAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 198
Query: 359 YSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKE 417
+SFGI+L E T G+ P + N E V NL + V +
Sbjct: 199 WSFGILLTEIVTHGRIPYPGMTNPE------------------VIQNL--ERGYRMVRPD 238
Query: 418 QCVSCVFNLAMECTVESPEQR 438
C ++ L C E PE R
Sbjct: 239 NCPEELYQLMRLCWKERPEDR 259
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 123/261 (47%), Gaps = 30/261 (11%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
+G G FG V+ A +VAVK +++ F E +MK+++H L+K+ + +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 81
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL-EYLHFGYSAPIIHCDL 299
E ++ E+M GSL ++ S Q L +ID ++ + E + F IH DL
Sbjct: 82 EPI-YIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 137
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDV 358
+ +N+L+ ++V ++DF +A+++ ED T + I + APE G + DV
Sbjct: 138 RAANILVSASLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDV 195
Query: 359 YSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKE 417
+SFGI+LME T G+ P + G +S EV+ A + E
Sbjct: 196 WSFGILLMEIVTYGRIP----YPG-------------MSNPEVIRA---LERGYRMPRPE 235
Query: 418 QCVSCVFNLAMECTVESPEQR 438
C ++N+ M C PE+R
Sbjct: 236 NCPEELYNIMMRCWKNRPEER 256
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 133/288 (46%), Gaps = 36/288 (12%)
Query: 180 LIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RALKGFDVECEMMKSIRHRNLIKV 234
+IG G FG V + RL E V + L+ G R + F E +M H N+I++
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPI 294
+N ++ E+M +G+L+ ++ ++ + Q + ++ +AS + YL
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA---EMSY 139
Query: 295 IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA---TIGYMAPEYGREGR 351
+H DL N+L++ N+V +SDF +++ L T+T +L I + APE +
Sbjct: 140 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRK 199
Query: 352 VSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQED 410
++ D +S+GI++ E + G++P +W +S +V+ A ++D
Sbjct: 200 FTSASDAWSYGIVMWEVMSFGERP------------YW-----DMSNQDVINA---IEQD 239
Query: 411 IHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRN 458
C + + L ++C ++ NAR +++ D ++RN
Sbjct: 240 YRLPPPPDCPTSLHQLMLDCW----QKDRNARPRFPQVVSALDKMIRN 283
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 126/283 (44%), Gaps = 40/283 (14%)
Query: 181 IGRGGFGSVYKARL-GDGMEVAVKVFNL-------QCGRALKGFDVECEMMKSIRHRNLI 232
IG+GGFG V+K RL D VA+K L + + F E +M ++ H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 233 KVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
K+ N +V+E++P G L + + + +L +M+D+A +EY+ +
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNP 143
Query: 293 PIIHCDLKPSNVL---LDDN--MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY- 346
PI+H DL+ N+ LD+N + A ++DF T + + + L +MAPE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFG-----TSQQSVHSVSGLLGNFQWMAPETI 198
Query: 347 -GREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405
E + D YSF ++L TG+ P +E G++ N+
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF-----------------INM 241
Query: 406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
+ +E + E C + N+ C P++R + IV +L
Sbjct: 242 IREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 178 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCGRALKGFDVECEMMKSIRHRNLI 232
N +IGRG FG VY L G + AVK N + + F E +MK H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 233 KVISTCSNEEFKALV-LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
++ C E LV L YM HG L ++ + + + + + VA +++L S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 151
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLAT--IGYMAPEYGRE 349
+H DL N +LD+ ++DF +A+ + ++ +T A + +MA E +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
+ +T DV+SFG++L E T P N I+ + G LL
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----------FDITVYLLQGRRLLQ-- 258
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL 456
E C ++ + ++C E R + E+V+++ I + +
Sbjct: 259 ------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 130/284 (45%), Gaps = 42/284 (14%)
Query: 181 IGRGGFGSVYKARL-GDGMEVAVKVFNL-------QCGRALKGFDVECEMMKSIRHRNLI 232
IG+GGFG V+K RL D VA+K L + + F E +M ++ H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 233 KVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
K+ N +V+E++P G L + + + +L +M+D+A +EY+ +
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNP 143
Query: 293 PIIHCDLKPSNVL---LDDN--MVAHLSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEY 346
PI+H DL+ N+ LD+N + A ++DF +++ QS+ + + L +MAPE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ------QSVHSVSGLLGNFQWMAPET 197
Query: 347 --GREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN 404
E + D YSF ++L TG+ P +E G++ N
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF-----------------IN 240
Query: 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
++ +E + E C + N+ C P++R + IV +L
Sbjct: 241 MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 119/261 (45%), Gaps = 30/261 (11%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
+G G FG V+ +VAVK Q + F E +MK ++H+ L+++ + +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
E ++ EYM +GSL ++ + + I L I + L++ +A + ++ IH DL
Sbjct: 90 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 145
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDV 358
+ +N+L+ D + ++DF +A+L+ ED T + I + APE G + DV
Sbjct: 146 RAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 203
Query: 359 YSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKE 417
+SFGI+L E T G+ P + N E+ I +E V +
Sbjct: 204 WSFGILLTEIVTHGRIPYPGMTNPEV-----------IQNLE---------RGYRMVRPD 243
Query: 418 QCVSCVFNLAMECTVESPEQR 438
C ++ L C E PE R
Sbjct: 244 NCPEELYQLMRLCWKERPEDR 264
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 178 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCGRALKGFDVECEMMKSIRHRNLI 232
N +IGRG FG VY L G + AVK N + + F E +MK H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 233 KVISTCSNEEFKALV-LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
++ C E LV L YM HG L ++ + + + + + VA +++L S
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 152
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLAT--IGYMAPEYGRE 349
+H DL N +LD+ ++DF +A+ + ++ +T A + +MA E +
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
+ +T DV+SFG++L E T P N I+ + G LL
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----------FDITVYLLQGRRLLQ-- 259
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL 456
E C ++ + ++C E R + E+V+++ I + +
Sbjct: 260 ------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 300
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 178 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCGRALKGFDVECEMMKSIRHRNLI 232
N +IGRG FG VY L G + AVK N + + F E +MK H N++
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 233 KVISTCSNEEFKALV-LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
++ C E LV L YM HG L ++ + + + + + VA +++L S
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 156
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLAT--IGYMAPEYGRE 349
+H DL N +LD+ ++DF +A+ + ++ +T A + +MA E +
Sbjct: 157 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 216
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
+ +T DV+SFG++L E T P N I+ + G LL
Sbjct: 217 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----------FDITVYLLQGRRLLQ-- 263
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL 456
E C ++ + ++C E R + E+V+++ I + +
Sbjct: 264 ------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 304
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 178 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCGRALKGFDVECEMMKSIRHRNLI 232
N +IGRG FG VY L G + AVK N + + F E +MK H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 233 KVISTCSNEEFKALV-LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
++ C E LV L YM HG L ++ + + + + + VA +++L S
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 149
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLAT--IGYMAPEYGRE 349
+H DL N +LD+ ++DF +A+ + ++ +T A + +MA E +
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 209
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
+ +T DV+SFG++L E T P N I+ + G LL
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----------FDITVYLLQGRRLLQ-- 256
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL 456
E C ++ + ++C E R + E+V+++ I + +
Sbjct: 257 ------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 297
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 30/261 (11%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
+G G FG V+ +VAVK Q + F E +MK ++H+ L+++ + +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
E ++ EYM +GSL ++ + + I L I + L++ +A + ++ IH DL
Sbjct: 75 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 130
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDV 358
+ +N+L+ D + ++DF +A+L+ ED T + I + APE G + DV
Sbjct: 131 RAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 188
Query: 359 YSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKE 417
+SFGI+L E T G+ P + N E V NL + V +
Sbjct: 189 WSFGILLTEIVTHGRIPYPGMTNPE------------------VIQNL--ERGYRMVRPD 228
Query: 418 QCVSCVFNLAMECTVESPEQR 438
C ++ L C E PE R
Sbjct: 229 NCPEELYQLMRLCWKERPEDR 249
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 178 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCGRALKGFDVECEMMKSIRHRNLI 232
N +IGRG FG VY L G + AVK N + + F E +MK H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 233 KVISTCSNEEFKALV-LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
++ C E LV L YM HG L ++ + + + + + VA +++L S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 151
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLAT--IGYMAPEYGRE 349
+H DL N +LD+ ++DF +A+ + ++ +T A + +MA E +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
+ +T DV+SFG++L E T P N I+ + G LL
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----------FDITVYLLQGRRLLQ-- 258
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL 456
E C ++ + ++C E R + E+V+++ I + +
Sbjct: 259 ------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 178 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCGRALKGFDVECEMMKSIRHRNLI 232
N +IGRG FG VY L G + AVK N + + F E +MK H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 233 KVISTCSNEEFKALV-LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
++ C E LV L YM HG L ++ + + + + + VA +++L S
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 152
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLAT--IGYMAPEYGRE 349
+H DL N +LD+ ++DF +A+ + ++ +T A + +MA E +
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
+ +T DV+SFG++L E T P N I+ + G LL
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----------FDITVYLLQGRRLLQ-- 259
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL 456
E C ++ + ++C E R + E+V+++ I + +
Sbjct: 260 ------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 300
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 116/243 (47%), Gaps = 25/243 (10%)
Query: 148 PSNDANMPSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKA-RLGDG----MEVAV 202
PS A P+ A R EL R ++G G FG+VYK + +G + VA+
Sbjct: 22 PSGTA--PNQAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAI 72
Query: 203 KVFNLQCG-RALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMY 261
K+ N G +A F E +M S+ H +L++++ C + + LV + MPHG L +Y++
Sbjct: 73 KILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVH 131
Query: 262 SSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAK 321
+ LN + +A + YL ++H DL NVL+ ++DF +A+
Sbjct: 132 EHKDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLAR 188
Query: 322 LLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLME--TFTGKK----PT 375
LL G+++ I +MA E + + DV+S+G+ + E TF GK PT
Sbjct: 189 LLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT 248
Query: 376 NEI 378
EI
Sbjct: 249 REI 251
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 178 NNLIGRGGFGSVYKARL----GDGMEVAVKVFN-LQCGRALKGFDVECEMMKSIRHRNLI 232
N +IGRG FG VY L G + AVK N + + F E +MK H N++
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 233 KVISTCSNEEFKALV-LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
++ C E LV L YM HG L ++ + + + + + VA +++L S
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 210
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLAT--IGYMAPEYGRE 349
+H DL N +LD+ ++DF +A+ + ++ +T A + +MA E +
Sbjct: 211 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 270
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
+ +T DV+SFG++L E T P N I+ + G LL
Sbjct: 271 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----------FDITVYLLQGRRLLQ-- 317
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL 456
E C ++ + ++C E R + E+V+++ I + +
Sbjct: 318 ------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 140/287 (48%), Gaps = 36/287 (12%)
Query: 180 LIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RALKGFDVECEMMKSIRHRNLIKV 234
+IG G FG V RL E+ V + L+ G + + F E +M H N+I +
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL-HFGYSAP 293
+ + +V EYM +GSL+ ++ ++ + Q + ++ +++ ++YL GY
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGY--- 145
Query: 294 IIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ-TLATIGYMAPEYGREGRV 352
+H DL N+L++ N+V +SDF ++++L + ++ T+ I + APE +
Sbjct: 146 -VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKF 204
Query: 353 STNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDI 411
++ DV+S+GI++ E + G++P E+ N ++ I +E G L S D
Sbjct: 205 TSASDVWSYGIVMWEVVSYGERPYWEMTNQDV-----------IKAVE-EGYRLPSPMD- 251
Query: 412 HFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRN 458
C + ++ L ++C ++ N+R +++ + D L+RN
Sbjct: 252 -------CPAALYQLMLDCW----QKERNSRPKFDEIVNMLDKLIRN 287
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 114/249 (45%), Gaps = 26/249 (10%)
Query: 162 TFSHLELCRATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALK---GFD 217
T SHL +D + ++G GG V+ AR L +VAVKV R F
Sbjct: 6 TPSHL-----SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR 60
Query: 218 VECEMMKSIRHRNLIKVISTCSNE----EFKALVLEYMPHGSLEKYMYSSNYILDIFQRL 273
E + ++ H ++ V +T E +V+EY+ +L +++ + +
Sbjct: 61 REAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKR 117
Query: 274 NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 333
I + +A A + L+F + IIH D+KP+N+++ + DF IA+ + S+TQT
Sbjct: 118 AIEV-IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 334 QT-LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGE----MTLKHW 388
+ T Y++PE R V DVYS G +L E TG+ P F G+ + +H
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHV 232
Query: 389 VNDWLPIST 397
D +P S
Sbjct: 233 REDPIPPSA 241
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 121/261 (46%), Gaps = 30/261 (11%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
+G G FG V+ A +VAVK +++ F E +MK+++H L+K+ + +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 254
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL-EYLHFGYSAPIIHCDL 299
E ++ E+M GSL ++ S Q L +ID ++ + E + F IH DL
Sbjct: 255 EPI-YIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 310
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDV 358
+ +N+L+ ++V ++DF +A+++ ED T + I + APE G + DV
Sbjct: 311 RAANILVSASLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDV 368
Query: 359 YSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKE 417
+SFGI+LME T G+ P + N E+ I +E E
Sbjct: 369 WSFGILLMEIVTYGRIPYPGMSNPEV-----------IRALE---------RGYRMPRPE 408
Query: 418 QCVSCVFNLAMECTVESPEQR 438
C ++N+ M C PE+R
Sbjct: 409 NCPEELYNIMMRCWKNRPEER 429
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 138/289 (47%), Gaps = 36/289 (12%)
Query: 178 NNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RALKGFDVECEMMKSIRHRNLI 232
+IG G FG V RL +VAV + L+ G + + F E +M H N++
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 233 KVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL-HFGYS 291
+ + + +V+E+M +G+L+ ++ + + Q + ++ +A+ + YL GY
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGY- 166
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEYGREG 350
+H DL N+L++ N+V +SDF +++++ + +++ T T + + APE +
Sbjct: 167 ---VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYR 223
Query: 351 RVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
+ ++ DV+S+GI++ E + G++P +W +S +V+ A +E
Sbjct: 224 KFTSASDVWSYGIVMWEVMSYGERP------------YW-----DMSNQDVIKA---IEE 263
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRN 458
A C + + L ++C + +R +IV I D ++RN
Sbjct: 264 GYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVG----ILDKMIRN 308
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 132/288 (45%), Gaps = 36/288 (12%)
Query: 180 LIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RALKGFDVECEMMKSIRHRNLIKV 234
+IG G FG V + RL E V + L+ G R + F E +M H N+I++
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPI 294
+N ++ E+M +G+L+ ++ ++ + Q + ++ +AS + YL
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA---EMSY 137
Query: 295 IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA---TIGYMAPEYGREGR 351
+H DL N+L++ N+V +SDF +++ L T T +L I + APE +
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRK 197
Query: 352 VSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQED 410
++ D +S+GI++ E + G++P +W +S +V+ A ++D
Sbjct: 198 FTSASDAWSYGIVMWEVMSFGERP------------YW-----DMSNQDVINA---IEQD 237
Query: 411 IHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRN 458
C + + L ++C ++ NAR +++ D ++RN
Sbjct: 238 YRLPPPPDCPTSLHQLMLDCW----QKDRNARPRFPQVVSALDKMIRN 281
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 130/282 (46%), Gaps = 41/282 (14%)
Query: 175 FSENNLIGRGGFGSVYKARL----GDGMEVAVKVF--NLQCGRALKGFDVECEMMKSIRH 228
F+ ++G+G FGSV +A+L G ++VAVK+ ++ ++ F E MK H
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 229 RNLIKVISTCSNEEFKA------LVLEYMPHGSLEKYMYSSN-----YILDIFQRLNIMI 277
++ K++ K ++L +M HG L ++ +S + L + + M+
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV 144
Query: 278 DVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA 337
D+A +EYL S IH DL N +L ++M ++DF +++ + D +
Sbjct: 145 DIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL 201
Query: 338 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPIS 396
+ ++A E + + + DV++FG+ + E T G+ P I N E + ++L
Sbjct: 202 PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE------IYNYL--- 252
Query: 397 TMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQR 438
+G N L Q +C+ V++L +C P+QR
Sbjct: 253 ----IGGNRLKQ-------PPECMEEVYDLMYQCWSADPKQR 283
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 181 IGRGGFGSVY-----KARLGDGMEVAVKVFNLQCGRALK-GFDVECEMMKSIRHRNLIKV 234
+G G FG V G G VAVK CG L+ G+ E E+++++ H +++K
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 235 ISTCSNEEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
C ++ K+ LV+EY+P GSL Y+ + + + Q L + + YLH +
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLAQLLLFAQQICEGMAYLH---AQ 131
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL-TGEDQSMTQTQTLATIGYMAPEYGREGR 351
IH L NVLLD++ + + DF +AK + G + + + + + APE +E +
Sbjct: 132 HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECK 191
Query: 352 VSTNGDVYSFGIMLMETFT 370
DV+SFG+ L E T
Sbjct: 192 FYYASDVWSFGVTLYELLT 210
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 139/315 (44%), Gaps = 46/315 (14%)
Query: 154 MPSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRA 212
+P + T SHL +D + ++G GG V+ AR L +VAVKV R
Sbjct: 15 VPRGSHMTTPSHL-----SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARD 69
Query: 213 LK---GFDVECEMMKSIRHRNLIKVISTCSNE----EFKALVLEYMPHGSLEKYMYSSNY 265
F E + ++ H ++ V T E +V+EY+ +L +++
Sbjct: 70 PSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG- 128
Query: 266 ILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 325
+ + I + +A A + L+F + IIH D+KP+N+++ + DF IA+ +
Sbjct: 129 --PMTPKRAIEV-IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD 185
Query: 326 EDQSMTQTQT-LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGE-- 382
S+TQT + T Y++PE R V DVYS G +L E TG+ P F G+
Sbjct: 186 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSP 241
Query: 383 --MTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFN-LAMECTVESPEQRI 439
+ +H D +P S A+ + +S + + ++ ++PE R
Sbjct: 242 VSVAYQHVREDPIPPS------------------ARHEGLSADLDAVVLKALAKNPENRY 283
Query: 440 N-AREIVAKLLKIRD 453
A E+ A L+++ +
Sbjct: 284 QTAAEMRADLVRVHN 298
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 118/266 (44%), Gaps = 26/266 (9%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G +G VY+ + VAVK + ++ F E +MK I+H NL++++ C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E +++E+M +G+L Y+ N ++ L + ++SA+EYL IH D
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 137
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDV 358
L N L+ +N + ++DF +++L+TG D I + APE + S DV
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 359 YSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQ 418
++FG++L E T P +++ L ++D E
Sbjct: 197 WAFGVLLWEIATYGMS-------------------PYPGIDLSQVYELLEKDYRMERPEG 237
Query: 419 CVSCVFNLAMECTVESPEQRINAREI 444
C V+ L C +P R + EI
Sbjct: 238 CPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 181 IGRGGFGSVY-----KARLGDGMEVAVKVFNLQCGRALK-GFDVECEMMKSIRHRNLIKV 234
+G G FG V G G VAVK CG L+ G+ E E+++++ H +++K
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 235 ISTCSNEEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
C ++ K+ LV+EY+P GSL Y+ + + + Q L + + YLH +
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLAQLLLFAQQICEGMAYLH---AQ 130
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL-TGEDQSMTQTQTLATIGYMAPEYGREGR 351
IH L NVLLD++ + + DF +AK + G + + + + + APE +E +
Sbjct: 131 HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECK 190
Query: 352 VSTNGDVYSFGIMLMETFT 370
DV+SFG+ L E T
Sbjct: 191 FYYASDVWSFGVTLYELLT 209
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 113/236 (47%), Gaps = 23/236 (9%)
Query: 155 PSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKA-RLGDG----MEVAVKVFNLQC 209
P+ A R EL R ++G G FG+VYK + +G + VA+K+ N
Sbjct: 4 PNQAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT 56
Query: 210 G-RALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILD 268
G +A F E +M S+ H +L++++ C + + LV + MPHG L +Y++ +
Sbjct: 57 GPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIG 115
Query: 269 IFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 328
LN + +A + YL ++H DL NVL+ ++DF +A+LL G+++
Sbjct: 116 SQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 172
Query: 329 SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLME--TFTGKK----PTNEI 378
I +MA E + + DV+S+G+ + E TF GK PT EI
Sbjct: 173 EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI 228
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 113/249 (45%), Gaps = 26/249 (10%)
Query: 162 TFSHLELCRATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALK---GFD 217
T SHL +D + ++G GG V+ AR L +VAVKV R F
Sbjct: 6 TPSHL-----SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR 60
Query: 218 VECEMMKSIRHRNLIKVISTCSNE----EFKALVLEYMPHGSLEKYMYSSNYILDIFQRL 273
E + ++ H ++ V T E +V+EY+ +L +++ + +
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKR 117
Query: 274 NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 333
I + +A A + L+F + IIH D+KP+N+++ + DF IA+ + S+TQT
Sbjct: 118 AIEV-IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 334 QT-LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGE----MTLKHW 388
+ T Y++PE R V DVYS G +L E TG+ P F G+ + +H
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHV 232
Query: 389 VNDWLPIST 397
D +P S
Sbjct: 233 REDPIPPSA 241
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 181 IGRGGFGSVY-----KARLGDGMEVAVKVFNLQCG-RALKGFDVECEMMKSIRHRNLIKV 234
+G G FG V G G VAVK CG + G+ E ++++++ H ++IK
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 235 ISTCSNEEFKAL--VLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
C ++ K+L V+EY+P GSL Y+ + + + Q L + + YLH S
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIGLAQLLLFAQQICEGMAYLH---SQ 136
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL-TGEDQSMTQTQTLATIGYMAPEYGREGR 351
IH +L NVLLD++ + + DF +AK + G + + + + + APE +E +
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK 196
Query: 352 VSTNGDVYSFGIMLMETFT 370
DV+SFG+ L E T
Sbjct: 197 FYYASDVWSFGVTLYELLT 215
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 118/266 (44%), Gaps = 26/266 (9%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G +G VY+ + VAVK + ++ F E +MK I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E +++E+M +G+L Y+ N ++ L + ++SA+EYL IH D
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 141
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDV 358
L N L+ +N + ++DF +++L+TG D I + APE + S DV
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 359 YSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQ 418
++FG++L E T P +++ L ++D E
Sbjct: 201 WAFGVLLWEIATYGMS-------------------PYPGIDLSQVYELLEKDYRMERPEG 241
Query: 419 CVSCVFNLAMECTVESPEQRINAREI 444
C V+ L C +P R + EI
Sbjct: 242 CPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 95/192 (49%), Gaps = 7/192 (3%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G +G VY + VAVK + ++ F E +MK I+H NL++++ C+
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNY-ILDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E +V EYMP+G+L Y+ N + L + ++SA+EYL IH D
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE---KKNFIHRD 155
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDV 358
L N L+ +N V ++DF +++L+TG D I + APE S DV
Sbjct: 156 LAARNCLVGENHVVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNTFSIKSDV 214
Query: 359 YSFGIMLMETFT 370
++FG++L E T
Sbjct: 215 WAFGVLLWEIAT 226
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 119/261 (45%), Gaps = 30/261 (11%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
+G G FG V+ +VAVK Q + F E +MK ++H+ L+++ + +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
E ++ EYM +GSL ++ + + I L I + L++ +A + ++ IH +L
Sbjct: 76 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRNL 131
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDV 358
+ +N+L+ D + ++DF +A+L+ ED T + I + APE G + DV
Sbjct: 132 RAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 189
Query: 359 YSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKE 417
+SFGI+L E T G+ P + N E V NL + V +
Sbjct: 190 WSFGILLTEIVTHGRIPYPGMTNPE------------------VIQNL--ERGYRMVRPD 229
Query: 418 QCVSCVFNLAMECTVESPEQR 438
C ++ L C E PE R
Sbjct: 230 NCPEELYQLMRLCWKERPEDR 250
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 127/291 (43%), Gaps = 34/291 (11%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G FG VY+ + VAVK + ++ F E +MK I+H NL++++ C+
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E ++ E+M +G+L Y+ N + L + ++SA+EYL IH D
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 134
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDV 358
L N L+ +N + ++DF +++L+TG D I + APE + S DV
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 359 YSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKE 417
++FG++L E T G P I P E++ ++D E
Sbjct: 194 WAFGVLLWEIATYGMSPYPGI--------------DPSQVYELL------EKDYRMERPE 233
Query: 418 QCVSCVFNLAMECTVESPEQRIN------AREIVAKLLKIRDSLLRNVGDR 462
C V+ L C +P R + A E + + I D + + +G R
Sbjct: 234 GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGKR 284
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 119/267 (44%), Gaps = 28/267 (10%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G +G VY+ + VAVK + ++ F E +MK I+H NL++++ C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E +++E+M +G+L Y+ N + L + ++SA+EYL IH D
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 134
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDV 358
L N L+ +N + ++DF +++L+TG D I + APE + S DV
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 359 YSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKE 417
++FG++L E T G P I P E++ ++D E
Sbjct: 194 WAFGVLLWEIATYGMSPYPGI--------------DPSQVYELL------EKDYRMERPE 233
Query: 418 QCVSCVFNLAMECTVESPEQRINAREI 444
C V+ L C +P R + EI
Sbjct: 234 GCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 12/207 (5%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-ALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G FG V+ +VA+K L+ G + + F E ++MK ++H L+++ + S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKT--LKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E +V EYM GSL ++ L + +++ VA+ + Y+ IH D
Sbjct: 75 EEPI-YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRD 130
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGD 357
L+ +N+L+ + ++ ++DF +A+L+ ED T Q I + APE GR + D
Sbjct: 131 LRSANILVGNGLICKIADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 358 VYSFGIMLMETFT-GKKPTNEIFNGEM 383
V+SFGI+L E T G+ P + N E+
Sbjct: 189 VWSFGILLTELVTKGRVPYPGMNNREV 215
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 126/290 (43%), Gaps = 32/290 (11%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G +G VY+ + VAVK + ++ F E +MK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E +++E+M +G+L Y+ N + L + ++SA+EYL IH D
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDV 358
L N L+ +N + ++DF +++L+TG D I + APE + S DV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 359 YSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQ 418
++FG++L E T P +++ L ++D E
Sbjct: 196 WAFGVLLWEIATYGMS-------------------PYPGIDLSQVYELLEKDYRMERPEG 236
Query: 419 CVSCVFNLAMECTVESPEQRIN------AREIVAKLLKIRDSLLRNVGDR 462
C V+ L C +P R + A E + + I D + + +G R
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGKR 286
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 26/266 (9%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G +G VY+ + VAVK + ++ F E +MK I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E ++ E+M +G+L Y+ N ++ L + ++SA+EYL IH D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 141
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDV 358
L N L+ +N + ++DF +++L+TG D I + APE + S DV
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 359 YSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQ 418
++FG++L E T P +++ L ++D E
Sbjct: 201 WAFGVLLWEIATYGMS-------------------PYPGIDLSQVYELLEKDYRMERPEG 241
Query: 419 CVSCVFNLAMECTVESPEQRINAREI 444
C V+ L C +P R + EI
Sbjct: 242 CPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 129/292 (44%), Gaps = 47/292 (16%)
Query: 178 NNLIGRGGFGSVYKARLG-DG--MEVAVKVFNLQCGRA-LKGFDVECEMM-KSIRHRNLI 232
++IG G FG V KAR+ DG M+ A+K + + F E E++ K H N+I
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 233 KVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYI---------------LDIFQRLNIMI 277
++ C + + L +EY PHG+L ++ S + L Q L+
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 278 DVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA 337
DVA ++YL IH DL N+L+ +N VA ++DF +++ G++ + +T
Sbjct: 150 DVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRL 203
Query: 338 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPIS 396
+ +MA E +TN DV+S+G++L E + G P + E+ K LP
Sbjct: 204 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK------LP-- 255
Query: 397 TMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
+ C V++L +C E P +R + +I+ L
Sbjct: 256 ------------QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 295
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 26/266 (9%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G +G VY+ + VAVK + ++ F E +MK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E +++E+M +G+L Y+ N + L + ++SA+EYL IH D
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDV 358
L N L+ +N + ++DF +++L+TG D I + APE + S DV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 359 YSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQ 418
++FG++L E T P +++ L ++D E
Sbjct: 196 WAFGVLLWEIATYGMS-------------------PYPGIDLSQVYELLEKDYRMERPEG 236
Query: 419 CVSCVFNLAMECTVESPEQRINAREI 444
C V+ L C +P R + EI
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 102/208 (49%), Gaps = 7/208 (3%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
+G G FG V + +VA+K+ + + F E ++M ++ H L+++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLK 300
+ ++ EYM +G L Y+ + Q L + DV A+EYL S +H DL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 147
Query: 301 PSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYS 360
N L++D V +SDF +++ + +D+ + + + + PE + S+ D+++
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVL-DDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 206
Query: 361 FGIMLMETFT-GKKPTNEIFNGEMTLKH 387
FG+++ E ++ GK P N E T +H
Sbjct: 207 FGVLMWEIYSLGKMPYERFTNSE-TAEH 233
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 129/292 (44%), Gaps = 47/292 (16%)
Query: 178 NNLIGRGGFGSVYKARLG-DG--MEVAVKVFNLQCGRA-LKGFDVECEMM-KSIRHRNLI 232
++IG G FG V KAR+ DG M+ A+K + + F E E++ K H N+I
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 233 KVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYI---------------LDIFQRLNIMI 277
++ C + + L +EY PHG+L ++ S + L Q L+
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 278 DVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA 337
DVA ++YL IH DL N+L+ +N VA ++DF +++ G++ + +T
Sbjct: 140 DVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRL 193
Query: 338 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPIS 396
+ +MA E +TN DV+S+G++L E + G P + E+ K LP
Sbjct: 194 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK------LP-- 245
Query: 397 TMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
+ C V++L +C E P +R + +I+ L
Sbjct: 246 ------------QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 285
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 26/266 (9%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G +G VY+ + VAVK + ++ F E +MK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E ++ E+M +G+L Y+ N ++ L + ++SA+EYL IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDV 358
L N L+ +N + ++DF +++L+TG D I + APE + S DV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 359 YSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQ 418
++FG++L E T P +++ L ++D E
Sbjct: 196 WAFGVLLWEIATYGMS-------------------PYPGIDLSQVYELLEKDYRMERPEG 236
Query: 419 CVSCVFNLAMECTVESPEQRINAREI 444
C V+ L C +P R + EI
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 12/208 (5%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV-----ECEMMKSI 226
+ F ++G G F +V AR L E A+K+ L+ +K V E ++M +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 89
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
H +K+ T ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAEIVSALEYL 148
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H IIH DLKP N+LL+++M ++DF AK+L+ E + + T Y++PE
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 205
Query: 347 GREGRVSTNGDVYSFGIMLMETFTGKKP 374
E S + D+++ G ++ + G P
Sbjct: 206 LTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 26/266 (9%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G +G VY+ + VAVK + ++ F E +MK I+H NL++++ C+
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E ++ E+M +G+L Y+ N ++ L + ++SA+EYL IH D
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 140
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDV 358
L N L+ +N + ++DF +++L+TG D I + APE + S DV
Sbjct: 141 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 199
Query: 359 YSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQ 418
++FG++L E T P +++ L ++D E
Sbjct: 200 WAFGVLLWEIATYGMS-------------------PYPGIDLSQVYELLEKDYRMERPEG 240
Query: 419 CVSCVFNLAMECTVESPEQRINAREI 444
C V+ L C +P R + EI
Sbjct: 241 CPEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 181 IGRGGFGSVY-----KARLGDGMEVAVKVFNLQCG-RALKGFDVECEMMKSIRHRNLIKV 234
+G G FG V G G VAVK CG + G+ E ++++++ H ++IK
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 235 ISTCSNEEFKAL--VLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
C ++ K+L V+EY+P GSL Y+ + + + Q L + + YLH +
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIGLAQLLLFAQQICEGMAYLH---AQ 136
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL-TGEDQSMTQTQTLATIGYMAPEYGREGR 351
IH +L NVLLD++ + + DF +AK + G + + + + + APE +E +
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK 196
Query: 352 VSTNGDVYSFGIMLMETFT 370
DV+SFG+ L E T
Sbjct: 197 FYYASDVWSFGVTLYELLT 215
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 26/266 (9%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G +G VY+ + VAVK + ++ F E +MK I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E ++ E+M +G+L Y+ N ++ L + ++SA+EYL IH D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 141
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDV 358
L N L+ +N + ++DF +++L+TG D I + APE + S DV
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 359 YSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQ 418
++FG++L E T P +++ L ++D E
Sbjct: 201 WAFGVLLWEIATYGMS-------------------PYPGIDLSQVYELLEKDYRMERPEG 241
Query: 419 CVSCVFNLAMECTVESPEQRINAREI 444
C V+ L C +P R + EI
Sbjct: 242 CPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 118/261 (45%), Gaps = 30/261 (11%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
+G G G V+ +VAVK Q + F E +MK ++H+ L+++ + +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
E ++ EYM +GSL ++ + + I L I + L++ +A + ++ IH DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 135
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDV 358
+ +N+L+ D + ++DF +A+L+ ED T + I + APE G + DV
Sbjct: 136 RAANILVSDTLSCKIADFGLARLI--EDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 359 YSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKE 417
+SFGI+L E T G+ P + N E+ I +E V +
Sbjct: 194 WSFGILLTEIVTHGRIPYPGMTNPEV-----------IQNLE---------RGYRMVRPD 233
Query: 418 QCVSCVFNLAMECTVESPEQR 438
C ++ L C E PE R
Sbjct: 234 NCPEELYQLMRLCWKERPEDR 254
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 26/266 (9%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G +G VY+ + VAVK + ++ F E +MK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E ++ E+M +G+L Y+ N ++ L + ++SA+EYL IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDV 358
L N L+ +N + ++DF +++L+TG D I + APE + S DV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 359 YSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQ 418
++FG++L E T P +++ L ++D E
Sbjct: 196 WAFGVLLWEIATYGMS-------------------PYPGIDLSQVYELLEKDYRMERPEG 236
Query: 419 CVSCVFNLAMECTVESPEQRINAREI 444
C V+ L C +P R + EI
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 102/208 (49%), Gaps = 7/208 (3%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
+G G FG V + +VA+K+ + + F E ++M ++ H L+++ C+
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLK 300
+ ++ EYM +G L Y+ + Q L + DV A+EYL S +H DL
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 131
Query: 301 PSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYS 360
N L++D V +SDF +++ + +D+ + + + + PE + S+ D+++
Sbjct: 132 ARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 190
Query: 361 FGIMLMETFT-GKKPTNEIFNGEMTLKH 387
FG+++ E ++ GK P N E T +H
Sbjct: 191 FGVLMWEIYSLGKMPYERFTNSE-TAEH 217
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 102/208 (49%), Gaps = 7/208 (3%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
+G G FG V + +VA+K+ + + F E ++M ++ H L+++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLK 300
+ ++ EYM +G L Y+ + Q L + DV A+EYL S +H DL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 147
Query: 301 PSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYS 360
N L++D V +SDF +++ + +D+ + + + + PE + S+ D+++
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 206
Query: 361 FGIMLMETFT-GKKPTNEIFNGEMTLKH 387
FG+++ E ++ GK P N E T +H
Sbjct: 207 FGVLMWEIYSLGKMPYERFTNSE-TAEH 233
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 26/266 (9%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G +G VY+ + VAVK + ++ F E +MK I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E ++ E+M +G+L Y+ N ++ L + ++SA+EYL IH D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 141
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDV 358
L N L+ +N + ++DF +++L+TG D I + APE + S DV
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 359 YSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQ 418
++FG++L E T P +++ L ++D E
Sbjct: 201 WAFGVLLWEIATYGMS-------------------PYPGIDLSQVYELLEKDYRMERPEG 241
Query: 419 CVSCVFNLAMECTVESPEQRINAREI 444
C V+ L C +P R + EI
Sbjct: 242 CPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 26/266 (9%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G +G VY+ + VAVK + ++ F E +MK I+H NL++++ C+
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E ++ E+M +G+L Y+ N ++ L + ++SA+EYL IH D
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 149
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDV 358
L N L+ +N + ++DF +++L+TG D I + APE + S DV
Sbjct: 150 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 208
Query: 359 YSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQ 418
++FG++L E T P +++ L ++D E
Sbjct: 209 WAFGVLLWEIATYGMS-------------------PYPGIDLSQVYELLEKDYRMERPEG 249
Query: 419 CVSCVFNLAMECTVESPEQRINAREI 444
C V+ L C +P R + EI
Sbjct: 250 CPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 102/208 (49%), Gaps = 7/208 (3%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
+G G FG V + +VA+K+ + + F E ++M ++ H L+++ C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLK 300
+ ++ EYM +G L Y+ + Q L + DV A+EYL S +H DL
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 132
Query: 301 PSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYS 360
N L++D V +SDF +++ + +D+ + + + + PE + S+ D+++
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 191
Query: 361 FGIMLMETFT-GKKPTNEIFNGEMTLKH 387
FG+++ E ++ GK P N E T +H
Sbjct: 192 FGVLMWEIYSLGKMPYERFTNSE-TAEH 218
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 26/266 (9%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G +G VY+ + VAVK + ++ F E +MK I+H NL++++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E ++ E+M +G+L Y+ N ++ L + ++SA+EYL IH D
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 138
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDV 358
L N L+ +N + ++DF +++L+TG D I + APE + S DV
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 359 YSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQ 418
++FG++L E T P +++ L ++D E
Sbjct: 198 WAFGVLLWEIATYGMS-------------------PYPGIDLSQVYELLEKDYRMERPEG 238
Query: 419 CVSCVFNLAMECTVESPEQRINAREI 444
C V+ L C +P R + EI
Sbjct: 239 CPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 26/266 (9%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G +G VY+ + VAVK + ++ F E +MK I+H NL++++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E ++ E+M +G+L Y+ N ++ L + ++SA+EYL IH D
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 138
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDV 358
L N L+ +N + ++DF +++L+TG D I + APE + S DV
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 359 YSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQ 418
++FG++L E T P +++ L ++D E
Sbjct: 198 WAFGVLLWEIATYGMS-------------------PYPGIDLSQVYELLEKDYRMERPEG 238
Query: 419 CVSCVFNLAMECTVESPEQRINAREI 444
C V+ L C +P R + EI
Sbjct: 239 CPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 131/289 (45%), Gaps = 36/289 (12%)
Query: 179 NLIGRGGFGSVYKA--RLGDGMEVAVKVFNLQCG---RALKGFDVECEMMKSIRHRNLIK 233
+IG G FG V +L E+ V + L+ G + + F E +M H N+I
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAP 293
+ + ++ E+M +GSL+ ++ ++ + Q + ++ +A+ ++YL
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA---DMN 155
Query: 294 IIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA---TIGYMAPEYGREG 350
+H DL N+L++ N+V +SDF +++ L + T T L I + APE +
Sbjct: 156 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR 215
Query: 351 RVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
+ ++ DV+S+GI++ E + G++P +W ++ +V+ A ++
Sbjct: 216 KFTSASDVWSYGIVMWEVMSYGERP------------YW-----DMTNQDVINA---IEQ 255
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRN 458
D C S + L ++C + R +IV L D ++RN
Sbjct: 256 DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL----DKMIRN 300
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 102/208 (49%), Gaps = 7/208 (3%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
+G G FG V + +VA+K+ + + F E ++M ++ H L+++ C+
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLK 300
+ ++ EYM +G L Y+ + Q L + DV A+EYL S +H DL
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 127
Query: 301 PSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYS 360
N L++D V +SDF +++ + +D+ + + + + PE + S+ D+++
Sbjct: 128 ARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 186
Query: 361 FGIMLMETFT-GKKPTNEIFNGEMTLKH 387
FG+++ E ++ GK P N E T +H
Sbjct: 187 FGVLMWEIYSLGKMPYERFTNSE-TAEH 213
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 102/208 (49%), Gaps = 7/208 (3%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
+G G FG V + +VA+K+ + + F E ++M ++ H L+++ C+
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLK 300
+ ++ EYM +G L Y+ + Q L + DV A+EYL S +H DL
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 138
Query: 301 PSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYS 360
N L++D V +SDF +++ + +D+ + + + + PE + S+ D+++
Sbjct: 139 ARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 197
Query: 361 FGIMLMETFT-GKKPTNEIFNGEMTLKH 387
FG+++ E ++ GK P N E T +H
Sbjct: 198 FGVLMWEIYSLGKMPYERFTNSE-TAEH 224
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 125/290 (43%), Gaps = 32/290 (11%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G +G VY+ + VAVK + ++ F E +MK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E ++ E+M +G+L Y+ N + L + ++SA+EYL IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDV 358
L N L+ +N + ++DF +++L+TG D I + APE + S DV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 359 YSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQ 418
++FG++L E T P +++ L ++D E
Sbjct: 196 WAFGVLLWEIATYGMS-------------------PYPGIDLSQVYELLEKDYRMERPEG 236
Query: 419 CVSCVFNLAMECTVESPEQRIN------AREIVAKLLKIRDSLLRNVGDR 462
C V+ L C +P R + A E + + I D + + +G R
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGKR 286
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 125/290 (43%), Gaps = 32/290 (11%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G +G VY+ + VAVK + ++ F E +MK I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E ++ E+M +G+L Y+ N + L + ++SA+EYL IH D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 141
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDV 358
L N L+ +N + ++DF +++L+TG D I + APE + S DV
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 359 YSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQ 418
++FG++L E T P +++ L ++D E
Sbjct: 201 WAFGVLLWEIATYGMS-------------------PYPGIDLSQVYELLEKDYRMERPEG 241
Query: 419 CVSCVFNLAMECTVESPEQRIN------AREIVAKLLKIRDSLLRNVGDR 462
C V+ L C +P R + A E + + I D + + +G R
Sbjct: 242 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGKR 291
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 116/266 (43%), Gaps = 26/266 (9%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G +G VY+ + VAVK + ++ F E +MK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E ++ E+M +G+L Y+ N + L + ++SA+EYL IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDV 358
L N L+ +N + ++DF +++L+TG D I + APE + S DV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 359 YSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQ 418
++FG++L E T P +++ L ++D E
Sbjct: 196 WAFGVLLWEIATYGMS-------------------PYPGIDLSQVYELLEKDYRMERPEG 236
Query: 419 CVSCVFNLAMECTVESPEQRINAREI 444
C V+ L C +P R + EI
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 102/208 (49%), Gaps = 7/208 (3%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
+G G FG V + +VA+K+ + + F E ++M ++ H L+++ C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLK 300
+ ++ EYM +G L Y+ + Q L + DV A+EYL S +H DL
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 132
Query: 301 PSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYS 360
N L++D V +SDF +++ + +D+ + + + + PE + S+ D+++
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWA 191
Query: 361 FGIMLMETFT-GKKPTNEIFNGEMTLKH 387
FG+++ E ++ GK P N E T +H
Sbjct: 192 FGVLMWEIYSLGKMPYERFTNSE-TAEH 218
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 26/266 (9%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G +G VY+ + VAVK + ++ F E +MK I+H NL++++ C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E ++ E+M +G+L Y+ N ++ L + ++SA+EYL IH D
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 137
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDV 358
L N L+ +N + ++DF +++L+TG D I + APE + S DV
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 359 YSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQ 418
++FG++L E T P +++ L ++D E
Sbjct: 197 WAFGVLLWEIATYGMS-------------------PYPGIDLSQVYELLEKDYRMERPEG 237
Query: 419 CVSCVFNLAMECTVESPEQRINAREI 444
C V+ L C +P R + EI
Sbjct: 238 CPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 12/211 (5%)
Query: 170 RATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV-----ECEMM 223
+ + F ++G G F +V AR L E A+K+ L+ +K V E ++M
Sbjct: 6 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVM 63
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
+ H +K+ T ++E L Y +G L KY+ + R ++ SAL
Sbjct: 64 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 122
Query: 284 EYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
EYLH IIH DLKP N+LL+++M ++DF AK+L+ E + + T Y++
Sbjct: 123 EYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 179
Query: 344 PEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
PE E + D+++ G ++ + G P
Sbjct: 180 PELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 12/211 (5%)
Query: 170 RATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV-----ECEMM 223
+ + F ++G G F +V AR L E A+K+ L+ +K V E ++M
Sbjct: 7 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVM 64
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
+ H +K+ T ++E L Y +G L KY+ + R ++ SAL
Sbjct: 65 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 123
Query: 284 EYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
EYLH IIH DLKP N+LL+++M ++DF AK+L+ E + + T Y++
Sbjct: 124 EYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 180
Query: 344 PEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
PE E + D+++ G ++ + G P
Sbjct: 181 PELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 26/266 (9%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G +G VY+ + VAVK + ++ F E +MK I+H NL++++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E ++ E+M +G+L Y+ N ++ L + ++SA+EYL IH D
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 138
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDV 358
L N L+ +N + ++DF +++L+TG D I + APE + S DV
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 359 YSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQ 418
++FG++L E T P +++ L ++D E
Sbjct: 198 WAFGVLLWEIATYGMS-------------------PYPGIDLSQVYELLEKDYRMERPEG 238
Query: 419 CVSCVFNLAMECTVESPEQRINAREI 444
C V+ L C +P R + EI
Sbjct: 239 CPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 12/211 (5%)
Query: 170 RATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV-----ECEMM 223
+ + F ++G G F +V AR L E A+K+ L+ +K V E ++M
Sbjct: 5 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVM 62
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
+ H +K+ T ++E L Y +G L KY+ + R ++ SAL
Sbjct: 63 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 121
Query: 284 EYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
EYLH IIH DLKP N+LL+++M ++DF AK+L+ E + + T Y++
Sbjct: 122 EYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 178
Query: 344 PEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
PE E + D+++ G ++ + G P
Sbjct: 179 PELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 12/211 (5%)
Query: 170 RATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV-----ECEMM 223
+ + F ++G G F +V AR L E A+K+ L+ +K V E ++M
Sbjct: 4 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVM 61
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
+ H +K+ T ++E L Y +G L KY+ + R ++ SAL
Sbjct: 62 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 120
Query: 284 EYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
EYLH IIH DLKP N+LL+++M ++DF AK+L+ E + + T Y++
Sbjct: 121 EYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 177
Query: 344 PEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
PE E + D+++ G ++ + G P
Sbjct: 178 PELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 127/291 (43%), Gaps = 34/291 (11%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G +G VY+ + VAVK + ++ F E +MK I+H NL++++ C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E ++ E+M +G+L Y+ N + L + ++SA+EYL IH D
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 134
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDV 358
L N L+ +N + ++DF +++L+TG D I + APE + S DV
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTG-DTFTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 359 YSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKE 417
++FG++L E T G P I P E++ ++D E
Sbjct: 194 WAFGVLLWEIATYGMSPYPGI--------------DPSQVYELL------EKDYRMERPE 233
Query: 418 QCVSCVFNLAMECTVESPEQRIN------AREIVAKLLKIRDSLLRNVGDR 462
C V+ L C +P R + A E + + I D + + +G R
Sbjct: 234 GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGKR 284
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV-----ECEMMKSI 226
+ F ++G G F +V AR L E A+K+ L+ +K V E ++M +
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 86
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
H +K+ T ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 145
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H IIH DLKP N+LL+++M ++DF AK+L+ E + + T Y++PE
Sbjct: 146 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 202
Query: 347 GREGRVSTNGDVYSFGIMLMETFTGKKP 374
E + D+++ G ++ + G P
Sbjct: 203 LTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV-----ECEMMKSI 226
+ F ++G G F +V AR L E A+K+ L+ +K V E ++M +
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 71
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
H +K+ T ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 72 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 130
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H IIH DLKP N+LL+++M ++DF AK+L+ E + + T Y++PE
Sbjct: 131 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 187
Query: 347 GREGRVSTNGDVYSFGIMLMETFTGKKP 374
E + D+++ G ++ + G P
Sbjct: 188 LTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV-----ECEMMKSI 226
+ F ++G G F +V AR L E A+K+ L+ +K V E ++M +
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 90
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
H +K+ T ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 149
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H IIH DLKP N+LL+++M ++DF AK+L+ E + + T Y++PE
Sbjct: 150 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 206
Query: 347 GREGRVSTNGDVYSFGIMLMETFTGKKP 374
E + D+++ G ++ + G P
Sbjct: 207 LTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV-----ECEMMKSI 226
+ F ++G G F +V AR L E A+K+ L+ +K V E ++M +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 89
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
H +K+ T ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 148
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H IIH DLKP N+LL+++M ++DF AK+L+ E + + T Y++PE
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 347 GREGRVSTNGDVYSFGIMLMETFTGKKP 374
E + D+++ G ++ + G P
Sbjct: 206 LTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV-----ECEMMKSI 226
+ F ++G G F +V AR L E A+K+ L+ +K V E ++M +
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 86
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
H +K+ T ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 145
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H IIH DLKP N+LL+++M ++DF AK+L+ E + + T Y++PE
Sbjct: 146 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 202
Query: 347 GREGRVSTNGDVYSFGIMLMETFTGKKP 374
E + D+++ G ++ + G P
Sbjct: 203 LTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 104/198 (52%), Gaps = 11/198 (5%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-ALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G FG V+ + +VAVK L+ G +++ F E +MK+++H L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVK--TLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRL-NIMIDVASALEYLHFGYSAPIIHCD 298
EE ++ EYM GSL ++ S + +L + +A + Y+ IH D
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRD 135
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGD 357
L+ +NVL+ ++++ ++DF +A+++ ED T + I + APE G + D
Sbjct: 136 LRAANVLVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSD 193
Query: 358 VYSFGIMLMETFT-GKKP 374
V+SFGI+L E T GK P
Sbjct: 194 VWSFGILLYEIVTYGKIP 211
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV-----ECEMMKSI 226
+ F ++G G F +V AR L E A+K+ L+ +K V E ++M +
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 90
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
H +K+ T ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 149
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H IIH DLKP N+LL+++M ++DF AK+L+ E + + T Y++PE
Sbjct: 150 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 206
Query: 347 GREGRVSTNGDVYSFGIMLMETFTGKKP 374
E + D+++ G ++ + G P
Sbjct: 207 LTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV-----ECEMMKSI 226
+ F ++G G F +V AR L E A+K+ L+ +K V E ++M +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 87
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
H +K+ T ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 146
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H IIH DLKP N+LL+++M ++DF AK+L+ E + + T Y++PE
Sbjct: 147 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 347 GREGRVSTNGDVYSFGIMLMETFTGKKP 374
E + D+++ G ++ + G P
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV-----ECEMMKSI 226
+ F ++G G F +V AR L E A+K+ L+ +K V E ++M +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 87
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
H +K+ T ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 146
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H IIH DLKP N+LL+++M ++DF AK+L+ E + + T Y++PE
Sbjct: 147 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 347 GREGRVSTNGDVYSFGIMLMETFTGKKP 374
E + D+++ G ++ + G P
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV-----ECEMMKSI 226
+ F ++G G F +V AR L E A+K+ L+ +K V E ++M +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 89
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
H +K+ T ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 148
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H IIH DLKP N+LL+++M ++DF AK+L+ E + + T Y++PE
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 347 GREGRVSTNGDVYSFGIMLMETFTGKKP 374
E + D+++ G ++ + G P
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV-----ECEMMKSI 226
+ F ++G G F +V AR L E A+K+ L+ +K V E ++M +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 87
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
H +K+ T ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 146
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H IIH DLKP N+LL+++M ++DF AK+L+ E + + T Y++PE
Sbjct: 147 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPEL 203
Query: 347 GREGRVSTNGDVYSFGIMLMETFTGKKP 374
E + D+++ G ++ + G P
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV-----ECEMMKSI 226
+ F ++G G F +V AR L E A+K+ L+ +K V E ++M +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 89
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
H +K+ T ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 148
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H IIH DLKP N+LL+++M ++DF AK+L+ E + + T Y++PE
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 347 GREGRVSTNGDVYSFGIMLMETFTGKKP 374
E + D+++ G ++ + G P
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV-----ECEMMKSI 226
+ F ++G G F +V AR L E A+K+ L+ +K V E ++M +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 89
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
H +K+ T ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 148
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H IIH DLKP N+LL+++M ++DF AK+L+ E + + T Y++PE
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 347 GREGRVSTNGDVYSFGIMLMETFTGKKP 374
E + D+++ G ++ + G P
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV-----ECEMMKSI 226
+ F ++G G F +V AR L E A+K+ L+ +K V E ++M +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 89
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
H +K+ T ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 148
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H IIH DLKP N+LL+++M ++DF AK+L+ E + + T Y++PE
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 347 GREGRVSTNGDVYSFGIMLMETFTGKKP 374
E + D+++ G ++ + G P
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 129/292 (44%), Gaps = 47/292 (16%)
Query: 178 NNLIGRGGFGSVYKARLG-DG--MEVAVKVFNLQCGRA-LKGFDVECEMM-KSIRHRNLI 232
++IG G FG V KAR+ DG M+ A+K + + F E E++ K H N+I
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 233 KVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYI---------------LDIFQRLNIMI 277
++ C + + L +EY PHG+L ++ S + L Q L+
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 278 DVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA 337
DVA ++YL IH +L N+L+ +N VA ++DF +++ G++ + +T
Sbjct: 147 DVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRL 200
Query: 338 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPIS 396
+ +MA E +TN DV+S+G++L E + G P + E+ K LP
Sbjct: 201 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK------LP-- 252
Query: 397 TMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
+ C V++L +C E P +R + +I+ L
Sbjct: 253 ------------QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 292
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV-----ECEMMKSI 226
+ F ++G G F +V AR L E A+K+ L+ +K V E ++M +
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 92
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
H +K+ T ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 93 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 151
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H IIH DLKP N+LL+++M ++DF AK+L+ E + + T Y++PE
Sbjct: 152 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 208
Query: 347 GREGRVSTNGDVYSFGIMLMETFTGKKP 374
E + D+++ G ++ + G P
Sbjct: 209 LTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 117/266 (43%), Gaps = 26/266 (9%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G +G VY+ + VAVK + ++ F E +MK I+H NL++++ C+
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E ++ E+M +G+L Y+ N ++ L + ++SA+EYL IH +
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRN 340
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDV 358
L N L+ +N + ++DF +++L+TG D I + APE + S DV
Sbjct: 341 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 399
Query: 359 YSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQ 418
++FG++L E T P +++ L ++D E
Sbjct: 400 WAFGVLLWEIATYGMS-------------------PYPGIDLSQVYELLEKDYRMERPEG 440
Query: 419 CVSCVFNLAMECTVESPEQRINAREI 444
C V+ L C +P R + EI
Sbjct: 441 CPEKVYELMRACWQWNPSDRPSFAEI 466
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 117/266 (43%), Gaps = 26/266 (9%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G +G VY+ + VAVK + ++ F E +MK I+H NL++++ C+
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
E ++ E+M +G+L Y+ N ++ L + ++SA+EYL IH +
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRN 382
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDV 358
L N L+ +N + ++DF +++L+TG D I + APE + S DV
Sbjct: 383 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 441
Query: 359 YSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQ 418
++FG++L E T P +++ L ++D E
Sbjct: 442 WAFGVLLWEIATYGMS-------------------PYPGIDLSQVYELLEKDYRMERPEG 482
Query: 419 CVSCVFNLAMECTVESPEQRINAREI 444
C V+ L C +P R + EI
Sbjct: 483 CPEKVYELMRACWQWNPSDRPSFAEI 508
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 139/324 (42%), Gaps = 35/324 (10%)
Query: 148 PSNDANMPSI-ATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVF 205
P+ N P+I + E+ R TD + + +G G +G VY+ + VAVK
Sbjct: 196 PAPKRNKPTIYGVSPNYDKWEMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL 253
Query: 206 NLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNY 265
+ ++ F E +MK I+H NL++++ C+ E ++ E+M +G+L Y+ N
Sbjct: 254 K-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR 312
Query: 266 I-LDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 324
+ L + ++SA+EYL IH +L N L+ +N + ++DF +++L+T
Sbjct: 313 QEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369
Query: 325 GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMT 384
G D I + APE + S DV++FG++L E T
Sbjct: 370 G-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 418
Query: 385 LKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRIN---- 440
P +++ L ++D E C V+ L C +P R +
Sbjct: 419 ---------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 469
Query: 441 --AREIVAKLLKIRDSLLRNVGDR 462
A E + + I D + + +G R
Sbjct: 470 HQAFETMFQESSISDEVEKELGKR 493
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 12/208 (5%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV-----ECEMMKSI 226
+ F ++G G F + AR L E A+K+ L+ +K V E ++M +
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 87
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
H +K+ T ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 146
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H IIH DLKP N+LL+++M ++DF AK+L+ E + + T Y++PE
Sbjct: 147 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 347 GREGRVSTNGDVYSFGIMLMETFTGKKP 374
E + D+++ G ++ + G P
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 103/220 (46%), Gaps = 16/220 (7%)
Query: 164 SHLELCRATDGFSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRAL 213
+ L C+ F E +L +G+G FGSV R LGD G VAVK
Sbjct: 9 AQLYACQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ 68
Query: 214 KGFDVECEMMKSIRHRNLIKV--ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQ 271
+ F E +++K++ ++K +S + LV+EY+P G L ++ LD +
Sbjct: 69 RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASR 128
Query: 272 RLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT-GEDQSM 330
L + +EYL S +H DL N+L++ ++DF +AKLL +D +
Sbjct: 129 LLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV 185
Query: 331 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 370
+ + I + APE + S DV+SFG++L E FT
Sbjct: 186 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 130/289 (44%), Gaps = 36/289 (12%)
Query: 179 NLIGRGGFGSVYKA--RLGDGMEVAVKVFNLQCG---RALKGFDVECEMMKSIRHRNLIK 233
+IG G FG V +L E+ V + L+ G + + F E +M H N+I
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAP 293
+ + ++ E+M +GSL+ ++ ++ + Q + ++ +A+ ++YL
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA---DMN 129
Query: 294 IIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA---TIGYMAPEYGREG 350
+H L N+L++ N+V +SDF +++ L + T T L I + APE +
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR 189
Query: 351 RVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
+ ++ DV+S+GI++ E + G++P +W ++ +V+ A ++
Sbjct: 190 KFTSASDVWSYGIVMWEVMSYGERP------------YW-----DMTNQDVINA---IEQ 229
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRN 458
D C S + L ++C + R +IV L D ++RN
Sbjct: 230 DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL----DKMIRN 274
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 12/208 (5%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV-----ECEMMKSI 226
+ F ++G G F +V AR L E A+K+ L+ +K V E ++M +
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 94
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
H +K+ ++E L Y +G L KY+ + R ++ SALEYL
Sbjct: 95 DHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 153
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H IIH DLKP N+LL+++M ++DF AK+L+ E + + T Y++PE
Sbjct: 154 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 210
Query: 347 GREGRVSTNGDVYSFGIMLMETFTGKKP 374
E + D+++ G ++ + G P
Sbjct: 211 LTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 181 IGRGGFGSVY-----KARLGDGMEVAVKVFNLQCG-RALKGFDVECEMMKSIRHRNLIKV 234
+G G FG V G G VAVK G + G+ E ++++++ H ++IK
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 235 ISTCSNEEFKAL--VLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
C + +L V+EY+P GSL Y+ + + + Q L + + YLH +
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL--PRHSIGLAQLLLFAQQICEGMAYLH---AQ 153
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT-GEDQSMTQTQTLATIGYMAPEYGREGR 351
IH DL NVLLD++ + + DF +AK + G + + + + + APE +E +
Sbjct: 154 HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYK 213
Query: 352 VSTNGDVYSFGIMLMETFT 370
DV+SFG+ L E T
Sbjct: 214 FYYASDVWSFGVTLYELLT 232
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 98/199 (49%), Gaps = 12/199 (6%)
Query: 181 IGRGGFGSVYKARL---GD--GMEVAVKVFNLQCG-RALKGFDVECEMMKSIRHRNLIKV 234
+G G FG V R GD G +VAVK + G + E E+++++ H N++K
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 235 ISTCSNEEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
C+ + L++E++P GSL++Y+ + +++ Q+L + + ++YL S
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SR 133
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL-TGEDQSMTQTQTLATIGYMAPEYGREGR 351
+H DL NVL++ + DF + K + T ++ + + + + APE + +
Sbjct: 134 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK 193
Query: 352 VSTNGDVYSFGIMLMETFT 370
DV+SFG+ L E T
Sbjct: 194 FYIASDVWSFGVTLHELLT 212
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 112/220 (50%), Gaps = 25/220 (11%)
Query: 163 FSHLELCRATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVFNLQ-C--GRALKGFDV 218
F H E+ RA IG+G FG V + D ++ A+K N Q C ++
Sbjct: 14 FDHFEILRA---------IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK 64
Query: 219 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMID 278
E ++M+ + H L+ + + +EE +V++ + G L ++ + + + +L + +
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL-FICE 123
Query: 279 VASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA- 337
+ AL+YL + IIH D+KP N+LLD++ H++DF+IA +L E TQ T+A
Sbjct: 124 LVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE----TQITTMAG 176
Query: 338 TIGYMAPEY--GREGR-VSTNGDVYSFGIMLMETFTGKKP 374
T YMAPE R+G S D +S G+ E G++P
Sbjct: 177 TKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 38/260 (14%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240
+G G FG V+ A +VAVK +++ F E +MK+++H L+K+ + +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 248
Query: 241 EEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL-EYLHFGYSAPIIHCDL 299
E ++ E+M GSL ++ S Q L +ID ++ + E + F IH DL
Sbjct: 249 EPI-YIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 304
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVY 359
+ +N+L+ ++V ++DF +A++ I + APE G + DV+
Sbjct: 305 RAANILVSASLVCKIADFGLARV-----------GAKFPIKWTAPEAINFGSFTIKSDVW 353
Query: 360 SFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQ 418
SFGI+LME T G+ P + N E+ I +E E
Sbjct: 354 SFGILLMEIVTYGRIPYPGMSNPEV-----------IRALE---------RGYRMPRPEN 393
Query: 419 CVSCVFNLAMECTVESPEQR 438
C ++N+ M C PE+R
Sbjct: 394 CPEELYNIMMRCWKNRPEER 413
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 108/212 (50%), Gaps = 10/212 (4%)
Query: 179 NLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RALKGFDVECEMMKSIRHRNLIK 233
+IG G FG V RL E+ V + L+ G + + F E +M H N+I
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 94
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAP 293
+ + + ++ EYM +GSL+ ++ ++ + Q + ++ + S ++YL
Sbjct: 95 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMS 151
Query: 294 IIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ-TLATIGYMAPEYGREGRV 352
+H DL N+L++ N+V +SDF ++++L + ++ T+ I + APE +
Sbjct: 152 AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 211
Query: 353 STNGDVYSFGIMLMETFT-GKKPTNEIFNGEM 383
++ DV+S+GI++ E + G++P ++ N ++
Sbjct: 212 TSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 243
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 16/215 (7%)
Query: 169 CRATDGFSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRALKGFDV 218
C+ F E +L +G+G FGSV R LGD G VAVK + F
Sbjct: 1 CQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR 60
Query: 219 ECEMMKSIRHRNLIKV--ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIM 276
E +++K++ ++K +S + LV+EY+P G L ++ LD + L
Sbjct: 61 EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS 120
Query: 277 IDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT-GEDQSMTQTQT 335
+ +EYL S +H DL N+L++ ++DF +AKLL +D + +
Sbjct: 121 SQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPG 177
Query: 336 LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 370
+ I + APE + S DV+SFG++L E FT
Sbjct: 178 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 98/199 (49%), Gaps = 12/199 (6%)
Query: 181 IGRGGFGSVYKARL---GD--GMEVAVKVFNLQCG-RALKGFDVECEMMKSIRHRNLIKV 234
+G G FG V R GD G +VAVK + G + E E+++++ H N++K
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 235 ISTCSNEEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
C+ + L++E++P GSL++Y+ + +++ Q+L + + ++YL S
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SR 145
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL-TGEDQSMTQTQTLATIGYMAPEYGREGR 351
+H DL NVL++ + DF + K + T ++ + + + + APE + +
Sbjct: 146 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK 205
Query: 352 VSTNGDVYSFGIMLMETFT 370
DV+SFG+ L E T
Sbjct: 206 FYIASDVWSFGVTLHELLT 224
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 108/212 (50%), Gaps = 10/212 (4%)
Query: 179 NLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RALKGFDVECEMMKSIRHRNLIK 233
+IG G FG V RL E+ V + L+ G + + F E +M H N+I
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAP 293
+ + + ++ EYM +GSL+ ++ ++ + Q + ++ + S ++YL
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMS 130
Query: 294 IIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ-TLATIGYMAPEYGREGRV 352
+H DL N+L++ N+V +SDF ++++L + ++ T+ I + APE +
Sbjct: 131 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 190
Query: 353 STNGDVYSFGIMLMETFT-GKKPTNEIFNGEM 383
++ DV+S+GI++ E + G++P ++ N ++
Sbjct: 191 TSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 27/211 (12%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAL-----KGFDVECEMMKSIRHRNLIKV 234
+G GGFG V + D G +VA+K QC + L + + +E ++MK + H N++
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIK----QCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 78
Query: 235 ------ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQR--LNIMIDVASALEYL 286
+ + + L +EY G L KY+ + + ++ D++SAL YL
Sbjct: 79 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 138
Query: 287 HFGYSAPIIHCDLKPSNVLLD---DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
H IIH DLKP N++L ++ + D AK L DQ T+ + T+ Y+A
Sbjct: 139 HENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYLA 192
Query: 344 PEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
PE + + + D +SFG + E TG +P
Sbjct: 193 PELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 27/211 (12%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRAL-----KGFDVECEMMKSIRHRNLIKV 234
+G GGFG V + D G +VA+K QC + L + + +E ++MK + H N++
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIK----QCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 77
Query: 235 ------ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQR--LNIMIDVASALEYL 286
+ + + L +EY G L KY+ + + ++ D++SAL YL
Sbjct: 78 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 137
Query: 287 HFGYSAPIIHCDLKPSNVLLD---DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
H IIH DLKP N++L ++ + D AK L DQ T+ + T+ Y+A
Sbjct: 138 HENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYLA 191
Query: 344 PEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
PE + + + D +SFG + E TG +P
Sbjct: 192 PELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 108/212 (50%), Gaps = 10/212 (4%)
Query: 179 NLIGRGGFGSVYKARLG--DGMEVAVKVFNLQCG---RALKGFDVECEMMKSIRHRNLIK 233
+IG G FG V RL E+ V + L+ G + + F E +M H N+I
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAP 293
+ + + ++ EYM +GSL+ ++ ++ + Q + ++ + S ++YL
Sbjct: 80 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMS 136
Query: 294 IIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ-TLATIGYMAPEYGREGRV 352
+H DL N+L++ N+V +SDF ++++L + ++ T+ I + APE +
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 196
Query: 353 STNGDVYSFGIMLMETFT-GKKPTNEIFNGEM 383
++ DV+S+GI++ E + G++P ++ N ++
Sbjct: 197 TSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 228
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 122/292 (41%), Gaps = 36/292 (12%)
Query: 181 IGRGGFGSV----YKARLGDGMEVAVKVFN---LQCGRALKGFDVECEMMKSIRHRNLIK 233
+G G FG V + A G + VAVK L A+ F E M S+ HRNLI+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYM--YSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ K +V E P GSL + + +++L R + VA + YL S
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 133
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL-TGEDQSMTQTQTLATIGYMAPEYGREG 350
IH DL N+LL + + DF + + L +D + Q + APE +
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 351 RVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
S D + FG+ L E FT G++P W+ ++ +++ + + +E
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEP-----------------WIGLNGSQIL--HKIDKE 234
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRNVGD 461
E C ++N+ ++C PE R + LL+ + + +R + D
Sbjct: 235 GERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMRALQD 286
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 173 DGFSENNLIGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RALKGFDVECEMM 223
D + +G G FG V K + + + VAVK+ + L E EMM
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 224 KSI-RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSS-----NYILDI-------- 269
K I +H+N+I ++ C+ + +++EY G+L +Y+ + Y DI
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 270 -FQRL-NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327
F+ L + +A +EYL S IH DL NVL+ +N V ++DF +A+ + D
Sbjct: 155 TFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 370
T + +MAPE + + DV+SFG+++ E FT
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 175 FSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRALKGFDVECEMMK 224
F E +L +G+G FGSV R LGD G VAVK + F E +++K
Sbjct: 8 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 67
Query: 225 SIRHRNLIKV--ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASA 282
++ ++K +S + LV+EY+P G L ++ LD + L +
Sbjct: 68 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 127
Query: 283 LEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT-GEDQSMTQTQTLATIGY 341
+EYL S +H DL N+L++ ++DF +AKLL +D + + + I +
Sbjct: 128 MEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 184
Query: 342 MAPEYGREGRVSTNGDVYSFGIMLMETFT 370
APE + S DV+SFG++L E FT
Sbjct: 185 YAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 104/198 (52%), Gaps = 11/198 (5%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-ALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G FG V+ + +VAVK L+ G +++ F E +MK+++H L+++ + +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVK--TLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRL-NIMIDVASALEYLHFGYSAPIIHCD 298
EE ++ E+M GSL ++ S + +L + +A + Y+ IH D
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRD 134
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGD 357
L+ +NVL+ ++++ ++DF +A+++ ED T + I + APE G + +
Sbjct: 135 LRAANVLVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSN 192
Query: 358 VYSFGIMLMETFT-GKKP 374
V+SFGI+L E T GK P
Sbjct: 193 VWSFGILLYEIVTYGKIP 210
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 16/209 (7%)
Query: 175 FSENNL-----IGRGGFGSVYKAR---LGD--GMEVAVKVFNLQCGRALKGFDVECEMMK 224
F E +L +G+G FGSV R LGD G VAVK + F E +++K
Sbjct: 4 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 63
Query: 225 SIRHRNLIKV--ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASA 282
++ ++K +S LV+EY+P G L ++ LD + L +
Sbjct: 64 ALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 123
Query: 283 LEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT-GEDQSMTQTQTLATIGY 341
+EYL S +H DL N+L++ ++DF +AKLL +D + + + I +
Sbjct: 124 MEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFW 180
Query: 342 MAPEYGREGRVSTNGDVYSFGIMLMETFT 370
APE + S DV+SFG++L E FT
Sbjct: 181 YAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 112/269 (41%), Gaps = 36/269 (13%)
Query: 181 IGRGGFGSV----YKARLGDGMEVAVKVFN---LQCGRALKGFDVECEMMKSIRHRNLIK 233
+G G FG V + A G + VAVK L A+ F E M S+ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYM--YSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ K +V E P GSL + + +++L R + VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 129
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL-TGEDQSMTQTQTLATIGYMAPEYGREG 350
IH DL N+LL + + DF + + L +D + Q + APE +
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 189
Query: 351 RVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
S D + FG+ L E FT G++P W+ ++ +++ + + +E
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP-----------------WIGLNGSQIL--HKIDKE 230
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQR 438
E C ++N+ ++C PE R
Sbjct: 231 GERLPRPEDCPQDIYNVMVQCWAHKPEDR 259
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 173 DGFSENNLIGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RALKGFDVECEMM 223
D + +G G FG V K + + + VAVK+ + L E EMM
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 224 KSI-RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSS-----NYILDI-------- 269
K I +H+N+I ++ C+ + +++EY G+L +Y+ + Y DI
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 270 -FQRL-NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327
F+ L + +A +EYL S IH DL NVL+ +N V ++DF +A+ + D
Sbjct: 155 TFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLARDINNID 211
Query: 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 370
T + +MAPE + + DV+SFG+++ E FT
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 112/269 (41%), Gaps = 36/269 (13%)
Query: 181 IGRGGFGSV----YKARLGDGMEVAVKVFN---LQCGRALKGFDVECEMMKSIRHRNLIK 233
+G G FG V + A G + VAVK L A+ F E M S+ HRNLI+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYM--YSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ K +V E P GSL + + +++L R + VA + YL S
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 139
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL-TGEDQSMTQTQTLATIGYMAPEYGREG 350
IH DL N+LL + + DF + + L +D + Q + APE +
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 199
Query: 351 RVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
S D + FG+ L E FT G++P W+ ++ +++ + + +E
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEP-----------------WIGLNGSQIL--HKIDKE 240
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQR 438
E C ++N+ ++C PE R
Sbjct: 241 GERLPRPEDCPQDIYNVMVQCWAHKPEDR 269
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 173 DGFSENNLIGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RALKGFDVECEMM 223
D + +G G FG V K + + + VAVK+ + L E EMM
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 224 KSI-RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSS-----NYILDI-------- 269
K I +H+N+I ++ C+ + +++EY G+L +Y+ + Y DI
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 270 -FQRL-NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327
F+ L + +A +EYL S IH DL NVL+ +N V ++DF +A+ + D
Sbjct: 155 TFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 370
T + +MAPE + + DV+SFG+++ E FT
Sbjct: 212 YYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 114/266 (42%), Gaps = 26/266 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G +GSVYKA G VA+K ++ L+ E +M+ +++K +
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
+V+EY GS+ + N L + I+ LEYLHF IH D+
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IHRDI 151
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVY 359
K N+LL+ A L+DF +A LT D + + T +MAPE +E + D++
Sbjct: 152 KAGNILLNTEGHAKLADFGVAGQLT--DXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIW 209
Query: 360 SFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQC 419
S GI +E GK P +I P+ + ++ N F E
Sbjct: 210 SLGITAIEMAEGKPPYADIH--------------PMRAIFMIPTNPPPT----FRKPELW 251
Query: 420 VSCVFNLAMECTVESPEQRINAREIV 445
+ +C V+SPEQR A +++
Sbjct: 252 SDNFTDFVKQCLVKSPEQRATATQLL 277
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 129/296 (43%), Gaps = 30/296 (10%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTC 238
IG GGF V A + G VA+K+ + G L E E +K++RH+++ ++
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 239 SNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
+VLEY P G L Y+ S + + + R+ + + SA+ Y+H S H D
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVSAVAYVH---SQGYAHRD 133
Query: 299 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR-EGRVSTNGD 357
LKP N+L D+ L DF + G QT ++ Y APE + + + + D
Sbjct: 134 LKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT-CCGSLAYAAPELIQGKSYLGSEAD 192
Query: 358 VYSFGIMLMETFTGKKPTNE-----IFNGEMTLKHWVNDWLPISTM-------------E 399
V+S GI+L G P ++ ++ M K+ V WL S++
Sbjct: 193 VWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQVDPKKR 252
Query: 400 VVGANLLSQ----EDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKI 451
+ NLL+ +D ++ + Q + +L +C E N R+ + L+ +
Sbjct: 253 ISMKNLLNHPWIMQDYNYPVEWQSKNPFIHLDDDCVTELSVHHRNNRQTMEDLISL 308
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 173 DGFSENNLIGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RALKGFDVECEMM 223
D + +G G FG V K + + + VAVK+ + L E EMM
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 224 KSI-RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSS-----NYILDI-------- 269
K I +H+N+I ++ C+ + +++EY G+L +Y+ + Y DI
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 270 -FQRL-NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327
F+ L + +A +EYL S IH DL NVL+ +N V ++DF +A+ + D
Sbjct: 155 TFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 370
T + +MAPE + + DV+SFG+++ E FT
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 173 DGFSENNLIGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RALKGFDVECEMM 223
D + +G G FG V K + + + VAVK+ + L E EMM
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 224 KSI-RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSS-----NYILDI-------- 269
K I +H+N+I ++ C+ + +++EY G+L +Y+ + Y DI
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 270 -FQRL-NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327
F+ L + +A +EYL S IH DL NVL+ +N V ++DF +A+ + D
Sbjct: 155 TFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 370
T + +MAPE + + DV+SFG+++ E FT
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 112/269 (41%), Gaps = 36/269 (13%)
Query: 181 IGRGGFGSV----YKARLGDGMEVAVKVFN---LQCGRALKGFDVECEMMKSIRHRNLIK 233
+G G FG V + A G + VAVK L A+ F E M S+ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYM--YSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ K +V E P GSL + + +++L R + VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 129
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL-TGEDQSMTQTQTLATIGYMAPEYGREG 350
IH DL N+LL + + DF + + L +D + Q + APE +
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 351 RVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
S D + FG+ L E FT G++P W+ ++ +++ + + +E
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP-----------------WIGLNGSQIL--HKIDKE 230
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQR 438
E C ++N+ ++C PE R
Sbjct: 231 GERLPRPEDCPQDIYNVMVQCWAHKPEDR 259
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 173 DGFSENNLIGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RALKGFDVECEMM 223
D + +G G FG V K + + + VAVK+ + L E EMM
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 224 KSI-RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYM-----------YSSNYILD--- 268
K I +H+N+I ++ C+ + +++EY G+L +Y+ Y N + +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 269 IFQRL-NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327
F+ L + +A +EYL S IH DL NVL+ +N V ++DF +A+ + D
Sbjct: 155 TFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 370
T + +MAPE + + DV+SFG+++ E FT
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 112/269 (41%), Gaps = 36/269 (13%)
Query: 181 IGRGGFGSV----YKARLGDGMEVAVKVFN---LQCGRALKGFDVECEMMKSIRHRNLIK 233
+G G FG V + A G + VAVK L A+ F E M S+ HRNLI+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYM--YSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ K +V E P GSL + + +++L R + VA + YL S
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 139
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL-TGEDQSMTQTQTLATIGYMAPEYGREG 350
IH DL N+LL + + DF + + L +D + Q + APE +
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 199
Query: 351 RVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
S D + FG+ L E FT G++P W+ ++ +++ + + +E
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEP-----------------WIGLNGSQIL--HKIDKE 240
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQR 438
E C ++N+ ++C PE R
Sbjct: 241 GERLPRPEDCPQDIYNVMVQCWAHKPEDR 269
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 112/269 (41%), Gaps = 36/269 (13%)
Query: 181 IGRGGFGSV----YKARLGDGMEVAVKVFN---LQCGRALKGFDVECEMMKSIRHRNLIK 233
+G G FG V + A G + VAVK L A+ F E M S+ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYM--YSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ K +V E P GSL + + +++L R + VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 129
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL-TGEDQSMTQTQTLATIGYMAPEYGREG 350
IH DL N+LL + + DF + + L +D + Q + APE +
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 351 RVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
S D + FG+ L E FT G++P W+ ++ +++ + + +E
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP-----------------WIGLNGSQIL--HKIDKE 230
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQR 438
E C ++N+ ++C PE R
Sbjct: 231 GERLPRPEDCPQDIYNVMVQCWAHKPEDR 259
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 112/269 (41%), Gaps = 36/269 (13%)
Query: 181 IGRGGFGSV----YKARLGDGMEVAVKVFN---LQCGRALKGFDVECEMMKSIRHRNLIK 233
+G G FG V + A G + VAVK L A+ F E M S+ HRNLI+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYM--YSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ K +V E P GSL + + +++L R + VA + YL S
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 133
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL-TGEDQSMTQTQTLATIGYMAPEYGREG 350
IH DL N+LL + + DF + + L +D + Q + APE +
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 351 RVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
S D + FG+ L E FT G++P W+ ++ +++ + + +E
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEP-----------------WIGLNGSQIL--HKIDKE 234
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQR 438
E C ++N+ ++C PE R
Sbjct: 235 GERLPRPEDCPQDIYNVMVQCWAHKPEDR 263
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 173 DGFSENNLIGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RALKGFDVECEMM 223
D + +G G FG V K + + + VAVK+ + L E EMM
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 224 KSI-RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSS-----NYILDI-------- 269
K I +H+N+I ++ C+ + +++EY G+L +Y+ + Y DI
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 270 -FQRL-NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327
F+ L + +A +EYL S IH DL NVL+ +N V ++DF +A+ + D
Sbjct: 201 TFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 257
Query: 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 370
T + +MAPE + + DV+SFG+++ E FT
Sbjct: 258 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 28/223 (12%)
Query: 173 DGFSENNLIGRGGFGSVY--------KARLGDGMEVAVKVFNLQCGRA-LKGFDVECEMM 223
D + +G G FG V K + + + VAVK+ L E EMM
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 224 KSI-RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSS-----NYILDI-------- 269
K I +H+N+I ++ C+ + +++EY G+L +Y+ + Y DI
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 270 -FQRL-NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327
F+ L + +A +EYL S IH DL NVL+ +N V ++DF +A+ + D
Sbjct: 155 TFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 370
T + +MAPE + + DV+SFG+++ E FT
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 173 DGFSENNLIGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RALKGFDVECEMM 223
D + +G G FG V K + + + VAVK+ + L E EMM
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 224 KSI-RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSS-----NYILDI-------- 269
K I +H+N+I ++ C+ + +++EY G+L +Y+ + Y DI
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 270 -FQRL-NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327
F+ L + +A +EYL S IH DL NVL+ +N V ++DF +A+ + D
Sbjct: 142 TFKDLVSCTYQLARGMEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLARDINNID 198
Query: 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 370
T + +MAPE + + DV+SFG+++ E FT
Sbjct: 199 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 173 DGFSENNLIGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RALKGFDVECEMM 223
D + +G G FG V K + + + VAVK+ + L E EMM
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 224 KSI-RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSS-----NYILDI-------- 269
K I +H+N+I ++ C+ + +++EY G+L +Y+ + Y DI
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 270 -FQRL-NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327
F+ L + +A +EYL S IH DL NVL+ +N V ++DF +A+ + D
Sbjct: 147 TFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 203
Query: 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 370
T + +MAPE + + DV+SFG+++ E FT
Sbjct: 204 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 173 DGFSENNLIGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RALKGFDVECEMM 223
D + +G G FG V K + + + VAVK+ + L E EMM
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 224 KSI-RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSS-----NYILDI-------- 269
K I +H+N+I ++ C+ + +++EY G+L +Y+ + Y DI
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 270 -FQRL-NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327
F+ L + +A +EYL S IH DL NVL+ +N V ++DF +A+ + D
Sbjct: 144 TFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 200
Query: 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 370
T + +MAPE + + DV+SFG+++ E FT
Sbjct: 201 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDVECEMMK 224
LE D + ++G+G +G VY R L + + +A+K + R + E + K
Sbjct: 1 LEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK 60
Query: 225 SIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSS-NYILDIFQRLNIMI-DVASA 282
++H+N+++ + + S F + +E +P GSL + S + D Q + +
Sbjct: 61 HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG 120
Query: 283 LEYLHFGYSAPIIHCDLKPSNVLLDD-NMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGY 341
L+YLH I+H D+K NVL++ + V +SDF +K L G + T+T T T+ Y
Sbjct: 121 LKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-PCTETFT-GTLQY 175
Query: 342 MAPEYGREGR--VSTNGDVYSFGIMLMETFTGKKPTNEI 378
MAPE +G D++S G ++E TGK P E+
Sbjct: 176 MAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL 214
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 130/304 (42%), Gaps = 49/304 (16%)
Query: 178 NNLIGRGGFGSVYKARLGDG----MEVAVKVFN-LQCGRALKGFDVECEMMKSIRHRNLI 232
+ +IG+G FG VY D ++ A+K + + + ++ F E +M+ + H N++
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 233 KVIST-CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+I E ++L YM HG L +++ S + ++ + VA +EYL
Sbjct: 86 ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL---AE 142
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA--TIGYMAPEYGRE 349
+H DL N +LD++ ++DF +A+ + + Q A + + A E +
Sbjct: 143 QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQT 202
Query: 350 GRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ 408
R +T DV+SFG++L E T G P I ++T
Sbjct: 203 YRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLT------------------------ 238
Query: 409 EDIHFVAK-------EQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRNVGD 461
HF+A+ E C ++ + +C P R R +V ++ +I +LL GD
Sbjct: 239 ---HFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL---GD 292
Query: 462 RCIR 465
++
Sbjct: 293 HYVQ 296
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDVECEMMK 224
LE D + ++G+G +G VY R L + + +A+K + R + E + K
Sbjct: 15 LEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK 74
Query: 225 SIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSS-NYILDIFQRLNIMI-DVASA 282
++H+N+++ + + S F + +E +P GSL + S + D Q + +
Sbjct: 75 HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG 134
Query: 283 LEYLHFGYSAPIIHCDLKPSNVLLDD-NMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGY 341
L+YLH I+H D+K NVL++ + V +SDF +K L G + T+T T T+ Y
Sbjct: 135 LKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-PCTETFT-GTLQY 189
Query: 342 MAPEYGREGR--VSTNGDVYSFGIMLMETFTGKKPTNEI 378
MAPE +G D++S G ++E TGK P E+
Sbjct: 190 MAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL 228
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 102/223 (45%), Gaps = 28/223 (12%)
Query: 173 DGFSENNLIGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RALKGFDVECEMM 223
D + +G G FG V K + + + VAVK+ + L E EMM
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 224 KSI-RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSS-----NYILDI-------- 269
K I +H+N+I ++ C+ + +++ Y G+L +Y+ + Y DI
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 270 -FQRL-NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327
F+ L + +A +EYL S IH DL NVL+ +N V ++DF +A+ + D
Sbjct: 155 TFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 370
T + +MAPE + + DV+SFG+++ E FT
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 117/277 (42%), Gaps = 31/277 (11%)
Query: 178 NNLIGRGGFGSVYKA----RLGDGMEVAVKVFNLQCGRALK-GFDVECEMMKSIRHRNLI 232
N ++G G FG VY+ G+ + VAVK C K F E +MK++ H +++
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 233 KVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
K+I EE +++E P+G L Y+ + L + + + + A+ YL S
Sbjct: 89 KLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SI 144
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV 352
+H D+ N+L+ L DF +++ + ED L I +M+PE R
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRF 203
Query: 353 STNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDI 411
+T DV+ F + + E + GK+P W+ + I +E + L + D+
Sbjct: 204 TTASDVWMFAVCMWEILSFGKQPF-----------FWLENKDVIGVLE--KGDRLPKPDL 250
Query: 412 HFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
C ++ L C P R E+V L
Sbjct: 251 -------CPPVLYTLMTRCWDYDPSDRPRFTELVCSL 280
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 117/277 (42%), Gaps = 31/277 (11%)
Query: 178 NNLIGRGGFGSVYKA----RLGDGMEVAVKVFNLQCGRALK-GFDVECEMMKSIRHRNLI 232
N ++G G FG VY+ G+ + VAVK C K F E +MK++ H +++
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 233 KVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
K+I EE +++E P+G L Y+ + L + + + + A+ YL S
Sbjct: 73 KLIGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SI 128
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV 352
+H D+ N+L+ L DF +++ + ED L I +M+PE R
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRF 187
Query: 353 STNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDI 411
+T DV+ F + + E + GK+P W+ + I +E + L + D+
Sbjct: 188 TTASDVWMFAVCMWEILSFGKQPF-----------FWLENKDVIGVLE--KGDRLPKPDL 234
Query: 412 HFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
C ++ L C P R E+V L
Sbjct: 235 -------CPPVLYTLMTRCWDYDPSDRPRFTELVCSL 264
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 181 IGRGGFGSVYKAR-LGDGMEVAVK---VFNLQCGRALKGFDVECEMMKSIRHRNLIKVIS 236
IGRG F VY+A L DG+ VA+K +F+L +A E +++K + H N+IK +
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 237 TCSNEEFKALVLEYMPHGSLE---KYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAP 293
+ + +VLE G L K+ ++ + + SALE++H S
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRR 156
Query: 294 IIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS 353
++H D+KP+NV + V L D + + + ++ + T YM+PE E +
Sbjct: 157 VMHRDIKPANVFITATGVVKLGDLGLGRFFSS--KTTAAHSLVGTPYYMSPERIHENGYN 214
Query: 354 TNGDVYSFGIMLMETFTGKKP 374
D++S G +L E + P
Sbjct: 215 FKSDIWSLGCLLYEMAALQSP 235
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 117/277 (42%), Gaps = 31/277 (11%)
Query: 178 NNLIGRGGFGSVYKA----RLGDGMEVAVKVFNLQCGRALK-GFDVECEMMKSIRHRNLI 232
N ++G G FG VY+ G+ + VAVK C K F E +MK++ H +++
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 233 KVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
K+I EE +++E P+G L Y+ + L + + + + A+ YL S
Sbjct: 77 KLIGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SI 132
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV 352
+H D+ N+L+ L DF +++ + ED L I +M+PE R
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRF 191
Query: 353 STNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDI 411
+T DV+ F + + E + GK+P W+ + I +E + L + D+
Sbjct: 192 TTASDVWMFAVCMWEILSFGKQPF-----------FWLENKDVIGVLE--KGDRLPKPDL 238
Query: 412 HFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
C ++ L C P R E+V L
Sbjct: 239 -------CPPVLYTLMTRCWDYDPSDRPRFTELVCSL 268
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 39/236 (16%)
Query: 175 FSENNL-----IGRGGFGSVYKARLGDGME------VAVKVFNLQCGRALKG-FDVECEM 222
+ NN+ IG G FG V++AR + VAVK+ + ++ F E +
Sbjct: 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAAL 103
Query: 223 MKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNY----------------- 265
M + N++K++ C+ + L+ EYM +G L +++ S +
Sbjct: 104 MAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 163
Query: 266 ------ILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSI 319
L ++L I VA+ + YL +H DL N L+ +NMV ++DF +
Sbjct: 164 SSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGL 220
Query: 320 AKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 374
++ + D I +M PE R +T DV+++G++L E F+ G +P
Sbjct: 221 SRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 276
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 130/305 (42%), Gaps = 49/305 (16%)
Query: 173 DGFSENNLIGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RALKGFDVECEMM 223
D + +G G FG V K + + + VAVK+ + L E EMM
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 224 KSI-RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSS-----NYILDI-------- 269
K I +H+N+I ++ C+ + +++ Y G+L +Y+ + Y DI
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 270 -FQRL-NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327
F+ L + +A +EYL S IH DL NVL+ +N V ++DF +A+ + D
Sbjct: 155 TFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLK 386
T + +MAPE + + DV+SFG+++ E FT G P + G
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP----YPG----- 262
Query: 387 HWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVA 446
+P+ + L +E C + ++ + +C P QR +++V
Sbjct: 263 ------IPVEEL-----FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 447 KLLKI 451
L +I
Sbjct: 312 DLDRI 316
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 125/294 (42%), Gaps = 40/294 (13%)
Query: 179 NLIGRGGFGSVYKARL----GDGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRHRNLI 232
++G G FGSV + L G ++VAVK L R ++ F E MK H N+I
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 233 KVISTCSNEEFKAL-----VLEYMPHGSLEKYMYSSNY-----ILDIFQRLNIMIDVASA 282
+++ C + + +L +M +G L Y+ S + + L M+D+A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 283 LEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
+EYL + +H DL N +L D+M ++DF ++K + D + ++
Sbjct: 160 MEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 343 APEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVV 401
A E + ++ DV++FG+ + E T G P + N EM D+L +
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMY------DYL------LH 264
Query: 402 GANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSL 455
G L ED C+ ++ + C P R + +L K+ +SL
Sbjct: 265 GHRLKQPED--------CLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 129/291 (44%), Gaps = 46/291 (15%)
Query: 181 IGRGGFGSVYKARL-----GDGME-VAVKVFNLQCGRALKG-FDVECEMMKSIRHRNLIK 233
+G FG VYK L G+ + VA+K + L+ F E + ++H N++
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQR---------------LNIMID 278
++ + ++ +++ Y HG L +++ + D+ ++++
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 279 VASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLAT 338
+A+ +EYL S ++H DL NVL+ D + +SD + + + D +L
Sbjct: 154 IAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 339 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPIST 397
I +MAPE G+ S + D++S+G++L E F+ G +P + S
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP-----------------YCGYSN 253
Query: 398 MEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
+VV ++ + + C + V+ L +EC E P +R ++I ++L
Sbjct: 254 QDVV--EMIRNRQV-LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 301
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 124/302 (41%), Gaps = 59/302 (19%)
Query: 181 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RALKGFDVECEMMKSI-RHRN 230
+G G FG V K + +VAVK+ + L E EMMK I +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYM---------YSSNYILDIFQRLN------I 275
+I ++ C+ + +++EY G+L +Y+ YS N + ++L+
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 276 MIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT 335
VA +EYL S IH DL NVL+ ++ V ++DF +A+ + D T
Sbjct: 197 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 336 LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT------GKKPTNEIFNGEMTLKHWV 389
+ +MAPE + + DV+SFG++L E FT P E+F
Sbjct: 254 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--------- 304
Query: 390 NDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLL 449
L +E C + ++ + +C P QR +++V L
Sbjct: 305 ----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 348
Query: 450 KI 451
+I
Sbjct: 349 RI 350
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 129/291 (44%), Gaps = 46/291 (15%)
Query: 181 IGRGGFGSVYKARL-----GDGME-VAVKVFNLQCGRALKG-FDVECEMMKSIRHRNLIK 233
+G FG VYK L G+ + VA+K + L+ F E + ++H N++
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQR---------------LNIMID 278
++ + ++ +++ Y HG L +++ + D+ ++++
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 279 VASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLAT 338
+A+ +EYL S ++H DL NVL+ D + +SD + + + D +L
Sbjct: 137 IAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 339 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPIST 397
I +MAPE G+ S + D++S+G++L E F+ G +P + S
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP-----------------YCGYSN 236
Query: 398 MEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
+VV ++ + + C + V+ L +EC E P +R ++I ++L
Sbjct: 237 QDVV--EMIRNRQV-LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 284
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 124/302 (41%), Gaps = 59/302 (19%)
Query: 181 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RALKGFDVECEMMKSI-RHRN 230
+G G FG V K + +VAVK+ + L E EMMK I +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYM---------YSSNYILDIFQRLN------I 275
+I ++ C+ + +++EY G+L +Y+ YS N + ++L+
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 276 MIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT 335
VA +EYL S IH DL NVL+ ++ V ++DF +A+ + D T
Sbjct: 145 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 336 LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT------GKKPTNEIFNGEMTLKHWV 389
+ +MAPE + + DV+SFG++L E FT P E+F
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--------- 252
Query: 390 NDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLL 449
L +E C + ++ + +C P QR +++V L
Sbjct: 253 ----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 296
Query: 450 KI 451
+I
Sbjct: 297 RI 298
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 124/302 (41%), Gaps = 59/302 (19%)
Query: 181 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RALKGFDVECEMMKSI-RHRN 230
+G G FG V K + +VAVK+ + L E EMMK I +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYM---------YSSNYILDIFQRLN------I 275
+I ++ C+ + +++EY G+L +Y+ YS N + ++L+
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 276 MIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT 335
VA +EYL S IH DL NVL+ ++ V ++DF +A+ + D T
Sbjct: 148 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 336 LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT------GKKPTNEIFNGEMTLKHWV 389
+ +MAPE + + DV+SFG++L E FT P E+F
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--------- 255
Query: 390 NDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLL 449
L +E C + ++ + +C P QR +++V L
Sbjct: 256 ----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 299
Query: 450 KI 451
+I
Sbjct: 300 RI 301
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 124/302 (41%), Gaps = 59/302 (19%)
Query: 181 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RALKGFDVECEMMKSI-RHRN 230
+G G FG V K + +VAVK+ + L E EMMK I +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYM---------YSSNYILDIFQRLN------I 275
+I ++ C+ + +++EY G+L +Y+ YS N + ++L+
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 276 MIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT 335
VA +EYL S IH DL NVL+ ++ V ++DF +A+ + D T
Sbjct: 149 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 336 LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT------GKKPTNEIFNGEMTLKHWV 389
+ +MAPE + + DV+SFG++L E FT P E+F
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--------- 256
Query: 390 NDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLL 449
L +E C + ++ + +C P QR +++V L
Sbjct: 257 ----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 300
Query: 450 KI 451
+I
Sbjct: 301 RI 302
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 124/302 (41%), Gaps = 59/302 (19%)
Query: 181 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RALKGFDVECEMMKSI-RHRN 230
+G G FG V K + +VAVK+ + L E EMMK I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYM---------YSSNYILDIFQRLN------I 275
+I ++ C+ + +++EY G+L +Y+ YS N + ++L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 276 MIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT 335
VA +EYL S IH DL NVL+ ++ V ++DF +A+ + D T
Sbjct: 156 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 336 LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT------GKKPTNEIFNGEMTLKHWV 389
+ +MAPE + + DV+SFG++L E FT P E+F
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--------- 263
Query: 390 NDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLL 449
L +E C + ++ + +C P QR +++V L
Sbjct: 264 ----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Query: 450 KI 451
+I
Sbjct: 308 RI 309
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 124/302 (41%), Gaps = 59/302 (19%)
Query: 181 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RALKGFDVECEMMKSI-RHRN 230
+G G FG V K + +VAVK+ + L E EMMK I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYM---------YSSNYILDIFQRLN------I 275
+I ++ C+ + +++EY G+L +Y+ YS N + ++L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 276 MIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT 335
VA +EYL S IH DL NVL+ ++ V ++DF +A+ + D T
Sbjct: 156 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 336 LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT------GKKPTNEIFNGEMTLKHWV 389
+ +MAPE + + DV+SFG++L E FT P E+F
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--------- 263
Query: 390 NDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLL 449
L +E C + ++ + +C P QR +++V L
Sbjct: 264 ----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Query: 450 KI 451
+I
Sbjct: 308 RI 309
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 8/195 (4%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
IG+G G+VY A + G EVA++ NLQ + E +M+ ++ N++ + +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
+ +V+EY+ GSL + + +D Q + + ALE+LH S +IH D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 142
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVY 359
K N+LL + L+DF +T E +++ + T +MAPE D++
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSEMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 360 SFGIMLMETFTGKKP 374
S GIM +E G+ P
Sbjct: 201 SLGIMAIEMIEGEPP 215
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 132/309 (42%), Gaps = 46/309 (14%)
Query: 180 LIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKS--IRHRNLIKVIST 237
LIGRG +G+VYK L D VAVKVF+ + F E + + + H N+ + I
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFI-- 73
Query: 238 CSNEEFKA-------LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF-- 288
+E A LV+EY P+GSL KY+ S + D + V L YLH
Sbjct: 74 VGDERVTADGRMEYLLVMEYYPNGSLXKYL--SLHTSDWVSSCRLAHSVTRGLAYLHTEL 131
Query: 289 ----GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE------DQSMTQTQTLAT 338
Y I H DL NVL+ ++ +SDF ++ LTG ++ + T
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGT 191
Query: 339 IGYMAPEYGREGRVSTNG--------DVYSFGIMLMETF---TGKKPTNEIFNGEMTLKH 387
I YMAPE EG V+ D+Y+ G++ E F T P + +M +
Sbjct: 192 IRYMAPEV-LEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQT 250
Query: 388 WVNDWLPISTMEVVGANLLSQEDIHFVAKEQ--CVSCVFNLAMECTVESPEQRINAR--- 442
V + M+V+ + + KE V + +C + E R+ A+
Sbjct: 251 EVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAE 310
Query: 443 EIVAKLLKI 451
E +A+L+ I
Sbjct: 311 ERMAELMMI 319
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 25/236 (10%)
Query: 148 PSNDANMPSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAV-- 202
PS AN R F EL + ++G G FG+V+K G+ +++ V
Sbjct: 16 PSEKANK---VLARIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCI 65
Query: 203 KVFNLQCGRALKGFDVECEMM---KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKY 259
KV + GR + F + M S+ H ++++++ C + LV +Y+P GSL +
Sbjct: 66 KVIEDKSGR--QSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDH 122
Query: 260 MYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSI 319
+ L LN + +A + YL ++H +L NVLL ++DF +
Sbjct: 123 VRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGV 179
Query: 320 AKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 374
A LL +D+ + ++ I +MA E G+ + DV+S+G+ + E T G +P
Sbjct: 180 ADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 235
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 179 NLIGRGGFGSVYKARL---GDGMEVAV--KVFNLQCGRALKGFDVECEMM---KSIRHRN 230
++G G FG+V+K G+ +++ V KV + GR + F + M S+ H +
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR--QSFQAVTDHMLAIGSLDHAH 76
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGY 290
+++++ C + LV +Y+P GSL ++ L LN + +A + YL
Sbjct: 77 IVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE--- 132
Query: 291 SAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG 350
++H +L NVLL ++DF +A LL +D+ + ++ I +MA E G
Sbjct: 133 EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFG 192
Query: 351 RVSTNGDVYSFGIMLMETFT-GKKP 374
+ + DV+S+G+ + E T G +P
Sbjct: 193 KYTHQSDVWSYGVTVWELMTFGAEP 217
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 124/302 (41%), Gaps = 59/302 (19%)
Query: 181 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RALKGFDVECEMMKSI-RHRN 230
+G G FG V K + +VAVK+ + L E EMMK I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYM---------YSSNYILDIFQRLN------I 275
+I ++ C+ + +++EY G+L +Y+ +S N + ++L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 276 MIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT 335
VA +EYL S IH DL NVL+ ++ V ++DF +A+ + D T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 336 LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT------GKKPTNEIFNGEMTLKHWV 389
+ +MAPE + + DV+SFG++L E FT P E+F
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--------- 263
Query: 390 NDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLL 449
L +E C + ++ + +C P QR +++V L
Sbjct: 264 ----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Query: 450 KI 451
+I
Sbjct: 308 RI 309
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 185 GFGSVYKARLGD----GMEVAVKVFNLQCGRALK---GFDVECEMMKSIRHRNLIKVIST 237
G G+ K ++G+ G +VAVK+ N Q R+L E + +K RH ++IK+
Sbjct: 20 GVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV 79
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
S +V+EY+ G L Y+ + ++ R + + SA++Y H ++H
Sbjct: 80 ISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH---RHMVVHR 135
Query: 298 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG- 356
DLKP NVLLD +M A ++DF ++ +++ D +T + + Y APE GR+
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRT-SCGSPNYAAPEV-ISGRLYAGPE 191
Query: 357 -DVYSFGIMLMETFTGKKPTNE 377
D++S G++L G P ++
Sbjct: 192 VDIWSCGVILYALLCGTLPFDD 213
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 23/219 (10%)
Query: 175 FSENNL-----IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIR- 227
F NNL +G G FG V +A G G E AV ++ ++ D + +M ++
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 228 ------HRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVAS 281
H N++ ++ C++ ++ EY +G L ++ + +L+ I AS
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAS 162
Query: 282 ALEYLHFG----------YSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 331
+ LHF S IH D+ NVLL + VA + DF +A+ + + +
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 332 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 370
+ + +MAPE + + DV+S+GI+L E F+
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
IG+G G+VY A + G EVA++ NLQ + E +M+ ++ N++ + +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
+ +V+EY+ GSL + + +D Q + + ALE+LH S +IH D+
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 143
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVY 359
K N+LL + L+DF +T E ++ + T +MAPE D++
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGPKVDIW 201
Query: 360 SFGIMLMETFTGKKP 374
S GIM +E G+ P
Sbjct: 202 SLGIMAIEMIEGEPP 216
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 95/195 (48%), Gaps = 8/195 (4%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
IG+G G+VY A + G EVA++ NLQ + E +M+ ++ N++ + +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
+ +V+EY+ GSL + + +D Q + + ALE+LH S +IH D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 142
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVY 359
K N+LL + L+DF +T E QS T + T +MAPE D++
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPE-QSKRST-MVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 360 SFGIMLMETFTGKKP 374
S GIM +E G+ P
Sbjct: 201 SLGIMAIEMIEGEPP 215
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 100/208 (48%), Gaps = 17/208 (8%)
Query: 187 GSVYKARLGDGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRHRNLIKVISTCSNE--E 242
G ++K R G ++ VKV ++ R + F+ EC ++ H N++ V+ C +
Sbjct: 24 GELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 243 FKALVLEYMPHGSLEKYMYS-SNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKP 301
L+ +MP+GSL ++ +N+++D Q + +D+A + +LH I L
Sbjct: 83 HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH-TLEPLIPRHALNS 141
Query: 302 SNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTN---GDV 358
+V++D++M A +S + S + ++APE ++ TN D+
Sbjct: 142 RSVMIDEDMTARIS-------MADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADM 194
Query: 359 YSFGIMLMETFTGKKPTNEIFNGEMTLK 386
+SF ++L E T + P ++ N E+ +K
Sbjct: 195 WSFAVLLWELVTREVPFADLSNMEIGMK 222
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
IG+G G+VY A + G EVA++ NLQ + E +M+ ++ N++ + +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
+ +V+EY+ GSL + + +D Q + + ALE+LH S +IH D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 142
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVY 359
K N+LL + L+DF +T E ++ + T +MAPE D++
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 360 SFGIMLMETFTGKKP 374
S GIM +E G+ P
Sbjct: 201 SLGIMAIEMIEGEPP 215
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 181 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RALKGFDVECEMMKSI-RHRN 230
+G G FG V K + +VAVK+ + L E EMMK I +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYM---------YSSNYILDIFQRLN------I 275
+I ++ C+ + +++EY G+L +Y+ Y N + ++L+
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 276 MIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT 335
VA +EYL S IH DL NVL+ ++ V ++DF +A+ + D T
Sbjct: 141 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 336 LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 370
+ +MAPE + + DV+SFG++L E FT
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 122/286 (42%), Gaps = 39/286 (13%)
Query: 181 IGRGGFGSVYKARLGDGME------VAVKVFNLQCG-RALKGFDVECEMMKSIRHRNLIK 233
+G+G FG VY+ D ++ VAVK N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILD---------IFQRLNIMIDVASALE 284
++ S + +V+E M HG L+ Y+ S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 285 YLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
YL+ + +H DL N ++ + + DF + + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN 404
E ++G +T+ D++SFG++L E + + + + E LK V+
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 249
Query: 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLK 450
L Q D C V +L C +P+ R EIV LLK
Sbjct: 250 YLDQPD-------NCPERVTDLMRMCWQFNPKMRPTFLEIV-NLLK 287
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 123/302 (40%), Gaps = 59/302 (19%)
Query: 181 IGRGGFGSVY--------KARLGDGMEVAVKVFNLQCG-RALKGFDVECEMMKSI-RHRN 230
+G G FG V K + +VAVK+ + L E EMMK I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYM---------YSSNYILDIFQRLN------I 275
+I ++ C+ + +++EY G+L +Y+ Y N + ++L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 276 MIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT 335
VA +EYL S IH DL NVL+ ++ V ++DF +A+ + D T
Sbjct: 156 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 336 LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT------GKKPTNEIFNGEMTLKHWV 389
+ +MAPE + + DV+SFG++L E FT P E+F
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--------- 263
Query: 390 NDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLL 449
L +E C + ++ + +C P QR +++V L
Sbjct: 264 ----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Query: 450 KI 451
+I
Sbjct: 308 RI 309
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 122/286 (42%), Gaps = 39/286 (13%)
Query: 181 IGRGGFGSVYKARLGDGME------VAVKVFNLQCG-RALKGFDVECEMMKSIRHRNLIK 233
+G+G FG VY+ D ++ VAVK N R F E +MK ++++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILD---------IFQRLNIMIDVASALE 284
++ S + +V+E M HG L+ Y+ S + + + + + ++A +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 285 YLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
YL+ + +H DL N ++ + + DF + + + D + L + +MAP
Sbjct: 142 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN 404
E ++G +T+ D++SFG++L E + + + + E LK V+
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 246
Query: 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLK 450
L Q D C V +L C +P+ R EIV LLK
Sbjct: 247 YLDQPD-------NCPERVTDLMRMCWQFNPKMRPTFLEIV-NLLK 284
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 121/286 (42%), Gaps = 39/286 (13%)
Query: 181 IGRGGFGSVYKARLGDGME------VAVKVFNLQCG-RALKGFDVECEMMKSIRHRNLIK 233
+G+G FG VY+ D ++ VAVK N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILD---------IFQRLNIMIDVASALE 284
++ S + +V+E M HG L+ Y+ S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 285 YLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
YL+ + +H DL N ++ + + DF + + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN 404
E ++G +T+ D++SFG++L E + + + + E LK V+
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 249
Query: 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLK 450
L Q D C V +L C +P R EIV LLK
Sbjct: 250 YLDQPD-------NCPERVTDLMRMCWQFNPNMRPTFLEIV-NLLK 287
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 96/206 (46%), Gaps = 9/206 (4%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRH 228
+ F NL+G+G F VY+A + G+EVA+K+ + + ++ E ++ ++H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
+++++ + + + LVLE +G + +Y+ + + + M + + + YLH
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH- 129
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S I+H DL SN+LL NM ++DF +A L + T Y++PE
Sbjct: 130 --SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK--HYTLCGTPNYISPEIAT 185
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
DV+S G M G+ P
Sbjct: 186 RSAHGLESDVWSLGCMFYTLLIGRPP 211
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 114/229 (49%), Gaps = 29/229 (12%)
Query: 174 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIK 233
+++ +IG G FG VY+A+L D E+ V + + G+A K + E ++M+ + H N+++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQGKAFK--NRELQIMRKLDHCNIVR 77
Query: 234 V------ISTCSNEEFKALVLEYMP---HGSLEKYMYSSNYILDIFQRLNIMIDVASALE 284
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 285 YLH-FGYSAPIIHCDLKPSNVLLD-DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
Y+H FG I H D+KP N+LLD D V L DF AK L + +++ + + Y
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYR 189
Query: 343 APE--YGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWV 389
APE +G S+ DV+S G +L E G+ IF G+ + V
Sbjct: 190 APELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLV 233
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 109/244 (44%), Gaps = 20/244 (8%)
Query: 148 PSNDANMPSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKV 204
PS +A P+ A R E F + ++G G FG+VYK G+ +++ V +
Sbjct: 33 PSGEA--PNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI 83
Query: 205 FNLQ---CGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMY 261
L+ +A K E +M S+ + ++ +++ C + L+ + MP G L Y+
Sbjct: 84 MELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR 142
Query: 262 SSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAK 321
+ LN + +A + YL ++H DL NVL+ ++DF +AK
Sbjct: 143 EHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK 199
Query: 322 LLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFN 380
LL E++ I +MA E + DV+S+G+ + E T G KP + I
Sbjct: 200 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 259
Query: 381 GEMT 384
E++
Sbjct: 260 SEIS 263
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 135/314 (42%), Gaps = 41/314 (13%)
Query: 148 PSNDANMPSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKV 204
PS +A P+ A R E F + ++G G FG+VYK G+ +++ V +
Sbjct: 3 PSGEA--PNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI 53
Query: 205 FNLQ---CGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMY 261
L+ +A K E +M S+ + ++ +++ C + L+++ MP G L Y+
Sbjct: 54 KELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVR 112
Query: 262 SSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAK 321
+ LN + +A + YL ++H DL NVL+ ++DF +AK
Sbjct: 113 EHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK 169
Query: 322 LLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFN 380
LL E++ I +MA E + DV+S+G+ + E T G KP + I
Sbjct: 170 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 229
Query: 381 GEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRIN 440
E++ S +E L Q I C V+ + ++C + + R
Sbjct: 230 SEIS-----------SILE--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPK 269
Query: 441 AREIVAKLLKI-RD 453
RE++ + K+ RD
Sbjct: 270 FRELIIEFSKMARD 283
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSI 226
A + F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
RH N++++ + L+LEY P G + K + + D + + ++A+AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK-FDEQRTATYITELANALSYC 129
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H S +IH D+KP N+LL ++DF + S +T T+ Y+ PE
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 182
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E GK P
Sbjct: 183 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 131/296 (44%), Gaps = 33/296 (11%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQ---CGRALKGFDVE 219
L + + T+ F + ++G G FG+VYK G+ +++ V + L+ +A K E
Sbjct: 10 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 68
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
+M S+ + ++ +++ C + L+++ MP G L Y+ + LN + +
Sbjct: 69 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI 127
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
A + YL ++H DL NVL+ ++DF +AKLL E++ I
Sbjct: 128 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 184
Query: 340 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTM 398
+MA E + DV+S+G+ + E T G KP + I E++ S +
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 233
Query: 399 EVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKI-RD 453
E L Q I C V+ + ++C + + R RE++ + K+ RD
Sbjct: 234 E--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 280
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 114/229 (49%), Gaps = 29/229 (12%)
Query: 174 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIK 233
+++ +IG G FG VY+A+L D E+ V + + G+A K + E ++M+ + H N+++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQGKAFK--NRELQIMRKLDHCNIVR 77
Query: 234 V------ISTCSNEEFKALVLEYMP---HGSLEKYMYSSNYILDIFQRLNIMIDVASALE 284
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 285 YLH-FGYSAPIIHCDLKPSNVLLD-DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
Y+H FG I H D+KP N+LLD D V L DF AK L + +++ + + Y
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYR 189
Query: 343 APE--YGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWV 389
APE +G S+ DV+S G +L E G+ IF G+ + V
Sbjct: 190 APELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLV 233
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 114/229 (49%), Gaps = 29/229 (12%)
Query: 174 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIK 233
+++ +IG G FG VY+A+L D E+ V + + G+A K + E ++M+ + H N+++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQGKAFK--NRELQIMRKLDHCNIVR 77
Query: 234 V------ISTCSNEEFKALVLEYMP---HGSLEKYMYSSNYILDIFQRLNIMIDVASALE 284
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 285 YLH-FGYSAPIIHCDLKPSNVLLD-DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
Y+H FG I H D+KP N+LLD D V L DF AK L + +++ + + Y
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYR 189
Query: 343 APE--YGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWV 389
APE +G S+ DV+S G +L E G+ IF G+ + V
Sbjct: 190 APELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLV 233
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 131/296 (44%), Gaps = 33/296 (11%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQ---CGRALKGFDVE 219
L + + T+ F + ++G G FG+VYK G+ +++ V + L+ +A K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
+M S+ + ++ +++ C + L+++ MP G L Y+ + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
A + YL ++H DL NVL+ ++DF +AKLL E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 185
Query: 340 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTM 398
+MA E + DV+S+G+ + E T G KP + I E++ S +
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 234
Query: 399 EVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKI-RD 453
E L Q I C V+ + ++C + + R RE++ + K+ RD
Sbjct: 235 E--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 281
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 106/226 (46%), Gaps = 12/226 (5%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQ---CGRALKGFDVE 219
L + + T+ F + ++G G FG+VYK G+ +++ V + L+ +A K E
Sbjct: 10 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 68
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
+M S+ + ++ +++ C + L+++ MP G L Y+ + LN + +
Sbjct: 69 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 127
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
A + YL ++H DL NVL+ ++DF +AKLL E++ I
Sbjct: 128 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 184
Query: 340 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+MA E + DV+S+G+ + E T G KP + I E++
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 230
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 131/296 (44%), Gaps = 33/296 (11%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQ---CGRALKGFDVE 219
L + + T+ F + ++G G FG+VYK G+ +++ V + L+ +A K E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
+M S+ + ++ +++ C + L+++ MP G L Y+ + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
A + YL ++H DL NVL+ ++DF +AKLL E++ I
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 340 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTM 398
+MA E + DV+S+G+ + E T G KP + I E++ S +
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 232
Query: 399 EVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKI-RD 453
E L Q I C V+ + ++C + + R RE++ + K+ RD
Sbjct: 233 E--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSI 226
A + F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
RH N++++ + L+LEY P G++ + + + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H S +IH D+KP N+LL ++DF + S +T+ T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTELCGTLDYLPPEM 177
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E GK P
Sbjct: 178 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 118/275 (42%), Gaps = 40/275 (14%)
Query: 180 LIGRGGFGSVYKARLGDGMEVAVKV----FNLQCGRALKGFDVECEMMKSIRHRNLIKVI 235
++G+G FG K + EV V F+ + R F E ++M+ + H N++K I
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRT---FLKEVKVMRCLEHPNVLKFI 73
Query: 236 STCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPII 295
++ + EY+ G+L + S + QR++ D+AS + YLH S II
Sbjct: 74 GVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNII 130
Query: 296 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL---------ATIG---YMA 343
H DL N L+ +N ++DF +A+L+ E ++L +G +MA
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA 190
Query: 344 PEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGA 403
PE DV+SFGI+L E G+ + D+LP TM+ G
Sbjct: 191 PEMINGRSYDEKVDVFSFGIVLCE-IIGRVNADP-------------DYLP-RTMD-FGL 234
Query: 404 NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQR 438
N+ D + C F + + C PE+R
Sbjct: 235 NVRGFLDRY--CPPNCPPSFFPITVRCCDLDPEKR 267
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 129/295 (43%), Gaps = 38/295 (12%)
Query: 181 IGRGGFGSVY----KARLGDGME--VAVKVFNLQCG-RALKGFDVECEMMKSIRHRNLIK 233
+G+G FG VY K + D E VA+K N R F E +MK ++++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMYS------SNYIL---DIFQRLNIMIDVASALE 284
++ S + +++E M G L+ Y+ S +N +L + + + + ++A +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 285 YLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
YL+ + +H DL N ++ ++ + DF + + + D + L + +M+P
Sbjct: 147 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 203
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN 404
E ++G +T DV+SFG++L E T + + + E L+ V+
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 251
Query: 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRNV 459
LL + D C +F L C +P+ R + EI++ + + + R V
Sbjct: 252 LLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 299
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 106/226 (46%), Gaps = 12/226 (5%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQ---CGRALKGFDVE 219
L + + T+ F + ++G G FG+VYK G+ +++ V + L+ +A K E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
+M S+ + ++ +++ C + L+++ MP G L Y+ + LN + +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
A + YL ++H DL NVL+ ++DF +AKLL E++ I
Sbjct: 130 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 340 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+MA E + DV+S+G+ + E T G KP + I E++
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 12/208 (5%)
Query: 170 RATDGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVF-NLQCGRALKGFDV-ECEMMKSI 226
++ + + L+G G +G V K R D G VA+K F + +K + E +++K +
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKY-MYSSNYILDIFQRLNIMIDVASALEY 285
RH NL+ ++ C ++ LV E++ H L+ ++ + + Q+ I +
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQI-----ING 136
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
+ F +S IIH D+KP N+L+ + V L DF A+ L + +AT Y APE
Sbjct: 137 IGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--VYDDEVATRWYRAPE 194
Query: 346 -YGREGRVSTNGDVYSFGIMLMETFTGK 372
+ + DV++ G ++ E F G+
Sbjct: 195 LLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 12/215 (5%)
Query: 177 ENNLIGRGGFGSV----YKARLGDGMEVAVKVFNLQCGRALKG-FDVECEMMKSIRHRNL 231
E+ +G G FG+V Y+ + + N ALK E +M+ + + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 232 IKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+++I C E + LV+E G L KY+ + ++ D + ++ V+ ++YL
Sbjct: 75 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 129
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREG 350
+ +H DL NVLL A +SDF ++K L E+ QT + + APE
Sbjct: 130 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYY 189
Query: 351 RVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+ S+ DV+SFG+++ E F+ G+KP + E+T
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 224
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 101/202 (50%), Gaps = 17/202 (8%)
Query: 185 GFGSVYKARLGD----GMEVAVKVFNLQCGRALK---GFDVECEMMKSIRHRNLIKVIST 237
G G+ K ++G+ G +VAVK+ N Q R+L E + +K RH ++IK+
Sbjct: 20 GVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV 79
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
S +V+EY+ G L Y+ + ++ R + + SA++Y H ++H
Sbjct: 80 ISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH---RHMVVHR 135
Query: 298 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG- 356
DLKP NVLLD +M A ++DF ++ +++ D + + + Y APE GR+
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLR-DSCGSPNYAAPEV-ISGRLYAGPE 191
Query: 357 -DVYSFGIMLMETFTGKKPTNE 377
D++S G++L G P ++
Sbjct: 192 VDIWSCGVILYALLCGTLPFDD 213
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 122/286 (42%), Gaps = 39/286 (13%)
Query: 181 IGRGGFGSVYKARLGDGME------VAVKVFNLQCG-RALKGFDVECEMMKSIRHRNLIK 233
+G+G FG VY+ D ++ VAVK N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILD---------IFQRLNIMIDVASALE 284
++ S + +V+E M HG L+ Y+ S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 285 YLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
YL+ + +H DL N ++ + + DF + + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN 404
E ++G +T+ D++SFG++L E + + + + E LK V+
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 249
Query: 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLK 450
L Q D C V +L C +P+ R EIV LLK
Sbjct: 250 YLDQPD-------NCPERVTDLMRMCWQFNPKMRPTFLEIV-NLLK 287
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 15/201 (7%)
Query: 175 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFD-------VECEMMKSIR 227
+ + + +G G F +VYKAR + ++ V + ++ G + D E ++++ +
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQI-VAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 228 HRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLH 287
H N+I ++ ++ +LV ++M LE + ++ +L M+ LEYLH
Sbjct: 71 HPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH 129
Query: 288 FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYG 347
+ I+H DLKP+N+LLD+N V L+DF +AK +++ + T Y APE
Sbjct: 130 QHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY--XHQVVTRWYRAPELL 184
Query: 348 REGRVSTNG-DVYSFGIMLME 367
R+ G D+++ G +L E
Sbjct: 185 FGARMYGVGVDMWAVGCILAE 205
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 12/215 (5%)
Query: 177 ENNLIGRGGFGSV----YKARLGDGMEVAVKVFNLQCGRALKG-FDVECEMMKSIRHRNL 231
E+ +G G FG+V Y+ + + N ALK E +M+ + + +
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 232 IKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+++I C E + LV+E G L KY+ + ++ D + ++ V+ ++YL
Sbjct: 89 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 143
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREG 350
+ +H DL NVLL A +SDF ++K L E+ QT + + APE
Sbjct: 144 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 203
Query: 351 RVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+ S+ DV+SFG+++ E F+ G+KP + E+T
Sbjct: 204 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 238
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 12/215 (5%)
Query: 177 ENNLIGRGGFGSV----YKARLGDGMEVAVKVFNLQCGRALKG-FDVECEMMKSIRHRNL 231
E+ +G G FG+V Y+ + + N ALK E +M+ + + +
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 432
Query: 232 IKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+++I C E + LV+E G L KY+ + ++ D + ++ V+ ++YL
Sbjct: 433 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 487
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREG 350
+ +H DL NVLL A +SDF ++K L E+ QT + + APE
Sbjct: 488 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 547
Query: 351 RVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+ S+ DV+SFG+++ E F+ G+KP + E+T
Sbjct: 548 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 582
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 12/215 (5%)
Query: 177 ENNLIGRGGFGSV----YKARLGDGMEVAVKVFNLQCGRALKG-FDVECEMMKSIRHRNL 231
E+ +G G FG+V Y+ + + N ALK E +M+ + + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 232 IKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+++I C E + LV+E G L KY+ + ++ D + ++ V+ ++YL
Sbjct: 75 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 129
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREG 350
+ +H DL NVLL A +SDF ++K L E+ QT + + APE
Sbjct: 130 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 189
Query: 351 RVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+ S+ DV+SFG+++ E F+ G+KP + E+T
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 224
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 12/215 (5%)
Query: 177 ENNLIGRGGFGSV----YKARLGDGMEVAVKVFNLQCGRALKG-FDVECEMMKSIRHRNL 231
E+ +G G FG+V Y+ + + N ALK E +M+ + + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 232 IKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+++I C E + LV+E G L KY+ + ++ D + ++ V+ ++YL
Sbjct: 91 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 145
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREG 350
+ +H DL NVLL A +SDF ++K L E+ QT + + APE
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 351 RVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+ S+ DV+SFG+++ E F+ G+KP + E+T
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 240
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 12/215 (5%)
Query: 177 ENNLIGRGGFGSV----YKARLGDGMEVAVKVFNLQCGRALKG-FDVECEMMKSIRHRNL 231
E+ +G G FG+V Y+ + + N ALK E +M+ + + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 232 IKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+++I C E + LV+E G L KY+ + ++ D + ++ V+ ++YL
Sbjct: 91 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 145
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREG 350
+ +H DL NVLL A +SDF ++K L E+ QT + + APE
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 351 RVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+ S+ DV+SFG+++ E F+ G+KP + E+T
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 240
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 12/215 (5%)
Query: 177 ENNLIGRGGFGSV----YKARLGDGMEVAVKVFNLQCGRALKG-FDVECEMMKSIRHRNL 231
E+ +G G FG+V Y+ + + N ALK E +M+ + + +
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 232 IKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+++I C E + LV+E G L KY+ + ++ D + ++ V+ ++YL
Sbjct: 81 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 135
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREG 350
+ +H DL NVLL A +SDF ++K L E+ QT + + APE
Sbjct: 136 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 195
Query: 351 RVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+ S+ DV+SFG+++ E F+ G+KP + E+T
Sbjct: 196 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 230
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 12/215 (5%)
Query: 177 ENNLIGRGGFGSV----YKARLGDGMEVAVKVFNLQCGRALKG-FDVECEMMKSIRHRNL 231
E+ +G G FG+V Y+ + + N ALK E +M+ + + +
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 232 IKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+++I C E + LV+E G L KY+ + ++ D + ++ V+ ++YL
Sbjct: 69 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 123
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREG 350
+ +H DL NVLL A +SDF ++K L E+ QT + + APE
Sbjct: 124 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 183
Query: 351 RVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+ S+ DV+SFG+++ E F+ G+KP + E+T
Sbjct: 184 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 218
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 16/218 (7%)
Query: 164 SHLELCR--ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFD 217
SH+ R A + F +G+G FG+VY AR + A+KV F Q +A
Sbjct: 2 SHMSKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 218 VECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMI 277
E E+ +RH N++++ + L+LEY P G++ + + + D + +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYIT 120
Query: 278 DVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA 337
++A+AL Y H S +IH D+KP N+LL ++DF + S +T
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCG 173
Query: 338 TIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 374
T+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 174 TLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 12/215 (5%)
Query: 177 ENNLIGRGGFGSV----YKARLGDGMEVAVKVFNLQCGRALKG-FDVECEMMKSIRHRNL 231
E+ +G G FG+V Y+ + + N ALK E +M+ + + +
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 433
Query: 232 IKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+++I C E + LV+E G L KY+ + ++ D + ++ V+ ++YL
Sbjct: 434 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 488
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREG 350
+ +H DL NVLL A +SDF ++K L E+ QT + + APE
Sbjct: 489 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 548
Query: 351 RVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+ S+ DV+SFG+++ E F+ G+KP + E+T
Sbjct: 549 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 583
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 175 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKV 234
F++ IG+G FG V+K +V A+K D+E + + I V
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVV----------AIKIIDLEEAEDEIEDIQQEITV 74
Query: 235 ISTCSNEEFKA------------LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASA 282
+S C + +++EY+ GS + + + D FQ ++ ++
Sbjct: 75 LSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPF--DEFQIATMLKEILKG 132
Query: 283 LEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
L+YLH S IH D+K +NVLL + L+DF +A LT D + + + T +M
Sbjct: 133 LDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNTFVGTPFWM 187
Query: 343 APEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEI 378
APE ++ + D++S GI +E G+ P +++
Sbjct: 188 APEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDM 223
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 12/215 (5%)
Query: 177 ENNLIGRGGFGSV----YKARLGDGMEVAVKVFNLQCGRALKG-FDVECEMMKSIRHRNL 231
E+ +G G FG+V Y+ + + N ALK E +M+ + + +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 232 IKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+++I C E + LV+E G L KY+ + ++ D + ++ V+ ++YL
Sbjct: 71 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 125
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREG 350
+ +H DL NVLL A +SDF ++K L E+ QT + + APE
Sbjct: 126 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 185
Query: 351 RVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+ S+ DV+SFG+++ E F+ G+KP + E+T
Sbjct: 186 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 220
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
IG+G G+VY A + G EVA++ NLQ + E +M+ ++ N++ + +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
+ +V+EY+ GSL + + +D Q + + ALE+LH S +IH ++
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRNI 143
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVY 359
K N+LL + L+DF +T E ++ + T +MAPE D++
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIW 201
Query: 360 SFGIMLMETFTGKKP 374
S GIM +E G+ P
Sbjct: 202 SLGIMAIEMIEGEPP 216
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 181 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVIST 237
IG+G F V AR + G EVAVK+ + +L+ E +MK + H N++K+
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
E+ LV+EY G + Y+ + ++ + R + SA++Y H + I+H
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 130
Query: 298 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-TNG 356
DLK N+LLD +M ++DF + T ++ T + Y APE + +
Sbjct: 131 DLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEV 187
Query: 357 DVYSFGIMLMETFTGKKPTNEIFNGE 382
DV+S G++L +G P F+G+
Sbjct: 188 DVWSLGVILYTLVSGSLP----FDGQ 209
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 122/286 (42%), Gaps = 39/286 (13%)
Query: 181 IGRGGFGSVYKARLGDGME------VAVKVFNLQCG-RALKGFDVECEMMKSIRHRNLIK 233
+G+G FG VY+ D ++ VAVK N R F E +MK ++++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILD---------IFQRLNIMIDVASALE 284
++ S + +V+E M HG L+ Y+ S + + + + + ++A +
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 285 YLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
YL+ + +H DL N ++ + + DF + + + D + L + +MAP
Sbjct: 144 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN 404
E ++G +T+ D++SFG++L E + + + + E LK V+
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 248
Query: 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLK 450
L Q D C V +L C +P+ R EIV LLK
Sbjct: 249 YLDQPD-------NCPERVTDLMRMCWQFNPKMRPTFLEIV-NLLK 286
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSI 226
A + F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
RH N++++ + L+LEY P G++ + + + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H S +IH D+KP N+LL ++DF + S +T T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEM 177
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E GK P
Sbjct: 178 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 130/296 (43%), Gaps = 33/296 (11%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQ---CGRALKGFDVE 219
L + + T+ F + ++G G FG+VYK G+ +++ V + L+ +A K E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
+M S+ + ++ +++ C + L+ + MP G L Y+ + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
A + YL ++H DL NVL+ ++DF +AKLL E++ I
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 340 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTM 398
+MA E + DV+S+G+ + E T G KP + I E++ S +
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 232
Query: 399 EVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKI-RD 453
E L Q I C V+ + ++C + + R RE++ + K+ RD
Sbjct: 233 E--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 23/219 (10%)
Query: 175 FSENNL-----IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIR- 227
F NNL +G G FG V +A G G E AV ++ ++ D + +M ++
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 228 ------HRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVAS 281
H N++ ++ C++ ++ EY +G L ++ + +L+ I S
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLS 162
Query: 282 ALEYLHFG----------YSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 331
+ LHF S IH D+ NVLL + VA + DF +A+ + + +
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 332 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 370
+ + +MAPE + + DV+S+GI+L E F+
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 12/226 (5%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQ---CGRALKGFDVE 219
L + + T+ F + ++G G FG+VYK G+ +++ V + L+ +A K E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
+M S+ + ++ +++ C + L+ + MP G L Y+ + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
A + YL ++H DL NVL+ ++DF +AKLL E++ I
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 340 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+MA E + DV+S+G+ + E T G KP + I E++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSI 226
A + F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
RH N++++ + L+LEY P G++ + + + D + + ++A+AL Y
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 123
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H S +IH D+KP N+LL ++DF + S +T T+ Y+ PE
Sbjct: 124 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 176
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E GK P
Sbjct: 177 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSI 226
A + F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
RH N++++ + L+LEY P G++ + + + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H S +IH D+KP N+LL ++DF + S +T T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTXLCGTLDYLPPEM 177
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E GK P
Sbjct: 178 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSI 226
A + F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
RH N++++ + L+LEY P G++ + + + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H S +IH D+KP N+LL ++DF + S +T T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEM 177
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E GK P
Sbjct: 178 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 17/199 (8%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQC------GRALKGFDVECEMMKSIRHRNLIKV 234
+G G +G VYKA+ G VA+K L A++ E ++K + H N++ +
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR----EISLLKELHHPNIVSL 84
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPI 294
I +E LV E+M L+K + + L Q I I + L + + I
Sbjct: 85 IDVIHSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYLYQLLRGVAHCHQHRI 140
Query: 295 IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY-GREGRVS 353
+H DLKP N+L++ + L+DF +A+ +S T + T+ Y AP+ + S
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGSKKYS 198
Query: 354 TNGDVYSFGIMLMETFTGK 372
T+ D++S G + E TGK
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSI 226
A + F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
RH N++++ + L+LEY P G++ + + + D + + ++A+AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 125
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H S +IH D+KP N+LL ++DF + S +T T+ Y+ PE
Sbjct: 126 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEM 178
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E GK P
Sbjct: 179 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 130/296 (43%), Gaps = 33/296 (11%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQ---CGRALKGFDVE 219
L + + T+ F + ++G G FG+VYK G+ +++ V + L+ +A K E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
+M S+ + ++ +++ C + L+ + MP G L Y+ + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
A + YL ++H DL NVL+ ++DF +AKLL E++ I
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 340 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTM 398
+MA E + DV+S+G+ + E T G KP + I E++ S +
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 232
Query: 399 EVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKI-RD 453
E L Q I C V+ + ++C + + R RE++ + K+ RD
Sbjct: 233 E--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSI 226
A + F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
RH N++++ + L+LEY P G++ + + + D + + ++A+AL Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 150
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H S +IH D+KP N+LL ++DF + S +T T+ Y+ PE
Sbjct: 151 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 203
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E GK P
Sbjct: 204 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSI 226
A + F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
RH N++++ + L+LEY P G++ + + + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H S +IH D+KP N+LL ++DF + S +T T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 177
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E GK P
Sbjct: 178 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 130/296 (43%), Gaps = 33/296 (11%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQ---CGRALKGFDVE 219
L + + T+ F + ++G G FG+VYK G+ +++ V + L+ +A K E
Sbjct: 16 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
+M S+ + ++ +++ C + L+ + MP G L Y+ + LN + +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
A + YL ++H DL NVL+ ++DF +AKLL E++ I
Sbjct: 134 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 340 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTM 398
+MA E + DV+S+G+ + E T G KP + I E++ S +
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 239
Query: 399 EVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKI-RD 453
E L Q I C V+ + ++C + + R RE++ + K+ RD
Sbjct: 240 E--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 286
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSI 226
A + F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
RH N++++ + L+LEY P G++ + + + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H S +IH D+KP N+LL ++DF + S +T T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 180
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E GK P
Sbjct: 181 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 129/295 (43%), Gaps = 38/295 (12%)
Query: 181 IGRGGFGSVY----KARLGDGME--VAVKVFNLQCG-RALKGFDVECEMMKSIRHRNLIK 233
+G+G FG VY K + D E VA+K N R F E +MK ++++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMYS------SNYIL---DIFQRLNIMIDVASALE 284
++ S + +++E M G L+ Y+ S +N +L + + + + ++A +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 285 YLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
YL+ + +H DL N ++ ++ + DF + + + D + L + +M+P
Sbjct: 147 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 203
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN 404
E ++G +T DV+SFG++L E T + + + E L+ V+
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 251
Query: 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRNV 459
LL + D C +F L C +P+ R + EI++ + + + R V
Sbjct: 252 LLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 299
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 12/226 (5%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQ---CGRALKGFDVE 219
L + + T+ F + ++G G FG+VYK G+ +++ V + L+ +A K E
Sbjct: 19 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 77
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
+M S+ + ++ +++ C + L+ + MP G L Y+ + LN + +
Sbjct: 78 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 136
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
A + YL ++H DL NVL+ ++DF +AKLL E++ I
Sbjct: 137 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 193
Query: 340 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+MA E + DV+S+G+ + E T G KP + I E++
Sbjct: 194 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 239
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 133/305 (43%), Gaps = 38/305 (12%)
Query: 171 ATDGFSENNLIGRGGFGSVY----KARLGDGME--VAVKVFNLQCG-RALKGFDVECEMM 223
A + + + +G+G FG VY K + D E VA+K N R F E +M
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYS------SNYIL---DIFQRLN 274
K ++++++ S + +++E M G L+ Y+ S +N +L + + +
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 129
Query: 275 IMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 334
+ ++A + YL+ + +H DL N ++ ++ + DF + + + D +
Sbjct: 130 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 186
Query: 335 TLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLP 394
L + +M+PE ++G +T DV+SFG++L E T + + + E L+
Sbjct: 187 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------- 239
Query: 395 ISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454
V+ LL + D C +F L C +P+ R + EI++ + + +
Sbjct: 240 -----VMEGGLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 287
Query: 455 LLRNV 459
R V
Sbjct: 288 GFREV 292
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 17/199 (8%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQC------GRALKGFDVECEMMKSIRHRNLIKV 234
+G G +G VYKA+ G VA+K L A++ E ++K + H N++ +
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR----EISLLKELHHPNIVSL 84
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPI 294
I +E LV E+M L+K + + L Q I I + L + + I
Sbjct: 85 IDVIHSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYLYQLLRGVAHCHQHRI 140
Query: 295 IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY-GREGRVS 353
+H DLKP N+L++ + L+DF +A+ +S T + T+ Y AP+ + S
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGSKKYS 198
Query: 354 TNGDVYSFGIMLMETFTGK 372
T+ D++S G + E TGK
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 12/226 (5%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQ---CGRALKGFDVE 219
L + + T+ F + ++G G FG+VYK G+ +++ V + L+ +A K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
+M S+ + ++ +++ C + L+ + MP G L Y+ + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
A + YL ++H DL NVL+ ++DF +AKLL E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 185
Query: 340 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+MA E + DV+S+G+ + E T G KP + I E++
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 12/226 (5%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQ---CGRALKGFDVE 219
L + + T+ F + ++G G FG+VYK G+ +++ V + L+ +A K E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
+M S+ + ++ +++ C + L+ + MP G L Y+ + LN + +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
A + YL ++H DL NVL+ ++DF +AKLL E++ I
Sbjct: 130 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 340 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+MA E + DV+S+G+ + E T G KP + I E++
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 129/295 (43%), Gaps = 38/295 (12%)
Query: 181 IGRGGFGSVY----KARLGDGME--VAVKVFNLQCG-RALKGFDVECEMMKSIRHRNLIK 233
+G+G FG VY K + D E VA+K N R F E +MK ++++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMYS------SNYIL---DIFQRLNIMIDVASALE 284
++ S + +++E M G L+ Y+ S +N +L + + + + ++A +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 285 YLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
YL+ + +H DL N ++ ++ + DF + + + D + L + +M+P
Sbjct: 153 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN 404
E ++G +T DV+SFG++L E T + + + E L+ V+
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 257
Query: 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRNV 459
LL + D C +F L C +P+ R + EI++ + + + R V
Sbjct: 258 LLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 305
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSI 226
A + F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
RH N++++ + L+LEY P G++ + + + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H S +IH D+KP N+LL ++DF + S +T T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 180
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E GK P
Sbjct: 181 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 129/295 (43%), Gaps = 38/295 (12%)
Query: 181 IGRGGFGSVY----KARLGDGME--VAVKVFNLQCG-RALKGFDVECEMMKSIRHRNLIK 233
+G+G FG VY K + D E VA+K N R F E +MK ++++
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMYS------SNYIL---DIFQRLNIMIDVASALE 284
++ S + +++E M G L+ Y+ S +N +L + + + + ++A +
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 285 YLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
YL+ + +H DL N ++ ++ + DF + + + D + L + +M+P
Sbjct: 175 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 231
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN 404
E ++G +T DV+SFG++L E T + + + E L+ V+
Sbjct: 232 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 279
Query: 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRNV 459
LL + D C +F L C +P+ R + EI++ + + + R V
Sbjct: 280 LLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 327
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 129/295 (43%), Gaps = 38/295 (12%)
Query: 181 IGRGGFGSVY----KARLGDGME--VAVKVFNLQCG-RALKGFDVECEMMKSIRHRNLIK 233
+G+G FG VY K + D E VA+K N R F E +MK ++++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMYS------SNYIL---DIFQRLNIMIDVASALE 284
++ S + +++E M G L+ Y+ S +N +L + + + + ++A +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 285 YLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
YL+ + +H DL N ++ ++ + DF + + + D + L + +M+P
Sbjct: 153 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN 404
E ++G +T DV+SFG++L E T + + + E L+ V+
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 257
Query: 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRNV 459
LL + D C +F L C +P+ R + EI++ + + + R V
Sbjct: 258 LLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 305
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 12/226 (5%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQ---CGRALKGFDVE 219
L + + T+ F + ++G G FG+VYK G+ +++ V + L+ +A K E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
+M S+ + ++ +++ C + L+ + MP G L Y+ + LN + +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
A + YL ++H DL NVL+ ++DF +AKLL E++ I
Sbjct: 130 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 340 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+MA E + DV+S+G+ + E T G KP + I E++
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 12/226 (5%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQ---CGRALKGFDVE 219
L + + T+ F + ++G G FG+VYK G+ +++ V + L+ +A K E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
+M S+ + ++ +++ C + L+ + MP G L Y+ + LN + +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
A + YL ++H DL NVL+ ++DF +AKLL E++ I
Sbjct: 130 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 340 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+MA E + DV+S+G+ + E T G KP + I E++
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSI 226
A + F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
RH N++++ + L+LEY P G++ + + + D + + ++A+AL Y
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 128
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H S +IH D+KP N+LL ++DF + S +T T+ Y+ PE
Sbjct: 129 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 181
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E GK P
Sbjct: 182 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSI 226
A + F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
RH N++++ + L+LEY P G++ + + + D + + ++A+AL Y
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 141
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H S +IH D+KP N+LL ++DF + S +T T+ Y+ PE
Sbjct: 142 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 194
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E GK P
Sbjct: 195 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSI 226
A + F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
RH N++++ + L+LEY P G++ + + + D + + ++A+AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 129
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H S +IH D+KP N+LL ++DF + S +T T+ Y+ PE
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 182
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E GK P
Sbjct: 183 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 133/305 (43%), Gaps = 38/305 (12%)
Query: 171 ATDGFSENNLIGRGGFGSVY----KARLGDGME--VAVKVFNLQCG-RALKGFDVECEMM 223
A + + + +G+G FG VY K + D E VA+K N R F E +M
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 72
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYS------SNYIL---DIFQRLN 274
K ++++++ S + +++E M G L+ Y+ S +N +L + + +
Sbjct: 73 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 132
Query: 275 IMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 334
+ ++A + YL+ + +H DL N ++ ++ + DF + + + D +
Sbjct: 133 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 189
Query: 335 TLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLP 394
L + +M+PE ++G +T DV+SFG++L E T + + + E L+
Sbjct: 190 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------- 242
Query: 395 ISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454
V+ LL + D C +F L C +P+ R + EI++ + + +
Sbjct: 243 -----VMEGGLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 290
Query: 455 LLRNV 459
R V
Sbjct: 291 GFREV 295
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 12/226 (5%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQ---CGRALKGFDVE 219
L + + T+ F + ++G G FG+VYK G+ +++ V + L+ +A K E
Sbjct: 15 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 73
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
+M S+ + ++ +++ C + L+ + MP G L Y+ + LN + +
Sbjct: 74 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 132
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
A + YL ++H DL NVL+ ++DF +AKLL E++ I
Sbjct: 133 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 189
Query: 340 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+MA E + DV+S+G+ + E T G KP + I E++
Sbjct: 190 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 235
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 133/305 (43%), Gaps = 38/305 (12%)
Query: 171 ATDGFSENNLIGRGGFGSVY----KARLGDGME--VAVKVFNLQCG-RALKGFDVECEMM 223
A + + + +G+G FG VY K + D E VA+K N R F E +M
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYS------SNYIL---DIFQRLN 274
K ++++++ S + +++E M G L+ Y+ S +N +L + + +
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 135
Query: 275 IMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 334
+ ++A + YL+ + +H DL N ++ ++ + DF + + + D +
Sbjct: 136 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 192
Query: 335 TLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLP 394
L + +M+PE ++G +T DV+SFG++L E T + + + E L+
Sbjct: 193 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------- 245
Query: 395 ISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454
V+ LL + D C +F L C +P+ R + EI++ + + +
Sbjct: 246 -----VMEGGLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 293
Query: 455 LLRNV 459
R V
Sbjct: 294 GFREV 298
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 12/226 (5%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQ---CGRALKGFDVE 219
L + + T+ F + ++G G FG+VYK G+ +++ V + L+ +A K E
Sbjct: 6 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 64
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
+M S+ + ++ +++ C + L+ + MP G L Y+ + LN + +
Sbjct: 65 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 123
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
A + YL ++H DL NVL+ ++DF +AKLL E++ I
Sbjct: 124 AEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 180
Query: 340 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+MA E + DV+S+G+ + E T G KP + I E++
Sbjct: 181 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 226
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 133/305 (43%), Gaps = 38/305 (12%)
Query: 171 ATDGFSENNLIGRGGFGSVY----KARLGDGME--VAVKVFNLQCG-RALKGFDVECEMM 223
A + + + +G+G FG VY K + D E VA+K N R F E +M
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYS------SNYIL---DIFQRLN 274
K ++++++ S + +++E M G L+ Y+ S +N +L + + +
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 135
Query: 275 IMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 334
+ ++A + YL+ + +H DL N ++ ++ + DF + + + D +
Sbjct: 136 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 192
Query: 335 TLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLP 394
L + +M+PE ++G +T DV+SFG++L E T + + + E L+
Sbjct: 193 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------- 245
Query: 395 ISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454
V+ LL + D C +F L C +P+ R + EI++ + + +
Sbjct: 246 -----VMEGGLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 293
Query: 455 LLRNV 459
R V
Sbjct: 294 GFREV 298
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 129/295 (43%), Gaps = 38/295 (12%)
Query: 181 IGRGGFGSVY----KARLGDGME--VAVKVFNLQCG-RALKGFDVECEMMKSIRHRNLIK 233
+G+G FG VY K + D E VA+K N R F E +MK ++++
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMYS------SNYIL---DIFQRLNIMIDVASALE 284
++ S + +++E M G L+ Y+ S +N +L + + + + ++A +
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 285 YLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
YL+ + +H DL N ++ ++ + DF + + + D + L + +M+P
Sbjct: 144 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 200
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN 404
E ++G +T DV+SFG++L E T + + + E L+ V+
Sbjct: 201 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 248
Query: 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRNV 459
LL + D C +F L C +P+ R + EI++ + + + R V
Sbjct: 249 LLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 296
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 12/226 (5%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQ---CGRALKGFDVE 219
L + + T+ F + ++G G FG+VYK G+ +++ V + L+ +A K E
Sbjct: 3 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 61
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
+M S+ + ++ +++ C + L+ + MP G L Y+ + LN + +
Sbjct: 62 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 120
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
A + YL ++H DL NVL+ ++DF +AKLL E++ I
Sbjct: 121 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 177
Query: 340 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+MA E + DV+S+G+ + E T G KP + I E++
Sbjct: 178 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 223
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 14/209 (6%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSI 226
A + F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
RH N++++ + L+LEY P G + K + + D + + ++A+AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK-FDEQRTATYITELANALSYC 129
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H S +IH D+KP N+LL ++DF + S + T+ Y+ PE
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLXGTLDYLPPEM 182
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E GK P
Sbjct: 183 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 12/226 (5%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQ---CGRALKGFDVE 219
L + + T+ F + ++G G FG+VYK G+ +++ V + L+ +A K E
Sbjct: 13 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 71
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
+M S+ + ++ +++ C + L+++ MP G L Y+ + LN + +
Sbjct: 72 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 130
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
A + YL ++H DL NVL+ ++DF AKLL E++ I
Sbjct: 131 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 187
Query: 340 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+MA E + DV+S+G+ + E T G KP + I E++
Sbjct: 188 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 233
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 12/226 (5%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQ---CGRALKGFDVE 219
L + + T+ F + ++G G FG+VYK G+ +++ V + L+ +A K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
+M S+ + ++ +++ C + L+++ MP G L Y+ + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
A + YL ++H DL NVL+ ++DF AKLL E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 340 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+MA E + DV+S+G+ + E T G KP + I E++
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSI 226
A + F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
RH N++++ + L+LEY P G++ + + + D + + ++A+AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 125
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H S +IH D+KP N+LL ++DF + S +T T+ Y+ PE
Sbjct: 126 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSCHAPSSRRTTLSGTLDYLPPEM 178
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E GK P
Sbjct: 179 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSI 226
A + F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
RH N++++ + L+LEY P G++ + + + D + + ++A+AL Y
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 121
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H S +IH D+KP N+LL ++DF + S +T T+ Y+ PE
Sbjct: 122 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 174
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E GK P
Sbjct: 175 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 130/296 (43%), Gaps = 33/296 (11%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQ---CGRALKGFDVE 219
L + + T+ F + ++G G FG+VYK G+ +++ V + L+ +A K E
Sbjct: 34 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 92
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
+M S+ + ++ +++ C + L+ + MP G L Y+ + LN + +
Sbjct: 93 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 151
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
A + YL ++H DL NVL+ ++DF +AKLL E++ I
Sbjct: 152 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 208
Query: 340 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTM 398
+MA E + DV+S+G+ + E T G KP + I E++ S +
Sbjct: 209 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 257
Query: 399 EVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKI-RD 453
E L Q I C V+ + ++C + + R RE++ + K+ RD
Sbjct: 258 E--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 304
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 19/208 (9%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G FG VYKA+ + G A KV + L+ + VE E++ + H ++K++
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
++ +++E+ P G+++ M + L Q I + LE L+F +S IIH DL
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ---IQVVCRQMLEALNFLHSKRIIHRDL 135
Query: 300 KPSNVLLDDNMVAHLSDFSIA----KLLTGEDQSMTQTQTLATIGYMAPEY-----GREG 350
K NVL+ L+DF ++ K L D + T +MAPE ++
Sbjct: 136 KAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD------SFIGTPYWMAPEVVMCETMKDT 189
Query: 351 RVSTNGDVYSFGIMLMETFTGKKPTNEI 378
D++S GI L+E + P +E+
Sbjct: 190 PYDYKADIWSLGITLIEMAQIEPPHHEL 217
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 12/226 (5%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQ---CGRALKGFDVE 219
L + + T+ F + ++G G FG+VYK G+ +++ V + L+ +A K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
+M S+ + ++ +++ C + L+++ MP G L Y+ + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
A + YL ++H DL NVL+ ++DF AKLL E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 340 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+MA E + DV+S+G+ + E T G KP + I E++
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSI 226
A + F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
RH N++++ + L+LEY P G++ + + + D + + ++A+AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 129
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H S +IH D+KP N+LL ++DF + S +T T+ Y+ PE
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEX 182
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR D++S G++ E GK P
Sbjct: 183 I-EGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 33/222 (14%)
Query: 179 NLIGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRALK-GFDVECEMMKSI-RHRN 230
++G G FG V A + G ++VAVK+ + + + E +MM + H N
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYM-------------YSSNYILDIFQRLNIMI 277
++ ++ C+ L+ EY +G L Y+ Y + L+ + LN++
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 278 ---------DVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 328
VA +E+L F +H DL NVL+ V + DF +A+ + +
Sbjct: 171 FEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN 227
Query: 329 SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 370
+ + + +MAPE EG + DV+S+GI+L E F+
Sbjct: 228 YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSI 226
A + F +G+G FG+VY AR + + A+KV F Q +A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
RH N++++ + L+LEY P G++ + + + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H S +IH D+KP N+LL ++DF + S + T+ Y+ PE
Sbjct: 125 H---SKKVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEM 177
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E GK P
Sbjct: 178 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 19/208 (9%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G FG VYKA+ + G A KV + L+ + VE E++ + H ++K++
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
++ +++E+ P G+++ M + L Q I + LE L+F +S IIH DL
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ---IQVVCRQMLEALNFLHSKRIIHRDL 143
Query: 300 KPSNVLLDDNMVAHLSDFSIA----KLLTGEDQSMTQTQTLATIGYMAPEY-----GREG 350
K NVL+ L+DF ++ K L D + T +MAPE ++
Sbjct: 144 KAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD------SFIGTPYWMAPEVVMCETMKDT 197
Query: 351 RVSTNGDVYSFGIMLMETFTGKKPTNEI 378
D++S GI L+E + P +E+
Sbjct: 198 PYDYKADIWSLGITLIEMAQIEPPHHEL 225
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 36/233 (15%)
Query: 168 LCRATDGFSENNLIGRGGFGSVYKAR--LGDGMEVAVKVFNLQCGRALKGFDVECEM--- 222
LCRA + IG G +G V+KAR G VA+K +Q G E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 223 --MKSIRHRNLIKVISTCS----NEEFK-ALVLEYMPHGSLEKYM-------YSSNYILD 268
+++ H N++++ C+ + E K LV E++ L Y+ + I D
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKD 124
Query: 269 IFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 328
+ M + L++LH S ++H DLKP N+L+ + L+DF +A++ + +
Sbjct: 125 M------MFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-- 173
Query: 329 SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNG 381
M T + T+ Y APE + +T D++S G + E F +KP +F G
Sbjct: 174 -MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKP---LFRG 221
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 14/205 (6%)
Query: 179 NLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALK---GFDVECEMMKSIRHRNLIKV 234
+ +G G FG V + G +VAVK+ N Q R+L E + +K RH ++IK+
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPI 294
S +V+EY+ G L Y+ N LD + + + S ++Y H +
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYI-CKNGRLDEKESRRLFQQILSGVDYCH---RHMV 137
Query: 295 IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVST 354
+H DLKP NVLLD +M A ++DF ++ +++ D + + + Y APE GR+
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRX-SCGSPNYAAPEVI-SGRLYA 193
Query: 355 NG--DVYSFGIMLMETFTGKKPTNE 377
D++S G++L G P ++
Sbjct: 194 GPEVDIWSSGVILYALLCGTLPFDD 218
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 36/233 (15%)
Query: 168 LCRATDGFSENNLIGRGGFGSVYKAR--LGDGMEVAVKVFNLQCGRALKGFDVECEM--- 222
LCRA + IG G +G V+KAR G VA+K +Q G E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 223 --MKSIRHRNLIKVISTCS----NEEFK-ALVLEYMPHGSLEKYM-------YSSNYILD 268
+++ H N++++ C+ + E K LV E++ L Y+ + I D
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKD 124
Query: 269 IFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 328
+ M + L++LH S ++H DLKP N+L+ + L+DF +A++ + +
Sbjct: 125 M------MFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-- 173
Query: 329 SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNG 381
M T + T+ Y APE + +T D++S G + E F +KP +F G
Sbjct: 174 -MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKP---LFRG 221
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 175 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKV 234
F++ IG+G FG V+K +V A+K D+E + + I V
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVV----------AIKIIDLEEAEDEIEDIQQEITV 58
Query: 235 ISTCSNEEFKA------------LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASA 282
+S C + +++EY+ GS + LD Q I+ ++
Sbjct: 59 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKG 116
Query: 283 LEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
L+YLH S IH D+K +NVLL ++ L+DF +A LT D + + + T +M
Sbjct: 117 LDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWM 171
Query: 343 APEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEI 378
APE ++ + D++S GI +E G+ P +E+
Sbjct: 172 APEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 36/233 (15%)
Query: 168 LCRATDGFSENNLIGRGGFGSVYKAR--LGDGMEVAVKVFNLQCGRALKGFDVECEM--- 222
LCRA + IG G +G V+KAR G VA+K +Q G E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 223 --MKSIRHRNLIKVISTCS----NEEFK-ALVLEYMPHGSLEKYM-------YSSNYILD 268
+++ H N++++ C+ + E K LV E++ L Y+ + I D
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKD 124
Query: 269 IFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 328
+ M + L++LH S ++H DLKP N+L+ + L+DF +A++ + +
Sbjct: 125 M------MFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-- 173
Query: 329 SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNG 381
M T + T+ Y APE + +T D++S G + E F +KP +F G
Sbjct: 174 -MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKP---LFRG 221
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 181 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVIST 237
IG+G F V AR + G EVAVK+ + +L+ E +MK + H N++K+
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
E+ LV+EY G + Y+ + + + R + SA++Y H Y I+H
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKY---IVHR 138
Query: 298 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-TNG 356
DLK N+LLD +M ++DF + T ++ T + Y APE + +
Sbjct: 139 DLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT---FCGSPPYAAPELFQGKKYDGPEV 195
Query: 357 DVYSFGIMLMETFTGKKPTNEIFNGE 382
DV+S G++L +G P F+G+
Sbjct: 196 DVWSLGVILYTLVSGSLP----FDGQ 217
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 114/231 (49%), Gaps = 34/231 (14%)
Query: 174 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIK 233
++ +IG G FG V++A+L + EVA+K LQ R + E ++M+ ++H N++
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKV-LQDKRFK---NRELQIMRIVKHPNVVD 96
Query: 234 VIS------TCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNI------MIDVAS 281
+ + +E F LVLEY+P E +S + + Q + + M +
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVP----ETVYRASRHYAKLKQTMPMLLIKLYMYQLLR 152
Query: 282 ALEYLHFGYSAPIIHCDLKPSNVLLD-DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIG 340
+L Y+H S I H D+KP N+LLD + V L DF AK+L + +++ + +
Sbjct: 153 SLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVS---XICSRY 206
Query: 341 YMAPE--YGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWV 389
Y APE +G +TN D++S G ++ E G+ +F GE + V
Sbjct: 207 YRAPELIFGATN-YTTNIDIWSTGCVMAELMQGQP----LFPGESGIDQLV 252
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 132/305 (43%), Gaps = 38/305 (12%)
Query: 171 ATDGFSENNLIGRGGFGSVY----KARLGDGME--VAVKVFNLQCG-RALKGFDVECEMM 223
A + + + +G+G FG VY K + D E VA+K N R F E +M
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 67
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYS------SNYIL---DIFQRLN 274
K ++++++ S + +++E M G L+ Y+ S +N +L + + +
Sbjct: 68 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 127
Query: 275 IMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 334
+ ++A + YL+ + +H DL N ++ ++ + DF + + + D +
Sbjct: 128 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGK 184
Query: 335 TLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLP 394
L + +M+PE ++G +T DV+SFG++L E T + + + E L+
Sbjct: 185 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------- 237
Query: 395 ISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454
V+ LL + D C + L C +P+ R + EI++ + + +
Sbjct: 238 -----VMEGGLLDKPD-------NCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEP 285
Query: 455 LLRNV 459
R V
Sbjct: 286 GFREV 290
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 175 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKV 234
F++ IG+G FG V+K +V A+K D+E + + I V
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVV----------AIKIIDLEEAEDEIEDIQQEITV 58
Query: 235 ISTCSNEEFKA------------LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASA 282
+S C + +++EY+ GS + LD Q I+ ++
Sbjct: 59 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKG 116
Query: 283 LEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
L+YLH S IH D+K +NVLL ++ L+DF +A LT D + + + T +M
Sbjct: 117 LDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFWM 171
Query: 343 APEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEI 378
APE ++ + D++S GI +E G+ P +E+
Sbjct: 172 APEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 181 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVIST 237
IG+G F V AR + G EVAVK+ + +L+ E +MK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
E+ LV+EY G + Y+ + + + R + SA++Y H + I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 298 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-TNG 356
DLK N+LLD +M ++DF + T ++ T + Y APE + +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEV 194
Query: 357 DVYSFGIMLMETFTGKKPTNEIFNGE 382
DV+S G++L +G P F+G+
Sbjct: 195 DVWSLGVILYTLVSGSLP----FDGQ 216
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 105/226 (46%), Gaps = 12/226 (5%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQ---CGRALKGFDVE 219
L + + T+ F + ++ G FG+VYK G+ +++ V + L+ +A K E
Sbjct: 16 LRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
+M S+ + ++ +++ C + L+++ MP G L Y+ + LN + +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
A + YL ++H DL NVL+ ++DF +AKLL E++ I
Sbjct: 134 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 340 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+MA E + DV+S+G+ + E T G KP + I E++
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 14/207 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSIRH 228
+ F +G+G FG+VY AR + A+KV F Q +A E E+ +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
N++++ + L+LEY P G++ + + + D + + ++A+AL Y H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALSYCH- 129
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +IH D+KP N+LL N ++DF + S +T T+ Y+ PE
Sbjct: 130 --SKRVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMI- 182
Query: 349 EGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E G P
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 181 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVIST 237
IG+G F V AR + G EVAVK+ + +L+ E +MK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
E+ LV+EY G + Y+ + + + R + SA++Y H + I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 298 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-TNG 356
DLK N+LLD +M ++DF + T ++ T + Y APE + +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEV 194
Query: 357 DVYSFGIMLMETFTGKKPTNEIFNGE 382
DV+S G++L +G P F+G+
Sbjct: 195 DVWSLGVILYTLVSGSLP----FDGQ 216
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 175 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKV 234
F++ IG+G FG V+K +V A+K D+E + + I V
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVV----------AIKIIDLEEAEDEIEDIQQEITV 73
Query: 235 ISTCSNEEFKA------------LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASA 282
+S C + +++EY+ GS + LD Q I+ ++
Sbjct: 74 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKG 131
Query: 283 LEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
L+YLH S IH D+K +NVLL ++ L+DF +A LT D + + + T +M
Sbjct: 132 LDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWM 186
Query: 343 APEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEI 378
APE ++ + D++S GI +E G+ P +E+
Sbjct: 187 APEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 222
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 121/286 (42%), Gaps = 39/286 (13%)
Query: 181 IGRGGFGSVYKARLGDGME------VAVKVFNLQCG-RALKGFDVECEMMKSIRHRNLIK 233
+G+G FG VY+ D ++ VAVK N R F E +MK ++++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILD---------IFQRLNIMIDVASALE 284
++ S + +V+E M HG L+ Y+ S + + + + + ++A +
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 285 YLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
YL+ + +H +L N ++ + + DF + + + D + L + +MAP
Sbjct: 146 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN 404
E ++G +T+ D++SFG++L E + + + + E LK V+
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 250
Query: 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLK 450
L Q D C V +L C +P R EIV LLK
Sbjct: 251 YLDQPD-------NCPERVTDLMRMCWQFNPNMRPTFLEIV-NLLK 288
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 121/286 (42%), Gaps = 39/286 (13%)
Query: 181 IGRGGFGSVYKARLGDGME------VAVKVFNLQCG-RALKGFDVECEMMKSIRHRNLIK 233
+G+G FG VY+ D ++ VAVK N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILD---------IFQRLNIMIDVASALE 284
++ S + +V+E M HG L+ Y+ S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 285 YLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
YL+ + +H +L N ++ + + DF + + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN 404
E ++G +T+ D++SFG++L E + + + + E LK V+
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 249
Query: 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLK 450
L Q D C V +L C +P R EIV LLK
Sbjct: 250 YLDQPD-------NCPERVTDLMRMCWQFNPNMRPTFLEIV-NLLK 287
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSI 226
A + F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
RH N++++ + L+LEY P G++ + + + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H S +IH D+KP N+LL ++DF + S + T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEM 177
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E GK P
Sbjct: 178 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 175 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKV 234
F++ IG+G FG V+K +V A+K D+E + + I V
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVV----------AIKIIDLEEAEDEIEDIQQEITV 78
Query: 235 ISTCSNEEFKA------------LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASA 282
+S C + +++EY+ GS + LD Q I+ ++
Sbjct: 79 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKG 136
Query: 283 LEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
L+YLH S IH D+K +NVLL ++ L+DF +A LT D + + + T +M
Sbjct: 137 LDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFWM 191
Query: 343 APEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEI 378
APE ++ + D++S GI +E G+ P +E+
Sbjct: 192 APEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 227
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 12/226 (5%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQ---CGRALKGFDVE 219
L + + T+ F + ++G G FG+VYK G+ +++ V + L+ +A K E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
+M S+ + ++ +++ C + L+ + MP G L Y+ + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
A + YL ++H DL NVL+ ++DF AKLL E++ I
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 183
Query: 340 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+MA E + DV+S+G+ + E T G KP + I E++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 93/199 (46%), Gaps = 18/199 (9%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVF-NLQCGRALKGFDV-ECEMMKSIRHRNLIKVIST 237
IG G +G V+K R D G VA+K F + +K + E M+K ++H NL+ ++
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVAS----ALEYLHFGYSAP 293
+ LV EY H L + LD +QR V S L+ ++F +
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHE--------LDRYQRGVPEHLVKSITWQTLQAVNFCHKHN 122
Query: 294 IIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE-YGREGRV 352
IH D+KP N+L+ + V L DF A+LLTG S +AT Y +PE + +
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLLTGP--SDYYDDEVATRWYRSPELLVGDTQY 180
Query: 353 STNGDVYSFGIMLMETFTG 371
DV++ G + E +G
Sbjct: 181 GPPVDVWAIGCVFAELLSG 199
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 11/204 (5%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G FG VYKA+ + + A KV + + L+ + VE +++ S H N++K++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
E +++E+ G+++ M L Q + AL YLH IIH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 161
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY-----GREGRVST 354
K N+L + L+DF ++ T Q + + T +MAPE ++
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRXIQR--RDSFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 355 NGDVYSFGIMLMETFTGKKPTNEI 378
DV+S GI L+E + P +E+
Sbjct: 220 KADVWSLGITLIEMAEIEPPHHEL 243
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 12/226 (5%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQ---CGRALKGFDVE 219
L + + T+ F + ++G G FG+VYK G+ +++ V + L+ +A K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
+M S+ + ++ +++ C + L+ + MP G L Y+ + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
A + YL ++H DL NVL+ ++DF AKLL E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 340 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+MA E + DV+S+G+ + E T G KP + I E++
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSI 226
A + F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
RH N++++ + L+LEY P G++ + + + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H S +IH D+KP N+LL ++DF + S + T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEM 177
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E GK P
Sbjct: 178 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSI 226
A + F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
RH N++++ + L+LEY P G++ + + + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H S +IH D+KP N+LL ++DF + S + T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEM 180
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E GK P
Sbjct: 181 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSI 226
A + F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
RH N++++ + L+LEY P G++ + + + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H S +IH D+KP N+LL ++DF + S + T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPPEM 180
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E GK P
Sbjct: 181 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSI 226
A + F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
RH N++++ + L+LEY P G++ + + + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H S +IH D+KP N+LL +++F + S +T T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPPEM 180
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E GK P
Sbjct: 181 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 11/204 (5%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G FG VYKA+ + + A KV + + L+ + VE +++ S H N++K++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
E +++E+ G+++ M L Q + AL YLH IIH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 161
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY-----GREGRVST 354
K N+L + L+DF ++ T Q + + T +MAPE ++
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRTIQR--RDSFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 355 NGDVYSFGIMLMETFTGKKPTNEI 378
DV+S GI L+E + P +E+
Sbjct: 220 KADVWSLGITLIEMAEIEPPHHEL 243
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 12/226 (5%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQ---CGRALKGFDVE 219
L + + T+ F + ++G G FG+VYK G+ +++ V + L+ +A K E
Sbjct: 16 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
+M S+ + ++ +++ C + L+ + MP G L Y+ + LN + +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
A + YL ++H DL NVL+ ++DF AKLL E++ I
Sbjct: 134 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 190
Query: 340 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+MA E + DV+S+G+ + E T G KP + I E++
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSI 226
A + F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
RH N++++ + L+LEY P G++ + + + D + + ++A+AL Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 126
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H S +IH D+KP N+LL +++F + S +T T+ Y+ PE
Sbjct: 127 H---SKRVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPPEM 179
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E GK P
Sbjct: 180 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 11/204 (5%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G G FG VYKA+ + + A KV + + L+ + VE +++ S H N++K++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
E +++E+ G+++ M L Q + AL YLH IIH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 161
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY-----GREGRVST 354
K N+L + L+DF ++ T Q + + T +MAPE ++
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRXIQR--RDXFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 355 NGDVYSFGIMLMETFTGKKPTNEI 378
DV+S GI L+E + P +E+
Sbjct: 220 KADVWSLGITLIEMAEIEPPHHEL 243
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSI 226
A + F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
RH N++++ + L+LEY P G++ + + + D + + ++A+AL Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 126
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H S +IH D+KP N+LL ++DF + S + T+ Y+ PE
Sbjct: 127 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEM 179
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E GK P
Sbjct: 180 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSI 226
A + F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
RH N++++ + L+LEY P G++ + + + D + + ++A+AL Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 150
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H S +IH D+KP N+LL ++DF + S + T+ Y+ PE
Sbjct: 151 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPPEM 203
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E GK P
Sbjct: 204 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 121/286 (42%), Gaps = 39/286 (13%)
Query: 181 IGRGGFGSVYKARLGDGME------VAVKVFNLQCG-RALKGFDVECEMMKSIRHRNLIK 233
+G+G FG VY+ D ++ VAVK N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILD---------IFQRLNIMIDVASALE 284
++ S + +V+E M HG L+ Y+ S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 285 YLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
YL+ + +H DL N ++ + + DF + + + + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN 404
E ++G +T+ D++SFG++L E + + + + E LK V+
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 249
Query: 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLK 450
L Q D C V +L C +P+ R EIV LLK
Sbjct: 250 YLDQPD-------NCPERVTDLMRMCWQFNPKMRPTFLEIV-NLLK 287
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSI 226
A + F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
RH N++++ + L+LEY P G++ + + + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H S +IH D+KP N+LL ++DF + S + T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEM 180
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E GK P
Sbjct: 181 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 181 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVIST 237
IG+G F V AR + G EVAV++ + +L+ E +MK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
E+ LV+EY G + Y+ + + + R + SA++Y H + I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 298 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-TNG 356
DLK N+LLD +M ++DF + T ++ T + Y APE + +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEV 194
Query: 357 DVYSFGIMLMETFTGKKPTNEIFNGE 382
DV+S G++L +G P F+G+
Sbjct: 195 DVWSLGVILYTLVSGSLP----FDGQ 216
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 29/229 (12%)
Query: 174 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIK 233
+++ +IG G FG VY+A+L D E+ LQ R + E ++M+ + H N+++
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 85
Query: 234 V------ISTCSNEEFKALVLEYMP---HGSLEKYMYSSNYILDIFQRLNIMIDVASALE 284
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 144
Query: 285 YLH-FGYSAPIIHCDLKPSNVLLD-DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
Y+H FG I H D+KP N+LLD D V L DF AK L + +++ + + Y
Sbjct: 145 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYR 197
Query: 343 APE--YGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWV 389
APE +G S+ DV+S G +L E G+ IF G+ + V
Sbjct: 198 APELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLV 241
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSI 226
A + F +G+G FG+VY AR + A+KV F Q +A E E+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
RH N++++ + L+LEY P G++ + + + D + + ++A+AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 125
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
H S +IH D+KP N+LL ++DF + S + T+ Y+ PE
Sbjct: 126 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDTLCGTLDYLPPEM 178
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E GK P
Sbjct: 179 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 29/229 (12%)
Query: 174 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIK 233
+++ +IG G FG VY+A+L D E+ LQ R + E ++M+ + H N+++
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 96
Query: 234 V------ISTCSNEEFKALVLEYMP---HGSLEKYMYSSNYILDIFQRLNIMIDVASALE 284
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 155
Query: 285 YLH-FGYSAPIIHCDLKPSNVLLD-DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
Y+H FG I H D+KP N+LLD D V L DF AK L + +++ + + Y
Sbjct: 156 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYR 208
Query: 343 APE--YGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWV 389
APE +G S+ DV+S G +L E G+ IF G+ + V
Sbjct: 209 APELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLV 252
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 98/223 (43%), Gaps = 37/223 (16%)
Query: 175 FSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCGR--------ALKGFDVECEMMKS 225
+ ++IGRG V + G E AVK+ + R + E +++
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 226 IR-HRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALE 284
+ H ++I +I + + F LV + M G L Y+ + L + +IM + A+
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-TEKVALSEKETRSIMRSLLEAVS 214
Query: 285 YLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIA-KLLTGEDQSMTQTQTLATIGYMA 343
+LH + I+H DLKP N+LLDDNM LSDF + L GE + T GY+A
Sbjct: 215 FLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE----KLRELCGTPGYLA 267
Query: 344 PE------------YGREGRVSTNGDVYSFGIMLMETFTGKKP 374
PE YG+E D+++ G++L G P
Sbjct: 268 PEILKCSMDETHPGYGKE------VDLWACGVILFTLLAGSPP 304
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 29/229 (12%)
Query: 174 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIK 233
+++ +IG G FG VY+A+L D E+ LQ R + E ++M+ + H N+++
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 78
Query: 234 V------ISTCSNEEFKALVLEYMP---HGSLEKYMYSSNYILDIFQRLNIMIDVASALE 284
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 137
Query: 285 YLH-FGYSAPIIHCDLKPSNVLLD-DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
Y+H FG I H D+KP N+LLD D V L DF AK L + +++ + + Y
Sbjct: 138 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYR 190
Query: 343 APE--YGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWV 389
APE +G S+ DV+S G +L E G+ IF G+ + V
Sbjct: 191 APELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLV 234
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 12/226 (5%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQ---CGRALKGFDVE 219
L + + T+ F + ++ G FG+VYK G+ +++ V + L+ +A K E
Sbjct: 9 LRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
+M S+ + ++ +++ C + L+ + MP G L Y+ + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
A + YL ++H DL NVL+ ++DF +AKLL E++ I
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 340 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+MA E + DV+S+G+ + E T G KP + I E++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 116/285 (40%), Gaps = 40/285 (14%)
Query: 181 IGRGGFGSVYKARLG------DGMEVAVKVFNLQCGRALK-GFDVECEMMKSIRHRNLIK 233
+G G FG VY+ ++ ++VAVK C + F +E ++ + H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMY------SSNYILDIFQRLNIMIDVASALEYLH 287
I + ++LE M G L+ ++ S L + L++ D+A +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 288 FGYSAPIIHCDLKPSNVLLD---DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
+ IH D+ N LL VA + DF +A+ + + + +M P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGA 403
E EG ++ D +SFG++L E F+ G P N E+ +E V +
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV--------------LEFVTS 261
Query: 404 NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
+ C V+ + +C PE R N I+ ++
Sbjct: 262 GG------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 29/229 (12%)
Query: 174 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIK 233
+++ +IG G FG VY+A+L D E+ LQ R + E ++M+ + H N+++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 77
Query: 234 V------ISTCSNEEFKALVLEYMP---HGSLEKYMYSSNYILDIFQRLNIMIDVASALE 284
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 285 YLH-FGYSAPIIHCDLKPSNVLLD-DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
Y+H FG I H D+KP N+LLD D V L DF AK L + +++ + + Y
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYR 189
Query: 343 APE--YGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWV 389
APE +G S+ DV+S G +L E G+ IF G+ + V
Sbjct: 190 APELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLV 233
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 29/229 (12%)
Query: 174 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIK 233
+++ +IG G FG VY+A+L D E+ LQ R + E ++M+ + H N+++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 77
Query: 234 V------ISTCSNEEFKALVLEYMP---HGSLEKYMYSSNYILDIFQRLNIMIDVASALE 284
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 285 YLH-FGYSAPIIHCDLKPSNVLLD-DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
Y+H FG I H D+KP N+LLD D V L DF AK L + +++ + + Y
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYR 189
Query: 343 APE--YGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWV 389
APE +G S+ DV+S G +L E G+ IF G+ + V
Sbjct: 190 APELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLV 233
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 12/226 (5%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARL---GDGMEVAVKVFNLQ---CGRALKGFDVE 219
L + + T+ F + ++ G FG+VYK G+ +++ V + L+ +A K E
Sbjct: 16 LRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 220 CEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
+M S+ + ++ +++ C + L+ + MP G L Y+ + LN + +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
A + YL ++H DL NVL+ ++DF +AKLL E++ I
Sbjct: 134 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 340 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMT 384
+MA E + DV+S+G+ + E T G KP + I E++
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 116/285 (40%), Gaps = 40/285 (14%)
Query: 181 IGRGGFGSVYKARLG------DGMEVAVKVFNLQCGRALK-GFDVECEMMKSIRHRNLIK 233
+G G FG VY+ ++ ++VAVK C + F +E ++ + H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMY------SSNYILDIFQRLNIMIDVASALEYLH 287
I + ++LE M G L+ ++ S L + L++ D+A +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 288 FGYSAPIIHCDLKPSNVLLD---DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
+ IH D+ N LL VA + DF +A+ + + + +M P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGA 403
E EG ++ D +SFG++L E F+ G P N E+ +E V +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV--------------LEFVTS 275
Query: 404 NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
+ C V+ + +C PE R N I+ ++
Sbjct: 276 GG------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 29/229 (12%)
Query: 174 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIK 233
+++ +IG G FG VY+A+L D E+ LQ R + E ++M+ + H N+++
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 89
Query: 234 V------ISTCSNEEFKALVLEYMP---HGSLEKYMYSSNYILDIFQRLNIMIDVASALE 284
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 148
Query: 285 YLH-FGYSAPIIHCDLKPSNVLLD-DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
Y+H FG I H D+KP N+LLD D V L DF AK L + +++ + + Y
Sbjct: 149 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYR 201
Query: 343 APE--YGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWV 389
APE +G S+ DV+S G +L E G+ IF G+ + V
Sbjct: 202 APELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLV 245
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 116/278 (41%), Gaps = 33/278 (11%)
Query: 181 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCGRALKGFDVECEMMKSIRHRNLIKVI 235
IG G FG V Y + M VA+K N + F E M+ H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 236 STCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPII 295
+ E +++E G L ++ Y LD+ + +++AL YL S +
Sbjct: 78 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 296 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ-TQTLATIGYMAPEYGREGRVST 354
H D+ NVL+ N L DF +++ + ED + + ++ I +MAPE R ++
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 355 NGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHF 413
DV+ FG+ + E G KP + N ++ + + LP+
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP---------------- 235
Query: 414 VAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKI 451
C +++L +C P +R E+ A+L I
Sbjct: 236 ----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 29/229 (12%)
Query: 174 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIK 233
+++ +IG G FG VY+A+L D E+ LQ R + E ++M+ + H N+++
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 111
Query: 234 V------ISTCSNEEFKALVLEYMP---HGSLEKYMYSSNYILDIFQRLNIMIDVASALE 284
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 170
Query: 285 YLH-FGYSAPIIHCDLKPSNVLLD-DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
Y+H FG I H D+KP N+LLD D V L DF AK L + +++ + + Y
Sbjct: 171 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYR 223
Query: 343 APE--YGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWV 389
APE +G S+ DV+S G +L E G+ IF G+ + V
Sbjct: 224 APELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLV 267
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 181 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVIST 237
IG+G F V AR + G EVAV++ + +L+ E +MK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
E+ LV+EY G + Y+ + + + R + SA++Y H + I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 298 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-TNG 356
DLK N+LLD +M ++DF + T ++ + + Y APE + +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DEFCGSPPYAAPELFQGKKYDGPEV 194
Query: 357 DVYSFGIMLMETFTGKKPTNEIFNGE 382
DV+S G++L +G P F+G+
Sbjct: 195 DVWSLGVILYTLVSGSLP----FDGQ 216
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 29/229 (12%)
Query: 174 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIK 233
+++ +IG G FG VY+A+L D E+ LQ R + E ++M+ + H N+++
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 89
Query: 234 V------ISTCSNEEFKALVLEYMP---HGSLEKYMYSSNYILDIFQRLNIMIDVASALE 284
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 148
Query: 285 YLH-FGYSAPIIHCDLKPSNVLLD-DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
Y+H FG I H D+KP N+LLD D V L DF AK L + +++ + + Y
Sbjct: 149 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYR 201
Query: 343 APE--YGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWV 389
APE +G S+ DV+S G +L E G+ IF G+ + V
Sbjct: 202 APELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLV 245
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 115/285 (40%), Gaps = 40/285 (14%)
Query: 181 IGRGGFGSVYKARLG------DGMEVAVKVFNLQCGRALK-GFDVECEMMKSIRHRNLIK 233
+G G FG VY+ ++ ++VAVK C + F +E ++ H+N+++
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMY------SSNYILDIFQRLNIMIDVASALEYLH 287
I + ++LE M G L+ ++ S L + L++ D+A +YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 288 FGYSAPIIHCDLKPSNVLLD---DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
+ IH D+ N LL VA + DF +A+ + + + +M P
Sbjct: 150 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGA 403
E EG ++ D +SFG++L E F+ G P N E+ +E V +
Sbjct: 207 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV--------------LEFVTS 252
Query: 404 NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
+ C V+ + +C PE R N I+ ++
Sbjct: 253 GG------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 291
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 29/229 (12%)
Query: 174 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIK 233
+++ +IG G FG VY+A+L D E+ LQ R + E ++M+ + H N+++
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 81
Query: 234 V------ISTCSNEEFKALVLEYMP---HGSLEKYMYSSNYILDIFQRLNIMIDVASALE 284
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 140
Query: 285 YLH-FGYSAPIIHCDLKPSNVLLD-DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
Y+H FG I H D+KP N+LLD D V L DF AK L + +++ + + Y
Sbjct: 141 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYR 193
Query: 343 APE--YGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWV 389
APE +G S+ DV+S G +L E G+ IF G+ + V
Sbjct: 194 APELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLV 237
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMMKS 225
+ F + IG G +G VYKAR G VA+K L A++ E ++K
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKE 65
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
+ H N++K++ E LV E++ H L+K+M +S L I + L+
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQG 122
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
L F +S ++H DLKP N+L++ L+DF +A+ + T T + T+ Y APE
Sbjct: 123 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPE 180
Query: 346 YGREGR-VSTNGDVYSFGIMLMETFTGK 372
+ ST D++S G + E T +
Sbjct: 181 ILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 29/229 (12%)
Query: 174 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIK 233
+++ +IG G FG VY+A+L D E+ LQ R + E ++M+ + H N+++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 77
Query: 234 V------ISTCSNEEFKALVLEYMP---HGSLEKYMYSSNYILDIFQRLNIMIDVASALE 284
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 285 YLH-FGYSAPIIHCDLKPSNVLLD-DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
Y+H FG I H D+KP N+LLD D V L DF AK L + +++ + + Y
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYR 189
Query: 343 APE--YGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWV 389
APE +G S+ DV+S G +L E G+ IF G+ + V
Sbjct: 190 APELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLV 233
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMMKS 225
+ F + IG G +G VYKAR G VA+K L A++ E ++K
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKE 58
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
+ H N++K++ E LV E++ H L+K+M +S L I + L+
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQG 115
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
L F +S ++H DLKP N+L++ L+DF +A+ + T T + T+ Y APE
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPE 173
Query: 346 YGREGR-VSTNGDVYSFGIMLMETFTGK 372
+ ST D++S G + E T +
Sbjct: 174 ILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
Query: 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLIXXXXXXXXXXXXXGAIPASLEKLSYLE 61
IP EIG + L L LG+N + G IPD GDL G IP ++ L+ L
Sbjct: 645 IPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLT 704
Query: 62 NLNLSFNKLEGEIPRGGPFRNFSVESFEGNELLCGSPNLQVPPCKTSN-----HH 111
++LS N L G IP G F F F N LCG P +P C SN HH
Sbjct: 705 EIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP---LPRCDPSNADGYAHH 756
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 32/76 (42%)
Query: 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLIXXXXXXXXXXXXXGAIPASLEKLSYLE 61
IP + L L L +N L G IP S G L G IP L + LE
Sbjct: 407 IPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLE 466
Query: 62 NLNLSFNKLEGEIPRG 77
L L FN L GEIP G
Sbjct: 467 TLILDFNDLTGEIPSG 482
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 1 VIPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLIXXXXXXXXXXXXXGAIPASLEKLSYL 60
IP+ +G L L L L N L+G IP + G IP+ L + L
Sbjct: 430 TIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNL 489
Query: 61 ENLNLSFNKLEGEIPRG-GPFRNFSV-----ESFEGN 91
++LS N+L GEIP+ G N ++ SF GN
Sbjct: 490 NWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 526
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 31/74 (41%)
Query: 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLIXXXXXXXXXXXXXGAIPASLEKLSYLE 61
IP E+ +K LE L L +N L G IP + G IP + +L L
Sbjct: 455 IPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLA 514
Query: 62 NLNLSFNKLEGEIP 75
L LS N G IP
Sbjct: 515 ILKLSNNSFSGNIP 528
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 24/57 (42%)
Query: 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLIXXXXXXXXXXXXXGAIPASLEKLS 58
IP IG L+NL L L N G IP GD G IPA++ K S
Sbjct: 503 IPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQS 559
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Query: 7 GGLKNLEYLFLGYNRLQGPIPDSFGDLIXXXXXXXXXXXXXGAIPA-SLEKLSYLENLNL 65
G L L L N G +P FG G +P +L K+ L+ L+L
Sbjct: 288 GACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDL 347
Query: 66 SFNKLEGEIPR 76
SFN+ GE+P
Sbjct: 348 SFNEFSGELPE 358
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 29/229 (12%)
Query: 174 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIK 233
+++ +IG G FG VY+A+L D E+ LQ R + E ++M+ + H N+++
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 90
Query: 234 V------ISTCSNEEFKALVLEYMP---HGSLEKYMYSSNYILDIFQRLNIMIDVASALE 284
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 149
Query: 285 YLH-FGYSAPIIHCDLKPSNVLLD-DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
Y+H FG I H D+KP N+LLD D V L DF AK L + +++ + + Y
Sbjct: 150 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYR 202
Query: 343 APE--YGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWV 389
APE +G S+ DV+S G +L E G+ IF G+ + V
Sbjct: 203 APELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLV 246
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMMKS 225
+ F + IG G +G VYKAR G VA+K L A++ E ++K
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKE 58
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
+ H N++K++ E LV E++ H L+K+M +S L I + L+
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQG 115
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
L F +S ++H DLKP N+L++ L+DF +A+ + T T + T+ Y APE
Sbjct: 116 LSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPE 173
Query: 346 YGREGR-VSTNGDVYSFGIMLMETFTGK 372
+ ST D++S G + E T +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 17/217 (7%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVFNLQCGRALKGFDVECEMMK 224
L++ + F + ++G+G FG V+ A + A+K L+ L DVEC M++
Sbjct: 11 LQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVE 68
Query: 225 ------SIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMID 278
+ H L + T +E V+EY+ G L Y S + D+ + +
Sbjct: 69 KRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL-MYHIQSCHKFDLSRATFYAAE 127
Query: 279 VASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKL-LTGEDQSMTQTQTLA 337
+ L++LH S I++ DLK N+LLD + ++DF + K + G+ ++ +
Sbjct: 128 IILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT---NEFCG 181
Query: 338 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
T Y+APE + + + D +SFG++L E G+ P
Sbjct: 182 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 175 FSENNLI-----GRGGFGSVYKA-------RLGDGMEVAVKVFNLQCGRA-LKGFDVECE 221
F NL+ G G FG V KA R G VAVK+ + L+ E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAG-YTTVAVKMLKENASPSELRDLLSEFN 78
Query: 222 MMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYI--------------- 266
++K + H ++IK+ CS + L++EY +GSL ++ S +
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 267 --------LDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFS 318
L + ++ ++ ++YL ++H DL N+L+ + +SDF
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 319 IAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 370
+++ + ED + ++Q + +MA E + +T DV+SFG++L E T
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 115/285 (40%), Gaps = 40/285 (14%)
Query: 181 IGRGGFGSVYKARLG------DGMEVAVKVFNLQCGRALK-GFDVECEMMKSIRHRNLIK 233
+G G FG VY+ ++ ++VAVK C + F +E ++ H+N+++
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMY------SSNYILDIFQRLNIMIDVASALEYLH 287
I + ++LE M G L+ ++ S L + L++ D+A +YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 288 FGYSAPIIHCDLKPSNVLLD---DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
+ IH D+ N LL VA + DF +A+ + + + +M P
Sbjct: 165 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 221
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGA 403
E EG ++ D +SFG++L E F+ G P N E+ +E V +
Sbjct: 222 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV--------------LEFVTS 267
Query: 404 NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
+ C V+ + +C PE R N I+ ++
Sbjct: 268 GG------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 306
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 175 FSENNLI-----GRGGFGSVYKA-------RLGDGMEVAVKVFNLQCGRA-LKGFDVECE 221
F NL+ G G FG V KA R G VAVK+ + L+ E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAG-YTTVAVKMLKENASPSELRDLLSEFN 78
Query: 222 MMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYI--------------- 266
++K + H ++IK+ CS + L++EY +GSL ++ S +
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 267 --------LDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFS 318
L + ++ ++ ++YL ++H DL N+L+ + +SDF
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLA---EMSLVHRDLAARNILVAEGRKMKISDFG 195
Query: 319 IAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 370
+++ + ED + ++Q + +MA E + +T DV+SFG++L E T
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 115/285 (40%), Gaps = 40/285 (14%)
Query: 181 IGRGGFGSVYKARLG------DGMEVAVKVFNLQCGRALK-GFDVECEMMKSIRHRNLIK 233
+G G FG VY+ ++ ++VAVK C + F +E ++ H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMY------SSNYILDIFQRLNIMIDVASALEYLH 287
I + ++LE M G L+ ++ S L + L++ D+A +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 288 FGYSAPIIHCDLKPSNVLLD---DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
+ IH D+ N LL VA + DF +A+ + + + +M P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGA 403
E EG ++ D +SFG++L E F+ G P N E+ +E V +
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV--------------LEFVTS 261
Query: 404 NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
+ C V+ + +C PE R N I+ ++
Sbjct: 262 GG------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 181 IGRGGFGSV----YKARLGDGMEVAVKVFNLQCGRA-LKGFDVECEMMKSIRHRNLIKVI 235
+G G FGSV Y+ R ++VA+KV +A + E ++M + + ++++I
Sbjct: 18 LGCGNFGSVRQGVYRMR-KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 236 STCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPII 295
C E LV+E G L K++ + + ++ V+ ++YL +
Sbjct: 77 GVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFV 132
Query: 296 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT-QTQTLATIGYMAPEYGREGRVST 354
H DL NVLL + A +SDF ++K L +D T ++ + + APE + S+
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 192
Query: 355 NGDVYSFGIMLMETFT-GKKPTNEIFNGEM 383
DV+S+G+ + E + G+KP ++ E+
Sbjct: 193 RSDVWSYGVTMWEALSYGQKPYKKMKGPEV 222
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 15/210 (7%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRA-LKGFDVECEMMKSIRHRN 230
D F +G G FG V+ G+E +K N + ++ + E E++KS+ H N
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNY---ILDIFQRLNIMIDVASALEYLH 287
+IK+ + +V+E G L + + S+ L +M + +AL Y H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 288 FGYSAPIIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
S ++H DLKP N+L D + + DF +A+L ++ S T T YMAP
Sbjct: 142 ---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS---TNAAGTALYMAP 195
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
E + V+ D++S G+++ TG P
Sbjct: 196 EVFKRD-VTFKCDIWSAGVVMYFLLTGCLP 224
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 115/285 (40%), Gaps = 40/285 (14%)
Query: 181 IGRGGFGSVYKARLG------DGMEVAVKVFNLQCGRALK-GFDVECEMMKSIRHRNLIK 233
+G G FG VY+ ++ ++VAVK C + F +E ++ H+N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMY------SSNYILDIFQRLNIMIDVASALEYLH 287
I + ++LE M G L+ ++ S L + L++ D+A +YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 288 FGYSAPIIHCDLKPSNVLLD---DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
+ IH D+ N LL VA + DF +A+ + + + +M P
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGA 403
E EG ++ D +SFG++L E F+ G P N E+ +E V +
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV--------------LEFVTS 260
Query: 404 NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
+ C V+ + +C PE R N I+ ++
Sbjct: 261 GG------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 299
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 12/209 (5%)
Query: 172 TDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRH 228
TD + IG+G F V + +L G E A K+ N + R + + E + + ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
N++++ + S E F LV + + G L + + + Y + + + LE +
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY----YSEADASHCIQQILEAVLH 118
Query: 289 GYSAPIIHCDLKPSNVLLDDN---MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
+ ++H DLKP N+LL L+DF +A + G+ Q+ T GY++PE
Sbjct: 119 CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPE 176
Query: 346 YGREGRVSTNGDVYSFGIMLMETFTGKKP 374
R+ D+++ G++L G P
Sbjct: 177 VLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMMKS 225
+ F + IG G +G VYKAR G VA+K L A++ E ++K
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKE 58
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
+ H N++K++ E LV E++ H L+K+M +S L I + L+
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQG 115
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
L F +S ++H DLKP N+L++ L+DF +A+ + T T + T+ Y APE
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPE 173
Query: 346 YGREGR-VSTNGDVYSFGIMLMETFTGK 372
+ ST D++S G + E T +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMMKS 225
+ F + IG G +G VYKAR G VA+K L A++ E ++K
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKE 57
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
+ H N++K++ E LV E++ H L+K+M +S L I + L+
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQG 114
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
L F +S ++H DLKP N+L++ L+DF +A+ + T T + T+ Y APE
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPE 172
Query: 346 YGREGR-VSTNGDVYSFGIMLMETFTGK 372
+ ST D++S G + E T +
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 29/229 (12%)
Query: 174 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIK 233
+++ +IG G FG VY+A+L D E+ LQ R + E ++M+ + H N+++
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 82
Query: 234 V------ISTCSNEEFKALVLEYMP---HGSLEKYMYSSNYILDIFQRLNIMIDVASALE 284
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 141
Query: 285 YLH-FGYSAPIIHCDLKPSNVLLD-DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
Y+H FG I H D+KP N+LLD D V L DF AK L + +++ + + Y
Sbjct: 142 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYR 194
Query: 343 APE--YGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWV 389
APE +G S+ DV+S G +L E G+ IF G+ + V
Sbjct: 195 APELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLV 238
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMMKS 225
+ F + IG G +G VYKAR G VA+K L A++ E ++K
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKE 57
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
+ H N++K++ E LV E++ H L+K+M +S L I + L+
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQG 114
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
L F +S ++H DLKP N+L++ L+DF +A+ + T T + T+ Y APE
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPE 172
Query: 346 YGREGR-VSTNGDVYSFGIMLMETFTGK 372
+ ST D++S G + E T +
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 29/229 (12%)
Query: 174 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIK 233
+++ +IG G FG VY+A+L D E+ LQ R + E ++M+ + H N+++
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 111
Query: 234 V------ISTCSNEEFKALVLEYMP---HGSLEKYMYSSNYILDIFQRLNIMIDVASALE 284
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 170
Query: 285 YLH-FGYSAPIIHCDLKPSNVLLD-DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
Y+H FG I H D+KP N+LLD D V L DF AK L + +++ + + Y
Sbjct: 171 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYR 223
Query: 343 APE--YGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWV 389
APE +G S+ DV+S G +L E G+ IF G+ + V
Sbjct: 224 APELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLV 267
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 29/229 (12%)
Query: 174 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIK 233
+++ +IG G FG VY+A+L D E+ LQ R + E ++M+ + H N+++
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 105
Query: 234 V------ISTCSNEEFKALVLEYMP---HGSLEKYMYSSNYILDIFQRLNIMIDVASALE 284
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 164
Query: 285 YLH-FGYSAPIIHCDLKPSNVLLD-DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
Y+H FG I H D+KP N+LLD D V L DF AK L + +++ + + Y
Sbjct: 165 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYR 217
Query: 343 APE--YGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWV 389
APE +G S+ DV+S G +L E G+ IF G+ + V
Sbjct: 218 APELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLV 261
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 110/228 (48%), Gaps = 29/228 (12%)
Query: 175 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKV 234
+++ +IG G FG VY+A+L D E+ LQ R + E ++M+ + H N++++
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRL 116
Query: 235 ------ISTCSNEEFKALVLEYMP---HGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
+E + LVL+Y+P + Y + + I+ +L M + +L Y
Sbjct: 117 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 175
Query: 286 LH-FGYSAPIIHCDLKPSNVLLD-DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
+H FG I H D+KP N+LLD D V L DF AK L + +++ + + Y A
Sbjct: 176 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRA 228
Query: 344 PE--YGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWV 389
PE +G S+ DV+S G +L E G+ IF G+ + V
Sbjct: 229 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLV 271
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 181 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVIST 237
IG+G F V AR + G EVAVK+ + +L+ E +MK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
E+ LV+EY G + Y+ + + + R + SA++Y H + I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 298 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-TNG 356
DLK N+LLD +M ++DF + T ++ Y APE + +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DAFCGAPPYAAPELFQGKKYDGPEV 194
Query: 357 DVYSFGIMLMETFTGKKPTNEIFNGE 382
DV+S G++L +G P F+G+
Sbjct: 195 DVWSLGVILYTLVSGSLP----FDGQ 216
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 22/224 (9%)
Query: 181 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFD---VECEMMKSIRHRNLIKVIS 236
+G G FG V+ R +G A+KV + LK + E M+ + H +I++
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 237 TCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIH 296
T + + ++++Y+ G L + S + + +V ALEYLH S II+
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALEYLH---SKDIIY 129
Query: 297 CDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG 356
DLKP N+LLD N ++DF AK + + T Y+APE + +
Sbjct: 130 RDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLC-----GTPDYIAPEVVSTKPYNKSI 184
Query: 357 DVYSFGIMLMETFTGKKP---------TNEIFNGEMTLKHWVND 391
D +SFGI++ E G P +I N E+ + N+
Sbjct: 185 DWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNE 228
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMMKS 225
+ F + IG G +G VYKAR G VA+K L A++ E ++K
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKE 62
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
+ H N++K++ E LV E++ H L+K+M +S L I + L+
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQG 119
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
L F +S ++H DLKP N+L++ L+DF +A+ + T T + T+ Y APE
Sbjct: 120 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPE 177
Query: 346 YGREGR-VSTNGDVYSFGIMLMETFTGK 372
+ ST D++S G + E T +
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMMKS 225
+ F + IG G +G VYKAR G VA+K L A++ E ++K
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKE 58
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
+ H N++K++ E LV E++ H L+K+M +S L I + L+
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQG 115
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
L F +S ++H DLKP N+L++ L+DF +A+ + T T + T+ Y APE
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPE 173
Query: 346 YGREGR-VSTNGDVYSFGIMLMETFTGK 372
+ ST D++S G + E T +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 110/228 (48%), Gaps = 29/228 (12%)
Query: 175 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKV 234
+++ +IG G FG VY+A+L D E+ LQ R + E ++M+ + H N++++
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRL 114
Query: 235 ------ISTCSNEEFKALVLEYMP---HGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
+E + LVL+Y+P + Y + + I+ +L M + +L Y
Sbjct: 115 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 173
Query: 286 LH-FGYSAPIIHCDLKPSNVLLD-DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
+H FG I H D+KP N+LLD D V L DF AK L + +++ + + Y A
Sbjct: 174 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRA 226
Query: 344 PE--YGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWV 389
PE +G S+ DV+S G +L E G+ IF G+ + V
Sbjct: 227 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLV 269
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLIXXXXXXXXXXXXXGAIPASLEKLSYLE 61
IP EIG + L L LG+N + G IPD GDL G IP ++ L+ L
Sbjct: 648 IPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLT 707
Query: 62 NLNLSFNKLEGEIPRGGPFRNFSVESFEGNELLCGSPNLQVPPCKTSN 109
++LS N L G IP G F F F N LCG P +P C SN
Sbjct: 708 EIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP---LPRCDPSN 752
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 32/76 (42%)
Query: 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLIXXXXXXXXXXXXXGAIPASLEKLSYLE 61
IP + L L L +N L G IP S G L G IP L + LE
Sbjct: 410 IPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLE 469
Query: 62 NLNLSFNKLEGEIPRG 77
L L FN L GEIP G
Sbjct: 470 TLILDFNDLTGEIPSG 485
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 1 VIPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLIXXXXXXXXXXXXXGAIPASLEKLSYL 60
IP+ +G L L L L N L+G IP + G IP+ L + L
Sbjct: 433 TIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNL 492
Query: 61 ENLNLSFNKLEGEIPRG-GPFRNFSV-----ESFEGN 91
++LS N+L GEIP+ G N ++ SF GN
Sbjct: 493 NWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 529
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 31/74 (41%)
Query: 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLIXXXXXXXXXXXXXGAIPASLEKLSYLE 61
IP E+ +K LE L L +N L G IP + G IP + +L L
Sbjct: 458 IPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLA 517
Query: 62 NLNLSFNKLEGEIP 75
L LS N G IP
Sbjct: 518 ILKLSNNSFSGNIP 531
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 24/57 (42%)
Query: 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLIXXXXXXXXXXXXXGAIPASLEKLS 58
IP IG L+NL L L N G IP GD G IPA++ K S
Sbjct: 506 IPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQS 562
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Query: 7 GGLKNLEYLFLGYNRLQGPIPDSFGDLIXXXXXXXXXXXXXGAIPA-SLEKLSYLENLNL 65
G L L L N G +P FG G +P +L K+ L+ L+L
Sbjct: 291 GACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDL 350
Query: 66 SFNKLEGEIPR 76
SFN+ GE+P
Sbjct: 351 SFNEFSGELPE 361
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMMKS 225
+ F + IG G +G VYKAR G VA+K L A++ E ++K
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKE 65
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
+ H N++K++ E LV E++ H L+K+M +S L I + L+
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQG 122
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
L F +S ++H DLKP N+L++ L+DF +A+ + T T + T+ Y APE
Sbjct: 123 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPE 180
Query: 346 YGREGR-VSTNGDVYSFGIMLMETFTGK 372
+ ST D++S G + E T +
Sbjct: 181 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMM 223
+ + F + IG G +G VYKAR G VA+K L A++ E ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLL 57
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
K + H N++K++ E LV E++ H L+K+M +S L I + L
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLL 114
Query: 284 EYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
+ L F +S ++H DLKP N+L++ L+DF +A+ + T T + T+ Y A
Sbjct: 115 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRA 172
Query: 344 PEYGREGR-VSTNGDVYSFGIMLMETFTGK 372
PE + ST D++S G + E T +
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 175 FSENNLI-----GRGGFGSVYKA-------RLGDGMEVAVKVFNLQCGRA-LKGFDVECE 221
F NL+ G G FG V KA R G VAVK+ + L+ E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAG-YTTVAVKMLKENASPSELRDLLSEFN 78
Query: 222 MMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYI--------------- 266
++K + H ++IK+ CS + L++EY +GSL ++ S +
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 267 --------LDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFS 318
L + ++ ++ ++YL ++H DL N+L+ + +SDF
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 319 IAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 370
+++ + ED + ++Q + +MA E + +T DV+SFG++L E T
Sbjct: 196 LSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 115/285 (40%), Gaps = 40/285 (14%)
Query: 181 IGRGGFGSVYKARLG------DGMEVAVKVFNLQCGRALK-GFDVECEMMKSIRHRNLIK 233
+G G FG VY+ ++ ++VAVK C + F +E ++ H+N+++
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMY------SSNYILDIFQRLNIMIDVASALEYLH 287
I + ++LE M G L+ ++ S L + L++ D+A +YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 288 FGYSAPIIHCDLKPSNVLLD---DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
+ IH D+ N LL VA + DF +A+ + + + +M P
Sbjct: 175 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGA 403
E EG ++ D +SFG++L E F+ G P N E+ +E V +
Sbjct: 232 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV--------------LEFVTS 277
Query: 404 NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
+ C V+ + +C PE R N I+ ++
Sbjct: 278 GG------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 316
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 115/285 (40%), Gaps = 40/285 (14%)
Query: 181 IGRGGFGSVYKARLG------DGMEVAVKVFNLQCGRALK-GFDVECEMMKSIRHRNLIK 233
+G G FG VY+ ++ ++VAVK C + F +E ++ H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMY------SSNYILDIFQRLNIMIDVASALEYLH 287
I + ++LE M G L+ ++ S L + L++ D+A +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 288 FGYSAPIIHCDLKPSNVLLD---DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
+ IH D+ N LL VA + DF +A+ + + + +M P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGA 403
E EG ++ D +SFG++L E F+ G P N E+ +E V +
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV--------------LEFVTS 261
Query: 404 NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
+ C V+ + +C PE R N I+ ++
Sbjct: 262 GG------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 110/228 (48%), Gaps = 29/228 (12%)
Query: 175 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKV 234
+++ +IG G FG VY+A+L D E+ LQ R + E ++M+ + H N++++
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVRL 157
Query: 235 ------ISTCSNEEFKALVLEYMP---HGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
+E + LVL+Y+P + Y + + I+ +L M + +L Y
Sbjct: 158 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 216
Query: 286 LH-FGYSAPIIHCDLKPSNVLLD-DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
+H FG I H D+KP N+LLD D V L DF AK L + +++ + + Y A
Sbjct: 217 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRA 269
Query: 344 PE--YGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWV 389
PE +G S+ DV+S G +L E G+ IF G+ + V
Sbjct: 270 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLV 312
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 14/207 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGDGMEV-AVKV-FNLQCGRA--LKGFDVECEMMKSIRH 228
+ F +G+G FG+VY AR + A+KV F Q +A E E+ +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
N++++ + L+LEY P G++ + + + D + + ++A+AL Y H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALSYCH- 129
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +IH D+KP N+LL N ++DF + S + T+ Y+ PE
Sbjct: 130 --SKRVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRDTLCGTLDYLPPEMI- 182
Query: 349 EGRVSTNG-DVYSFGIMLMETFTGKKP 374
EGR+ D++S G++ E G P
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 115/285 (40%), Gaps = 40/285 (14%)
Query: 181 IGRGGFGSVYKARLG------DGMEVAVKVFNLQCGRALK-GFDVECEMMKSIRHRNLIK 233
+G G FG VY+ ++ ++VAVK C + F +E ++ H+N+++
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMY------SSNYILDIFQRLNIMIDVASALEYLH 287
I + ++LE M G L+ ++ S L + L++ D+A +YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 288 FGYSAPIIHCDLKPSNVLLD---DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
+ IH D+ N LL VA + DF +A+ + + + +M P
Sbjct: 185 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 241
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGA 403
E EG ++ D +SFG++L E F+ G P N E+ +E V +
Sbjct: 242 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV--------------LEFVTS 287
Query: 404 NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
+ C V+ + +C PE R N I+ ++
Sbjct: 288 G------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 326
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 115/285 (40%), Gaps = 40/285 (14%)
Query: 181 IGRGGFGSVYKARLG------DGMEVAVKVFNLQCGRALK-GFDVECEMMKSIRHRNLIK 233
+G G FG VY+ ++ ++VAVK C + F +E ++ H+N+++
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMY------SSNYILDIFQRLNIMIDVASALEYLH 287
I + ++LE M G L+ ++ S L + L++ D+A +YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 288 FGYSAPIIHCDLKPSNVLLD---DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
+ IH D+ N LL VA + DF +A+ + + + +M P
Sbjct: 176 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGA 403
E EG ++ D +SFG++L E F+ G P N E+ +E V +
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV--------------LEFVTS 278
Query: 404 NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
+ C V+ + +C PE R N I+ ++
Sbjct: 279 GG------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 317
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 11/205 (5%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDV----ECEMMKSIRH 228
+ F + IG G +G VYKAR EV V + ++ +G E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
N++K++ E LV E++ H L+K+M +S L I + L+ L F
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAF 118
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
+S ++H DLKP N+L++ L+DF +A+ + T T + T+ Y APE
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILL 176
Query: 349 EGR-VSTNGDVYSFGIMLMETFTGK 372
+ ST D++S G + E T +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 11/205 (5%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDV----ECEMMKSIRH 228
+ F + IG G +G VYKAR EV V + ++ +G E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
N++K++ E LV E++ H L+K+M +S L I + L+ L F
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAF 117
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
+S ++H DLKP N+L++ L+DF +A+ + T T + T+ Y APE
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILL 175
Query: 349 EGR-VSTNGDVYSFGIMLMETFTGK 372
+ ST D++S G + E T +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 18/212 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFD---VECEMMKSIRH 228
D F + ++GRGGFG V+ ++ G A K N + + KG+ VE +++ +
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMI---DVASALEY 285
R ++ + + LV+ M G + ++Y+ + FQ + + S LE+
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAP 344
LH II+ DLKP NVLLDD+ +SD +A L T+T+ A T G+MAP
Sbjct: 305 LH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA---GQTKTKGYAGTPGFMAP 358
Query: 345 E--YGREGRVSTNGDVYSFGIMLMETFTGKKP 374
E G E S D ++ G+ L E + P
Sbjct: 359 ELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 115/285 (40%), Gaps = 40/285 (14%)
Query: 181 IGRGGFGSVYKARLG------DGMEVAVKVFNLQCGRALK-GFDVECEMMKSIRHRNLIK 233
+G G FG VY+ ++ ++VAVK C + F +E ++ H+N+++
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMY------SSNYILDIFQRLNIMIDVASALEYLH 287
I + ++LE M G L+ ++ S L + L++ D+A +YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 288 FGYSAPIIHCDLKPSNVLLD---DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
+ IH D+ N LL VA + DF +A+ + + + +M P
Sbjct: 199 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGA 403
E EG ++ D +SFG++L E F+ G P N E+ +E V +
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV--------------LEFVTS 301
Query: 404 NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
+ C V+ + +C PE R N I+ ++
Sbjct: 302 GG------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 340
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 116/278 (41%), Gaps = 33/278 (11%)
Query: 181 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCGRALKGFDVECEMMKSIRHRNLIKVI 235
IG G FG V Y + M VA+K N + F E M+ H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 236 STCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPII 295
+ E +++E G L ++ + LD+ + +++AL YL S +
Sbjct: 78 GVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 296 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ-TQTLATIGYMAPEYGREGRVST 354
H D+ NVL+ N L DF +++ + ED + + ++ I +MAPE R ++
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTXXKASKGKLPIKWMAPESINFRRFTS 191
Query: 355 NGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHF 413
DV+ FG+ + E G KP + N ++ + + LP+
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP---------------- 235
Query: 414 VAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKI 451
C +++L +C P +R E+ A+L I
Sbjct: 236 ----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 131/305 (42%), Gaps = 38/305 (12%)
Query: 171 ATDGFSENNLIGRGGFGSVY----KARLGDGME--VAVKVFNLQCG-RALKGFDVECEMM 223
A + + + +G+G FG VY K + D E VA+K N R F E +M
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYS------SNYIL---DIFQRLN 274
K ++++++ S + +++E M G L+ Y+ S +N +L + + +
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 129
Query: 275 IMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 334
+ ++A + YL+ + +H DL N + ++ + DF + + + D +
Sbjct: 130 MAGEIADGMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGK 186
Query: 335 TLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLP 394
L + +M+PE ++G +T DV+SFG++L E T + + + E L+
Sbjct: 187 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------- 239
Query: 395 ISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454
V+ LL + D C + L C +P+ R + EI++ + + +
Sbjct: 240 -----VMEGGLLDKPD-------NCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEP 287
Query: 455 LLRNV 459
R V
Sbjct: 288 GFREV 292
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 37/220 (16%)
Query: 175 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKV 234
F++ + IG+G FG VYK EV A+K D+E + + I V
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVV----------AIKIIDLEEAEDEIEDIQQEITV 70
Query: 235 ISTCSNEEFKA------------LVLEYMPHGS----LEKYMYSSNYILDIFQRLNIMID 278
+S C + +++EY+ GS L+ YI I + +
Sbjct: 71 LSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILR------E 124
Query: 279 VASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLAT 338
+ L+YLH S IH D+K +NVLL + L+DF +A LT D + + + T
Sbjct: 125 ILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNXFVGT 179
Query: 339 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEI 378
+MAPE ++ D++S GI +E G+ P +++
Sbjct: 180 PFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDL 219
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 18/212 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFD---VECEMMKSIRH 228
D F + ++GRGGFG V+ ++ G A K N + + KG+ VE +++ +
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMI---DVASALEY 285
R ++ + + LV+ M G + ++Y+ + FQ + + S LE+
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAP 344
LH II+ DLKP NVLLDD+ +SD +A L T+T+ A T G+MAP
Sbjct: 305 LH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA---GQTKTKGYAGTPGFMAP 358
Query: 345 E--YGREGRVSTNGDVYSFGIMLMETFTGKKP 374
E G E S D ++ G+ L E + P
Sbjct: 359 ELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 115/285 (40%), Gaps = 40/285 (14%)
Query: 181 IGRGGFGSVYKARLG------DGMEVAVKVFNLQCGRALK-GFDVECEMMKSIRHRNLIK 233
+G G FG VY+ ++ ++VAVK C + F +E ++ H+N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMY------SSNYILDIFQRLNIMIDVASALEYLH 287
I + +++E M G L+ ++ S L + L++ D+A +YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 288 FGYSAPIIHCDLKPSNVLLD---DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
+ IH D+ N LL VA + DF +A+ + + + +M P
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGA 403
E EG ++ D +SFG++L E F+ G P N E+ +E V +
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV--------------LEFVTS 260
Query: 404 NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
+ C V+ + +C PE R N I+ ++
Sbjct: 261 GG------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 299
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 28/216 (12%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNL 231
+ FS + +IGRGGFG VY R D G A+K + + + +G + ++ R +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL------ALNERIM 242
Query: 232 IKVIST-------CSNEEFK-----ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
+ ++ST C + F + +L+ M G L ++ + R ++
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEI 301
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
LE++H + +++ DLKP+N+LLD++ +SD +A + + ++ T
Sbjct: 302 ILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTH 354
Query: 340 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTGKKP 374
GYMAPE ++G ++ D +S G ML + G P
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 28/216 (12%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNL 231
+ FS + +IGRGGFG VY R D G A+K + + + +G + ++ R +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL------ALNERIM 242
Query: 232 IKVIST-------CSNEEFK-----ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
+ ++ST C + F + +L+ M G L ++ + R ++
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEI 301
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATI 339
LE++H + +++ DLKP+N+LLD++ +SD +A + + ++ T
Sbjct: 302 ILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTH 354
Query: 340 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTGKKP 374
GYMAPE ++G ++ D +S G ML + G P
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 18/212 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFD---VECEMMKSIRH 228
D F + ++GRGGFG V+ ++ G A K N + + KG+ VE +++ +
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMI---DVASALEY 285
R ++ + + LV+ M G + ++Y+ + FQ + + S LE+
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAP 344
LH II+ DLKP NVLLDD+ +SD +A L T+T+ A T G+MAP
Sbjct: 305 LH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA---GQTKTKGYAGTPGFMAP 358
Query: 345 E--YGREGRVSTNGDVYSFGIMLMETFTGKKP 374
E G E S D ++ G+ L E + P
Sbjct: 359 ELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 18/212 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFD---VECEMMKSIRH 228
D F + ++GRGGFG V+ ++ G A K N + + KG+ VE +++ +
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMI---DVASALEY 285
R ++ + + LV+ M G + ++Y+ + FQ + + S LE+
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAP 344
LH II+ DLKP NVLLDD+ +SD +A L T+T+ A T G+MAP
Sbjct: 305 LH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA---GQTKTKGYAGTPGFMAP 358
Query: 345 E--YGREGRVSTNGDVYSFGIMLMETFTGKKP 374
E G E S D ++ G+ L E + P
Sbjct: 359 ELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 24/215 (11%)
Query: 171 ATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRALKGFDV-ECEMMKSIRH 228
++ F + +G G + +VYK G+ VA+K L + E +MK ++H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNY----------ILDIFQRLNIMID 278
N++++ E LV E+M L+KYM S ++ FQ
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFM-DNDLKKYMDSRTVGNTPRGLELNLVKYFQ------- 114
Query: 279 VASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLAT 338
L+ L F + I+H DLKP N+L++ L DF +A+ + + + T
Sbjct: 115 -WQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTF--SSEVVT 171
Query: 339 IGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGK 372
+ Y AP+ R ST+ D++S G +L E TGK
Sbjct: 172 LWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 29/229 (12%)
Query: 174 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIK 233
+++ +IG G FG VY+A+L D E+ LQ R + E ++M+ + H N+++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---NRELQIMRKLDHCNIVR 77
Query: 234 V--ISTCSNEE----FKALVLEYMP---HGSLEKYMYSSNYILDIFQRLNIMIDVASALE 284
+ S E+ + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 285 YLH-FGYSAPIIHCDLKPSNVLLD-DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
Y+H FG I H D+KP N+LLD D V L DF AK L + +++ + + Y
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYR 189
Query: 343 APE--YGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWV 389
APE +G S+ DV+S G +L E G+ IF G+ + V
Sbjct: 190 APELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGDSGVDQLV 233
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 13/219 (5%)
Query: 163 FSHLELC-RATDGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQ--CGRALKGFDV 218
F + C R TD + +G+G F V + + E A K+ N + R + +
Sbjct: 20 FQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLER 79
Query: 219 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMID 278
E + + ++H N++++ + S E F LV + + G L + + + Y + +
Sbjct: 80 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY----YSEADASHC 135
Query: 279 VASALEYLHFGYSAPIIHCDLKPSNVLLDDN---MVAHLSDFSIAKLLTGEDQSMTQTQT 335
+ LE ++ + I+H DLKP N+LL L+DF +A + GE Q+
Sbjct: 136 IHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFA- 194
Query: 336 LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
T GY++PE R+ D+++ G++L G P
Sbjct: 195 -GTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 115/285 (40%), Gaps = 40/285 (14%)
Query: 181 IGRGGFGSVYKARLG------DGMEVAVKVFNLQCGRALK-GFDVECEMMKSIRHRNLIK 233
+G G FG VY+ ++ ++VAVK C + F +E ++ H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMY------SSNYILDIFQRLNIMIDVASALEYLH 287
I + +++E M G L+ ++ S L + L++ D+A +YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 288 FGYSAPIIHCDLKPSNVLLD---DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
+ IH D+ N LL VA + DF +A+ + + + +M P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGA 403
E EG ++ D +SFG++L E F+ G P N E+ +E V +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV--------------LEFVTS 275
Query: 404 NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
+ C V+ + +C PE R N I+ ++
Sbjct: 276 GG------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 116/278 (41%), Gaps = 33/278 (11%)
Query: 181 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCGRALKGFDVECEMMKSIRHRNLIKVI 235
IG G FG V Y + + VA+K N + F E M+ H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 236 STCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPII 295
+ E +++E G L ++ Y LD+ + +++AL YL S +
Sbjct: 78 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 296 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ-TQTLATIGYMAPEYGREGRVST 354
H D+ NVL+ N L DF +++ + ED + + ++ I +MAPE R ++
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 355 NGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHF 413
DV+ FG+ + E G KP + N ++ + + LP+
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP---------------- 235
Query: 414 VAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKI 451
C +++L +C P +R E+ A+L I
Sbjct: 236 ----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 101/230 (43%), Gaps = 22/230 (9%)
Query: 150 NDANMPSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKARLGDG-MEVAVKV-FNL 207
N + P I T R F+ D F +G+G FG+VY AR VA+KV F
Sbjct: 8 NSSGTPDILT-RHFT-------IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKS 59
Query: 208 QCGR--ALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNY 265
Q + E E+ + H N++++ + + L+LEY P G L K + S
Sbjct: 60 QIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSC- 118
Query: 266 ILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 325
D + IM ++A AL Y H +IH D+KP N+LL ++DF +
Sbjct: 119 TFDEQRTATIMEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFG----WSV 171
Query: 326 EDQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 374
S+ + T+ Y+ PE EGR+ D++ G++ E G P
Sbjct: 172 HAPSLRRKTMCGTLDYLPPEMI-EGRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 28/214 (13%)
Query: 175 FSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIK 233
FS + +IGRGGFG VY R D G A+K + + + +G + ++ R ++
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL------ALNERIMLS 243
Query: 234 VIST-------CSNEEFK-----ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVAS 281
++ST C + F + +L+ M G L ++ + R ++
Sbjct: 244 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIIL 302
Query: 282 ALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGY 341
LE++H + +++ DLKP+N+LLD++ +SD +A + + ++ T GY
Sbjct: 303 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHGY 355
Query: 342 MAPEYGREG-RVSTNGDVYSFGIMLMETFTGKKP 374
MAPE ++G ++ D +S G ML + G P
Sbjct: 356 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 116/278 (41%), Gaps = 33/278 (11%)
Query: 181 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCGRALKGFDVECEMMKSIRHRNLIKVI 235
IG G FG V Y + + VA+K N + F E M+ H +++K+I
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 236 STCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPII 295
+ E +++E G L ++ Y LD+ + +++AL YL S +
Sbjct: 83 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 138
Query: 296 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ-TQTLATIGYMAPEYGREGRVST 354
H D+ NVL+ N L DF +++ + ED + + ++ I +MAPE R ++
Sbjct: 139 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 196
Query: 355 NGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHF 413
DV+ FG+ + E G KP + N ++ + + LP+
Sbjct: 197 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP---------------- 240
Query: 414 VAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKI 451
C +++L +C P +R E+ A+L I
Sbjct: 241 ----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 116/278 (41%), Gaps = 33/278 (11%)
Query: 181 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCGRALKGFDVECEMMKSIRHRNLIKVI 235
IG G FG V Y + + VA+K N + F E M+ H +++K+I
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 236 STCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPII 295
+ E +++E G L ++ Y LD+ + +++AL YL S +
Sbjct: 106 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 161
Query: 296 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ-TQTLATIGYMAPEYGREGRVST 354
H D+ NVL+ N L DF +++ + ED + + ++ I +MAPE R ++
Sbjct: 162 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 219
Query: 355 NGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHF 413
DV+ FG+ + E G KP + N ++ + + LP+
Sbjct: 220 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP---------------- 263
Query: 414 VAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKI 451
C +++L +C P +R E+ A+L I
Sbjct: 264 ----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 297
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 28/214 (13%)
Query: 175 FSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIK 233
FS + +IGRGGFG VY R D G A+K + + + +G + ++ R ++
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL------ALNERIMLS 244
Query: 234 VIST-------CSNEEFK-----ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVAS 281
++ST C + F + +L+ M G L ++ + R ++
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIIL 303
Query: 282 ALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGY 341
LE++H + +++ DLKP+N+LLD++ +SD +A + + ++ T GY
Sbjct: 304 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHGY 356
Query: 342 MAPEYGREG-RVSTNGDVYSFGIMLMETFTGKKP 374
MAPE ++G ++ D +S G ML + G P
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 116/278 (41%), Gaps = 33/278 (11%)
Query: 181 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCGRALKGFDVECEMMKSIRHRNLIKVI 235
IG G FG V Y + + VA+K N + F E M+ H +++K+I
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 236 STCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPII 295
+ E +++E G L ++ Y LD+ + +++AL YL S +
Sbjct: 75 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 130
Query: 296 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ-TQTLATIGYMAPEYGREGRVST 354
H D+ NVL+ N L DF +++ + ED + + ++ I +MAPE R ++
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 188
Query: 355 NGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHF 413
DV+ FG+ + E G KP + N ++ + + LP+
Sbjct: 189 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP---------------- 232
Query: 414 VAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKI 451
C +++L +C P +R E+ A+L I
Sbjct: 233 ----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 266
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 116/278 (41%), Gaps = 33/278 (11%)
Query: 181 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCGRALKGFDVECEMMKSIRHRNLIKVI 235
IG G FG V Y + + VA+K N + F E M+ H +++K+I
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 236 STCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPII 295
+ E +++E G L ++ Y LD+ + +++AL YL S +
Sbjct: 81 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 136
Query: 296 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ-TQTLATIGYMAPEYGREGRVST 354
H D+ NVL+ N L DF +++ + ED + + ++ I +MAPE R ++
Sbjct: 137 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 194
Query: 355 NGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHF 413
DV+ FG+ + E G KP + N ++ + + LP+
Sbjct: 195 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP---------------- 238
Query: 414 VAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKI 451
C +++L +C P +R E+ A+L I
Sbjct: 239 ----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 272
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 116/278 (41%), Gaps = 33/278 (11%)
Query: 181 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCGRALKGFDVECEMMKSIRHRNLIKVI 235
IG G FG V Y + + VA+K N + F E M+ H +++K+I
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 236 STCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPII 295
+ E +++E G L ++ Y LD+ + +++AL YL S +
Sbjct: 80 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 135
Query: 296 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ-TQTLATIGYMAPEYGREGRVST 354
H D+ NVL+ N L DF +++ + ED + + ++ I +MAPE R ++
Sbjct: 136 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 193
Query: 355 NGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHF 413
DV+ FG+ + E G KP + N ++ + + LP+
Sbjct: 194 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP---------------- 237
Query: 414 VAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKI 451
C +++L +C P +R E+ A+L I
Sbjct: 238 ----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 271
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 104/214 (48%), Gaps = 25/214 (11%)
Query: 182 GRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVIST---C 238
RG FG V+KA+L + VAVK+F LQ ++ + + E ++H NL++ I+
Sbjct: 24 ARGRFGCVWKAQLMNDF-VAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAEKRG 81
Query: 239 SNEEFK-ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF--------G 289
SN E + L+ + GSL Y+ + I+ + ++ ++ L YLH G
Sbjct: 82 SNLEVELWLITAFHDKGSLTDYLKGN--IITWNELCHVAETMSRGLSYLHEDVPWCRGEG 139
Query: 290 YSAPIIHCDLKPSNVLLDDNMVAHLSDFSIA-KLLTGEDQSMTQTQTLATIGYMAPEYGR 348
+ I H D K NVLL ++ A L+DF +A + G+ T Q + T YMAPE
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQ-VGTRRYMAPEV-L 197
Query: 349 EGRVSTNG------DVYSFGIMLMETFTGKKPTN 376
EG ++ D+Y+ G++L E + K +
Sbjct: 198 EGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 102/217 (47%), Gaps = 17/217 (7%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVFNLQCGRALKGFDVECEMMK 224
L++ + F + ++G+G FG V+ A + A+K L+ L DVEC M++
Sbjct: 10 LQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVE 67
Query: 225 ------SIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMID 278
+ H L + T +E V+EY+ G L Y S + D+ + +
Sbjct: 68 KRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL-MYHIQSCHKFDLSRATFYAAE 126
Query: 279 VASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKL-LTGEDQSMTQTQTLA 337
+ L++LH S I++ DLK N+LLD + ++DF + K + G+ ++
Sbjct: 127 IILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT---NXFCG 180
Query: 338 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
T Y+APE + + + D +SFG++L E G+ P
Sbjct: 181 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 96/209 (45%), Gaps = 12/209 (5%)
Query: 172 TDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRH 228
TD + +G+G F V + ++ G E A K+ N + R + + E + + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
N++++ + S E F LV + + G L + + + Y + + + LE ++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY----YSEADASHCIQQILESVNH 118
Query: 289 GYSAPIIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
+ I+H DLKP N+LL L+DF +A + G+ Q+ T GY++PE
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPE 176
Query: 346 YGREGRVSTNGDVYSFGIMLMETFTGKKP 374
R+ D+++ G++L G P
Sbjct: 177 VLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 116/278 (41%), Gaps = 33/278 (11%)
Query: 181 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCGRALKGFDVECEMMKSIRHRNLIKVI 235
IG G FG V Y + M VA+K N + F E M+ H +++K+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 236 STCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPII 295
+ E +++E G L ++ + LD+ + +++AL YL S +
Sbjct: 458 GVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 513
Query: 296 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ-TQTLATIGYMAPEYGREGRVST 354
H D+ NVL+ N L DF +++ + ED + + ++ I +MAPE R ++
Sbjct: 514 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 571
Query: 355 NGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHF 413
DV+ FG+ + E G KP + N ++ + + LP+
Sbjct: 572 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP---------------- 615
Query: 414 VAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKI 451
C +++L +C P +R E+ A+L I
Sbjct: 616 ----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 103/235 (43%), Gaps = 24/235 (10%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMK------S 225
D F ++G+G FG V AR+ + G AVKV L+ L+ DVEC M + +
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKV--LKKDVILQDDDVECTMTEKRILSLA 80
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
H L ++ + V+E++ G L ++ S + R ++ SAL +
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF-YAAEIISALMF 139
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
LH II+ DLK NVLLD L+DF + K G +T T Y+APE
Sbjct: 140 LH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDYIAPE 194
Query: 346 YGREGRVSTNGDVYSFGIMLMETFTGKKP---TNE------IFNGEMTLKHWVND 391
+E D ++ G++L E G P NE I N E+ W+++
Sbjct: 195 ILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHE 249
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 24/204 (11%)
Query: 182 GRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVIST---- 237
RG FG V+KA+L + VAVK+F +Q ++ + + E + ++H N+++ I
Sbjct: 33 ARGRFGCVWKAQLLNEY-VAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGAEKRG 90
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF-------GY 290
S + L+ + GSL ++ ++ ++ + +I +A L YLH G+
Sbjct: 91 TSVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGH 148
Query: 291 SAPIIHCDLKPSNVLLDDNMVAHLSDFSIA-KLLTGEDQSMTQTQTLATIGYMAPEYGRE 349
I H D+K NVLL +N+ A ++DF +A K G+ T Q + T YMAPE E
Sbjct: 149 KPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQ-VGTRRYMAPEV-LE 206
Query: 350 GRVSTNG------DVYSFGIMLME 367
G ++ D+Y+ G++L E
Sbjct: 207 GAINFQRDAFLRIDMYAMGLVLWE 230
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 17/208 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMMKS 225
+ F + IG G +G VYKAR G VA+K L A++ E ++K
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKE 57
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
+ H N++K++ E LV E++ H L+K+M +S L I + L+
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQG 114
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
L F +S ++H DLKP N+L++ L+DF +A+ + T + T+ Y APE
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPE 172
Query: 346 YGREGR-VSTNGDVYSFGIMLMETFTGK 372
+ ST D++S G + E T +
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMM 223
+ + F + IG G +G VYKAR G VA+K L A++ E ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLL 56
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
K + H N++K++ E LV E++ H L+K+M +S L I + L
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLL 113
Query: 284 EYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
+ L F +S ++H DLKP N+L++ L+DF +A+ + T + T+ Y A
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRA 171
Query: 344 PEYGREGR-VSTNGDVYSFGIMLMETFTGK 372
PE + ST D++S G + E T +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMM 223
+ + F + IG G +G VYKAR G VA+K L A++ E ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLL 58
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
K + H N++K++ E LV E++ H L+K+M +S L I + L
Sbjct: 59 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLL 115
Query: 284 EYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
+ L F +S ++H DLKP N+L++ L+DF +A+ + T + T+ Y A
Sbjct: 116 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRA 173
Query: 344 PEYGREGR-VSTNGDVYSFGIMLMETFTGK 372
PE + ST D++S G + E T +
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMM 223
+ + F + IG G +G VYKAR G VA+K L A++ E ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLL 56
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
K + H N++K++ E LV E++ H L+K+M +S L I + L
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLL 113
Query: 284 EYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
+ L F +S ++H DLKP N+L++ L+DF +A+ + T + T+ Y A
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRA 171
Query: 344 PEYGREGR-VSTNGDVYSFGIMLMETFTGK 372
PE + ST D++S G + E T +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 132/308 (42%), Gaps = 54/308 (17%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSI--RHRNLIKVIS-- 236
+G+G +G V++ L G VAVK+F+ R + + E E+ ++ RH N++ I+
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFS---SRDEQSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 237 -TCSNEEFK-ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLH---FGYS 291
T N + L+ Y HGSL Y + L+ L + + A L +LH FG
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSL--YDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQ 129
Query: 292 A--PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT-GEDQ-SMTQTQTLATIGYMAPEYG 347
I H D K NVL+ N+ ++D +A + + G D + + T YMAPE
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVL 189
Query: 348 REGRVSTN-------GDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEV 400
E ++ T+ D+++FG++L E I NG V D+ P
Sbjct: 190 DE-QIRTDCFESYKWTDIWAFGLVLWEI-----ARRTIVNGI------VEDYRP--PFYD 235
Query: 401 VGANLLSQEDIHFV--------------AKEQCVSCVFNLAMECTVESPEQRINAREIVA 446
V N S ED+ V A + +S + + EC +P R+ A I
Sbjct: 236 VVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKK 295
Query: 447 KLLKIRDS 454
L KI +S
Sbjct: 296 TLQKISNS 303
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 181 IGRGGFGSV----YKARLGDGMEVAVKVFNLQCGRA-LKGFDVECEMMKSIRHRNLIKVI 235
+G G FGSV Y+ R ++VA+KV +A + E ++M + + ++++I
Sbjct: 344 LGCGNFGSVRQGVYRMR-KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 236 STCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPII 295
C E LV+E G L K++ + + ++ V+ ++YL +
Sbjct: 403 GVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFV 458
Query: 296 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT-QTQTLATIGYMAPEYGREGRVST 354
H +L NVLL + A +SDF ++K L +D T ++ + + APE + S+
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 518
Query: 355 NGDVYSFGIMLMETFT-GKKPTNEIFNGEM 383
DV+S+G+ + E + G+KP ++ E+
Sbjct: 519 RSDVWSYGVTMWEALSYGQKPYKKMKGPEV 548
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 181 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVIST 237
IG+G F V AR + G EVA+K+ + +L+ E +MK + H N++K+
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
E+ L++EY G + Y+ + + + R + SA++Y H I+H
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCH---QKRIVHR 135
Query: 298 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-TNG 356
DLK N+LLD +M ++DF + T + T + Y APE + +
Sbjct: 136 DLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT---FCGSPPYAAPELFQGKKYDGPEV 192
Query: 357 DVYSFGIMLMETFTGKKPTNEIFNGE 382
DV+S G++L +G P F+G+
Sbjct: 193 DVWSLGVILYTLVSGSLP----FDGQ 214
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMM 223
+ + F + IG G +G VYKAR G VA+K L A++ E ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLL 59
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
K + H N++K++ E LV E++ H L+K+M +S L I + L
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLL 116
Query: 284 EYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
+ L F +S ++H DLKP N+L++ L+DF +A+ + T + T+ Y A
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRA 174
Query: 344 PEYGREGR-VSTNGDVYSFGIMLMETFTGK 372
PE + ST D++S G + E T +
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMM 223
+ + F + IG G +G VYKAR G VA+K L A++ E ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLL 58
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
K + H N++K++ E LV E++ H L+K+M +S L I + L
Sbjct: 59 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLL 115
Query: 284 EYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
+ L F +S ++H DLKP N+L++ L+DF +A+ + T + T+ Y A
Sbjct: 116 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRA 173
Query: 344 PEYGREGR-VSTNGDVYSFGIMLMETFTGK 372
PE + ST D++S G + E T +
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 175 FSENNL-----IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIR- 227
F NNL +G G FG V +A G G E AV ++ ++ D + +M ++
Sbjct: 35 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 94
Query: 228 ------HRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMY---------SSNYILDIFQR 272
H N++ ++ C++ ++ EY +G L ++ L++
Sbjct: 95 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 154
Query: 273 LNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 332
L+ VA + +L S IH D+ NVLL + VA + DF +A+ + + + +
Sbjct: 155 LHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 211
Query: 333 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 370
+ +MAPE + + DV+S+GI+L E F+
Sbjct: 212 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 96/209 (45%), Gaps = 12/209 (5%)
Query: 172 TDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRH 228
TD + +G+G F V + ++ G E A K+ N + R + + E + + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
N++++ + S E F LV + + G L + + + Y + + + LE ++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY----YSEADASHCIQQILESVNH 118
Query: 289 GYSAPIIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
+ I+H DLKP N+LL L+DF +A + G+ Q+ T GY++PE
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPE 176
Query: 346 YGREGRVSTNGDVYSFGIMLMETFTGKKP 374
R+ D+++ G++L G P
Sbjct: 177 VLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMM 223
+ + F + IG G +G VYKAR G VA+K L A++ E ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLL 56
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
K + H N++K++ E LV E++ H L+K+M +S L I + L
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLL 113
Query: 284 EYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
+ L F +S ++H DLKP N+L++ L+DF +A+ + T + T+ Y A
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRA 171
Query: 344 PEYGREGR-VSTNGDVYSFGIMLMETFTGK 372
PE + ST D++S G + E T +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMM 223
+ + F + IG G +G VYKAR G VA+K L A++ E ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLL 58
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
K + H N++K++ E LV E++ H L+K+M +S L I + L
Sbjct: 59 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLL 115
Query: 284 EYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
+ L F +S ++H DLKP N+L++ L+DF +A+ + T + T+ Y A
Sbjct: 116 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRA 173
Query: 344 PEYGREGR-VSTNGDVYSFGIMLMETFTGK 372
PE + ST D++S G + E T +
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMM 223
+ + F + IG G +G VYKAR G VA+K L A++ E ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLL 57
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
K + H N++K++ E LV E++ H L+K+M +S L I + L
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLL 114
Query: 284 EYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
+ L F +S ++H DLKP N+L++ L+DF +A+ + T + T+ Y A
Sbjct: 115 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRA 172
Query: 344 PEYGREGR-VSTNGDVYSFGIMLMETFTGK 372
PE + ST D++S G + E T +
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 17/208 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMMKS 225
+ F + IG G +G VYKAR G VA+K L A++ E ++K
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKE 57
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
+ H N++K++ E LV E++ H L+K+M +S L I + L+
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQG 114
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
L F +S ++H DLKP N+L++ L+DF +A+ + T + T+ Y APE
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPE 172
Query: 346 YGREGR-VSTNGDVYSFGIMLMETFTGK 372
+ ST D++S G + E T +
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMM 223
+ + F + IG G +G VYKAR G VA+K L A++ E ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLL 59
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
K + H N++K++ E LV E++ H L+K+M +S L I + L
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLL 116
Query: 284 EYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
+ L F +S ++H DLKP N+L++ L+DF +A+ + T + T+ Y A
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRA 174
Query: 344 PEYGREGR-VSTNGDVYSFGIMLMETFTGK 372
PE + ST D++S G + E T +
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMM 223
+ + F + IG G +G VYKAR G VA+K L A++ E ++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLL 60
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
K + H N++K++ E LV E++ H L+K+M +S L I + L
Sbjct: 61 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLL 117
Query: 284 EYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
+ L F +S ++H DLKP N+L++ L+DF +A+ + T + T+ Y A
Sbjct: 118 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRA 175
Query: 344 PEYGREGR-VSTNGDVYSFGIMLMETFTGK 372
PE + ST D++S G + E T +
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMM 223
+ + F + IG G +G VYKAR G VA+K L A++ E ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLL 57
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
K + H N++K++ E LV E++ H L+K+M +S L I + L
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLL 114
Query: 284 EYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
+ L F +S ++H DLKP N+L++ L+DF +A+ + T + T+ Y A
Sbjct: 115 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRA 172
Query: 344 PEYGREGR-VSTNGDVYSFGIMLMETFTGK 372
PE + ST D++S G + E T +
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 17/208 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMMKS 225
+ F + IG G +G VYKAR G VA+K L A++ E ++K
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKE 59
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
+ H N++K++ E LV E++ H L+K+M +S L I + L+
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQG 116
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
L F +S ++H DLKP N+L++ L+DF +A+ + T + T+ Y APE
Sbjct: 117 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAPE 174
Query: 346 YGREGR-VSTNGDVYSFGIMLMETFTGK 372
+ ST D++S G + E T +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 129/311 (41%), Gaps = 66/311 (21%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSI--RHRNLIKVISTC 238
+G+G +G V++ G VAVK+F+ R K + E E+ ++ RH N++ I++
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 100
Query: 239 SNEEFKA----LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLH---FGYS 291
+ L+ Y GSL Y+ + LD L I++ +AS L +LH FG
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQ 158
Query: 292 A--PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT-----LATIGYMAP 344
I H DLK N+L+ N ++D +A + QS Q + T YMAP
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM---HSQSTNQLDVGNNPRVGTKRYMAP 215
Query: 345 E----------YGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLP 394
E + RV D+++FG++L E + +N I V D+ P
Sbjct: 216 EVLDETIQVDCFDSYKRV----DIWAFGLVLWEV-ARRMVSNGI----------VEDYKP 260
Query: 395 ISTMEVVGANLLSQEDIHFVA--------------KEQCVSCVFNLAMECTVESPEQRIN 440
V N S ED+ V + ++ + L EC ++P R+
Sbjct: 261 --PFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT 318
Query: 441 AREIVAKLLKI 451
A I L KI
Sbjct: 319 ALRIKKTLTKI 329
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 179 NLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGR--ALKGFDVECEMMKSIRHRNLIKVIS 236
LIG+G FG VY R EVA+++ +++ LK F E + RH N++ +
Sbjct: 39 ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 237 TCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIH 296
C + A++ +L + + +LD+ + I ++ + YLH + I+H
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILH 153
Query: 297 CDLKPSNVLLDDNMVAHLSD---FSIAKLLTG---EDQSMTQTQTLATIGYMAPEYGREG 350
DLK NV D+ V ++D FSI+ +L ED+ Q L ++APE R+
Sbjct: 154 KDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQNGWLC---HLAPEIIRQL 209
Query: 351 R---------VSTNGDVYSFGIMLMETFTGKKP 374
S + DV++ G + E + P
Sbjct: 210 SPDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 175 FSENNLIGRGGFGSVYKARLG-DGMEVA---VKVFNLQCGRALK---------------- 214
F E LIG GGFG V+KA+ DG VK N + R +K
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGC 73
Query: 215 --GFDVECEM----MKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSN-YIL 267
GFD + E ++S + S+ S + + +E+ G+LE+++ L
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 133
Query: 268 DIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327
D L + + ++Y+H S +IH DLKPSN+ L D + DF + L +
Sbjct: 134 DKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG 190
Query: 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLME 367
+ +T++ T+ YM+PE D+Y+ G++L E
Sbjct: 191 K---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAE 227
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 16/218 (7%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQ-CGRALKGFDVECEMMKSIRHRN 230
D + +IG G V A E VA+K NL+ C ++ E + M H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 231 LIKVISTCSNEEFKALVLEYMPHGS---LEKYMYSSNY----ILDIFQRLNIMIDVASAL 283
++ ++ ++ LV++ + GS + K++ + +LD I+ +V L
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 284 EYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL-TGEDQSMTQTQT--LATIG 340
EYLH IH D+K N+LL ++ ++DF ++ L TG D + + + + T
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 341 YMAPEYGREGR-VSTNGDVYSFGIMLMETFTGKKPTNE 377
+MAPE + R D++SFGI +E TG P ++
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 224
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMM 223
+ + F + IG G +G VYKAR G VA+K L A++ E ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLL 56
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
K + H N++K++ E LV E++ H L+K+M +S L I + L
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLL 113
Query: 284 EYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
+ L F +S ++H DLKP N+L++ L+DF +A+ + T + T+ Y A
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRA 171
Query: 344 PEYGREGR-VSTNGDVYSFGIMLMETFTGK 372
PE + ST D++S G + E T +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 180 LIGR-GGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+IG G FG VYKA+ + + A KV + + L+ + VE +++ S H N++K++
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
E +++E+ G+++ M L Q + AL YLH IIH
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHR 132
Query: 298 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT--LATIGYMAPEY-----GREG 350
DLK N+L + L+DF ++ T ++ Q + + T +MAPE ++
Sbjct: 133 DLKAGNILFTLDGDIKLADFGVSAKNT---RTXIQRRDSFIGTPYWMAPEVVMCETSKDR 189
Query: 351 RVSTNGDVYSFGIMLMETFTGKKPTNEI 378
DV+S GI L+E + P +E+
Sbjct: 190 PYDYKADVWSLGITLIEMAEIEPPHHEL 217
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 18/231 (7%)
Query: 155 PSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKA-RLGDG----MEVAVKVFNLQC 209
P+ A R EL + ++G G FG+VYK + DG + VA+KV
Sbjct: 6 PNQALLRILKETELRKV-------KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT 58
Query: 210 G-RALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILD 268
+A K E +M + + +++ C + LV + MP+G L ++ + L
Sbjct: 59 SPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLG 117
Query: 269 IFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 328
LN + +A + YL ++H DL NVL+ ++DF +A+LL ++
Sbjct: 118 SQDLLNWCMQIAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET 174
Query: 329 SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEI 378
I +MA E R + DV+S+G+ + E T G KP + I
Sbjct: 175 EYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGI 225
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 175 FSENNL-----IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIR- 227
F NNL +G G FG V +A G G E AV ++ ++ D + +M ++
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 228 ------HRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMY---------SSNYILDIFQR 272
H N++ ++ C++ ++ EY +G L ++ L++
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 162
Query: 273 LNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 332
L+ VA + +L S IH D+ NVLL + VA + DF +A+ + + + +
Sbjct: 163 LHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 219
Query: 333 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 370
+ +MAPE + + DV+S+GI+L E F+
Sbjct: 220 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 21/210 (10%)
Query: 187 GSVYKARLGDGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRHRNLIKVISTCSNE--E 242
G ++K R G ++ VKV ++ R + F+ EC ++ H N++ V+ C +
Sbjct: 24 GELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 243 FKALVLEYMPHGSLEKYMYS-SNYILDIFQRLNIMIDVASALEYLHFGYSAPII--HCDL 299
L+ + P+GSL ++ +N+++D Q + +D A +LH P+I H L
Sbjct: 83 HPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLH--TLEPLIPRHA-L 139
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTN---G 356
+V +D++ A +S + S ++APE ++ TN
Sbjct: 140 NSRSVXIDEDXTARISXADVK-------FSFQSPGRXYAPAWVAPEALQKKPEDTNRRSA 192
Query: 357 DVYSFGIMLMETFTGKKPTNEIFNGEMTLK 386
D +SF ++L E T + P ++ N E+ K
Sbjct: 193 DXWSFAVLLWELVTREVPFADLSNXEIGXK 222
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 129/311 (41%), Gaps = 66/311 (21%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSI--RHRNLIKVISTC 238
+G+G +G V++ G VAVK+F+ R K + E E+ ++ RH N++ I++
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 239 SNEEFKA----LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLH---FGYS 291
+ L+ Y GSL Y+ + LD L I++ +AS L +LH FG
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 292 A--PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT-----LATIGYMAP 344
I H DLK N+L+ N ++D +A + QS Q + T YMAP
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM---HSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 345 E----------YGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLP 394
E + RV D+++FG++L E + +N I V D+ P
Sbjct: 187 EVLDETIQVDCFDSYKRV----DIWAFGLVLWEV-ARRMVSNGI----------VEDYKP 231
Query: 395 ISTMEVVGANLLSQEDIHFVA--------------KEQCVSCVFNLAMECTVESPEQRIN 440
V N S ED+ V + ++ + L EC ++P R+
Sbjct: 232 --PFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT 289
Query: 441 AREIVAKLLKI 451
A I L KI
Sbjct: 290 ALRIKKTLTKI 300
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 129/311 (41%), Gaps = 66/311 (21%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSI--RHRNLIKVISTC 238
+G+G +G V++ G VAVK+F+ R K + E E+ ++ RH N++ I++
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 239 SNEEFKA----LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLH---FGYS 291
+ L+ Y GSL Y+ + LD L I++ +AS L +LH FG
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 292 A--PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT-----LATIGYMAP 344
I H DLK N+L+ N ++D +A + QS Q + T YMAP
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM---HSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 345 E----------YGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLP 394
E + RV D+++FG++L E + +N I V D+ P
Sbjct: 187 EVLDETIQVDCFDSYKRV----DIWAFGLVLWEV-ARRMVSNGI----------VEDYKP 231
Query: 395 ISTMEVVGANLLSQEDIHFVA--------------KEQCVSCVFNLAMECTVESPEQRIN 440
V N S ED+ V + ++ + L EC ++P R+
Sbjct: 232 --PFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT 289
Query: 441 AREIVAKLLKI 451
A I L KI
Sbjct: 290 ALRIKKTLTKI 300
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 16/215 (7%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQ-CGRALKGFDVECEMMKSIRHRN 230
D + +IG G V A E VA+K NL+ C ++ E + M H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 231 LIKVISTCSNEEFKALVLEYMPHGS---LEKYMYSSNY----ILDIFQRLNIMIDVASAL 283
++ ++ ++ LV++ + GS + K++ + +LD I+ +V L
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 284 EYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL-TGEDQSMTQTQT--LATIG 340
EYLH IH D+K N+LL ++ ++DF ++ L TG D + + + + T
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 341 YMAPEYGREGR-VSTNGDVYSFGIMLMETFTGKKP 374
+MAPE + R D++SFGI +E TG P
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 95/226 (42%), Gaps = 31/226 (13%)
Query: 169 CRATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIR 227
R F E ++G+G FG V KAR D A+K L E ++ S+
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLN 60
Query: 228 H-------------RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLN 274
H RN +K ++ + + +EY +G+L ++S N +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR 120
Query: 275 IMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAK-------LLTGED 327
+ + AL Y+H S IIH DLKP N+ +D++ + DF +AK +L +
Sbjct: 121 LFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 328 QSM-----TQTQTLATIGYMAPEY-GREGRVSTNGDVYSFGIMLME 367
Q++ T + T Y+A E G + D+YS GI+ E
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE 223
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 17/208 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMMKS 225
+ F + IG G +G VYKAR G VA+K L A++ E ++K
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKE 57
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
+ H N++K++ E LV E++ H L+ +M +S L I + L+
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASA--LTGIPLPLIKSYLFQLLQG 114
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
L F +S ++H DLKP N+L++ L+DF +A+ + T T + T+ Y APE
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPE 172
Query: 346 YGREGR-VSTNGDVYSFGIMLMETFTGK 372
+ ST D++S G + E T +
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 21/209 (10%)
Query: 181 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVIST 237
IG+G F V AR + G EVA+K+ + +L+ E +MK + H N++K+
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
E+ L++EY G + Y+ + + + R + SA++Y H I+H
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCH---QKRIVHR 138
Query: 298 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIG---YMAPEYGREGRVS- 353
DLK N+LLD +M ++DF + T + A G Y APE + +
Sbjct: 139 DLKAENLLLDADMNIKIADFGFSNEFT------VGGKLDAFCGAPPYAAPELFQGKKYDG 192
Query: 354 TNGDVYSFGIMLMETFTGKKPTNEIFNGE 382
DV+S G++L +G P F+G+
Sbjct: 193 PEVDVWSLGVILYTLVSGSLP----FDGQ 217
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 104/222 (46%), Gaps = 31/222 (13%)
Query: 164 SHLELCRATDGFSENNLIGRGGFGSVYKARL----GDGMEVAVKVFNLQCGRALKGFD-- 217
SH EL + ++G+G FG V+ R G A+KV LK D
Sbjct: 28 SHFELLK---------VLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKAT---LKVRDRV 75
Query: 218 ---VECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLN 274
+E +++ + H ++K+ E L+L+++ G L + S ++ + +
Sbjct: 76 RTKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVK 133
Query: 275 I-MIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 333
+ ++A L++LH S II+ DLKP N+LLD+ L+DF ++K D
Sbjct: 134 FYLAELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--EAIDHEKKAY 188
Query: 334 QTLATIGYMAPE-YGREGRVSTNGDVYSFGIMLMETFTGKKP 374
T+ YMAPE R+G S + D +S+G+++ E TG P
Sbjct: 189 SFCGTVEYMAPEVVNRQGH-SHSADWWSYGVLMFEMLTGSLP 229
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 179 NLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGR--ALKGFD-----VECEMMKSIRHRNL 231
++G+G FG V+ + G + A +++ ++ + LK D +E +++ + H +
Sbjct: 30 KVLGQGSFGKVFLVKKISGSD-ARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFI 88
Query: 232 IKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNI-MIDVASALEYLHFGY 290
+K+ E L+L+++ G L + S ++ + + + ++A AL++LH
Sbjct: 89 VKLHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALALDHLH--- 143
Query: 291 SAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG 350
S II+ DLKP N+LLD+ L+DF ++K D T+ YMAPE
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 351 RVSTNGDVYSFGIMLMETFTGKKP 374
+ + D +SFG+++ E TG P
Sbjct: 202 GHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 179 NLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGR--ALKGFD-----VECEMMKSIRHRNL 231
++G+G FG V+ + G + A +++ ++ + LK D +E +++ + H +
Sbjct: 31 KVLGQGSFGKVFLVKKISGSD-ARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFI 89
Query: 232 IKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNI-MIDVASALEYLHFGY 290
+K+ E L+L+++ G L + S ++ + + + ++A AL++LH
Sbjct: 90 VKLHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALALDHLH--- 144
Query: 291 SAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG 350
S II+ DLKP N+LLD+ L+DF ++K D T+ YMAPE
Sbjct: 145 SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRR 202
Query: 351 RVSTNGDVYSFGIMLMETFTGKKP 374
+ + D +SFG+++ E TG P
Sbjct: 203 GHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 9/202 (4%)
Query: 176 SENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKV 234
S+ ++G G FG V+K G+++A K+ + + + E +M + H NLI++
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPI 294
++ LV+EY+ G L + +Y L + M + + ++H Y I
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY---I 208
Query: 295 IHCDLKPSNVLL--DDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV 352
+H DLKP N+L D + DF +A+ ++ T ++APE V
Sbjct: 209 LHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV---NFGTPEFLAPEVVNYDFV 265
Query: 353 STNGDVYSFGIMLMETFTGKKP 374
S D++S G++ +G P
Sbjct: 266 SFPTDMWSVGVIAYMLLSGLSP 287
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 115/285 (40%), Gaps = 40/285 (14%)
Query: 181 IGRGGFGSVYKARLG------DGMEVAVKVF-NLQCGRALKGFDVECEMMKSIRHRNLIK 233
+G G FG VY+ ++ ++VAVK + + F +E ++ H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMY------SSNYILDIFQRLNIMIDVASALEYLH 287
I + ++LE M G L+ ++ S L + L++ D+A +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 288 FGYSAPIIHCDLKPSNVLLD---DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
+ IH D+ N LL VA + DF +A+ + + + +M P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGA 403
E EG ++ D +SFG++L E F+ G P N E+ +E V +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV--------------LEFVTS 275
Query: 404 NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
+ C V+ + +C PE R N I+ ++
Sbjct: 276 GG------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 179 NLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGR--ALKGFD-----VECEMMKSIRHRNL 231
++G+G FG V+ + G + A +++ ++ + LK D +E +++ + H +
Sbjct: 30 KVLGQGSFGKVFLVKKISGSD-ARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFI 88
Query: 232 IKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNI-MIDVASALEYLHFGY 290
+K+ E L+L+++ G L + S ++ + + + ++A AL++LH
Sbjct: 89 VKLHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALALDHLH--- 143
Query: 291 SAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG 350
S II+ DLKP N+LLD+ L+DF ++K D T+ YMAPE
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 351 RVSTNGDVYSFGIMLMETFTGKKP 374
+ + D +SFG+++ E TG P
Sbjct: 202 GHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 33/210 (15%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSI--RHRNLIKVISTC 238
IG+G FG V++ + G EVAVK+F+ R + + E E+ +++ RH N++ I+
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 239 SNEEFKA----LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGY---- 290
+ + LV +Y HGSL Y+ + Y + + + + + AS L +LH
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 127
Query: 291 -SAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA------TIGYMA 343
I H DLK N+L+ N ++D +A S T T +A T YMA
Sbjct: 128 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAV----RHDSATDTIDIAPNHRVGTKRYMA 183
Query: 344 PEY------GREGRVSTNGDVYSFGIMLME 367
PE + D+Y+ G++ E
Sbjct: 184 PEVLDDSINMKHFESFKRADIYAMGLVFWE 213
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 25/206 (12%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSI--RHRNLIKVISTC 238
IG+G FG V++ + G EVAVK+F+ R + + E E+ +++ RH N++ I+
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 239 SNEEFKA----LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGY---- 290
+ + LV +Y HGSL Y+ + Y + + + + + AS L +LH
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 125
Query: 291 -SAPIIHCDLKPSNVLLDDNMVAHLSDFSIA-KLLTGEDQ-SMTQTQTLATIGYMAPEY- 346
I H DLK N+L+ N ++D +A + + D + + T YMAPE
Sbjct: 126 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 185
Query: 347 -----GREGRVSTNGDVYSFGIMLME 367
+ D+Y+ G++ E
Sbjct: 186 DDSINMKHFESFKRADIYAMGLVFWE 211
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 13/223 (5%)
Query: 160 WRTFSHLELCRATDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDV 218
W+ + + T F + ++G+GGFG V ++ G A K + + KG +
Sbjct: 173 WKWLERQPVTKNT--FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAM 230
Query: 219 ---ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLN 274
E ++++ + R ++ + ++ LVL M G L+ ++Y + +
Sbjct: 231 ALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF 290
Query: 275 IMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 334
++ LE LH I++ DLKP N+LLDD+ +SD +A + + T
Sbjct: 291 YAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVP---EGQTIKG 344
Query: 335 TLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNE 377
+ T+GYMAPE + R + + D ++ G +L E G+ P +
Sbjct: 345 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 13/220 (5%)
Query: 160 WRTFSHLELCRATDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDV 218
W+ + + T F + ++G+GGFG V ++ G A K + + KG +
Sbjct: 173 WKWLERQPVTKNT--FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAM 230
Query: 219 ---ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYI-LDIFQRLN 274
E ++++ + R ++ + ++ LVL M G L+ ++Y + +
Sbjct: 231 ALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF 290
Query: 275 IMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 334
++ LE LH I++ DLKP N+LLDD+ +SD +A + + T
Sbjct: 291 YAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVP---EGQTIKG 344
Query: 335 TLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
+ T+GYMAPE + R + + D ++ G +L E G+ P
Sbjct: 345 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 25/206 (12%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSI--RHRNLIKVISTC 238
IG+G FG V++ + G EVAVK+F+ R + + E E+ +++ RH N++ I+
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 239 SNEEFKA----LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGY---- 290
+ + LV +Y HGSL Y+ + Y + + + + + AS L +LH
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 124
Query: 291 -SAPIIHCDLKPSNVLLDDNMVAHLSDFSIA-KLLTGEDQ-SMTQTQTLATIGYMAPEY- 346
I H DLK N+L+ N ++D +A + + D + + T YMAPE
Sbjct: 125 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 184
Query: 347 -----GREGRVSTNGDVYSFGIMLME 367
+ D+Y+ G++ E
Sbjct: 185 DDSINMKHFESFKRADIYAMGLVFWE 210
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 33/210 (15%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSI--RHRNLIKVISTC 238
IG+G FG V++ + G EVAVK+F+ R + + E E+ +++ RH N++ I+
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 92
Query: 239 SNEEFKA----LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGY---- 290
+ + LV +Y HGSL Y+ + Y + + + + + AS L +LH
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 150
Query: 291 -SAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA------TIGYMA 343
I H DLK N+L+ N ++D +A S T T +A T YMA
Sbjct: 151 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAV----RHDSATDTIDIAPNHRVGTKRYMA 206
Query: 344 PEY------GREGRVSTNGDVYSFGIMLME 367
PE + D+Y+ G++ E
Sbjct: 207 PEVLDDSINMKHFESFKRADIYAMGLVFWE 236
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 21/208 (10%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRALKGFDV------ECEMMKSIRHRNLIK 233
+G G FG V A +VA+K + Q LK D+ E +K +RH ++IK
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQL---LKKSDMHMRVEREISYLKLLRHPHIIK 73
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAP 293
+ + +V+EY G L Y+ + + R + A+EY H
Sbjct: 74 LYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGR-RFFQQIICAIEYCH---RHK 128
Query: 294 IIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS 353
I+H DLKP N+LLDDN+ ++DF ++ ++T D + +T + + Y APE G++
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAPEVI-NGKLY 184
Query: 354 TNG--DVYSFGIMLMETFTGKKPTNEIF 379
DV+S GI+L G+ P ++ F
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGRLPFDDEF 212
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 33/210 (15%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSI--RHRNLIKVISTC 238
IG+G FG V++ + G EVAVK+F+ R + + E E+ +++ RH N++ I+
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 239 SNEEFKA----LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGY---- 290
+ + LV +Y HGSL Y+ + Y + + + + + AS L +LH
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 130
Query: 291 -SAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA------TIGYMA 343
I H DLK N+L+ N ++D +A S T T +A T YMA
Sbjct: 131 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAV----RHDSATDTIDIAPNHRVGTKRYMA 186
Query: 344 PEY------GREGRVSTNGDVYSFGIMLME 367
PE + D+Y+ G++ E
Sbjct: 187 PEVLDDSINMKHFESFKRADIYAMGLVFWE 216
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 33/210 (15%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSI--RHRNLIKVISTC 238
IG+G FG V++ + G EVAVK+F+ R + + E E+ +++ RH N++ I+
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 105
Query: 239 SNEEFKA----LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGY---- 290
+ + LV +Y HGSL Y+ + Y + + + + + AS L +LH
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 163
Query: 291 -SAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA------TIGYMA 343
I H DLK N+L+ N ++D +A S T T +A T YMA
Sbjct: 164 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAV----RHDSATDTIDIAPNHRVGTKRYMA 219
Query: 344 PEY------GREGRVSTNGDVYSFGIMLME 367
PE + D+Y+ G++ E
Sbjct: 220 PEVLDDSINMKHFESFKRADIYAMGLVFWE 249
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 115/278 (41%), Gaps = 33/278 (11%)
Query: 181 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCGRALKGFDVECEMMKSIRHRNLIKVI 235
IG G FG V Y + M VA+K N + F E M+ H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 236 STCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPII 295
+ E +++E G L ++ + LD+ + +++AL YL S +
Sbjct: 78 GVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 296 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ-TQTLATIGYMAPEYGREGRVST 354
H D+ NVL+ L DF +++ + ED + + ++ I +MAPE R ++
Sbjct: 134 HRDIAARNVLVSATDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 355 NGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHF 413
DV+ FG+ + E G KP + N ++ + + LP+
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP---------------- 235
Query: 414 VAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKI 451
C +++L +C P +R E+ A+L I
Sbjct: 236 ----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 28/211 (13%)
Query: 175 FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIK 233
F E LIG GGFG V+KA+ DG +K +A + E + + + H N++
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA----EREVKALAKLDHVNIVH 68
Query: 234 V--------------ISTCSNEEFKALV--LEYMPHGSLEKYMYSSN-YILDIFQRLNIM 276
S + K L +E+ G+LE+++ LD L +
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELF 128
Query: 277 IDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 336
+ ++Y+H S +I+ DLKPSN+ L D + DF + L + + + ++
Sbjct: 129 EQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK---RXRSK 182
Query: 337 ATIGYMAPEYGREGRVSTNGDVYSFGIMLME 367
T+ YM+PE D+Y+ G++L E
Sbjct: 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAE 213
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 171 ATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDVEC-------EM 222
AT + IG G +G+VYKAR G VA+K + G +G +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGE--EGLPISTVREVALLRR 59
Query: 223 MKSIRHRNLIKVISTC----SNEEFK-ALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIM 276
+++ H N+++++ C ++ E K LV E++ L Y+ + L ++M
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLM 118
Query: 277 IDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 336
L++LH I+H DLKP N+L+ L+DF +A++ + + M +
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALAPVV 172
Query: 337 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGK 372
T+ Y APE + +T D++S G + E F K
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 25/211 (11%)
Query: 175 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNL---QCGRALKGFDVECEMMKSIRHRN 230
FS+ IG G FG+VY AR + + VA+K + Q + E ++ +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVAS----ALEYL 286
I+ E LV+EY + S++ +L++ ++ +++A+ AL+ L
Sbjct: 77 TIQYRGCYLREHTAWLVMEYC--------LGSASDLLEVHKKPLQEVEIAAVTHGALQGL 128
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
+ +S +IH D+K N+LL + + L DF A ++ + T +MAPE
Sbjct: 129 AYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA------PANXFVGTPYWMAPEV 182
Query: 347 ---GREGRVSTNGDVYSFGIMLMETFTGKKP 374
EG+ DV+S GI +E K P
Sbjct: 183 ILAMDEGQYDGKVDVWSLGITCIELAERKPP 213
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 17/210 (8%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMM 223
+ + F + IG G +G VYKAR G VA+K L A++ E ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLL 56
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
K + H N++K++ E LV E++ H L+ +M +S L I + L
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASA--LTGIPLPLIKSYLFQLL 113
Query: 284 EYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
+ L F +S ++H DLKP N+L++ L+DF +A+ + T + T+ Y A
Sbjct: 114 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRA 171
Query: 344 PEYGREGR-VSTNGDVYSFGIMLMETFTGK 372
PE + ST D++S G + E T +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 28/217 (12%)
Query: 175 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNL---QCGRALKGFDVECEMMKSIRHRN 230
FS+ IG G FG+VY AR + + VA+K + Q + E ++ +RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVAS----ALEYL 286
I+ E LV+EY + S++ +L++ ++ +++A+ AL+ L
Sbjct: 116 TIQYRGCYLREHTAWLVMEYC--------LGSASDLLEVHKKPLQEVEIAAVTHGALQGL 167
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
+ +S +IH D+K N+LL + + L DF A ++ + T +MAPE
Sbjct: 168 AYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA------PANXFVGTPYWMAPEV 221
Query: 347 ---GREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFN 380
EG+ DV+S GI +E K P +FN
Sbjct: 222 ILAMDEGQYDGKVDVWSLGITCIELAERKPP---LFN 255
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 113/277 (40%), Gaps = 20/277 (7%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVF---NLQCGRALKGFDVECEMMKSIRH 228
D F +G+G FG+VY AR + A+KV L+ E E+ +RH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
N++++ + + + L+LE+ P G L K + D + M ++A AL Y H
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCH- 132
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
+IH D+KP N+L+ ++DF + S+ + T+ Y+ PE
Sbjct: 133 --ERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIE 186
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ 408
D++ G++ E G P + + E + I +++ LS
Sbjct: 187 GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRR--------IVNVDLKFPPFLSD 238
Query: 409 EDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIV 445
++K L ++ +E P + N+R ++
Sbjct: 239 GSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVL 275
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 113/277 (40%), Gaps = 20/277 (7%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVF---NLQCGRALKGFDVECEMMKSIRH 228
D F +G+G FG+VY AR + A+KV L+ E E+ +RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
N++++ + + + L+LE+ P G L K + D + M ++A AL Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCH- 131
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
+IH D+KP N+L+ ++DF + S+ + T+ Y+ PE
Sbjct: 132 --ERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIE 185
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ 408
D++ G++ E G P + + E + I +++ LS
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRR--------IVNVDLKFPPFLSD 237
Query: 409 EDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIV 445
++K L ++ +E P + N+R ++
Sbjct: 238 GSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVL 274
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 17/210 (8%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMM 223
+ + F + IG G +G VYKAR G VA+K L A++ E ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLL 59
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
K + H N++K++ E LV E++ H L+ +M +S L I + L
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASA--LTGIPLPLIKSYLFQLL 116
Query: 284 EYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
+ L F +S ++H DLKP N+L++ L+DF +A+ + T + T+ Y A
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRA 174
Query: 344 PEYGREGR-VSTNGDVYSFGIMLMETFTGK 372
PE + ST D++S G + E T +
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 115/278 (41%), Gaps = 33/278 (11%)
Query: 181 IGRGGFGSV----YKARLGDGMEVAVKVF-NLQCGRALKGFDVECEMMKSIRHRNLIKVI 235
IG G FG V Y + M VA+K N + F E M+ H +++K+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 236 STCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPII 295
+ E +++E G L ++ + LD+ + +++AL YL S +
Sbjct: 458 GVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 513
Query: 296 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ-TQTLATIGYMAPEYGREGRVST 354
H D+ NVL+ L DF +++ + ED + + ++ I +MAPE R ++
Sbjct: 514 HRDIAARNVLVSATDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 571
Query: 355 NGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHF 413
DV+ FG+ + E G KP + N ++ + + LP+
Sbjct: 572 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP---------------- 615
Query: 414 VAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKI 451
C +++L +C P +R E+ A+L I
Sbjct: 616 ----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 101/221 (45%), Gaps = 25/221 (11%)
Query: 175 FSENNL-----IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIR- 227
F NNL +G G FG V +A G G E AV ++ ++ D + +M ++
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 228 ------HRNLIKVISTCSNEEFKALVLEYMPHGSLEKYM---------YSSNYILDIFQR 272
H N++ ++ C++ ++ EY +G L ++ YS N + ++
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQ 162
Query: 273 L---NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 329
L +++ + + + F S IH D+ NVLL + VA + DF +A+ + +
Sbjct: 163 LSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 222
Query: 330 MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 370
+ + + +MAPE + + DV+S+GI+L E F+
Sbjct: 223 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 94/209 (44%), Gaps = 13/209 (6%)
Query: 172 TDGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRH 228
+D + +G+G F V + G+E A K+ N + R + + E + + ++H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
N++++ + E F LV + + G L + + + + + + + LE + +
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQQILESIAY 119
Query: 289 GYSAPIIHCDLKPSNVLLDDN---MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
+S I+H +LKP N+LL L+DF +A + + S T GY++PE
Sbjct: 120 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV---NDSEAWHGFAGTPGYLSPE 176
Query: 346 YGREGRVSTNGDVYSFGIMLMETFTGKKP 374
++ S D+++ G++L G P
Sbjct: 177 VLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 180 LIGRGGFGSVYKARLGDGMEV-AVKV---FNLQCGRALKGFDVECEMMKSIRHRNLIKVI 235
+IGRG FG V R +V A+K+ F + F E ++M ++++
Sbjct: 82 VIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 141
Query: 236 STCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPII 295
++++ +V+EYMP G L M SNY + +V AL+ +H S +I
Sbjct: 142 CAFQDDKYLYMVMEYMPGGDLVNLM--SNYDVPEKWAKFYTAEVVLALDAIH---SMGLI 196
Query: 296 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEY----GREG 350
H D+KP N+LLD + L+DF + ++ M T + T Y++PE G +G
Sbjct: 197 HRDVKPDNMLLDKHGHLKLADFGTC--MKMDETGMVHCDTAVGTPDYISPEVLKSQGGDG 254
Query: 351 RVSTNGDVYSFGIMLMETFTGKKP 374
D +S G+ L E G P
Sbjct: 255 YYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 94/209 (44%), Gaps = 13/209 (6%)
Query: 172 TDGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRH 228
+D + +G+G F V + G+E A K+ N + R + + E + + ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
N++++ + E F LV + + G L + + + + + + + LE + +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQQILESIAY 120
Query: 289 GYSAPIIHCDLKPSNVLLDDN---MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
+S I+H +LKP N+LL L+DF +A + + S T GY++PE
Sbjct: 121 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV---NDSEAWHGFAGTPGYLSPE 177
Query: 346 YGREGRVSTNGDVYSFGIMLMETFTGKKP 374
++ S D+++ G++L G P
Sbjct: 178 VLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 94/209 (44%), Gaps = 13/209 (6%)
Query: 172 TDGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRH 228
+D + +G+G F V + G+E A K+ N + R + + E + + ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
N++++ + E F LV + + G L + + + + + + + LE + +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQQILESIAY 120
Query: 289 GYSAPIIHCDLKPSNVLLDDN---MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
+S I+H +LKP N+LL L+DF +A + + S T GY++PE
Sbjct: 121 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV---NDSEAWHGFAGTPGYLSPE 177
Query: 346 YGREGRVSTNGDVYSFGIMLMETFTGKKP 374
++ S D+++ G++L G P
Sbjct: 178 VLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 171 ATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDVEC-------EM 222
AT + IG G +G+VYKAR G VA+K + G +G +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGE--EGLPISTVREVALLRR 59
Query: 223 MKSIRHRNLIKVISTC----SNEEFK-ALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIM 276
+++ H N+++++ C ++ E K LV E++ L Y+ + L ++M
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLM 118
Query: 277 IDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 336
L++LH I+H DLKP N+L+ L+DF +A++ + + M +
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALDPVV 172
Query: 337 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGK 372
T+ Y APE + +T D++S G + E F K
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 18/208 (8%)
Query: 179 NLIGRGGFGSVYKARLGDG--------MEVAVKVFNLQCGRALKGFDVECEMMKSIRHRN 230
++G G +G V+ R G M+V K +Q + + E ++++ IR
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 231 LIKVISTCSNEEFK-ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMI-DVASALEYLHF 288
+ + E K L+L+Y+ G L ++ + + I + ++ ALE+LH
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTE--HEVQIYVGEIVLALEHLH- 176
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
II+ D+K N+LLD N L+DF ++K D++ TI YMAP+ R
Sbjct: 177 --KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA-DETERAYDFCGTIEYMAPDIVR 233
Query: 349 EGRVSTNG--DVYSFGIMLMETFTGKKP 374
G + D +S G+++ E TG P
Sbjct: 234 GGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 171 ATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDVEC-------EM 222
AT + IG G +G+VYKAR G VA+K + G +G +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGE--EGLPISTVREVALLRR 59
Query: 223 MKSIRHRNLIKVISTC----SNEEFK-ALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNIM 276
+++ H N+++++ C ++ E K LV E++ L Y+ + L ++M
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLM 118
Query: 277 IDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 336
L++LH I+H DLKP N+L+ L+DF +A++ + + M +
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALFPVV 172
Query: 337 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGK 372
T+ Y APE + +T D++S G + E F K
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 113/277 (40%), Gaps = 20/277 (7%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVF---NLQCGRALKGFDVECEMMKSIRH 228
D F +G+G FG+VY AR + A+KV L+ E E+ +RH
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
N++++ + + + L+LE+ P G L K + D + M ++A AL Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCH- 131
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
+IH D+KP N+L+ ++DF + S+ + T+ Y+ PE
Sbjct: 132 --ERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIE 185
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ 408
D++ G++ E G P + + E + I +++ LS
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRR--------IVNVDLKFPPFLSD 237
Query: 409 EDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIV 445
++K L ++ +E P + N+R ++
Sbjct: 238 GSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVL 274
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 134/303 (44%), Gaps = 46/303 (15%)
Query: 175 FSENNLIGRGGFGSVYKARLG-DGMEVAVK---VFNLQ--CGRALKGFDVECEMMKSIRH 228
+++ IG G +G V A VA+K F Q C R L+ E +++ RH
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLR----EIQILLRFRH 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLN-----IMIDVASAL 283
N+I + +A+ Y+ +E +Y +L Q N + + L
Sbjct: 101 ENVIGIRDILRASTLEAMRDVYIVQDLMETDLYK---LLKSQQLSNDHICYFLYQILRGL 157
Query: 284 EYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQTQTLATIGYM 342
+Y+H SA ++H DLKPSN+L++ + DF +A++ E D + T+ +AT Y
Sbjct: 158 KYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYR 214
Query: 343 APEYGREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVV 401
APE + T D++S G +L E + + IF G KH+++ I + ++
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQLNHI--LGIL 264
Query: 402 GANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRNVGD 461
G+ SQED+ +C+ N+ ++S + AKL DS ++ D
Sbjct: 265 GSP--SQEDL---------NCIINMKARNYLQSLPSKTKV--AWAKLFPKSDSKALDLLD 311
Query: 462 RCI 464
R +
Sbjct: 312 RML 314
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 92/210 (43%), Gaps = 13/210 (6%)
Query: 180 LIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEM------MKSIRHRNLIK 233
+IG+G FG V AR EV V LQ LK + + M +K+++H L+
Sbjct: 45 VIGKGSFGKVLLAR-HKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAP 293
+ + + VL+Y+ G L ++ L+ R ++ASAL YLH S
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLH---SLN 159
Query: 294 IIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS 353
I++ DLKP N+LLD L+DF + K + + T + T Y+APE +
Sbjct: 160 IVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGTPEYLAPEVLHKQPYD 217
Query: 354 TNGDVYSFGIMLMETFTGKKPTNEIFNGEM 383
D + G +L E G P EM
Sbjct: 218 RTVDWWCLGAVLYEMLYGLPPFYSRNTAEM 247
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 180 LIGRGGFGSVYKARLGDGMEV-AVKV---FNLQCGRALKGFDVECEMMKSIRHRNLIKVI 235
+IGRG FG V R +V A+K+ F + F E ++M ++++
Sbjct: 76 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 135
Query: 236 STCSNEEFKALVLEYMPHGSLEKYMYSSNY-ILDIFQRLNIMIDVASALEYLHFGYSAPI 294
++ + +V+EYMP G L M SNY + + + R +V AL+ +H S
Sbjct: 136 YAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARF-YTAEVVLALDAIH---SMGF 189
Query: 295 IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE----YGREG 350
IH D+KP N+LLD + L+DF + E T + T Y++PE G +G
Sbjct: 190 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDG 248
Query: 351 RVSTNGDVYSFGIMLMETFTGKKP 374
D +S G+ L E G P
Sbjct: 249 YYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 101/233 (43%), Gaps = 44/233 (18%)
Query: 171 ATDGFSEN----NLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRALKGFDV------- 218
+T GF EN ++GRG V + E AVK+ ++ G + +V
Sbjct: 11 STHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70
Query: 219 --ECEMMKSIR-HRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQR--L 273
E ++++ + H N+I++ T F LV + M G L Y+ + + R +
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 274 NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 333
+++V AL L+ I+H DLKP N+LLDD+M L+DF + L D
Sbjct: 131 RALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL---DPGEKLR 181
Query: 334 QTLATIGYMAPE------------YGREGRVSTNGDVYSFGIMLMETFTGKKP 374
+ T Y+APE YG+E D++S G+++ G P
Sbjct: 182 EVCGTPSYLAPEIIECSMNDNHPGYGKE------VDMWSTGVIMYTLLAGSPP 228
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 180 LIGRGGFGSVYKARLGDGMEV-AVKV---FNLQCGRALKGFDVECEMMKSIRHRNLIKVI 235
+IGRG FG V R +V A+K+ F + F E ++M ++++
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 236 STCSNEEFKALVLEYMPHGSLEKYMYSSNY-ILDIFQRLNIMIDVASALEYLHFGYSAPI 294
++ + +V+EYMP G L M SNY + + + R +V AL+ +H S
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARF-YTAEVVLALDAIH---SMGF 194
Query: 295 IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE----YGREG 350
IH D+KP N+LLD + L+DF + E T + T Y++PE G +G
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDG 253
Query: 351 RVSTNGDVYSFGIMLMETFTGKKP 374
D +S G+ L E G P
Sbjct: 254 YYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 94/209 (44%), Gaps = 13/209 (6%)
Query: 172 TDGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRH 228
+D + +G+G F V + G+E A K+ N + R + + E + + ++H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
N++++ + E F LV + + G L + + + + + + + LE + +
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQQILESIAY 143
Query: 289 GYSAPIIHCDLKPSNVLLDDN---MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
+S I+H +LKP N+LL L+DF +A + + S T GY++PE
Sbjct: 144 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV---NDSEAWHGFAGTPGYLSPE 200
Query: 346 YGREGRVSTNGDVYSFGIMLMETFTGKKP 374
++ S D+++ G++L G P
Sbjct: 201 VLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 180 LIGRGGFGSVYKARLGDGMEV-AVKV---FNLQCGRALKGFDVECEMMKSIRHRNLIKVI 235
+IGRG FG V R +V A+K+ F + F E ++M ++++
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 236 STCSNEEFKALVLEYMPHGSLEKYMYSSNY-ILDIFQRLNIMIDVASALEYLHFGYSAPI 294
++ + +V+EYMP G L M SNY + + + R +V AL+ +H S
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARF-YTAEVVLALDAIH---SMGF 194
Query: 295 IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE----YGREG 350
IH D+KP N+LLD + L+DF + E T + T Y++PE G +G
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDG 253
Query: 351 RVSTNGDVYSFGIMLMETFTGKKP 374
D +S G+ L E G P
Sbjct: 254 YYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 95/195 (48%), Gaps = 8/195 (4%)
Query: 181 IGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
IG G G V AR G +VAVK+ +L+ + + E +M+ +H N++++ +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
E +++E++ G+L + S L+ Q + V AL YLH + +IH D+
Sbjct: 113 VGEELWVLMEFLQGGALTDIV--SQVRLNEEQIATVCEAVLQALAYLH---AQGVIHRDI 167
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVY 359
K ++LL + LSDF ++ + + + T +MAPE +T D++
Sbjct: 168 KSDSILLTLDGRVKLSDFGFCAQISKD--VPKRKXLVGTPYWMAPEVISRSLYATEVDIW 225
Query: 360 SFGIMLMETFTGKKP 374
S GIM++E G+ P
Sbjct: 226 SLGIMVIEMVDGEPP 240
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 18/211 (8%)
Query: 180 LIGRGGFGSVYKARLGDG--------MEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNL 231
++G+GG+G V++ R G M+V K ++ + E +++ ++H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 232 IKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ +I L+LEY+ G L + ++ + +++ AL +LH
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGHLH---Q 139
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR 351
II+ DLKP N++L+ L+DF + K + D ++T T TI YMAPE
Sbjct: 140 KGIIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHT-FCGTIEYMAPEILMRSG 197
Query: 352 VSTNGDVYSFGIMLMETFTGKKPTNEIFNGE 382
+ D +S G ++ + TG P F GE
Sbjct: 198 HNRAVDWWSLGALMYDMLTGAPP----FTGE 224
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 28/268 (10%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
IG G G V A G +VAVK +L+ + + E +M+ H N++ + S+
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
+ +V+E++ G+L + + ++ Q + + V AL YLH + +IH D+
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIATVCLSVLRALSYLH---NQGVIHRDI 167
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVY 359
K ++LL + LSDF ++ E + + T +MAPE T D++
Sbjct: 168 KSDSILLTSDGRIKLSDFGFCAQVSKEVPK--RKXLVGTPYWMAPEVISRLPYGTEVDIW 225
Query: 360 SFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ-EDIHFVAKEQ 418
S GIM++E G+ P FN P+ M + +L + +D+H V+
Sbjct: 226 SLGIMVIEMIDGEPP---YFNEP-----------PLQAMRRIRDSLPPRVKDLHKVSS-- 269
Query: 419 CVSCVFNLAMECTVESPEQRINAREIVA 446
+ +L + V P QR A+E++
Sbjct: 270 VLRGFLDLML---VREPSQRATAQELLG 294
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 31/226 (13%)
Query: 169 CRATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIR 227
R F E ++G+G FG V KAR D A+K L E ++ S+
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLN 60
Query: 228 H-------------RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLN 274
H RN +K ++ + + +EY + +L ++S N +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR 120
Query: 275 IMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAK-------LLTGED 327
+ + AL Y+H S IIH DLKP N+ +D++ + DF +AK +L +
Sbjct: 121 LFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 328 QSM-----TQTQTLATIGYMAPEY-GREGRVSTNGDVYSFGIMLME 367
Q++ T + T Y+A E G + D+YS GI+ E
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE 223
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 17/210 (8%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMM 223
+ + F + IG G +G VYKAR G VA+K L A++ E ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLL 59
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
K + H N++K++ E LV E++ L+K+M +S L I + L
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASA--LTGIPLPLIKSYLFQLL 116
Query: 284 EYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
+ L F +S ++H DLKP N+L++ L+DF +A+ + T + T+ Y A
Sbjct: 117 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRA 174
Query: 344 PEYGREGR-VSTNGDVYSFGIMLMETFTGK 372
PE + ST D++S G + E T +
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 17/210 (8%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMM 223
+ + F + IG G +G VYKAR G VA+K L A++ E ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLL 57
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
K + H N++K++ E LV E++ L+K+M +S L I + L
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASA--LTGIPLPLIKSYLFQLL 114
Query: 284 EYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
+ L F +S ++H DLKP N+L++ L+DF +A+ + T + T+ Y A
Sbjct: 115 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRA 172
Query: 344 PEYGREGR-VSTNGDVYSFGIMLMETFTGK 372
PE + ST D++S G + E T +
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 181 IGRGGFGSVYK-ARLGDGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G+G F V + ++ G E A K+ N + R + + E + + ++H N++++ +
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
S E L+ + + G L + + + Y + + + LE + + ++H
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREY----YSEADASHCIQQILEAVLHCHQMGVVHR 145
Query: 298 DLKPSNVLLDDNM---VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVST 354
DLKP N+LL + L+DF +A + GE Q+ T GY++PE R+
Sbjct: 146 DLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTPGYLSPEVLRKDPYGK 203
Query: 355 NGDVYSFGIMLMETFTGKKP 374
D+++ G++L G P
Sbjct: 204 PVDLWACGVILYILLVGYPP 223
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 22/217 (10%)
Query: 171 ATDGFSENNLIGRGGFGSVYKAR-LGDGMEVA---VKVFNLQCGRALKGFDVECEM---- 222
AT + IG G +G+VYKAR G VA V+V N G E+
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 223 -MKSIRHRNLIKVISTC----SNEEFK-ALVLEYMPHGSLEKYMYSSNYI-LDIFQRLNI 275
+++ H N+++++ C ++ E K LV E++ L Y+ + L ++
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDL 125
Query: 276 MIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT 335
M L++LH I+H DLKP N+L+ L+DF +A++ + + M T
Sbjct: 126 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALTPV 179
Query: 336 LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGK 372
+ T+ Y APE + +T D++S G + E F K
Sbjct: 180 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 100/233 (42%), Gaps = 44/233 (18%)
Query: 171 ATDGFSEN----NLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRALKGFDV------- 218
+T GF EN ++GRG V + E AVK+ ++ G + +V
Sbjct: 11 STHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70
Query: 219 --ECEMMKSIR-HRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQR--L 273
E ++++ + H N+I++ T F LV + M G L Y+ + + R +
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 274 NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 333
+++V AL L+ I+H DLKP N+LLDD+M L+DF + L D
Sbjct: 131 RALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL---DPGEKLR 181
Query: 334 QTLATIGYMAPE------------YGREGRVSTNGDVYSFGIMLMETFTGKKP 374
T Y+APE YG+E D++S G+++ G P
Sbjct: 182 SVCGTPSYLAPEIIECSMNDNHPGYGKE------VDMWSTGVIMYTLLAGSPP 228
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 17/210 (8%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMM 223
+ + F + IG G +G VYKAR G VA+K L A++ E ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLL 59
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
K + H N++K++ E LV E++ L+K+M +S L I + L
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASA--LTGIPLPLIKSYLFQLL 116
Query: 284 EYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
+ L F +S ++H DLKP N+L++ L+DF +A+ + T + T+ Y A
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRA 174
Query: 344 PEYGREGR-VSTNGDVYSFGIMLMETFTGK 372
PE + ST D++S G + E T +
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 126/267 (47%), Gaps = 48/267 (17%)
Query: 175 FSENNLIGRGGFGSVYKARLG-DGMEVAVK---VFNLQ--CGRALKGFDVECEMMKSIRH 228
++ + IG G +G V A + + VA+K F Q C R L+ E +++ RH
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRH 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSN-YILDIFQRLN------IMIDVAS 281
N+I + N+ +A +E M L ++ ++ Y L Q L+ + +
Sbjct: 101 ENIIGI-----NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILR 155
Query: 282 ALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQTQTLATIG 340
L+Y+H SA ++H DLKPSN+LL+ + DF +A++ + D + T+ +AT
Sbjct: 156 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 341 YMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTME 399
Y APE + T D++S G +L E + + IF G KH+++ I +
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQLNHI--LG 262
Query: 400 VVGANLLSQEDIHFVAKEQCVSCVFNL 426
++G+ SQED+ +C+ NL
Sbjct: 263 ILGSP--SQEDL---------NCIINL 278
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F IG G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EYMP G + ++ + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F IG G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EYMP G + ++ + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 15/206 (7%)
Query: 181 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVIST 237
IG+G F V AR + G EVAVK+ + +L+ E + K + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
E+ LV EY G + Y+ + + R + SA++Y H + I+H
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 298 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-TNG 356
DLK N+LLD + ++DF + T ++ Y APE + +
Sbjct: 138 DLKAENLLLDADXNIKIADFGFSNEFTFGNKL---DAFCGAPPYAAPELFQGKKYDGPEV 194
Query: 357 DVYSFGIMLMETFTGKKPTNEIFNGE 382
DV+S G++L +G P F+G+
Sbjct: 195 DVWSLGVILYTLVSGSLP----FDGQ 216
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 97/231 (41%), Gaps = 38/231 (16%)
Query: 175 FSENNL-----IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIR- 227
F NNL +G G FG V +A G G E AV ++ ++ D + +M ++
Sbjct: 28 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 87
Query: 228 ------HRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMY-------------------- 261
H N++ ++ C++ ++ EY +G L ++
Sbjct: 88 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGL 147
Query: 262 --SSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSI 319
L++ L+ VA + +L S IH D+ NVLL + VA + DF +
Sbjct: 148 DKEDGRPLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGL 204
Query: 320 AKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 370
A+ + + + + + +MAPE + + DV+S+GI+L E F+
Sbjct: 205 ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+P G + ++ + R + EYLH
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 144
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL-ATIGYMAPEYG 347
S +I+ DLKP N+L+D ++DF AK + G +T TL T Y+APE
Sbjct: 145 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWTLCGTPEYLAPEII 196
Query: 348 REGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 197 LSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 133/286 (46%), Gaps = 31/286 (10%)
Query: 173 DGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCGRALKGFDV-ECEMMKSIRHRN 230
D F + + +G G G V+K + G+ +A K+ +L+ A++ + E +++
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILD-IFQRLNIMIDVASALEYLHFG 289
++ ++ ++ +E+M GSL++ + + I + I +++I V L YL
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 126
Query: 290 YSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE 349
+ I+H D+KPSN+L++ L DF ++ L E + + T YM+PE +
Sbjct: 127 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE----MANEFVGTRSYMSPERLQG 180
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409
S D++S G+ L+E G+ P + E+ L + VN+ P + + + S E
Sbjct: 181 THYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFEL-LDYIVNEPPP-----KLPSAVFSLE 234
Query: 410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREI-VAKLLKIRDS 454
FV K C +++P +R + +++ V +K D+
Sbjct: 235 FQDFVNK-------------CLIKNPAERADLKQLMVHAFIKRSDA 267
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 25/209 (11%)
Query: 181 IGRGGFGSVYKARLG-DGMEVAVK----VFNL--QCGRALKGFDVECEMMKSIRHRNLIK 233
IG G +G V AR G +VA+K F++ R L+ E +++K +H N+I
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR----ELKILKHFKHDNIIA 117
Query: 234 VIS----TCSNEEFKAL--VLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLH 287
+ T EFK++ VL+ M L + ++SS L + + + L+Y+H
Sbjct: 118 IKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMH 175
Query: 288 FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL--TGEDQSMTQTQTLATIGYMAPE 345
SA +IH DLKPSN+L+++N + DF +A+ L + + T+ +AT Y APE
Sbjct: 176 ---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 232
Query: 346 YGREGRVSTNG-DVYSFGIMLMETFTGKK 373
T D++S G + E ++
Sbjct: 233 LMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 123/261 (47%), Gaps = 48/261 (18%)
Query: 181 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRALKGFDVECEMMKSIRHRNLIKV 234
IG G +G V A + + VA+K F Q C R L+ E +++ + RH N+I +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLAFRHENIIGI 88
Query: 235 ISTCSNEEFKALVLEYMPHGSL-EKYMYSSNYILDIFQRLN------IMIDVASALEYLH 287
N+ +A +E M + + M + Y L Q L+ + + L+Y+H
Sbjct: 89 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 143
Query: 288 FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQTQTLATIGYMAPEY 346
SA ++H DLKPSN+LL+ + DF +A++ + D + T+ +AT Y APE
Sbjct: 144 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405
+ T D++S G +L E + + IF G KH+++ I + ++G+
Sbjct: 201 MLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQLNHI--LGILGSP- 249
Query: 406 LSQEDIHFVAKEQCVSCVFNL 426
SQED+ +C+ NL
Sbjct: 250 -SQEDL---------NCIINL 260
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+P G + ++ + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL-ATIGYMAPEYG 347
S +I+ DLKP N+L+D ++DF AK + G +T TL T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWTLCGTPEYLAPEII 211
Query: 348 REGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 25/209 (11%)
Query: 181 IGRGGFGSVYKARLG-DGMEVAVK----VFNL--QCGRALKGFDVECEMMKSIRHRNLIK 233
IG G +G V AR G +VA+K F++ R L+ E +++K +H N+I
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR----ELKILKHFKHDNIIA 118
Query: 234 VIS----TCSNEEFKAL--VLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLH 287
+ T EFK++ VL+ M L + ++SS L + + + L+Y+H
Sbjct: 119 IKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMH 176
Query: 288 FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL--TGEDQSMTQTQTLATIGYMAPE 345
SA +IH DLKPSN+L+++N + DF +A+ L + + T+ +AT Y APE
Sbjct: 177 ---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 233
Query: 346 YGREGRVSTNG-DVYSFGIMLMETFTGKK 373
T D++S G + E ++
Sbjct: 234 LMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 181 IGRGGFGSVYK-ARLGDGMEVAVK-----VFNLQCGRALKGFDVECEMMKSIRHRNLIKV 234
IGRG +GSV K G +AVK V + + L DV +M+S +++
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDV---VMRSSDCPYIVQF 86
Query: 235 ISTCSNEEFKALVLEYMPHG--SLEKYMYSSNYILD--IFQRLNIMIDVASALEYLHFGY 290
E + +E M KY+YS +LD I + + I +A+ H
Sbjct: 87 YGALFREGDCWICMELMSTSFDKFYKYVYS---VLDDVIPEEILGKITLATVKALNHLKE 143
Query: 291 SAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY---- 346
+ IIH D+KPSN+LLD + L DF I+ L S+ +T+ YMAPE
Sbjct: 144 NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV---DSIAKTRDAGCRPYMAPERIDPS 200
Query: 347 -GREGRVSTNGDVYSFGIMLMETFTGKKPT---NEIFN 380
R+G DV+S GI L E TG+ P N +F+
Sbjct: 201 ASRQG-YDVRSDVWSLGITLYELATGRFPYPKWNSVFD 237
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 99/230 (43%), Gaps = 44/230 (19%)
Query: 174 GFSEN----NLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRALKGFDV---------E 219
GF EN ++GRG V + E AVK+ ++ G + +V E
Sbjct: 1 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKE 60
Query: 220 CEMMKSIR-HRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQR--LNIM 276
++++ + H N+I++ T F LV + M G L Y+ + + R + +
Sbjct: 61 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL 120
Query: 277 IDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 336
++V AL L+ I+H DLKP N+LLDD+M L+DF + L D +
Sbjct: 121 LEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL---DPGEKLREVC 171
Query: 337 ATIGYMAPE------------YGREGRVSTNGDVYSFGIMLMETFTGKKP 374
T Y+APE YG+E D++S G+++ G P
Sbjct: 172 GTPSYLAPEIIECSMNDNHPGYGKE------VDMWSTGVIMYTLLAGSPP 215
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 48/261 (18%)
Query: 181 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRALKGFDVECEMMKSIRHRNLIKV 234
IG G +G V A + + VA+K F Q C R L+ E +++ RH N+I +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 90
Query: 235 ISTCSNEEFKALVLEYMPHGSL-EKYMYSSNYILDIFQRLN------IMIDVASALEYLH 287
N+ +A +E M + + M + Y L Q L+ + + L+Y+H
Sbjct: 91 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 288 FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQTQTLATIGYMAPEY 346
SA ++H DLKPSN+LL+ + DF +A++ + D + T+ +AT Y APE
Sbjct: 146 ---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405
+ T D++S G +L E + + IF G KH+++ I + ++G+
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQLNHI--LGILGSP- 251
Query: 406 LSQEDIHFVAKEQCVSCVFNL 426
SQED+ +C+ NL
Sbjct: 252 -SQEDL---------NCIINL 262
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 105/234 (44%), Gaps = 21/234 (8%)
Query: 175 FSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIK 233
++ N IGRG +G V A + G + A K + F E E+MKS+ H N+I+
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 234 VISTCSNEEFKALVLEYMPHGSL-EKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
+ T + LV+E G L E+ ++ + R IM DV SA+ Y H
Sbjct: 71 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR--IMKDVLSAVAYCH---KL 125
Query: 293 PIIHCDLKPSNVL-LDDNMVAHLS--DFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE 349
+ H DLKP N L L D+ + L DF +A + M +T+ + T Y++P+ E
Sbjct: 126 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF--KPGKMMRTK-VGTPYYVSPQV-LE 181
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLK-------HWVNDWLPIS 396
G D +S G+M+ G P + + E+ LK DWL +S
Sbjct: 182 GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVS 235
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 122/252 (48%), Gaps = 24/252 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQ--CGRALKG-FDVECEMMKSIRHRNLIKVIS 236
+G G FG V A G +VA+K+ N + ++G + E ++ +RH ++IK+
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 237 TCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIH 296
+++ +V+EY + L Y+ + + + R + SA+EY H I+H
Sbjct: 76 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCH---RHKIVH 130
Query: 297 CDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG 356
DLKP N+LLD+++ ++DF ++ ++T D + +T + + Y APE G++
Sbjct: 131 RDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAPEV-ISGKLYAGP 186
Query: 357 --DVYSFGIMLMETFTGKKPTNE---------IFNGEMTLKHWVNDWLPISTMEVVGANL 405
DV+S G++L + P ++ I NG TL +++ ++ N
Sbjct: 187 EVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNP 246
Query: 406 LSQEDIHFVAKE 417
L++ IH + ++
Sbjct: 247 LNRISIHEIMQD 258
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 122/252 (48%), Gaps = 24/252 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQ--CGRALKG-FDVECEMMKSIRHRNLIKVIS 236
+G G FG V A G +VA+K+ N + ++G + E ++ +RH ++IK+
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 237 TCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIH 296
+++ +V+EY + L Y+ + + + R + SA+EY H I+H
Sbjct: 72 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCH---RHKIVH 126
Query: 297 CDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG 356
DLKP N+LLD+++ ++DF ++ ++T D + +T + + Y APE G++
Sbjct: 127 RDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAPEV-ISGKLYAGP 182
Query: 357 --DVYSFGIMLMETFTGKKPTNE---------IFNGEMTLKHWVNDWLPISTMEVVGANL 405
DV+S G++L + P ++ I NG TL +++ ++ N
Sbjct: 183 EVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNP 242
Query: 406 LSQEDIHFVAKE 417
L++ IH + ++
Sbjct: 243 LNRISIHEIMQD 254
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 180 LIGRGGFGSVYKARLGDG--------MEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNL 231
++G+GG+G V++ R G M+V K ++ + E +++ ++H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 232 IKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ +I L+LEY+ G L + ++ + +++ AL +LH
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGHLH---Q 139
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR 351
II+ DLKP N++L+ L+DF + K + D ++T TI YMAPE
Sbjct: 140 KGIIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHX-FCGTIEYMAPEILMRSG 197
Query: 352 VSTNGDVYSFGIMLMETFTGKKPTNEIFNGE 382
+ D +S G ++ + TG P F GE
Sbjct: 198 HNRAVDWWSLGALMYDMLTGAPP----FTGE 224
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 48/261 (18%)
Query: 181 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRALKGFDVECEMMKSIRHRNLIKV 234
IG G +G V A + + VA+K F Q C R L+ E +++ RH N+I +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 86
Query: 235 ISTCSNEEFKALVLEYMPHGSL-EKYMYSSNYILDIFQRLN------IMIDVASALEYLH 287
N+ +A +E M + + M + Y L Q L+ + + L+Y+H
Sbjct: 87 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 288 FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQTQTLATIGYMAPEY 346
SA ++H DLKPSN+LL+ + DF +A++ + D + T+ +AT Y APE
Sbjct: 142 ---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405
+ T D++S G +L E + + IF G KH+++ I + ++G+
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQLNHI--LGILGSP- 247
Query: 406 LSQEDIHFVAKEQCVSCVFNL 426
SQED+ +C+ NL
Sbjct: 248 -SQEDL---------NCIINL 258
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 48/261 (18%)
Query: 181 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRALKGFDVECEMMKSIRHRNLIKV 234
IG G +G V A + + VA+K F Q C R L+ E +++ RH N+I +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 91
Query: 235 ISTCSNEEFKALVLEYMPHGSL-EKYMYSSNYILDIFQRLN------IMIDVASALEYLH 287
N+ +A +E M + + M + Y L Q L+ + + L+Y+H
Sbjct: 92 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 146
Query: 288 FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQTQTLATIGYMAPEY 346
SA ++H DLKPSN+LL+ + DF +A++ + D + T+ +AT Y APE
Sbjct: 147 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 203
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405
+ T D++S G +L E + + IF G KH+++ I + ++G+
Sbjct: 204 MLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQLNHI--LGILGSP- 252
Query: 406 LSQEDIHFVAKEQCVSCVFNL 426
SQED+ +C+ NL
Sbjct: 253 -SQEDL---------NCIINL 263
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 48/261 (18%)
Query: 181 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRALKGFDVECEMMKSIRHRNLIKV 234
IG G +G V A + + VA+K F Q C R L+ E +++ RH N+I +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 92
Query: 235 ISTCSNEEFKALVLEYMPHGSL-EKYMYSSNYILDIFQRLN------IMIDVASALEYLH 287
N+ +A +E M + + M + Y L Q L+ + + L+Y+H
Sbjct: 93 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 147
Query: 288 FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQTQTLATIGYMAPEY 346
SA ++H DLKPSN+LL+ + DF +A++ + D + T+ +AT Y APE
Sbjct: 148 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 204
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405
+ T D++S G +L E + + IF G KH+++ I + ++G+
Sbjct: 205 MLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQLNHI--LGILGSP- 253
Query: 406 LSQEDIHFVAKEQCVSCVFNL 426
SQED+ +C+ NL
Sbjct: 254 -SQEDL---------NCIINL 264
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 48/261 (18%)
Query: 181 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRALKGFDVECEMMKSIRHRNLIKV 234
IG G +G V A + + VA+K F Q C R L+ E +++ RH N+I +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 83
Query: 235 ISTCSNEEFKALVLEYMPHGSL-EKYMYSSNYILDIFQRLN------IMIDVASALEYLH 287
N+ +A +E M + + M + Y L Q L+ + + L+Y+H
Sbjct: 84 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 138
Query: 288 FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQTQTLATIGYMAPEY 346
SA ++H DLKPSN+LL+ + DF +A++ + D + T+ +AT Y APE
Sbjct: 139 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 195
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405
+ T D++S G +L E + + IF G KH+++ I + ++G+
Sbjct: 196 MLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQLNHI--LGILGSP- 244
Query: 406 LSQEDIHFVAKEQCVSCVFNL 426
SQED+ +C+ NL
Sbjct: 245 -SQEDL---------NCIINL 255
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 34/213 (15%)
Query: 180 LIGRGGFGSVY--KARLGDGMEVAVKVFNLQCGRALKGF-----DVECEMMKSIRHRNLI 232
++G G F V+ K RL K+F L+C + F + E ++K I+H N++
Sbjct: 16 VLGSGAFSEVFLVKQRLTG------KLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIV 69
Query: 233 KVISTCSNEEFKALVLEYMPHGSL-----EKYMYSSNYILDIFQRLNIMIDVASALEYLH 287
+ + LV++ + G L E+ +Y+ + Q+ V SA++YLH
Sbjct: 70 TLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ------VLSAVKYLH 123
Query: 288 FGYSAPIIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
I+H DLKP N+L ++N ++DF ++K+ +Q+ + T GY+AP
Sbjct: 124 ---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYVAP 176
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFTGKKPTNE 377
E + S D +S G++ G P E
Sbjct: 177 EVLAQKPYSKAVDCWSIGVITYILLCGYPPFYE 209
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 48/261 (18%)
Query: 181 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRALKGFDVECEMMKSIRHRNLIKV 234
IG G +G V A + + VA+K F Q C R L+ E +++ RH N+I +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 90
Query: 235 ISTCSNEEFKALVLEYMPHGSL-EKYMYSSNYILDIFQRLN------IMIDVASALEYLH 287
N+ +A +E M + + M + Y L Q L+ + + L+Y+H
Sbjct: 91 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 288 FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQTQTLATIGYMAPEY 346
SA ++H DLKPSN+LL+ + DF +A++ + D + T+ +AT Y APE
Sbjct: 146 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405
+ T D++S G +L E + + IF G KH+++ I + ++G+
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQLNHI--LGILGSP- 251
Query: 406 LSQEDIHFVAKEQCVSCVFNL 426
SQED+ +C+ NL
Sbjct: 252 -SQEDL---------NCIINL 262
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 103/203 (50%), Gaps = 15/203 (7%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQ--CGRALKG-FDVECEMMKSIRHRNLIKVIS 236
+G G FG V A G +VA+K+ N + ++G + E ++ +RH ++IK+
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 237 TCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIH 296
+++ +V+EY + L Y+ + + + R + SA+EY H I+H
Sbjct: 81 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCH---RHKIVH 135
Query: 297 CDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG 356
DLKP N+LLD+++ ++DF ++ ++T D + +T + + Y APE G++
Sbjct: 136 RDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAPEV-ISGKLYAGP 191
Query: 357 --DVYSFGIMLMETFTGKKPTNE 377
DV+S G++L + P ++
Sbjct: 192 EVDVWSCGVILYVMLCRRLPFDD 214
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 96/231 (41%), Gaps = 29/231 (12%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKG----FDVECEMMKSIRHRNLIKVI- 235
IGRG F +VYK L V V LQ + K F E E +K ++H N+++
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 236 ---STCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMI------DVASALEYL 286
ST ++ LV E G+L+ Y L F+ I + + L++L
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTY-------LKRFKVXKIKVLRSWCRQILKGLQFL 145
Query: 287 HFGYSAPIIHCDLKPSNVLLDD-NMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
H + PIIH DLK N+ + + D +A L ++ + T + APE
Sbjct: 146 H-TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFXAPE 200
Query: 346 YGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPIS 396
E + + DVY+FG +E T + P +E N + + P S
Sbjct: 201 XYEE-KYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPAS 250
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 48/261 (18%)
Query: 181 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRALKGFDVECEMMKSIRHRNLIKV 234
IG G +G V A + + VA+K F Q C R L+ E +++ RH N+I +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 84
Query: 235 ISTCSNEEFKALVLEYMPHGSL-EKYMYSSNYILDIFQRLN------IMIDVASALEYLH 287
N+ +A +E M + + M + Y L Q L+ + + L+Y+H
Sbjct: 85 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 139
Query: 288 FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQTQTLATIGYMAPEY 346
SA ++H DLKPSN+LL+ + DF +A++ + D + T+ +AT Y APE
Sbjct: 140 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 196
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405
+ T D++S G +L E + + IF G KH+++ I + ++G+
Sbjct: 197 MLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQLNHI--LGILGSP- 245
Query: 406 LSQEDIHFVAKEQCVSCVFNL 426
SQED+ +C+ NL
Sbjct: 246 -SQEDL---------NCIINL 256
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 103/203 (50%), Gaps = 15/203 (7%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFNLQ--CGRALKG-FDVECEMMKSIRHRNLIKVIS 236
+G G FG V A G +VA+K+ N + ++G + E ++ +RH ++IK+
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 237 TCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIH 296
+++ +V+EY + L Y+ + + + R + SA+EY H I+H
Sbjct: 82 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCH---RHKIVH 136
Query: 297 CDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG 356
DLKP N+LLD+++ ++DF ++ ++T D + +T + + Y APE G++
Sbjct: 137 RDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAPEV-ISGKLYAGP 192
Query: 357 --DVYSFGIMLMETFTGKKPTNE 377
DV+S G++L + P ++
Sbjct: 193 EVDVWSCGVILYVMLCRRLPFDD 215
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 105/234 (44%), Gaps = 21/234 (8%)
Query: 175 FSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIK 233
++ N IGRG +G V A + G + A K + F E E+MKS+ H N+I+
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 87
Query: 234 VISTCSNEEFKALVLEYMPHGSL-EKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
+ T + LV+E G L E+ ++ + R IM DV SA+ Y H
Sbjct: 88 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR--IMKDVLSAVAYCH---KL 142
Query: 293 PIIHCDLKPSNVL-LDDNMVAHLS--DFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE 349
+ H DLKP N L L D+ + L DF +A + M +T+ + T Y++P+ E
Sbjct: 143 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF--KPGKMMRTK-VGTPYYVSPQV-LE 198
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLK-------HWVNDWLPIS 396
G D +S G+M+ G P + + E+ LK DWL +S
Sbjct: 199 GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVS 252
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 125/267 (46%), Gaps = 48/267 (17%)
Query: 175 FSENNLIGRGGFGSVYKARLG-DGMEVAVK---VFNLQ--CGRALKGFDVECEMMKSIRH 228
++ + IG G +G V A + + VA+K F Q C R L+ E +++ RH
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRH 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSL-EKYMYSSNYILDIFQRLN------IMIDVAS 281
N+I + N+ +A +E M + + M + Y L Q L+ + +
Sbjct: 101 ENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 155
Query: 282 ALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQTQTLATIG 340
L+Y+H SA ++H DLKPSN+LL+ + DF +A++ + D + T+ +AT
Sbjct: 156 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 341 YMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTME 399
Y APE + T D++S G +L E + + IF G KH+++ I +
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQLNHI--LG 262
Query: 400 VVGANLLSQEDIHFVAKEQCVSCVFNL 426
++G+ SQED+ +C+ NL
Sbjct: 263 ILGSP--SQEDL---------NCIINL 278
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 126/267 (47%), Gaps = 39/267 (14%)
Query: 181 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRALKGFDVECEMMKSIRHRNLIKV 234
IG G +G V A + + VA+K F Q C R L+ E +++ RH N+I +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 86
Query: 235 ISTCSNEEFKALVLEYMPHGSL-EKYMYSSNYILDIFQRLN------IMIDVASALEYLH 287
N+ +A +E M + + M + Y L Q L+ + + L+Y+H
Sbjct: 87 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 288 FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQTQTLATIGYMAPEY 346
SA ++H DLKPSN+LL+ + DF +A++ + D + T+ +AT Y APE
Sbjct: 142 ---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405
+ T D++S G +L E + + IF G KH+++ I + ++G+
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQLNHI--LGILGSP- 247
Query: 406 LSQEDIHFVAKEQCVSCVFNLAMECTV 432
SQED++ + + + + +L + V
Sbjct: 248 -SQEDLNXIINLKARNYLLSLPHKNKV 273
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 48/261 (18%)
Query: 181 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRALKGFDVECEMMKSIRHRNLIKV 234
IG G +G V A + + VA+K F Q C R L+ E +++ RH N+I +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 86
Query: 235 ISTCSNEEFKALVLEYMPHGSL-EKYMYSSNYILDIFQRLN------IMIDVASALEYLH 287
N+ +A +E M + + M + Y L Q L+ + + L+Y+H
Sbjct: 87 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 288 FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQTQTLATIGYMAPEY 346
SA ++H DLKPSN+LL+ + DF +A++ + D + T+ +AT Y APE
Sbjct: 142 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405
+ T D++S G +L E + + IF G KH+++ I + ++G+
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQLNHI--LGILGSP- 247
Query: 406 LSQEDIHFVAKEQCVSCVFNL 426
SQED+ +C+ NL
Sbjct: 248 -SQEDL---------NCIINL 258
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 125/267 (46%), Gaps = 48/267 (17%)
Query: 175 FSENNLIGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRALKGFDVECEMMKSIRH 228
++ + IG G +G V A + + VA+K F Q C R L+ E +++ RH
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRH 84
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSL-EKYMYSSNYILDIFQRLN------IMIDVAS 281
N+I + N+ +A +E M + + M + Y L Q L+ + +
Sbjct: 85 ENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILR 139
Query: 282 ALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQTQTLATIG 340
L+Y+H SA ++H DLKPSN+LL+ + DF +A++ + D + T+ +AT
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 341 YMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTME 399
Y APE + T D++S G +L E + + IF G KH+++ I +
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQLNHI--LG 246
Query: 400 VVGANLLSQEDIHFVAKEQCVSCVFNL 426
++G+ SQED+ +C+ NL
Sbjct: 247 ILGSP--SQEDL---------NCIINL 262
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 48/261 (18%)
Query: 181 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRALKGFDVECEMMKSIRHRNLIKV 234
IG G +G V A + + VA+K F Q C R L+ E +++ RH N+I +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 88
Query: 235 ISTCSNEEFKALVLEYMPHGSL-EKYMYSSNYILDIFQRLN------IMIDVASALEYLH 287
N+ +A +E M + + M + Y L Q L+ + + L+Y+H
Sbjct: 89 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 143
Query: 288 FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQTQTLATIGYMAPEY 346
SA ++H DLKPSN+LL+ + DF +A++ + D + T+ +AT Y APE
Sbjct: 144 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405
+ T D++S G +L E + + IF G KH+++ I + ++G+
Sbjct: 201 MLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQLNHI--LGILGSP- 249
Query: 406 LSQEDIHFVAKEQCVSCVFNL 426
SQED+ +C+ NL
Sbjct: 250 -SQEDL---------NCIINL 260
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 25/212 (11%)
Query: 181 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRA-LKGFDVECEMMKSIRHR-NLI 232
+GRG FG V +A + VAVK+ + + E +++ I H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 233 KVISTCSNEEFKALVL-EYMPHGSLEKYM---------YSSNYILDIFQRLNIMI----D 278
++ C+ +V+ E+ G+L Y+ Y + F L +I
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 279 VASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLAT 338
VA +E+L S IH DL N+LL + V + DF +A+ + + + +
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 339 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 370
+ +MAPE + + DV+SFG++L E F+
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 48/261 (18%)
Query: 181 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRALKGFDVECEMMKSIRHRNLIKV 234
IG G +G V A + + VA+K F Q C R L+ E +++ RH N+I +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 94
Query: 235 ISTCSNEEFKALVLEYMPHGSL-EKYMYSSNYILDIFQRLN------IMIDVASALEYLH 287
N+ +A +E M + + M + Y L Q L+ + + L+Y+H
Sbjct: 95 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 149
Query: 288 FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQTQTLATIGYMAPEY 346
SA ++H DLKPSN+LL+ + DF +A++ + D + T+ +AT Y APE
Sbjct: 150 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 206
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405
+ T D++S G +L E + + IF G KH+++ I + ++G+
Sbjct: 207 MLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQLNHI--LGILGSP- 255
Query: 406 LSQEDIHFVAKEQCVSCVFNL 426
SQED+ +C+ NL
Sbjct: 256 -SQEDL---------NCIINL 266
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 48/261 (18%)
Query: 181 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRALKGFDVECEMMKSIRHRNLIKV 234
IG G +G V A + + VA+K F Q C R L+ E +++ RH N+I +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 86
Query: 235 ISTCSNEEFKALVLEYMPHGSL-EKYMYSSNYILDIFQRLN------IMIDVASALEYLH 287
N+ +A +E M + + M + Y L Q L+ + + L+Y+H
Sbjct: 87 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 288 FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQTQTLATIGYMAPEY 346
SA ++H DLKPSN+LL+ + DF +A++ + D + T+ +AT Y APE
Sbjct: 142 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405
+ T D++S G +L E + + IF G KH+++ I + ++G+
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQLNHI--LGILGSP- 247
Query: 406 LSQEDIHFVAKEQCVSCVFNL 426
SQED+ +C+ NL
Sbjct: 248 -SQEDL---------NCIINL 258
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 17/210 (8%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMM 223
+ + F + IG G +G VYKAR G VA+K L A++ E ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLL 59
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
K + H N++K++ E LV E++ L+ +M +S L I + L
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASA--LTGIPLPLIKSYLFQLL 116
Query: 284 EYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
+ L F +S ++H DLKP N+L++ L+DF +A+ + T + T+ Y A
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRA 174
Query: 344 PEYGREGR-VSTNGDVYSFGIMLMETFTGK 372
PE + ST D++S G + E T +
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 87/178 (48%), Gaps = 14/178 (7%)
Query: 175 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMK-SIRHRNLIK 233
F +++G G G++ + D +VAVK +C D E ++++ S H N+I+
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIR 82
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAP 293
T + +F+ + +E + +L++Y+ ++ + + ++ S L +LH S
Sbjct: 83 YFCTEKDRQFQYIAIE-LCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLN 138
Query: 294 IIHCDLKPSNVLLD-----DNMVAHLSDFSIA-KLLTGEDQSMTQTQTLATIGYMAPE 345
I+H DLKP N+L+ + A +SDF + KL G ++ T G++APE
Sbjct: 139 IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE 196
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 126/267 (47%), Gaps = 39/267 (14%)
Query: 181 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRALKGFDVECEMMKSIRHRNLIKV 234
IG G +G V A + + VA+K F Q C R L+ E +++ RH N+I +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 86
Query: 235 ISTCSNEEFKALVLEYMPHGSL-EKYMYSSNYILDIFQRLN------IMIDVASALEYLH 287
N+ +A +E M + + M + Y L Q L+ + + L+Y+H
Sbjct: 87 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 288 FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQTQTLATIGYMAPEY 346
SA ++H DLKPSN+LL+ + DF +A++ + D + T+ +AT Y APE
Sbjct: 142 ---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405
+ T D++S G +L E + + IF G KH+++ I + ++G+
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQLNHI--LGILGSP- 247
Query: 406 LSQEDIHFVAKEQCVSCVFNLAMECTV 432
SQED++ + + + + +L + V
Sbjct: 248 -SQEDLNXIINLKARNYLLSLPHKNKV 273
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 18/202 (8%)
Query: 181 IGRGGFGSVYKARLGDGME-VAVKVFNLQ------CGRALKGFDVECEMMKSIRHRNLIK 233
IG G +G+V+KA+ + E VA+K L AL+ E ++K ++H+N+++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR----EICLLKELKHKNIVR 65
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAP 293
+ +++ LV E+ L+KY S N LD + + + L + H S
Sbjct: 66 LHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRN 121
Query: 294 IIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV- 352
++H DLKP N+L++ N L+DF +A+ + + + T+ Y P+ ++
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCY--SAEVVTLWYRPPDVLFGAKLY 179
Query: 353 STNGDVYSFGIMLMETFTGKKP 374
ST+ D++S G + E +P
Sbjct: 180 STSIDMWSAGCIFAELANAARP 201
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 127/297 (42%), Gaps = 32/297 (10%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVIS---- 236
IG+G +G V+ + G +VAVKVF A + E +RH N++ I+
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVF-FTTEEASWFRETEIYQTVLMRHENILGFIAADIK 102
Query: 237 -TCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLH---FGYSA 292
T S + L+ +Y +GSL Y+ S+ LD L + S L +LH F
Sbjct: 103 GTGSWTQL-YLITDYHENGSLYDYLKSTT--LDAKSMLKLAYSSVSGLCHLHTEIFSTQG 159
Query: 293 --PIIHCDLKPSNVLLDDNMVAHLSDFSIA-KLLTGEDQ-SMTQTQTLATIGYMAPEYGR 348
I H DLK N+L+ N ++D +A K ++ ++ + + T YM PE
Sbjct: 160 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLD 219
Query: 349 EG------RVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPIS-----T 397
E + D+YSFG++L E ++ + E L + +D +P
Sbjct: 220 ESLNRNHFQSYIMADMYSFGLILWEV--ARRCVSGGIVEEYQLPY--HDLVPSDPSYEDM 275
Query: 398 MEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454
E+V L + + ++C+ + L EC +P R+ A + L K+ +S
Sbjct: 276 REIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+P G + ++ + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 159
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 118/246 (47%), Gaps = 39/246 (15%)
Query: 181 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRALKGFDVECEMMKSIRHRNLIKV 234
IG G +G V A + + VA+K F Q C R L+ E +++ + RH N+I +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLAFRHENIIGI 88
Query: 235 ISTCSNEEFKALVLEYMPHGSL-EKYMYSSNYILDIFQRLN------IMIDVASALEYLH 287
N+ +A +E M + + M + Y L Q L+ + + L+Y+H
Sbjct: 89 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 143
Query: 288 FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQTQTLATIGYMAPEY 346
SA ++H DLKPSN+LL+ + DF +A++ + D + T+ +AT Y APE
Sbjct: 144 ---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405
+ T D++S G +L E + + IF G KH+++ I + ++G+
Sbjct: 201 MLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQLNHI--LGILGSP- 249
Query: 406 LSQEDI 411
SQED+
Sbjct: 250 -SQEDL 254
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+P G + ++ + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 17/210 (8%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC------GRALKGFDVECEMM 223
+ + F + IG G +G VYKAR G VA+K L A++ E ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLL 58
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
K + H N++K++ E LV E++ L+ +M +S L I + L
Sbjct: 59 KELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASA--LTGIPLPLIKSYLFQLL 115
Query: 284 EYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
+ L F +S ++H DLKP N+L++ L+DF +A+ + T + T+ Y A
Sbjct: 116 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRA 173
Query: 344 PEYGREGR-VSTNGDVYSFGIMLMETFTGK 372
PE + ST D++S G + E T +
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 171 ATDGFS---------ENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRALKGFDVEC 220
+TD FS + +++G G V L E AVK+ Q G E
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREV 61
Query: 221 EMMKSIR-HRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
EM+ + HRN++++I E+ LV E M GS+ +++ + ++ + ++ DV
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-VVQDV 120
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDD-NMVA--HLSDFSIAK--LLTGEDQSMTQTQ 334
ASAL++LH + I H DLKP N+L + N V+ + DF + L G+ ++ +
Sbjct: 121 ASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPE 177
Query: 335 TLATIG---YMAPE----YGREGRV-STNGDVYSFGIMLMETFTGKKP 374
L G YMAPE + E + D++S G++L +G P
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+P G + ++ + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F IG G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+P G + ++ + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 171 ATDGFS---------ENNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRALKGFDVEC 220
+TD FS + +++G G V L E AVK+ Q G E
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREV 61
Query: 221 EMMKSIR-HRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDV 279
EM+ + HRN++++I E+ LV E M GS+ +++ + ++ + ++ DV
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-VVQDV 120
Query: 280 ASALEYLHFGYSAPIIHCDLKPSNVLLDD-NMVA--HLSDFSIAK--LLTGEDQSMTQTQ 334
ASAL++LH + I H DLKP N+L + N V+ + DF + L G+ ++ +
Sbjct: 121 ASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPE 177
Query: 335 TLATIG---YMAPE----YGREGRV-STNGDVYSFGIMLMETFTGKKP 374
L G YMAPE + E + D++S G++L +G P
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 91/225 (40%), Gaps = 31/225 (13%)
Query: 170 RATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRH 228
R F E ++G+G FG V KAR D A+K L E ++ S+ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASLNH 61
Query: 229 -------------RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNI 275
RN +K + + + EY + +L ++S N + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 276 MIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAK-------LLTGEDQ 328
+ AL Y+H S IIH +LKP N+ +D++ + DF +AK +L + Q
Sbjct: 122 FRQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 329 SM-----TQTQTLATIGYMAPEY-GREGRVSTNGDVYSFGIMLME 367
++ T + T Y+A E G + D YS GI+ E
Sbjct: 179 NLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+P G + ++ + R + EYLH
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 151
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 152 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 204
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 125/281 (44%), Gaps = 39/281 (13%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCG--RALKGFDVECEMMKSIRHRN--LIKVIS 236
IG GG V++ A+K NL+ + L + E + ++ + +I++
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 237 TCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIH 296
+++ +V+E + L ++ I D ++R + + LE +H + I+H
Sbjct: 80 YEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWERKSYW---KNMLEAVHTIHQHGIVH 134
Query: 297 CDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-TN 355
DLKP+N L+ D M+ L DF IA + + S+ + + T+ YM PE ++ S N
Sbjct: 135 SDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 193
Query: 356 G----------DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405
G DV+S G +L GK P +I N +++ H + D P +E
Sbjct: 194 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLHAIID--PNHEIEFPD--- 247
Query: 406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVA 446
+ ++D+ V K C C P+QRI+ E++A
Sbjct: 248 IPEKDLQDVLK--C----------CLKRDPKQRISIPELLA 276
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+P G + ++ + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 122/261 (46%), Gaps = 48/261 (18%)
Query: 181 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRALKGFDVECEMMKSIRHRNLIKV 234
IG G +G V A + + VA++ F Q C R L+ E +++ RH N+I +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 90
Query: 235 ISTCSNEEFKALVLEYMPHGSL-EKYMYSSNYILDIFQRLN------IMIDVASALEYLH 287
N+ +A +E M + + M + Y L Q L+ + + L+Y+H
Sbjct: 91 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 288 FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQTQTLATIGYMAPEY 346
SA ++H DLKPSN+LL+ + DF +A++ + D + T+ +AT Y APE
Sbjct: 146 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405
+ T D++S G +L E + + IF G KH+++ I + ++G+
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQLNHI--LGILGSP- 251
Query: 406 LSQEDIHFVAKEQCVSCVFNL 426
SQED+ +C+ NL
Sbjct: 252 -SQEDL---------NCIINL 262
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 3/58 (5%)
Query: 48 GAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFSVESFEGNELLCGSPNLQVPPC 105
G +P L +L +L +LN+SFN L GEIP+GG + F V ++ N+ LCGSP +P C
Sbjct: 258 GTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSP---LPAC 312
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Query: 2 IPTEIGGLKNLEYLFLG-YNRLQGPIPDSFGDLIXXXXXXXXXXXXXGAIPASLEKLSYL 60
IP+ + L L +L++G N L GPIP + L GAIP L ++ L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 61 ENLNLSFNKLEGEIPRG-GPFRNFSVESFEGNEL 93
L+ S+N L G +P N +F+GN +
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRI 161
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+P G + ++ + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 24/215 (11%)
Query: 181 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRA-LKGFDVECEMMKSIRHR-NLI 232
+GRG FG V +A + VAVK+ + + E +++ I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 233 KVISTCSNEEFKALVL-EYMPHGSLEKYMYSSNY-----------ILDIFQRLNIMIDVA 280
++ C+ +V+ E+ G+L Y+ S L + + VA
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 281 SALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIG 340
+E+L S IH DL N+LL + V + DF +A+ + + + + +
Sbjct: 155 KGMEFLA---SRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 341 YMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 374
+MAPE + + DV+SFG++L E F+ G P
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+P G + ++ + R + EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+P G + ++ + R + EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+P G + ++ + R + EYLH
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 151
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 152 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 204
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+P G + ++ + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+P G + ++ + R + EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 125/281 (44%), Gaps = 39/281 (13%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCG--RALKGFDVECEMMKSIRHRN--LIKVIS 236
IG GG V++ A+K NL+ + L + E + ++ + +I++
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 237 TCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIH 296
+++ +V+E + L ++ I D ++R + + LE +H + I+H
Sbjct: 76 YEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWERKSYW---KNMLEAVHTIHQHGIVH 130
Query: 297 CDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-TN 355
DLKP+N L+ D M+ L DF IA + + S+ + + T+ YM PE ++ S N
Sbjct: 131 SDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 189
Query: 356 G----------DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405
G DV+S G +L GK P +I N +++ H + D P +E
Sbjct: 190 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLHAIID--PNHEIEFPD--- 243
Query: 406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVA 446
+ ++D+ V K C C P+QRI+ E++A
Sbjct: 244 IPEKDLQDVLK--C----------CLKRDPKQRISIPELLA 272
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+P G + ++ + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 173 DGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCGRALKGFDV-ECEMMKSIRHRN 230
D F + + +G G G V+K + G+ +A K+ +L+ A++ + E +++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILD-IFQRLNIMIDVASALEYLHFG 289
++ ++ ++ +E+M GSL++ + + I + I +++I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 123
Query: 290 YSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE 349
+ I+H D+KPSN+L++ L DF ++ L SM + + T YM+PE +
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQG 177
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKP 374
S D++S G+ L+E G+ P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 173 DGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCGRALKGFDV-ECEMMKSIRHRN 230
D F + + +G G G V+K + G+ +A K+ +L+ A++ + E +++
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILD-IFQRLNIMIDVASALEYLHFG 289
++ ++ ++ +E+M GSL++ + + I + I +++I V L YL
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 185
Query: 290 YSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE 349
+ I+H D+KPSN+L++ L DF ++ L SM + + T YM+PE +
Sbjct: 186 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQG 239
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKP 374
S D++S G+ L+E G+ P
Sbjct: 240 THYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+P G + ++ + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 106/225 (47%), Gaps = 35/225 (15%)
Query: 181 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRALKGFDVECEMMKSIRHRNLIKV 234
IG G +G V A + + VA+K F Q C R L+ E +++ RH N+I +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 84
Query: 235 ISTCSNEEFKALVLEYMPHGSL-EKYMYSSNYILDIFQRLN------IMIDVASALEYLH 287
N+ +A +E M + + M + Y L Q L+ + + L+Y+H
Sbjct: 85 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 139
Query: 288 FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQTQTLATIGYMAPEY 346
SA ++H DLKPSN+LL+ + DF +A++ + D + T+ +AT Y APE
Sbjct: 140 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 196
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVN 390
+ T D++S G +L E + + IF G KH+++
Sbjct: 197 MLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 233
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+P G + ++ + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 173 DGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCGRALKGFDV-ECEMMKSIRHRN 230
D F + + +G G G V+K + G+ +A K+ +L+ A++ + E +++
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILD-IFQRLNIMIDVASALEYLHFG 289
++ ++ ++ +E+M GSL++ + + I + I +++I V L YL
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 150
Query: 290 YSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE 349
+ I+H D+KPSN+L++ L DF ++ L SM + + T YM+PE +
Sbjct: 151 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQG 204
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKP 374
S D++S G+ L+E G+ P
Sbjct: 205 THYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+P G + ++ + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 219 ECEMMKSIRHRNLIKVISTCS--NEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIM 276
E ++K + H N++K++ NE+ +V E + G + + D Q
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSED--QARFYF 143
Query: 277 IDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 336
D+ +EYLH+ IIH D+KPSN+L+ ++ ++DF ++ G D + + T+
Sbjct: 144 QDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALL--SNTV 198
Query: 337 ATIGYMAPEYGREGRVSTNG---DVYSFGIMLMETFTGKKP 374
T +MAPE E R +G DV++ G+ L G+ P
Sbjct: 199 GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 173 DGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCGRALKGFDV-ECEMMKSIRHRN 230
D F + + +G G G V+K + G+ +A K+ +L+ A++ + E +++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILD-IFQRLNIMIDVASALEYLHFG 289
++ ++ ++ +E+M GSL++ + + I + I +++I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 123
Query: 290 YSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE 349
+ I+H D+KPSN+L++ L DF ++ L SM + + T YM+PE +
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQG 177
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKP 374
S D++S G+ L+E G+ P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 173 DGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCGRALKGFDV-ECEMMKSIRHRN 230
D F + + +G G G V+K + G+ +A K+ +L+ A++ + E +++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILD-IFQRLNIMIDVASALEYLHFG 289
++ ++ ++ +E+M GSL++ + + I + I +++I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 123
Query: 290 YSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE 349
+ I+H D+KPSN+L++ L DF ++ L SM + + T YM+PE +
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQG 177
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKP 374
S D++S G+ L+E G+ P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 23/171 (13%)
Query: 279 VASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLAT 338
VA +E+L S IH DL N+LL +N V + DF +A+ + + + T
Sbjct: 208 VARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 339 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPIST 397
+ +MAPE + ST DV+S+G++L E F+ G P P
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSP------------------YPGVQ 306
Query: 398 MEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448
M+ + L +E + A E ++ + ++C P++R E+V KL
Sbjct: 307 MDEDFCSRL-REGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 24/215 (11%)
Query: 181 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRA-LKGFDVECEMMKSIRHR-NLI 232
+GRG FG V +A + VAVK+ + + E +++ I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 233 KVISTCSNEEFKALVL-EYMPHGSLEKYMYSSNY-------ILDIFQRLNIMI----DVA 280
++ C+ +V+ E+ G+L Y+ S + F L +I VA
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 281 SALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIG 340
+E+L S IH DL N+LL + V + DF +A+ + + + + +
Sbjct: 155 KGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 341 YMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 374
+MAPE + + DV+SFG++L E F+ G P
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 125/281 (44%), Gaps = 39/281 (13%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCG--RALKGFDVECEMMKSIRHRN--LIKVIS 236
IG GG V++ A+K NL+ + L + E + ++ + +I++
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 237 TCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIH 296
+++ +V+E + L ++ I D ++R + + LE +H + I+H
Sbjct: 96 YEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWERKSYW---KNMLEAVHTIHQHGIVH 150
Query: 297 CDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-TN 355
DLKP+N L+ D M+ L DF IA + + S+ + + T+ YM PE ++ S N
Sbjct: 151 SDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 209
Query: 356 G----------DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405
G DV+S G +L GK P +I N +++ H + D P +E
Sbjct: 210 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLHAIID--PNHEIEFPD--- 263
Query: 406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVA 446
+ ++D+ V K C C P+QRI+ E++A
Sbjct: 264 IPEKDLQDVLK--C----------CLKRDPKQRISIPELLA 292
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+P G + ++ + R + EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 179
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 232
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 173 DGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCGRALKGFDV-ECEMMKSIRHRN 230
D F + + +G G G V+K + G+ +A K+ +L+ A++ + E +++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILD-IFQRLNIMIDVASALEYLHFG 289
++ ++ ++ +E+M GSL++ + + I + I +++I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 123
Query: 290 YSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE 349
+ I+H D+KPSN+L++ L DF ++ L SM + + T YM+PE +
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQG 177
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKP 374
S D++S G+ L+E G+ P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 173 DGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCGRALKGFDV-ECEMMKSIRHRN 230
D F + + +G G G V+K + G+ +A K+ +L+ A++ + E +++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILD-IFQRLNIMIDVASALEYLHFG 289
++ ++ ++ +E+M GSL++ + + I + I +++I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 123
Query: 290 YSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE 349
+ I+H D+KPSN+L++ L DF ++ L SM + + T YM+PE +
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQG 177
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKP 374
S D++S G+ L+E G+ P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 91/196 (46%), Gaps = 13/196 (6%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDV----ECEMMKSIRHRNLIKVIS 236
IG G +G VYKA+ G A+K L+ + +G E ++K ++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLE--KEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 237 TCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIH 296
++ LV E++ L+K + L+ + ++ + + + Y H ++H
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLH 123
Query: 297 CDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY-GREGRVSTN 355
DLKP N+L++ ++DF +A+ + T + T+ Y AP+ + ST
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEIVTLWYRAPDVLMGSKKYSTT 181
Query: 356 GDVYSFGIMLMETFTG 371
D++S G + E G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 172 TDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVK--------VFNLQCGRALKGFDVECEM 222
+ F +L+G G +G V A G VA+K +F L+ R +K +
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIK-------I 62
Query: 223 MKSIRHRNLIKVISTCSNEEFK-----ALVLEYMP---HGSLEKYMYSSNYI-LDIFQRL 273
+K +H N+I + + + F+ ++ E M H + M S ++I I+Q L
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL 122
Query: 274 NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL---------- 323
A++ LH + +IH DLKPSN+L++ N + DF +A+++
Sbjct: 123 R-------AVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 324 TGEDQSMTQTQTLATIGYMAPEYG-REGRVSTNGDVYSFGIMLMETF 369
TG+ M T+ +AT Y APE + S DV+S G +L E F
Sbjct: 173 TGQQSGM--TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 125/281 (44%), Gaps = 39/281 (13%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCG--RALKGFDVECEMMKSIRHRN--LIKVIS 236
IG GG V++ A+K NL+ + L + E + ++ + +I++
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 237 TCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIH 296
+++ +V+E + L ++ I D ++R + + LE +H + I+H
Sbjct: 77 YEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWERKSYW---KNMLEAVHTIHQHGIVH 131
Query: 297 CDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-TN 355
DLKP+N L+ D M+ L DF IA + + S+ + + T+ YM PE ++ S N
Sbjct: 132 SDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 190
Query: 356 G----------DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405
G DV+S G +L GK P +I N +++ H + D P +E
Sbjct: 191 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLHAIID--PNHEIEFPD--- 244
Query: 406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVA 446
+ ++D+ V K C C P+QRI+ E++A
Sbjct: 245 IPEKDLQDVLK--C----------CLKRDPKQRISIPELLA 273
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 121/261 (46%), Gaps = 48/261 (18%)
Query: 181 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRALKGFDVECEMMKSIRHRNLIKV 234
IG G +G V A + + VA+K F Q C R L+ E +++ RH N+I +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 90
Query: 235 ISTCSNEEFKALVLEYMPHGSL-EKYMYSSNYILDIFQRLN------IMIDVASALEYLH 287
N+ +A +E M + + M + Y L Q L+ + + L+Y+H
Sbjct: 91 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 288 FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQTQTLATIGYMAPEY 346
SA ++H DLKPSN+LL+ + DF +A++ + D + + +AT Y APE
Sbjct: 146 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEI 202
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405
+ T D++S G +L E + + IF G KH+++ I + ++G+
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQLNHI--LGILGSP- 251
Query: 406 LSQEDIHFVAKEQCVSCVFNL 426
SQED+ +C+ NL
Sbjct: 252 -SQEDL---------NCIINL 262
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 121/261 (46%), Gaps = 48/261 (18%)
Query: 181 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQ--CGRALKGFDVECEMMKSIRHRNLIKV 234
IG G +G V A + + VA+K F Q C R L+ E +++ RH N+I +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 91
Query: 235 ISTCSNEEFKALVLEYMPHGSL-EKYMYSSNYILDIFQRLN------IMIDVASALEYLH 287
N+ +A +E M + + M + Y L Q L+ + + L+Y+H
Sbjct: 92 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 146
Query: 288 FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQTQTLATIGYMAPEY 346
SA ++H DLKPSN+LL+ + DF +A++ + D + + +AT Y APE
Sbjct: 147 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEI 203
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405
+ T D++S G +L E + + IF G KH+++ I + ++G+
Sbjct: 204 MLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQLNHI--LGILGSP- 252
Query: 406 LSQEDIHFVAKEQCVSCVFNL 426
SQED+ +C+ NL
Sbjct: 253 -SQEDL---------NCIINL 263
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 130/280 (46%), Gaps = 34/280 (12%)
Query: 173 DGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCGRALKGFDV-ECEMMKSIRHRN 230
D F + + +G G G V+K + G+ +A K+ +L+ A++ + E +++
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILD-IFQRLNIMIDVASALEYLHFG 289
++ ++ ++ +E+M GSL++ + + I + I +++I V L YL
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 142
Query: 290 YSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE 349
+ I+H D+KPSN+L++ L DF ++ L SM + + T YM+PE +
Sbjct: 143 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQG 196
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMT----LKHWVNDWLPISTMEVVGANL 405
S D++S G+ L+E G+ P +G M L + VN+ P + + +
Sbjct: 197 THYSVQSDIWSMGLSLVEMAVGRYPIGS-GSGSMAIFELLDYIVNEPPP-----KLPSGV 250
Query: 406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIV 445
S E FV K C +++P +R + ++++
Sbjct: 251 FSLEFQDFVNK-------------CLIKNPAERADLKQLM 277
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 95/197 (48%), Gaps = 13/197 (6%)
Query: 181 IGRGGFGSVYK--ARLGDGMEVAVKVFNLQCGRALKGFDV-ECEMMKSIRHRNLIKVIST 237
+G G + +VYK ++L D + VA+K L+ + E ++K ++H N++ +
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
E+ LV EY+ L++Y+ I+++ N+ + + L L + + ++H
Sbjct: 69 IHTEKSLTLVFEYLD-KDLKQYLDDCGNIINMH---NVKLFLFQLLRGLAYCHRQKVLHR 124
Query: 298 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE--YGREGRVSTN 355
DLKP N+L+++ L+DF +A+ + T + T+ Y P+ G ST
Sbjct: 125 DLKPQNLLINERGELKLADFGLAR--AKSIPTKTYDNEVVTLWYRPPDILLGSTD-YSTQ 181
Query: 356 GDVYSFGIMLMETFTGK 372
D++ G + E TG+
Sbjct: 182 IDMWGVGCIFYEMATGR 198
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 91/196 (46%), Gaps = 13/196 (6%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDV----ECEMMKSIRHRNLIKVIS 236
IG G +G VYKA+ G A+K L+ + +G E ++K ++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLE--KEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 237 TCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIH 296
++ LV E++ L+K + L+ + ++ + + + Y H ++H
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLH 123
Query: 297 CDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY-GREGRVSTN 355
DLKP N+L++ ++DF +A+ + T + T+ Y AP+ + ST
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPDVLMGSKKYSTT 181
Query: 356 GDVYSFGIMLMETFTG 371
D++S G + E G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 91/196 (46%), Gaps = 13/196 (6%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDV----ECEMMKSIRHRNLIKVIS 236
IG G +G VYKA+ G A+K L+ + +G E ++K ++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLE--KEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 237 TCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIH 296
++ LV E++ L+K + L+ + ++ + + + Y H ++H
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLH 123
Query: 297 CDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY-GREGRVSTN 355
DLKP N+L++ ++DF +A+ + T + T+ Y AP+ + ST
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPDVLMGSKKYSTT 181
Query: 356 GDVYSFGIMLMETFTG 371
D++S G + E G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 95/218 (43%), Gaps = 27/218 (12%)
Query: 181 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRA-LKGFDVECEMMKSIRHR-NLI 232
+GRG FG V +A + VAVK+ + + E +++ I H N++
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 233 KVISTCSNEEFKALVL-EYMPHGSLEKYMYSSNY----------ILDIFQRLNIMI---- 277
++ C+ +V+ E+ G+L Y+ S + F L +I
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 278 DVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA 337
VA +E+L S IH DL N+LL + V + DF +A+ + + + +
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 338 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 374
+ +MAPE + + DV+SFG++L E F+ G P
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 95/211 (45%), Gaps = 12/211 (5%)
Query: 170 RATDGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQ--CGRALKGFDVECEMMKSI 226
R T+ + +G+G F V + ++ G E A + N + R + + E + + +
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL 67
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
+H N++++ + S E L+ + + G L + + + Y + + + LE +
Sbjct: 68 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY----YSEADASHCIQQILEAV 123
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNM---VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
+ ++H +LKP N+LL + L+DF +A + GE Q+ T GY++
Sbjct: 124 LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTPGYLS 181
Query: 344 PEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
PE R+ D+++ G++L G P
Sbjct: 182 PEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 99/205 (48%), Gaps = 11/205 (5%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV-ECEMMKSIRHRN 230
D F + +G G G V K + G+ +A K+ +L+ A++ + E +++
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILD-IFQRLNIMIDVASALEYLHFG 289
++ ++ ++ +E+M GSL++ + + I + I +++I V L YL
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIA--VLRGLAYLREK 133
Query: 290 YSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE 349
+ I+H D+KPSN+L++ L DF ++ L SM + + T YMAPE +
Sbjct: 134 HQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMAPERLQG 187
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKP 374
S D++S G+ L+E G+ P
Sbjct: 188 THYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 172 TDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVK--------VFNLQCGRALKGFDVECEM 222
+ F +L+G G +G V A G VA+K +F L+ R +K +
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIK-------I 62
Query: 223 MKSIRHRNLIKVISTCSNEEFK-----ALVLEYMP---HGSLEKYMYSSNYI-LDIFQRL 273
+K +H N+I + + + F+ ++ E M H + M S ++I I+Q L
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL 122
Query: 274 NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL---------- 323
A++ LH + +IH DLKPSN+L++ N + DF +A+++
Sbjct: 123 R-------AVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 324 TGEDQSMTQTQTLATIGYMAPEYG-REGRVSTNGDVYSFGIMLMETF 369
TG+ M T+ +AT Y APE + S DV+S G +L E F
Sbjct: 173 TGQQSGM--TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
IG G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 149
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 150 DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 204
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 205 YNQTVDIWSVGCIMAELLTGR 225
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY P G + ++ + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+++D ++DF +AK + G + T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 125/281 (44%), Gaps = 39/281 (13%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCG--RALKGFDVECEMMKSIRHRN--LIKVIS 236
IG GG V++ A+K NL+ + L + E + ++ + +I++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 237 TCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIH 296
+++ +V+E + L ++ I D ++R + + LE +H + I+H
Sbjct: 124 YEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWERKSYW---KNMLEAVHTIHQHGIVH 178
Query: 297 CDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-TN 355
DLKP+N L+ D M+ L DF IA + + S+ + + T+ YM PE ++ S N
Sbjct: 179 SDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 237
Query: 356 G----------DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405
G DV+S G +L GK P +I N +++ H + D P +E
Sbjct: 238 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLHAIID--PNHEIEFPD--- 291
Query: 406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVA 446
+ ++D+ V K C C P+QRI+ E++A
Sbjct: 292 IPEKDLQDVLK--C----------CLKRDPKQRISIPELLA 320
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 28/219 (12%)
Query: 181 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRA-LKGFDVECEMMKSIRHR-NLI 232
+GRG FG V +A + VAVK+ + + E +++ I H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 233 KVISTCSNEEFKALVL-EYMPHGSLEKYMYSSNY-----------ILDIFQRLNIMI--- 277
++ C+ +V+ E+ G+L Y+ S + F L +I
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 278 -DVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 336
VA +E+L S IH DL N+LL + V + DF +A+ + + + +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 337 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 374
+ +MAPE + + DV+SFG++L E F+ G P
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 39/239 (16%)
Query: 181 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQ----CGRALKGFDVECEMMKSIRHRNLIKV 234
+G G +G V A R+ + VAVK+ +++ C +K E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKK---EIXINKMLNHENVVKF 70
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRL--NIMIDVASALEYLH----- 287
+ L LEY G L F R+ +I + A + H
Sbjct: 71 YGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 288 --FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
+ + I H D+KP N+LLD+ +SDF +A + ++ + T+ Y+APE
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 177
Query: 346 YGREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW------VNDWLPIST 397
+ DV+S GI+L G+ P ++ + W +N W I +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 236
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 93/218 (42%), Gaps = 20/218 (9%)
Query: 165 HLELCRATDGFSENNLIGRGGFG----SVYKARLGDGMEVAVKVFNLQCGRALKGFDVEC 220
H + TDG+ IG G + ++KA ME AVK+ + + ++
Sbjct: 14 HRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKAT---NMEFAVKIIDKSKRDPTEEIEI-- 68
Query: 221 EMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVA 280
+++ +H N+I + + ++ +V E M G L + + + + ++ +
Sbjct: 69 -LLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSE-REASAVLFTIT 126
Query: 281 SALEYLHFGYSAPIIHCDLKPSNVLLDDNM----VAHLSDFSIAKLLTGEDQSMTQTQTL 336
+EYLH + ++H DLKPSN+L D + DF AK L E+ +
Sbjct: 127 KTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL--MTPC 181
Query: 337 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
T ++APE D++S G++L TG P
Sbjct: 182 YTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 28/219 (12%)
Query: 181 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRA-LKGFDVECEMMKSIRHR-NLI 232
+GRG FG V +A + VAVK+ + + E +++ I H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 233 KVISTCSNEEFKALVL-EYMPHGSLEKYMYSSNY-----------ILDIFQRLNIMI--- 277
++ C+ +V+ E+ G+L Y+ S + F L +I
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 278 -DVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 336
VA +E+L S IH DL N+LL + V + DF +A+ + + + +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 337 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 374
+ +MAPE + + DV+SFG++L E F+ G P
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 25/221 (11%)
Query: 180 LIGRGGFGSVYKA-RLGDGMEVAVKVF--NLQCGRALKGFDVECEMMKSI--------RH 228
L+G+GGFG+V+ RL D ++VA+KV N G + V C + ++ H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 229 RNLIKVISTCSNEEFKALVLEY-MPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLH 287
+I+++ +E LVLE +P L Y+ + + R V +A+++ H
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRC-FFGQVVAAIQHCH 156
Query: 288 FGYSAPIIHCDLKPSNVLLD-DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY 346
S ++H D+K N+L+D A L DF LL E T T Y PE+
Sbjct: 157 ---SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE----PYTDFDGTRVYSPPEW 209
Query: 347 -GREGRVSTNGDVYSFGIMLMETFTGKKP---TNEIFNGEM 383
R + V+S GI+L + G P EI E+
Sbjct: 210 ISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAEL 250
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 126/281 (44%), Gaps = 39/281 (13%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCG--RALKGFDVECEMMKSIRHRN--LIKVIS 236
IG GG V++ A+K NL+ + L + E + ++ + +I++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 237 TCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIH 296
+++ +V+E + L ++ I D ++R + ++ LE +H + I+H
Sbjct: 124 YEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWERKSYWKNM---LEAVHTIHQHGIVH 178
Query: 297 CDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-TN 355
DLKP+N L+ D M+ L DF IA + + S+ + + T+ YM PE ++ S N
Sbjct: 179 SDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 237
Query: 356 G----------DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405
G DV+S G +L GK P +I N +++ H + D P +E
Sbjct: 238 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLHAIID--PNHEIEFPD--- 291
Query: 406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVA 446
+ ++D+ V K C C P+QRI+ E++A
Sbjct: 292 IPEKDLQDVLK--C----------CLKRDPKQRISIPELLA 320
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 95/219 (43%), Gaps = 28/219 (12%)
Query: 181 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRA-LKGFDVECEMMKSIRHR-NLI 232
+GRG FG V +A + VAVK+ + + E +++ I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 233 KVISTCSNEEFKALVL-EYMPHGSLEKYMYSSNYIL--------DIFQRLNIM------- 276
++ C+ +V+ E+ G+L Y+ S D+++ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 277 IDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 336
VA +E+L S IH DL N+LL + V + DF +A+ + + + +
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 337 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 374
+ +MAPE + + DV+SFG++L E F+ G P
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY P G + ++ + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+++D ++DF AK + G + T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY P G + ++ + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+++D ++DF AK + G + T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 39/239 (16%)
Query: 181 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQ----CGRALKGFDVECEMMKSIRHRNLIKV 234
+G G +G V A R+ + VAVK+ +++ C +K E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKK---EIXINKMLNHENVVKF 69
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRL--NIMIDVASALEYLH----- 287
+ L LEY G L F R+ +I + A + H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 288 --FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
+ + I H D+KP N+LLD+ +SDF +A + ++ + T+ Y+APE
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 346 YGREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW------VNDWLPIST 397
+ DV+S GI+L G+ P ++ + W +N W I +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 39/229 (17%)
Query: 170 RATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDV--ECEMMKSI 226
R F +GRGGFG V++A+ D A+K L R L V E + + +
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLP-NRELAREKVMREVKALAKL 60
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSS-------------NYILDIFQR- 272
H +++ N + E + S + Y+Y N I +R
Sbjct: 61 EHPGIVRYF----NAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERE 116
Query: 273 ----LNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 328
L+I + +A A+E+LH S ++H DLKPSN+ + V + DF + + +++
Sbjct: 117 RSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEE 173
Query: 329 SMT----------QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLME 367
T T + T YM+PE S D++S G++L E
Sbjct: 174 EQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFE 222
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E + +++
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +VLEY P G + ++ + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 164 SHLELCRATDGFSENNLIGRGGFGS----VYKARLGDGMEVAVKVFNLQCGRALKGFDVE 219
SH+ L +DG+ IG G + V+KA ME AVKV + ++ + E
Sbjct: 19 SHMNLV-FSDGYVVKETIGVGSYSECKRCVHKA---TNMEYAVKVID----KSKRDPSEE 70
Query: 220 CE-MMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMID 278
E +++ +H N+I + + + LV E M G L + + + ++
Sbjct: 71 IEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-VLHT 129
Query: 279 VASALEYLHFGYSAPIIHCDLKPSNVLLDDNM----VAHLSDFSIAKLLTGEDQSMTQTQ 334
+ +EYLH S ++H DLKPSN+L D + DF AK L E+ +
Sbjct: 130 IGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL--MT 184
Query: 335 TLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
T ++APE + D++S GI+L G P
Sbjct: 185 PCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 39/239 (16%)
Query: 181 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQ----CGRALKGFDVECEMMKSIRHRNLIKV 234
+G G +G V A R+ + VAVK+ +++ C +K E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 69
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRL--NIMIDVASALEYLH----- 287
+ L LEY G L F R+ +I + A + H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 288 --FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
+ + I H D+KP N+LLD+ +SDF +A + ++ + T+ Y+APE
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 346 YGREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW------VNDWLPIST 397
+ DV+S GI+L G+ P ++ + W +N W I +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNPWKKIDS 235
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 39/239 (16%)
Query: 181 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQ----CGRALKGFDVECEMMKSIRHRNLIKV 234
+G G +G V A R+ + VAVK+ +++ C +K E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKK---EIXINKMLNHENVVKF 69
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRL--NIMIDVASALEYLH----- 287
+ L LEY G L F R+ +I + A + H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 288 --FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
+ + I H D+KP N+LLD+ +SDF +A + ++ + T+ Y+APE
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 346 YGREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW------VNDWLPIST 397
+ DV+S GI+L G+ P ++ + W +N W I +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY P G + ++ + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+++D ++DF +AK + G + T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 98/202 (48%), Gaps = 18/202 (8%)
Query: 181 IGRGGFGSVYKARLGDGME-VAVKVFNLQ------CGRALKGFDVECEMMKSIRHRNLIK 233
IG G +G+V+KA+ + E VA+K L AL+ E ++K ++H+N+++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR----EICLLKELKHKNIVR 65
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAP 293
+ +++ LV E+ L+KY S N LD + + + L + H S
Sbjct: 66 LHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRN 121
Query: 294 IIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV- 352
++H DLKP N+L++ N L++F +A+ + + + T+ Y P+ ++
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY--SAEVVTLWYRPPDVLFGAKLY 179
Query: 353 STNGDVYSFGIMLMETFTGKKP 374
ST+ D++S G + E +P
Sbjct: 180 STSIDMWSAGCIFAELANAGRP 201
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNAMH 199
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGXVATRWYRAPEIMLNWMH 199
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 149
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 150 DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 204
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 205 YNQTVDIWSVGCIMAELLTGR 225
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 18/188 (9%)
Query: 219 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMID 278
E ++KS+ H N+IK+ ++++ LV E+ G L + + + + D NIM
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR-HKFDECDAANIMKQ 154
Query: 279 VASALEYLHFGYSAPIIHCDLKPSNVLLDDN---MVAHLSDFSIAKLLTGEDQSMTQTQT 335
+ S + YLH I+H D+KP N+LL++ + + DF ++ + +
Sbjct: 155 ILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS---KDYKLRDR 208
Query: 336 LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP-----TNEIFNGEMTLKHW-- 388
L T Y+APE ++ + + DV+S G+++ G P +I K++
Sbjct: 209 LGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFD 267
Query: 389 VNDWLPIS 396
NDW IS
Sbjct: 268 FNDWKNIS 275
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 124/281 (44%), Gaps = 39/281 (13%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCG--RALKGFDVECEMMKSIRHRN--LIKVIS 236
IG GG V++ A+K NL+ + L + E + ++ + +I++
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 237 TCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIH 296
+++ +V+E + L ++ I D ++R + + LE +H + I+H
Sbjct: 96 YEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWERKSYW---KNMLEAVHTIHQHGIVH 150
Query: 297 CDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-TN 355
DLKP+N L+ D M+ L DF IA + + + + + T+ YM PE ++ S N
Sbjct: 151 SDLKPANFLIVDGMLK-LIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSREN 209
Query: 356 G----------DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405
G DV+S G +L GK P +I N +++ H + D P +E
Sbjct: 210 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLHAIID--PNHEIEFPD--- 263
Query: 406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVA 446
+ ++D+ V K C C P+QRI+ E++A
Sbjct: 264 IPEKDLQDVLK--C----------CLKRDPKQRISIPELLA 292
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 18/213 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVF------NLQCGRALKGFDVECEMMKS 225
D + +G G F V K R G G E A K + + G + + + E +++
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
IRH N+I + N+ L+LE + G L ++ + + + + + + Y
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQILDGVHY 130
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVAH----LSDFSIAKLLTGEDQSMTQTQTLATIGY 341
LH S I H DLKP N++L D V + L DF IA + ++ T +
Sbjct: 131 LH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEF 184
Query: 342 MAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
+APE + D++S G++ +G P
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 28/219 (12%)
Query: 181 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRA-LKGFDVECEMMKSIRHR-NLI 232
+GRG FG V +A + VAVK+ + + E +++ I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 233 KVISTCSNEEFKALVL-EYMPHGSLEKYMYSSNY-----------ILDIFQRLNIMI--- 277
++ C+ +V+ E+ G+L Y+ S + F L +I
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 278 -DVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 336
VA +E+L S IH DL N+LL + V + DF +A+ + + + +
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 337 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 374
+ +MAPE + + DV+SFG++L E F+ G P
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 18/213 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVF------NLQCGRALKGFDVECEMMKS 225
D + +G G F V K R G G E A K + + G + + + E +++
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
IRH N+I + N+ L+LE + G L ++ + + + + + + Y
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQILDGVHY 123
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVAH----LSDFSIAKLLTGEDQSMTQTQTLATIGY 341
LH S I H DLKP N++L D V + L DF IA + ++ T +
Sbjct: 124 LH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEF 177
Query: 342 MAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
+APE + D++S G++ +G P
Sbjct: 178 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 91/213 (42%), Gaps = 18/213 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKARL-GDGMEVAVK------VFNLQCGRALKGFDVECEMMKS 225
D + +G G F V K R G G E A K + + + G + + + E +++
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
IRH N+I + N+ L+LE + G L ++ + + + + + + Y
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQILDGVHY 144
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVAH----LSDFSIAKLLTGEDQSMTQTQTLATIGY 341
LH S I H DLKP N++L D V + L DF IA + ++ T +
Sbjct: 145 LH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEF 198
Query: 342 MAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
+APE + D++S G++ +G P
Sbjct: 199 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 151
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMH 206
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 207 YNQTVDIWSVGCIMAELLTGR 227
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY P G + ++ + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+++D ++DF AK + G + T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 151
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMH 206
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 207 YNQTVDIWSVGCIMAELLTGR 227
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 155
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 156 DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 210
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 211 YNQTVDIWSVGCIMAELLTGR 231
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 151
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMH 206
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 207 YNQTVDIWSVGCIMAELLTGR 227
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 30/229 (13%)
Query: 171 ATDGFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQ------CGRALKGFDVECEMM 223
+ D + +G G +G VYKA E VA+K L+ G A++ E ++
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR----EVSLL 87
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
K ++HRN+I++ S + L+ EY L+KYM + D+ R+ I + +
Sbjct: 88 KELQHRNIIELKSVIHHNHRLHLIFEYA-ENDLKKYMDKNP---DVSMRV-IKSFLYQLI 142
Query: 284 EYLHFGYSAPIIHCDLKPSNVLL-----DDNMVAHLSDFSIAKLLTGEDQSMTQTQTLAT 338
++F +S +H DLKP N+LL + V + DF +A+ + T + T
Sbjct: 143 NGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQF--THEIIT 200
Query: 339 IGYMAPEYGREGR-VSTNGDVYS----FGIMLMET--FTGKKPTNEIFN 380
+ Y PE R ST+ D++S + MLM+T F G +++F
Sbjct: 201 LWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFK 249
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 141
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 142 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 196
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 197 YNQTVDIWSVGCIMAELLTGR 217
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 41/212 (19%)
Query: 181 IGRGGFGSV---YKARLGDGMEVAVKVFN------LQCGRALKGFDVECEMMKSIRHRNL 231
+G G +GSV Y ARL +VAVK + + R + E ++K ++H N+
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYR----ELRLLKHLKHENV 89
Query: 232 IKVIS----TCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLH 287
I ++ S E+F + L G+ + S + D + ++ + L+Y+H
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF-LVYQLLRGLKYIH 148
Query: 288 FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYG 347
SA IIH DLKPSNV ++++ + DF +A+ D+ MT GY+A +
Sbjct: 149 ---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEMT--------GYVATRWY 194
Query: 348 REGRVSTNG-------DVYSFGIMLMETFTGK 372
R + N D++S G ++ E GK
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + S D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF + + E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 88 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 142
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 143 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 197
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 198 YNQTVDIWSVGCIMAELLTGR 218
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 163
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 164 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 218
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 219 YNQTVDIWSVGCIMAELLTGR 239
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 141
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 142 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 196
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 197 YNQTVDIWSVGCIMAELLTGR 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 140
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 195
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 196 YNQTVDIWSVGCIMAELLTGR 216
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 149
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 150 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 204
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 205 YNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 89 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 143
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 144 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 198
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 199 YNQTVDIWSVGCIMAELLTGR 219
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 150
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 151 DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 205
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 206 YNQTVDIWSVGCIMAELLTGR 226
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 164
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 219
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 220 YNQTVDIWSVGCIMAELLTGR 240
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 28/219 (12%)
Query: 181 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRA-LKGFDVECEMMKSIRHR-NLI 232
+GRG FG V +A + VAVK+ + + E +++ I H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 233 KVISTCSNEEFKALVL-EYMPHGSLEKYMYSSNY-----------ILDIFQRLNIMI--- 277
++ C+ +V+ E+ G+L Y+ S + F L +I
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 278 -DVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 336
VA +E+L S IH DL N+LL + V + DF +A+ + + + +
Sbjct: 146 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 337 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 374
+ +MAPE + + DV+SFG++L E F+ G P
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 146
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 201
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 202 YNQTVDIWSVGCIMAELLTGR 222
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 146
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 147 DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 201
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 202 YNQTVDIWSVGCIMAELLTGR 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 151
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 206
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 207 YNQTVDIWSVGCIMAELLTGR 227
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 150
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 205
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 206 YNQTVDIWSVGCIMAELLTGR 226
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 167
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 168 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 222
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 223 YNQTVDIWSVGCIMAELLTGR 243
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 146
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 201
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 202 YNQTVDIWSVGCIMAELLTGR 222
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 95/219 (43%), Gaps = 28/219 (12%)
Query: 181 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRA-LKGFDVECEMMKSIRHR-NLI 232
+GRG FG V +A + VAVK+ + + E +++ I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 233 KVISTCSNEEFKALVL-EYMPHGSLEKYMYSSNYIL--------DIFQRLNIM------- 276
++ C+ +V+ E+ G+L Y+ S D+++ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 277 IDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 336
VA +E+L S IH DL N+LL + V + DF +A+ + + + +
Sbjct: 155 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 337 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 374
+ +MAPE + + DV+SFG++L E F+ G P
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY P G + ++ + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+++D ++DF AK + G + T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 156
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 211
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 212 YNQTVDIWSVGCIMAELLTGR 232
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 39/239 (16%)
Query: 181 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQ----CGRALKGFDVECEMMKSIRHRNLIKV 234
+G G +G V A R+ + VAVK+ +++ C +K E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 69
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRL--NIMIDVASALEYLH----- 287
+ L LEY G L F R+ +I + A + H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 288 --FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
+ + I H D+KP N+LLD+ +SDF +A + ++ + T+ Y+APE
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 346 YGREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW------VNDWLPIST 397
+ DV+S GI+L G+ P ++ + W +N W I +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 156
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 211
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 212 YNQTVDIWSVGCIMAELLTGR 232
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 149
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 150 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 204
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 205 YNQTVDIWSVGCIMAELLTGR 225
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 146
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 201
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 202 YNQTVDIWSVGCIMAELLTGR 222
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 150
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 205
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 206 YNQTVDIWSVGCIMAELLTGR 226
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 39/239 (16%)
Query: 181 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQ----CGRALKGFDVECEMMKSIRHRNLIKV 234
+G G +G V A R+ + VAVK+ +++ C +K E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 69
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRL--NIMIDVASALEYLH----- 287
+ L LEY G L F R+ +I + A + H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 288 --FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
+ + I H D+KP N+LLD+ +SDF +A + ++ + T+ Y+APE
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 346 YGREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW------VNDWLPIST 397
+ DV+S GI+L G+ P ++ + W +N W I +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 87/201 (43%), Gaps = 14/201 (6%)
Query: 180 LIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDV--ECEMMKSIRHRNLIKVIS 236
++G+G FG V K + E AVKV N + + E E++K + H N++K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 237 TCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIH 296
+ +V E G L + + I+ V S + Y+H I+H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-HDAARIIKQVFSGITYMH---KHNIVH 144
Query: 297 CDLKPSNVLLDD---NMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS 353
DLKP N+LL+ + + DF ++ T Q+ + T Y+APE R G
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLS---TCFQQNTKMKDRIGTAYYIAPEVLR-GTYD 200
Query: 354 TNGDVYSFGIMLMETFTGKKP 374
DV+S G++L +G P
Sbjct: 201 EKCDVWSAGVILYILLSGTPP 221
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 95/219 (43%), Gaps = 28/219 (12%)
Query: 181 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRA-LKGFDVECEMMKSIRHR-NLI 232
+GRG FG V +A + VAVK+ + + E +++ I H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 233 KVISTCSNEEFKALVL-EYMPHGSLEKYMYSSNYIL--------DIFQRLNIM------- 276
++ C+ +V+ E+ G+L Y+ S D+++ +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 277 IDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 336
VA +E+L S IH DL N+LL + V + DF +A+ + + + +
Sbjct: 146 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 337 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 374
+ +MAPE + + DV+SFG++L E F+ G P
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 39/239 (16%)
Query: 181 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQ----CGRALKGFDVECEMMKSIRHRNLIKV 234
+G G +G V A R+ + VAVK+ +++ C +K E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 69
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRL--NIMIDVASALEYLH----- 287
+ L LEY G L F R+ +I + A + H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 288 --FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
+ + I H D+KP N+LLD+ +SDF +A + ++ + T+ Y+APE
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 346 YGREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW------VNDWLPIST 397
+ DV+S GI+L G+ P ++ + W +N W I +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 39/239 (16%)
Query: 181 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQ----CGRALKGFDVECEMMKSIRHRNLIKV 234
+G G +G V A R+ + VAVK+ +++ C +K E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 69
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRL--NIMIDVASALEYLH----- 287
+ L LEY G L F R+ +I + A + H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 288 --FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
+ + I H D+KP N+LLD+ +SDF +A + ++ + T+ Y+APE
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 346 YGREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW------VNDWLPIST 397
+ DV+S GI+L G+ P ++ + W +N W I +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 155
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 156 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 210
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 211 YNQTVDIWSVGCIMAELLTGR 231
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 39/239 (16%)
Query: 181 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQ----CGRALKGFDVECEMMKSIRHRNLIKV 234
+G G +G V A R+ + VAVK+ +++ C +K E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 70
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRL--NIMIDVASALEYLH----- 287
+ L LEY G L F R+ +I + A + H
Sbjct: 71 YGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 288 --FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
+ + I H D+KP N+LLD+ +SDF +A + ++ + T+ Y+APE
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 346 YGREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW------VNDWLPIST 397
+ DV+S GI+L G+ P ++ + W +N W I +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 236
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 28/219 (12%)
Query: 181 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRA-LKGFDVECEMMKSIRHR-NLI 232
+GRG FG V +A + VAVK+ + + E +++ I H N++
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 233 KVISTCSNEEFKALVL-EYMPHGSLEKYMYSSNY-----------ILDIFQRLNIMI--- 277
++ C+ +V+ E+ G+L Y+ S + F L +I
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 278 -DVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 336
VA +E+L S IH DL N+LL + V + DF +A+ + + + +
Sbjct: 192 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 337 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 374
+ +MAPE + + DV+SFG++L E F+ G P
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 287
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 39/239 (16%)
Query: 181 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQ----CGRALKGFDVECEMMKSIRHRNLIKV 234
+G G +G V A R+ + VAVK+ +++ C +K E + K + H N++K
Sbjct: 13 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 68
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRL--NIMIDVASALEYLH----- 287
+ L LEY G L F R+ +I + A + H
Sbjct: 69 YGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAG 115
Query: 288 --FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
+ + I H D+KP N+LLD+ +SDF +A + ++ + T+ Y+APE
Sbjct: 116 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 175
Query: 346 YGREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW------VNDWLPIST 397
+ DV+S GI+L G+ P ++ + W +N W I +
Sbjct: 176 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 234
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 156
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 211
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 212 YNQTVDIWSVGCIMAELLTGR 232
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 121/261 (46%), Gaps = 48/261 (18%)
Query: 181 IGRGGFGSVYKARLG-DGMEVAVKV---FNLQC--GRALKGFDVECEMMKSIRHRNLIKV 234
IG G +G V A + + VA+K F Q R L+ E +++ RH N+I +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLR----EIKILLRFRHENIIGI 90
Query: 235 ISTCSNEEFKALVLEYMPHGSL-EKYMYSSNYILDIFQRLN------IMIDVASALEYLH 287
N+ +A +E M + + M + Y L Q L+ + + L+Y+H
Sbjct: 91 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 288 FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQTQTLATIGYMAPEY 346
SA ++H DLKPSN+LL+ + DF +A++ + D + T+ +AT Y APE
Sbjct: 146 ---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 347 GREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405
+ T D++S G +L E + + IF G KH+++ I + ++G+
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQLNHI--LGILGSP- 251
Query: 406 LSQEDIHFVAKEQCVSCVFNL 426
SQED+ +C+ NL
Sbjct: 252 -SQEDL---------NCIINL 262
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 39/239 (16%)
Query: 181 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQ----CGRALKGFDVECEMMKSIRHRNLIKV 234
+G G +G V A R+ + VAVK+ +++ C +K E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 69
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRL--NIMIDVASALEYLH----- 287
+ L LEY G L F R+ +I + A + H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 288 --FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
+ + I H D+KP N+LLD+ +SDF +A + ++ + T+ Y+APE
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 346 YGREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW------VNDWLPIST 397
+ DV+S GI+L G+ P ++ + W +N W I +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L K+ + + +V+EY P G + ++ + R + EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 159
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+++D ++DF AK + G + T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 93/220 (42%), Gaps = 32/220 (14%)
Query: 181 IGRGGFGSVYKARLGD---GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+GRG FG V+ R+ D G + AVK L+ RA + + C + S R ++ +
Sbjct: 101 LGRGSFGEVH--RMEDKQTGFQCAVKKVRLEVFRAEE--LMACAGLTSPR---IVPLYGA 153
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
+ + +E + GSL + + L + L + LEYLH S I+H
Sbjct: 154 VREGPWVNIFMELLEGGSLGQ-LVKEQGCLPEDRALYYLGQALEGLEYLH---SRRILHG 209
Query: 298 DLKPSNVLL-DDNMVAHLSDFSIA----------KLLTGEDQSMTQTQTLATIGYMAPEY 346
D+K NVLL D A L DF A LLTG+ T+T +MAPE
Sbjct: 210 DVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTET-------HMAPEV 262
Query: 347 GREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLK 386
DV+S M++ G P + F G + LK
Sbjct: 263 VLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLK 302
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 87/201 (43%), Gaps = 14/201 (6%)
Query: 180 LIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDV--ECEMMKSIRHRNLIKVIS 236
++G+G FG V K + E AVKV N + + E E++K + H N++K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 237 TCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIH 296
+ +V E G L + + I+ V S + Y+H I+H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-HDAARIIKQVFSGITYMH---KHNIVH 144
Query: 297 CDLKPSNVLLDD---NMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS 353
DLKP N+LL+ + + DF ++ T Q+ + T Y+APE R G
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLS---TCFQQNTKMKDRIGTAYYIAPEVLR-GTYD 200
Query: 354 TNGDVYSFGIMLMETFTGKKP 374
DV+S G++L +G P
Sbjct: 201 EKCDVWSAGVILYILLSGTPP 221
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 39/239 (16%)
Query: 181 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQ----CGRALKGFDVECEMMKSIRHRNLIKV 234
+G G +G V A R+ + VAVK+ +++ C +K E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 69
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRL--NIMIDVASALEYLH----- 287
+ L LEY G L F R+ +I + A + H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 288 --FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
+ + I H D+KP N+LLD+ +SDF +A + ++ + T+ Y+APE
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 346 YGREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW------VNDWLPIST 397
+ DV+S GI+L G+ P ++ + W +N W I +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 39/239 (16%)
Query: 181 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQ----CGRALKGFDVECEMMKSIRHRNLIKV 234
+G G +G V A R+ + VAVK+ +++ C +K E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 69
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRL--NIMIDVASALEYLH----- 287
+ L LEY G L F R+ +I + A + H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 288 --FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
+ + I H D+KP N+LLD+ +SDF +A + ++ + T+ Y+APE
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 346 YGREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW------VNDWLPIST 397
+ DV+S GI+L G+ P ++ + W +N W I +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 28/219 (12%)
Query: 181 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRA-LKGFDVECEMMKSIRHR-NLI 232
+GRG FG V +A + VAVK+ + + E +++ I H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 233 KVISTCSNEEFKALVL-EYMPHGSLEKYMYSSNY-----------ILDIFQRLNIMI--- 277
++ C+ +V+ E+ G+L Y+ S + F L +I
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 278 -DVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 336
VA +E+L S IH DL N+LL + V + DF +A+ + + + +
Sbjct: 157 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 337 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 374
+ +MAPE + + DV+SFG++L E F+ G P
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 252
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 39/239 (16%)
Query: 181 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQ----CGRALKGFDVECEMMKSIRHRNLIKV 234
+G G +G V A R+ + VAVK+ +++ C +K E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 70
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRL--NIMIDVASALEYLH----- 287
+ L LEY G L F R+ +I + A + H
Sbjct: 71 YGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 288 --FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
+ + I H D+KP N+LLD+ +SDF +A + ++ + T+ Y+APE
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 346 YGREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW------VNDWLPIST 397
+ DV+S GI+L G+ P ++ + W +N W I +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 236
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIS- 236
+G G +GSV + + G+++AVK + Q K E ++K ++H N+I ++
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 237 ---TCSNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 119 FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 173
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 174 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 228
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 229 YNMTVDIWSVGCIMAELLTGR 249
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 17/213 (7%)
Query: 172 TDGFSENNLIGRGGFGSVY--KARLGDGMEVAVKVFNLQCGRALKGFDV---ECEMMKSI 226
+D + ++G+G FG V K ++ G E AVKV + + + + E +++K +
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
H N++K+ ++ + LV E G L + S ++ I+ V S + Y+
Sbjct: 90 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 148
Query: 287 HFGYSAPIIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
H I+H DLKP N+LL+ + + DF ++ T + S + T Y+A
Sbjct: 149 H---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKIGTAYYIA 202
Query: 344 PEYGREGRVSTNGDVYSFGIMLMETFTGKKPTN 376
PE G DV+S G++L +G P N
Sbjct: 203 PEV-LHGTYDEKCDVWSTGVILYILLSGCPPFN 234
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 93/220 (42%), Gaps = 32/220 (14%)
Query: 181 IGRGGFGSVYKARLGD---GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+GRG FG V+ R+ D G + AVK L+ RA + + C + S R ++ +
Sbjct: 82 LGRGSFGEVH--RMEDKQTGFQCAVKKVRLEVFRAEE--LMACAGLTSPR---IVPLYGA 134
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHC 297
+ + +E + GSL + + L + L + LEYLH S I+H
Sbjct: 135 VREGPWVNIFMELLEGGSLGQ-LVKEQGCLPEDRALYYLGQALEGLEYLH---SRRILHG 190
Query: 298 DLKPSNVLL-DDNMVAHLSDFSIA----------KLLTGEDQSMTQTQTLATIGYMAPEY 346
D+K NVLL D A L DF A LLTG+ T+T +MAPE
Sbjct: 191 DVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTET-------HMAPEV 243
Query: 347 GREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLK 386
DV+S M++ G P + F G + LK
Sbjct: 244 VLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLK 283
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+ G + ++ + R + EYLH
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 145
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D+ ++DF AK + G + T Y+APE
Sbjct: 146 --SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 198
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 199 SKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+ G + ++ + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+ G + ++ + R + EYLH
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 153
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 154 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 206
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 207 SKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 22/212 (10%)
Query: 172 TDGFSENNLIGRGGFGS----VYKARLGDGMEVAVKVFNLQCGRALKGFDVECE-MMKSI 226
+DG+ IG G + V+KA ME AVKV + ++ + E E +++
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKAT---NMEYAVKVID----KSKRDPSEEIEILLRYG 78
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
+H N+I + + + LV E M G L + + + ++ + +EYL
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-VLHTIGKTVEYL 137
Query: 287 HFGYSAPIIHCDLKPSNVLLDDNM----VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
H S ++H DLKPSN+L D + DF AK L E+ + T ++
Sbjct: 138 H---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL--MTPCYTANFV 192
Query: 343 APEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
APE + D++S GI+L G P
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 181 IGRGGFGSVYKARL-GDGMEVAVKVFNL-QCGRALKGFDV-ECEMMKSIRHRNLIKVIST 237
IG G +G K R DG + K + A K V E +++ ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 238 CSNEEFKAL--VLEYMPHGSLE----KYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ L V+EY G L K Y+ + F L +M + AL+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV-LRVMTQLTLALKECHRRSD 132
Query: 292 A--PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE 349
++H DLKP+NV LD L DF +A++L D S +T + T YM+PE
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDTSFAKT-FVGTPYYMSPEQMNR 190
Query: 350 GRVSTNGDVYSFGIMLME 367
+ D++S G +L E
Sbjct: 191 MSYNEKSDIWSLGCLLYE 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 39/239 (16%)
Query: 181 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQ----CGRALKGFDVECEMMKSIRHRNLIKV 234
+G G +G V A R+ + VAVK+ +++ C +K E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 70
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRL--NIMIDVASALEYLH----- 287
+ L LEY G L F R+ +I + A + H
Sbjct: 71 YGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 288 --FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
+ + I H D+KP N+LLD+ +SDF +A + ++ + T+ Y+APE
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 346 YGREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW------VNDWLPIST 397
+ DV+S GI+L G+ P ++ + W +N W I +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 236
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 39/239 (16%)
Query: 181 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQ----CGRALKGFDVECEMMKSIRHRNLIKV 234
+G G +G V A R+ + VAVK+ +++ C +K E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 70
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRL--NIMIDVASALEYLH----- 287
+ L LEY G L F R+ +I + A + H
Sbjct: 71 YGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 288 --FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
+ + I H D+KP N+LLD+ +SDF +A + ++ + T+ Y+APE
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 346 YGREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW------VNDWLPIST 397
+ DV+S GI+L G+ P ++ + W +N W I +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 236
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 39/239 (16%)
Query: 181 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQ----CGRALKGFDVECEMMKSIRHRNLIKV 234
+G G +G V A R+ + VAVK+ +++ C +K E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 70
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRL--NIMIDVASALEYLH----- 287
+ L LEY G L F R+ +I + A + H
Sbjct: 71 YGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 288 --FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
+ + I H D+KP N+LLD+ +SDF +A + ++ + T+ Y+APE
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 346 YGREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW------VNDWLPIST 397
+ DV+S GI+L G+ P ++ + W +N W I +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 236
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+ G + ++ + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 39/239 (16%)
Query: 181 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQ----CGRALKGFDVECEMMKSIRHRNLIKV 234
+G G +G V A R+ + VAVK+ +++ C +K E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 69
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRL--NIMIDVASALEYLH----- 287
+ L LEY G L F R+ +I + A + H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 288 --FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
+ + I H D+KP N+LLD+ +SDF +A + ++ + T+ Y+APE
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 346 YGREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW------VNDWLPIST 397
+ DV+S GI+L G+ P ++ + W +N W I +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 15/207 (7%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+ G + ++ + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYG 347
S +I+ DLKP N+L+D ++DF AK + G +T LA T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLAGTPEYLAPEII 210
Query: 348 REGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L K+ + + +V+EY P G + ++ + R + EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+++D ++DF AK + G + T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 15/207 (7%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+ G + ++ + R + EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 179
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL-ATIGYMAPEYG 347
S +I+ DLKP N+L+D ++DF AK + G T TL T Y+APE
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------ATWTLCGTPEYLAPEII 231
Query: 348 REGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 232 LSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L K+ + + +V+EY P G + ++ + R + EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+++D ++DF AK + G + T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 39/239 (16%)
Query: 181 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQ----CGRALKGFDVECEMMKSIRHRNLIKV 234
+G G +G V A R+ + VAVK+ +++ C +K E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 70
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRL--NIMIDVASALEYLH----- 287
+ L LEY G L F R+ +I + A + H
Sbjct: 71 YGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 288 --FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
+ + I H D+KP N+LLD+ +SDF +A + ++ + T+ Y+APE
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 346 YGREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW------VNDWLPIST 397
+ DV+S GI+L G+ P ++ + W +N W I +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 236
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+ G + ++ + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G VAVK + Q K E ++K ++H N+I ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + + D Q L + + L+Y+H SA
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFL--IYQILRGLKYIH---SA 140
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 195
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 196 YNQTVDIWSVGCIMAELLTGR 216
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+ G + ++ + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+ G + ++ + R + EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 179
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 232
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 11/176 (6%)
Query: 219 ECEMMKSIRHRNLIKVISTCSNEEFKAL--VLEYMPHGSLEKYMYSSNYILDIFQRLNIM 276
E ++++ +RH+N+I+++ NEE + + V+EY G E + Q
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF 115
Query: 277 IDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 336
+ LEYLH S I+H D+KP N+LL +S +A+ L T +
Sbjct: 116 CQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ 172
Query: 337 ATIGYMAPEY--GREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVN 390
+ + PE G + D++S G+ L TG P F G+ K + N
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP----FEGDNIYKLFEN 224
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 48/227 (21%)
Query: 172 TDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVK--------VFNLQCGRALKGFDVECEM 222
+ F +L+G G +G V A G VA+K +F L+ R +K +
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIK-------I 62
Query: 223 MKSIRHRNLIKVISTCSNEEFK-----ALVLEYMP---HGSLEKYMYSSNYI-LDIFQRL 273
+K +H N+I + + + F+ ++ E M H + M S ++I I+Q L
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL 122
Query: 274 NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL---------- 323
A++ LH + +IH DLKPSN+L++ N + DF +A+++
Sbjct: 123 R-------AVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 324 TGEDQSMTQTQTLATIGYMAPEYG-REGRVSTNGDVYSFGIMLMETF 369
TG+ M + +AT Y APE + S DV+S G +L E F
Sbjct: 173 TGQQSGM--VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 125/281 (44%), Gaps = 39/281 (13%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCG--RALKGFDVECEMMKSIRHRN--LIKVIS 236
IG GG V++ A+K NL+ + L + E + ++ + +I++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 237 TCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIH 296
+++ +V+E + L ++ I D ++R + ++ LE +H + I+H
Sbjct: 124 YEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWERKSYWKNM---LEAVHTIHQHGIVH 178
Query: 297 CDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-TN 355
DLKP+N L+ D M+ L DF IA + + S+ + + + YM PE ++ S N
Sbjct: 179 SDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSREN 237
Query: 356 G----------DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405
G DV+S G +L GK P +I N +++ H + D P +E
Sbjct: 238 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLHAIID--PNHEIEFPD--- 291
Query: 406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVA 446
+ ++D+ V K C C P+QRI+ E++A
Sbjct: 292 IPEKDLQDVLK--C----------CLKRDPKQRISIPELLA 320
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 118/267 (44%), Gaps = 28/267 (10%)
Query: 181 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
IG G G V A + G VAVK +L+ + + E +M+ +H N++++ ++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
+ +V+E++ G+L + + ++ Q + + V AL LH + +IH D+
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 151
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVY 359
K ++LL + LSDF ++ E + + T +MAPE D++
Sbjct: 152 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIW 209
Query: 360 SFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ-EDIHFVAKEQ 418
S GIM++E G+ P FN P+ M+++ NL + +++H V+
Sbjct: 210 SLGIMVIEMVDGEPP---YFNEP-----------PLKAMKMIRDNLPPRLKNLHKVS--- 252
Query: 419 CVSCVFNLAMECTVESPEQRINAREIV 445
+ V P QR A E++
Sbjct: 253 --PSLKGFLDRLLVRDPAQRATAAELL 277
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G VAVK + Q K E ++K ++H N+I ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 140
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 195
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 196 YNQTVDIWSVGCIMAELLTGR 216
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 87/201 (43%), Gaps = 14/201 (6%)
Query: 180 LIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDV--ECEMMKSIRHRNLIKVIS 236
++G+G FG V K + E AVKV N + + E E++K + H N++K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 237 TCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIH 296
+ +V E G L + + I+ V S + Y+H I+H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-HDAARIIKQVFSGITYMH---KHNIVH 144
Query: 297 CDLKPSNVLLDD---NMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS 353
DLKP N+LL+ + + DF ++ T Q+ + T Y+APE R G
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLS---TCFQQNTKMKDRIGTAYYIAPEVLR-GTYD 200
Query: 354 TNGDVYSFGIMLMETFTGKKP 374
DV+S G++L +G P
Sbjct: 201 EKCDVWSAGVILYILLSGTPP 221
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+ G + ++ + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + D+ +A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+ G + ++ + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLX-----GTPEYLAPEIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 118/267 (44%), Gaps = 28/267 (10%)
Query: 181 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
IG G G V A + G VAVK +L+ + + E +M+ +H N++++ ++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
+ +V+E++ G+L + + ++ Q + + V AL LH + +IH D+
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 153
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVY 359
K ++LL + LSDF ++ E + + T +MAPE D++
Sbjct: 154 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIW 211
Query: 360 SFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ-EDIHFVAKEQ 418
S GIM++E G+ P FN P+ M+++ NL + +++H V+
Sbjct: 212 SLGIMVIEMVDGEPP---YFNEP-----------PLKAMKMIRDNLPPRLKNLHKVS--- 254
Query: 419 CVSCVFNLAMECTVESPEQRINAREIV 445
+ V P QR A E++
Sbjct: 255 --PSLKGFLDRLLVRDPAQRATAAELL 279
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G VAVK + Q K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 97/225 (43%), Gaps = 19/225 (8%)
Query: 181 IGRGGFG-SVYKARLGDGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRHRNLIKVIST 237
IG G FG ++ DG + +K N+ + + E ++ +++H N+++ +
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 238 CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQR---LNIMIDVASALEYLHFGYSAPI 294
+V++Y G L K + + +L FQ L+ + + AL+++H I
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVL--FQEDQILDWFVQICLALKHVH---DRKI 146
Query: 295 IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIG---YMAPEYGREGR 351
+H D+K N+ L + L DF IA++L T A IG Y++PE
Sbjct: 147 LHRDIKSQNIFLTKDGTVQLGDFGIARVLNS-----TVELARACIGTPYYLSPEICENKP 201
Query: 352 VSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPIS 396
+ D+++ G +L E T K + LK + P+S
Sbjct: 202 YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVS 246
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G VAVK + Q K E ++K ++H N+I ++
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 154
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 155 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 209
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 210 YNQTVDIWSVGCIMAELLTGR 230
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 118/267 (44%), Gaps = 28/267 (10%)
Query: 181 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
IG G G V A + G VAVK +L+ + + E +M+ +H N++++ ++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
+ +V+E++ G+L + + ++ Q + + V AL LH + +IH D+
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 142
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVY 359
K ++LL + LSDF ++ E + + T +MAPE D++
Sbjct: 143 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIW 200
Query: 360 SFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ-EDIHFVAKEQ 418
S GIM++E G+ P FN P+ M+++ NL + +++H V+
Sbjct: 201 SLGIMVIEMVDGEPP---YFNEP-----------PLKAMKMIRDNLPPRLKNLHKVS--- 243
Query: 419 CVSCVFNLAMECTVESPEQRINAREIV 445
+ V P QR A E++
Sbjct: 244 --PSLKGFLDRLLVRDPAQRATAAELL 268
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 109/244 (44%), Gaps = 31/244 (12%)
Query: 148 PSNDANMPSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFN 206
PS D PS ++L+ + TD F+ ++G+G FG V A R G A+K+
Sbjct: 2 PSEDRKQPS-------NNLDRVKLTD-FNFLMVLGKGSFGKVMLADRKGTEELYAIKI-- 51
Query: 207 LQCGRALKGFDVECEMMKS------IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYM 260
L+ ++ DVEC M++ + L ++ S + V+EY+ G L M
Sbjct: 52 LKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL---M 108
Query: 261 YSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIA 320
Y + F+ + A L F + II+ DLK NV+LD ++DF +
Sbjct: 109 YHIQQV-GKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMC 167
Query: 321 K--LLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEI 378
K ++ G +T + T Y+APE + D +++G++L E G+ P
Sbjct: 168 KEHMMDG----VTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPP---- 219
Query: 379 FNGE 382
F+GE
Sbjct: 220 FDGE 223
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 118/267 (44%), Gaps = 28/267 (10%)
Query: 181 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
IG G G V A + G VAVK +L+ + + E +M+ +H N++++ ++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
+ +V+E++ G+L + + ++ Q + + V AL LH + +IH D+
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 146
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVY 359
K ++LL + LSDF ++ E + + T +MAPE D++
Sbjct: 147 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIW 204
Query: 360 SFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ-EDIHFVAKEQ 418
S GIM++E G+ P FN P+ M+++ NL + +++H V+
Sbjct: 205 SLGIMVIEMVDGEPP---YFNEP-----------PLKAMKMIRDNLPPRLKNLHKVS--- 247
Query: 419 CVSCVFNLAMECTVESPEQRINAREIV 445
+ V P QR A E++
Sbjct: 248 --PSLKGFLDRLLVRDPAQRATAAELL 272
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G VAVK + Q K E ++K ++H N+I ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 150
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 205
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 206 YNQTVDIWSVGCIMAELLTGR 226
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+ G + ++ + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+ G + ++ + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G VAVK + Q K E ++K ++H N+I ++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 164
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 219
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 220 YNQTVDIWSVGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G VAVK + Q K E ++K ++H N+I ++
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 163
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 164 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 218
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 219 YNQTVDIWSVGCIMAELLTGR 239
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 118/267 (44%), Gaps = 28/267 (10%)
Query: 181 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
IG G G V A + G VAVK +L+ + + E +M+ +H N++++ ++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
+ +V+E++ G+L + + ++ Q + + V AL LH + +IH D+
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 196
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVY 359
K ++LL + LSDF ++ E + + T +MAPE D++
Sbjct: 197 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIW 254
Query: 360 SFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ-EDIHFVAKEQ 418
S GIM++E G+ P FN P+ M+++ NL + +++H V+
Sbjct: 255 SLGIMVIEMVDGEPP---YFNEP-----------PLKAMKMIRDNLPPRLKNLHKVS--- 297
Query: 419 CVSCVFNLAMECTVESPEQRINAREIV 445
+ V P QR A E++
Sbjct: 298 --PSLKGFLDRLLVRDPAQRATAAELL 322
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 92/212 (43%), Gaps = 23/212 (10%)
Query: 172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRN 230
+D F + +GRG VY+ + G A+KV + + E ++ + H N
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKI--VRTEIGVLLRLSHPN 109
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSL-----EKYMYSSNYILDIFQRLNIMIDVASALEY 285
+IK+ +LVLE + G L EK YS D ++ + A+ Y
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQ------ILEAVAY 163
Query: 286 LHFGYSAPIIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
LH I+H DLKP N+L + ++DF ++K++ E Q + +T T GY
Sbjct: 164 LH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV--EHQVLMKT-VCGTPGYC 217
Query: 343 APEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
APE R D++S GI+ G +P
Sbjct: 218 APEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+ G + ++ + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+ G + ++ + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+ G + ++ + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 172 TDGFSENNLIGRGGFGSVY--KARLGDGMEVAVKVFNLQCGRALKGFDV---ECEMMKSI 226
+D + ++G+G FG V K ++ G E AVKV + + + + E +++K +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
H N++K+ ++ + LV E G L + S ++ I+ V S + Y+
Sbjct: 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 142
Query: 287 HFGYSAPIIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
H I+H DLKP N+LL+ + + DF ++ T + S + T Y+A
Sbjct: 143 H---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKIGTAYYIA 196
Query: 344 PEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNG 381
PE G DV+S G++L +G P FNG
Sbjct: 197 PEV-LHGTYDEKCDVWSTGVILYILLSGCPP----FNG 229
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+ G + ++ + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G VAVK + Q K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 41/212 (19%)
Query: 181 IGRGGFGSV---YKARLGDGMEVAVKVFN------LQCGRALKGFDVECEMMKSIRHRNL 231
+G G +GSV Y ARL +VAVK + + R + E ++K ++H N+
Sbjct: 28 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYR----ELRLLKHLKHENV 81
Query: 232 IKVIS----TCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLH 287
I ++ S E+F + L G+ + + D + ++ + L+Y+H
Sbjct: 82 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-LVYQLLRGLKYIH 140
Query: 288 FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYG 347
SA IIH DLKPSNV ++++ + DF +A+ D+ MT GY+A +
Sbjct: 141 ---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR---QADEEMT--------GYVATRWY 186
Query: 348 REGRVSTNG-------DVYSFGIMLMETFTGK 372
R + N D++S G ++ E GK
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 41/212 (19%)
Query: 181 IGRGGFGSV---YKARLGDGMEVAVKVFN------LQCGRALKGFDVECEMMKSIRHRNL 231
+G G +GSV Y ARL +VAVK + + R + E ++K ++H N+
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYR----ELRLLKHLKHENV 89
Query: 232 IKVIS----TCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLH 287
I ++ S E+F + L G+ + + D + ++ + L+Y+H
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-LVYQLLRGLKYIH 148
Query: 288 FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYG 347
SA IIH DLKPSNV ++++ + DF +A+ D+ MT GY+A +
Sbjct: 149 ---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEMT--------GYVATRWY 194
Query: 348 REGRVSTNG-------DVYSFGIMLMETFTGK 372
R + N D++S G ++ E GK
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 19/220 (8%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDV--ECEMMKSIRHRNLIKVISTC 238
+G G FG V++ V V F + L + V E +M + H LI +
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKF-INTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 117
Query: 239 SNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCD 298
++ L+LE++ G L + + +Y + + +N M L+++H I+H D
Sbjct: 118 EDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLD 174
Query: 299 LKPSNVLLDDNMVAHLS--DFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG 356
+KP N++ + + + DF +A L ++ T AT + APE V
Sbjct: 175 IKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV---TTATAEFAAPEIVDREPVGFYT 231
Query: 357 DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVN----DW 392
D+++ G++ +G P F GE L+ N DW
Sbjct: 232 DMWAIGVLGYVLLSGLSP----FAGEDDLETLQNVKRCDW 267
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 118/267 (44%), Gaps = 28/267 (10%)
Query: 181 IGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
IG G G V A + G VAVK +L+ + + E +M+ +H N++++ ++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
+ +V+E++ G+L + + ++ Q + + V AL LH + +IH D+
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 273
Query: 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVY 359
K ++LL + LSDF ++ E + + T +MAPE D++
Sbjct: 274 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIW 331
Query: 360 SFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ-EDIHFVAKEQ 418
S GIM++E G+ P FN P+ M+++ NL + +++H V+
Sbjct: 332 SLGIMVIEMVDGEPP---YFNEP-----------PLKAMKMIRDNLPPRLKNLHKVS--- 374
Query: 419 CVSCVFNLAMECTVESPEQRINAREIV 445
+ V P QR A E++
Sbjct: 375 --PSLKGFLDRLLVRDPAQRATAAELL 399
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 105/241 (43%), Gaps = 27/241 (11%)
Query: 153 NMPSIATWRTFSHLELCRATDG---FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ 208
+M S + R+ ++L D F L+G G +G VYK R + G A+KV ++
Sbjct: 1 SMASDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDV- 59
Query: 209 CGRALKGFDVECEMMKSI-RHRNL-------IKVISTCSNEEFKALVLEYMPHGSLEKYM 260
G + E M+K HRN+ IK +++ LV+E+ GS+ +
Sbjct: 60 TGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL-WLVMEFCGAGSVTDLI 118
Query: 261 YSSN-YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSI 319
++ L I ++ L +LH +IH D+K NVLL +N L DF +
Sbjct: 119 KNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGV 175
Query: 320 AKLLTGEDQSMTQTQT-LATIGYMAPEY-----GREGRVSTNGDVYSFGIMLMETFTGKK 373
+ L D+++ + T + T +MAPE + D++S GI +E G
Sbjct: 176 SAQL---DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAP 232
Query: 374 P 374
P
Sbjct: 233 P 233
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 91/218 (41%), Gaps = 28/218 (12%)
Query: 181 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+GRG FG V++ + G + AVK L+ R + V C + S R ++ +
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEE--LVACAGLSSPR---IVPLYGAVR 120
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
+ + +E + GSL + + + + + ALE L + ++ I+H D+
Sbjct: 121 EGPWVNIFMELLEGGSLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 176
Query: 300 KPSNVLL-DDNMVAHLSDFSIA----------KLLTGEDQSMTQTQTLATIGYMAPEYGR 348
K NVLL D A L DF A LLTG+ T+T +MAPE
Sbjct: 177 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET-------HMAPEVVM 229
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLK 386
D++S M++ G P + F G + LK
Sbjct: 230 GKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 267
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 181 IGRGGFGSVYKARL-GDGMEVAVKVFNL-QCGRALKGFDV-ECEMMKSIRHRNLIKVIST 237
IG G +G K R DG + K + A K V E +++ ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 238 CSNEEFKAL--VLEYMPHGSLE----KYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ L V+EY G L K Y+ + F L +M + AL+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV-LRVMTQLTLALKECHRRSD 132
Query: 292 A--PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE 349
++H DLKP+NV LD L DF +A++L D+ + + + T YM+PE
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN-HDEDFAK-EFVGTPYYMSPEQMNR 190
Query: 350 GRVSTNGDVYSFGIMLME 367
+ D++S G +L E
Sbjct: 191 MSYNEKSDIWSLGCLLYE 208
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 172 TDGFSENNLIGRGGFGSVY--KARLGDGMEVAVKVFNLQCGRALKGFDV---ECEMMKSI 226
+D + ++G+G FG V K ++ G E AVKV + + + + E +++K +
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
H N++K+ ++ + LV E G L + S ++ I+ V S + Y+
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 166
Query: 287 HFGYSAPIIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
H I+H DLKP N+LL+ + + DF ++ T + S + T Y+A
Sbjct: 167 H---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKIGTAYYIA 220
Query: 344 PEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNG 381
PE G DV+S G++L +G P FNG
Sbjct: 221 PEV-LHGTYDEKCDVWSTGVILYILLSGCPP----FNG 253
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 167
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E +AT Y APE
Sbjct: 168 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MXGYVATRWYRAPEIMLNWMH 222
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 223 YNQTVDIWSVGCIMAELLTGR 243
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 296 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ-TQTLATIGYMAPEYGREGRVST 354
H D+KP N+L+ + A+L DF IA T D+ +TQ T+ T+ Y APE E +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATT--DEKLTQLGNTVGTLYYXAPERFSESHATY 214
Query: 355 NGDVYSFGIMLMETFTGKKP 374
D+Y+ +L E TG P
Sbjct: 215 RADIYALTCVLYECLTGSPP 234
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 11/200 (5%)
Query: 180 LIGRGGFGSVYKARLGDGMEV-AVKVFNLQCGRALKGFD-VECE---MMKSIRHRNLIKV 234
+IGRG + V RL + A+KV + + D V+ E ++ H L+ +
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 71
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPI 294
S E V+EY+ G L +M + + R +++ AL YLH I
Sbjct: 72 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGI 127
Query: 295 IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVST 354
I+ DLK NVLLD L+D+ + K G T + T Y+APE R
Sbjct: 128 IYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDYGF 185
Query: 355 NGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G+ P
Sbjct: 186 SVDWWALGVLMFEMMAGRSP 205
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 172 TDGFSENNLIGRGGFGSVY--KARLGDGMEVAVKVFNLQCGRALKGFDV---ECEMMKSI 226
+D + ++G+G FG V K ++ G E AVKV + + + + E +++K +
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
H N++K+ ++ + LV E G L + S ++ I+ V S + Y+
Sbjct: 107 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 165
Query: 287 HFGYSAPIIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
H I+H DLKP N+LL+ + + DF ++ T + S + T Y+A
Sbjct: 166 H---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKIGTAYYIA 219
Query: 344 PEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNG 381
PE G DV+S G++L +G P FNG
Sbjct: 220 PEV-LHGTYDEKCDVWSTGVILYILLSGCPP----FNG 252
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 91/218 (41%), Gaps = 28/218 (12%)
Query: 181 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+GRG FG V++ + G + AVK L+ R + V C + S R ++ +
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEE--LVACAGLSSPR---IVPLYGAVR 136
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
+ + +E + GSL + + + + + ALE L + ++ I+H D+
Sbjct: 137 EGPWVNIFMELLEGGSLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 192
Query: 300 KPSNVLL-DDNMVAHLSDFSIA----------KLLTGEDQSMTQTQTLATIGYMAPEYGR 348
K NVLL D A L DF A LLTG+ T+T +MAPE
Sbjct: 193 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET-------HMAPEVVM 245
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLK 386
D++S M++ G P + F G + LK
Sbjct: 246 GKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 283
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 97/239 (40%), Gaps = 39/239 (16%)
Query: 181 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQ----CGRALKGFDVECEMMKSIRHRNLIKV 234
+G G G V A R+ + VAVK+ +++ C +K E + K + H N++K
Sbjct: 14 LGEGAAGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 69
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRL--NIMIDVASALEYLH----- 287
+ L LEY G L F R+ +I + A + H
Sbjct: 70 YGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 288 --FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
+ + I H D+KP N+LLD+ +SDF +A + ++ + T+ Y+APE
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 346 YGREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW------VNDWLPIST 397
+ DV+S GI+L G+ P ++ + W +N W I +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 11/200 (5%)
Query: 180 LIGRGGFGSVYKARLGDGMEV-AVKVFNLQCGRALKGFD-VECE---MMKSIRHRNLIKV 234
+IGRG + V RL + A+KV + + D V+ E ++ H L+ +
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 86
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPI 294
S E V+EY+ G L +M + + R +++ AL YLH I
Sbjct: 87 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGI 142
Query: 295 IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVST 354
I+ DLK NVLLD L+D+ + K G T + T Y+APE R
Sbjct: 143 IYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDYGF 200
Query: 355 NGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G+ P
Sbjct: 201 SVDWWALGVLMFEMMAGRSP 220
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 94/220 (42%), Gaps = 25/220 (11%)
Query: 181 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+G GGF V L DG A+K + + E +M + H N++++++ C
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCL 96
Query: 240 NEEFKA----LVLEYMPHGSL----EKYMYSSNYILDIFQRLNIMIDVASALEYLHF-GY 290
E L+L + G+L E+ N++ + Q L +++ + LE +H GY
Sbjct: 97 RERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTED-QILWLLLGICRGLEAIHAKGY 155
Query: 291 SAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKL----LTGEDQSMTQTQTLA---TIGYMA 343
+ H DLKP+N+LL D L D + G Q++T A TI Y A
Sbjct: 156 A----HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRA 211
Query: 344 PE---YGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFN 380
PE + DV+S G +L G+ P + +F
Sbjct: 212 PELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ 251
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 11/202 (5%)
Query: 180 LIGRGGFGSVYKARLGDGMEV-AVKVFNLQCGRALKGFD-VECE---MMKSIRHRNLIKV 234
+IGRG + V RL + A+KV + + D V+ E ++ H L+ +
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 75
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPI 294
S E V+EY+ G L +M + + R +++ AL YLH I
Sbjct: 76 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGI 131
Query: 295 IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVST 354
I+ DLK NVLLD L+D+ + K G T + T Y+APE R
Sbjct: 132 IYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDYGF 189
Query: 355 NGDVYSFGIMLMETFTGKKPTN 376
+ D ++ G+++ E G+ P +
Sbjct: 190 SVDWWALGVLMFEMMAGRSPFD 211
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 14/198 (7%)
Query: 181 IGRGGFGSVYKARL-GDGMEVAVKVFNL-QCGRALKGFDV-ECEMMKSIRHRNLIKVIST 237
IG G +G K R DG + K + A K V E +++ ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 238 CSNEEFKAL--VLEYMPHGSLE----KYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ L V+EY G L K Y+ + F L +M + AL+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV-LRVMTQLTLALKECHRRSD 132
Query: 292 A--PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE 349
++H DLKP+NV LD L DF +A++L D S + + T YM+PE
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN-HDTSFAKA-FVGTPYYMSPEQMNR 190
Query: 350 GRVSTNGDVYSFGIMLME 367
+ D++S G +L E
Sbjct: 191 MSYNEKSDIWSLGCLLYE 208
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 35/242 (14%)
Query: 179 NLIGRGGFGSVYKA-RLGDGMEVAVKV-----FNLQCGRALKGFDVECEMMKSIRHRNLI 232
+IG+G F V + G + AVK+ F G + + E + ++H +++
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 233 KVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASA---------L 283
+++ T S++ +V E+M L +I +R + + A L
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADL---------CFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 284 EYLHFGYSAPIIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIG 340
E L + + IIH D+KP NVLL +++ L DF +A L + + + T
Sbjct: 141 EALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG--ESGLVAGGRVGTPH 198
Query: 341 YMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP----TNEIFNGEMTLKHWVN--DWLP 394
+MAPE + DV+ G++L +G P +F G + K+ +N W
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSH 258
Query: 395 IS 396
IS
Sbjct: 259 IS 260
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 97/239 (40%), Gaps = 39/239 (16%)
Query: 181 IGRGGFGSVYKA--RLGDGMEVAVKVFNLQ----CGRALKGFDVECEMMKSIRHRNLIKV 234
+G G +G V A R+ + VAVK+ +++ C +K E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKK---EICINAMLNHENVVKF 70
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRL--NIMIDVASALEYLH----- 287
+ L LEY G L F R+ +I + A + H
Sbjct: 71 YGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 288 --FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
+ + I H D+KP N+LLD+ +SDF +A + ++ + T+ Y+APE
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 346 YGREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW------VNDWLPIST 397
+ DV+S GI+L G+ P ++ + W +N W I +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 236
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+ G + ++ + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ + G P
Sbjct: 212 SKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 37/257 (14%)
Query: 181 IGRGGFGSVYKAR-LGDGMEVAVK-----VFNLQCGRALKGFDVECEMMKSIRHRNLIKV 234
+GRG +G V K R + G +AVK V + + R L D+ M+++ +
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS---MRTVDCPFTVTF 115
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRL------NIMIDVASALEYLHF 288
E + +E M SL+K+ ++D Q + I + + ALE+LH
Sbjct: 116 YGALFREGDVWICMELM-DTSLDKFY---KQVIDKGQTIPEDILGKIAVSIVKALEHLHS 171
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA----- 343
S +IH D+KPSNVL++ + DF I+ L S+ +T YMA
Sbjct: 172 KLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLV---DSVAKTIDAGCKPYMAPERIN 226
Query: 344 PEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGA 403
PE ++G S D++S GI ++E + P + LK V + P + A
Sbjct: 227 PELNQKG-YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP-----QLPA 280
Query: 404 NLLSQEDIHFVAKEQCV 420
+ S E + F + QC+
Sbjct: 281 DKFSAEFVDFTS--QCL 295
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 28/222 (12%)
Query: 168 LCRATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV----ECEM 222
C + + IG+G FG V+KAR G +VA+K ++ + +GF + E ++
Sbjct: 13 FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKI 70
Query: 223 MKSIRHRNLIKVISTCSNE-----EFKA---LVLEYMPH---GSLEKYMYSSNYILDIFQ 271
++ ++H N++ +I C + KA LV ++ H G L + + L +
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK--FTLSEIK 128
Query: 272 RLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKL--LTGEDQS 329
R+ M+ L L++ + I+H D+K +NVL+ + V L+DF +A+ L Q
Sbjct: 129 RVMQML-----LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 183
Query: 330 MTQTQTLATIGYMAPEYGR-EGRVSTNGDVYSFGIMLMETFT 370
+ T+ Y PE E D++ G ++ E +T
Sbjct: 184 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 22/212 (10%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCGRALKG-FDVECEMMKSIRHRN 230
D + +++G G F V A + VA+K + +G + E ++ I+H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSL-----EKYMYSSNYILDIFQRLNIMIDVASALEY 285
++ + + L+++ + G L EK Y+ ++ V A++Y
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER------DASRLIFQVLDAVKY 131
Query: 286 LHFGYSAPIIHCDLKPSNVL---LDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
LH I+H DLKP N+L LD++ +SDF ++K+ ED + T GY+
Sbjct: 132 LH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYV 185
Query: 343 APEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
APE + S D +S G++ G P
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 32/235 (13%)
Query: 154 MPSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--GR 211
MP + E R D + +++G G F V A + K+ ++C +
Sbjct: 1 MPGAVEGPRWKQAEDIR--DIYDFRDVLGTGAFSEVILAE----DKRTQKLVAIKCIAKK 54
Query: 212 ALKG----FDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL-----EKYMYS 262
AL+G + E ++ I+H N++ + + L+++ + G L EK Y+
Sbjct: 55 ALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT 114
Query: 263 SNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVL---LDDNMVAHLSDFSI 319
++ V A++YLH I+H DLKP N+L LD++ +SDF +
Sbjct: 115 ER------DASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGL 165
Query: 320 AKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
+K+ ED + T GY+APE + S D +S G++ G P
Sbjct: 166 SKM---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 22/212 (10%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCGRALKG-FDVECEMMKSIRHRN 230
D + +++G G F V A + VA+K + +G + E ++ I+H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSL-----EKYMYSSNYILDIFQRLNIMIDVASALEY 285
++ + + L+++ + G L EK Y+ ++ V A++Y
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER------DASRLIFQVLDAVKY 131
Query: 286 LHFGYSAPIIHCDLKPSNVL---LDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
LH I+H DLKP N+L LD++ +SDF ++K+ ED + T GY+
Sbjct: 132 LH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYV 185
Query: 343 APEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
APE + S D +S G++ G P
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 91/218 (41%), Gaps = 28/218 (12%)
Query: 181 IGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS 239
+GRG FG V++ + G + AVK L+ R + V C + S R ++ +
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEE--LVACAGLSSPR---IVPLYGAVR 134
Query: 240 NEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299
+ + +E + GSL + + + + + ALE L + ++ I+H D+
Sbjct: 135 EGPWVNIFMELLEGGSLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 190
Query: 300 KPSNVLL-DDNMVAHLSDFSIA----------KLLTGEDQSMTQTQTLATIGYMAPEYGR 348
K NVLL D A L DF A LLTG+ T+T +MAPE
Sbjct: 191 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET-------HMAPEVVM 243
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLK 386
D++S M++ G P + F G + LK
Sbjct: 244 GKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 281
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+ G + ++ + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+++D ++DF AK + G + T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIII 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 22/212 (10%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCGRALKG-FDVECEMMKSIRHRN 230
D + +++G G F V A + VA+K + +G + E ++ I+H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSL-----EKYMYSSNYILDIFQRLNIMIDVASALEY 285
++ + + L+++ + G L EK Y+ ++ V A++Y
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER------DASRLIFQVLDAVKY 131
Query: 286 LHFGYSAPIIHCDLKPSNVL---LDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYM 342
LH I+H DLKP N+L LD++ +SDF ++K+ ED + T GY+
Sbjct: 132 LH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYV 185
Query: 343 APEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
APE + S D +S G++ G P
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 91/218 (41%), Gaps = 20/218 (9%)
Query: 165 HLELCRATDGFSENNLIGRGGFG----SVYKARLGDGMEVAVKVFNLQCGRALKGFDVEC 220
H + TDG+ IG G + ++KA E AVK+ + + ++
Sbjct: 14 HRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKAT---NXEFAVKIIDKSKRDPTEEIEI-- 68
Query: 221 EMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVA 280
+++ +H N+I + + ++ +V E G L + + + + ++ +
Sbjct: 69 -LLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSE-REASAVLFTIT 126
Query: 281 SALEYLHFGYSAPIIHCDLKPSNVLLDDNM----VAHLSDFSIAKLLTGEDQSMTQTQTL 336
+EYLH + ++H DLKPSN+L D + DF AK L E+ +
Sbjct: 127 KTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL--XTPC 181
Query: 337 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
T ++APE D++S G++L TG P
Sbjct: 182 YTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 92/214 (42%), Gaps = 30/214 (14%)
Query: 175 FSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--GRALKG----FDVECEMMKSIRH 228
F +G G F V A + K+F ++C +ALKG + E +++ I+H
Sbjct: 24 FEFKETLGTGAFSEVVLAE----EKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKH 79
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSL-----EKYMYSSNYILDIFQRLNIMIDVASAL 283
N++ + + LV++ + G L EK Y+ + ++ V A+
Sbjct: 80 ENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQ------VLDAV 133
Query: 284 EYLHFGYSAPIIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIG 340
YLH I+H DLKP N+L D+ +SDF ++K+ E + + T G
Sbjct: 134 YYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM---EGKGDVMSTACGTPG 187
Query: 341 YMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
Y+APE + S D +S G++ G P
Sbjct: 188 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 29/206 (14%)
Query: 181 IGRGGFGSVYKARLG-DGMEVAVKVF------NLQCGRALKGFDVECEMMKSIRHRNLIK 233
+G G +G+V A G G +VA+K L RA + E ++K +RH N+I
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYR----ELRLLKHMRHENVIG 88
Query: 234 VISTCSNEEFKA------LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLH 287
++ + +E LV+ +M L K M D Q L V L+ L
Sbjct: 89 LLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFL-----VYQMLKGLR 142
Query: 288 FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYG 347
+ ++A IIH DLKP N+ ++++ + DF +A+ E + T Y APE
Sbjct: 143 YIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE-----MXGXVVTRWYRAPEVI 197
Query: 348 REG-RVSTNGDVYSFGIMLMETFTGK 372
R + D++S G ++ E TGK
Sbjct: 198 LNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G VAVK + Q K E ++K ++H N+I ++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 164
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E +AT Y APE
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MXGXVATRWYRAPEIMLNWMH 219
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 220 YNQTVDIWSVGCIMAELLTGR 240
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 172 TDGFSENNLIGRGGFGSVY--KARLGDGMEVAVKVFNLQCGRALKGFDV---ECEMMKSI 226
+D + ++G+G FG V K ++ G E AVKV + + + + E +++K +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYL 286
H N+ K+ ++ + LV E G L + S ++ I+ V S + Y
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYX 142
Query: 287 HFGYSAPIIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA 343
H I+H DLKP N+LL+ + + DF ++ T + S + T Y+A
Sbjct: 143 H---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKXKDKIGTAYYIA 196
Query: 344 PEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNG 381
PE G DV+S G++L +G P FNG
Sbjct: 197 PEV-LHGTYDEKCDVWSTGVILYILLSGCPP----FNG 229
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 10/204 (4%)
Query: 175 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ---CGRALKGFDVECEMMKSIRHRN 230
F L+G+G FG V R G A+K+ + + E ++++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGY 290
L + + V+EY G L ++ + R ++ SALEYLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH--- 122
Query: 291 SAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG 350
S +++ D+K N++LD + ++DF + K G T T Y+APE +
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 351 RVSTNGDVYSFGIMLMETFTGKKP 374
D + G+++ E G+ P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G VAVK + Q K E ++K ++H N+I ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 140
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E +AT Y APE
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRWYRAPEIMLNWMH 195
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 196 YNQTVDIWSVGCIMAELLTGR 216
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 10/204 (4%)
Query: 175 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ---CGRALKGFDVECEMMKSIRHRN 230
F L+G+G FG V R G A+K+ + + E ++++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGY 290
L + + V+EY G L ++ + R ++ SALEYLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH--- 122
Query: 291 SAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG 350
S +++ D+K N++LD + ++DF + K G T T Y+APE +
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 351 RVSTNGDVYSFGIMLMETFTGKKP 374
D + G+++ E G+ P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 10/204 (4%)
Query: 175 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ---CGRALKGFDVECEMMKSIRHRN 230
F L+G+G FG V R G A+K+ + + E ++++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGY 290
L + + V+EY G L ++ + R ++ SALEYLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH--- 122
Query: 291 SAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG 350
S +++ D+K N++LD + ++DF + K G T T Y+APE +
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDN 180
Query: 351 RVSTNGDVYSFGIMLMETFTGKKP 374
D + G+++ E G+ P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + F +A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 73/150 (48%), Gaps = 9/150 (6%)
Query: 228 HRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLH 287
H N++K+ ++ LV+E + G L + + + + + IM + SA+ ++H
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSET-EASYIMRKLVSAVSHMH 123
Query: 288 FGYSAPIIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344
++H DLKP N+L +DN+ + DF A+L ++Q + T+ Y AP
Sbjct: 124 ---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL--KTPCFTLHYAAP 178
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
E + + D++S G++L +G+ P
Sbjct: 179 ELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 90/196 (45%), Gaps = 27/196 (13%)
Query: 168 LCRATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV----ECEM 222
C + + IG+G FG V+KAR G +VA+K ++ + +GF + E ++
Sbjct: 13 FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKI 70
Query: 223 MKSIRHRNLIKVISTCSNEEFKA--------LVLEYMPH---GSLEKYMYSSNYILDIFQ 271
++ ++H N++ +I C + LV ++ H G L + + L +
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--FTLSEIK 128
Query: 272 RLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKL--LTGEDQS 329
R+ M+ L L++ + I+H D+K +NVL+ + V L+DF +A+ L Q
Sbjct: 129 RVMQML-----LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 183
Query: 330 MTQTQTLATIGYMAPE 345
+ T+ Y PE
Sbjct: 184 NRYXNRVVTLWYRPPE 199
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 10/204 (4%)
Query: 175 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ---CGRALKGFDVECEMMKSIRHRN 230
F L+G+G FG V R G A+K+ + + E ++++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGY 290
L + + V+EY G L ++ + R ++ SALEYLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH--- 122
Query: 291 SAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG 350
S +++ D+K N++LD + ++DF + K G T T Y+APE +
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDN 180
Query: 351 RVSTNGDVYSFGIMLMETFTGKKP 374
D + G+++ E G+ P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 104/263 (39%), Gaps = 47/263 (17%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDV-----ECEMMKSIRHRNLIKVI 235
+GRG FG V++ +E + K + +KG D E ++ RHRN++ +
Sbjct: 13 LGRGEFGIVHRC-----VETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLH 67
Query: 236 STCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLN----------IMIDVASALEY 285
+ + E ++ E++ LDIF+R+N I+ V E
Sbjct: 68 ESFESMEELVMIFEFISG-------------LDIFERINTSAFELNEREIVSYVHQVCEA 114
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVAHLS--DFSIAKLLTGEDQSMTQTQTLATIGYMA 343
L F +S I H D++P N++ + + +F A+ L D Y A
Sbjct: 115 LQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRL---LFTAPEYYA 171
Query: 344 PEYGREGRVSTNGDVYSFGIMLMETFTGKKP----TNE-----IFNGEMTLKHWVNDWLP 394
PE + VST D++S G ++ +G P TN+ I N E T +
Sbjct: 172 PEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEIS 231
Query: 395 ISTMEVVGANLLSQEDIHFVAKE 417
I M+ V L+ + A E
Sbjct: 232 IEAMDFVDRLLVKERKSRMTASE 254
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 10/204 (4%)
Query: 175 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ---CGRALKGFDVECEMMKSIRHRN 230
F L+G+G FG V R G A+K+ + + E ++++ RH
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 71
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGY 290
L + + V+EY G L ++ + R ++ SALEYLH
Sbjct: 72 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH--- 127
Query: 291 SAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG 350
S +++ D+K N++LD + ++DF + K G T T Y+APE +
Sbjct: 128 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDN 185
Query: 351 RVSTNGDVYSFGIMLMETFTGKKP 374
D + G+++ E G+ P
Sbjct: 186 DYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + D +A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G VAVK + Q K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRWYRAPEIMLNWMH 199
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 10/204 (4%)
Query: 175 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ---CGRALKGFDVECEMMKSIRHRN 230
F L+G+G FG V R G A+K+ + + E ++++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGY 290
L + + V+EY G L ++ + R ++ SALEYLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH--- 122
Query: 291 SAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG 350
S +++ D+K N++LD + ++DF + K G T T Y+APE +
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 351 RVSTNGDVYSFGIMLMETFTGKKP 374
D + G+++ E G+ P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 168 LCRATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV----ECEM 222
C + + IG+G FG V+KAR G +VA+K ++ + +GF + E ++
Sbjct: 12 FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKI 69
Query: 223 MKSIRHRNLIKVISTCSNEEFKA--------LVLEYMPH---GSLEKYMYSSNYILDIFQ 271
++ ++H N++ +I C + LV ++ H G L + + L +
Sbjct: 70 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--FTLSEIK 127
Query: 272 RLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKL--LTGEDQS 329
R+ M+ L L++ + I+H D+K +NVL+ + V L+DF +A+ L Q
Sbjct: 128 RVMQML-----LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 182
Query: 330 MTQTQTLATIGYMAPEYGR-EGRVSTNGDVYSFGIMLMETFT 370
+ T+ Y PE E D++ G ++ E +T
Sbjct: 183 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 168 LCRATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFDV----ECEM 222
C + + IG+G FG V+KAR G +VA+K ++ + +GF + E ++
Sbjct: 13 FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKI 70
Query: 223 MKSIRHRNLIKVISTCSNEEFKA--------LVLEYMPH---GSLEKYMYSSNYILDIFQ 271
++ ++H N++ +I C + LV ++ H G L + + L +
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--FTLSEIK 128
Query: 272 RLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKL--LTGEDQS 329
R+ M+ L L++ + I+H D+K +NVL+ + V L+DF +A+ L Q
Sbjct: 129 RVMQML-----LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 183
Query: 330 MTQTQTLATIGYMAPEYGR-EGRVSTNGDVYSFGIMLMETFT 370
+ T+ Y PE E D++ G ++ E +T
Sbjct: 184 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G VAVK + Q K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + DF +A+ E +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRWYRAPEIMLNWMH 199
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 10/209 (4%)
Query: 170 RATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVFN---LQCGRALKGFDVECEMMKS 225
R + +G+GGF Y+ D EV A KV L + E + KS
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 82
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
+ + +++ +++F +VLE SL + + + R M ++Y
Sbjct: 83 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQY 141
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
LH + +IH DLK N+ L+D+M + DF +A + E + T Y+APE
Sbjct: 142 LH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKDLCGTPNYIAPE 196
Query: 346 YGREGRVSTNGDVYSFGIMLMETFTGKKP 374
+ S D++S G +L GK P
Sbjct: 197 VLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 10/204 (4%)
Query: 175 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ---CGRALKGFDVECEMMKSIRHRN 230
F L+G+G FG V R G A+K+ + + E ++++ RH
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 69
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGY 290
L + + V+EY G L ++ + R ++ SALEYLH
Sbjct: 70 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH--- 125
Query: 291 SAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG 350
S +++ D+K N++LD + ++DF + K G T T Y+APE +
Sbjct: 126 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDN 183
Query: 351 RVSTNGDVYSFGIMLMETFTGKKP 374
D + G+++ E G+ P
Sbjct: 184 DYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + D +A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 87/200 (43%), Gaps = 11/200 (5%)
Query: 180 LIGRGGFGSVYKARLGDGMEV-AVKVFNLQCGRALKGFD-VECE---MMKSIRHRNLIKV 234
+IGRG + V RL + A++V + + D V+ E ++ H L+ +
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 118
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPI 294
S E V+EY+ G L +M + + R +++ AL YLH I
Sbjct: 119 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGI 174
Query: 295 IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVST 354
I+ DLK NVLLD L+D+ + K G T + T Y+APE R
Sbjct: 175 IYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGTPNYIAPEILRGEDYGF 232
Query: 355 NGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G+ P
Sbjct: 233 SVDWWALGVLMFEMMAGRSP 252
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 180 LIGRGGFGSVYKARLGDGMEV-AVKVFNLQCGRALKGFDVEC-----EMMKSIRHRNLIK 233
+IGRG FG V +L + +V A+K+ N LK + C +++ + + +
Sbjct: 81 VIGRGAFGEVAVVKLKNADKVFAMKILNKW--EMLKRAETACFREERDVLVNGDSKWITT 138
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMYS-SNYILDIFQRLNI--MIDVASALEYLHFGY 290
+ ++ LV++Y G L + + + + R + M+ ++ LH+
Sbjct: 139 LHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY-- 196
Query: 291 SAPIIHCDLKPSNVLLDDNMVAHLSDF-SIAKLLTGEDQSMTQTQTLATIGYMAPEY--- 346
+H D+KP N+L+D N L+DF S KL+ ED ++ + + T Y++PE
Sbjct: 197 ----VHRDIKPDNILMDMNGHIRLADFGSCLKLM--EDGTVQSSVAVGTPDYISPEILQA 250
Query: 347 --GREGRVSTNGDVYSFGIMLMETFTGKKP 374
G +GR D +S G+ + E G+ P
Sbjct: 251 MEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 18/216 (8%)
Query: 170 RATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALK------GFDVECEM 222
+ D + +G G F V K R G+E A K + RA + + E +
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 223 MKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASA 282
++ + H N+I + N L+LE + G L ++ + L + + + +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDG 127
Query: 283 LEYLHFGYSAPIIHCDLKPSNV-LLDDNM-VAHLS--DFSIAKLLTGEDQSMTQTQTLAT 338
+ YLH + I H DLKP N+ LLD N+ + H+ DF +A + + + T
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGT 181
Query: 339 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
++APE + D++S G++ +G P
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+ G + ++ + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPAIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 19/212 (8%)
Query: 178 NNLIGRGGFGSVYKA-RLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIR-HRNLIKVI 235
+ L+G G + V A L +G E AVK+ Q G + E E + + ++N++++I
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 236 STCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPII 295
++ LV E + GS+ ++ + + + ++ DVA+AL++LH + I
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQKH-FNEREASRVVRDVAAALDFLH---TKGIA 133
Query: 296 HCDLKPSNVLLDDN---MVAHLSDFSIAK--LLTGEDQSMTQTQTLATIG---YMAPEY- 346
H DLKP N+L + + DF + L +T + G YMAPE
Sbjct: 134 HRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVV 193
Query: 347 ----GREGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D++S G++L +G P
Sbjct: 194 EVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 18/216 (8%)
Query: 170 RATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALK------GFDVECEM 222
+ D + +G G F V K R G+E A K + RA + + E +
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 223 MKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASA 282
++ + H N+I + N L+LE + G L ++ + L + + + +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDG 127
Query: 283 LEYLHFGYSAPIIHCDLKPSNV-LLDDNM-VAHLS--DFSIAKLLTGEDQSMTQTQTLAT 338
+ YLH + I H DLKP N+ LLD N+ + H+ DF +A + + + T
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGT 181
Query: 339 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
++APE + D++S G++ +G P
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 19/201 (9%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
+G G +GSV A G+ VAVK + Q K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 238 C----SNEEFKALVL-EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-R 351
IIH DLKPSN+ ++++ + D +A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 352 VSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 12/210 (5%)
Query: 170 RATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVFN---LQCGRALKGFDVECEMMKS 225
R + +G+GGF Y+ D EV A KV L + E + KS
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
+ + +++ +++F +VLE SL + + + R M ++Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQY 157
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL-ATIGYMAP 344
LH + +IH DLK N+ L+D+M + DF +A + + + + +TL T Y+AP
Sbjct: 158 LH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE---RKKTLCGTPNYIAP 211
Query: 345 EYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
E + S D++S G +L GK P
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 18/216 (8%)
Query: 170 RATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALK------GFDVECEM 222
+ D + +G G F V K R G+E A K + RA + + E +
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 223 MKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASA 282
++ + H N+I + N L+LE + G L ++ + L + + + +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDG 127
Query: 283 LEYLHFGYSAPIIHCDLKPSNV-LLDDNM-VAHLS--DFSIAKLLTGEDQSMTQTQTLAT 338
+ YLH + I H DLKP N+ LLD N+ + H+ DF +A + + + T
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGT 181
Query: 339 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
++APE + D++S G++ +G P
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 10/209 (4%)
Query: 170 RATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVFN---LQCGRALKGFDVECEMMKS 225
R + +G+GGF Y+ D EV A KV L + E + KS
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
+ + +++ +++F +VLE SL + + + R M ++Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQY 157
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
LH + +IH DLK N+ L+D+M + DF +A + E + T Y+APE
Sbjct: 158 LH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKDLCGTPNYIAPE 212
Query: 346 YGREGRVSTNGDVYSFGIMLMETFTGKKP 374
+ S D++S G +L GK P
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 18/216 (8%)
Query: 170 RATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALK------GFDVECEM 222
+ D + +G G F V K R G+E A K + RA + + E +
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 223 MKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASA 282
++ + H N+I + N L+LE + G L ++ + L + + + +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDG 127
Query: 283 LEYLHFGYSAPIIHCDLKPSNV-LLDDNM-VAHLS--DFSIAKLLTGEDQSMTQTQTLAT 338
+ YLH + I H DLKP N+ LLD N+ + H+ DF +A + + + T
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGT 181
Query: 339 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
++APE + D++S G++ +G P
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 18/216 (8%)
Query: 170 RATDGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALK------GFDVECEM 222
+ D + +G G F V K R G+E A K + RA + + E +
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 223 MKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASA 282
++ + H N+I + N L+LE + G L ++ + L + + + +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDG 127
Query: 283 LEYLHFGYSAPIIHCDLKPSNV-LLDDNM-VAHLS--DFSIAKLLTGEDQSMTQTQTLAT 338
+ YLH + I H DLKP N+ LLD N+ + H+ DF +A + + + T
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGT 181
Query: 339 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
++APE + D++S G++ +G P
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 10/209 (4%)
Query: 170 RATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVFN---LQCGRALKGFDVECEMMKS 225
R + +G+GGF Y+ D EV A KV L + E + KS
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
+ + +++ +++F +VLE SL + + + R M ++Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQY 157
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE 345
LH + +IH DLK N+ L+D+M + DF +A + E + T Y+APE
Sbjct: 158 LH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKXLCGTPNYIAPE 212
Query: 346 YGREGRVSTNGDVYSFGIMLMETFTGKKP 374
+ S D++S G +L GK P
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 101/234 (43%), Gaps = 12/234 (5%)
Query: 180 LIGRGGFGSVYKARLGDGMEV-AVKVFN---LQCGRALKGFDVECEMMKSIRHRNLIKVI 235
+G+GGF ++ D EV A K+ L + +E + +S+ H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 236 STCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPII 295
+ +F +VLE SL + + + R + + +YLH +I
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQYLHRNR---VI 139
Query: 296 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL-ATIGYMAPEYGREGRVST 354
H DLK N+ L++++ + DF +A T + + +TL T Y+APE + S
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 355 NGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ 408
DV+S G ++ GK P E L+ N++ + V A+L+ +
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQK 250
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 101/234 (43%), Gaps = 12/234 (5%)
Query: 180 LIGRGGFGSVYKARLGDGMEV-AVKVFN---LQCGRALKGFDVECEMMKSIRHRNLIKVI 235
+G+GGF ++ D EV A K+ L + +E + +S+ H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 236 STCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPII 295
+ +F +VLE SL + + + R + + +YLH +I
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQYLHRNR---VI 139
Query: 296 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL-ATIGYMAPEYGREGRVST 354
H DLK N+ L++++ + DF +A T + + +TL T Y+APE + S
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 355 NGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ 408
DV+S G ++ GK P E L+ N++ + V A+L+ +
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQK 250
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 101/234 (43%), Gaps = 12/234 (5%)
Query: 180 LIGRGGFGSVYKARLGDGMEV-AVKVFN---LQCGRALKGFDVECEMMKSIRHRNLIKVI 235
+G+GGF ++ D EV A K+ L + +E + +S+ H++++
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 236 STCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPII 295
+ +F +VLE SL + + + R + + +YLH +I
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQYLHRNR---VI 143
Query: 296 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL-ATIGYMAPEYGREGRVST 354
H DLK N+ L++++ + DF +A T + + +TL T Y+APE + S
Sbjct: 144 HRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF 200
Query: 355 NGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ 408
DV+S G ++ GK P E L+ N++ + V A+L+ +
Sbjct: 201 EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQK 254
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 86/170 (50%), Gaps = 20/170 (11%)
Query: 217 DVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIM 276
+ E E++K + H +IK+ + E++ +VLE M G L + + + + +L
Sbjct: 188 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YF 245
Query: 277 IDVASALEYLHFGYSAPIIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGEDQSMTQT 333
+ A++YLH IIH DLKP NVLL +++ + ++DF +K+L GE M
Sbjct: 246 YQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLM--- 298
Query: 334 QTL-ATIGYMAPEYGREGRVSTNG-----DVYSFGIMLMETFTGKKPTNE 377
+TL T Y+APE V T G D +S G++L +G P +E
Sbjct: 299 RTLCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSE 346
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 86/170 (50%), Gaps = 20/170 (11%)
Query: 217 DVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIM 276
+ E E++K + H +IK+ + E++ +VLE M G L + + + + +L
Sbjct: 202 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YF 259
Query: 277 IDVASALEYLHFGYSAPIIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGEDQSMTQT 333
+ A++YLH IIH DLKP NVLL +++ + ++DF +K+L GE M
Sbjct: 260 YQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLM--- 312
Query: 334 QTL-ATIGYMAPEYGREGRVSTNG-----DVYSFGIMLMETFTGKKPTNE 377
+TL T Y+APE V T G D +S G++L +G P +E
Sbjct: 313 RTLCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSE 360
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 13/206 (6%)
Query: 173 DGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDV---ECEMMKSIRH 228
D F +G G FG V + + G A+K+ + Q LK + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
L+K+ + + +V+EY+ G + ++ + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S +I+ DLKP N+L+D ++DF AK + G + T +APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEA-----LAPEIIL 211
Query: 349 EGRVSTNGDVYSFGIMLMETFTGKKP 374
+ D ++ G+++ E G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 29/223 (13%)
Query: 173 DGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFN---LQCGRALKG-----FDVECEMM 223
D + + +G G G V A +VA+K+ + G A + + E E++
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
K + H +IK+ + E++ +VLE M G L + + + + +L + A+
Sbjct: 70 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAV 127
Query: 284 EYLHFGYSAPIIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGEDQSMTQTQTL-ATI 339
+YLH IIH DLKP NVLL +++ + ++DF +K+L GE M +TL T
Sbjct: 128 QYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLM---RTLCGTP 180
Query: 340 GYMAPEYGREGRVSTNG-----DVYSFGIMLMETFTGKKPTNE 377
Y+APE V T G D +S G++L +G P +E
Sbjct: 181 TYLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 29/223 (13%)
Query: 173 DGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFN---LQCGRALKG-----FDVECEMM 223
D + + +G G G V A +VA+K+ + G A + + E E++
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
K + H +IK+ + E++ +VLE M G L + + + + +L + A+
Sbjct: 70 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAV 127
Query: 284 EYLHFGYSAPIIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGEDQSMTQTQTL-ATI 339
+YLH IIH DLKP NVLL +++ + ++DF +K+L GE M +TL T
Sbjct: 128 QYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLM---RTLCGTP 180
Query: 340 GYMAPEYGREGRVSTNG-----DVYSFGIMLMETFTGKKPTNE 377
Y+APE V T G D +S G++L +G P +E
Sbjct: 181 TYLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 29/223 (13%)
Query: 173 DGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFN---LQCGRALKG-----FDVECEMM 223
D + + +G G G V A +VA+K+ + G A + + E E++
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
K + H +IK+ + E++ +VLE M G L + + + + +L + A+
Sbjct: 69 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAV 126
Query: 284 EYLHFGYSAPIIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGEDQSMTQTQTL-ATI 339
+YLH IIH DLKP NVLL +++ + ++DF +K+L GE M +TL T
Sbjct: 127 QYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLM---RTLCGTP 179
Query: 340 GYMAPEYGREGRVSTNG-----DVYSFGIMLMETFTGKKPTNE 377
Y+APE V T G D +S G++L +G P +E
Sbjct: 180 TYLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSE 220
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 29/223 (13%)
Query: 173 DGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFN---LQCGRALKG-----FDVECEMM 223
D + + +G G G V A +VA+K+ + G A + + E E++
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
K + H +IK+ + E++ +VLE M G L + + + + +L + A+
Sbjct: 70 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAV 127
Query: 284 EYLHFGYSAPIIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGEDQSMTQTQTL-ATI 339
+YLH IIH DLKP NVLL +++ + ++DF +K+L GE M +TL T
Sbjct: 128 QYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLM---RTLCGTP 180
Query: 340 GYMAPEYGREGRVSTNG-----DVYSFGIMLMETFTGKKPTNE 377
Y+APE V T G D +S G++L +G P +E
Sbjct: 181 TYLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 102/235 (43%), Gaps = 44/235 (18%)
Query: 181 IGRGGFGSVYKA---RLGDGMEVAVKVFN-----LQCGRALKGFDVECEMMKSIRHRNLI 232
+G+G +G V+K+ R G+ + V K+F+ R + + E+ H N++
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVK-KIFDAFQNSTDAQRTFREIMILTELSG---HENIV 72
Query: 233 KVIST--CSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGY 290
+++ N+ LV +YM L + ++ IL+ + ++ + ++YLH
Sbjct: 73 NLLNVLRADNDRDVYLVFDYM-ETDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLH--- 126
Query: 291 SAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG-------------------EDQSMT 331
S ++H D+KPSN+LL+ ++DF +++ +D
Sbjct: 127 SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 332 QTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKPTNEIFNGEMTL 385
T +AT Y APE T G D++S G +L E GK IF G T+
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKP----IFPGSSTM 237
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 29/223 (13%)
Query: 173 DGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFN---LQCGRALKG-----FDVECEMM 223
D + + +G G G V A +VA+K+ + G A + + E E++
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 224 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASAL 283
K + H +IK+ + E++ +VLE M G L + + + + +L + A+
Sbjct: 76 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAV 133
Query: 284 EYLHFGYSAPIIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGEDQSMTQTQTL-ATI 339
+YLH IIH DLKP NVLL +++ + ++DF +K+L GE M +TL T
Sbjct: 134 QYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLM---RTLCGTP 186
Query: 340 GYMAPEYGREGRVSTNG-----DVYSFGIMLMETFTGKKPTNE 377
Y+APE V T G D +S G++L +G P +E
Sbjct: 187 TYLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSE 227
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 273 LNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM-- 330
L+I I +A A+E+LH S ++H DLKPSN+ + V + DF + + +++
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 331 --------TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLME 367
T + T YM+PE S D++S G++L E
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFE 268
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 180 LIGRGGFGSVY-KARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSI------RHRNLI 232
++G+G FG V R G AVK+ L+ ++ DVEC M++ + L
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKI--LKKDVVIQDDDVECTMVEKRVLALPGKPPFLT 84
Query: 233 KVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
++ S + V+EY+ G L MY + F+ + + A L F S
Sbjct: 85 QLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSK 140
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV 352
II+ DLK NV+LD ++DF + K + +T T Y+APE
Sbjct: 141 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD--GVTTKXFCGTPDYIAPEIIAYQPY 198
Query: 353 STNGDVYSFGIMLMETFTGKKPTNEIFNGE 382
+ D ++FG++L E G+ P F GE
Sbjct: 199 GKSVDWWAFGVLLYEMLAGQAP----FEGE 224
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 18/205 (8%)
Query: 181 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALK------GFDVECEMMKSIRHRNLIK 233
+G G F V K R G+E A K + RA + + E +++ + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 234 VISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAP 293
+ N L+LE + G L ++ + L + + + + + YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TKK 135
Query: 294 IIHCDLKPSNV-LLDDNM-VAHLS--DFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE 349
I H DLKP N+ LLD N+ + H+ DF +A + + + T ++APE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVNY 192
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKP 374
+ D++S G++ +G P
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASP 217
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 18/213 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ----CGRALKGFDVECE--MMKS 225
D + +G G F V K R G++ A K + R + D+E E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
I+H N+I + N+ L+LE + G L ++ + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVA----HLSDFSIAKLLTGEDQSMTQTQTLATIGY 341
LH S I H DLKP N++L D V + DF +A + D T +
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPAF 183
Query: 342 MAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
+APE + D++S G++ +G P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 180 LIGRGGFGSVY-KARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSI------RHRNLI 232
++G+G FG V R G AVK+ L+ ++ DVEC M++ + L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKI--LKKDVVIQDDDVECTMVEKRVLALPGKPPFLT 405
Query: 233 KVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA 292
++ S + V+EY+ G L MY + F+ + + A L F S
Sbjct: 406 QLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSK 461
Query: 293 PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV 352
II+ DLK NV+LD ++DF + K + +T T Y+APE
Sbjct: 462 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD--GVTTKXFCGTPDYIAPEIIAYQPY 519
Query: 353 STNGDVYSFGIMLMETFTGKKPTNEIFNGE 382
+ D ++FG++L E G+ P F GE
Sbjct: 520 GKSVDWWAFGVLLYEMLAGQAP----FEGE 545
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 274 NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 333
+ + + AL YL + +IH D+KPSN+LLD+ L DF I+ L +D++ ++
Sbjct: 128 KMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLV-DDKAKDRS 184
Query: 334 QTLATIGYMAPEY-----GREGRVSTNGDVYSFGIMLMETFTGKKP 374
A YMAPE + DV+S GI L+E TG+ P
Sbjct: 185 AGCAA--YMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 18/213 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ----CGRALKGFDVECE--MMKS 225
D + +G G F V K R G++ A K + R + D+E E ++K
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
I+H N+I + N+ L+LE + G L ++ + + + + + + + Y
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 128
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVA----HLSDFSIAKLLTGEDQSMTQTQTLATIGY 341
LH S I H DLKP N++L D V + DF +A + D T +
Sbjct: 129 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEF 182
Query: 342 MAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
+APE + D++S G++ +G P
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 23/217 (10%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
IG G G V A G+ VAVK + Q K E ++K + H+N+I +++
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 89
Query: 238 CSN----EEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ EEF+ LV+E M +L + ++ LD + ++ + +++LH S
Sbjct: 90 FTPQKTLEEFQDVYLVMELM-DANLCQVIHME---LDHERMSYLLYQMLCGIKHLH---S 142
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR 351
A IIH DLKPSN+++ + + DF +A+ + + T + T Y APE
Sbjct: 143 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAST---NFMMTPYVVTRYYRAPEVILGMG 199
Query: 352 VSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW 388
N D++S G ++ E G + IF G + W
Sbjct: 200 YKENVDIWSVGCIMGELVKG----SVIFQGTDHIDQW 232
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 18/213 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ----CGRALKGFDVECE--MMKS 225
D + +G G F V K R G++ A K + R + D+E E ++K
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
I+H N+I + N+ L+LE + G L ++ + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVA----HLSDFSIAKLLTGEDQSMTQTQTLATIGY 341
LH S I H DLKP N++L D V + DF +A + D T +
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEF 183
Query: 342 MAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
+APE + D++S G++ +G P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 18/213 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ----CGRALKGFDVECE--MMKS 225
D + +G G F V K R G++ A K + R + D+E E ++K
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
I+H N+I + N+ L+LE + G L ++ + + + + + + + Y
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 128
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVA----HLSDFSIAKLLTGEDQSMTQTQTLATIGY 341
LH S I H DLKP N++L D V + DF +A + D T +
Sbjct: 129 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEF 182
Query: 342 MAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
+APE + D++S G++ +G P
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 18/213 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ----CGRALKGFDVECE--MMKS 225
D + +G G F V K R G++ A K + R + D+E E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
I+H N+I + N+ L+LE + G L ++ + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVA----HLSDFSIAKLLTGEDQSMTQTQTLATIGY 341
LH S I H DLKP N++L D V + DF +A + D T +
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEF 183
Query: 342 MAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
+APE + D++S G++ +G P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 18/213 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ----CGRALKGFDVECE--MMKS 225
D + +G G F V K R G++ A K + R + D+E E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
I+H N+I + N+ L+LE + G L ++ + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVA----HLSDFSIAKLLTGEDQSMTQTQTLATIGY 341
LH S I H DLKP N++L D V + DF +A + D T +
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEF 183
Query: 342 MAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
+APE + D++S G++ +G P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 98/233 (42%), Gaps = 10/233 (4%)
Query: 180 LIGRGGFGSVYKARLGDGMEV-AVKVFN---LQCGRALKGFDVECEMMKSIRHRNLIKVI 235
+G+GGF ++ D EV A K+ L + +E + +S+ H++++
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 236 STCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPII 295
+ +F +VLE SL + + + R + + +YLH +I
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQYLHRNR---VI 161
Query: 296 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTN 355
H DLK N+ L++++ + DF +A + E + T Y+APE + S
Sbjct: 162 HRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKVLCGTPNYIAPEVLSKKGHSFE 219
Query: 356 GDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ 408
DV+S G ++ GK P E L+ N++ + V A+L+ +
Sbjct: 220 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQK 272
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 18/213 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ----CGRALKGFDVECE--MMKS 225
D + +G G F V K R G++ A K + R + D+E E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
I+H N+I + N+ L+LE + G L ++ + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVA----HLSDFSIAKLLTGEDQSMTQTQTLATIGY 341
LH S I H DLKP N++L D V + DF +A + D T +
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEF 183
Query: 342 MAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
+APE + D++S G++ +G P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 98/233 (42%), Gaps = 10/233 (4%)
Query: 180 LIGRGGFGSVYKARLGDGMEV-AVKVFN---LQCGRALKGFDVECEMMKSIRHRNLIKVI 235
+G+GGF ++ D EV A K+ L + +E + +S+ H++++
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 236 STCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPII 295
+ +F +VLE SL + + + R + + +YLH +I
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQYLHRNR---VI 163
Query: 296 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTN 355
H DLK N+ L++++ + DF +A + E + T Y+APE + S
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKVLCGTPNYIAPEVLSKKGHSFE 221
Query: 356 GDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ 408
DV+S G ++ GK P E L+ N++ + V A+L+ +
Sbjct: 222 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQK 274
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 18/213 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ----CGRALKGFDVECE--MMKS 225
D + +G G F V K R G++ A K + R + D+E E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
I+H N+I + N+ L+LE + G L ++ + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVA----HLSDFSIAKLLTGEDQSMTQTQTLATIGY 341
LH S I H DLKP N++L D V + DF +A + D T +
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEF 183
Query: 342 MAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
+APE + D++S G++ +G P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 18/213 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ----CGRALKGFDVECE--MMKS 225
D + +G G F V K R G++ A K + R + D+E E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
I+H N+I + N+ L+LE + G L ++ + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVA----HLSDFSIAKLLTGEDQSMTQTQTLATIGY 341
LH S I H DLKP N++L D V + DF +A + D T +
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEF 183
Query: 342 MAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
+APE + D++S G++ +G P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 98/229 (42%), Gaps = 41/229 (17%)
Query: 215 GFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKY-----MYSSNYILDI 269
F E +++ I++ + +N + ++ EYM + S+ K+ + NY I
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 270 -FQRLNIMI-DVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327
Q + +I V ++ Y+H I H D+KPSN+L+D N LSDF GE
Sbjct: 149 PIQVIKCIIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDF-------GES 199
Query: 328 QSMTQTQ---TLATIGYMAPEYGREGRVSTNG---DVYSFGIMLMETFTGKKPTN----- 376
+ M + + T +M PE+ S NG D++S GI L F P +
Sbjct: 200 EYMVDKKIKGSRGTYEFMPPEFF-SNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL 258
Query: 377 -EIFNGEMT--------LKHWVNDWLPISTME-VVGANLLSQEDIHFVA 415
E+FN T H++ P++ + N LS EDI F+
Sbjct: 259 VELFNNIRTKNIEYPLDRNHFL---YPLTNKKSTCSNNFLSNEDIDFLK 304
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 279 VASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLAT 338
VA +E+L S IH DL N+LL + V + DF +A+ + + + +
Sbjct: 200 VAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 339 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 374
+ +MAPE + + DV+SFG++L E F+ G P
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 293
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 18/213 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ----CGRALKGFDVECE--MMKS 225
D + +G G F V K R G++ A K + R + D+E E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
I+H N+I + N+ L+LE + G L ++ + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVA----HLSDFSIAKLLTGEDQSMTQTQTLATIGY 341
LH S I H DLKP N++L D V + DF +A + D T +
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEF 183
Query: 342 MAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
+APE + D++S G++ +G P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 279 VASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLAT 338
VA +E+L S IH DL N+LL + V + DF +A+ + + + +
Sbjct: 202 VAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 339 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 374
+ +MAPE + + DV+SFG++L E F+ G P
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 295
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 18/213 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ----CGRALKGFDVECE--MMKS 225
D + +G G F V K R G++ A K + R + D+E E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
I+H N+I + N+ L+LE + G L ++ + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVA----HLSDFSIAKLLTGEDQSMTQTQTLATIGY 341
LH S I H DLKP N++L D V + DF +A + D T +
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEF 183
Query: 342 MAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
+APE + D++S G++ +G P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 98/233 (42%), Gaps = 10/233 (4%)
Query: 180 LIGRGGFGSVYKARLGDGMEV-AVKVFN---LQCGRALKGFDVECEMMKSIRHRNLIKVI 235
+G+GGF ++ D EV A K+ L + +E + +S+ H++++
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 236 STCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPII 295
+ +F +VLE SL + + + R + + +YLH +I
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQYLHRNR---VI 137
Query: 296 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTN 355
H DLK N+ L++++ + DF +A + E + T Y+APE + S
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKVLCGTPNYIAPEVLSKKGHSFE 195
Query: 356 GDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ 408
DV+S G ++ GK P E L+ N++ + V A+L+ +
Sbjct: 196 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQK 248
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 279 VASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLAT 338
VA +E+L S IH DL N+LL + V + DF +A+ + + + +
Sbjct: 207 VAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 339 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 370
+ +MAPE + + DV+SFG++L E F+
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 18/213 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ----CGRALKGFDVECE--MMKS 225
D + +G G F V K R G++ A K + R + D+E E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
I+H N+I + N+ L+LE + G L ++ + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVA----HLSDFSIAKLLTGEDQSMTQTQTLATIGY 341
LH S I H DLKP N++L D V + DF +A + D T +
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEF 183
Query: 342 MAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
+APE + D++S G++ +G P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 23/217 (10%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
IG G G V A G+ VAVK + Q K E ++K + H+N+I +++
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 91
Query: 238 CSN----EEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ EEF+ LV+E M +L + ++ LD + ++ + +++LH S
Sbjct: 92 FTPQKTLEEFQDVYLVMELM-DANLCQVIHME---LDHERMSYLLYQMLCGIKHLH---S 144
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR 351
A IIH DLKPSN+++ + + DF +A+ + T + T Y APE
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTACT---NFMMTPYVVTRYYRAPEVILGMG 201
Query: 352 VSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW 388
+ N D++S G ++ E G IF G + W
Sbjct: 202 YAANVDIWSVGCIMGELVKG----CVIFQGTDHIDQW 234
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 26/211 (12%)
Query: 178 NNLIGRGGFGSVYKA---RLGD-----GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHR 229
N +G+G F ++K +GD EV +KV + + F MM + H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 230 NLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFG 289
+L+ C + LV E++ GSL+ Y+ + ++I +L + +A+A +HF
Sbjct: 73 HLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAA---MHFL 129
Query: 290 YSAPIIHCDLKPSNVLL---DDNMVAH-----LSDFSIAKLLTGEDQSMTQTQTLATIGY 341
+IH ++ N+LL +D + LSD I+ + +D + Q + I +
Sbjct: 130 EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD--ILQER----IPW 183
Query: 342 MAPEYGREGR-VSTNGDVYSFGIMLMETFTG 371
+ PE + ++ D +SFG L E +G
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 279 VASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLAT 338
VA +E+L S IH DL N+LL + V + DF +A+ + + + +
Sbjct: 209 VAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 339 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 370
+ +MAPE + + DV+SFG++L E F+
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 18/213 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ----CGRALKGFDVECE--MMKS 225
D + +G G F V K R G++ A K + R + D+E E ++K
Sbjct: 11 DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
I+H N+I + N+ L+LE + G L ++ + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVA----HLSDFSIAKLLTGEDQSMTQTQTLATIGY 341
LH S I H DLKP N++L D V + DF +A + D T +
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEF 183
Query: 342 MAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
+APE + D++S G++ +G P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 111/257 (43%), Gaps = 37/257 (14%)
Query: 181 IGRGGFGSVYKAR-LGDGMEVAVK-----VFNLQCGRALKGFDVECEMMKSIRHRNLIKV 234
+GRG +G V K R + G +AVK V + + R L D+ M+++ +
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS---MRTVDCPFTVTF 71
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRL------NIMIDVASALEYLHF 288
E + +E M SL+K+ ++D Q + I + + ALE+LH
Sbjct: 72 YGALFREGDVWICMELM-DTSLDKFY---KQVIDKGQTIPEDILGKIAVSIVKALEHLHS 127
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMA----- 343
S +IH D+KPSNVL++ + DF I+ L + + + YMA
Sbjct: 128 KLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDD---VAKDIDAGCKPYMAPERIN 182
Query: 344 PEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGA 403
PE ++G S D++S GI ++E + P + LK V + P + A
Sbjct: 183 PELNQKG-YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP-----QLPA 236
Query: 404 NLLSQEDIHFVAKEQCV 420
+ S E + F + QC+
Sbjct: 237 DKFSAEFVDFTS--QCL 251
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 96/226 (42%), Gaps = 23/226 (10%)
Query: 180 LIGRGGFGSVYKA-RLGDGMEVAVKVFNL----QCGRALKGFDVECE--MMKSIRH--RN 230
L+G GGFGSVY R+ D + VA+K G G V E ++K +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 231 LIKVISTCSNEEFKALVLEYM-PHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFG 289
+I+++ + L+LE M P L ++ + + R + V A+ + H
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCH-- 131
Query: 290 YSAPIIHCDLKPSNVLLDDNMVA-HLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
+ ++H D+K N+L+D N L DF LL + T T Y PE+ R
Sbjct: 132 -NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIR 186
Query: 349 EGRV-STNGDVYSFGIMLMETFTGKKP---TNEIFNGEMTLKHWVN 390
R + V+S GI+L + G P EI G++ + V+
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 232
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 106/261 (40%), Gaps = 28/261 (10%)
Query: 145 GKRPSNDANMPSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVK 203
G P ND + +A + LE + L+G GGFGSVY R+ D + VA+K
Sbjct: 1 GAAPCNDLHATKLAPGKEKEPLE-----SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 55
Query: 204 VFNL----QCGRALKGFDVECE--MMKSIRH--RNLIKVISTCSNEEFKALVLEY-MPHG 254
G G V E ++K + +I+++ + L+LE P
Sbjct: 56 HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 115
Query: 255 SLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVA-H 313
L ++ + + R + V A+ + H + ++H D+K N+L+D N
Sbjct: 116 DLFDFITERGALQEELAR-SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELK 171
Query: 314 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGK 372
L DF LL + T T Y PE+ R R + V+S GI+L + G
Sbjct: 172 LIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 227
Query: 373 KP---TNEIFNGEMTLKHWVN 390
P EI G++ + V+
Sbjct: 228 IPFEHDEEIIRGQVFFRQRVS 248
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 219 ECEMMKSIRHRNLIKVISTC----SNEEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQR 272
E +MK + H+N+I +++ S EEF+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERM 128
Query: 273 LNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 332
++ + +++LH SA IIH DLKPSN+++ + + DF +A+ S
Sbjct: 129 SYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMM 182
Query: 333 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW 388
T + T Y APE N D++S G+++ E G +F G + W
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG----GVLFPGTDHIDQW 234
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 23/217 (10%)
Query: 181 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 238 CSN----EEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ EEF+ LV+E M +L + + LD + ++ + +++LH S
Sbjct: 92 FTPQKTLEEFQDVYLVMELM-DANLXQVIQME---LDHERMSYLLYQMLXGIKHLH---S 144
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR 351
A IIH DLKPSN+++ + + DF +A+ S T + T Y APE
Sbjct: 145 AGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 352 VSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW 388
N D++S G ++ E K +F G + W
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 234
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 23/217 (10%)
Query: 181 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 238 CSN----EEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ EEF+ LV+E M +L + + LD + ++ + +++LH S
Sbjct: 85 FTPQKTLEEFQDVYLVMELM-DANLXQVIQME---LDHERMSYLLYQMLXGIKHLH---S 137
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR 351
A IIH DLKPSN+++ + + DF +A+ S T + T Y APE
Sbjct: 138 AGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG 194
Query: 352 VSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW 388
N D++S G ++ E K +F G + W
Sbjct: 195 YKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 227
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 20/150 (13%)
Query: 169 CRATDGFSENNLIGRGGFGSVYK--ARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSI 226
R T F E IG G FGSV+K RL DG A+K + + L G E ++ +
Sbjct: 3 SRYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIK----RSKKPLAGSVDEQNALREV 57
Query: 227 -------RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRL---NIM 276
+H ++++ S + ++ + EY GSL + + I+ F+ +++
Sbjct: 58 YAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLL 117
Query: 277 IDVASALEYLHFGYSAPIIHCDLKPSNVLL 306
+ V L Y+H S ++H D+KPSN+ +
Sbjct: 118 LQVGRGLRYIH---SMSLVHMDIKPSNIFI 144
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 20/149 (13%)
Query: 170 RATDGFSENNLIGRGGFGSVYK--ARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSI- 226
R T F E IG G FGSV+K RL DG A+K + + L G E ++ +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIK----RSKKPLAGSVDEQNALREVY 60
Query: 227 ------RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRL---NIMI 277
+H ++++ S + ++ + EY GSL + + I+ F+ ++++
Sbjct: 61 AHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL 120
Query: 278 DVASALEYLHFGYSAPIIHCDLKPSNVLL 306
V L Y+H S ++H D+KPSN+ +
Sbjct: 121 QVGRGLRYIH---SMSLVHMDIKPSNIFI 146
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 219 ECEMMKSIRHRNLIKVISTC----SNEEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQR 272
E +MK + H+N+I +++ S EEF+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERM 128
Query: 273 LNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 332
++ + +++LH SA IIH DLKPSN+++ + + DF +A+ S
Sbjct: 129 SYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMM 182
Query: 333 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW 388
T + T Y APE N D++S G+++ E G +F G + W
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG----GVLFPGTDHIDQW 234
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 106/261 (40%), Gaps = 28/261 (10%)
Query: 145 GKRPSNDANMPSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVK 203
G P ND + +A + LE + L+G GGFGSVY R+ D + VA+K
Sbjct: 1 GAAPCNDLHATKLAPGKEKEPLE-----SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 55
Query: 204 VFNL----QCGRALKGFDVECE--MMKSIRH--RNLIKVISTCSNEEFKALVLEY-MPHG 254
G G V E ++K + +I+++ + L+LE P
Sbjct: 56 HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 115
Query: 255 SLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVA-H 313
L ++ + + R + V A+ + H + ++H D+K N+L+D N
Sbjct: 116 DLFDFITERGALQEELAR-SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELK 171
Query: 314 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGK 372
L DF LL + T T Y PE+ R R + V+S GI+L + G
Sbjct: 172 LIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 227
Query: 373 KP---TNEIFNGEMTLKHWVN 390
P EI G++ + V+
Sbjct: 228 IPFEHDEEIIRGQVFFRQRVS 248
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 20/149 (13%)
Query: 170 RATDGFSENNLIGRGGFGSVYK--ARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSI- 226
R T F E IG G FGSV+K RL DG A+K + + L G E ++ +
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIK----RSKKPLAGSVDEQNALREVY 62
Query: 227 ------RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRL---NIMI 277
+H ++++ S + ++ + EY GSL + + I+ F+ ++++
Sbjct: 63 AHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL 122
Query: 278 DVASALEYLHFGYSAPIIHCDLKPSNVLL 306
V L Y+H S ++H D+KPSN+ +
Sbjct: 123 QVGRGLRYIH---SMSLVHMDIKPSNIFI 148
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 106/261 (40%), Gaps = 28/261 (10%)
Query: 145 GKRPSNDANMPSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVK 203
G P ND + +A + LE + L+G GGFGSVY R+ D + VA+K
Sbjct: 1 GAAPCNDLHATKLAPGKEKEPLE-----SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 55
Query: 204 VFNL----QCGRALKGFDVECE--MMKSIRH--RNLIKVISTCSNEEFKALVLEY-MPHG 254
G G V E ++K + +I+++ + L+LE P
Sbjct: 56 HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 115
Query: 255 SLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVA-H 313
L ++ + + R + V A+ + H + ++H D+K N+L+D N
Sbjct: 116 DLFDFITERGALQEELAR-SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELK 171
Query: 314 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGK 372
L DF LL + T T Y PE+ R R + V+S GI+L + G
Sbjct: 172 LIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 227
Query: 373 KP---TNEIFNGEMTLKHWVN 390
P EI G++ + V+
Sbjct: 228 IPFEHDEEIIRGQVFFRQRVS 248
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 20/149 (13%)
Query: 170 RATDGFSENNLIGRGGFGSVYK--ARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSI- 226
R T F E IG G FGSV+K RL DG A+K + + L G E ++ +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIK----RSKKPLAGSVDEQNALREVY 60
Query: 227 ------RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRL---NIMI 277
+H ++++ S + ++ + EY GSL + + I+ F+ ++++
Sbjct: 61 AHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL 120
Query: 278 DVASALEYLHFGYSAPIIHCDLKPSNVLL 306
V L Y+H S ++H D+KPSN+ +
Sbjct: 121 QVGRGLRYIH---SMSLVHMDIKPSNIFI 146
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 23/217 (10%)
Query: 181 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 238 CSN----EEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ EEF+ LV+E M +L + + LD + ++ + +++LH S
Sbjct: 92 FTPQKTLEEFQDVYLVMELM-DANLXQVIQME---LDHERMSYLLYQMLXGIKHLH---S 144
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR 351
A IIH DLKPSN+++ + + DF +A+ S T + T Y APE
Sbjct: 145 AGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 352 VSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW 388
N D++S G ++ E K +F G + W
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 234
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 101/246 (41%), Gaps = 36/246 (14%)
Query: 151 DANMPSIATW-RTFSHL--ELCRATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVFN 206
D + W + F+ L E+ + F +IGRG FG V ++ + + A+K+ N
Sbjct: 49 DKYVAEFLEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILN 108
Query: 207 LQCGRALKGFDVECEMMKSIRHRNLIKVISTCS----------NEEFKALVLEYMPHGSL 256
LK + C R + V C +E LV++Y G L
Sbjct: 109 KW--EMLKRAETAC-----FREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDL 161
Query: 257 EKYMYS-SNYILDIFQRLNI--MIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAH 313
+ + + + R I M+ ++ LH+ +H D+KP NVLLD N
Sbjct: 162 LTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHY------VHRDIKPDNVLLDVNGHIR 215
Query: 314 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-----GRVSTNGDVYSFGIMLMET 368
L+DF + L +D ++ + + T Y++PE + G+ D +S G+ + E
Sbjct: 216 LADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEM 274
Query: 369 FTGKKP 374
G+ P
Sbjct: 275 LYGETP 280
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 23/217 (10%)
Query: 181 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 238 CSN----EEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ EEF+ LV+E M +L + + LD + ++ + +++LH S
Sbjct: 92 FTPQKTLEEFQDVYLVMELM-DANLXQVIQME---LDHERMSYLLYQMLCGIKHLH---S 144
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR 351
A IIH DLKPSN+++ + + DF +A+ S T + T Y APE
Sbjct: 145 AGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 352 VSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW 388
N D++S G ++ E K +F G + W
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 234
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 101/246 (41%), Gaps = 36/246 (14%)
Query: 151 DANMPSIATW-RTFSHL--ELCRATDGFSENNLIGRGGFGSVYKARLGDGMEV-AVKVFN 206
D + W + F+ L E+ + F +IGRG FG V ++ + + A+K+ N
Sbjct: 65 DKYVAEFLEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILN 124
Query: 207 LQCGRALKGFDVECEMMKSIRHRNLIKVISTCS----------NEEFKALVLEYMPHGSL 256
LK + C R + V C +E LV++Y G L
Sbjct: 125 KW--EMLKRAETAC-----FREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDL 177
Query: 257 EKYMYS-SNYILDIFQRLNI--MIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAH 313
+ + + + R I M+ ++ LH+ +H D+KP NVLLD N
Sbjct: 178 LTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHY------VHRDIKPDNVLLDVNGHIR 231
Query: 314 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-----GRVSTNGDVYSFGIMLMET 368
L+DF + L +D ++ + + T Y++PE + G+ D +S G+ + E
Sbjct: 232 LADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEM 290
Query: 369 FTGKKP 374
G+ P
Sbjct: 291 LYGETP 296
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 26/211 (12%)
Query: 178 NNLIGRGGFGSVYKA---RLGD-----GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHR 229
N +G+G F ++K +GD EV +KV + + F MM + H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 230 NLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFG 289
+L+ C + LV E++ GSL+ Y+ + ++I +L + +A A +HF
Sbjct: 73 HLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWA---MHFL 129
Query: 290 YSAPIIHCDLKPSNVLL---DDNMVAH-----LSDFSIAKLLTGEDQSMTQTQTLATIGY 341
+IH ++ N+LL +D + LSD I+ + +D + Q + I +
Sbjct: 130 EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD--ILQER----IPW 183
Query: 342 MAPEYGREGR-VSTNGDVYSFGIMLMETFTG 371
+ PE + ++ D +SFG L E +G
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 22/202 (10%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVI-- 235
+G G +GSV A G +VA+K + Q K E ++K ++H N+I ++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 236 ----STCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
S+ N LV+ +M L+K M F I V L+ L + +S
Sbjct: 110 FTPASSLRNFYDFYLVMPFM-QTDLQKIMGME------FSEEKIQYLVYQMLKGLKYIHS 162
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG- 350
A ++H DLKP N+ ++++ + DF +A+ E T + T Y APE
Sbjct: 163 AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWM 217
Query: 351 RVSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TGK
Sbjct: 218 HYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 103/206 (50%), Gaps = 29/206 (14%)
Query: 142 RQKGK-RPSNDANMPSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKARLGDGME- 199
+Q+G+ R + ++ P+ + R S ++ D + +LIG G +G V +A D +E
Sbjct: 24 QQEGQQRKQHHSSKPTASMPRPHSDWQI---PDRYEIRHLIGTGSYGHVCEAY--DKLEK 78
Query: 200 --VAVK----VFN--LQCGRALKGFDVECEMMKSIRHRNLIKVISTC---SNEEFKAL-- 246
VA+K VF + C R L+ E ++ + H +++KV+ E+F L
Sbjct: 79 RVVAIKKILRVFEDLIDCKRILR----EIAILNRLNHDHVVKVLDIVIPKDVEKFDELYV 134
Query: 247 VLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLL 306
VLE + +K + Y+ ++ + ++ ++ ++Y+H SA I+H DLKP+N L+
Sbjct: 135 VLE-IADSDFKKLFRTPVYLTELHIK-TLLYNLLVGVKYVH---SAGILHRDLKPANCLV 189
Query: 307 DDNMVAHLSDFSIAKLLTGEDQSMTQ 332
+ + + DF +A+ + + +Q
Sbjct: 190 NQDCSVKVCDFGLARTVDYPENGNSQ 215
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 23/217 (10%)
Query: 181 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 238 CSN----EEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ EEF+ LV+E M + LD + ++ + +++LH S
Sbjct: 85 FTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLH---S 137
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR 351
A IIH DLKPSN+++ + + DF +A+ S T + T Y APE
Sbjct: 138 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG 194
Query: 352 VSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW 388
N D++S G ++ E K +F G + W
Sbjct: 195 YKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 227
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 23/217 (10%)
Query: 181 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 238 CSN----EEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ EEF+ LV+E M + LD + ++ + +++LH S
Sbjct: 86 FTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLH---S 138
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR 351
A IIH DLKPSN+++ + + DF +A+ S T + T Y APE
Sbjct: 139 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG 195
Query: 352 VSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW 388
N D++S G ++ E K +F G + W
Sbjct: 196 YKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 228
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 22/202 (10%)
Query: 181 IGRGGFGSVYKA-RLGDGMEVAVKVFN--LQCGRALKGFDVECEMMKSIRHRNLIKVI-- 235
+G G +GSV A G +VA+K + Q K E ++K ++H N+I ++
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 236 ----STCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
S+ N LV+ +M L+K M F I V L+ L + +S
Sbjct: 92 FTPASSLRNFYDFYLVMPFM-QTDLQKIMGLK------FSEEKIQYLVYQMLKGLKYIHS 144
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG- 350
A ++H DLKP N+ ++++ + DF +A+ E T + T Y APE
Sbjct: 145 AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWM 199
Query: 351 RVSTNGDVYSFGIMLMETFTGK 372
+ D++S G ++ E TGK
Sbjct: 200 HYNQTVDIWSVGCIMAEMLTGK 221
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 23/217 (10%)
Query: 181 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 238 CSN----EEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ EEF+ LV+E M + LD + ++ + +++LH S
Sbjct: 86 FTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLH---S 138
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR 351
A IIH DLKPSN+++ + + DF +A+ S T + T Y APE
Sbjct: 139 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG 195
Query: 352 VSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW 388
N D++S G ++ E K +F G + W
Sbjct: 196 YKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 228
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 23/217 (10%)
Query: 181 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 238 CSN----EEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ EEF+ LV+E M + LD + ++ + +++LH S
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLH---S 144
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR 351
A IIH DLKPSN+++ + + DF +A+ S T + T Y APE
Sbjct: 145 AGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 352 VSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW 388
N D++S G ++ E K +F G + W
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 234
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 105/258 (40%), Gaps = 28/258 (10%)
Query: 148 PSNDANMPSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFN 206
P ND + +A + LE + L+G GGFGSVY R+ D + VA+K
Sbjct: 31 PCNDLHATKLAPGKEKEPLE-----SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE 85
Query: 207 L----QCGRALKGFDVECE--MMKSIRH--RNLIKVISTCSNEEFKALVLEY-MPHGSLE 257
G G V E ++K + +I+++ + L+LE P L
Sbjct: 86 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 145
Query: 258 KYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVA-HLSD 316
++ + + R + V A+ + H + ++H D+K N+L+D N L D
Sbjct: 146 DFITERGALQEELAR-SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLID 201
Query: 317 FSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKP- 374
F LL + T T Y PE+ R R + V+S GI+L + G P
Sbjct: 202 FGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
Query: 375 --TNEIFNGEMTLKHWVN 390
EI G++ + V+
Sbjct: 258 EHDEEIIRGQVFFRQRVS 275
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 105/258 (40%), Gaps = 28/258 (10%)
Query: 148 PSNDANMPSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFN 206
P ND + +A + LE + L+G GGFGSVY R+ D + VA+K
Sbjct: 16 PCNDLHATKLAPGKEKEPLE-----SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE 70
Query: 207 L----QCGRALKGFDVECE--MMKSIRH--RNLIKVISTCSNEEFKALVLEY-MPHGSLE 257
G G V E ++K + +I+++ + L+LE P L
Sbjct: 71 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 130
Query: 258 KYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVA-HLSD 316
++ + + R + V A+ + H + ++H D+K N+L+D N L D
Sbjct: 131 DFITERGALQEELAR-SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLID 186
Query: 317 FSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKP- 374
F LL + T T Y PE+ R R + V+S GI+L + G P
Sbjct: 187 FGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
Query: 375 --TNEIFNGEMTLKHWVN 390
EI G++ + V+
Sbjct: 243 EHDEEIIGGQVFFRQRVS 260
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 105/258 (40%), Gaps = 28/258 (10%)
Query: 148 PSNDANMPSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFN 206
P ND + +A + LE + L+G GGFGSVY R+ D + VA+K
Sbjct: 17 PCNDLHATKLAPGKEKEPLE-----SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE 71
Query: 207 L----QCGRALKGFDVECE--MMKSIRH--RNLIKVISTCSNEEFKALVLEY-MPHGSLE 257
G G V E ++K + +I+++ + L+LE P L
Sbjct: 72 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 131
Query: 258 KYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVA-HLSD 316
++ + + R + V A+ + H + ++H D+K N+L+D N L D
Sbjct: 132 DFITERGALQEELAR-SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLID 187
Query: 317 FSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKP- 374
F LL + T T Y PE+ R R + V+S GI+L + G P
Sbjct: 188 FGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
Query: 375 --TNEIFNGEMTLKHWVN 390
EI G++ + V+
Sbjct: 244 EHDEEIIGGQVFFRQRVS 261
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 105/258 (40%), Gaps = 28/258 (10%)
Query: 148 PSNDANMPSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFN 206
P ND + +A + LE + L+G GGFGSVY R+ D + VA+K
Sbjct: 3 PCNDLHATKLAPGKEKEPLE-----SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE 57
Query: 207 L----QCGRALKGFDVECE--MMKSIRH--RNLIKVISTCSNEEFKALVLEY-MPHGSLE 257
G G V E ++K + +I+++ + L+LE P L
Sbjct: 58 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 117
Query: 258 KYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVA-HLSD 316
++ + + R + V A+ + H + ++H D+K N+L+D N L D
Sbjct: 118 DFITERGALQEELAR-SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLID 173
Query: 317 FSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKP- 374
F LL + T T Y PE+ R R + V+S GI+L + G P
Sbjct: 174 FGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 229
Query: 375 --TNEIFNGEMTLKHWVN 390
EI G++ + V+
Sbjct: 230 EHDEEIIRGQVFFRQRVS 247
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 105/258 (40%), Gaps = 28/258 (10%)
Query: 148 PSNDANMPSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFN 206
P ND + +A + LE + L+G GGFGSVY R+ D + VA+K
Sbjct: 17 PCNDLHATKLAPGKEKEPLE-----SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE 71
Query: 207 L----QCGRALKGFDVECE--MMKSIRH--RNLIKVISTCSNEEFKALVLEY-MPHGSLE 257
G G V E ++K + +I+++ + L+LE P L
Sbjct: 72 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 131
Query: 258 KYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVA-HLSD 316
++ + + R + V A+ + H + ++H D+K N+L+D N L D
Sbjct: 132 DFITERGALQEELAR-SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLID 187
Query: 317 FSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKP- 374
F LL + T T Y PE+ R R + V+S GI+L + G P
Sbjct: 188 FGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
Query: 375 --TNEIFNGEMTLKHWVN 390
EI G++ + V+
Sbjct: 244 EHDEEIIGGQVFFRQRVS 261
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 105/258 (40%), Gaps = 28/258 (10%)
Query: 148 PSNDANMPSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFN 206
P ND + +A + LE + L+G GGFGSVY R+ D + VA+K
Sbjct: 23 PCNDLHATKLAPGKEKEPLE-----SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE 77
Query: 207 L----QCGRALKGFDVECE--MMKSIRH--RNLIKVISTCSNEEFKALVLEY-MPHGSLE 257
G G V E ++K + +I+++ + L+LE P L
Sbjct: 78 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 137
Query: 258 KYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVA-HLSD 316
++ + + R + V A+ + H + ++H D+K N+L+D N L D
Sbjct: 138 DFITERGALQEELAR-SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLID 193
Query: 317 FSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKP- 374
F LL + T T Y PE+ R R + V+S GI+L + G P
Sbjct: 194 FGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 249
Query: 375 --TNEIFNGEMTLKHWVN 390
EI G++ + V+
Sbjct: 250 EHDEEIIRGQVFFRQRVS 267
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 23/217 (10%)
Query: 181 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 238 CSN----EEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ EEF+ LV+E M + LD + ++ + +++LH S
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLH---S 144
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR 351
A IIH DLKPSN+++ + + DF +A+ S T + T Y APE
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 352 VSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW 388
N D++S G ++ E K +F G + W
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 234
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 105/258 (40%), Gaps = 28/258 (10%)
Query: 148 PSNDANMPSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFN 206
P ND + +A + LE + L+G GGFGSVY R+ D + VA+K
Sbjct: 16 PCNDLHATKLAPGKEKEPLE-----SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE 70
Query: 207 L----QCGRALKGFDVECE--MMKSIRH--RNLIKVISTCSNEEFKALVLEY-MPHGSLE 257
G G V E ++K + +I+++ + L+LE P L
Sbjct: 71 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 130
Query: 258 KYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVA-HLSD 316
++ + + R + V A+ + H + ++H D+K N+L+D N L D
Sbjct: 131 DFITERGALQEELAR-SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLID 186
Query: 317 FSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKP- 374
F LL + T T Y PE+ R R + V+S GI+L + G P
Sbjct: 187 FGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
Query: 375 --TNEIFNGEMTLKHWVN 390
EI G++ + V+
Sbjct: 243 EHDEEIIRGQVFFRQRVS 260
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 105/258 (40%), Gaps = 28/258 (10%)
Query: 148 PSNDANMPSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFN 206
P ND + +A + LE + L+G GGFGSVY R+ D + VA+K
Sbjct: 3 PCNDLHATKLAPGKEKEPLE-----SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE 57
Query: 207 L----QCGRALKGFDVECE--MMKSIRH--RNLIKVISTCSNEEFKALVLEY-MPHGSLE 257
G G V E ++K + +I+++ + L+LE P L
Sbjct: 58 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 117
Query: 258 KYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVA-HLSD 316
++ + + R + V A+ + H + ++H D+K N+L+D N L D
Sbjct: 118 DFITERGALQEELAR-SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLID 173
Query: 317 FSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKP- 374
F LL + T T Y PE+ R R + V+S GI+L + G P
Sbjct: 174 FGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 229
Query: 375 --TNEIFNGEMTLKHWVN 390
EI G++ + V+
Sbjct: 230 EHDEEIIRGQVFFRQRVS 247
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 105/258 (40%), Gaps = 28/258 (10%)
Query: 148 PSNDANMPSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFN 206
P ND + +A + LE + L+G GGFGSVY R+ D + VA+K
Sbjct: 17 PCNDLHATKLAPGKEKEPLE-----SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE 71
Query: 207 L----QCGRALKGFDVECE--MMKSIRH--RNLIKVISTCSNEEFKALVLEY-MPHGSLE 257
G G V E ++K + +I+++ + L+LE P L
Sbjct: 72 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 131
Query: 258 KYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVA-HLSD 316
++ + + R + V A+ + H + ++H D+K N+L+D N L D
Sbjct: 132 DFITERGALQEELAR-SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLID 187
Query: 317 FSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKP- 374
F LL + T T Y PE+ R R + V+S GI+L + G P
Sbjct: 188 FGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
Query: 375 --TNEIFNGEMTLKHWVN 390
EI G++ + V+
Sbjct: 244 EHDEEIIGGQVFFRQRVS 261
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 105/258 (40%), Gaps = 28/258 (10%)
Query: 148 PSNDANMPSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFN 206
P ND + +A + LE + L+G GGFGSVY R+ D + VA+K
Sbjct: 17 PCNDLHATKLAPGKEKEPLE-----SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE 71
Query: 207 L----QCGRALKGFDVECE--MMKSIRH--RNLIKVISTCSNEEFKALVLEY-MPHGSLE 257
G G V E ++K + +I+++ + L+LE P L
Sbjct: 72 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 131
Query: 258 KYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVA-HLSD 316
++ + + R + V A+ + H + ++H D+K N+L+D N L D
Sbjct: 132 DFITERGALQEELAR-SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLID 187
Query: 317 FSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKP- 374
F LL + T T Y PE+ R R + V+S GI+L + G P
Sbjct: 188 FGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
Query: 375 --TNEIFNGEMTLKHWVN 390
EI G++ + V+
Sbjct: 244 EHDEEIIGGQVFFRQRVS 261
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 23/217 (10%)
Query: 181 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 238 CSN----EEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ EEF+ LV+E M + LD + ++ + +++LH S
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLH---S 144
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR 351
A IIH DLKPSN+++ + + DF +A+ S T + T Y APE
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 352 VSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW 388
N D++S G ++ E K +F G + W
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 234
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 105/258 (40%), Gaps = 28/258 (10%)
Query: 148 PSNDANMPSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFN 206
P ND + +A + LE + L+G GGFGSVY R+ D + VA+K
Sbjct: 16 PCNDLHATKLAPGKEKEPLE-----SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE 70
Query: 207 L----QCGRALKGFDVECE--MMKSIRH--RNLIKVISTCSNEEFKALVLEY-MPHGSLE 257
G G V E ++K + +I+++ + L+LE P L
Sbjct: 71 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 130
Query: 258 KYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVA-HLSD 316
++ + + R + V A+ + H + ++H D+K N+L+D N L D
Sbjct: 131 DFITERGALQEELAR-SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLID 186
Query: 317 FSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKP- 374
F LL + T T Y PE+ R R + V+S GI+L + G P
Sbjct: 187 FGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
Query: 375 --TNEIFNGEMTLKHWVN 390
EI G++ + V+
Sbjct: 243 EHDEEIIGGQVFFRQRVS 260
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 23/217 (10%)
Query: 181 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 90
Query: 238 CSN----EEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ EEF+ LV+E M + LD + ++ + +++LH S
Sbjct: 91 FTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLH---S 143
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR 351
A IIH DLKPSN+++ + + DF +A+ S T + T Y APE
Sbjct: 144 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG 200
Query: 352 VSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW 388
N D++S G ++ E K +F G + W
Sbjct: 201 YKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 233
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 20/176 (11%)
Query: 219 ECEMMKSIRHRNLIKVISTC----SNEEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQR 272
E +MK + H+N+I +++ S EEF+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERM 128
Query: 273 LNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 332
++ + +++LH SA IIH DLKPSN+++ + + DF +A+ S
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMM 182
Query: 333 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW 388
T + T Y APE N D++S G ++ E G +F G + W
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG----GVLFPGTDHIDQW 234
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 92/227 (40%), Gaps = 32/227 (14%)
Query: 167 ELCRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVK-VFN--------------LQCGR 211
EL ++ I G +G+V +G+ VA+K VFN C R
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 212 ALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKA-----LVLEYMPHGSLEKYMYSSNYI 266
L+ E ++ H N++ + + E A LV E M L + ++ +
Sbjct: 76 VLR----EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIV 130
Query: 267 LDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 326
+ M + L LH A ++H DL P N+LL DN + DF++A+ T +
Sbjct: 131 ISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAREDTAD 187
Query: 327 DQSMTQTQTLATIGYMAPEYGREGRVSTN-GDVYSFGIMLMETFTGK 372
+T + Y APE + + T D++S G ++ E F K
Sbjct: 188 ---ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 105/258 (40%), Gaps = 28/258 (10%)
Query: 148 PSNDANMPSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFN 206
P ND + +A + LE + L+G GGFGSVY R+ D + VA+K
Sbjct: 16 PCNDLHATKLAPGKEKEPLE-----SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE 70
Query: 207 L----QCGRALKGFDVECE--MMKSIRH--RNLIKVISTCSNEEFKALVLEY-MPHGSLE 257
G G V E ++K + +I+++ + L+LE P L
Sbjct: 71 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 130
Query: 258 KYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVA-HLSD 316
++ + + R + V A+ + H + ++H D+K N+L+D N L D
Sbjct: 131 DFITERGALQEELAR-SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLID 186
Query: 317 FSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKP- 374
F LL + T T Y PE+ R R + V+S GI+L + G P
Sbjct: 187 FGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
Query: 375 --TNEIFNGEMTLKHWVN 390
EI G++ + V+
Sbjct: 243 EHDEEIIGGQVFFRQRVS 260
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 23/217 (10%)
Query: 181 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 238 CSN----EEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ EEF+ LV+E M + LD + ++ + +++LH S
Sbjct: 93 FTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLH---S 145
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR 351
A IIH DLKPSN+++ + + DF +A+ S T + T Y APE
Sbjct: 146 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG 202
Query: 352 VSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW 388
N D++S G ++ E K +F G + W
Sbjct: 203 YKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 235
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 105/258 (40%), Gaps = 28/258 (10%)
Query: 148 PSNDANMPSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFN 206
P ND + +A + LE + L+G GGFGSVY R+ D + VA+K
Sbjct: 36 PCNDLHATKLAPGKEKEPLE-----SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE 90
Query: 207 L----QCGRALKGFDVECE--MMKSIRH--RNLIKVISTCSNEEFKALVLEY-MPHGSLE 257
G G V E ++K + +I+++ + L+LE P L
Sbjct: 91 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 150
Query: 258 KYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVA-HLSD 316
++ + + R + V A+ + H + ++H D+K N+L+D N L D
Sbjct: 151 DFITERGALQEELAR-SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLID 206
Query: 317 FSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKP- 374
F LL + T T Y PE+ R R + V+S GI+L + G P
Sbjct: 207 FGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 262
Query: 375 --TNEIFNGEMTLKHWVN 390
EI G++ + V+
Sbjct: 263 EHDEEIIRGQVFFRQRVS 280
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 105/258 (40%), Gaps = 28/258 (10%)
Query: 148 PSNDANMPSIATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKVFN 206
P ND + +A + LE + L+G GGFGSVY R+ D + VA+K
Sbjct: 31 PCNDLHATKLAPGKEKEPLE-----SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE 85
Query: 207 L----QCGRALKGFDVECE--MMKSIRH--RNLIKVISTCSNEEFKALVLEY-MPHGSLE 257
G G V E ++K + +I+++ + L+LE P L
Sbjct: 86 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 145
Query: 258 KYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVA-HLSD 316
++ + + R + V A+ + H + ++H D+K N+L+D N L D
Sbjct: 146 DFITERGALQEELAR-SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLID 201
Query: 317 FSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKP- 374
F LL + T T Y PE+ R R + V+S GI+L + G P
Sbjct: 202 FGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
Query: 375 --TNEIFNGEMTLKHWVN 390
EI G++ + V+
Sbjct: 258 EHDEEIIRGQVFFRQRVS 275
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 23/217 (10%)
Query: 181 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 238 CSN----EEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ EEF+ LV+E M + LD + ++ + +++LH S
Sbjct: 93 FTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLH---S 145
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR 351
A IIH DLKPSN+++ + + DF +A+ S T + T Y APE
Sbjct: 146 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG 202
Query: 352 VSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW 388
N D++S G ++ E K +F G + W
Sbjct: 203 YKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 235
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 92/227 (40%), Gaps = 32/227 (14%)
Query: 167 ELCRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVK-VFN--------------LQCGR 211
EL ++ I G +G+V +G+ VA+K VFN C R
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 212 ALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKA-----LVLEYMPHGSLEKYMYSSNYI 266
L+ E ++ H N++ + + E A LV E M L + ++ +
Sbjct: 76 VLR----EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIV 130
Query: 267 LDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 326
+ M + L LH A ++H DL P N+LL DN + DF++A+ T +
Sbjct: 131 ISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAREDTAD 187
Query: 327 DQSMTQTQTLATIGYMAPEYGREGRVSTN-GDVYSFGIMLMETFTGK 372
+T + Y APE + + T D++S G ++ E F K
Sbjct: 188 ---ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 9/200 (4%)
Query: 179 NLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFD---VECEMMKSIRHRNLIKV 234
L+G+G FG V + G A+K+ + A E ++++ RH L +
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 213
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPI 294
+ + V+EY G L ++ + R ++ SAL+YLH +
Sbjct: 214 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--SEKNV 270
Query: 295 IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVST 354
++ DLK N++LD + ++DF + K G T T Y+APE +
Sbjct: 271 VYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDNDYGR 328
Query: 355 NGDVYSFGIMLMETFTGKKP 374
D + G+++ E G+ P
Sbjct: 329 AVDWWGLGVVMYEMMCGRLP 348
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 20/176 (11%)
Query: 219 ECEMMKSIRHRNLIKVISTC----SNEEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQR 272
E +MK + H+N+I +++ S EEF+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERM 128
Query: 273 LNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 332
++ + +++LH SA IIH DLKPSN+++ + + DF +A+ S
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMM 182
Query: 333 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW 388
T + T Y APE N D++S G ++ E G +F G + W
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG----GVLFPGTDHIDQW 234
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 81/213 (38%), Gaps = 13/213 (6%)
Query: 173 DGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNL 231
D + + +G G FG V++ G A K + E + M +RH L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 232 IKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ + ++ ++ E+M G L + + + + + + M V L ++H
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---E 273
Query: 292 APIIHCDLKPSNVLLDDNMVAHLS--DFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE 349
+H DLKP N++ L DF + L D + T T + APE
Sbjct: 274 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFAAPEVAEG 330
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGE 382
V D++S G++ +G P F GE
Sbjct: 331 KPVGYYTDMWSVGVLSYILLSGLSP----FGGE 359
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 9/200 (4%)
Query: 179 NLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFD---VECEMMKSIRHRNLIKV 234
L+G+G FG V + G A+K+ + A E ++++ RH L +
Sbjct: 157 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 216
Query: 235 ISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPI 294
+ + V+EY G L ++ + R ++ SAL+YLH +
Sbjct: 217 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--SEKNV 273
Query: 295 IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVST 354
++ DLK N++LD + ++DF + K G T T Y+APE +
Sbjct: 274 VYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDNDYGR 331
Query: 355 NGDVYSFGIMLMETFTGKKP 374
D + G+++ E G+ P
Sbjct: 332 AVDWWGLGVVMYEMMCGRLP 351
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 20/176 (11%)
Query: 219 ECEMMKSIRHRNLIKVISTC----SNEEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQR 272
E +MK + H+N+I +++ S EEF+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERM 128
Query: 273 LNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 332
++ + +++LH SA IIH DLKPSN+++ + + DF +A+ S
Sbjct: 129 SYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMM 182
Query: 333 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW 388
T + T Y APE N D++S G ++ E G +F G + W
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG----GVLFPGTDHIDQW 234
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 23/217 (10%)
Query: 181 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 238 CSN----EEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ EEF+ LV+E M + LD + ++ + +++LH S
Sbjct: 130 FTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLH---S 182
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR 351
A IIH DLKPSN+++ + + DF +A+ S T + T Y APE
Sbjct: 183 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG 239
Query: 352 VSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW 388
N D++S G ++ E K +F G + W
Sbjct: 240 YKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 272
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 23/217 (10%)
Query: 181 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 238 C----SNEEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
S EEF+ +V+E M + LD + ++ + +++LH S
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLH---S 144
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR 351
A IIH DLKPSN+++ + + DF +A+ S T + T Y APE
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPEVVTRYYRAPEVILGMG 201
Query: 352 VSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW 388
N D++S G ++ E G +F G + W
Sbjct: 202 YKENVDIWSVGCIMGEMIKG----GVLFPGTDHIDQW 234
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 20/176 (11%)
Query: 219 ECEMMKSIRHRNLIKVISTC----SNEEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQR 272
E +MK + H+N+I +++ S EEF+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERM 128
Query: 273 LNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 332
++ + +++LH SA IIH DLKPSN+++ + + DF +A+ S
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 182
Query: 333 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW 388
T + T Y APE N D++S G ++ E G +F G + W
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG----GVLFPGTDHIDQW 234
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 90/214 (42%), Gaps = 23/214 (10%)
Query: 172 TDGFSENNLIGRGGFGSVY--KARLGDGMEVAVKVFNLQCGRALKGFDV---ECEMMKSI 226
+D + +G G +G V K +L G E A+K+ E ++K +
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLN---IMIDVASAL 283
H N++K+ ++ LV+E G L + + F ++ IM V S
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGEL----FDEIILRQKFSEVDAAVIMKQVLSGT 134
Query: 284 EYLHFGYSAPIIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTGEDQSMTQTQTLATIG 340
YLH I+H DLKP N+LL+ + + + DF ++ + + L T
Sbjct: 135 TYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLGTAY 188
Query: 341 YMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
Y+APE R+ + DV+S G++L G P
Sbjct: 189 YIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPP 221
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 30/207 (14%)
Query: 181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMM--KSIRHRNLIKVISTC 238
IG G FG R E+ V V ++ G A+ +V+ E++ +S+RH N+++
Sbjct: 28 IGSGNFGVARLMRDKLTKEL-VAVKYIERGAAIDE-NVQREIINHRSLRHPNIVRFKEVI 85
Query: 239 SNEEFKALVLEYMPHGSLEKYM-----YSSNYILDIFQRLNIMIDVASALEYLHFGYSAP 293
A+++EY G L + + +S + FQ+L S + Y H S
Sbjct: 86 LTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQL------LSGVSYCH---SMQ 136
Query: 294 IIHCDLKPSNVLLDDNMVAHLS--DFSIAKLLTGEDQSMTQTQTLATIG---YMAPEY-G 347
I H DLK N LLD + L DF +K S+ +Q +T+G Y+APE
Sbjct: 137 ICHRDLKLENTLLDGSPAPRLKICDFGYSK------SSVLHSQPKSTVGTPAYIAPEVLL 190
Query: 348 REGRVSTNGDVYSFGIMLMETFTGKKP 374
R+ DV+S G+ L G P
Sbjct: 191 RQEYDGKIADVWSCGVTLYVMLVGAYP 217
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 23/217 (10%)
Query: 181 IGRGGFGSV---YKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVIST 237
IG G G V Y A L + + Q K E +MK + H+N+I +++
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 238 CSN----EEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ EEF+ LV+E M + LD + ++ + +++LH S
Sbjct: 130 FTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLH---S 182
Query: 292 APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR 351
A IIH DLKPSN+++ + + DF +A+ S T + T Y APE
Sbjct: 183 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG 239
Query: 352 VSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW 388
N D++S G ++ E K +F G + W
Sbjct: 240 YKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 272
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 173 DGFSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQ----CGRALKGFDVECE--MMKS 225
D + +G G F V K R G++ A K + R + D+E E ++K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEY 285
I+H N+I + N+ L+ E + G L ++ + + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 286 LHFGYSAPIIHCDLKPSNVLLDDNMVA----HLSDFSIAKLLTGEDQSMTQTQTLATIGY 341
LH S I H DLKP N++L D V + DF +A + D T +
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEF 183
Query: 342 MAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
+APE + D++S G++ +G P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 81/213 (38%), Gaps = 13/213 (6%)
Query: 173 DGFSENNLIGRGGFGSVYK-ARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNL 231
D + + +G G FG V++ G A K + E + M +RH L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 232 IKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS 291
+ + ++ ++ E+M G L + + + + + + M V L ++H
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---E 167
Query: 292 APIIHCDLKPSNVLLDDNMVAHLS--DFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE 349
+H DLKP N++ L DF + L D + T T + APE
Sbjct: 168 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFAAPEVAEG 224
Query: 350 GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGE 382
V D++S G++ +G P F GE
Sbjct: 225 KPVGYYTDMWSVGVLSYILLSGLSP----FGGE 253
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 38/226 (16%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCGRALKGFDVECEMM- 223
L + +D + IG G FG R E VAVK ++ G + +V+ E++
Sbjct: 12 LPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKY--IERGEKIAA-NVKREIIN 68
Query: 224 -KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYM-----YSSNYILDIFQRLNIMI 277
+S+RH N+++ A+V+EY G L + + +S + FQ+L
Sbjct: 69 HRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL---- 124
Query: 278 DVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLS--DFSIAKLLTGEDQSMTQTQT 335
S + Y H + + H DLK N LLD + L DF +K S+ +Q
Sbjct: 125 --ISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK------SSVLHSQP 173
Query: 336 LATIG---YMAPEY----GREGRVSTNGDVYSFGIMLMETFTGKKP 374
+T+G Y+APE +G+V+ DV+S G+ L G P
Sbjct: 174 KSTVGTPAYIAPEVLLKKEYDGKVA---DVWSCGVTLYVMLVGAYP 216
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 84/199 (42%), Gaps = 16/199 (8%)
Query: 175 FSENNLIGRGGFGSVYKARLG-DGMEVAVK----VFNLQCGRALKGFDVECEMMKSIRHR 229
F + +G G +G V+K R DG AVK F RA K +V K +H
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHE-KVGQHP 117
Query: 230 NLIKVISTCSNEEFKALVLEYMPHG-SLEKYMYSSNYILDIFQRLNIMIDVASALEYLHF 288
+++ EE L L+ G SL+++ + L Q + D AL +LH
Sbjct: 118 CCVRLEQAW--EEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH- 174
Query: 289 GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
S ++H D+KP+N+ L L DF + L Q YMAPE
Sbjct: 175 --SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE---GDPRYMAPEL-L 228
Query: 349 EGRVSTNGDVYSFGIMLME 367
+G T DV+S G+ ++E
Sbjct: 229 QGSYGTAADVFSLGLTILE 247
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 102/248 (41%), Gaps = 35/248 (14%)
Query: 173 DGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKV-----FNLQCGRALKGFDVECEMMKSI 226
D + +IG+G F V + G + AVK+ F G + + E + +
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASA---- 282
+H ++++++ T S++ +V E+M L +I +R + + A
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADL---------CFEIVKRADAGFVYSEAVASH 136
Query: 283 -----LEYLHFGYSAPIIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGEDQSMTQTQ 334
LE L + + IIH D+KP VLL +++ L F +A L + +
Sbjct: 137 YMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG--ESGLVAGG 194
Query: 335 TLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP----TNEIFNGEMTLKHWVN 390
+ T +MAPE + DV+ G++L +G P +F G + K+ +N
Sbjct: 195 RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMN 254
Query: 391 --DWLPIS 396
W IS
Sbjct: 255 PRQWSHIS 262
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 20/176 (11%)
Query: 219 ECEMMKSIRHRNLIKVISTC----SNEEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQR 272
E +MK + H+N+I +++ S EEF+ +V+E M + LD +
Sbjct: 74 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERM 129
Query: 273 LNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 332
++ + +++LH SA IIH DLKPSN+++ + + DF +A+ S
Sbjct: 130 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 183
Query: 333 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW 388
T + T Y APE N D++S G ++ E G +F G + W
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG----GVLFPGTDHIDQW 235
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 29/187 (15%)
Query: 175 FSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQ-----C---GRALKGFDVECEMMKS 225
+S + +G G FG V+ A + EV VK + C L +E ++
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 226 IRHRNLIKVISTCSNEEFKALVLEYMPHGS-LEKYMYSSNYILDIFQRLN------IMID 278
+ H N+IKV+ N+ F LV+E HGS L+ + + +D RL+ I
Sbjct: 86 VEHANIIKVLDIFENQGFFQLVME--KHGSGLDLFAF-----IDRHPRLDEPLASYIFRQ 138
Query: 279 VASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLAT 338
+ SA+ YL IIH D+K N+++ ++ L DF A L ++ T
Sbjct: 139 LVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL---ERGKLFYTFCGT 192
Query: 339 IGYMAPE 345
I Y APE
Sbjct: 193 IEYCAPE 199
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 20/176 (11%)
Query: 219 ECEMMKSIRHRNLIKVISTC----SNEEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQR 272
E +MK + H+N+I +++ S EEF+ +V+E M + LD +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERM 128
Query: 273 LNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 332
++ + +++LH SA IIH DLKPSN+++ + + DF +A+ S
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 182
Query: 333 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW 388
T + T Y APE N D++S G ++ E G +F G + W
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG----GVLFPGTDHIDQW 234
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 9/204 (4%)
Query: 175 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFD---VECEMMKSIRHRN 230
F L+G+G FG V + G A+K+ + A E ++++ RH
Sbjct: 10 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 69
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGY 290
L + + + V+EY G L ++ + R ++ SAL+YLH
Sbjct: 70 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--S 126
Query: 291 SAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG 350
+++ DLK N++LD + ++DF + K G T T Y+APE +
Sbjct: 127 EKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDN 184
Query: 351 RVSTNGDVYSFGIMLMETFTGKKP 374
D + G+++ E G+ P
Sbjct: 185 DYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 95/226 (42%), Gaps = 23/226 (10%)
Query: 180 LIGRGGFGSVYKA-RLGDGMEVAVKVFNL----QCGRALKGFDVECE--MMKSIRH--RN 230
L+G GGFGSVY R+ D + VA+K G G V E ++K +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 231 LIKVISTCSNEEFKALVLEY-MPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFG 289
+I+++ + L+LE P L ++ + + R + V A+ + H
Sbjct: 75 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCH-- 131
Query: 290 YSAPIIHCDLKPSNVLLDDNMVA-HLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
+ ++H D+K N+L+D N L DF LL + T T Y PE+ R
Sbjct: 132 -NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIR 186
Query: 349 EGRV-STNGDVYSFGIMLMETFTGKKP---TNEIFNGEMTLKHWVN 390
R + V+S GI+L + G P EI G++ + V+
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 232
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 9/204 (4%)
Query: 175 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFD---VECEMMKSIRHRN 230
F L+G+G FG V + G A+K+ + A E ++++ RH
Sbjct: 12 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 71
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGY 290
L + + + V+EY G L ++ + R ++ SAL+YLH
Sbjct: 72 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--S 128
Query: 291 SAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG 350
+++ DLK N++LD + ++DF + K G T T Y+APE +
Sbjct: 129 EKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDN 186
Query: 351 RVSTNGDVYSFGIMLMETFTGKKP 374
D + G+++ E G+ P
Sbjct: 187 DYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 95/226 (42%), Gaps = 23/226 (10%)
Query: 180 LIGRGGFGSVYKA-RLGDGMEVAVKVFNL----QCGRALKGFDVECE--MMKSIRH--RN 230
L+G GGFGSVY R+ D + VA+K G G V E ++K +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 231 LIKVISTCSNEEFKALVLEY-MPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFG 289
+I+++ + L+LE P L ++ + + R + V A+ + H
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCH-- 132
Query: 290 YSAPIIHCDLKPSNVLLDDNMVA-HLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
+ ++H D+K N+L+D N L DF LL + T T Y PE+ R
Sbjct: 133 -NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIR 187
Query: 349 EGRV-STNGDVYSFGIMLMETFTGKKP---TNEIFNGEMTLKHWVN 390
R + V+S GI+L + G P EI G++ + V+
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 233
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 95/226 (42%), Gaps = 23/226 (10%)
Query: 180 LIGRGGFGSVYKA-RLGDGMEVAVKVFNL----QCGRALKGFDVECE--MMKSIRH--RN 230
L+G GGFGSVY R+ D + VA+K G G V E ++K +
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 231 LIKVISTCSNEEFKALVLEY-MPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFG 289
+I+++ + L+LE P L ++ + + R + V A+ + H
Sbjct: 98 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCH-- 154
Query: 290 YSAPIIHCDLKPSNVLLDDNMVA-HLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
+ ++H D+K N+L+D N L DF LL + T T Y PE+ R
Sbjct: 155 -NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIR 209
Query: 349 EGRV-STNGDVYSFGIMLMETFTGKKP---TNEIFNGEMTLKHWVN 390
R + V+S GI+L + G P EI G++ + V+
Sbjct: 210 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 255
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 95/226 (42%), Gaps = 23/226 (10%)
Query: 180 LIGRGGFGSVYKA-RLGDGMEVAVKVFNL----QCGRALKGFDVECE--MMKSIRH--RN 230
L+G GGFGSVY R+ D + VA+K G G V E ++K +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 231 LIKVISTCSNEEFKALVLEY-MPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFG 289
+I+++ + L+LE P L ++ + + R + V A+ + H
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCH-- 127
Query: 290 YSAPIIHCDLKPSNVLLDDNMVA-HLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
+ ++H D+K N+L+D N L DF LL + T T Y PE+ R
Sbjct: 128 -NXGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIR 182
Query: 349 EGRV-STNGDVYSFGIMLMETFTGKKP---TNEIFNGEMTLKHWVN 390
R + V+S GI+L + G P EI G++ + V+
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 228
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 95/226 (42%), Gaps = 23/226 (10%)
Query: 180 LIGRGGFGSVYKA-RLGDGMEVAVKVFNL----QCGRALKGFDVECE--MMKSIRH--RN 230
L+G GGFGSVY R+ D + VA+K G G V E ++K +
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 231 LIKVISTCSNEEFKALVLEY-MPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFG 289
+I+++ + L+LE P L ++ + + R + V A+ + H
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCH-- 130
Query: 290 YSAPIIHCDLKPSNVLLDDNMVA-HLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
+ ++H D+K N+L+D N L DF LL + T T Y PE+ R
Sbjct: 131 -NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIR 185
Query: 349 EGRV-STNGDVYSFGIMLMETFTGKKP---TNEIFNGEMTLKHWVN 390
R + V+S GI+L + G P EI G++ + V+
Sbjct: 186 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 231
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 9/204 (4%)
Query: 175 FSENNLIGRGGFGSVYKAR-LGDGMEVAVKVFNLQCGRALKGFD---VECEMMKSIRHRN 230
F L+G+G FG V + G A+K+ + A E ++++ RH
Sbjct: 11 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 70
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGY 290
L + + + V+EY G L ++ + R ++ SAL+YLH
Sbjct: 71 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--S 127
Query: 291 SAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG 350
+++ DLK N++LD + ++DF + K G T T Y+APE +
Sbjct: 128 EKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDN 185
Query: 351 RVSTNGDVYSFGIMLMETFTGKKP 374
D + G+++ E G+ P
Sbjct: 186 DYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 102/248 (41%), Gaps = 35/248 (14%)
Query: 173 DGFSENNLIGRGGFGSVYKA-RLGDGMEVAVKV-----FNLQCGRALKGFDVECEMMKSI 226
D + +IG+G F V + G + AVK+ F G + + E + +
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASA---- 282
+H ++++++ T S++ +V E+M L +I +R + + A
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADL---------CFEIVKRADAGFVYSEAVASH 134
Query: 283 -----LEYLHFGYSAPIIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGEDQSMTQTQ 334
LE L + + IIH D+KP VLL +++ L F +A L + +
Sbjct: 135 YMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG--ESGLVAGG 192
Query: 335 TLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP----TNEIFNGEMTLKHWVN 390
+ T +MAPE + DV+ G++L +G P +F G + K+ +N
Sbjct: 193 RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMN 252
Query: 391 --DWLPIS 396
W IS
Sbjct: 253 PRQWSHIS 260
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 95/226 (42%), Gaps = 23/226 (10%)
Query: 180 LIGRGGFGSVYKA-RLGDGMEVAVKVFNL----QCGRALKGFDVECE--MMKSIRH--RN 230
L+G GGFGSVY R+ D + VA+K G G V E ++K +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 231 LIKVISTCSNEEFKALVLEY-MPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFG 289
+I+++ + L+LE P L ++ + + R + V A+ + H
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCH-- 127
Query: 290 YSAPIIHCDLKPSNVLLDDNMVA-HLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
+ ++H D+K N+L+D N L DF LL + T T Y PE+ R
Sbjct: 128 -NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIR 182
Query: 349 EGRV-STNGDVYSFGIMLMETFTGKKP---TNEIFNGEMTLKHWVN 390
R + V+S GI+L + G P EI G++ + V+
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 228
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 20/176 (11%)
Query: 219 ECEMMKSIRHRNLIKVISTC----SNEEFKA--LVLEYMPHGSLEKYMYSSNYILDIFQR 272
E +MK + H+N+I +++ S EEF+ +V+E M + LD +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERM 128
Query: 273 LNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 332
++ + +++LH SA IIH DLKPSN+++ + + DF +A+ S
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 182
Query: 333 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW 388
T + T Y APE N D++S G ++ E G +F G + W
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG----GVLFPGTDHIDQW 234
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 95/226 (42%), Gaps = 23/226 (10%)
Query: 180 LIGRGGFGSVYKA-RLGDGMEVAVKVFNL----QCGRALKGFDVECE--MMKSIRH--RN 230
L+G GGFGSVY R+ D + VA+K G G V E ++K +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 231 LIKVISTCSNEEFKALVLEY-MPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFG 289
+I+++ + L+LE P L ++ + + R + V A+ + H
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCH-- 127
Query: 290 YSAPIIHCDLKPSNVLLDDNMVA-HLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
+ ++H D+K N+L+D N L DF LL + T T Y PE+ R
Sbjct: 128 -NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIR 182
Query: 349 EGRV-STNGDVYSFGIMLMETFTGKKP---TNEIFNGEMTLKHWVN 390
R + V+S GI+L + G P EI G++ + V+
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS 228
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 95/226 (42%), Gaps = 23/226 (10%)
Query: 180 LIGRGGFGSVYKA-RLGDGMEVAVKVFNL----QCGRALKGFDVECE--MMKSIRH--RN 230
L+G GGFGSVY R+ D + VA+K G G V E ++K +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 231 LIKVISTCSNEEFKALVLEY-MPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFG 289
+I+++ + L+LE P L ++ + + R + V A+ + H
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCH-- 132
Query: 290 YSAPIIHCDLKPSNVLLDDNMVA-HLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
+ ++H D+K N+L+D N L DF LL + T T Y PE+ R
Sbjct: 133 -NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIR 187
Query: 349 EGRV-STNGDVYSFGIMLMETFTGKKP---TNEIFNGEMTLKHWVN 390
R + V+S GI+L + G P EI G++ + V+
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 233
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 95/226 (42%), Gaps = 23/226 (10%)
Query: 180 LIGRGGFGSVYKA-RLGDGMEVAVKVFNL----QCGRALKGFDVECE--MMKSIRH--RN 230
L+G GGFGSVY R+ D + VA+K G G V E ++K +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 231 LIKVISTCSNEEFKALVLEY-MPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFG 289
+I+++ + L+LE P L ++ + + R + V A+ + H
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCH-- 132
Query: 290 YSAPIIHCDLKPSNVLLDDNMVA-HLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348
+ ++H D+K N+L+D N L DF LL + T T Y PE+ R
Sbjct: 133 -NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIR 187
Query: 349 EGRV-STNGDVYSFGIMLMETFTGKKP---TNEIFNGEMTLKHWVN 390
R + V+S GI+L + G P EI G++ + V+
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 233
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 275 IMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTGEDQSMT 331
IM + A++YLH S I H D+KP N+L N + L+DF AK T + +
Sbjct: 120 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---S 173
Query: 332 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
T+ T Y+APE + + D++S G+++ G P
Sbjct: 174 LTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 89/222 (40%), Gaps = 33/222 (14%)
Query: 181 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSI----RHRN 230
+G G FG V +A + M VAVK+ L+ L + +K + H N
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKM--LKPSAHLTEREALMSELKVLSYLGNHMN 104
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKY-----------------MYSSNYILDIFQRL 273
++ ++ C+ ++ EY +G L + M LD+ L
Sbjct: 105 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 164
Query: 274 NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 333
+ VA + +L S IH DL N+LL + + DF +A+ + + + +
Sbjct: 165 SFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 221
Query: 334 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 374
+ +MAPE + DV+S+GI L E F+ G P
Sbjct: 222 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 263
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 89/222 (40%), Gaps = 33/222 (14%)
Query: 181 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSI----RHRN 230
+G G FG V +A + M VAVK+ L+ L + +K + H N
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKM--LKPSAHLTEREALMSELKVLSYLGNHMN 111
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKY-----------------MYSSNYILDIFQRL 273
++ ++ C+ ++ EY +G L + M LD+ L
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 274 NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 333
+ VA + +L S IH DL N+LL + + DF +A+ + + + +
Sbjct: 172 SFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKG 228
Query: 334 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 374
+ +MAPE + DV+S+GI L E F+ G P
Sbjct: 229 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 89/222 (40%), Gaps = 33/222 (14%)
Query: 181 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSI----RHRN 230
+G G FG V +A + M VAVK+ L+ L + +K + H N
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKM--LKPSAHLTEREALMSELKVLSYLGNHMN 106
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKY-----------------MYSSNYILDIFQRL 273
++ ++ C+ ++ EY +G L + M LD+ L
Sbjct: 107 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 166
Query: 274 NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 333
+ VA + +L S IH DL N+LL + + DF +A+ + + + +
Sbjct: 167 SFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 223
Query: 334 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 374
+ +MAPE + DV+S+GI L E F+ G P
Sbjct: 224 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 265
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 100/228 (43%), Gaps = 38/228 (16%)
Query: 164 SHLELCRATDGFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCGRALKGFDVECEM 222
+ L + +D + IG G FG R E VAVK ++ G + +V+ E+
Sbjct: 9 ADLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKY--IERGEKIDE-NVKREI 65
Query: 223 M--KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYM-----YSSNYILDIFQRLNI 275
+ +S+RH N+++ A+V+EY G L + + +S + FQ+L
Sbjct: 66 INHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL-- 123
Query: 276 MIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLS--DFSIAKLLTGEDQSMTQT 333
S + Y H + + H DLK N LLD + L DF +K S+ +
Sbjct: 124 ----ISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK------SSVLHS 170
Query: 334 QTLATIG---YMAPEY----GREGRVSTNGDVYSFGIMLMETFTGKKP 374
Q +T+G Y+APE +G+V+ DV+S G+ L G P
Sbjct: 171 QPKSTVGTPAYIAPEVLLKKEYDGKVA---DVWSCGVTLYVMLVGAYP 215
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 89/222 (40%), Gaps = 33/222 (14%)
Query: 181 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSI----RHRN 230
+G G FG V +A + M VAVK+ L+ L + +K + H N
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKM--LKPSAHLTEREALMSELKVLSYLGNHMN 88
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKY-----------------MYSSNYILDIFQRL 273
++ ++ C+ ++ EY +G L + M LD+ L
Sbjct: 89 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148
Query: 274 NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 333
+ VA + +L S IH DL N+LL + + DF +A+ + + + +
Sbjct: 149 SFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 205
Query: 334 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 374
+ +MAPE + DV+S+GI L E F+ G P
Sbjct: 206 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 247
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 32/223 (14%)
Query: 166 LELCRATDGFSENNLIGRGGFGSVYKARLGDGME-VAVKVFNLQCGRALKGFDVECEMM- 223
L + +D + IG G FG R E VAVK ++ G + +V+ E++
Sbjct: 12 LPIMHDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKY--IERGEKIDE-NVKREIIN 68
Query: 224 -KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYM-----YSSNYILDIFQRLNIMI 277
+S+RH N+++ A+V+EY G L + + +S + FQ+L
Sbjct: 69 HRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL---- 124
Query: 278 DVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHL--SDFSIAKLLTGEDQSMTQTQT 335
S + Y H + + H DLK N LLD + L +DF +K Q +
Sbjct: 125 --ISGVSYAH---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKS---A 176
Query: 336 LATIGYMAPEY----GREGRVSTNGDVYSFGIMLMETFTGKKP 374
+ T Y+APE +G+V+ DV+S G+ L G P
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVA---DVWSCGVTLYVMLVGAYP 216
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 90/214 (42%), Gaps = 23/214 (10%)
Query: 172 TDGFSENNLIGRGGFGSVY--KARLGDGMEVAVKVFNLQCGRALKGFDV---ECEMMKSI 226
+D + +G G +G V K +L G E A+K+ E ++K +
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLN---IMIDVASAL 283
H N++K+ ++ LV+E G L + + F ++ IM V S
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGEL----FDEIILRQKFSEVDAAVIMKQVLSGT 117
Query: 284 EYLHFGYSAPIIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTGEDQSMTQTQTLATIG 340
YLH I+H DLKP N+LL+ + + + DF ++ + + L T
Sbjct: 118 TYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLGTAY 171
Query: 341 YMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374
Y+APE R+ + DV+S G++L G P
Sbjct: 172 YIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPP 204
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 89/222 (40%), Gaps = 33/222 (14%)
Query: 181 IGRGGFGSVYKA------RLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSI----RHRN 230
+G G FG V +A + M VAVK+ L+ L + +K + H N
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKM--LKPSAHLTEREALMSELKVLSYLGNHMN 111
Query: 231 LIKVISTCSNEEFKALVLEYMPHGSLEKY-----------------MYSSNYILDIFQRL 273
++ ++ C+ ++ EY +G L + M LD+ L
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 274 NIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 333
+ VA + +L S IH DL N+LL + + DF +A+ + + + +
Sbjct: 172 SFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 228
Query: 334 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 374
+ +MAPE + DV+S+GI L E F+ G P
Sbjct: 229 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 94/248 (37%), Gaps = 60/248 (24%)
Query: 181 IGRGGFGSVYKARLGDGMEV-AVKVFNLQCGRALKGFDVE-----CEMMKSIRHRNLIKV 234
IG+G +G V A + A+K+ N R + DVE +MK + H N+ ++
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 235 ISTCSNEEFKALVLEYMPHG------------------------------------SLEK 258
+E++ LV+E + HG ++
Sbjct: 94 YEVYEDEQYICLVME-LCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAING 152
Query: 259 YMYSSNYILDIFQR----LNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDN--MVA 312
++ LD QR NIM + SAL YLH + I H D+KP N L N
Sbjct: 153 SIHGFRESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEI 209
Query: 313 HLSDFSIA----KLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS--TNGDVYSFGIMLM 366
L DF ++ KL GE MT T ++APE S D +S G++L
Sbjct: 210 KLVDFGLSKEFYKLNNGEYYGMTTKA--GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLH 267
Query: 367 ETFTGKKP 374
G P
Sbjct: 268 LLLMGAVP 275
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,535,033
Number of Sequences: 62578
Number of extensions: 549134
Number of successful extensions: 3610
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 358
Number of HSP's that attempted gapping in prelim test: 1404
Number of HSP's gapped (non-prelim): 1170
length of query: 470
length of database: 14,973,337
effective HSP length: 102
effective length of query: 368
effective length of database: 8,590,381
effective search space: 3161260208
effective search space used: 3161260208
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)